Query         044707
Match_columns 376
No_of_seqs    414 out of 3059
Neff          8.6 
Searched_HMMs 29240
Date          Mon Mar 25 10:09:57 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044707hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 5.7E-50   2E-54  377.1  16.0  214  147-375    13-280 (299)
  2 3omv_A RAF proto-oncogene seri 100.0 2.1E-49 7.3E-54  373.9  18.3  213  147-376    36-292 (307)
  3 4aoj_A High affinity nerve gro 100.0 2.6E-49   9E-54  377.4  18.2  215  147-376    41-311 (329)
  4 4b9d_A Serine/threonine-protei 100.0 2.7E-49 9.3E-54  378.7  16.5  214  146-376    23-275 (350)
  5 4gt4_A Tyrosine-protein kinase 100.0   2E-49 6.9E-54  374.9  15.1  212  149-376    28-298 (308)
  6 4fih_A Serine/threonine-protei 100.0 4.1E-48 1.4E-52  370.0  17.3  212  147-376    74-322 (346)
  7 4fie_A Serine/threonine-protei 100.0 9.4E-48 3.2E-52  376.3  18.5  212  147-376   151-399 (423)
  8 4aw0_A HPDK1, 3-phosphoinositi 100.0   5E-48 1.7E-52  364.3  14.7  209  147-375    32-282 (311)
  9 3fpq_A Serine/threonine-protei 100.0 5.2E-48 1.8E-52  361.8  13.7  210  150-376    29-281 (290)
 10 3hyh_A Carbon catabolite-derep 100.0   3E-47   1E-51  353.8  15.3  209  147-376    13-261 (275)
 11 4g3f_A NF-kappa-beta-inducing  100.0 8.1E-48 2.8E-52  366.8  11.1  209  147-375    58-307 (336)
 12 3hmm_A TGF-beta receptor type- 100.0 4.8E-47 1.6E-51  358.3  12.6  216  148-376     4-289 (303)
 13 4ase_A Vascular endothelial gr 100.0 1.1E-46 3.9E-51  362.2  11.9  217  146-376    63-339 (353)
 14 3ubd_A Ribosomal protein S6 ki 100.0 8.8E-47   3E-51  355.3   9.9  206  147-372    24-271 (304)
 15 4g31_A Eukaryotic translation  100.0 2.6E-45 8.8E-50  345.6  14.9  213  147-376     5-278 (299)
 16 4b99_A Mitogen-activated prote 100.0 2.7E-43 9.2E-48  344.1  20.2  221  147-376    54-343 (398)
 17 3uim_A Brassinosteroid insensi 100.0 5.4E-43 1.9E-47  332.4  17.8  244  131-376    14-303 (326)
 18 2qkw_B Protein kinase; three-h 100.0 9.1E-43 3.1E-47  330.6  18.1  236  136-376    28-307 (321)
 19 4f9c_A Cell division cycle 7-r 100.0 1.6E-42 5.6E-47  334.8  19.6  166  142-318    16-250 (361)
 20 3v5w_A G-protein coupled recep 100.0 4.4E-42 1.5E-46  351.3  15.6  209  146-372   188-439 (689)
 21 3uto_A Twitchin; kinase, muscl 100.0 7.8E-42 2.7E-46  348.8  17.3  215  146-376   156-409 (573)
 22 2nru_A Interleukin-1 receptor- 100.0 1.1E-40 3.8E-45  313.7  22.1  238  132-376    10-298 (307)
 23 3fxz_A Serine/threonine-protei 100.0 1.9E-40 6.6E-45  311.7  17.9  213  146-376    19-268 (297)
 24 2c30_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44  313.1  19.5  224  135-376    23-293 (321)
 25 3fe3_A MAP/microtubule affinit 100.0 1.5E-40 5.3E-45  317.2  15.7  211  146-376    14-263 (328)
 26 3zgw_A Maternal embryonic leuc 100.0 2.6E-40 8.9E-45  318.0  14.8  211  146-376     9-259 (347)
 27 3s95_A LIMK-1, LIM domain kina 100.0 3.2E-40 1.1E-44  311.3  14.9  215  146-376     9-274 (310)
 28 3kul_A Ephrin type-A receptor  100.0 3.7E-40 1.3E-44  313.8  15.4  213  146-376    48-305 (325)
 29 3tki_A Serine/threonine-protei 100.0 7.2E-40 2.5E-44  311.6  17.1  214  146-376     6-260 (323)
 30 1tki_A Titin; serine kinase, m 100.0 7.7E-40 2.6E-44  311.3  16.8  215  146-376     4-256 (321)
 31 2qol_A Ephrin receptor; recept 100.0 4.3E-40 1.5E-44  319.5  14.8  213  146-376    44-301 (373)
 32 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-40 5.1E-45  323.0  11.3  213  146-376   113-366 (377)
 33 3p86_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44  308.5  16.3  214  146-376    36-290 (309)
 34 3kmu_A ILK, integrin-linked ki 100.0 6.3E-40 2.2E-44  302.1  14.2  213  146-376     9-262 (271)
 35 4hcu_A Tyrosine-protein kinase 100.0 1.4E-39 4.7E-44  300.7  16.2  211  147-376    10-258 (269)
 36 2psq_A Fibroblast growth facto 100.0 1.4E-39 4.8E-44  315.5  16.6  215  146-376    80-356 (370)
 37 3ugc_A Tyrosine-protein kinase 100.0 7.6E-40 2.6E-44  306.5  13.8  224  146-376     9-283 (295)
 38 2yab_A Death-associated protei 100.0 2.6E-39 8.8E-44  312.7  17.4  215  146-376    11-271 (361)
 39 1opk_A P150, C-ABL, proto-onco 100.0 7.6E-40 2.6E-44  329.2  13.8  212  146-376   219-470 (495)
 40 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.8E-39   6E-44  299.6  14.9  212  146-376     7-256 (268)
 41 2zv2_A Calcium/calmodulin-depe 100.0 2.8E-39 9.6E-44  303.2  16.5  212  146-376    12-291 (298)
 42 2w4o_A Calcium/calmodulin-depe 100.0 3.2E-39 1.1E-43  310.5  17.3  216  146-376    52-304 (349)
 43 3gni_B Strad alpha; kinase fol 100.0 2.7E-39 9.1E-44  315.0  16.7  225  146-376    24-332 (389)
 44 1luf_A Muscle-specific tyrosin 100.0 2.3E-39   8E-44  309.1  16.0  217  145-376    45-327 (343)
 45 3o0g_A Cell division protein k 100.0 4.2E-39 1.4E-43  301.1  17.4  222  147-376     2-281 (292)
 46 3gen_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43  299.9  16.6  212  146-376    23-272 (283)
 47 1nxk_A MAP kinase-activated pr 100.0 2.2E-39 7.6E-44  317.3  15.8  218  146-376    60-320 (400)
 48 2bdw_A Hypothetical protein K1 100.0 6.7E-39 2.3E-43  309.8  18.8  216  145-376    27-283 (362)
 49 3poz_A Epidermal growth factor 100.0 1.8E-39   6E-44  309.2  14.4  210  146-376    14-270 (327)
 50 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-39 4.3E-44  311.9  13.3  210  146-376     8-257 (336)
 51 2eue_A Carbon catabolite derep 100.0 4.7E-39 1.6E-43  298.1  16.7  210  146-376    12-261 (275)
 52 3qd2_B Eukaryotic translation  100.0 3.4E-39 1.2E-43  305.9  15.9  213  146-376     5-324 (332)
 53 2y0a_A Death-associated protei 100.0 3.2E-39 1.1E-43  307.4  15.8  214  146-376    10-270 (326)
 54 1o6l_A RAC-beta serine/threoni 100.0 2.3E-39   8E-44  310.2  14.9  210  146-375     4-258 (337)
 55 3llt_A Serine/threonine kinase 100.0 2.8E-39 9.6E-44  311.2  15.4  234  136-376    24-354 (360)
 56 1k9a_A Carboxyl-terminal SRC k 100.0 3.9E-39 1.3E-43  320.2  16.9  211  146-376   192-437 (450)
 57 3kn6_A Ribosomal protein S6 ki 100.0   4E-39 1.4E-43  306.8  16.1  210  152-376    16-269 (325)
 58 3uqc_A Probable conserved tran 100.0 3.5E-39 1.2E-43  301.9  15.3  212  146-376    30-257 (286)
 59 3p1a_A MYT1 kinase, membrane-a 100.0 6.9E-40 2.3E-44  309.8  10.4  210  146-376    56-303 (311)
 60 4eqm_A Protein kinase; transfe 100.0 7.5E-39 2.6E-43  300.3  17.4  215  146-375    10-266 (294)
 61 4euu_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43  301.9  19.0  225  147-376     9-301 (319)
 62 1qcf_A Haematopoetic cell kina 100.0 2.1E-39 7.3E-44  322.5  14.4  212  146-376   187-436 (454)
 63 3lb7_A RAF proto-oncogene seri 100.0 1.2E-38   4E-43  301.1  18.6  214  146-376    35-292 (307)
 64 3c0i_A Peripheral plasma membr 100.0 2.1E-39 7.1E-44  311.9  13.5  218  146-376    23-285 (351)
 65 4fr4_A YANK1, serine/threonine 100.0   4E-39 1.4E-43  313.7  15.2  212  146-375    14-269 (384)
 66 3kfa_A Tyrosine-protein kinase 100.0   3E-39   1E-43  300.9  13.7  213  146-376    12-263 (288)
 67 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.8E-39 9.7E-44  311.5  13.8  207  146-372    22-269 (353)
 68 3l9p_A Anaplastic lymphoma kin 100.0 2.7E-39 9.2E-44  313.1  13.7  216  146-376    70-337 (367)
 69 3vhe_A Vascular endothelial gr 100.0 1.3E-39 4.5E-44  313.0  11.4  226  137-376    12-347 (359)
 70 1ob3_A PFPK5, cell division co 100.0 1.5E-38 5.1E-43  297.0  18.2  221  147-376     2-279 (288)
 71 3fdn_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43  299.5  13.7  211  146-376     8-256 (279)
 72 3cok_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43  296.6  16.2  212  146-376    10-261 (278)
 73 1kob_A Twitchin; kinase, intra 100.0 1.8E-38   6E-43  309.6  19.2  216  146-376    50-303 (387)
 74 1fot_A TPK1 delta, CAMP-depend 100.0 5.3E-39 1.8E-43  305.2  15.1  210  146-375     5-256 (318)
 75 3niz_A Rhodanese family protei 100.0 7.9E-39 2.7E-43  302.7  16.2  222  146-376    20-299 (311)
 76 3is5_A Calcium-dependent prote 100.0 4.1E-39 1.4E-43  300.5  13.9  218  146-376    21-277 (285)
 77 3uc3_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43  310.4  15.0  214  146-376    19-273 (361)
 78 2ivs_A Proto-oncogene tyrosine 100.0 5.7E-39 1.9E-43  302.5  14.7  215  146-376    22-303 (314)
 79 1x8b_A WEE1HU, WEE1-like prote 100.0 3.6E-39 1.2E-43  299.3  13.1  214  146-376    10-278 (289)
 80 3soa_A Calcium/calmodulin-depe 100.0 1.3E-38 4.3E-43  316.0  17.7  216  145-376     9-266 (444)
 81 1u5q_A Serine/threonine protei 100.0 6.1E-39 2.1E-43  308.5  14.9  212  147-376    54-304 (348)
 82 3q4u_A Activin receptor type-1 100.0 1.1E-38 3.7E-43  298.8  16.2  215  146-376     7-294 (301)
 83 4agu_A Cyclin-dependent kinase 100.0 2.3E-38   8E-43  298.3  18.4  223  146-376     2-283 (311)
 84 4f0f_A Serine/threonine-protei 100.0 1.5E-38   5E-43  296.3  16.6  214  146-376    18-281 (287)
 85 1xjd_A Protein kinase C, theta 100.0 5.2E-39 1.8E-43  308.7  13.9  211  145-375    15-267 (345)
 86 1rjb_A FL cytokine receptor; k 100.0 8.9E-39 3.1E-43  305.6  15.4  217  146-376    44-326 (344)
 87 4fvq_A Tyrosine-protein kinase 100.0 2.9E-39   1E-43  301.2  11.7  212  146-376     7-267 (289)
 88 3nsz_A CK II alpha, casein kin 100.0 3.3E-38 1.1E-42  299.8  19.1  220  146-376    35-318 (330)
 89 3kk8_A Calcium/calmodulin depe 100.0 2.3E-38   8E-43  294.3  17.7  215  146-376     5-260 (284)
 90 2w5a_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43  299.1  11.8  216  146-376     5-266 (279)
 91 3soc_A Activin receptor type-2 100.0 6.1E-39 2.1E-43  304.8  13.8  223  146-376    23-310 (322)
 92 2izr_A Casein kinase I isoform 100.0 6.5E-39 2.2E-43  305.3  13.5  216  146-375     8-272 (330)
 93 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.8E-39   3E-43  307.7  14.5  210  146-375    40-291 (350)
 94 3dtc_A Mitogen-activated prote 100.0 1.7E-38 5.8E-43  293.2  15.8  210  146-376     6-265 (271)
 95 2yex_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43  293.0  16.7  214  146-376     6-260 (276)
 96 3qup_A Tyrosine-protein kinase 100.0 7.6E-39 2.6E-43  303.5  13.8  214  146-375    22-289 (323)
 97 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-38 5.1E-43  294.8  15.4  215  146-376     8-260 (277)
 98 3t9t_A Tyrosine-protein kinase 100.0 1.5E-38 5.1E-43  292.8  15.3  211  147-376     8-256 (267)
 99 4e5w_A Tyrosine-protein kinase 100.0 4.9E-39 1.7E-43  301.5  12.1  223  147-376    21-294 (302)
100 4aw2_A Serine/threonine-protei 100.0 8.2E-39 2.8E-43  316.5  14.2  226  137-376    64-337 (437)
101 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.1E-39 2.1E-43  319.0  13.3  212  146-376   183-432 (452)
102 2pmi_A Negative RE, cyclin-dep 100.0   5E-38 1.7E-42  297.8  18.9  226  146-376     4-292 (317)
103 3tt0_A Basic fibroblast growth 100.0 1.4E-38 4.7E-43  309.6  15.2  216  146-376    68-344 (382)
104 3ork_A Serine/threonine protei 100.0 4.2E-39 1.4E-43  304.1  11.1  214  146-375    11-271 (311)
105 2ozo_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43  328.6  15.0  203  154-376   343-590 (613)
106 1mp8_A Focal adhesion kinase 1 100.0 1.5E-38 5.1E-43  295.7  14.5  211  146-376    14-268 (281)
107 2rku_A Serine/threonine-protei 100.0 2.3E-38   8E-43  296.2  15.9  211  146-376    14-264 (294)
108 1csn_A Casein kinase-1; phosph 100.0 1.8E-38 6.1E-43  296.9  15.1  218  146-376     9-275 (298)
109 4dc2_A Protein kinase C IOTA t 100.0 1.4E-38 4.8E-43  311.0  14.9  210  146-372    51-307 (396)
110 3a8x_A Protein kinase C IOTA t 100.0 2.1E-38 7.1E-43  304.5  15.7  210  146-372     8-264 (345)
111 2j7t_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43  296.3  16.2  215  146-376    18-274 (302)
112 2y94_A 5'-AMP-activated protei 100.0 1.7E-38 5.8E-43  317.4  15.5  211  146-376    15-265 (476)
113 3pls_A Macrophage-stimulating  100.0 2.5E-38 8.5E-43  295.9  15.6  209  149-376    23-279 (298)
114 1t46_A HOMO sapiens V-KIT hard 100.0   1E-38 3.5E-43  300.6  13.0  217  146-376    22-299 (313)
115 3og7_A AKAP9-BRAF fusion prote 100.0 3.3E-38 1.1E-42  294.8  16.1  214  146-376    23-280 (289)
116 2eva_A TAK1 kinase - TAB1 chim 100.0 3.9E-38 1.3E-42  297.2  16.7  215  147-376     8-255 (307)
117 2owb_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43  302.1  15.5  211  146-376    40-290 (335)
118 2qr7_A Ribosomal protein S6 ki 100.0 1.7E-38 5.8E-43  304.8  14.1  217  146-376    21-276 (342)
119 2wqm_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42  296.8  16.3  219  146-376    31-289 (310)
120 2a2a_A Death-associated protei 100.0 2.5E-38 8.7E-43  300.1  15.0  215  146-376    11-271 (321)
121 2x4f_A Myosin light chain kina 100.0 1.8E-38 6.2E-43  308.1  14.3  210  152-376    94-341 (373)
122 2vgo_A Serine/threonine-protei 100.0 2.2E-38 7.5E-43  294.9  14.3  211  146-376    13-261 (284)
123 2clq_A Mitogen-activated prote 100.0 1.4E-37 4.8E-42  290.4  19.7  216  147-376    22-277 (295)
124 3eqc_A Dual specificity mitoge 100.0 2.9E-38 9.8E-43  304.3  15.4  224  146-376    32-323 (360)
125 4aaa_A Cyclin-dependent kinase 100.0   3E-38   1E-42  300.9  15.3  223  146-376    24-305 (331)
126 3hko_A Calcium/calmodulin-depe 100.0 1.3E-38 4.6E-43  304.3  12.9  223  142-376    21-329 (345)
127 1fvr_A Tyrosine-protein kinase 100.0 3.1E-38 1.1E-42  300.1  15.3  216  146-376    24-292 (327)
128 3m2w_A MAP kinase-activated pr 100.0 4.3E-38 1.5E-42  295.6  16.1  215  146-376    16-255 (299)
129 3a7i_A MST3 kinase, serine/thr 100.0 5.4E-38 1.8E-42  295.0  16.6  211  146-376    21-269 (303)
130 1t4h_A Serine/threonine-protei 100.0 2.4E-38 8.1E-43  295.6  14.1  211  149-376    28-281 (290)
131 3dls_A PAS domain-containing s 100.0 1.5E-38 5.3E-43  304.0  13.1  205  146-376    23-273 (335)
132 3mtl_A Cell division protein k 100.0 2.7E-38 9.3E-43  300.6  14.6  222  147-376     2-280 (324)
133 3kex_A Receptor tyrosine-prote 100.0 5.4E-39 1.9E-43  305.4   9.8  211  146-376    12-268 (325)
134 3op5_A Serine/threonine-protei 100.0   2E-38 6.8E-43  306.3  13.9  220  146-376    34-321 (364)
135 1mqb_A Ephrin type-A receptor  100.0 3.3E-38 1.1E-42  301.2  15.2  212  147-376    44-301 (333)
136 3lxl_A Tyrosine-protein kinase 100.0 8.5E-39 2.9E-43  304.0  11.0  224  146-376    22-295 (327)
137 4ejn_A RAC-alpha serine/threon 100.0 8.9E-39 3.1E-43  317.2  11.5  211  146-376   147-403 (446)
138 3com_A Serine/threonine-protei 100.0 6.9E-38 2.4E-42  295.5  16.9  215  146-376    28-277 (314)
139 3g33_A Cell division protein k 100.0 3.8E-38 1.3E-42  296.9  15.0  224  146-376     8-295 (308)
140 3an0_A Dual specificity mitoge 100.0 1.8E-38   6E-43  303.3  12.9  218  146-376    50-309 (340)
141 1qpc_A LCK kinase; alpha beta  100.0 3.2E-38 1.1E-42  292.9  14.2  212  146-376    12-261 (279)
142 2buj_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43  298.8  13.9  217  146-376    28-298 (317)
143 2h8h_A Proto-oncogene tyrosine 100.0 1.3E-38 4.5E-43  323.1  12.6  211  147-376   267-515 (535)
144 1p4o_A Insulin-like growth fac 100.0 8.3E-39 2.8E-43  302.9  10.3  218  144-376    22-291 (322)
145 3a62_A Ribosomal protein S6 ki 100.0 2.8E-38 9.5E-43  301.1  14.0  207  146-372    16-266 (327)
146 3lzb_A Epidermal growth factor 100.0   3E-38   1E-42  300.9  14.1  211  146-376    14-270 (327)
147 2i0e_A Protein kinase C-beta I 100.0 2.6E-38 8.7E-43  304.8  13.7  207  146-372    19-266 (353)
148 2h6d_A 5'-AMP-activated protei 100.0 2.2E-38 7.7E-43  293.2  12.8  211  146-376    10-260 (276)
149 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.6E-38 8.8E-43  301.4  13.5  222  146-376    33-317 (329)
150 1xbb_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42  294.3  14.5  211  146-376    15-271 (291)
151 2ac3_A MAP kinase-interacting  100.0 5.2E-38 1.8E-42  296.6  15.0  217  146-376    11-294 (316)
152 3lm5_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42  296.8  17.2  219  144-376    25-286 (327)
153 2pvf_A Fibroblast growth facto 100.0 4.1E-38 1.4E-42  300.3  14.3  216  146-376    34-310 (334)
154 1ua2_A CAK, cell division prot 100.0 9.1E-38 3.1E-42  299.6  16.6  225  144-376     7-290 (346)
155 3v8s_A RHO-associated protein  100.0 1.8E-38 6.2E-43  311.6  12.0  220  140-376    62-328 (410)
156 3fme_A Dual specificity mitoge 100.0 5.1E-38 1.8E-42  292.6  14.4  218  146-376     6-265 (290)
157 2h34_A Serine/threonine-protei 100.0 1.6E-37 5.4E-42  293.2  17.8  213  146-375    33-287 (309)
158 2vd5_A DMPK protein; serine/th 100.0 1.7E-38 5.8E-43  312.1  11.5  224  137-375    51-325 (412)
159 2i1m_A Macrophage colony-stimu 100.0 1.3E-38 4.6E-43  303.0  10.4  217  146-376    45-318 (333)
160 1u59_A Tyrosine-protein kinase 100.0 1.1E-37 3.6E-42  290.9  16.1  210  147-376     9-264 (287)
161 3bhy_A Death-associated protei 100.0 4.6E-38 1.6E-42  292.2  13.6  213  147-376     5-264 (283)
162 2vwi_A Serine/threonine-protei 100.0   4E-38 1.4E-42  295.0  13.2  223  146-376    14-286 (303)
163 3brb_A Proto-oncogene tyrosine 100.0 1.2E-37 3.9E-42  294.0  16.5  215  146-376    33-300 (313)
164 2r3i_A Cell division protein k 100.0   1E-37 3.5E-42  292.1  15.9  221  147-376     3-282 (299)
165 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-38 4.8E-43  301.8  10.1  219  142-376    19-285 (326)
166 1phk_A Phosphorylase kinase; g 100.0 2.2E-37 7.5E-42  289.7  17.9  215  146-376    16-282 (298)
167 2jam_A Calcium/calmodulin-depe 100.0   9E-38 3.1E-42  293.8  15.3  215  146-376     8-260 (304)
168 3f66_A Hepatocyte growth facto 100.0 1.3E-37 4.4E-42  291.5  16.2  211  147-376    25-283 (298)
169 2ycf_A Serine/threonine-protei 100.0 9.5E-38 3.3E-42  296.1  15.2  213  146-376     9-273 (322)
170 1byg_A CSK, protein (C-termina 100.0 3.4E-38 1.2E-42  292.8  11.7  211  146-376    20-265 (278)
171 3lxp_A Non-receptor tyrosine-p 100.0 3.4E-38 1.2E-42  299.0  11.8  219  149-376    33-302 (318)
172 2acx_A G protein-coupled recep 100.0 5.7E-38   2E-42  318.9  14.1  215  146-375   183-442 (576)
173 2wtk_C Serine/threonine-protei 100.0   1E-37 3.5E-42  292.9  14.9  212  146-376     4-262 (305)
174 2w1i_A JAK2; chromosomal rearr 100.0 7.6E-38 2.6E-42  297.5  14.0  224  146-376    40-314 (326)
175 3nyv_A Calmodulin-domain prote 100.0   9E-38 3.1E-42  312.9  15.2  215  146-376    25-280 (484)
176 1b6c_B TGF-B superfamily recep 100.0 2.8E-37 9.7E-42  294.5  17.9  218  143-376    38-328 (342)
177 4eut_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42  303.4  16.4  224  147-375     9-300 (396)
178 3c1x_A Hepatocyte growth facto 100.0 8.3E-38 2.8E-42  303.4  14.0  209  149-376    91-347 (373)
179 2r5t_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42  304.7  12.6  208  146-373    37-285 (373)
180 2y7j_A Phosphorylase B kinase  100.0 1.2E-37   4E-42  301.4  14.9  222  139-376    86-358 (365)
181 3cc6_A Protein tyrosine kinase 100.0 7.2E-38 2.5E-42  291.0  12.9  211  146-376    11-265 (281)
182 3dbq_A Dual specificity protei 100.0 1.1E-37 3.8E-42  298.7  14.4  210  146-376     8-272 (343)
183 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-37 5.5E-42  314.4  16.2  214  146-373   184-439 (543)
184 3i6u_A CDS1, serine/threonine- 100.0 5.9E-38   2E-42  309.0  12.6  215  144-376   132-398 (419)
185 2xir_A Vascular endothelial gr 100.0 4.4E-38 1.5E-42  296.7  11.1  225  138-376    18-302 (316)
186 3lij_A Calcium/calmodulin depe 100.0 1.3E-37 4.6E-42  312.7  15.0  215  146-376    36-290 (494)
187 4fl3_A Tyrosine-protein kinase 100.0 1.7E-37 5.7E-42  320.7  16.1  204  153-376   375-623 (635)
188 3q5i_A Protein kinase; CDPK, m 100.0 1.8E-37 6.2E-42  312.4  15.9  215  146-376    35-300 (504)
189 3eb0_A Putative uncharacterize 100.0   9E-38 3.1E-42  303.8  13.1  228  143-376     3-320 (383)
190 2yfx_A Tyrosine-protein kinase 100.0 1.4E-37 4.7E-42  295.7  14.0  216  146-376    29-296 (327)
191 1cm8_A Phosphorylated MAP kina 100.0 2.3E-37 7.9E-42  299.6  15.8  221  146-376    24-306 (367)
192 4hgt_A Casein kinase I isoform 100.0 9.7E-38 3.3E-42  291.4  12.4  216  145-376     7-272 (296)
193 3mdy_A Bone morphogenetic prot 100.0   5E-37 1.7E-41  292.0  17.3  220  144-376    34-323 (337)
194 3ttj_A Mitogen-activated prote 100.0 5.7E-37 1.9E-41  305.8  18.1  220  146-376    61-354 (464)
195 2v62_A Serine/threonine-protei 100.0 1.5E-37   5E-42  298.0  13.2  219  146-376    36-320 (345)
196 3mi9_A Cell division protein k 100.0 5.2E-37 1.8E-41  294.5  17.0  223  146-376    16-310 (351)
197 3mwu_A Calmodulin-domain prote 100.0 1.3E-37 4.6E-42  312.0  13.5  215  146-376    21-275 (486)
198 1z57_A Dual specificity protei 100.0 1.3E-36 4.4E-41  288.7  19.4  224  146-376    13-327 (339)
199 2zmd_A Dual specificity protei 100.0 2.1E-37 7.3E-42  302.2  14.4  209  147-376    56-319 (390)
200 3kvw_A DYRK2, dual specificity 100.0 8.2E-37 2.8E-41  301.7  18.7  164  146-316    96-300 (429)
201 3uzp_A CKI-delta, CKID, casein 100.0 1.8E-37 6.1E-42  289.9  13.2  215  146-376     8-272 (296)
202 3pg1_A Mitogen-activated prote 100.0 6.1E-37 2.1E-41  295.0  17.2  232  136-376    11-315 (362)
203 1vzo_A Ribosomal protein S6 ki 100.0 5.9E-38   2E-42  302.3  10.0  213  146-376    53-320 (355)
204 3oz6_A Mitogen-activated prote 100.0 5.3E-37 1.8E-41  298.8  16.8  223  144-376     6-327 (388)
205 3rp9_A Mitogen-activated prote 100.0 4.5E-37 1.5E-41  305.7  16.6  138  146-292    52-199 (458)
206 1wak_A Serine/threonine-protei 100.0 5.1E-37 1.8E-41  298.2  16.6  224  146-376    36-390 (397)
207 3e3p_A Protein kinase, putativ 100.0 8.1E-37 2.8E-41  293.6  17.7  232  140-376    16-313 (360)
208 3gxj_A TGF-beta receptor type- 100.0 3.5E-39 1.2E-43  302.2   0.8  215  146-376     2-289 (303)
209 2a19_B Interferon-induced, dou 100.0   3E-37   1E-41  286.4  13.6  208  146-376    10-266 (284)
210 2i6l_A Mitogen-activated prote 100.0 1.2E-36   4E-41  286.9  17.1  221  146-376    10-304 (320)
211 1zy4_A Serine/threonine-protei 100.0 5.9E-37   2E-41  286.5  14.6  214  146-376     5-282 (303)
212 2pml_X PFPK7, Ser/Thr protein  100.0 3.2E-37 1.1E-41  295.1  13.0  221  146-376    30-321 (348)
213 2fst_X Mitogen-activated prote 100.0 5.1E-37 1.7E-41  297.3  14.1  221  146-376    28-310 (367)
214 3qyz_A Mitogen-activated prote 100.0 6.9E-37 2.3E-41  295.5  14.9  221  146-376    26-312 (364)
215 3byv_A Rhoptry kinase; malaria 100.0 3.8E-38 1.3E-42  305.8   6.2  210  146-376    72-358 (377)
216 4exu_A Mitogen-activated prote 100.0 2.9E-36   1E-40  292.0  19.4  220  146-376    41-322 (371)
217 2xrw_A Mitogen-activated prote 100.0   2E-36 6.9E-41  293.1  17.9  220  146-376    24-317 (371)
218 3coi_A Mitogen-activated prote 100.0 3.1E-36 1.1E-40  289.4  19.0  220  146-376    23-304 (353)
219 3ll6_A Cyclin G-associated kin 100.0 1.8E-37 6.3E-42  294.5  10.0  210  146-376    27-300 (337)
220 2wei_A Calmodulin-domain prote 100.0 6.1E-37 2.1E-41  285.8  13.3  215  146-376    21-275 (287)
221 3q60_A ROP5B; pseudokinase, tr 100.0 2.8E-37 9.6E-42  299.0  11.2  217  147-376    62-351 (371)
222 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-36 3.6E-41  292.0  14.9  221  146-376    10-304 (353)
223 1blx_A Cyclin-dependent kinase 100.0 1.5E-36   5E-41  287.7  15.5  225  145-376     9-295 (326)
224 2jii_A Serine/threonine-protei 100.0 2.2E-37 7.4E-42  297.6   9.7  217  147-376    42-328 (352)
225 3pfq_A PKC-B, PKC-beta, protei 100.0 9.2E-37 3.2E-41  317.2  14.7  207  146-372   340-587 (674)
226 1u46_A ACK-1, activated CDC42  100.0 4.1E-37 1.4E-41  286.7  10.8  213  146-376    17-276 (291)
227 3n9x_A Phosphotransferase; mal 100.0 2.7E-36 9.2E-41  298.2  17.1  159  146-313    25-249 (432)
228 3g2f_A Bone morphogenetic prot 100.0 1.5E-36 5.2E-41  289.0  14.6  219  146-376    12-310 (336)
229 3sv0_A Casein kinase I-like; t 100.0 1.3E-36 4.3E-41  304.4  14.3  218  146-376     6-270 (483)
230 2eu9_A Dual specificity protei 100.0 9.7E-36 3.3E-40  284.7  19.7  224  146-376    18-332 (355)
231 2vx3_A Dual specificity tyrosi 100.0 1.3E-35 4.5E-40  288.5  20.4  165  146-317    53-260 (382)
232 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.4E-37 1.5E-41  290.4   9.6  210  146-376    32-294 (319)
233 3fhr_A MAP kinase-activated pr 100.0 1.8E-36 6.1E-41  289.7  13.7  218  146-376    27-286 (336)
234 3aln_A Dual specificity mitoge 100.0 4.5E-36 1.5E-40  285.0  16.2  217  146-376    21-284 (327)
235 1j1b_A Glycogen synthase kinas 100.0 1.1E-36 3.9E-41  299.9  12.2  224  147-376    54-335 (420)
236 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.5E-36 1.5E-40  289.7  16.0  207  146-372    64-326 (365)
237 2dyl_A Dual specificity mitoge 100.0   5E-36 1.7E-40  282.8  15.5  215  146-376    24-282 (318)
238 2iwi_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41  288.9   8.9  206  145-376    29-282 (312)
239 3rgf_A Cyclin-dependent kinase 100.0 4.5E-36 1.6E-40  293.9  14.3  165  147-316    20-237 (405)
240 1q8y_A SR protein kinase; tran 100.0 4.9E-36 1.7E-40  289.3  14.3  223  146-376    18-332 (373)
241 3a99_A Proto-oncogene serine/t 100.0   1E-36 3.5E-41  289.2   8.9  206  145-376    41-292 (320)
242 4e7w_A Glycogen synthase kinas 100.0 1.4E-36 4.9E-41  296.7   9.8  223  146-376    39-320 (394)
243 3cek_A Dual specificity protei 100.0   6E-36 2.1E-40  282.4  13.4  210  146-376    27-291 (313)
244 2j0j_A Focal adhesion kinase 1 100.0 6.7E-36 2.3E-40  309.8  14.8  212  146-376   389-643 (656)
245 2rio_A Serine/threonine-protei 100.0 2.3E-35 7.7E-40  291.8  13.0  213  149-376    17-294 (434)
246 3qa8_A MGC80376 protein; kinas 100.0 3.9E-35 1.3E-39  301.6  12.7  225  146-376    13-296 (676)
247 3p23_A Serine/threonine-protei 100.0 6.8E-35 2.3E-39  288.3  11.9  213  146-376    23-282 (432)
248 2pzi_A Probable serine/threoni 100.0   4E-34 1.4E-38  298.1  13.9  201  146-375    79-318 (681)
249 3dzo_A Rhoptry kinase domain;  100.0 3.7E-33 1.3E-37  274.2  11.6  210  146-376    77-362 (413)
250 2vuw_A Serine/threonine-protei 100.0 1.5E-32 5.2E-37  262.0   6.6  209  146-376    19-329 (336)
251 4azs_A Methyltransferase WBDD;  99.9 3.9E-25 1.3E-29  225.4  11.9  149  154-313   241-414 (569)
252 3en9_A Glycoprotease, O-sialog  99.9   1E-22 3.4E-27  206.4  11.4  123  151-293   340-473 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 1.4E-21 4.6E-26  182.2  12.5  139  137-296    80-239 (282)
254 1zth_A RIO1 serine protein kin  99.8 2.8E-19 9.6E-24  164.3   8.2  133  149-298    49-218 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 4.8E-18 1.6E-22  163.8   4.7  141  140-299    88-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.3 3.3E-12 1.1E-16  116.6  10.3  156  142-309     9-227 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.1 5.9E-11   2E-15  107.5   7.9  139  156-308    29-227 (264)
258 3dxp_A Putative acyl-COA dehyd  99.1 4.9E-10 1.7E-14  107.1  10.7  132  152-292    43-242 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.8 1.1E-08 3.9E-13   95.3   8.0  128  153-292    26-217 (304)
260 3r70_A Aminoglycoside phosphot  98.7 1.4E-07 4.7E-12   88.7  11.7  130  148-292    38-231 (320)
261 4gkh_A Aminoglycoside 3'-phosp  98.4 6.1E-07 2.1E-11   81.7   9.5  131  154-292    31-217 (272)
262 3ovc_A Hygromycin-B 4-O-kinase  98.4 2.1E-06 7.3E-11   82.1  12.9   74  152-229    46-122 (362)
263 3d1u_A Putative fructosamine-3  98.3 1.3E-06 4.4E-11   81.0   9.3   72  152-228    20-97  (288)
264 3mop_K IRAK-2, interleukin-1 r  98.3 1.2E-07 4.1E-12   74.0   1.2   35   17-51     50-92  (111)
265 3tdw_A Gentamicin resistance p  98.2 4.2E-06 1.4E-10   78.0  10.5  128  153-292    25-218 (306)
266 3ats_A Putative uncharacterize  98.1 1.1E-05 3.8E-10   76.4  10.0   78  153-230    26-122 (357)
267 2olc_A MTR kinase, methylthior  98.0 3.7E-05 1.3E-09   74.1  12.7   73  152-226    35-120 (397)
268 3jr1_A Putative fructosamine-3  97.9 7.3E-05 2.5E-09   69.9  10.6   75  152-228    41-118 (312)
269 2q83_A YTAA protein; 2635576,   97.8 0.00022 7.4E-09   66.6  13.5  154  153-310    38-267 (346)
270 1d2z_A Death domain of pelle;   97.7   4E-06 1.4E-10   65.3  -0.2   41   16-56     55-107 (108)
271 3f7w_A Putative fructosamine-3  97.6 0.00015 5.2E-09   66.5   8.6   73  151-228    19-97  (288)
272 2pyw_A Uncharacterized protein  97.3  0.0014 4.7E-08   63.6  11.3   70  152-225    39-122 (420)
273 1nw1_A Choline kinase (49.2 KD  97.0  0.0026 8.7E-08   62.0  10.1   72  153-228    79-159 (429)
274 2ppq_A HSK, HK, homoserine kin  97.0  0.0081 2.8E-07   55.5  12.9  173  135-310     5-232 (322)
275 3dxq_A Choline/ethanolamine ki  96.9  0.0025 8.4E-08   58.7   8.8   71  150-228    21-95  (301)
276 3csv_A Aminoglycoside phosphot  96.8  0.0032 1.1E-07   58.7   8.2   75  154-231    25-102 (333)
277 1zyl_A Hypothetical protein YI  96.7   0.013 4.4E-07   54.2  12.1   92  135-228     9-114 (328)
278 2a9i_A IRAK-4, interleukin-1 r  96.7 0.00032 1.1E-08   55.0   0.3   37   15-51     59-103 (113)
279 3feg_A Choline/ethanolamine ki  96.6  0.0051 1.7E-07   58.9   8.3  155  153-311    56-270 (379)
280 2yle_A Protein spire homolog 1  96.3  0.0065 2.2E-07   53.2   6.2   85  226-316    33-137 (229)
281 2qg7_A Ethanolamine kinase PV0  96.2   0.025 8.4E-07   55.5  10.9   72  153-228   114-188 (458)
282 1wh4_A IRAK4, interleukin-1 re  96.0  0.0011 3.9E-08   53.0   0.2   37   15-51     66-110 (127)
283 3c5i_A Choline kinase; choline  96.0   0.015 5.1E-07   55.0   7.8   72  153-228    39-121 (369)
284 3i1a_A Spectinomycin phosphotr  95.3    0.11 3.6E-06   48.7  10.9   64  160-228    36-108 (339)
285 1d2z_B Death domain of tube; s  94.9  0.0073 2.5E-07   49.0   1.3   35   15-49     78-127 (153)
286 3f2s_A CK, chetk-alpha, cholin  94.5    0.19 6.4E-06   48.3  10.1  155  153-311    58-296 (401)
287 3mes_A Choline kinase; malaria  93.3    0.34 1.2E-05   46.8   9.7  153  153-311    76-307 (424)
288 4ann_A ESSB; membrane protein,  92.2    0.78 2.7E-05   39.8   9.4  111  190-316    35-158 (215)
289 2g7r_A Mucosa-associated lymph  89.1   0.088   3E-06   40.6   0.4   46    6-51     56-116 (117)
290 3cxl_A N-chimerin; SH2, RHO-GA  87.8   0.045 1.6E-06   53.7  -2.5   57  152-211   147-214 (463)
291 4ano_A ESSB; membrane protein,  84.9     4.2 0.00014   35.3   8.8  126  173-316    25-163 (219)
292 3oja_A Leucine-rich immune mol  62.3    0.44 1.5E-05   46.7  -4.1   28  186-213   324-351 (487)
293 3g15_A CK, chetk-alpha, cholin  56.6     8.4 0.00029   36.4   4.0   43  269-311   245-296 (401)
294 1wmg_A Netrin receptor UNC5H2;  39.2     6.8 0.00023   29.6   0.2   33   18-50     52-95  (103)
295 1cja_A Protein (actin-fragmin   29.6 1.5E+02  0.0052   27.2   7.6  132  154-292    76-231 (342)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=5.7e-50  Score=377.11  Aligned_cols=214  Identities=19%  Similarity=0.217  Sum_probs=177.5

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcC-----CcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSE-----YHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      ++|...+.||+|+||+||+|.+..     ++..||||+++....   +.|.+|+++|++++|||||+++|+|.+++..+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            456777899999999999999753     468899999987654   779999999999999999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeE
Q 044707          219 VYPHPREGTLDNMLCPSP---------HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPM  289 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~k  289 (376)
                      |||||++|+|.++|....         .....++|.++..|+.||+.||.|||++    +||||||||+||||+.++.+|
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDlKp~NILl~~~~~~K  168 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ----HFVHRDLATRNCLVGENLLVK  168 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCccCHhhEEECCCCcEE
Confidence            999999999999996421         2346799999999999999999999999    999999999999999999999


Q ss_pred             Ecc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhh
Q 044707          290 RIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQ  332 (376)
Q Consensus       290 l~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~  332 (376)
                      |+|                                   ++.++|||||||++|||+| |+ ||......  +.+ ..+..
T Consensus       169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~-~~i~~  245 (299)
T 4asz_A          169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVI-ECITQ  245 (299)
T ss_dssp             ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHH-HHHHH
T ss_pred             ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHH-HHHHc
Confidence            999                                   8999999999999999999 88 88633211  111 11111


Q ss_pred             hhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          333 RKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       333 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                      +.        ....+..++.++.+|+.+||+.||++||||.+|
T Consensus       246 ~~--------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i  280 (299)
T 4asz_A          246 GR--------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI  280 (299)
T ss_dssp             TC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CC--------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence            11        111344566788999999999999999999987


No 2  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.1e-49  Score=373.88  Aligned_cols=213  Identities=20%  Similarity=0.221  Sum_probs=175.3

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      ++|...++||+|+||+||+|.+..   .||||+++....     +.|.+|+.++++++|||||+++|++.. +..+||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence            456677899999999999998763   499999875432     678999999999999999999998865 56899999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      ||++|+|.++|..   ....++|.++..|+.|||.||+|||+.    +||||||||+||||++++.+||+|         
T Consensus       112 y~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH~~----~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          112 WCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK----NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             CCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred             cCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC----CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence            9999999999963   346799999999999999999999999    999999999999999999999999         


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhcccc
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEED  342 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~  342 (376)
                                                   ++.++|||||||++|||+||+ ||......  ..+......    ....+.
T Consensus       185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~~~~~~~----~~~~p~  258 (307)
T 3omv_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFMVGR----GYASPD  258 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHT----TCCCCC
T ss_pred             CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHHHHHHhc----CCCCCC
Confidence                                         577999999999999999999 88632211  111111111    122333


Q ss_pred             CCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          343 LDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       343 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +...+..++..+.+|+.+||+.||++||||.||+
T Consensus       259 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~  292 (307)
T 3omv_A          259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL  292 (307)
T ss_dssp             STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHH
T ss_pred             cccccccchHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            3334556677889999999999999999999874


No 3  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=2.6e-49  Score=377.43  Aligned_cols=215  Identities=20%  Similarity=0.221  Sum_probs=179.0

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcC-----CcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSE-----YHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      ++|...++||+|+||+||+|+++.     +++.||||+++....   +.|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            446667899999999999999753     468899999987655   779999999999999999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCC-----------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC
Q 044707          219 VYPHPREGTLDNMLCPSPH-----------NELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR  287 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~  287 (376)
                      |||||++|+|.++|+....           ...+++|.+++.|+.|||.||+|||+.    +||||||||+||||+.++.
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDLKp~NILl~~~~~  196 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL----HFVHRDLATRNCLVGQGLV  196 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEETTTE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC----CeecccccHhhEEECCCCc
Confidence            9999999999999965311           235799999999999999999999999    9999999999999999999


Q ss_pred             eEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHh
Q 044707          288 PMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLM  330 (376)
Q Consensus       288 ~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~  330 (376)
                      +||+|                                   ++.++|||||||++|||+| |+ ||......  +.+ ..+
T Consensus       197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~-~~i  273 (329)
T 4aoj_A          197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAI-DCI  273 (329)
T ss_dssp             EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHH-HHH
T ss_pred             EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHH-HHH
Confidence            99999                                   8899999999999999999 88 88633211  111 111


Q ss_pred             hhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          331 LQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       331 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..+.       .+ ..+..++.++.+|+.+||+.||++||||.||+
T Consensus       274 ~~g~-------~~-~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~  311 (329)
T 4aoj_A          274 TQGR-------EL-ERPRACPPEVYAIMRGCWQREPQQRHSIKDVH  311 (329)
T ss_dssp             HHTC-------CC-CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHH
T ss_pred             HcCC-------CC-CCcccccHHHHHHHHHHcCcChhHCcCHHHHH
Confidence            1111       11 13445567889999999999999999999874


No 4  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=2.7e-49  Score=378.74  Aligned_cols=214  Identities=17%  Similarity=0.178  Sum_probs=177.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||+||+|.+..+++.||||++.....     +.+.+|+.+|++|+|||||++++++.+.+..||||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            3678999999999999999999999889999999975432     67889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      |||++|+|.++|..  .....+++.++..|+.||+.||+|||++    +||||||||+||||+.++.+||+|        
T Consensus       103 Ey~~gg~L~~~i~~--~~~~~~~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A          103 DYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHVHDR----KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             ECCTTCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHHT----TCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred             eCCCCCcHHHHHHH--cCCCCCCHHHHHHHHHHHHHHHHHHHHC----CeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence            99999999999964  4456789999999999999999999999    999999999999999999999999        


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                               |+.++|||||||++|||+||+ ||.....  .+.+....         .......
T Consensus       177 ~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~---------~~~~~~~  245 (350)
T 4b9d_A          177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--KNLVLKII---------SGSFPPV  245 (350)
T ss_dssp             HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHH---------HTCCCCC
T ss_pred             CCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHH---------cCCCCCC
Confidence                                     889999999999999999999 8874332  12222111         1111122


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +...+.++.+|+.+||+.||++|||+.|++
T Consensus       246 ~~~~s~~~~~li~~~L~~dP~~R~s~~e~l  275 (350)
T 4b9d_A          246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSIL  275 (350)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            334456788899999999999999999874


No 5  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=2e-49  Score=374.88  Aligned_cols=212  Identities=18%  Similarity=0.232  Sum_probs=175.8

Q ss_pred             CCCCceecCCCCEEEEEEEEcC-----CcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          149 FTTKALMGECKNYVGYLGYLSE-----YHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       149 f~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      ++..++||+|+||+||+|.+..     +++.||||+++....    +.|.+|+.++++++|||||+++|+|.+.+..+||
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            3445789999999999999742     458899999975433    7899999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCC------------CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC
Q 044707          220 YPHPREGTLDNMLCPSP------------HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR  287 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~  287 (376)
                      ||||++|+|.++|....            .....++|.++..|+.|||.||+|||+.    +||||||||+||||++++.
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH----HVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGC
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC----CCCCCCccccceEECCCCC
Confidence            99999999999996421            1135699999999999999999999999    9999999999999999999


Q ss_pred             eEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHHHHHHHH
Q 044707          288 PMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLIEWARPL  329 (376)
Q Consensus       288 ~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~~~~~~~  329 (376)
                      +||+|                                   ++.++|||||||++|||+| |+ ||.... ..+..    .
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~----~  259 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE----M  259 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH----H
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH----H
Confidence            99999                                   8999999999999999998 78 886332 22211    1


Q ss_pred             hhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          330 MLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       330 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +..+        .....+..++..+.+|+.+||+.||++||||.||+
T Consensus       260 i~~~--------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~  298 (308)
T 4gt4_A          260 IRNR--------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIH  298 (308)
T ss_dssp             HHTT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHcC--------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            1111        11123455667899999999999999999999874


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=4.1e-48  Score=370.02  Aligned_cols=212  Identities=13%  Similarity=0.183  Sum_probs=180.0

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      ..|...++||+|+||+||+|.+..+++.||||++.....   +.+.+|+.+|++++|||||+++++|.+.+..|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            458888999999999999999999899999999964433   67889999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      ++|+|.+++..     ..+++.++..|+.||+.||+|||++    +||||||||+||||+.+|.+||+|           
T Consensus       154 ~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  224 (346)
T 4fih_A          154 EGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ----GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  224 (346)
T ss_dssp             TTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             CCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC----CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence            99999999953     4699999999999999999999999    999999999999999999999999           


Q ss_pred             ----------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChH
Q 044707          293 ----------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMH  349 (376)
Q Consensus       293 ----------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~  349 (376)
                                            |+.++|||||||++|||++|+ ||......  +.+. .+.     ....+.+. .+..
T Consensus       225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~-~i~-----~~~~~~~~-~~~~  295 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMK-MIR-----DNLPPRLK-NLHK  295 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHH-HHH-----HSSCCCCS-CGGG
T ss_pred             CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHH-HHH-----cCCCCCCC-cccc
Confidence                                  899999999999999999999 88643221  1111 111     11111221 2334


Q ss_pred             HHHHHHHHHHHccccCCCCCCCccccC
Q 044707          350 GIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       350 ~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...++.+|+.+||+.||++|||+.|++
T Consensus       296 ~s~~~~dli~~~L~~dP~~R~ta~e~l  322 (346)
T 4fih_A          296 VSPSLKGFLDRLLVRDPAQRATAAELL  322 (346)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            456788899999999999999999985


No 7  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=9.4e-48  Score=376.32  Aligned_cols=212  Identities=13%  Similarity=0.183  Sum_probs=180.2

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      +.|...++||+|+||.||+|.+..+++.||||++.....   +.+.+|+.+|+.++|||||+++++|.+.+..|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            458888999999999999999999999999999965433   67889999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      ++|+|.+++..     ..+++.++..|+.||+.||+|||++    +||||||||+||||+.+|.+||+|           
T Consensus       231 ~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~----~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          231 EGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ----GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             TTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             CCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC----CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            99999999953     4599999999999999999999999    999999999999999999999999           


Q ss_pred             ----------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChH
Q 044707          293 ----------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMH  349 (376)
Q Consensus       293 ----------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~  349 (376)
                                            |+.++|||||||++|||++|+ ||......  +.+. .+.     ....+.+. ....
T Consensus       302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~-~i~-----~~~~~~~~-~~~~  372 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMK-MIR-----DNLPPRLK-NLHK  372 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHH-HHH-----HSCCCCCS-CTTS
T ss_pred             ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHH-HHH-----cCCCCCCc-cccc
Confidence                                  899999999999999999999 88643221  1111 111     11111221 2233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCccccC
Q 044707          350 GIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       350 ~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...++.+|+.+||+.||++|||+.|+|
T Consensus       373 ~s~~~~dli~~~L~~dP~~R~ta~ell  399 (423)
T 4fie_A          373 VSPSLKGFLDRLLVRDPAQRATAAELL  399 (423)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            456788899999999999999999986


No 8  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=5e-48  Score=364.29  Aligned_cols=209  Identities=14%  Similarity=0.113  Sum_probs=179.6

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      ++|...+.||+|+||+||+|.+..+++.||||++....      .+.+.+|+++|++|+|||||++++++.+.+..||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            56888999999999999999999999999999996432      267899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      |||++|+|.++|.    ..+.+++..+..|+.||+.||+|||++    +||||||||+||||+.++.+||+|        
T Consensus       112 Ey~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~----~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          112 SYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             CCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            9999999999994    356799999999999999999999999    999999999999999999999999        


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 |+.++||||+||++|||+||+ ||......  +..... ..+.      ..  
T Consensus       184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i-~~~~------~~--  252 (311)
T 4aw0_A          184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--LIFAKI-IKLE------YD--  252 (311)
T ss_dssp             TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH-HHTC------CC--
T ss_pred             CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-HcCC------CC--
Confidence                                       889999999999999999999 88743321  111111 1111      11  


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                       .+.....++.+|+.+||+.||++|||+.|+
T Consensus       253 -~p~~~s~~~~dli~~lL~~dp~~R~t~~e~  282 (311)
T 4aw0_A          253 -FPEKFFPKARDLVEKLLVLDATKRLGCEEM  282 (311)
T ss_dssp             -CCTTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred             -CCcccCHHHHHHHHHHccCCHhHCcChHHH
Confidence             223344577888999999999999999886


No 9  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=5.2e-48  Score=361.78  Aligned_cols=210  Identities=17%  Similarity=0.155  Sum_probs=171.4

Q ss_pred             CCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEec----CCceEEEe
Q 044707          150 TTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQS----DSASVLVY  220 (376)
Q Consensus       150 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv~  220 (376)
                      ...++||+|+||+||+|.+..++..||+|++.....     +.|.+|+.+|++|+|||||+++++|.+    .+..+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            345679999999999999999889999999965432     678999999999999999999999865    34579999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC--eeecCCCCCcEEEeC-CCCeEEcc-----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP--IAHGELQLHNIFLRH-DLRPMRIN-----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~--iiH~Dlkp~NILl~~-~~~~kl~D-----  292 (376)
                      |||++|+|.++|.    ....+++..+..|+.||+.||+|||++    +  ||||||||+||||+. ++.+||+|     
T Consensus       109 Ey~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~ylH~~----~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~  180 (290)
T 3fpq_A          109 ELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTR----TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             ECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTS----SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence            9999999999994    356799999999999999999999998    7  999999999999984 79999999     


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                               ++.++|||||||++|||+||+ ||..... ..... .....+.....       .
T Consensus       181 ~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~~~~~-~~i~~~~~~~~-------~  251 (290)
T 3fpq_A          181 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIY-RRVTSGVKPAS-------F  251 (290)
T ss_dssp             GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHH-HHHTTTCCCGG-------G
T ss_pred             eCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-HHHHH-HHHHcCCCCCC-------C
Confidence                                     889999999999999999999 8863221 11111 11111111111       1


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +.....++.+|+.+||+.||++|||+.|++
T Consensus       252 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l  281 (290)
T 3fpq_A          252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLL  281 (290)
T ss_dssp             GGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            222334678888999999999999999874


No 10 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=3e-47  Score=353.85  Aligned_cols=209  Identities=18%  Similarity=0.199  Sum_probs=173.5

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      ++|...+.||+|+||+||+|.+..+++.||||++.....      ..+.+|+.+|++++|||||++++++.+.+..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            689999999999999999999998889999999965432      67899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+ +|+|.+++.    ....+++.++..|+.||+.||+|||++    +|+||||||+|||++.++.+||+|        
T Consensus        93 Ey~-~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH~~----~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             ECC-CEEHHHHHH----HSCSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             eCC-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            999 679999994    346799999999999999999999999    999999999999999999999999        


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                               ++.++||||+||++|||+||+ ||.....  .+... ....+.      ..   .
T Consensus       164 ~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~-~i~~~~------~~---~  231 (275)
T 3hyh_A          164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFK-NISNGV------YT---L  231 (275)
T ss_dssp             -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH-HHHHTC------CC---C
T ss_pred             CCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHH-HHHcCC------CC---C
Confidence                                     357999999999999999999 8874332  11111 111111      11   2


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +.....++.+|+.+||+.||++|||+.|++
T Consensus       232 p~~~s~~~~~li~~~L~~dP~~R~s~~eil  261 (275)
T 3hyh_A          232 PKFLSPGAAGLIKRMLIVNPLNRISIHEIM  261 (275)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence            233345778889999999999999999874


No 11 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=8.1e-48  Score=366.81  Aligned_cols=209  Identities=16%  Similarity=0.091  Sum_probs=176.0

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCCCC
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPREG  226 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  226 (376)
                      +.|...++||+|+||.||+|.++.+++.||||+++....  ..+|+.+++.++|||||++++++.+++..|||||||++|
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg  135 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG  135 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence            457777899999999999999999899999999976532  357999999999999999999999999999999999999


Q ss_pred             CHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC-CeEEcc-------------
Q 044707          227 TLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL-RPMRIN-------------  292 (376)
Q Consensus       227 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~-~~kl~D-------------  292 (376)
                      +|.++|.    ..+.+++..+..|+.||+.||+|||++    +||||||||+||||+.+| .+||+|             
T Consensus       136 ~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~  207 (336)
T 4g3f_A          136 SLGQLIK----QMGCLPEDRALYYLGQALEGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG  207 (336)
T ss_dssp             BHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred             cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence            9999994    346799999999999999999999999    999999999999999988 599999             


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                               ++.++|||||||++|||+||+ ||..... .+..   .... +.      +....
T Consensus       208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~---~i~~-~~------~~~~~  277 (336)
T 4g3f_A          208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL---KIAS-EP------PPIRE  277 (336)
T ss_dssp             ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH---HHHH-SC------CGGGG
T ss_pred             cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH---HHHc-CC------CCchh
Confidence                                     889999999999999999999 8863221 1111   1111 10      01111


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                      .+......+.+++.+||+.||++|||+.||
T Consensus       278 ~~~~~s~~~~~li~~~L~~dP~~R~sa~el  307 (336)
T 4g3f_A          278 IPPSCAPLTAQAIQEGLRKEPVHRASAMEL  307 (336)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cCccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            334455678889999999999999999986


No 12 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.8e-47  Score=358.32  Aligned_cols=216  Identities=19%  Similarity=0.219  Sum_probs=170.0

Q ss_pred             CCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHH--HHHHHHhcCCCCCceeeeeeEecCC----ceEEEee
Q 044707          148 KFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILE--AEKKAAWSMRHKNILGLLGYHQSDS----ASVLVYP  221 (376)
Q Consensus       148 ~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~--~E~~~l~~l~h~nIv~l~~~~~~~~----~~~lv~e  221 (376)
                      +|...++||+|+||+||+|.+.  ++.||||++.....+.+.  .|+..+.+++|||||+++|+|...+    ..+||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            4556789999999999999985  689999999876664444  4566667889999999999998654    4799999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-----CCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQEC-----PRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ||++|+|.++|+.     ..++|..+.+|+.|++.||+|||+.+     .+ +||||||||+||||+.++.+||+|    
T Consensus        82 y~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~-~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           82 YHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             CCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-CEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            9999999999964     46999999999999999999999762     33 799999999999999999999999    


Q ss_pred             ---------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-------------
Q 044707          293 ---------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-------------  319 (376)
Q Consensus       293 ---------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-------------  319 (376)
                                                             ++.++|||||||++|||+||. |+....             
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence                                                   234799999999999999998 543111             


Q ss_pred             hhHHHHHHHHhhhhhhhhhccccCCC--CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          320 RSLIEWARPLMLQRKFHELLEEDLDF--SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       320 ~~l~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..... +...    .....+++.++.  ...+++..+.+|+.+||+.||++||||.||+
T Consensus       236 ~~~~~-~~~~----~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~  289 (303)
T 3hmm_A          236 PSVEE-MRKV----VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK  289 (303)
T ss_dssp             CCHHH-HHHH----HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred             chHHH-HHHH----HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHH
Confidence            01111 1111    111223333332  3446778899999999999999999999874


No 13 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.1e-46  Score=362.24  Aligned_cols=217  Identities=18%  Similarity=0.184  Sum_probs=176.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCC-----cEEEEEEecCCCCH----HHHHHHHHHHhcCCC-CCceeeeeeEecC-C
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEY-----HAFVLVKRFTGDSS----SILEAEKKAAWSMRH-KNILGLLGYHQSD-S  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~~----~~~~~E~~~l~~l~h-~nIv~l~~~~~~~-~  214 (376)
                      .++|...+.||+|+||+||+|.+...     ++.||||.+.....    +.|.+|+.+|.++.| ||||+++|+|... +
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~  142 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  142 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence            46788889999999999999998643     47899999976543    678999999999965 8999999998764 5


Q ss_pred             ceEEEeecCCCCCHhhhcCCCC------------CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE
Q 044707          215 ASVLVYPHPREGTLDNMLCPSP------------HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL  282 (376)
Q Consensus       215 ~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl  282 (376)
                      ..+||||||++|+|.++|+...            .....++|.++..|+.|||.||+|||++    +||||||||+|||+
T Consensus       143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~----~iiHRDLK~~NILl  218 (353)
T 4ase_A          143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILL  218 (353)
T ss_dssp             CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEE
T ss_pred             EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC----CeecCccCccceee
Confidence            6899999999999999996421            1135689999999999999999999999    99999999999999


Q ss_pred             eCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHH
Q 044707          283 RHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEW  325 (376)
Q Consensus       283 ~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~  325 (376)
                      ++++.+||+|                                   ++.++|||||||++|||+| |+ ||......  +.
T Consensus       219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~--~~  296 (353)
T 4ase_A          219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EE  296 (353)
T ss_dssp             CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--HH
T ss_pred             CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH--HH
Confidence            9999999999                                   8999999999999999998 88 88632211  11


Q ss_pred             HHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          326 ARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       326 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +...+..+.     ...   .+..++.++.+++.+||+.||++||||.||+
T Consensus       297 ~~~~i~~g~-----~~~---~p~~~~~~~~~li~~c~~~dP~~RPt~~eil  339 (353)
T 4ase_A          297 FCRRLKEGT-----RMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELV  339 (353)
T ss_dssp             HHHHHHHTC-----CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHcCC-----CCC---CCccCCHHHHHHHHHHcCcChhHCcCHHHHH
Confidence            112222221     111   3344556788999999999999999999874


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=8.8e-47  Score=355.35  Aligned_cols=206  Identities=15%  Similarity=0.116  Sum_probs=169.6

Q ss_pred             cCCCCCceecCCCCEEEEEEEEc---CCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          147 DKFTTKALMGECKNYVGYLGYLS---EYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      ++|...+.||+|+||+||+|...   .+++.||||++.....     ..+.+|+.+|++++|||||++++++.+.+..||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            56888899999999999999874   3568999999975432     568899999999999999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      |||||++|+|.++|.    ....+++.++..|+.||+.||+|||++    +||||||||+|||++.++.+||+|      
T Consensus       104 vmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~  175 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL----GIIYRDLKPENILLDEEGHIKLTDFGLSKE  175 (304)
T ss_dssp             EECCCTTCEEHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred             EEEcCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence            999999999999994    356799999999999999999999999    999999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|||+||+ ||......  +...... .        ....
T Consensus       176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i~-~--------~~~~  244 (304)
T 3ubd_A          176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTMIL-K--------AKLG  244 (304)
T ss_dssp             -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH-H--------CCCC
T ss_pred             ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--HHHHHHH-c--------CCCC
Confidence                                       899999999999999999999 88743321  1111111 1        1111


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                       .+...+.++.+|+.+||+.||++|||+
T Consensus       245 -~p~~~s~~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          245 -MPQFLSPEAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             -CCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence             233345678889999999999999996


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.6e-45  Score=345.59  Aligned_cols=213  Identities=15%  Similarity=0.128  Sum_probs=168.5

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCC--------
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDS--------  214 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--------  214 (376)
                      ++|...+.||+|+||+||+|.++.+++.||||++.....    +.+.+|+.+|++|+|||||+++++|.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            468888999999999999999998889999999865433    67889999999999999999999987544        


Q ss_pred             ----ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEE
Q 044707          215 ----ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMR  290 (376)
Q Consensus       215 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl  290 (376)
                          ..|||||||++|+|.+++... ......++..++.|+.||+.||+|||++    +||||||||+||||+.++.+||
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~al~ylH~~----~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGR-CTIEERERSVCLHIFLQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTC-CSGGGSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEE
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhc-CCCChhHHHHHHHHHHHHHHHHHHHHHC----cCccccCcHHHeEECCCCcEEE
Confidence                368999999999999999642 2223456778899999999999999999    9999999999999999999999


Q ss_pred             cc---------------------------------------------CCCcchhhhHHHHHHHHHhCCCCCcChhhHHHH
Q 044707          291 IN---------------------------------------------AITKIRCLLFGVLLLRLFCRRSMPQDYRSLIEW  325 (376)
Q Consensus       291 ~D---------------------------------------------~~~~~Dv~S~Gvvl~elltg~P~~~~~~~l~~~  325 (376)
                      +|                                             |+.++|||||||++|||++  ||........ .
T Consensus       160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~--Pf~~~~~~~~-~  236 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--PFSTQMERVR-T  236 (299)
T ss_dssp             CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--CCSSHHHHHH-H
T ss_pred             ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--CCCCccHHHH-H
Confidence            99                                             7889999999999999997  6642221111 1


Q ss_pred             HHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          326 ARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       326 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      + .        .+.+...+.........+.+|+.+||+.||++|||+.||+
T Consensus       237 ~-~--------~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil  278 (299)
T 4g31_A          237 L-T--------DVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINII  278 (299)
T ss_dssp             H-H--------HHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             H-H--------HHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            1 0        1111111111222334567789999999999999999874


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.7e-43  Score=344.14  Aligned_cols=221  Identities=13%  Similarity=0.140  Sum_probs=175.4

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEec------CCc
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQS------DSA  215 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~  215 (376)
                      ++|...+.||+|+||+||+|.+..+++.||||++.....     +.+.+|+.+|+.|+|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            568888999999999999999999899999999975432     667899999999999999999998753      467


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---  292 (376)
                      .|||||||. |+|.+++.    ....+++..+..|+.||+.||.|||++    +||||||||+|||++.++.+||+|   
T Consensus       134 ~~ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~----~iiHRDlKP~NIl~~~~~~~Ki~DFGl  204 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA----QVIHRDLKPSNLLVNENCELKIGDFGM  204 (398)
T ss_dssp             EEEEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----cCcCCCcCccccccCCCCCEEEeecce
Confidence            899999996 68999994    457899999999999999999999999    999999999999999999999999   


Q ss_pred             -----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hhHHHHHHHHhhhh--
Q 044707          293 -----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RSLIEWARPLMLQR--  333 (376)
Q Consensus       293 -----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~l~~~~~~~~~~~--  333 (376)
                                                         ++.++||||+||++|||++|+ ||.... ......+.......  
T Consensus       205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~  284 (398)
T 4b99_A          205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP  284 (398)
T ss_dssp             CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred             eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence                                               688999999999999999999 886332 22222111111000  


Q ss_pred             ---------hhhhhc---cccCCC----CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 ---------KFHELL---EEDLDF----SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ---------~~~~~~---d~~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                               .....+   .+....    .......++.+|+.+||+.||++|||+.|+|
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L  343 (398)
T 4b99_A          285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL  343 (398)
T ss_dssp             GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHh
Confidence                     000000   000000    0112345678899999999999999999876


No 17 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=5.4e-43  Score=332.42  Aligned_cols=244  Identities=27%  Similarity=0.485  Sum_probs=210.4

Q ss_pred             CCCCccccHHHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceee
Q 044707          131 LGQPLQLSWEVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGL  206 (376)
Q Consensus       131 ~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l  206 (376)
                      .+....|++.++...+++|...+.||+|+||.||+|.+.+ ++.||||++.....    ..+.+|+.++..++||||+++
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSS-SCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred             cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecC-CCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence            4556789999999999999999999999999999998654 58899999986543    478999999999999999999


Q ss_pred             eeeEecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC
Q 044707          207 LGYHQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL  286 (376)
Q Consensus       207 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~  286 (376)
                      ++++...+..++||||+.+|+|.+++.........+++..+..|+.|++.||.|||+.+.+ +|+||||||+|||++.++
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~Dlkp~Nil~~~~~  171 (326)
T 3uim_A           93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP-KIIHRDVKAANILLDEEF  171 (326)
T ss_dssp             CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSS-CEECCCCSGGGEEECTTC
T ss_pred             EEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEeCCCchhhEEECCCC
Confidence            9999999999999999999999999976434456799999999999999999999998766 799999999999999999


Q ss_pred             CeEEcc----------------------------------CCCcchhhhHHHHHHHHHhCC-CCC------cChhhHHHH
Q 044707          287 RPMRIN----------------------------------AITKIRCLLFGVLLLRLFCRR-SMP------QDYRSLIEW  325 (376)
Q Consensus       287 ~~kl~D----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~------~~~~~l~~~  325 (376)
                      .+||+|                                  ++.++||||||+++|||++|+ ||.      .....+..|
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  251 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW  251 (326)
T ss_dssp             CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred             CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence            999999                                  567999999999999999999 885      233445566


Q ss_pred             HHHHhhhhhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          326 ARPLMLQRKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       326 ~~~~~~~~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +.............+..... .....+..+.+++.+||+.||.+|||+.+|+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell  303 (326)
T 3uim_A          252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV  303 (326)
T ss_dssp             HTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHH
T ss_pred             HHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHH
Confidence            66666666666666666554 6778889999999999999999999999874


No 18 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=9.1e-43  Score=330.56  Aligned_cols=236  Identities=27%  Similarity=0.437  Sum_probs=201.0

Q ss_pred             cccHHHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEec
Q 044707          136 QLSWEVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQS  212 (376)
Q Consensus       136 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~  212 (376)
                      .+++.++...+++|...+.||+|+||.||+|.+.+ ++.||||++.....   +.+.+|+.+++.++||||+++++++..
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  106 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE  106 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTT-CCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECC-CCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            44555566678999999999999999999999764 58899999876543   778999999999999999999999999


Q ss_pred             CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          213 DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       213 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                      .+..++||||+++|+|.+++.........+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||+|
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~D  182 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR----AIIHRDVKSINILLDENFVPKITD  182 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCSTTEEECTTCCEEECC
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC----CeecCCCCHHHEEECCCCCEEEee
Confidence            9999999999999999999976433345799999999999999999999999    999999999999999999999999


Q ss_pred             -----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcC----hhhHHHHHHHHhhh
Q 044707          293 -----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQD----YRSLIEWARPLMLQ  332 (376)
Q Consensus       293 -----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~----~~~l~~~~~~~~~~  332 (376)
                                                         ++.++||||||+++|||++|+ |+...    ......|.......
T Consensus       183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~  262 (321)
T 2qkw_B          183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN  262 (321)
T ss_dssp             CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred             cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence                                               677999999999999999999 88622    23445555555555


Q ss_pred             hhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 RKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 ~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +.+...+++.+.. ........+.+++.+||+.||++|||+.||+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  307 (321)
T 2qkw_B          263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL  307 (321)
T ss_dssp             TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            5566666666544 6678889999999999999999999999874


No 19 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.6e-42  Score=334.77  Aligned_cols=166  Identities=17%  Similarity=0.256  Sum_probs=149.3

Q ss_pred             HHHHhcCCCCCceecCCCCEEEEEEEEc---CCcEEEEEEecCCCCH-HHHHHHHHHHhcC-CCCCceeeeeeEecCCce
Q 044707          142 IMEITDKFTTKALMGECKNYVGYLGYLS---EYHAFVLVKRFTGDSS-SILEAEKKAAWSM-RHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       142 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~~-~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~  216 (376)
                      +....+.|...++||+|+||+||+|+++   .+++.||+|.+..... ..+.+|+++|..+ +|||||++++++.+.+..
T Consensus        16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            3445688999999999999999999875   3568999999876544 6788999999998 599999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC-CCeEEcc---
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD-LRPMRIN---  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~-~~~kl~D---  292 (376)
                      +|||||+++|+|.+++.       .+++.++..|+.||+.||+|||++    +||||||||+|||++.+ +.+||+|   
T Consensus        96 ~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~----gIiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF----GIVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             EEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence            99999999999999993       489999999999999999999999    99999999999999877 7888877   


Q ss_pred             -----------------------------------------------------------CCCcchhhhHHHHHHHHHhCC
Q 044707          293 -----------------------------------------------------------AITKIRCLLFGVLLLRLFCRR  313 (376)
Q Consensus       293 -----------------------------------------------------------~~~~~Dv~S~Gvvl~elltg~  313 (376)
                                                                                 ++.++||||+||++|||++|+
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence                                                                       677899999999999999999


Q ss_pred             -CCCcC
Q 044707          314 -SMPQD  318 (376)
Q Consensus       314 -P~~~~  318 (376)
                       ||...
T Consensus       245 ~Pf~~~  250 (361)
T 4f9c_A          245 YPFYKA  250 (361)
T ss_dssp             SSSSCC
T ss_pred             CCCCCC
Confidence             98743


No 20 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=4.4e-42  Score=351.31  Aligned_cols=209  Identities=12%  Similarity=0.019  Sum_probs=173.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHH---HHHHHHhcCCCCCceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILE---AEKKAAWSMRHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~---~E~~~l~~l~h~nIv~l~~~~~~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.++.+++.||||++.....      ..+.   .++.++..++|||||+++++|.+.+..
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            4789999999999999999999999999999999964322      2233   346777788999999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      |||||||+||+|.++|.    ..+.+++..+..|+.||+.||+|||++    +||||||||+||||+.+|.+||+|    
T Consensus       268 ylVmEy~~GGdL~~~l~----~~~~l~E~~a~~y~~qIl~aL~yLH~~----gIiHRDLKPeNILld~~G~vKL~DFGlA  339 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNR----FVVYRDLKPANILLDEHGHVRISDLGLA  339 (689)
T ss_dssp             EEEECCCCSCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCchHHeEEeCCCCEEeccccee
Confidence            99999999999999994    356799999999999999999999999    999999999999999999999999    


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhhhhhhhhcccc
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQRKFHELLEED  342 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~~~~~~~~d~~  342 (376)
                                                  |+.++|||||||++|||++|+ ||..... ........         +....
T Consensus       340 ~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~---------i~~~~  410 (689)
T 3v5w_A          340 CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---------TLTMA  410 (689)
T ss_dssp             EECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH---------HHHCC
T ss_pred             eecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---------hcCCC
Confidence                                        789999999999999999999 8863321 21111111         11111


Q ss_pred             CCCCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          343 LDFSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       343 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                      .. .+.....++.+|+.+||+.||.+|++.
T Consensus       411 ~~-~p~~~S~~a~dLI~~lL~~dP~~Rl~~  439 (689)
T 3v5w_A          411 VE-LPDSFSPELRSLLEGLLQRDVNRRLGC  439 (689)
T ss_dssp             CC-CCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred             CC-CCccCCHHHHHHHHHHccCCHhHCCCC
Confidence            11 233345677888999999999999983


No 21 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=7.8e-42  Score=348.77  Aligned_cols=215  Identities=15%  Similarity=0.109  Sum_probs=180.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      .++|...+.||+|+||.||+|.++.+++.||+|++.....   +.+.+|+.+|+.|+|||||+++++|.+.+..+|||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            4789999999999999999999999999999999976554   6788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC--CCeEEcc--------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD--LRPMRIN--------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~--~~~kl~D--------  292 (376)
                      |.+|+|.++|.   .....+++.++..|+.||+.||.|||++    +|+||||||+|||++.+  +.+||+|        
T Consensus       236 ~~gg~L~~~i~---~~~~~l~e~~~~~~~~qi~~al~ylH~~----~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          236 MSGGELFEKVA---DEHNKMSEDEAVEYMRQVCKGLCHMHEN----NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             CCCCBHHHHHT---CTTSCEEHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred             cCCCcHHHHHH---HhCCCCCHHHHHHHHHHHHHHHHHHHHC----CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence            99999999995   3346799999999999999999999999    99999999999999854  8899999        


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC-C
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF-S  346 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~-~  346 (376)
                                              |+.++|||||||++|||++|+ ||......  +.+... ..+.      ..+.. .
T Consensus       309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~~~i-~~~~------~~~~~~~  379 (573)
T 3uto_A          309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRNV-KSCD------WNMDDSA  379 (573)
T ss_dssp             TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHH-HTTC------CCCCSGG
T ss_pred             CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHH-HhCC------CCCCccc
Confidence                                    778999999999999999999 88743321  111111 1110      11111 1


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......++.+|+.+||+.||.+|||+.|+|
T Consensus       380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~l  409 (573)
T 3uto_A          380 FSGISEDGKDFIRKLLLADPNTRMTIHQAL  409 (573)
T ss_dssp             GTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            223345778889999999999999999874


No 22 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.1e-40  Score=313.67  Aligned_cols=238  Identities=22%  Similarity=0.366  Sum_probs=198.3

Q ss_pred             CCCccccHHHHHHHhcCCCCC------ceecCCCCEEEEEEEEcCCcEEEEEEecCCCC-------HHHHHHHHHHHhcC
Q 044707          132 GQPLQLSWEVIMEITDKFTTK------ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS-------SSILEAEKKAAWSM  198 (376)
Q Consensus       132 ~~~~~~~~~~l~~~~~~f~~~------~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~E~~~l~~l  198 (376)
                      .....|++.++..++++|...      +.||+|+||.||+|.+.  ++.||||++....       .+.+.+|+.+++.+
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l   87 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC   87 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhc
Confidence            345789999999999999988      89999999999999874  5789999986532       16788999999999


Q ss_pred             CCCCceeeeeeEecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCC
Q 044707          199 RHKNILGLLGYHQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLH  278 (376)
Q Consensus       199 ~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~  278 (376)
                      +||||+++++++...+..++||||+++|+|.+++... .....+++..++.|+.|++.||.|||+.    +|+||||||+
T Consensus        88 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dlkp~  162 (307)
T 2nru_A           88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHEN----HHIHRDIKSA  162 (307)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGG
T ss_pred             CCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcC----CeecCCCCHH
Confidence            9999999999999999999999999999999999642 2345799999999999999999999999    9999999999


Q ss_pred             cEEEeCCCCeEEcc----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh--hh
Q 044707          279 NIFLRHDLRPMRIN----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY--RS  321 (376)
Q Consensus       279 NILl~~~~~~kl~D----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~--~~  321 (376)
                      |||++.++.+||+|                                  ++.++||||||+++|+|++|. |+....  ..
T Consensus       163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  242 (307)
T 2nru_A          163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL  242 (307)
T ss_dssp             GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB
T ss_pred             HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHH
Confidence            99999999999999                                  356899999999999999999 876321  11


Q ss_pred             HHHHHHHHhh-hhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          322 LIEWARPLML-QRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       322 l~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +..+...... ...+...+++.+...+......+.+++.+||+.||.+|||+.+|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~  298 (307)
T 2nru_A          243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ  298 (307)
T ss_dssp             TTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            2222211111 123445555555556777888999999999999999999999874


No 23 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.9e-40  Score=311.73  Aligned_cols=213  Identities=12%  Similarity=0.109  Sum_probs=179.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||||++.....   +.+.+|+.+++.++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            4679999999999999999999988889999999864432   7788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----------  292 (376)
                      +.+|+|.+++..     ..+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|          
T Consensus        99 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A           99 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN----QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             CTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             CCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC----CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            999999999953     3689999999999999999999999    999999999999999999999999          


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCCh
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDM  348 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~  348 (376)
                                             ++.++|||||||++|||++|+ ||.......  ........+      .+... .+.
T Consensus       170 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~------~~~~~-~~~  240 (297)
T 3fxz_A          170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYLIATNG------TPELQ-NPE  240 (297)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHHC------SCCCS-CGG
T ss_pred             ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCC------CCCCC-Ccc
Confidence                                   678999999999999999999 886433211  111111110      11111 233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          349 HGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       349 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....+.+++.+||+.||++|||+.|++
T Consensus       241 ~~~~~~~~li~~~l~~dp~~Rps~~ell  268 (297)
T 3fxz_A          241 KLSAIFRDFLNRCLEMDVEKRGSAKELL  268 (297)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            4456788899999999999999999885


No 24 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=3.9e-40  Score=313.15  Aligned_cols=224  Identities=13%  Similarity=0.149  Sum_probs=185.4

Q ss_pred             ccccHHHHHHHhcC----------CCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCC
Q 044707          135 LQLSWEVIMEITDK----------FTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHK  201 (376)
Q Consensus       135 ~~~~~~~l~~~~~~----------f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~  201 (376)
                      ..|+++++..+++.          |...+.||+|+||.||+|.+..+++.||||++.....   +.+.+|+.+++.++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            56899999988875          5666789999999999999987789999999875443   7788999999999999


Q ss_pred             CceeeeeeEecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEE
Q 044707          202 NILGLLGYHQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIF  281 (376)
Q Consensus       202 nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NIL  281 (376)
                      ||+++++++...+..++||||+++|+|.+++..     ..+++..+..++.|++.||.|||+.    +|+||||||+|||
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIl  173 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ----GVIHRDIKSDSIL  173 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEE
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEE
Confidence            999999999999999999999999999999853     4699999999999999999999999    9999999999999


Q ss_pred             EeCCCCeEEcc---------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHH
Q 044707          282 LRHDLRPMRIN---------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWAR  327 (376)
Q Consensus       282 l~~~~~~kl~D---------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~  327 (376)
                      ++.++.+||+|                                 ++.++||||||+++|||++|+ ||......  ....
T Consensus       174 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~  251 (321)
T 2c30_A          174 LTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMK  251 (321)
T ss_dssp             ECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHH
T ss_pred             ECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence            99999999999                                 567899999999999999999 88633221  1111


Q ss_pred             HHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          328 PLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       328 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       ...     ....+.+. ........+.+++.+||+.||++|||+.+|+
T Consensus       252 -~~~-----~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  293 (321)
T 2c30_A          252 -RLR-----DSPPPKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELL  293 (321)
T ss_dssp             -HHH-----HSSCCCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             -HHh-----cCCCCCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence             111     11111111 1223345788899999999999999999874


No 25 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.5e-40  Score=317.16  Aligned_cols=211  Identities=16%  Similarity=0.158  Sum_probs=178.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+++.++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            5678889999999999999999988889999999865432     66889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+++|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus        94 e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~al~~lH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           94 EYASGGEVFDYLV----AHGRMKEKEARSKFRQIVSAVQYCHQK----RIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             CCCTTCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             ECCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            9999999999994    346799999999999999999999999    999999999999999999999999        


Q ss_pred             ------------------------C-CCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 ------------------------A-ITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 ------------------------~-~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                              + +.++|||||||++|||++|+ ||......  +..... ..+        ... .
T Consensus       166 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i-~~~--------~~~-~  233 (328)
T 3fe3_A          166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRERV-LRG--------KYR-I  233 (328)
T ss_dssp             SSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH-HHC--------CCC-C
T ss_pred             CCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHHHH-HhC--------CCC-C
Confidence                                    2 47899999999999999999 88743321  111111 111        111 2


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +......+.+++.+||+.||.+|||+.|++
T Consensus       234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil  263 (328)
T 3fe3_A          234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIM  263 (328)
T ss_dssp             CTTSCHHHHHHHHHHCCSSTTTSCCHHHHT
T ss_pred             CCCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            223345778889999999999999999875


No 26 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.6e-40  Score=317.99  Aligned_cols=211  Identities=17%  Similarity=0.182  Sum_probs=178.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....    ..+.+|+.+++.++||||+++++++...+..++|||
T Consensus         9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   88 (347)
T 3zgw_A            9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE   88 (347)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence            5778889999999999999999988889999999876542    578899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+++|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|         
T Consensus        89 ~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  160 (347)
T 3zgw_A           89 YCPGGELFDYII----SQDRLSEEETRVVFRQIVSAVAYVHSQ----GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG  160 (347)
T ss_dssp             CCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred             CCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence            999999999994    345799999999999999999999999    999999999999999999999999         


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++|||||||++|||++|. ||......  +...... .+        ... 
T Consensus       161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--~~~~~i~-~~--------~~~-  228 (347)
T 3zgw_A          161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM--ALYKKIM-RG--------KYD-  228 (347)
T ss_dssp             -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH-HT--------CCC-
T ss_pred             CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHH-cC--------CCC-
Confidence                                      377899999999999999999 88743321  1111111 11        111 


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||++|||+.||+
T Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~Rps~~eil  259 (347)
T 3zgw_A          229 VPKWLSPSSILLLQQMLQVDPKKRISMKNLL  259 (347)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcccCHhHCcCHHHHh
Confidence            1222345677889999999999999999874


No 27 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=3.2e-40  Score=311.30  Aligned_cols=215  Identities=17%  Similarity=0.260  Sum_probs=176.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      .++|...++||+|+||.||+|.+..+++.||+|++.....   +.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            3567888999999999999999998889999999876544   7788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----------  292 (376)
                      +++|+|.+++..   ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|          
T Consensus        89 ~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           89 IKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSM----NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             CTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred             cCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence            999999999963   356799999999999999999999999    999999999999999999999998          


Q ss_pred             -------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhh
Q 044707          293 -------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRK  334 (376)
Q Consensus       293 -------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~  334 (376)
                                                           ++.++||||||+++|||++|. |+.........      ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~------~~~~  235 (310)
T 3s95_A          162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD------FGLN  235 (310)
T ss_dssp             ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT------SSBC
T ss_pred             cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH------Hhhh
Confidence                                                 356899999999999999999 66421110000      0000


Q ss_pred             hhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          335 FHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       335 ~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....+..   .+..+...+.+++.+||+.||++|||+.+|+
T Consensus       236 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~  274 (310)
T 3s95_A          236 VRGFLDRY---CPPNCPPSFFPITVRCCDLDPEKRPSFVKLE  274 (310)
T ss_dssp             HHHHHHHT---CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hhcccccc---CCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            01111111   1222334688899999999999999998873


No 28 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=3.7e-40  Score=313.79  Aligned_cols=213  Identities=15%  Similarity=0.194  Sum_probs=176.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCC---cEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEY---HAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .+.|...+.||+|+||.||+|.+..+   +..||||++.....    +.+.+|+.++.+++||||+++++++.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            35677889999999999999999643   35699999986432    678899999999999999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..   ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       128 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          128 VTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL----GYVHRDLAARNVLVDSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             EEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             EeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence            9999999999999963   345799999999999999999999999    999999999999999999999999      


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhcc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                    ++.++||||||+++|||++ |. ||......  +.. .....+     . 
T Consensus       201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~-~~~~~~-----~-  271 (325)
T 3kul_A          201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVI-SSVEEG-----Y-  271 (325)
T ss_dssp             CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHH-HHHHTT-----C-
T ss_pred             cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHH-HHHHcC-----C-
Confidence                                          5668999999999999999 88 88633221  111 111111     0 


Q ss_pred             ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ....+......+.+|+.+||+.||++|||+.+|+
T Consensus       272 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil  305 (325)
T 3kul_A          272 --RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV  305 (325)
T ss_dssp             --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHH
Confidence              0112344556888999999999999999999874


No 29 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=7.2e-40  Score=311.64  Aligned_cols=214  Identities=14%  Similarity=0.141  Sum_probs=176.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....    +.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            4678889999999999999999998889999999865433    567899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+++|+|.+++.    ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|         
T Consensus        86 ~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  157 (323)
T 3tki_A           86 YCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI----GITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (323)
T ss_dssp             CCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             cCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence            999999999994    456799999999999999999999999    999999999999999999999999         


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|||++|+ ||.........+.  .+....  ...     
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~--~~~~~~--~~~-----  228 (323)
T 3tki_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DWKEKK--TYL-----  228 (323)
T ss_dssp             TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH--HHHTTC--TTS-----
T ss_pred             CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH--HHhccc--ccC-----
Confidence                                       256799999999999999999 8863322111110  000000  000     


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .........+.+|+.+||+.||++|||+.||+
T Consensus       229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil  260 (323)
T 3tki_A          229 NPWKKIDSAPLALLHKILVENPSARITIPDIK  260 (323)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             CccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            01233445778899999999999999999875


No 30 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.7e-40  Score=311.25  Aligned_cols=215  Identities=15%  Similarity=0.153  Sum_probs=178.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+.....  ..+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            4678888999999999999999998889999999986554  66889999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC--CCCeEEcc---------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH--DLRPMRIN---------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~--~~~~kl~D---------  292 (376)
                      ++|+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.  ++.+||+|         
T Consensus        84 ~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~----givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~  156 (321)
T 1tki_A           84 SGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH----NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             CCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC----CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence            99999999953   345799999999999999999999999    9999999999999987  78999999         


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC-CC
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF-SD  347 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~-~~  347 (376)
                                             ++.++|||||||++|+|++|. ||......  +...... .+..      .... ..
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~-~~~~------~~~~~~~  227 (321)
T 1tki_A          157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIM-NAEY------TFDEEAF  227 (321)
T ss_dssp             TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHH-HTCC------CCCHHHH
T ss_pred             CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHH-cCCC------CCChhhh
Confidence                                   478999999999999999999 88643321  1111111 1100      0000 11


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....++.+++.+||..||.+|||+.|++
T Consensus       228 ~~~s~~~~~li~~~L~~dp~~Rpt~~e~l  256 (321)
T 1tki_A          228 KEISIEAMDFVDRLLVKERKSRMTASEAL  256 (321)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            12345788899999999999999999874


No 31 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=4.3e-40  Score=319.46  Aligned_cols=213  Identities=16%  Similarity=0.207  Sum_probs=175.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEc---CCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLS---EYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+.   .++..||||.+.....    +.+.+|+.++.+++||||+++++++...+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            457899999999999999999886   3457899999976432    678999999999999999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..   ....+++.++..|+.||+.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       124 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  196 (373)
T 2qol_A          124 VTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM----GYVHRDLAARNILINSNLVCKVSDFGLGRV  196 (373)
T ss_dssp             EEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             EEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence            9999999999999963   345799999999999999999999999    999999999999999999999999      


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhcc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                    ++.++||||||+++|||++ |+ |+......  +.. .....+     ..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~-~~i~~~-----~~  268 (373)
T 2qol_A          197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVI-KAVDEG-----YR  268 (373)
T ss_dssp             -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHH-HHHHTT-----EE
T ss_pred             cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHH-HHHHcC-----CC
Confidence                                          5778999999999999998 88 88633211  111 111111     00


Q ss_pred             ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        . ..+..+...+.+++.+||+.||++||++.+|+
T Consensus       269 --~-~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~  301 (373)
T 2qol_A          269 --L-PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV  301 (373)
T ss_dssp             --C-CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --C-CCCccccHHHHHHHHHHhCcChhhCcCHHHHH
Confidence              0 12334556788999999999999999999874


No 32 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=1.5e-40  Score=322.95  Aligned_cols=213  Identities=18%  Similarity=0.217  Sum_probs=177.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||.+.....    ..+.+|+.++++++||||+++++++...+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            4567778999999999999999987789999999976532    467899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+++|+|.+++..   ....+++..+..++.|++.||+|||+.    +|+||||||+|||++.++.+||+|         
T Consensus       193 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          193 LVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK----CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             CCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC----CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            9999999999952   334689999999999999999999999    999999999999999999999999         


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                ++.++|||||||++|||++ |. |+.......   .......+.       .+ 
T Consensus       266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~~~~~~~~-------~~-  334 (377)
T 3cbl_A          266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TREFVEKGG-------RL-  334 (377)
T ss_dssp             SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HHHHHHTTC-------CC-
T ss_pred             CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC-------CC-
Confidence                                      4668999999999999998 88 776322111   111111110       01 


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..+..++..+.+|+.+||+.||++|||+.+|+
T Consensus       335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~  366 (377)
T 3cbl_A          335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIY  366 (377)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            12334456788999999999999999999874


No 33 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.1e-39  Score=308.52  Aligned_cols=214  Identities=18%  Similarity=0.165  Sum_probs=176.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+.  +..||||++.....     +.+.+|+.++++++||||+++++++...+..++||
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence            467888899999999999999875  68899999976542     57889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC--eeecCCCCCcEEEeCCCCeEEcc------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP--IAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~--iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||+++|+|.+++... .....+++..++.++.|++.||.|||+.    +  |+||||||+|||++.++.+||+|      
T Consensus       114 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          114 EYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR----NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             ECCTTCBHHHHHHST-THHHHSCHHHHHHHHHHHHHHHHHHHTS----SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred             ecCCCCcHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcC----CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence            999999999999641 1112499999999999999999999999    8  99999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|||++|+ ||......-  .......       .... .
T Consensus       189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~-------~~~~-~  258 (309)
T 3p86_A          189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGF-------KCKR-L  258 (309)
T ss_dssp             -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHH-------SCCC-C
T ss_pred             ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh-------cCCC-C
Confidence                                       678999999999999999999 887332211  1111100       0000 1


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..+......+.+++.+||+.||.+|||+.+|+
T Consensus       259 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll  290 (309)
T 3p86_A          259 EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM  290 (309)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            12334456788999999999999999999874


No 34 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=6.3e-40  Score=302.13  Aligned_cols=213  Identities=19%  Similarity=0.196  Sum_probs=174.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecC--CceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSD--SASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+.  +..||||++.....     +.+.+|+.++++++||||+++++++.+.  +..++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL   86 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence            356888899999999999999986  68899999986542     6789999999999999999999999887  77899


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC--eeecCCCCCcEEEeCCCCeEEcc----
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP--IAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~--iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ||||+++|+|.+++..  .....+++..+..|+.|++.||.|||+.    +  |+||||||+|||++.++.++|.|    
T Consensus        87 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~~~i~H~dikp~Nil~~~~~~~~l~~~~~~  160 (271)
T 3kmu_A           87 ITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLHTL----EPLIPRHALNSRSVMIDEDMTARISMADVK  160 (271)
T ss_dssp             EEECCTTCBHHHHHHS--CSSCCCCHHHHHHHHHHHHHHHHHHTTS----SSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred             eecccCCCcHHHHHhh--cccCCCCHHHHHHHHHHHHHHHHHHhcC----CCceecCCCccceEEEcCCcceeEEeccce
Confidence            9999999999999975  3444799999999999999999999998    8  99999999999999999999987    


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++||||||+++|||++|+ ||......  .........     ...+.  
T Consensus       161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~-----~~~~~--  231 (271)
T 3kmu_A          161 FSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--EIGMKVALE-----GLRPT--  231 (271)
T ss_dssp             CTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--HHHHHHHHS-----CCCCC--
T ss_pred             eeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--HHHHHHHhc-----CCCCC--
Confidence                                       223799999999999999999 88633221  111111111     11111  


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       .+......+.+++..||+.||++|||+.+|+
T Consensus       232 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~il  262 (271)
T 3kmu_A          232 -IPPGISPHVSKLMKICMNEDPAKRPKFDMIV  262 (271)
T ss_dssp             -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -CCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence             2334456788999999999999999999874


No 35 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.4e-39  Score=300.67  Aligned_cols=211  Identities=18%  Similarity=0.251  Sum_probs=176.4

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCC
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPR  224 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  224 (376)
                      ++|...+.||+|+||.||+|.+..+ ..||+|++.....  +.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCC-CeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            5677789999999999999999765 7899999986543  789999999999999999999999999999999999999


Q ss_pred             CCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------------
Q 044707          225 EGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------------  292 (376)
Q Consensus       225 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------------  292 (376)
                      +|+|.+++..   ....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||+|            
T Consensus        89 ~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  161 (269)
T 4hcu_A           89 HGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA----CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  161 (269)
T ss_dssp             TCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred             CCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhC----CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence            9999999963   345799999999999999999999999    999999999999999999999999            


Q ss_pred             ----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCCh
Q 044707          293 ----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDM  348 (376)
Q Consensus       293 ----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~  348 (376)
                                            ++.++||||||+++|||++ |+ |+......  +... ....+     ....   .+.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~-~~~~~-----~~~~---~~~  230 (269)
T 4hcu_A          162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVE-DISTG-----FRLY---KPR  230 (269)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH-HHHTT-----CCCC---CCT
T ss_pred             ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHH-HHhcC-----ccCC---CCC
Confidence                                  5779999999999999999 78 77633221  1111 11111     1111   223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          349 HGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       349 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....+.+++.+||+.||++|||+.+++
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll  258 (269)
T 4hcu_A          231 LASTHVYQIMNHCWRERPEDRPAFSRLL  258 (269)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            3345788899999999999999999874


No 36 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.4e-39  Score=315.46  Aligned_cols=215  Identities=20%  Similarity=0.265  Sum_probs=177.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEc-------CCcEEEEEEecCCCCH----HHHHHHHHHHhcC-CCCCceeeeeeEecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLS-------EYHAFVLVKRFTGDSS----SILEAEKKAAWSM-RHKNILGLLGYHQSD  213 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~~~vavK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  213 (376)
                      .++|...+.||+|+||.||+|.+.       .++..||||++.....    +.+.+|+.+++.+ +||||++++++|...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            467888899999999999999874       2457899999976543    6788999999999 899999999999999


Q ss_pred             CceEEEeecCCCCCHhhhcCCCCC------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEE
Q 044707          214 SASVLVYPHPREGTLDNMLCPSPH------------NELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIF  281 (376)
Q Consensus       214 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NIL  281 (376)
                      +..++||||+++|+|.+++.....            ....+++..++.++.||+.||.|||+.    +|+||||||+|||
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIl  235 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVL  235 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CeeccccchhhEE
Confidence            999999999999999999964211            124689999999999999999999999    9999999999999


Q ss_pred             EeCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHH
Q 044707          282 LRHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLI  323 (376)
Q Consensus       282 l~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~  323 (376)
                      ++.++.+||+|                                   ++.++|||||||++|||++ |+ ||.... ..+.
T Consensus       236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~  315 (370)
T 2psq_A          236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  315 (370)
T ss_dssp             ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred             ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            99999999999                                   6778999999999999999 88 876322 1111


Q ss_pred             HHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          324 EWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       324 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .    ....+        .....+..+...+.+++.+||+.||++|||+.||+
T Consensus       316 ~----~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell  356 (370)
T 2psq_A          316 K----LLKEG--------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV  356 (370)
T ss_dssp             H----HHHTT--------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             H----HHhcC--------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            1    11111        11112344556788999999999999999999874


No 37 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=7.6e-40  Score=306.45  Aligned_cols=224  Identities=17%  Similarity=0.162  Sum_probs=177.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEE----cCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEec--CCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYL----SEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQS--DSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~----~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+    ..+++.||||++.....   +.+.+|+.++.+++||||+++++++..  ....
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            45678889999999999999984    45679999999987655   678899999999999999999999865  3558


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ++||||+++|+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|    
T Consensus        89 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             EEEEECCTTCBHHHHHHH---CGGGCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             EEEEEeCCCCCHHHHHHh---cccccCHHHHHHHHHHHHHHHHHHhcC----CcccCCCCHhhEEEcCCCeEEEccCccc
Confidence            999999999999999963   234699999999999999999999999    999999999999999999999999    


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhh----hhhh
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLML----QRKF  335 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~----~~~~  335 (376)
                                                      ++.++||||||+++|||++|. |+................    ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (295)
T 3ugc_A          162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL  241 (295)
T ss_dssp             C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred             ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence                                            577999999999999999999 765322221111100000    0001


Q ss_pred             hhhcccc-CCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          336 HELLEED-LDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       336 ~~~~d~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...+... ....+..++..+.+++.+||+.||++|||+.||+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~  283 (295)
T 3ugc_A          242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA  283 (295)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            1111111 1113445567889999999999999999999874


No 38 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=2.6e-39  Score=312.73  Aligned_cols=215  Identities=18%  Similarity=0.149  Sum_probs=177.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---------HHHHHHHHHHhcCCCCCceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---------SILEAEKKAAWSMRHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  216 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||+|++.....         +.+.+|+.++..++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            5678889999999999999999998889999999875432         6789999999999999999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC----CeEEcc
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL----RPMRIN  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~----~~kl~D  292 (376)
                      ++||||+++|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++    .+||+|
T Consensus        91 ~lv~e~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~~~~vkl~D  162 (361)
T 2yab_A           91 VLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK----KIAHFDLKPENIMLLDKNIPIPHIKLID  162 (361)
T ss_dssp             EEEEECCCSCBHHHHHT----TCSCCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred             EEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence            99999999999999994    356799999999999999999999999    999999999999998877    799999


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhc
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~  339 (376)
                                                      ++.++|||||||++|+|++|. ||......  +.... +..+...  .
T Consensus       163 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--~~~~~-i~~~~~~--~  237 (361)
T 2yab_A          163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLAN-ITAVSYD--F  237 (361)
T ss_dssp             CSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHH-HHTTCCC--C
T ss_pred             cCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH-HHhcCCC--C
Confidence                                            678999999999999999999 88643321  11111 1111000  0


Q ss_pred             cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ++.   ........+.+++.+||..||++|||+.|++
T Consensus       238 ~~~---~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l  271 (361)
T 2yab_A          238 DEE---FFSQTSELAKDFIRKLLVKETRKRLTIQEAL  271 (361)
T ss_dssp             CHH---HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             Cch---hccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            000   1122345678889999999999999999874


No 39 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=7.6e-40  Score=329.19  Aligned_cols=212  Identities=21%  Similarity=0.240  Sum_probs=180.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...++||+|+||.||+|.+..++..||||.+.....  +.|.+|+.++++++||||++++++|...+..+|||||+
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~  298 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM  298 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence            4567778899999999999999998789999999986543  88999999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      .+|+|.+++..  .....+++..++.|+.||+.||.|||+.    +|+||||||+|||++.++.+||+|           
T Consensus       299 ~~g~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          299 TYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT  372 (495)
T ss_dssp             TTCBHHHHHHH--SCTTTSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred             CCCCHHHHHHh--cCcCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence            99999999964  3446799999999999999999999999    999999999999999999999999           


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHHHHHHHHhhhhhhhhhccccCC-C
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLIEWARPLMLQRKFHELLEEDLD-F  345 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~~~~~~~~~~~~~~~~~d~~~~-~  345 (376)
                                             ++.++|||||||++|||++ |. |+.... ..+...             +..... .
T Consensus       373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~-------------~~~~~~~~  439 (495)
T 1opk_A          373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-------------LEKDYRME  439 (495)
T ss_dssp             EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-------------HHTTCCCC
T ss_pred             eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-------------HHcCCCCC
Confidence                                   5678999999999999999 77 776322 221111             111111 1


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+..+...+.+|+.+||+.||++|||+.+|+
T Consensus       440 ~~~~~~~~l~~li~~cl~~dP~~RPs~~el~  470 (495)
T 1opk_A          440 RPEGCPEKVYELMRACWQWNPSDRPSFAEIH  470 (495)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCcChhHCcCHHHHH
Confidence            3344556888999999999999999999874


No 40 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.8e-39  Score=299.61  Aligned_cols=212  Identities=19%  Similarity=0.213  Sum_probs=176.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+..+ ..||+|++.....  +.+.+|+.++.+++||||+++++++...+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQ-YDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTT-EEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCc-eeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            45688889999999999999988765 7899999986543  78899999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      ++|+|.+++..   ....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|           
T Consensus        86 ~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           86 SNGCLLNYLRS---HGKGLEPSQLLEMCYDVCEGMAFLESH----QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             TTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT----TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             CCCcHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            99999999953   335699999999999999999999999    999999999999999999999999           


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                             ++.++||||||+++|||++ |+ |+......  ...... ..+        .....+
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~-~~~--------~~~~~~  227 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKV-SQG--------HRLYRP  227 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHH-HTT--------CCCCCC
T ss_pred             hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHHHH-HcC--------CCCCCC
Confidence                                   4679999999999999999 88 87633221  111111 110        000112


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.+|+
T Consensus       228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll  256 (268)
T 3sxs_A          228 HLASDTIYQIMYSCWHELPEKRPTFQQLL  256 (268)
T ss_dssp             TTSCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred             CcChHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            22345788899999999999999999874


No 41 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.8e-39  Score=303.20  Aligned_cols=212  Identities=15%  Similarity=0.167  Sum_probs=171.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----------------------------HHHHHHHHHHh
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----------------------------SILEAEKKAAW  196 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----------------------------~~~~~E~~~l~  196 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....                             +.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4678889999999999999999988889999999865431                             45789999999


Q ss_pred             cCCCCCceeeeeeEec--CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecC
Q 044707          197 SMRHKNILGLLGYHQS--DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGE  274 (376)
Q Consensus       197 ~l~h~nIv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~D  274 (376)
                      +++||||+++++++.+  .+..++||||+++|+|.+++.     ...+++..+..++.|++.||.|||+.    +|+|||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~D  162 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ----KIIHRD  162 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT----TEECCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC----CeeccC
Confidence            9999999999999986  567899999999999988763     25799999999999999999999999    999999


Q ss_pred             CCCCcEEEeCCCCeEEcc------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCc
Q 044707          275 LQLHNIFLRHDLRPMRIN------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQ  317 (376)
Q Consensus       275 lkp~NILl~~~~~~kl~D------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~  317 (376)
                      |||+|||++.++.+||+|                                    ++.++|||||||++|||++|+ ||..
T Consensus       163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            999999999999999999                                    145689999999999999999 8864


Q ss_pred             ChhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          318 DYRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       318 ~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ....  .+.. ......    ..  .. ........+.+++.+||+.||++|||+.||+
T Consensus       243 ~~~~--~~~~-~~~~~~----~~--~~-~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l  291 (298)
T 2zv2_A          243 ERIM--CLHS-KIKSQA----LE--FP-DQPDIAEDLKDLITRMLDKNPESRIVVPEIK  291 (298)
T ss_dssp             SSHH--HHHH-HHHHCC----CC--CC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred             ccHH--HHHH-HHhccc----CC--CC-CccccCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence            3321  1111 111110    00  00 1123345788899999999999999999885


No 42 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=3.2e-39  Score=310.47  Aligned_cols=216  Identities=15%  Similarity=0.145  Sum_probs=173.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPR  224 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  224 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||||++..... +.+.+|+.++.+++||||+++++++...+..++||||++
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  131 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT  131 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence            5778999999999999999999998889999999986544 678899999999999999999999999999999999999


Q ss_pred             CCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC---CCCeEEcc---------
Q 044707          225 EGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH---DLRPMRIN---------  292 (376)
Q Consensus       225 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~---~~~~kl~D---------  292 (376)
                      +|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.   ++.+||+|         
T Consensus       132 ~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          132 GGELFDRIV----EKGYYSERDAADAVKQILEAVAYLHEN----GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             SCBHHHHHT----TCSSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             CCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            999999994    346799999999999999999999999    9999999999999975   88999999         


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCCh
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDM  348 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~  348 (376)
                                             ++.++|||||||++|||++|+ ||.......  ........+..     ........
T Consensus       204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~i~~~~~-----~~~~~~~~  276 (349)
T 2w4o_A          204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMFRRILNCEY-----YFISPWWD  276 (349)
T ss_dssp             ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHHHHHHTTCC-----CCCTTTTT
T ss_pred             ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHHHHHHhCCC-----ccCCchhh
Confidence                                   678999999999999999999 886333221  01111111110     00011223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          349 HGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       349 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....+.+++.+||+.||++|||+.+++
T Consensus       277 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l  304 (349)
T 2w4o_A          277 EVSLNAKDLVRKLIVLDPKKRLTTFQAL  304 (349)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             hCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            3456788899999999999999999874


No 43 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=2.7e-39  Score=315.00  Aligned_cols=225  Identities=16%  Similarity=0.164  Sum_probs=176.9

Q ss_pred             hcCCCCCceecCC--CCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGEC--KNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G--~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...++||+|  +||.||+|.+..+++.||||++.....     +.+.+|+.+++.++|||||++++++...+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4568888999999  999999999998889999999975432     667889999999999999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..  .....+++..+..|+.||+.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       104 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          104 VTSFMAYGSAKDLICT--HFMDGMNELAIAYILQGVLKALDYIHHM----GYVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             EEECCTTCBHHHHHHH--TCTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEEccCCCCHHHHHhh--hcccCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence            9999999999999965  3346799999999999999999999999    999999999999999999999998      


Q ss_pred             ------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh--hhHHHHHHHHhhh-
Q 044707          293 ------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY--RSLIEWARPLMLQ-  332 (376)
Q Consensus       293 ------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~--~~l~~~~~~~~~~-  332 (376)
                                                          ++.++|||||||++|||++|+ ||....  ..+.......... 
T Consensus       178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  257 (389)
T 3gni_B          178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL  257 (389)
T ss_dssp             CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred             eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence                                                467899999999999999999 886321  1111111000000 


Q ss_pred             --------h-------------hhhhhcc--------cc--CCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 --------R-------------KFHELLE--------ED--LDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 --------~-------------~~~~~~d--------~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                              .             .....+.        ..  ....+......+.+|+.+||+.||++|||+.|+|
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell  332 (389)
T 3gni_B          258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL  332 (389)
T ss_dssp             ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred             ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence                    0             0000000        00  0001223345788899999999999999999885


No 44 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-39  Score=309.12  Aligned_cols=217  Identities=17%  Similarity=0.195  Sum_probs=179.3

Q ss_pred             HhcCCCCCceecCCCCEEEEEEEEc-----CCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCc
Q 044707          145 ITDKFTTKALMGECKNYVGYLGYLS-----EYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSA  215 (376)
Q Consensus       145 ~~~~f~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  215 (376)
                      ..++|...+.||+|+||.||+|.+.     .+++.||||++.....    +.+.+|+.++++++||||+++++++...+.
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence            3678999999999999999999986     3458999999986543    678899999999999999999999999999


Q ss_pred             eEEEeecCCCCCHhhhcCCCCC--------------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCC
Q 044707          216 SVLVYPHPREGTLDNMLCPSPH--------------------NELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGEL  275 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dl  275 (376)
                      .++||||+++|+|.+++.....                    ....+++..++.|+.||+.||.|||+.    +|+||||
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dl  200 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER----KFVHRDL  200 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCC
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCC
Confidence            9999999999999999964211                    126799999999999999999999999    9999999


Q ss_pred             CCCcEEEeCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcC
Q 044707          276 QLHNIFLRHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQD  318 (376)
Q Consensus       276 kp~NILl~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~  318 (376)
                      ||+|||++.++.+||+|                                   ++.++||||||+++|||++ |. |+...
T Consensus       201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  280 (343)
T 1luf_A          201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM  280 (343)
T ss_dssp             SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence            99999999999999999                                   6779999999999999999 88 88633


Q ss_pred             hhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          319 YRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       319 ~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...  +.. .....+        .....+......+.+++.+||+.||++|||+.+|+
T Consensus       281 ~~~--~~~-~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~  327 (343)
T 1luf_A          281 AHE--EVI-YYVRDG--------NILACPENCPLELYNLMRLCWSKLPADRPSFCSIH  327 (343)
T ss_dssp             CHH--HHH-HHHHTT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ChH--HHH-HHHhCC--------CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence            221  111 111111        11112334456788999999999999999998873


No 45 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=4.2e-39  Score=301.14  Aligned_cols=222  Identities=17%  Similarity=0.139  Sum_probs=175.1

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      ++|...++||+|+||+||+|.+..+++.||+|++.....     ..+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            468888999999999999999998889999999975432     678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+.+ +|.+.+.   .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|         
T Consensus        82 ~~~~-~l~~~~~---~~~~~l~~~~~~~~~~ql~~~l~~lH~~----~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           82 FCDQ-DLKKYFD---SCNGDLDPEIVKSFLFQLLKGLGFCHSR----NVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCSE-EHHHHHH---HTTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             cCCC-CHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            9986 5555553   3356799999999999999999999999    999999999999999999999999         


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh--hHHHHHHHHhhh---hhhhhhc--
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR--SLIEWARPLMLQ---RKFHELL--  339 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~--~l~~~~~~~~~~---~~~~~~~--  339 (376)
                                               ++.++|||||||++|||++|. |+.....  .....+......   ..+....  
T Consensus       154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  233 (292)
T 3o0g_A          154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence                                     578999999999999999998 7653221  111111111110   0000000  


Q ss_pred             -c----------ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 -E----------EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 -d----------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       +          .............+.+++.+||+.||++|||+.|++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  281 (292)
T 3o0g_A          234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL  281 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHh
Confidence             0          000011223456788899999999999999999874


No 46 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=3.6e-39  Score=299.90  Aligned_cols=212  Identities=19%  Similarity=0.192  Sum_probs=174.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+..+ ..||+|++.....  +.+.+|+.++.+++|+||+++++++.+.+..++||||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTT-EEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCC-CeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            45677889999999999999998754 7899999986543  78999999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      .+|+|.+++..   ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|           
T Consensus       102 ~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  174 (283)
T 3gen_A          102 ANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLESK----QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  174 (283)
T ss_dssp             TTCBHHHHHHC---GGGCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred             CCCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence            99999999963   245699999999999999999999999    999999999999999999999999           


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                             ++.++||||||+++|||++ |+ ||......  .... ....     .....   .+
T Consensus       175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~-~~~~-----~~~~~---~~  243 (283)
T 3gen_A          175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAE-HIAQ-----GLRLY---RP  243 (283)
T ss_dssp             HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH-HHHT-----TCCCC---CC
T ss_pred             cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHH-HHhc-----ccCCC---CC
Confidence                                   5779999999999999998 88 87633221  1111 1111     11111   22


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.+|+
T Consensus       244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll  272 (283)
T 3gen_A          244 HLASEKVYTIMYSCWHEKADERPTFKILL  272 (283)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred             CcCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence            23345788899999999999999999874


No 47 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=2.2e-39  Score=317.33  Aligned_cols=218  Identities=13%  Similarity=0.156  Sum_probs=170.9

Q ss_pred             hcCCCCC-ceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHh-cCCCCCceeeeeeEec----CCceEEE
Q 044707          146 TDKFTTK-ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAW-SMRHKNILGLLGYHQS----DSASVLV  219 (376)
Q Consensus       146 ~~~f~~~-~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~----~~~~~lv  219 (376)
                      .++|... +.||+|+||+||+|.+..+++.||||++...  ..+.+|+.++. ..+||||+++++++..    .+..+||
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv  137 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV  137 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence            4566654 6899999999999999988899999999643  56778888874 4589999999998875    5678999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC---CCCeEEcc----
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH---DLRPMRIN----  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~---~~~~kl~D----  292 (376)
                      |||+.+|+|.+++..  .....+++..+..|+.||+.||.|||+.    +|+||||||+|||++.   ++.+||+|    
T Consensus       138 ~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          138 MECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSI----NIAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EECCCSEEHHHHHHC--C---CCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCcHHHHHHH--hCCCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCcCcceEEEecCCCCccEEEEecccc
Confidence            999999999999975  3345799999999999999999999999    9999999999999998   78899999    


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhh-HHHHHHHHhhhhhhhhhcccc
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRS-LIEWARPLMLQRKFHELLEED  342 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~-l~~~~~~~~~~~~~~~~~d~~  342 (376)
                                                  ++.++|||||||++|||++|+ ||...... ........+..+... ...+ 
T Consensus       212 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~-~~~~-  289 (400)
T 1nxk_A          212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-FPNP-  289 (400)
T ss_dssp             EECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC-CCTT-
T ss_pred             cccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc-CCCc-
Confidence                                        678999999999999999999 88633211 000000111111110 0000 


Q ss_pred             CCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          343 LDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       343 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ........+.+|+.+||+.||++|||+.||+
T Consensus       290 ---~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil  320 (400)
T 1nxk_A          290 ---EWSEVSEEVKMLIRNLLKTEPTQRMTITEFM  320 (400)
T ss_dssp             ---TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             ---ccccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence               1223456788899999999999999999874


No 48 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=6.7e-39  Score=309.84  Aligned_cols=216  Identities=16%  Similarity=0.110  Sum_probs=178.2

Q ss_pred             HhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          145 ITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       145 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      ..++|...+.||+|+||.||+|.+..+++.||+|++.....     +.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            35679999999999999999999998889999999975432     6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC---CeEEcc----
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL---RPMRIN----  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~---~~kl~D----  292 (376)
                      |||+.+|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++   .+||+|    
T Consensus       107 ~e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a  178 (362)
T 2bdw_A          107 FDLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLA  178 (362)
T ss_dssp             ECCCCSCBHHHHHT----TCSCCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence            99999999999994    346799999999999999999999999    999999999999998654   599999    


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccC
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDL  343 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~  343 (376)
                                                  ++.++|||||||++|+|++|. ||......  ... .....+..    +.. 
T Consensus       179 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~-~~i~~~~~----~~~-  250 (362)
T 2bdw_A          179 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLY-AQIKAGAY----DYP-  250 (362)
T ss_dssp             BCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH-HHHHHTCC----CCC-
T ss_pred             eEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHH-HHHHhCCC----CCC-
Confidence                                        678999999999999999999 88643321  111 11111111    000 


Q ss_pred             CCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          344 DFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       344 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..........+.+++.+||+.||++|||+.+++
T Consensus       251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  283 (362)
T 2bdw_A          251 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL  283 (362)
T ss_dssp             TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             cccccCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            001223446788899999999999999999875


No 49 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=1.8e-39  Score=309.17  Aligned_cols=210  Identities=17%  Similarity=0.192  Sum_probs=170.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcE----EEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHA----FVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASV  217 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  217 (376)
                      .++|...++||+|+||.||+|.+..+++    +||+|.+.....    +.+.+|+.++.+++||||++++++|.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            4568888999999999999999876544    468888864332    78899999999999999999999998754 78


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----  292 (376)
                      +|+||+.+|+|.+++..   ....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|     
T Consensus        93 ~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~Dikp~NIll~~~~~~kl~Dfg~a~  165 (327)
T 3poz_A           93 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             EEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred             EEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC----CeeCCCCChheEEECCCCCEEEccCccee
Confidence            99999999999999963   346799999999999999999999999    999999999999999999999999     


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChh-hHHHHHHHHhhhhhhhhhc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYR-SLIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~-~l~~~~~~~~~~~~~~~~~  339 (376)
                                                    ++.++|||||||++|||++ |+ ||..... .+..             .+
T Consensus       166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-------------~~  232 (327)
T 3poz_A          166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-------------IL  232 (327)
T ss_dssp             HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-------------HH
T ss_pred             EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH-------------HH
Confidence                                          6789999999999999999 88 8863322 1111             11


Q ss_pred             cccCC-CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLD-FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..... ..+..+...+.+++.+||+.||++|||+.+|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  270 (327)
T 3poz_A          233 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI  270 (327)
T ss_dssp             HTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHH
T ss_pred             HcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            11111 12344556788999999999999999999874


No 50 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.2e-39  Score=311.93  Aligned_cols=210  Identities=15%  Similarity=0.177  Sum_probs=176.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....      ..+.+|+.+++.++||||+++++++...+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            4678889999999999999999988889999999864322      6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+ +|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        88 ~E~~-~g~l~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           88 IEYA-GGELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCHRH----KIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             ECCC-CEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHH----TCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             EECC-CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            9999 689999884    346799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                .+.++|||||||++|+|++|+ ||......            .+...+......
T Consensus       159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------------~~~~~i~~~~~~  226 (336)
T 3h4j_B          159 TDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP------------NLFKKVNSCVYV  226 (336)
T ss_dssp             TTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST------------TCBCCCCSSCCC
T ss_pred             cCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH------------HHHHHHHcCCCC
Confidence                                      257899999999999999999 88632211            011111111111


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||.+|||+.||+
T Consensus       227 ~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil  257 (336)
T 3h4j_B          227 MPDFLSPGAQSLIRRMIVADPMQRITIQEIR  257 (336)
T ss_dssp             CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHT
T ss_pred             CcccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            2334456788899999999999999999875


No 51 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=4.7e-39  Score=298.08  Aligned_cols=210  Identities=18%  Similarity=0.205  Sum_probs=166.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....      ..+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (275)
T 2eue_A           12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred             ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence            4679999999999999999999988889999999875432      6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+ +++|.+++..    ...+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        92 ~e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  162 (275)
T 2eue_A           92 IEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIM  162 (275)
T ss_dssp             EECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred             ehhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC----CCeeccCChHhEEECCCCCEEEeecccceec
Confidence            9999 6788888843    45799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                .+.++||||||+++|||++|+ ||.......  .. .....+.        . .
T Consensus       163 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~-~~~~~~~--------~-~  230 (275)
T 2eue_A          163 TDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LF-KNISNGV--------Y-T  230 (275)
T ss_dssp             ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-HHHHHTC--------C-C
T ss_pred             cCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HH-HHHHhCC--------C-C
Confidence                                      267899999999999999999 887433221  11 1111110        0 1


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||.+|||+.|++
T Consensus       231 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l  261 (275)
T 2eue_A          231 LPKFLSPGAAGLIKRMLIVNPLNRISIHEIM  261 (275)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             CCccCCHHHHHHHHHHhhcCHhHCCCHHHHh
Confidence            2233345788899999999999999999985


No 52 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=3.4e-39  Score=305.91  Aligned_cols=213  Identities=16%  Similarity=0.137  Sum_probs=171.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCC-------
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDS-------  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-------  214 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....    +.+.+|+.++++++||||++++++|.+..       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            4678888999999999999999998889999999874332    77899999999999999999999986543       


Q ss_pred             --------------------------------------------------ceEEEeecCCCCCHhhhcCCCCCCCCCCCH
Q 044707          215 --------------------------------------------------ASVLVYPHPREGTLDNMLCPSPHNELKLKF  244 (376)
Q Consensus       215 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~  244 (376)
                                                                        ..++||||+++|+|.+++... ......++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~  163 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR-CSLEDREH  163 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC-CSGGGSCH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc-cCccchhh
Confidence                                                              279999999999999999753 23345677


Q ss_pred             HHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------------------------------
Q 044707          245 QQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------------------------------  292 (376)
Q Consensus       245 ~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------------------------------  292 (376)
                      ..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|                                
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             HHHHHHHHHHHHHHHHHHhC----CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            88999999999999999999    999999999999999999999998                                


Q ss_pred             -------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHH
Q 044707          293 -------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAA  358 (376)
Q Consensus       293 -------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~  358 (376)
                                   ++.++|||||||++|||++|. |+.... .   .. ..        ......+.........+.+++
T Consensus       240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~---~~-~~--------~~~~~~~~~~~~~~~~~~~li  306 (332)
T 3qd2_B          240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-R---II-TD--------VRNLKFPLLFTQKYPQEHMMV  306 (332)
T ss_dssp             GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-H---HH-HH--------HHTTCCCHHHHHHCHHHHHHH
T ss_pred             cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-H---HH-HH--------hhccCCCcccccCChhHHHHH
Confidence                         467899999999999999998 532110 0   00 01        111111112233345678899


Q ss_pred             HHccccCCCCCCCccccC
Q 044707          359 TQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       359 ~~Cl~~dP~~RPs~~evl  376 (376)
                      .+||+.||++|||+.||+
T Consensus       307 ~~~l~~~p~~Rps~~~~l  324 (332)
T 3qd2_B          307 QDMLSPSPTERPEATDII  324 (332)
T ss_dssp             HHHHCSSGGGSCCHHHHH
T ss_pred             HHHccCCCCcCCCHHHHh
Confidence            999999999999999874


No 53 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.2e-39  Score=307.45  Aligned_cols=214  Identities=17%  Similarity=0.133  Sum_probs=176.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC---------HHHHHHHHHHHhcCCCCCceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS---------SSILEAEKKAAWSMRHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  216 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||+|++....         .+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            456888899999999999999999888999999986532         26789999999999999999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC----CeEEcc
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL----RPMRIN  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~----~~kl~D  292 (376)
                      ++||||+++|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++    .+||+|
T Consensus        90 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~~kl~D  161 (326)
T 2y0a_A           90 ILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL----QIAHFDLKPENIMLLDRNVPKPRIKIID  161 (326)
T ss_dssp             EEEEECCCSCBHHHHHT----TSSCCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred             EEEEEcCCCCCHHHHHH----hcCCcCHHHHHHHHHHHHHHHHHHHHC----CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence            99999999999999994    356799999999999999999999999    999999999999999887    799999


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhc
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~  339 (376)
                                                      ++.++|||||||++|+|++|. ||......  +..... ...      
T Consensus       162 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~-~~~------  232 (326)
T 2y0a_A          162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANV-SAV------  232 (326)
T ss_dssp             CTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHH-HHT------
T ss_pred             CCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHH-Hhc------
Confidence                                            677999999999999999999 88643221  111111 100      


Q ss_pred             cccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...... ........+.+++.+||+.||++|||+.+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  270 (326)
T 2y0a_A          233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL  270 (326)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            000000 1122345678889999999999999999874


No 54 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=2.3e-39  Score=310.15  Aligned_cols=210  Identities=15%  Similarity=0.129  Sum_probs=177.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|....+++.||+|++....      ...+.+|+.+++.++||||+++++++...+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            467888899999999999999999888999999996532      26788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++.    ....+++..+..++.||+.||+|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        84 ~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A           84 MEYANGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            99999999999994    346799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++|||||||++|||++|+ ||......  ....... .        .... 
T Consensus       156 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~-~--------~~~~-  223 (337)
T 1o6l_A          156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELIL-M--------EEIR-  223 (337)
T ss_dssp             CCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH-H--------CCCC-
T ss_pred             ccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHHHHH-c--------CCCC-
Confidence                                      678999999999999999999 88643321  1111111 1        1111 


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCC-----Ccccc
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRP-----CMSEV  375 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev  375 (376)
                      .+......+.+++.+||+.||++||     ++.||
T Consensus       224 ~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei  258 (337)
T 1o6l_A          224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV  258 (337)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHH
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHH
Confidence            2233445788888999999999999     77765


No 55 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=2.8e-39  Score=311.18  Aligned_cols=234  Identities=16%  Similarity=0.159  Sum_probs=182.6

Q ss_pred             cccHHHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCC-----CCCceeeee
Q 044707          136 QLSWEVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMR-----HKNILGLLG  208 (376)
Q Consensus       136 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~-----h~nIv~l~~  208 (376)
                      .|++.+.....++|...++||+|+||.||+|.+..+++.||||++.....  +.+..|+.++..++     ||||+++++
T Consensus        24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            44444444557889999999999999999999988889999999985443  67788999999986     999999999


Q ss_pred             eEecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC----
Q 044707          209 YHQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH----  284 (376)
Q Consensus       209 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~----  284 (376)
                      ++...+..++||||+ +++|.+++..  .....+++..+..|+.||+.||.|||+.    +|+||||||+|||++.    
T Consensus       104 ~~~~~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~  176 (360)
T 3llt_A          104 KFMYYDHMCLIFEPL-GPSLYEIITR--NNYNGFHIEDIKLYCIEILKALNYLRKM----SLTHTDLKPENILLDDPYFE  176 (360)
T ss_dssp             EEEETTEEEEEECCC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCTTCC
T ss_pred             eeeECCeeEEEEcCC-CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCcccEEEcccccc
Confidence            999999999999999 8899999965  4445699999999999999999999999    9999999999999975    


Q ss_pred             ---------------------CCCeEEcc------------------------------CCCcchhhhHHHHHHHHHhCC
Q 044707          285 ---------------------DLRPMRIN------------------------------AITKIRCLLFGVLLLRLFCRR  313 (376)
Q Consensus       285 ---------------------~~~~kl~D------------------------------~~~~~Dv~S~Gvvl~elltg~  313 (376)
                                           ++.+||+|                              ++.++|||||||++|||++|+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  256 (360)
T 3llt_A          177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS  256 (360)
T ss_dssp             EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence                                 78899999                              788999999999999999999


Q ss_pred             -CCCcCh-hhHHHHHHHHhhh-----------hhhhhhcccc-----CCC--C---------------ChHHHHHHHHHH
Q 044707          314 -SMPQDY-RSLIEWARPLMLQ-----------RKFHELLEED-----LDF--S---------------DMHGIYRVMAAA  358 (376)
Q Consensus       314 -P~~~~~-~~l~~~~~~~~~~-----------~~~~~~~d~~-----~~~--~---------------~~~~~~~l~~l~  358 (376)
                       ||.... ......+......           ......++..     .+.  .               .......+.+|+
T Consensus       257 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  336 (360)
T 3llt_A          257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFL  336 (360)
T ss_dssp             CSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHH
Confidence             886322 2211111111100           0000000000     000  0               000115677899


Q ss_pred             HHccccCCCCCCCccccC
Q 044707          359 TQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       359 ~~Cl~~dP~~RPs~~evl  376 (376)
                      .+||+.||++|||+.|||
T Consensus       337 ~~~L~~dP~~Rpta~elL  354 (360)
T 3llt_A          337 YSILQIDPTLRPSPAELL  354 (360)
T ss_dssp             HHHCCSSGGGSCCHHHHT
T ss_pred             HHHhcCChhhCCCHHHHh
Confidence            999999999999999986


No 56 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=3.9e-39  Score=320.23  Aligned_cols=211  Identities=19%  Similarity=0.239  Sum_probs=176.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCceeeeeeEecCC-ceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNILGLLGYHQSDS-ASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+.  ++.||||+++.... +.+.+|+.++++++||||+++++++.... ..++||||+
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~  269 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM  269 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence            456777889999999999999986  57999999987655 88999999999999999999999987665 789999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      ++|+|.+++..  .....+++..+..++.||+.||+|||+.    +|+||||||+|||++.++.+||+|           
T Consensus       270 ~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  343 (450)
T 1k9a_A          270 AKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  343 (450)
T ss_dssp             TTCBHHHHHHH--HCTTTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             CCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence            99999999964  3344589999999999999999999999    999999999999999999999999           


Q ss_pred             -------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHHHHHHHHhhhhhhhhhccccCCCCChHH
Q 044707          293 -------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLIEWARPLMLQRKFHELLEEDLDFSDMHG  350 (376)
Q Consensus       293 -------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~  350 (376)
                                         ++.++|||||||++|||++ |+ |+.... ..+..    ....+     ..  + ..+..+
T Consensus       344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~----~i~~~-----~~--~-~~p~~~  411 (450)
T 1k9a_A          344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP----RVEKG-----YK--M-DAPDGC  411 (450)
T ss_dssp             ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH----HHHTT-----CC--C-CCCTTC
T ss_pred             cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----HHHcC-----CC--C-CCCCcC
Confidence                               6789999999999999998 88 886322 11111    11111     00  1 133445


Q ss_pred             HHHHHHHHHHccccCCCCCCCccccC
Q 044707          351 IYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       351 ~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +..+.+|+.+||+.||++|||+.+|+
T Consensus       412 ~~~l~~li~~cl~~dp~~Rpt~~~l~  437 (450)
T 1k9a_A          412 PPAVYDVMKNCWHLDAATRPTFLQLR  437 (450)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            67888999999999999999999873


No 57 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=4e-39  Score=306.75  Aligned_cols=210  Identities=16%  Similarity=0.112  Sum_probs=171.7

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCC-CCCceeeeeeEecCCceEEEeecCCCCCHhh
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMR-HKNILGLLGYHQSDSASVLVYPHPREGTLDN  230 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  230 (376)
                      .+.||+|+||.||+|.+..+++.||||++.......+.+|+.++..+. ||||+++++++.+....++||||+++|+|.+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence            478999999999999999888999999998776688889999999997 9999999999999999999999999999999


Q ss_pred             hcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC---CeEEcc---------------
Q 044707          231 MLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL---RPMRIN---------------  292 (376)
Q Consensus       231 ~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~---~~kl~D---------------  292 (376)
                      ++.    ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++   .+||+|               
T Consensus        96 ~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~  167 (325)
T 3kn6_A           96 RIK----KKKHFSETEASYIMRKLVSAVSHMHDV----GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK  167 (325)
T ss_dssp             HHH----HCSCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred             HHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccc
Confidence            995    346799999999999999999999999    999999999999998765   789999               


Q ss_pred             ------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhh-----HHHHHHHHhhhhhhhhhccccCCC-CC
Q 044707          293 ------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRS-----LIEWARPLMLQRKFHELLEEDLDF-SD  347 (376)
Q Consensus       293 ------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~-----l~~~~~~~~~~~~~~~~~d~~~~~-~~  347 (376)
                                        ++.++|||||||++|||++|+ ||......     ..+.. ..+..+..      .... ..
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-~~i~~~~~------~~~~~~~  240 (325)
T 3kn6_A          168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM-KKIKKGDF------SFEGEAW  240 (325)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH-HHHTTTCC------CCCSHHH
T ss_pred             ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH-HHHHcCCC------CCCcccc
Confidence                              577899999999999999999 88632211     11111 11111110      0000 11


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+|+.+||+.||.+|||+.+|+
T Consensus       241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             HTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             cCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence            22356788899999999999999999985


No 58 
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.5e-39  Score=301.92  Aligned_cols=212  Identities=11%  Similarity=0.033  Sum_probs=173.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||||++.....      +.+.+|+.++.+++||||+++++++...+..++|
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            3568888999999999999999998889999999986532      6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------C
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------A  293 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------~  293 (376)
                      |||+++++|.+++..      .....++..|+.|++.||.|||+.    +|+||||||+|||++.++.+||++      +
T Consensus       110 ~e~~~g~~L~~~l~~------~~~~~~~~~i~~ql~~aL~~lH~~----givH~Dikp~NIll~~~g~~kl~~~~~~~~~  179 (286)
T 3uqc_A          110 AEWIRGGSLQEVADT------SPSPVGAIRAMQSLAAAADAAHRA----GVALSIDHPSRVRVSIDGDVVLAYPATMPDA  179 (286)
T ss_dssp             EECCCEEEHHHHHTT------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEEETTSCEEECSCCCCTTC
T ss_pred             EEecCCCCHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHC----CCccCCCCcccEEEcCCCCEEEEeccccCCC
Confidence            999999999999953      135567889999999999999999    999999999999999999999988      7


Q ss_pred             CCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC---CChHHHHHHHHHHHHccccCCCCC
Q 044707          294 ITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF---SDMHGIYRVMAAATQCTISKPTSR  369 (376)
Q Consensus       294 ~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~l~~l~~~Cl~~dP~~R  369 (376)
                      +.++|||||||++|||+||+ ||......      ..+.  .....+......   ........+.+++.+||+.||++|
T Consensus       180 ~~~~Di~slG~il~elltg~~Pf~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  251 (286)
T 3uqc_A          180 NPQDDIRGIGASLYALLVNRWPLPEAGVR------SGLA--PAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR  251 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHSEECSCCCSBC------CCSE--ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC
T ss_pred             CchhHHHHHHHHHHHHHHCCCCCCcCCcc------hhhH--HHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC
Confidence            89999999999999999999 98732211      0000  000000110000   123345678899999999999999


Q ss_pred             CCccccC
Q 044707          370 PCMSEVL  376 (376)
Q Consensus       370 Ps~~evl  376 (376)
                       |+.|++
T Consensus       252 -s~~el~  257 (286)
T 3uqc_A          252 -SASTLL  257 (286)
T ss_dssp             -CHHHHH
T ss_pred             -CHHHHH
Confidence             998874


No 59 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=6.9e-40  Score=309.84  Aligned_cols=210  Identities=14%  Similarity=0.007  Sum_probs=169.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...++||+|+||+||+|.+..+++.||||++.....     ..+..|+..+.++ +|+||++++++|.+++..++|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv  135 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ  135 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence            3579999999999999999999998889999999865432     3445566555554 899999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+ +|+|.+++..   ....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus       136 ~e~~-~~~L~~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~  207 (311)
T 3p1a_A          136 TELC-GPSLQQHCEA---WGASLPEAQVWGYLRDTLLALAHLHSQ----GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL  207 (311)
T ss_dssp             EECC-CCBHHHHHHH---HCSCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred             Eecc-CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC----CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence            9999 6699998853   345799999999999999999999999    999999999999999999999999       


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                              ++.++|||||||++|||++|. ++.... ..     ..+..+.....       .+
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-~~-----~~~~~~~~~~~-------~~  274 (311)
T 3p1a_A          208 GTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE-GW-----QQLRQGYLPPE-------FT  274 (311)
T ss_dssp             C------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH-HH-----HHHTTTCCCHH-------HH
T ss_pred             ccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-HH-----HHHhccCCCcc-------cc
Confidence                                    567899999999999999998 554211 11     11111111111       11


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.||+
T Consensus       275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell  303 (311)
T 3p1a_A          275 AGLSSELRSVLVMMLEPDPKLRATAEALL  303 (311)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            22345788899999999999999999874


No 60 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=7.5e-39  Score=300.35  Aligned_cols=215  Identities=14%  Similarity=0.165  Sum_probs=175.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..++..||+|.+.....      +.+.+|+.++.+++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            3568888999999999999999988889999999854322      6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        90 ~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A           90 MEYIEGPTLSEYIE----SHGPLSVDTAINFTNQILDGIKHAHDM----RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             EECCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred             EeCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence            99999999999994    345799999999999999999999999    999999999999999999999999       


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++||||||+++|||++|+ ||......  ......... ...... ..  
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--~~~~~~~~~-~~~~~~-~~--  235 (294)
T 4eqm_A          162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--SIAIKHIQD-SVPNVT-TD--  235 (294)
T ss_dssp             -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--HHHHHHHSS-CCCCHH-HH--
T ss_pred             ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHhhc-cCCCcc-hh--
Confidence                                       567899999999999999999 88743321  111111111 000000 00  


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCC-Ccccc
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRP-CMSEV  375 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~ev  375 (376)
                       .....+..+.+++.+||+.||.+|| ++.++
T Consensus       236 -~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l  266 (294)
T 4eqm_A          236 -VRKDIPQSLSNVILRATEKDKANRYKTIQEM  266 (294)
T ss_dssp             -SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHH
T ss_pred             -cccCCCHHHHHHHHHHhcCCHhHccccHHHH
Confidence             2233446788899999999999999 55543


No 61 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-38  Score=301.91  Aligned_cols=225  Identities=13%  Similarity=0.098  Sum_probs=178.5

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCC--ceEEEe
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDS--ASVLVY  220 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lv~  220 (376)
                      +.|...++||+|+||.||+|.+..+++.||||++.....    +.+.+|+.++++++||||+++++++...+  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            568888999999999999999998889999999975432    77889999999999999999999988755  679999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE----eCCCCeEEcc----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL----RHDLRPMRIN----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl----~~~~~~kl~D----  292 (376)
                      ||+++|+|.+++... .....+++..++.|+.|++.||.|||+.    +|+||||||+|||+    +.++.+||+|    
T Consensus        89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           89 EFCPCGSLYTVLEEP-SNAYGLPESEFLIVLRDVVGGMNHLREN----GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             ECCTTCBHHHHHHSG-GGTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred             eCCCCCCHHHHHHHh-ccccCCCHHHHHHHHHHHHHHHHHHHHC----CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence            999999999999652 2233499999999999999999999999    99999999999999    7778899999    


Q ss_pred             ------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCc--ChhhHHHHHHHHhhhh
Q 044707          293 ------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQ--DYRSLIEWARPLMLQR  333 (376)
Q Consensus       293 ------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~--~~~~l~~~~~~~~~~~  333 (376)
                                                          ++.++|||||||++|||++|+ ||..  ......+.+.......
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (319)
T 4euu_A          164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (319)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred             eecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence                                                346899999999999999999 8852  1122222222222110


Q ss_pred             ---hhhhh---------ccccCC---CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 ---KFHEL---------LEEDLD---FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ---~~~~~---------~d~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         .+..+         ....+.   .........+.+++.+||+.||++|||+.|++
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell  301 (319)
T 4euu_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF  301 (319)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHH
T ss_pred             CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhh
Confidence               00000         000111   14466777889999999999999999999874


No 62 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2.1e-39  Score=322.46  Aligned_cols=212  Identities=17%  Similarity=0.223  Sum_probs=176.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+..+ ..||||+++....  +.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~  264 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM  264 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTT-EEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred             hHHeEEEEEcccCCceEEEEEEECCc-cEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence            56788889999999999999999765 7899999986543  88999999999999999999999986 56789999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      .+|+|.+++..  .....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|           
T Consensus       265 ~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~  338 (454)
T 1qcf_A          265 AKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQR----NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE  338 (454)
T ss_dssp             TTCBHHHHHHS--HHHHTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred             CCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence            99999999964  2234689999999999999999999999    999999999999999999999999           


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                             ++.++|||||||++|||+| |+ |+......  +.. ..+..+     .  .+ ..+
T Consensus       339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~-~~i~~~-----~--~~-~~~  407 (454)
T 1qcf_A          339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVI-RALERG-----Y--RM-PRP  407 (454)
T ss_dssp             HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH-HHHHHT-----C--CC-CCC
T ss_pred             eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHH-HHHHcC-----C--CC-CCC
Confidence                                   6789999999999999999 88 88632211  111 111111     0  01 123


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..++..+.+|+.+||+.||++|||+.+|+
T Consensus       408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~  436 (454)
T 1qcf_A          408 ENCPEELYNIMMRCWKNRPEERPTFEYIQ  436 (454)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence            44556888999999999999999998873


No 63 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.2e-38  Score=301.08  Aligned_cols=214  Identities=20%  Similarity=0.221  Sum_probs=172.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...++||+|+||.||+|.+..   .+|+|.++....     +.+.+|+.++++++||||+++++++. .+..++||
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~  110 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT  110 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence            4568888999999999999998753   488888775332     67889999999999999999999865 45689999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+.+|+|.+++.   .....+++.++..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus       111 e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~  183 (307)
T 3lb7_A          111 QWCEGSSLYKHLH---VQETKFQMFQLIDIARQTAQGMDYLHAK----NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             ECCSSCBHHHHHH---TSCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred             ecCCCCcHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHhC----CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence            9999999999996   3456799999999999999999999999    999999999999999999999999        


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEE  341 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~  341 (376)
                                                    ++.++|||||||++|||++|+ ||......  +........    ....+
T Consensus       184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~--~~~~~~~~~----~~~~~  257 (307)
T 3lb7_A          184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFMVGR----GYASP  257 (307)
T ss_dssp             ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHH----TCCCC
T ss_pred             cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH--HHHHHHHhc----CCCCc
Confidence                                          355899999999999999999 88632211  011111111    11122


Q ss_pred             cCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          342 DLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       342 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+...+.+++.+||+.||++|||+.+|+
T Consensus       258 ~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il  292 (307)
T 3lb7_A          258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL  292 (307)
T ss_dssp             CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHH
T ss_pred             chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHH
Confidence            22223334556888999999999999999999874


No 64 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.1e-39  Score=311.95  Aligned_cols=218  Identities=17%  Similarity=0.140  Sum_probs=176.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCC--------CHHHHHHHHHHHhcCCCCCceeeeeeEecCCceE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGD--------SSSILEAEKKAAWSMRHKNILGLLGYHQSDSASV  217 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  217 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||||++...        ..+.+.+|+.+++.++||||+++++++...+..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            45688889999999999999999988899999998532        2367899999999999999999999999999999


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC---eEEcc--
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR---PMRIN--  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~---~kl~D--  292 (376)
                      +||||+++|+|.+++.........+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.   +||+|  
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~----~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg  178 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN----NIIHRDVKPHCVLLASKENSAPVKLGGFG  178 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC----CceeccCChHHeEEecCCCCCcEEEecCc
Confidence            99999999999888753212345689999999999999999999999    9999999999999987655   89999  


Q ss_pred             -------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhcc
Q 044707          293 -------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 -------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                     ++.++|||||||++|||++|+ ||......+..    ....+...  ..
T Consensus       179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~i~~~~~~--~~  252 (351)
T 3c0i_A          179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE----GIIKGKYK--MN  252 (351)
T ss_dssp             TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHH----HHHHTCCC--CC
T ss_pred             ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHH----HHHcCCCC--CC
Confidence                                           678999999999999999999 88754332211    11111100  00


Q ss_pred             ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +.   ........+.+++.+||+.||++|||+.+++
T Consensus       253 ~~---~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l  285 (351)
T 3c0i_A          253 PR---QWSHISESAKDLVRRMLMLDPAERITVYEAL  285 (351)
T ss_dssp             HH---HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             cc---ccccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            00   0112345788899999999999999999874


No 65 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=4e-39  Score=313.74  Aligned_cols=212  Identities=14%  Similarity=0.096  Sum_probs=177.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....      +.+.+|+.+++.++||||++++++|.+.+..++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            4678888999999999999999999889999999864432      6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+.+|+|.+++.    ....+++..+..|+.||+.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        94 ~e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQ----QNVHFKEETVKLFICELVMALDYLQNQ----RIIHRDMKPDNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             ECCCTTEEHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CceeccCcHHHeEECCCCCEEEeccceeeec
Confidence            99999999999995    356799999999999999999999999    999999999999999999999999       


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hhHHHHHHHHhhhhhhhhhcccc
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RSLIEWARPLMLQRKFHELLEED  342 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~l~~~~~~~~~~~~~~~~~d~~  342 (376)
                                                  ++.++|||||||++|||++|+ ||.... .......... .         ..
T Consensus       166 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~-~---------~~  235 (384)
T 4fr4_A          166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF-E---------TT  235 (384)
T ss_dssp             CTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH-H---------HC
T ss_pred             cCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH-h---------hc
Confidence                                        466899999999999999999 886322 1111111111 1         11


Q ss_pred             CCCCChHHHHHHHHHHHHccccCCCCCCC-cccc
Q 044707          343 LDFSDMHGIYRVMAAATQCTISKPTSRPC-MSEV  375 (376)
Q Consensus       343 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~ev  375 (376)
                      ....+......+.+|+.+||+.||.+||+ +.+|
T Consensus       236 ~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l  269 (384)
T 4fr4_A          236 VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDV  269 (384)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHH
T ss_pred             ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHH
Confidence            11123344567889999999999999998 5544


No 66 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=3e-39  Score=300.95  Aligned_cols=213  Identities=19%  Similarity=0.209  Sum_probs=180.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+..++..||+|.+.....  +.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   91 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   91 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence            5678888999999999999999998889999999986654  77899999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      .+|+|.+++..  .....+++..+..++.+++.||.|||+.    +|+||||||+|||++.++.+||+|           
T Consensus        92 ~~~~L~~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           92 TYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             TTEEHHHHHHH--CCTTTSCHHHHHHHHHHHHHHHHHHHHH----TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             CCCcHHHHHHh--cccCCccHhHHHHHHHHHHHHHHHHHHC----CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            99999999965  4456799999999999999999999999    999999999999999999999999           


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                             ++.++||||||+++|+|++ |. |+.... ..+...+    ..     ....   ..
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~----~~-----~~~~---~~  233 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL----EK-----DYRM---ER  233 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH----HT-----TCCC---CC
T ss_pred             cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----hc-----cCCC---CC
Confidence                                   5678999999999999999 87 776322 2211111    10     0011   12


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +......+.+++.+||+.||.+|||+.+|+
T Consensus       234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~  263 (288)
T 3kfa_A          234 PEGCPEKVYELMRACWQWNPSDRPSFAEIH  263 (288)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCChhhCcCHHHHH
Confidence            334456788999999999999999999873


No 67 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=2.8e-39  Score=311.49  Aligned_cols=207  Identities=16%  Similarity=0.168  Sum_probs=175.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....      ..+.+|..++..+ +||||+++++++.+.+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            5789999999999999999999998889999999975422      6678899999988 69999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+.+|+|.+++.    ....+++..+..++.||+.||+|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       102 v~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NILl~~~g~ikL~DFG~a~~  173 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQ----KSRRFDEARARFYAAEIISALMFLHDK----GIIYRDLKLDNVLLDHEGHCKLADFGMCKE  173 (353)
T ss_dssp             EEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CCcccCCCHHHEEECCCCCEEEccccceee
Confidence            999999999999994    346799999999999999999999999    999999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|||++|+ ||......  +.....         ......
T Consensus       174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i---------~~~~~~  242 (353)
T 3txo_A          174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DLFEAI---------LNDEVV  242 (353)
T ss_dssp             SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH---------HHCCCC
T ss_pred             cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--HHHHHH---------HcCCCC
Confidence                                       788999999999999999999 88743321  111111         111111


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                       .+......+.+++.+||+.||.+||++
T Consensus       243 -~p~~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          243 -YPTWLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             -CCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence             223344567888999999999999998


No 68 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.7e-39  Score=313.10  Aligned_cols=216  Identities=20%  Similarity=0.196  Sum_probs=174.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEc-----CCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLS-----EYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+.     .++..||||++.....    ..+.+|+.++.+++||||+++++++...+..
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            356788899999999999999953     3567899999975432    5688999999999999999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCC---CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC---CeEE
Q 044707          217 VLVYPHPREGTLDNMLCPSP---HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL---RPMR  290 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~---~~kl  290 (376)
                      ++||||+.+|+|.+++....   .....+++..++.|+.||+.||.|||+.    +|+||||||+|||++.++   .+||
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~~~~kL  225 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN----HFIHRDIAARNCLLTCPGPGRVAKI  225 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChhhEEEecCCCCceEEE
Confidence            99999999999999996421   1225699999999999999999999999    999999999999999555   5999


Q ss_pred             cc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhh
Q 044707          291 IN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQR  333 (376)
Q Consensus       291 ~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~  333 (376)
                      +|                                   ++.++|||||||++|||++ |. ||......  +... ....+
T Consensus       226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~-~i~~~  302 (367)
T 3l9p_A          226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLE-FVTSG  302 (367)
T ss_dssp             CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH-HHHTT
T ss_pred             CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH-HHHcC
Confidence            99                                   6789999999999999998 88 77633221  1111 11111


Q ss_pred             hhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 KFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                              .....+......+.+|+.+||+.||++|||+.+|+
T Consensus       303 --------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil  337 (367)
T 3l9p_A          303 --------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL  337 (367)
T ss_dssp             --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence                    01112334456788999999999999999999874


No 69 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.3e-39  Score=312.98  Aligned_cols=226  Identities=16%  Similarity=0.161  Sum_probs=179.7

Q ss_pred             ccHHHHHHHhcCCCCCceecCCCCEEEEEEEE-----cCCcEEEEEEecCCCCH----HHHHHHHHHHhcC-CCCCceee
Q 044707          137 LSWEVIMEITDKFTTKALMGECKNYVGYLGYL-----SEYHAFVLVKRFTGDSS----SILEAEKKAAWSM-RHKNILGL  206 (376)
Q Consensus       137 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l  206 (376)
                      +...+.....++|...+.||+|+||.||+|.+     ..+++.||||++.....    +.+.+|+.++.++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            33444445578899999999999999999984     34568999999976543    5689999999999 79999999


Q ss_pred             eeeEecCCc-eEEEeecCCCCCHhhhcCCCCCC-----------------------------------------------
Q 044707          207 LGYHQSDSA-SVLVYPHPREGTLDNMLCPSPHN-----------------------------------------------  238 (376)
Q Consensus       207 ~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------------------  238 (376)
                      ++++...+. .++||||+.+|+|.+++......                                               
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK  171 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence            999887554 89999999999999999653110                                               


Q ss_pred             ---------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          239 ---------------ELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       239 ---------------~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                                     ...+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|           
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC----CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                           12289999999999999999999999    999999999999999999999999           


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                              ++.++|||||||++|||++ |+ ||......-  .+......+.     ...   .
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~-----~~~---~  317 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGT-----RMR---A  317 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHHHHHTC-----CCC---C
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHHHHHHcCC-----CCC---C
Confidence                                    6789999999999999998 88 876332110  1111111110     111   2


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +......+.+++..||+.||.+|||+.||+
T Consensus       318 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell  347 (359)
T 3vhe_A          318 PDYTTPEMYQTMLDCWHGEPSQRPTFSELV  347 (359)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            233445788899999999999999999874


No 70 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.5e-38  Score=297.00  Aligned_cols=221  Identities=15%  Similarity=0.165  Sum_probs=174.9

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      ++|...+.||+|+||.||+|.+. +++.||+|++.....     ..+.+|+.++++++||||+++++++...+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcC-CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            46788899999999999999984 458899999875443     678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+.+ +|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|         
T Consensus        81 ~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  152 (288)
T 1ob3_A           81 HLDQ-DLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR----RVLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (288)
T ss_dssp             CCSE-EHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             ecCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence            9985 99999863   346799999999999999999999999    999999999999999999999999         


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhhh---hhhh-----
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQR---KFHE-----  337 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~~---~~~~-----  337 (376)
                                               ++.++|||||||++|||++|+ ||..... .............   .+..     
T Consensus       153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T 1ob3_A          153 PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP  232 (288)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             cccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccc
Confidence                                     678999999999999999999 8763321 1111111111000   0000     


Q ss_pred             hccccCCC--------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          338 LLEEDLDF--------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       338 ~~d~~~~~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..++....        ........+.+++.+||+.||++|||+.|++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  279 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL  279 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            01111100        1122446788899999999999999999874


No 71 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=3.6e-39  Score=299.48  Aligned_cols=211  Identities=19%  Similarity=0.208  Sum_probs=177.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..++..||+|++.....      ..+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            5678888999999999999999998889999999864332      6688999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        88 ~e~~~~~~l~~~l~----~~~~~~~~~~~~~~~qi~~~l~~LH~~----~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           88 LEYAPLGTVYRELQ----KLSKFDEQRTATYITELANALSYCHSK----RVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             ECCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT----TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             EecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC----CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            99999999999994    345799999999999999999999999    999999999999999999999999       


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                              ++.++||||||+++|+|++|+ ||......  .... ....      ....   .+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~-~~~~------~~~~---~~  227 (279)
T 3fdn_A          160 PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYK-RISR------VEFT---FP  227 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH-HHHH------TCCC---CC
T ss_pred             CcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHH-HHHh------CCCC---CC
Confidence                                    567999999999999999999 88633221  1111 1110      0111   22


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.||+
T Consensus       228 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l  256 (279)
T 3fdn_A          228 DFVTEGARDLISRLLKHNPSQRPMLREVL  256 (279)
T ss_dssp             TTSCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             CcCCHHHHHHHHHHhccChhhCCCHHHHh
Confidence            23345778889999999999999999874


No 72 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=8.4e-39  Score=296.63  Aligned_cols=212  Identities=18%  Similarity=0.214  Sum_probs=175.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|....+++.||+|++.....      +.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            4678888999999999999999988789999999964332      6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++++|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           90 LEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSH----GILHRDLTLSNLLLTRNMNIKIADFGLATQL  162 (278)
T ss_dssp             EECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHT----TEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence            999999999999963   346799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++||||||+++|||++|+ |+......-      .     .......... 
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~-----~~~~~~~~~~-  230 (278)
T 3cok_A          163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN------T-----LNKVVLADYE-  230 (278)
T ss_dssp             C----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------CCSSCCC-
T ss_pred             cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH------H-----HHHHhhcccC-
Confidence                                      456899999999999999999 886322110      0     0011111111 


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||++|||+.+|+
T Consensus       231 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l  261 (278)
T 3cok_A          231 MPSFLSIEAKDLIHQLLRRNPADRLSLSSVL  261 (278)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             CccccCHHHHHHHHHHcccCHhhCCCHHHHh
Confidence            2233445788899999999999999999885


No 73 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.8e-38  Score=309.63  Aligned_cols=216  Identities=14%  Similarity=0.110  Sum_probs=178.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....   ..+.+|+.++..++||||+++++++.+.+..++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            4678889999999999999999998889999999976544   5788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC--CCCeEEcc--------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH--DLRPMRIN--------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~--~~~~kl~D--------  292 (376)
                      +.+|+|.+++..   ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.  ++.+||+|        
T Consensus       130 ~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          130 LSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH----SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             CCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             CCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC----CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence            999999999963   345799999999999999999999999    9999999999999974  46799999        


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                              ++.++|||||||++|||++|. ||......  +.+... .....  ..+..   ..
T Consensus       203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~i-~~~~~--~~~~~---~~  274 (387)
T 1kob_A          203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNV-KRCDW--EFDED---AF  274 (387)
T ss_dssp             TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHH-HHCCC--CCCSS---TT
T ss_pred             CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--HHHHHH-HhCCC--CCCcc---cc
Confidence                                    677899999999999999999 88643321  111111 11100  00111   12


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.|++
T Consensus       275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell  303 (387)
T 1kob_A          275 SSVSPEAKDFIKNLLQKEPRKRLTVHDAL  303 (387)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            23445788899999999999999999874


No 74 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=5.3e-39  Score=305.22  Aligned_cols=210  Identities=14%  Similarity=0.100  Sum_probs=176.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|....+++.||+|++....      .+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            467888899999999999999999888999999986532      26778999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        85 ~e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~  156 (318)
T 1fot_A           85 MDYIEGGELFSLLR----KSQRFPNPVAKFYAAEVCLALEYLHSK----DIIYRDLKPENILLDKNGHIKITDFGFAKYV  156 (318)
T ss_dssp             ECCCCSCBHHHHHH----HTSSCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             EeCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChheEEEcCCCCEEEeecCcceec
Confidence            99999999999994    346799999999999999999999999    999999999999999999999999       


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCCh
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDM  348 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~  348 (376)
                                             ++.++|||||||++|||++|+ ||......  ......         +..... .+.
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i---------~~~~~~-~p~  224 (318)
T 1fot_A          157 PDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--KTYEKI---------LNAELR-FPP  224 (318)
T ss_dssp             SSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH---------HHCCCC-CCT
T ss_pred             CCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHH---------HhCCCC-CCC
Confidence                                   578999999999999999999 88643221  111111         111111 223


Q ss_pred             HHHHHHHHHHHHccccCCCCCC-----Ccccc
Q 044707          349 HGIYRVMAAATQCTISKPTSRP-----CMSEV  375 (376)
Q Consensus       349 ~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev  375 (376)
                      ....++.+++.+||+.||++||     ++.+|
T Consensus       225 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i  256 (318)
T 1fot_A          225 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV  256 (318)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHH
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHH
Confidence            3345788888999999999999     67665


No 75 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=7.9e-39  Score=302.67  Aligned_cols=222  Identities=17%  Similarity=0.163  Sum_probs=173.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...++||+|+||.||+|.+.. ++.||+|++.....     ..+.+|+.++++++||||+++++++.+.+..++||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            5678888999999999999999965 58999999975433     56889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+++ +|.+++.   .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus        99 e~~~~-~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A           99 EFMEK-DLKKVLD---ENKTGLQDSQIKIYLYQLLRGVAHCHQH----RILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             ECCSE-EHHHHHH---TCTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             cCCCC-CHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            99985 8888885   3345699999999999999999999999    999999999999999999999999        


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcC-hhhHHHHHHHHhhhhh---hhh----
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQD-YRSLIEWARPLMLQRK---FHE----  337 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~-~~~l~~~~~~~~~~~~---~~~----  337 (376)
                                                ++.++|||||||++|||++|+ ||... .......+........   +..    
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  250 (311)
T 3niz_A          171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL  250 (311)
T ss_dssp             SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred             CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence                                      678899999999999999999 88622 2222222211111000   000    


Q ss_pred             --hccccC---CC-----CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          338 --LLEEDL---DF-----SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       338 --~~d~~~---~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ......   ..     .......++.+|+.+||+.||++|||+.|++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  299 (311)
T 3niz_A          251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM  299 (311)
T ss_dssp             HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred             chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence              000000   00     1122345778899999999999999999874


No 76 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=4.1e-39  Score=300.49  Aligned_cols=218  Identities=17%  Similarity=0.131  Sum_probs=176.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .+.|...++||+|+||.||++....++..||+|++.....    +.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            4568888999999999999999988889999999875432    788999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE---eCCCCeEEcc------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL---RHDLRPMRIN------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl---~~~~~~kl~D------  292 (376)
                      |+++|+|.+++.........+++..+..|+.|++.||.|||+.    +|+||||||+|||+   +.++.+||+|      
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~  176 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ----HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL  176 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC----CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence            9999999999853212346799999999999999999999999    99999999999999   4567899999      


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                               ++.++||||||+++|||++|+ ||.......  ..... .      ...+.....
T Consensus       177 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~-~------~~~~~~~~~  247 (285)
T 3is5_A          177 FKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKA-T------YKEPNYAVE  247 (285)
T ss_dssp             ----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH-H------HCCCCCCC-
T ss_pred             cCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhh-c------cCCcccccc
Confidence                                     567899999999999999999 887433211  11000 0      001111111


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .......+.+++.+||+.||++|||+.|||
T Consensus       248 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l  277 (285)
T 3is5_A          248 CRPLTPQAVDLLKQMLTKDPERRPSAAQVL  277 (285)
T ss_dssp             -CCCCHHHHHHHHHHTCSCTTTSCCHHHHH
T ss_pred             cCcCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            111235778899999999999999999874


No 77 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=5.3e-39  Score=310.42  Aligned_cols=214  Identities=16%  Similarity=0.175  Sum_probs=175.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||++....+++.||||++.....  +.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            4568888999999999999999998889999999976544  78899999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC--eEEcc---------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR--PMRIN---------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~--~kl~D---------  292 (376)
                      .+|+|.+++.    ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.  +||+|         
T Consensus        99 ~~~~L~~~l~----~~~~~~~~~~~~i~~ql~~~L~~LH~~----~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           99 SGGELYERIC----NAGRFSEDEARFFFQQLLSGVSYCHSM----QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             CSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred             CCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence            9999999994    345799999999999999999999999    9999999999999987776  99999         


Q ss_pred             -----------------------C-CCcchhhhHHHHHHHHHhCC-CCCcCh--hhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 -----------------------A-ITKIRCLLFGVLLLRLFCRR-SMPQDY--RSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 -----------------------~-~~~~Dv~S~Gvvl~elltg~-P~~~~~--~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                             + +.++|||||||++|+|++|+ ||....  ...........         ......
T Consensus       171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~---------~~~~~~  241 (361)
T 3uc3_A          171 HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL---------SVKYSI  241 (361)
T ss_dssp             ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH---------TTCCCC
T ss_pred             cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh---------cCCCCC
Confidence                                   2 23489999999999999999 886321  12222221111         111110


Q ss_pred             -CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 -SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 -~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       ........+.+|+.+||+.||++|||+.||+
T Consensus       242 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell  273 (361)
T 3uc3_A          242 PDDIRISPECCHLISRIFVADPATRISIPEIK  273 (361)
T ss_dssp             CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred             CCcCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence             1112345778899999999999999999874


No 78 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=5.7e-39  Score=302.51  Aligned_cols=215  Identities=19%  Similarity=0.219  Sum_probs=176.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEc-----CCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLS-----EYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+.     .++..||+|++.....    +.+.+|+.++++++||||+++++++...+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            466888899999999999999983     3458999999976543    6788999999999999999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCC--------------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCC
Q 044707          217 VLVYPHPREGTLDNMLCPSPH--------------------NELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQ  276 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlk  276 (376)
                      ++||||+.+|+|.+++.....                    ....+++..++.++.|++.||.|||+.    +|+|||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dik  177 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM----KLVHRDLA  177 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT----TEECCCCS
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC----CCcccccc
Confidence            999999999999999964211                    123489999999999999999999999    99999999


Q ss_pred             CCcEEEeCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh
Q 044707          277 LHNIFLRHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY  319 (376)
Q Consensus       277 p~NILl~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~  319 (376)
                      |+|||++.++.+||+|                                   ++.++||||||+++|||++ |. |+....
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999                                   5678999999999999999 88 876332


Q ss_pred             h-hHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          320 R-SLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       320 ~-~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      . .+..    ....+.        ....+......+.+++.+||+.||++|||+.+|+
T Consensus       258 ~~~~~~----~~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~  303 (314)
T 2ivs_A          258 PERLFN----LLKTGH--------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADIS  303 (314)
T ss_dssp             GGGHHH----HHHTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHH----HhhcCC--------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            2 2111    111110        1112334456788999999999999999999874


No 79 
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=3.6e-39  Score=299.32  Aligned_cols=214  Identities=13%  Similarity=0.112  Sum_probs=174.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....     ..+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            5678889999999999999999988889999999875422     6788999999999 899999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC--------------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD--------------  285 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~--------------  285 (376)
                      |||+++|+|.+++.........+++..+..|+.||+.||.|||+.    +|+||||||+|||++.+              
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM----SLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEC----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC----CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            999999999999964211226799999999999999999999999    99999999999999844              


Q ss_pred             -----CCeEEcc------------------------------CCCcchhhhHHHHHHHHHhCCCCCcChhhHHHHHHHHh
Q 044707          286 -----LRPMRIN------------------------------AITKIRCLLFGVLLLRLFCRRSMPQDYRSLIEWARPLM  330 (376)
Q Consensus       286 -----~~~kl~D------------------------------~~~~~Dv~S~Gvvl~elltg~P~~~~~~~l~~~~~~~~  330 (376)
                           ..+||+|                              ++.++|||||||+++||++|.|+.......     ...
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-----~~~  240 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW-----HEI  240 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH-----HHH
T ss_pred             ccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH-----HHH
Confidence                 4789998                              335899999999999999999443222211     111


Q ss_pred             hhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          331 LQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       331 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..+        .....+......+.+++.+||+.||++|||+.+|+
T Consensus       241 ~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  278 (289)
T 1x8b_A          241 RQG--------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALV  278 (289)
T ss_dssp             HTT--------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HcC--------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHh
Confidence            111        11112333446788899999999999999999874


No 80 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.3e-38  Score=315.97  Aligned_cols=216  Identities=14%  Similarity=0.070  Sum_probs=177.1

Q ss_pred             HhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          145 ITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       145 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      ..++|...+.||+|+||.||+|.+..+++.||+|++.....     +.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            35779999999999999999999998889999999976542     6688999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEe---CCCCeEEcc----
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLR---HDLRPMRIN----  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~---~~~~~kl~D----  292 (376)
                      |||+.+|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++   .++.+||+|    
T Consensus        89 ~E~~~gg~L~~~i~----~~~~~~e~~~~~i~~qil~aL~~lH~~----givHrDlKp~NIll~~~~~~~~vkL~DFG~a  160 (444)
T 3soa_A           89 FDLVTGGELFEDIV----AREYYSEADASHCIQQILEAVLHCHQM----GVVHRNLKPENLLLASKLKGAAVKLADFGLA  160 (444)
T ss_dssp             ECCCBCCBHHHHHH----HCSCCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred             EEeCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence            99999999999994    346799999999999999999999999    999999999999998   457899999    


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhcccc
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEED  342 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~  342 (376)
                                                   ++.++|||||||++|+|++|. ||......  ... ..+..+.. ....+ 
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~-~~i~~~~~-~~~~~-  235 (444)
T 3soa_A          161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLY-QQIKAGAY-DFPSP-  235 (444)
T ss_dssp             BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHH-HHHHHTCC-CCCTT-
T ss_pred             EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHH-HHHHhCCC-CCCcc-
Confidence                                         678999999999999999999 88643321  111 11111111 00011 


Q ss_pred             CCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          343 LDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       343 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ........+.+++.+||+.||++|||+.|+|
T Consensus       236 ---~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L  266 (444)
T 3soa_A          236 ---EWDTVTPEAKDLINKMLTINPSKRITAAEAL  266 (444)
T ss_dssp             ---TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             ---ccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence               1223345788899999999999999999874


No 81 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=6.1e-39  Score=308.54  Aligned_cols=212  Identities=16%  Similarity=0.152  Sum_probs=174.6

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      +.|...+.||+|+||.||+|....+++.||||++.....      +.+.+|+.++++++||||+++++++...+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            447888999999999999999988889999999965432      56889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+. |+|.+++.   .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus       134 e~~~-g~l~~~l~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          134 EYCL-GSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLHSH----NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             ECCS-EEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             ecCC-CCHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            9997 68888874   2346799999999999999999999999    999999999999999999999999        


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                              ++.++|||||||++|||++|+ |+......  ..+..... +     ..+..  ..
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~~~~~~~-~-----~~~~~--~~  275 (348)
T 1u5q_A          206 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQ-N-----ESPAL--QS  275 (348)
T ss_dssp             SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHH-S-----CCCCC--CC
T ss_pred             CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHh-c-----CCCCC--CC
Confidence                                    466899999999999999999 87633211  11111111 1     01111  12


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.+|+
T Consensus       276 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll  304 (348)
T 1u5q_A          276 GHWSEYFRNFVDSCLQKIPQDRPTSEVLL  304 (348)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             CCCCHHHHHHHHHHcccChhhCcCHHHHh
Confidence            23345678889999999999999999875


No 82 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.1e-38  Score=298.83  Aligned_cols=215  Identities=18%  Similarity=0.232  Sum_probs=171.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhc--CCCCCceeeeeeEec----CCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWS--MRHKNILGLLGYHQS----DSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~----~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+.  ++.||||++.......+..|.+++..  ++||||+++++++..    ....++|
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv   84 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI   84 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEEC--CEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence            567889999999999999999984  68999999987766777777777766  789999999998654    3457999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCCCeeecCCCCCcEEEeCCCCeEEc
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMH--------QECPRGPIAHGELQLHNIFLRHDLRPMRI  291 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH--------~~~~~~~iiH~Dlkp~NILl~~~~~~kl~  291 (376)
                      |||+++|+|.+++..     ..+++..++.|+.|++.||.|||        +.    +|+||||||+|||++.++.+||+
T Consensus        85 ~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~----~ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           85 THYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP----AIAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             ECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC----EEECSCCCGGGEEECTTSCEEEC
T ss_pred             hhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC----CeecCCCChHhEEEcCCCCEEEe
Confidence            999999999999953     46999999999999999999999        77    99999999999999999999999


Q ss_pred             cC-------------------------------------------CCcchhhhHHHHHHHHHhC----------C-CCCc
Q 044707          292 NA-------------------------------------------ITKIRCLLFGVLLLRLFCR----------R-SMPQ  317 (376)
Q Consensus       292 D~-------------------------------------------~~~~Dv~S~Gvvl~elltg----------~-P~~~  317 (376)
                      |+                                           +.++|||||||++|||++|          + ||..
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence            90                                           1479999999999999999          7 7652


Q ss_pred             C---hhhHHHHHHHHhhhhhhhhhccccCCC--CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          318 D---YRSLIEWARPLMLQRKFHELLEEDLDF--SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       318 ~---~~~l~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .   ........ ....    .....+....  ........+.+++.+||+.||++|||+.+|+
T Consensus       236 ~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~  294 (301)
T 3q4u_A          236 VVPNDPSFEDMR-KVVC----VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK  294 (301)
T ss_dssp             TSCSSCCHHHHH-HHHT----TSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             cCCCCcchhhhh-HHHh----ccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHH
Confidence            1   11111111 1111    0111111111  2345678899999999999999999999874


No 83 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.3e-38  Score=298.35  Aligned_cols=223  Identities=15%  Similarity=0.159  Sum_probs=178.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....     +.+.+|+.++++++||||+++++++...+..++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            3578888999999999999999998889999999865443     56789999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+++++|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus        82 e~~~~~~l~~~~~----~~~~~~~~~~~~i~~~l~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A           82 EYCDHTVLHELDR----YQRGVPEHLVKSITWQTLQAVNFCHKH----NCIHRDVKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             ECCSEEHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EeCCCchHHHHHh----hhcCCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence            9999999999984    346799999999999999999999999    999999999999999999999999        


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhh-----------hh
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLML-----------QR  333 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~-----------~~  333 (376)
                                                ++.++||||||+++|+|++|+ ||..... ...........           ..
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (311)
T 4agu_A          154 GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN  233 (311)
T ss_dssp             ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred             CcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence                                      578999999999999999999 8763321 11111111110           00


Q ss_pred             hh-hhhccccCCC------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 KF-HELLEEDLDF------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ~~-~~~~d~~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .. .....+....      ........+.+++.+||+.||++|||+.||+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  283 (311)
T 4agu_A          234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL  283 (311)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHH
T ss_pred             cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHh
Confidence            00 0000000000      0123445688899999999999999999874


No 84 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=1.5e-38  Score=296.34  Aligned_cols=214  Identities=20%  Similarity=0.246  Sum_probs=175.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----------HHHHHHHHHHhcCCCCCceeeeeeEecCCc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----------SILEAEKKAAWSMRHKNILGLLGYHQSDSA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  215 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....          +.+.+|+.++.+++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            4668888999999999999999988889999999865332          57889999999999999999999987655 


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC--eeecCCCCCcEEEeCCCC-----e
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP--IAHGELQLHNIFLRHDLR-----P  288 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~--iiH~Dlkp~NILl~~~~~-----~  288 (376)
                       ++||||+++|+|.+++.   .....+++..+..++.|++.||.|||+.    +  |+||||||+|||++.++.     +
T Consensus        97 -~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~~l~~~l~~lH~~----~~~ivH~dikp~Nil~~~~~~~~~~~~  168 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ----NPPIVHRDLRSPNIFLQSLDENAPVCA  168 (287)
T ss_dssp             -EEEEECCTTCBHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHTS----SSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred             -eEEEEecCCCCHHHHHh---cccCCccHHHHHHHHHHHHHHHHHHHhC----CCCeecCCCCcceEEEeccCCCCceeE
Confidence             79999999999998886   3446799999999999999999999999    8  999999999999988776     8


Q ss_pred             EEcc--------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhh
Q 044707          289 MRIN--------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKF  335 (376)
Q Consensus       289 kl~D--------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~  335 (376)
                      ||+|                                ++.++|||||||++|||++|+ ||......-..+.......   
T Consensus       169 kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---  245 (287)
T 4f0f_A          169 KVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE---  245 (287)
T ss_dssp             EECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHS---
T ss_pred             EeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhcc---
Confidence            9999                                457899999999999999999 8864332222111111111   


Q ss_pred             hhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          336 HELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       336 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ...+.   .+......+.+++.+||+.||++|||+.+|+
T Consensus       246 --~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  281 (287)
T 4f0f_A          246 --GLRPT---IPEDCPPRLRNVIELCWSGDPKKRPHFSYIV  281 (287)
T ss_dssp             --CCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --CCCCC---CCcccCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence              11111   2334456788999999999999999999874


No 85 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=5.2e-39  Score=308.72  Aligned_cols=211  Identities=16%  Similarity=0.164  Sum_probs=176.9

Q ss_pred             HhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcC-CCCCceeeeeeEecCCceE
Q 044707          145 ITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSM-RHKNILGLLGYHQSDSASV  217 (376)
Q Consensus       145 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~  217 (376)
                      ..++|...+.||+|+||.||+|.+..+++.||||++....      ...+..|..++..+ +||||+++++++.+.+..+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            4678999999999999999999999888999999997532      26678899999876 8999999999999999999


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----  292 (376)
                      +||||+++|+|.+++.    ....+++..+..++.||+.||+|||+.    +|+||||||+|||++.++.+||+|     
T Consensus        95 lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~vkL~DFG~a~  166 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQ----SCHKFDLSRATFYAAEIILGLQFLHSK----GIVYRDLKLDNILLDKDGHIKIADFGMCK  166 (345)
T ss_dssp             EEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence            9999999999999994    345799999999999999999999999    999999999999999999999999     


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccC
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDL  343 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~  343 (376)
                                                  ++.++|||||||++|||++|+ ||......  +... .+..+      ... 
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~-~i~~~------~~~-  236 (345)
T 1xjd_A          167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFH-SIRMD------NPF-  236 (345)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-HHHHC------CCC-
T ss_pred             hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHH-HHHhC------CCC-
Confidence                                        678999999999999999999 88643321  1111 11111      111 


Q ss_pred             CCCChHHHHHHHHHHHHccccCCCCCCCcc-cc
Q 044707          344 DFSDMHGIYRVMAAATQCTISKPTSRPCMS-EV  375 (376)
Q Consensus       344 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-ev  375 (376)
                        .+......+.+++.+||+.||++||++. +|
T Consensus       237 --~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i  267 (345)
T 1xjd_A          237 --YPRWLEKEAKDLLVKLFVREPEKRLGVRGDI  267 (345)
T ss_dssp             --CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred             --CCcccCHHHHHHHHHHhcCCHhHcCCChHHH
Confidence              2223345778888999999999999997 65


No 86 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.9e-39  Score=305.60  Aligned_cols=217  Identities=18%  Similarity=0.200  Sum_probs=174.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEc-----CCcEEEEEEecCCCCH----HHHHHHHHHHhcC-CCCCceeeeeeEecCCc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLS-----EYHAFVLVKRFTGDSS----SILEAEKKAAWSM-RHKNILGLLGYHQSDSA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~  215 (376)
                      .++|...+.||+|+||.||+|.+.     .++..||||++.....    +.+.+|+.++.++ +||||+++++++...+.
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            467888899999999999999972     3567899999975432    7789999999999 89999999999999999


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCC-------------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCC
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHN-------------------ELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQ  276 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlk  276 (376)
                      .++||||+++|+|.+++......                   ...+++..++.|+.||+.||.|||+.    +|+|||||
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dik  199 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK----SCVHRDLA  199 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT----TEEETTCS
T ss_pred             cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCC
Confidence            99999999999999999652110                   13489999999999999999999999    99999999


Q ss_pred             CCcEEEeCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh
Q 044707          277 LHNIFLRHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY  319 (376)
Q Consensus       277 p~NILl~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~  319 (376)
                      |+|||++.++.+||+|                                   ++.++||||||+++|||+| |. ||....
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999999                                   6788999999999999998 88 886332


Q ss_pred             hhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          320 RSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       320 ~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..-  .+......+     ....   .+......+.+|+.+||+.||.+|||+.+|+
T Consensus       280 ~~~--~~~~~~~~~-----~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  326 (344)
T 1rjb_A          280 VDA--NFYKLIQNG-----FKMD---QPFYATEEIYIIMQSCWAFDSRKRPSFPNLT  326 (344)
T ss_dssp             CSH--HHHHHHHTT-----CCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cHH--HHHHHHhcC-----CCCC---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            110  011111111     1111   2333456788899999999999999999874


No 87 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=2.9e-39  Score=301.15  Aligned_cols=212  Identities=16%  Similarity=0.177  Sum_probs=172.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCc-------EEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYH-------AFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~-------~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  215 (376)
                      .++|...+.||+|+||.||+|.+..++       ..||+|++.....   +.+.+|+.++++++||||+++++++...+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            356788899999999999999987654       5799999875443   788999999999999999999999999999


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC--------
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR--------  287 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~--------  287 (376)
                      .++||||+.+|+|.+++..   ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.        
T Consensus        87 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~~~~  159 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN----TLIHGNVCAKNILLIREEDRKTGNPPF  159 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred             CEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHhhC----CeECCCcCcceEEEecCCcccccccce
Confidence            9999999999999999963   334599999999999999999999999    9999999999999998887        


Q ss_pred             eEEcc------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhh
Q 044707          288 PMRIN------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFH  336 (376)
Q Consensus       288 ~kl~D------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~  336 (376)
                      +||+|                              ++.++||||||+++|||++|. |+........ .. .....    
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~-~~~~~----  233 (289)
T 4fvq_A          160 IKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KL-QFYED----  233 (289)
T ss_dssp             EEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HH-HHHHT----
T ss_pred             eeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HH-HHhhc----
Confidence            89999                              677899999999999999976 5442211110 00 00000    


Q ss_pred             hhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ...   .+......+.+++.+||+.||++|||+.+|+
T Consensus       234 ---~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  267 (289)
T 4fvq_A          234 ---RHQ---LPAPKAAELANLINNCMDYEPDHRPSFRAII  267 (289)
T ss_dssp             ---TCC---CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             ---cCC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence               011   1111234677888999999999999999874


No 88 
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=3.3e-38  Score=299.79  Aligned_cols=220  Identities=14%  Similarity=0.151  Sum_probs=177.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCC-CCCceeeeeeEec--CCceEEEeec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMR-HKNILGLLGYHQS--DSASVLVYPH  222 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~--~~~~~lv~e~  222 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....+.+.+|+.++.+++ ||||+++++++.+  ....++||||
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~  114 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  114 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence            367888899999999999999998888999999999877789999999999997 9999999999987  6678999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC-CeEEcc---------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL-RPMRIN---------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~-~~kl~D---------  292 (376)
                      +.+++|.+++.       .+++..+..++.|++.||.|||+.    +|+||||||+|||++.++ .+||+|         
T Consensus       115 ~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          115 VNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM----GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             CCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             cCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            99999999984       389999999999999999999999    999999999999999776 899999         


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHH--HHHHhhhhhhhhhcccc---
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEW--ARPLMLQRKFHELLEED---  342 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~--~~~~~~~~~~~~~~d~~---  342 (376)
                                              ++.++|||||||++|||++|+ ||..........  .............++..   
T Consensus       184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  263 (330)
T 3nsz_A          184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  263 (330)
T ss_dssp             TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence                                    677999999999999999999 886332211111  11111111111111000   


Q ss_pred             --------------------CCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          343 --------------------LDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       343 --------------------~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                                          ... ........+.+|+.+||+.||++|||+.|+|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l  318 (330)
T 3nsz_A          264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM  318 (330)
T ss_dssp             CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence                                000 1122456788999999999999999999874


No 89 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2.3e-38  Score=294.32  Aligned_cols=215  Identities=16%  Similarity=0.117  Sum_probs=177.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....     +.+.+|+.++++++||||+++++++...+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            5778899999999999999999998889999999865432     66789999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC---eEEcc-----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR---PMRIN-----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~---~kl~D-----  292 (376)
                      ||+.+|+|.+.+.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.   +||+|     
T Consensus        85 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A           85 DLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             CCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             ecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            9999999999884    346799999999999999999999999    9999999999999986655   99999     


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++||||||+++|+|++|+ ||.......  .. .....+.. ....+   
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~-~~~~~~~~-~~~~~---  229 (284)
T 3kk8_A          157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LY-AQIKAGAY-DYPSP---  229 (284)
T ss_dssp             ECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-HHHHHTCC-CCCTT---
T ss_pred             EcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--HH-HHHHhccc-cCCch---
Confidence                                       577899999999999999999 886433211  11 11111110 00001   


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       ........+.+++.+||+.||++|||+.|++
T Consensus       230 -~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l  260 (284)
T 3kk8_A          230 -EWDTVTPEAKSLIDSMLTVNPKKRITADQAL  260 (284)
T ss_dssp             -TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             -hhcccCHHHHHHHHHHcccChhhCCCHHHHh
Confidence             1123345788899999999999999999875


No 90 
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=3.5e-39  Score=299.14  Aligned_cols=216  Identities=15%  Similarity=0.126  Sum_probs=176.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEe--cCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQ--SDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+.....     +.+.+|+.++++++||||+++++++.  ..+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            4678888999999999999999988889999999975432     67889999999999999999999875  3667899


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC-----eeecCCCCCcEEEeCCCCeEEcc-
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP-----IAHGELQLHNIFLRHDLRPMRIN-  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~-----iiH~Dlkp~NILl~~~~~~kl~D-  292 (376)
                      ||||+++|+|.+++.........+++..++.++.|++.||.|||+.    +     |+||||||+|||++.++.+||+| 
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~----~~~~~~ivH~dl~p~NIl~~~~~~~kl~df  160 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR----SDGGHTVLHRDLKPANVFLDGKQNVKLGDF  160 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH----C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc----cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence            9999999999999964222345699999999999999999999999    7     99999999999999999999999 


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhc
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~  339 (376)
                                                      ++.++||||||+++|+|++|+ |+......  .. ...+..+..    
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~-~~~i~~~~~----  233 (279)
T 2w5a_A          161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--EL-AGKIREGKF----  233 (279)
T ss_dssp             CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH-HHHHHHTCC----
T ss_pred             chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HH-HHHHhhccc----
Confidence                                            577899999999999999999 88643221  11 111111111    


Q ss_pred             cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                          ...+......+.+++.+||+.||++|||+.||+
T Consensus       234 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll  266 (279)
T 2w5a_A          234 ----RRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL  266 (279)
T ss_dssp             ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ----ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence                112233446788899999999999999999874


No 91 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=6.1e-39  Score=304.79  Aligned_cols=223  Identities=19%  Similarity=0.227  Sum_probs=172.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCc----eEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSA----SVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----~~lv  219 (376)
                      .++|...++||+|+||.||+|.+.  ++.||||++.....  ..+..|+.++.+++||||+++++++.....    .++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            467888899999999999999986  68999999976554  556678999999999999999999987543    6999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-------CCCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQEC-------PRGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------~~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                      |||+++|+|.+++..     ..+++..+..|+.|++.||.|||+..       .+ +|+||||||+|||++.++.+||+|
T Consensus       101 ~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~-~ivH~Dlkp~Nill~~~~~~kL~D  174 (322)
T 3soc_A          101 TAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP-AISHRDIKSKNVLLKNNLTACIAD  174 (322)
T ss_dssp             EECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEEC-EEECSCCSGGGEEECTTCCEEECC
T ss_pred             EecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCC-CEEeCCCChHhEEECCCCeEEEcc
Confidence            999999999999953     35999999999999999999999861       22 699999999999999999999999


Q ss_pred             ----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh----hHHHHHH
Q 044707          293 ----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR----SLIEWAR  327 (376)
Q Consensus       293 ----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~----~l~~~~~  327 (376)
                                                              ++.++|||||||++|||+||+ ||.....    .+.....
T Consensus       175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~  254 (322)
T 3soc_A          175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG  254 (322)
T ss_dssp             CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred             CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence                                                    123569999999999999999 8762211    0000000


Q ss_pred             -----HHhhhhhhhhhccccCCC--CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          328 -----PLMLQRKFHELLEEDLDF--SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       328 -----~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                           ..+..........+.+..  ........+.+|+.+||+.||++|||+.+|+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell  310 (322)
T 3soc_A          255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG  310 (322)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHH
Confidence                 000000011111122221  2345667799999999999999999999874


No 92 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=6.5e-39  Score=305.34  Aligned_cols=216  Identities=12%  Similarity=0.048  Sum_probs=175.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|....+++.||||++..... ..+.+|+.+++.+ +|+||+++++++...+..++||||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            4678888999999999999999988889999999875543 6688999999999 8999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC-----eEEcc------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR-----PMRIN------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~-----~kl~D------  292 (376)
                       +|+|.+++..   ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.     +||+|      
T Consensus        88 -~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~----~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           88 -GPSLEDLFDL---CDRTFSLKTVLMIAIQLISRMEYVHSK----NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             -CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             -CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC----CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence             8999999963   246799999999999999999999999    9999999999999998887     99999      


Q ss_pred             ----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hhHHHHHHHHhhhhhhh
Q 044707          293 ----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RSLIEWARPLMLQRKFH  336 (376)
Q Consensus       293 ----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~l~~~~~~~~~~~~~~  336 (376)
                                                        ++.++|||||||++|||++|+ ||.... ..+.+...... .....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~-~~~~~  238 (330)
T 2izr_A          160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG-DTKRA  238 (330)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHH-HHHHH
T ss_pred             eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHH-hhhcc
Confidence                                              466899999999999999999 887322 22222221111 11110


Q ss_pred             hhccccCCCCChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          337 ELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       337 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                      ...+.    .....+ .+.+++..||+.||.+||++.+|
T Consensus       239 ~~~~~----~~~~~p-~~~~li~~~l~~~p~~RP~~~~l  272 (330)
T 2izr_A          239 TPIEV----LCENFP-EMATYLRYVRRLDFFEKPDYDYL  272 (330)
T ss_dssp             SCHHH----HTTTCH-HHHHHHHHHHHCCTTCCCCHHHH
T ss_pred             CCHHH----HhccCh-HHHHHHHHHHhCCCCCCCCHHHH
Confidence            00000    011123 78889999999999999999876


No 93 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=8.8e-39  Score=307.72  Aligned_cols=210  Identities=12%  Similarity=0.032  Sum_probs=177.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....      +.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            4678888999999999999999998889999999865432      6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++..    ...+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus       120 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~  191 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL----DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC----CcccccCccceEEECCCCCEEEcccccceec
Confidence            999999999999953    45799999999999999999999999    999999999999999999999999       


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCCh
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDM  348 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~  348 (376)
                                             ++.++|||||||++|||++|+ ||......  +... .+..+        ... .+.
T Consensus       192 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~-~i~~~--------~~~-~p~  259 (350)
T 1rdq_E          192 KGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QIYE-KIVSG--------KVR-FPS  259 (350)
T ss_dssp             SSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-HHHHC--------CCC-CCT
T ss_pred             cCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--HHHH-HHHcC--------CCC-CCC
Confidence                                   678999999999999999999 88643321  1111 11111        111 233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCC-----cccc
Q 044707          349 HGIYRVMAAATQCTISKPTSRPC-----MSEV  375 (376)
Q Consensus       349 ~~~~~l~~l~~~Cl~~dP~~RPs-----~~ev  375 (376)
                      .....+.+++.+||+.||.+||+     +.+|
T Consensus       260 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei  291 (350)
T 1rdq_E          260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI  291 (350)
T ss_dssp             TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHH
T ss_pred             CCCHHHHHHHHHHhhcCHHhccCCccCCHHHH
Confidence            34567888999999999999998     6654


No 94 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.7e-38  Score=293.25  Aligned_cols=210  Identities=21%  Similarity=0.249  Sum_probs=169.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+.  +..||||++.....       +.+.+|+.+++.++||||+++++++...+..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            356888899999999999999986  68899999875432       678899999999999999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC---eeecCCCCCcEEEeC--------CCC
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP---IAHGELQLHNIFLRH--------DLR  287 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~---iiH~Dlkp~NILl~~--------~~~  287 (376)
                      ||||+++++|.+++..     ..+++..++.++.|++.||.|||+.    +   |+||||||+|||++.        ++.
T Consensus        84 v~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~----~~~~i~H~dikp~Nil~~~~~~~~~~~~~~  154 (271)
T 3dtc_A           84 VMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDE----AIVPIIHRDLKSSNILILQKVENGDLSNKI  154 (271)
T ss_dssp             EEECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHS----SSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred             EEEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC----CCCceeecCCchHHEEEecccccccccCcc
Confidence            9999999999999953     4799999999999999999999999    7   999999999999986        677


Q ss_pred             eEEcc-------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhh
Q 044707          288 PMRIN-------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKF  335 (376)
Q Consensus       288 ~kl~D-------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~  335 (376)
                      +||+|                               ++.++||||||+++++|++|+ ||.........+  .... .  
T Consensus       155 ~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~--~~~~-~--  229 (271)
T 3dtc_A          155 LKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY--GVAM-N--  229 (271)
T ss_dssp             EEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH--HHHT-S--
T ss_pred             eEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--hhhc-C--
Confidence            99999                               677899999999999999999 886433221110  1100 0  


Q ss_pred             hhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          336 HELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       336 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ....   ..+......+.+++.+||+.||.+|||+.||+
T Consensus       230 --~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l  265 (271)
T 3dtc_A          230 --KLAL---PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL  265 (271)
T ss_dssp             --CCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --CCCC---CCCcccCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence              0011   12334456788999999999999999999874


No 95 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=2.2e-38  Score=293.02  Aligned_cols=214  Identities=14%  Similarity=0.136  Sum_probs=177.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....    +.+.+|+.+++.++||||+++++++...+..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            4678888999999999999999988889999999864332    778899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+++|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+||+++.++.+||+|         
T Consensus        86 ~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           86 YCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI----GITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             CCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             ecCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC----CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence            999999999994    346799999999999999999999999    999999999999999999999998         


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 .+.++||||||+++|||++|+ ||.........+.  .+....      ... 
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~------~~~-  228 (276)
T 2yex_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DWKEKK------TYL-  228 (276)
T ss_dssp             TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH--HHHTTC------TTS-
T ss_pred             CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH--Hhhhcc------ccc-
Confidence                                       245799999999999999999 8873322111110  111100      000 


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .........+.+++.+||+.||++|||+.||+
T Consensus       229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il  260 (276)
T 2yex_A          229 NPWKKIDSAPLALLHKILVENPSARITIPDIK  260 (276)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             CchhhcCHHHHHHHHHHCCCCchhCCCHHHHh
Confidence            01223345778899999999999999999875


No 96 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=7.6e-39  Score=303.47  Aligned_cols=214  Identities=19%  Similarity=0.267  Sum_probs=165.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcE---EEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCce-
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHA---FVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSAS-  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~---~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-  216 (376)
                      .++|...+.||+|+||.||+|.+..++.   .||||++.....     +.+.+|+.++++++||||+++++++...... 
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            5678889999999999999999876544   799999976432     7788999999999999999999999877665 


Q ss_pred             -----EEEeecCCCCCHhhhcCCCC--CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeE
Q 044707          217 -----VLVYPHPREGTLDNMLCPSP--HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPM  289 (376)
Q Consensus       217 -----~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~k  289 (376)
                           ++||||+.+|+|.+++....  .....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+|
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~----~ivH~Dikp~NIli~~~~~~k  177 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR----NFIHRDLAARNCMLAEDMTVC  177 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTSCEE
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC----CcccCCCCcceEEEcCCCCEE
Confidence                 99999999999999985321  1223699999999999999999999999    999999999999999999999


Q ss_pred             Ecc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHHHHHHHHhh
Q 044707          290 RIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLIEWARPLML  331 (376)
Q Consensus       290 l~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~~~~~~~~~  331 (376)
                      |+|                                   ++.++|||||||++|||++ |. |+.... ..+...      
T Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~------  251 (323)
T 3qup_A          178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY------  251 (323)
T ss_dssp             ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH------
T ss_pred             EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHH------
Confidence            999                                   6789999999999999999 78 776322 111111      


Q ss_pred             hhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          332 QRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       332 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                            +........+......+.+++.+||+.||++|||+.+|
T Consensus       252 ------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  289 (323)
T 3qup_A          252 ------LIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCL  289 (323)
T ss_dssp             ------HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             ------HhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHH
Confidence                  11111111234445678899999999999999998776


No 97 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.5e-38  Score=294.77  Aligned_cols=215  Identities=16%  Similarity=0.137  Sum_probs=177.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC---HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS---SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      .++|...+.||+|+||.||+|.+..++..||+|++....   .+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            466888899999999999999999888899999987533   27889999999999999999999999999999999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE---eCCCCeEEcc-------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL---RHDLRPMRIN-------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl---~~~~~~kl~D-------  292 (376)
                      +++++|.+++.    ....+++..+..|+.|++.||.|||+.    +|+||||||+|||+   +.++.+||+|       
T Consensus        88 ~~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~  159 (277)
T 3f3z_A           88 CTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKL----NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF  159 (277)
T ss_dssp             CCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             cCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence            99999999984    346799999999999999999999999    99999999999999   7889999999       


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                              ++.++||||||+++|||++|+ ||......  +.. .....+... ....    ..
T Consensus       160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~-~~~~~~~~~-~~~~----~~  231 (277)
T 3f3z_A          160 KPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVM-LKIREGTFT-FPEK----DW  231 (277)
T ss_dssp             CTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH-HHHHHCCCC-CCHH----HH
T ss_pred             cCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHH-HHHHhCCCC-CCch----hh
Confidence                                    467899999999999999999 88633221  111 111111000 0000    00


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.+++
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l  260 (277)
T 3f3z_A          232 LNVSPQAESLIRRLLTKSPKQRITSLQAL  260 (277)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             hcCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            12345788899999999999999999875


No 98 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.5e-38  Score=292.77  Aligned_cols=211  Identities=18%  Similarity=0.240  Sum_probs=175.6

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCC
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPR  224 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  224 (376)
                      ++|...+.||+|+||.||+|.+..+ ..||+|++.....  +.+.+|+.++..++||||+++++++...+..++||||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTT-EEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCC-CeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            4677788999999999999999754 8899999986543  788999999999999999999999999999999999999


Q ss_pred             CCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------------
Q 044707          225 EGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------------  292 (376)
Q Consensus       225 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------------  292 (376)
                      +|+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+||+++.++.+||+|            
T Consensus        87 ~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~  159 (267)
T 3t9t_A           87 HGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA----CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  159 (267)
T ss_dssp             TCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred             CCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence            9999999963   345789999999999999999999999    999999999999999999999999            


Q ss_pred             ----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCCh
Q 044707          293 ----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDM  348 (376)
Q Consensus       293 ----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~  348 (376)
                                            ++.++||||||+++|||++ |+ |+......  .... ....+     ....   .+.
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~-~i~~~-----~~~~---~~~  228 (267)
T 3t9t_A          160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVE-DISTG-----FRLY---KPR  228 (267)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH-HHHTT-----CCCC---CCT
T ss_pred             cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHH-HHhcC-----CcCC---CCc
Confidence                                  5678999999999999999 78 77633211  1111 11111     0111   122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          349 HGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       349 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....+.+++.+||+.||++|||+.+++
T Consensus       229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll  256 (267)
T 3t9t_A          229 LASTHVYQIMNHCWRERPEDRPAFSRLL  256 (267)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCcHHHHHHHHHHccCChhhCcCHHHHH
Confidence            3345788899999999999999999874


No 99 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=4.9e-39  Score=301.53  Aligned_cols=223  Identities=19%  Similarity=0.215  Sum_probs=172.2

Q ss_pred             cCCCCCceecCCCCEEEEEEEE----cCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecC--Cce
Q 044707          147 DKFTTKALMGECKNYVGYLGYL----SEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSD--SAS  216 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~----~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~  216 (376)
                      +.|...+.||+|+||.||+|.+    ..+++.||+|++.....    ..+.+|+.++..++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4477788999999999999994    45679999999975543    7789999999999999999999999876  668


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ++||||+++|+|.+++..   ....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||+|    
T Consensus       101 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~  173 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR----QYVHRDLAARNVLVESEHQVKIGDFGLT  173 (302)
T ss_dssp             EEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcC----CcccCCCchheEEEcCCCCEEECccccc
Confidence            999999999999999952   345699999999999999999999999    999999999999999999999999    


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHh---hhhhhh
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLM---LQRKFH  336 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~---~~~~~~  336 (376)
                                                      ++.++||||||+++|||++|. |+...............   ....+.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  253 (302)
T 4e5w_A          174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV  253 (302)
T ss_dssp             EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred             ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence                                            445799999999999999999 65321111111000000   000111


Q ss_pred             hhccccCC-CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELLEEDLD-FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~d~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..+..... ..+......+.+++.+||+.||.+|||+.+|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  294 (302)
T 4e5w_A          254 NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI  294 (302)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence            11111111 13444557888999999999999999999874


No 100
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=8.2e-39  Score=316.53  Aligned_cols=226  Identities=12%  Similarity=0.011  Sum_probs=182.7

Q ss_pred             ccHHHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeE
Q 044707          137 LSWEVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYH  210 (376)
Q Consensus       137 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~  210 (376)
                      +.+.++...+++|...++||+|+||.||+|.+..+++.||||++.....      ..+.+|+.++..++||||++++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            3455556667899999999999999999999999889999999975322      3478999999999999999999999


Q ss_pred             ecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEE
Q 044707          211 QSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMR  290 (376)
Q Consensus       211 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl  290 (376)
                      .+.+..+|||||+++|+|.+++..   ....+++..+..++.||+.||.|||+.    +||||||||+|||++.++.+||
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~----giiHrDLKp~NILl~~~g~vkL  216 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVHQL----HYVHRDIKPDNILMDMNGHIRL  216 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEE
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHHhC----CeEecccCHHHeeEcCCCCEEE
Confidence            999999999999999999999963   346799999999999999999999999    9999999999999999999999


Q ss_pred             cc---------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHh
Q 044707          291 IN---------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLM  330 (376)
Q Consensus       291 ~D---------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~  330 (376)
                      +|                                       ++.++|||||||++|||++|+ ||......  +......
T Consensus       217 ~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--~~~~~i~  294 (437)
T 4aw2_A          217 ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIM  294 (437)
T ss_dssp             CCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHH
T ss_pred             cchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--HHHHhhh
Confidence            99                                       356899999999999999999 88743221  1111111


Q ss_pred             hhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCC--CCCccccC
Q 044707          331 LQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTS--RPCMSEVL  376 (376)
Q Consensus       331 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl  376 (376)
                      ... .    ....+.........+.+|+.+||..+|++  ||++.||+
T Consensus       295 ~~~-~----~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil  337 (437)
T 4aw2_A          295 NHK-E----RFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFK  337 (437)
T ss_dssp             THH-H----HCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHH
T ss_pred             hcc-c----cccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHh
Confidence            110 0    01111111223457788889999888887  99998863


No 101
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=6.1e-39  Score=319.03  Aligned_cols=212  Identities=18%  Similarity=0.211  Sum_probs=175.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...++||+|+||.||+|.+..+ ..||||++.....  +.+.+|+.++++++||||+++++++.. +..++||||+
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~  260 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  260 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECCC-ceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence            45677888999999999999999865 7799999986543  789999999999999999999999876 6789999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      ++|+|.+++..  .....+++..+..|+.|++.||+|||+.    +|+||||||+|||++.++.+||+|           
T Consensus       261 ~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  334 (452)
T 1fmk_A          261 SKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERM----NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  334 (452)
T ss_dssp             TTCBHHHHHSH--HHHTTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred             cCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence            99999999963  2335699999999999999999999999    999999999999999999999999           


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                             ++.++|||||||++|||++ |+ |+......  +.. .....+     .  .. ..+
T Consensus       335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~-~~i~~~-----~--~~-~~~  403 (452)
T 1fmk_A          335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL-DQVERG-----Y--RM-PCP  403 (452)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHH-HHHHTT-----C--CC-CCC
T ss_pred             eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHH-HHHHcC-----C--CC-CCC
Confidence                                   6779999999999999999 88 87632211  111 111111     0  01 123


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..++..+.+|+.+||+.||++|||+.+|+
T Consensus       404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~  432 (452)
T 1fmk_A          404 PECPESLHDLMCQCWRKEPEERPTFEYLQ  432 (452)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            44566888999999999999999999873


No 102
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=5e-38  Score=297.82  Aligned_cols=226  Identities=15%  Similarity=0.179  Sum_probs=164.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....    ..+.+|+.++++++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            4678888999999999999999988889999999875433    778899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCC--CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          222 HPREGTLDNMLCPSP--HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |+. |+|.+++....  .....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN----KILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            998 59998885311  2234699999999999999999999999    999999999999999999999999       


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhh---hhhhhh--
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQ---RKFHEL--  338 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~---~~~~~~--  338 (376)
                                                 ++.++|||||||++|||++|+ ||..... .....+......   ..+...  
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  238 (317)
T 2pmi_A          159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK  238 (317)
T ss_dssp             TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred             CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence                                       577899999999999999999 8863322 221111111100   000000  


Q ss_pred             ---ccccCCC-------------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          339 ---LEEDLDF-------------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       339 ---~d~~~~~-------------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ..+....             ........+.+++.+||+.||++|||+.|++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l  292 (317)
T 2pmi_A          239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL  292 (317)
T ss_dssp             CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHh
Confidence               0000000             0112345788999999999999999999885


No 103
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-38  Score=309.59  Aligned_cols=216  Identities=21%  Similarity=0.248  Sum_probs=176.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcC-------CcEEEEEEecCCCCH----HHHHHHHHHHhcC-CCCCceeeeeeEecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSE-------YHAFVLVKRFTGDSS----SILEAEKKAAWSM-RHKNILGLLGYHQSD  213 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  213 (376)
                      .++|...+.||+|+||.||+|.+..       .+..||||++.....    ..+.+|+++++++ +||||+++++++...
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            4567888999999999999999742       336899999976543    6688999999999 899999999999999


Q ss_pred             CceEEEeecCCCCCHhhhcCCCC------------CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEE
Q 044707          214 SASVLVYPHPREGTLDNMLCPSP------------HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIF  281 (376)
Q Consensus       214 ~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NIL  281 (376)
                      +..++||||+.+|+|.+++....            .....+++..++.|+.||+.||.|||+.    +|+||||||+|||
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIl  223 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK----KCIHRDLAARNVL  223 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEE
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC----CEecCCCCcceEE
Confidence            99999999999999999996421            1124699999999999999999999999    9999999999999


Q ss_pred             EeCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHH
Q 044707          282 LRHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIE  324 (376)
Q Consensus       282 l~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~  324 (376)
                      ++.++.+||+|                                   ++.++|||||||+++||++ |. |+......  +
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~  301 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--E  301 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--H
Confidence            99999999999                                   5678999999999999999 88 87633211  1


Q ss_pred             HHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          325 WARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       325 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .. ..+..+.     .   ...+......+.+++.+||+.||++|||+.+|+
T Consensus       302 ~~-~~~~~~~-----~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  344 (382)
T 3tt0_A          302 LF-KLLKEGH-----R---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV  344 (382)
T ss_dssp             HH-HHHHTTC-----C---CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HH-HHHHcCC-----C---CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            11 1111111     1   112334456788999999999999999999874


No 104
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=4.2e-39  Score=304.13  Aligned_cols=214  Identities=14%  Similarity=0.132  Sum_probs=174.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCc----
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSA----  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----  215 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....      ..+.+|+.++.+++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            4678888999999999999999988889999999976532      568899999999999999999999876554    


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---  292 (376)
                      .++||||+++|+|.+++.    ....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||+|   
T Consensus        91 ~~lv~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~  162 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGI  162 (311)
T ss_dssp             EEEEEECCCEEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred             cEEEEecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence            399999999999999994    345799999999999999999999999    999999999999999999999999   


Q ss_pred             ---------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhh
Q 044707          293 ---------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       293 ---------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~  338 (376)
                                                       ++.++||||||+++|||++|+ ||.......  ..............
T Consensus       163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--~~~~~~~~~~~~~~  240 (311)
T 3ork_A          163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--VAYQHVREDPIPPS  240 (311)
T ss_dssp             C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHCCCCCHH
T ss_pred             cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCCCcc
Confidence                                             567899999999999999999 886433221  11111111100000


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                      .      .......++.+++.+||+.||++||++.++
T Consensus       241 ~------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~  271 (311)
T 3ork_A          241 A------RHEGLSADLDAVVLKALAKNPENRYQTAAE  271 (311)
T ss_dssp             H------HSTTCCHHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred             c------ccCCCCHHHHHHHHHHHhcCHhhChhhHHH
Confidence            0      112234578889999999999999988764


No 105
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-38  Score=328.58  Aligned_cols=203  Identities=16%  Similarity=0.187  Sum_probs=170.1

Q ss_pred             eecCCCCEEEEEEEEc--CCcEEEEEEecCCCC----HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCCCCC
Q 044707          154 LMGECKNYVGYLGYLS--EYHAFVLVKRFTGDS----SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPREGT  227 (376)
Q Consensus       154 ~lG~G~fg~Vy~~~~~--~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  227 (376)
                      .||+|+||.||+|.+.  .++..||||+++...    .+.+.+|+.+|++++|||||+++++|.. +..++||||+.+|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999885  345789999998643    2789999999999999999999999876 56899999999999


Q ss_pred             HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------------
Q 044707          228 LDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------------  292 (376)
Q Consensus       228 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------------  292 (376)
                      |.+++..   ....+++..+..|+.||+.||+|||+.    +|+||||||+|||++.++.+||+|               
T Consensus       422 L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~----~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~  494 (613)
T 2ozo_A          422 LHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK----NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  494 (613)
T ss_dssp             HHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred             HHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC----CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence            9999963   356799999999999999999999999    999999999999999999999999               


Q ss_pred             ---------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHHHHHHHHhhhhhhhhhccccCCCCCh
Q 044707          293 ---------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLIEWARPLMLQRKFHELLEEDLDFSDM  348 (376)
Q Consensus       293 ---------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~~~~~~~~~~~~~~~~~d~~~~~~~~  348 (376)
                                           ++.++|||||||++|||++ |+ ||.... ..+..    .+..+.       .+ ..+.
T Consensus       495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~----~i~~~~-------~~-~~p~  562 (613)
T 2ozo_A          495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA----FIEQGK-------RM-ECPP  562 (613)
T ss_dssp             -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHH----HHHTTC-------CC-CCCT
T ss_pred             eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH----HHHcCC-------CC-CCCC
Confidence                                 6789999999999999998 88 886322 12111    111111       11 1344


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          349 HGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       349 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+...+.+|+..||+.||++||++.+|+
T Consensus       563 ~~~~~l~~li~~cl~~dP~~RPs~~~l~  590 (613)
T 2ozo_A          563 ECPPELYALMSDCWIYKWEDRPDFLTVE  590 (613)
T ss_dssp             TCCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            4567889999999999999999999873


No 106
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.5e-38  Score=295.75  Aligned_cols=211  Identities=14%  Similarity=0.158  Sum_probs=172.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCC---cEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEY---HAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..+   +..||+|.+.....    +.+.+|+.++++++||||+++++++. .+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            45678889999999999999998643   46799999876432    67889999999999999999999974 567899


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+.+|+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus        93 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  165 (281)
T 1mp8_A           93 IMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRY  165 (281)
T ss_dssp             EEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred             EEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC----CeecccccHHHEEECCCCCEEECccccccc
Confidence            9999999999999963   345799999999999999999999999    999999999999999999999999      


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHHHHHHHHhhhhhhhhhccc
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLIEWARPLMLQRKFHELLEE  341 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~~~~~~~~~~~~~~~~~d~  341 (376)
                                                  ++.++||||||+++|||++ |. ||.... ......    ...+        
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~----i~~~--------  233 (281)
T 1mp8_A          166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR----IENG--------  233 (281)
T ss_dssp             -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH----HHTT--------
T ss_pred             cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHH----HHcC--------
Confidence                                        5668999999999999997 88 876322 221111    1111        


Q ss_pred             cCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          342 DLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       342 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....+......+.+++.+||+.||++|||+.+|+
T Consensus       234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~  268 (281)
T 1mp8_A          234 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK  268 (281)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            11112334456788999999999999999999873


No 107
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=2.3e-38  Score=296.18  Aligned_cols=211  Identities=16%  Similarity=0.209  Sum_probs=176.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||++.+..+++.||+|++....      .+.+.+|+.+++.++|+||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            356788899999999999999999888999999986542      16788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+.+++|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        94 ~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           94 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EECCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence            99999999999984    346799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++||||||+++|+|++|+ |+......  +..... ..        .... 
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~-~~--------~~~~-  233 (294)
T 2rku_A          166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRI-KK--------NEYS-  233 (294)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH-HT--------TCCC-
T ss_pred             ccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-hh--------ccCC-
Confidence                                      466899999999999999999 88643221  111111 11        1111 


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||++|||+.+|+
T Consensus       234 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll  264 (294)
T 2rku_A          234 IPKHINPVAASLIQKMLQTDPTARPTINELL  264 (294)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred             CccccCHHHHHHHHHHcccChhhCcCHHHHh
Confidence            1223345778889999999999999999985


No 108
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=1.8e-38  Score=296.93  Aligned_cols=218  Identities=12%  Similarity=0.014  Sum_probs=175.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++..... ..+.+|+.++..+ +|+|++++++++......++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            4568888999999999999999988889999999875544 6788999999999 7999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC-----eEEcc------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR-----PMRIN------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~-----~kl~D------  292 (376)
                       +++|.+++..   ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.     +||+|      
T Consensus        89 -~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           89 -GPSLEDLLDL---CGRKFSVKTVAMAAKQMLARVQSIHEK----SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             -CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             -CCCHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhC----CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence             8999999963   345699999999999999999999999    9999999999999987776     99999      


Q ss_pred             ----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhhhhhh
Q 044707          293 ----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQRKFH  336 (376)
Q Consensus       293 ----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~~~~~  336 (376)
                                                        ++.++||||||+++|||++|+ ||..... ......... ..+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~  239 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI-GEKKQS  239 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH-HHHHHH
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH-HhhccC
Confidence                                              467899999999999999999 8873221 111111111 111100


Q ss_pred             hhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....    .....+..+.+++.+||+.||++|||+.+|+
T Consensus       240 ~~~~~----~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~  275 (298)
T 1csn_A          240 TPLRE----LCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  275 (298)
T ss_dssp             SCHHH----HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             ccHHH----HHhhCcHHHHHHHHHHhcCCcccCCCHHHHH
Confidence            00000    1122345788999999999999999999873


No 109
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1.4e-38  Score=311.01  Aligned_cols=210  Identities=15%  Similarity=0.155  Sum_probs=174.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...++||+|+||.||+|.+..+++.||||+++....      ..+..|..++.++ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            4678888999999999999999999889999999975432      4578899999876 89999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|..++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       131 V~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~----givHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             EEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEcCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence            999999999999994    346799999999999999999999999    999999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh------hHHHHHHHHhhhhhhhhh
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR------SLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~------~l~~~~~~~~~~~~~~~~  338 (376)
                                                 ++.++|||||||++|||++|+ ||.....      .....+....        
T Consensus       203 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i--------  274 (396)
T 4dc2_A          203 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--------  274 (396)
T ss_dssp             CCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH--------
T ss_pred             cccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH--------
Confidence                                       678999999999999999999 8852110      0111111111        


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                      ....+. .+......+.+|+.+||+.||.+||++
T Consensus       275 ~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          275 LEKQIR-IPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHCCCC-CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             hccccC-CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            111111 233345678889999999999999996


No 110
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.1e-38  Score=304.50  Aligned_cols=210  Identities=16%  Similarity=0.156  Sum_probs=174.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....      +.+.+|..++.++ +||||+++++++.+.+..++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            4568888999999999999999998889999999975432      5678899999987 89999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus        88 v~e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~DFG~a~~  159 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  159 (345)
T ss_dssp             EECCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred             EEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEECCCCCEEEEecccccc
Confidence            999999999999994    345799999999999999999999999    999999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh------hHHHHHHHHhhhhhhhhh
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR------SLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~------~l~~~~~~~~~~~~~~~~  338 (376)
                                                 ++.++|||||||++|||++|+ ||.....      .....+....        
T Consensus       160 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i--------  231 (345)
T 3a8x_A          160 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--------  231 (345)
T ss_dssp             SCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHH--------
T ss_pred             ccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHH--------
Confidence                                       677999999999999999999 8852110      0011111111        


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                      ...... .+......+.+++.+||+.||.+||++
T Consensus       232 ~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          232 LEKQIR-IPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHCCCC-CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             HcCCCC-CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            111111 233345678889999999999999996


No 111
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=2.9e-38  Score=296.26  Aligned_cols=215  Identities=14%  Similarity=0.109  Sum_probs=176.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||+|++.....   +.+.+|+.++..++||||+++++++...+..++||||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            5678888999999999999999998889999999876543   7888999999999999999999999999999999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----------  292 (376)
                      +++++|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|          
T Consensus        98 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  170 (302)
T 2j7t_A           98 CPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT  170 (302)
T ss_dssp             CTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred             CCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC----CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence            999999999852   245699999999999999999999999    999999999999999999999999          


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccC
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDL  343 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~  343 (376)
                                                  ++.++||||||+++|+|++|+ |+......  ........ +.     .+..
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~-~~-----~~~~  242 (302)
T 2j7t_A          171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAK-SD-----PPTL  242 (302)
T ss_dssp             HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHH-SC-----CCCC
T ss_pred             ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHHhc-cC-----Cccc
Confidence                                        456899999999999999999 87633211  11111111 10     0111


Q ss_pred             CCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          344 DFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       344 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       ..+......+.+++.+||+.||++|||+.+|+
T Consensus       243 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  274 (302)
T 2j7t_A          243 -LTPSKWSVEFRDFLKIALDKNPETRPSAAQLL  274 (302)
T ss_dssp             -SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHT
T ss_pred             -CCccccCHHHHHHHHHHcccChhhCCCHHHHh
Confidence             12333456788999999999999999999875


No 112
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=1.7e-38  Score=317.39  Aligned_cols=211  Identities=17%  Similarity=0.189  Sum_probs=177.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....      ..+.+|+.+++.++||||+++++++...+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4678888999999999999999998889999999965422      5788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        95 ~E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~----givHrDLkp~NIll~~~~~vkL~DFG~a~~~  166 (476)
T 2y94_A           95 MEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMM  166 (476)
T ss_dssp             EECCSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence            99999999999994    356799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                .+.++|||||||++|||++|+ ||......  .... .+..+        ... 
T Consensus       167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~-~i~~~--------~~~-  234 (476)
T 2y94_A          167 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFK-KICDG--------IFY-  234 (476)
T ss_dssp             CTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHH-HHHTT--------CCC-
T ss_pred             cccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHH-HHhcC--------CcC-
Confidence                                      257899999999999999999 88743321  1111 11111        111 


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||++|||+.+|+
T Consensus       235 ~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil  265 (476)
T 2y94_A          235 TPQYLNPSVISLLKHMLQVDPMKRATIKDIR  265 (476)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            1222345778899999999999999999874


No 113
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.5e-38  Score=295.92  Aligned_cols=209  Identities=18%  Similarity=0.223  Sum_probs=169.9

Q ss_pred             CCCCceecCCCCEEEEEEEEcCC---cEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCce-EEEe
Q 044707          149 FTTKALMGECKNYVGYLGYLSEY---HAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSAS-VLVY  220 (376)
Q Consensus       149 f~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-~lv~  220 (376)
                      |...++||+|+||.||+|.+..+   +..||+|.+.....    +.+.+|+.+++.++||||+++++++...+.. ++||
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            45568899999999999997543   34799999976443    6788999999999999999999999876665 9999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+.+|+|.+++.   .....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus       103 e~~~~~~L~~~~~---~~~~~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          103 PYMCHGDLLQFIR---SPQRNPTVKDLISFGLQVARGMEYLAEQ----KFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             CCCTTCBHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             ecccCCCHHHHHh---ccccCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            9999999999996   3456789999999999999999999999    999999999999999999999999        


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcC--hhhHHHHHHHHhhhhhhhhhcc
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQD--YRSLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~--~~~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                   ++.++||||||+++|+|++|. |+...  ...+....    ..+       
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~----~~~-------  244 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL----AQG-------  244 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH----HTT-------
T ss_pred             CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh----hcC-------
Confidence                                         467899999999999999977 65422  11211111    111       


Q ss_pred             ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       .....+......+.+++.+||+.||.+|||+.+|+
T Consensus       245 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll  279 (298)
T 3pls_A          245 -RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLV  279 (298)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHH
Confidence             00112333446788899999999999999998874


No 114
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=1e-38  Score=300.63  Aligned_cols=217  Identities=19%  Similarity=0.225  Sum_probs=176.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEE-----cCCcEEEEEEecCCCCH----HHHHHHHHHHhcC-CCCCceeeeeeEecCCc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYL-----SEYHAFVLVKRFTGDSS----SILEAEKKAAWSM-RHKNILGLLGYHQSDSA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~  215 (376)
                      .++|...+.||+|+||.||+|.+     ..+++.||||++.....    +.+.+|+.++.++ +||||+++++++...+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            45688889999999999999986     34568999999986543    6788999999999 89999999999999999


Q ss_pred             eEEEeecCCCCCHhhhcCCCCC--------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEE
Q 044707          216 SVLVYPHPREGTLDNMLCPSPH--------------NELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIF  281 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NIL  281 (376)
                      .++||||+++|+|.+++.....              ....+++..++.++.|++.||.|||+.    +|+||||||+|||
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil  177 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK----NCIHRDLAARNIL  177 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCccceEE
Confidence            9999999999999999964211              123599999999999999999999999    9999999999999


Q ss_pred             EeCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHH
Q 044707          282 LRHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIE  324 (376)
Q Consensus       282 l~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~  324 (376)
                      ++.++.+||+|                                   ++.++||||||+++|||++ |+ |+.......  
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--  255 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--  255 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--
Confidence            99999999999                                   5778999999999999999 88 876332211  


Q ss_pred             HHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          325 WARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       325 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ........+     ....   .+......+.+++.+||+.||.+|||+.+|+
T Consensus       256 ~~~~~~~~~-----~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  299 (313)
T 1t46_A          256 KFYKMIKEG-----FRML---SPEHAPAEMYDIMKTCWDADPLKRPTFKQIV  299 (313)
T ss_dssp             HHHHHHHHT-----CCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHhccC-----CCCC---CcccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            011111111     1111   2233446788899999999999999999874


No 115
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=3.3e-38  Score=294.76  Aligned_cols=214  Identities=22%  Similarity=0.275  Sum_probs=171.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...++||+|+||.||+|.+..   .||+|++.....     +.+.+|+.++++++|+||+++++++ ..+..++||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            4568888999999999999998753   499999975443     6788999999999999999999965 456689999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+.+++|.+++.   .....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus        99 e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~qi~~~L~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A           99 QWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS  171 (289)
T ss_dssp             ECCCEEEHHHHHT---TC---CCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred             EecCCCcHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHhC----CcccccCccceEEECCCCCEEEccceeccccc
Confidence            9999999999996   3456799999999999999999999999    999999999999999999999999        


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEE  341 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~  341 (376)
                                                    ++.++||||||+++|||++|+ ||......  ..+......+    ...+
T Consensus       172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~----~~~~  245 (289)
T 3og7_A          172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIEMVGRG----SLSP  245 (289)
T ss_dssp             ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--HHHHHHHHHT----SCCC
T ss_pred             cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--HHHHHHhccc----ccCc
Confidence                                          344899999999999999999 88632211  1111111111    1122


Q ss_pred             cCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          342 DLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       342 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ........++..+.+++.+||+.||++|||+.+|+
T Consensus       246 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell  280 (289)
T 3og7_A          246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL  280 (289)
T ss_dssp             CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             chhhccccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            22223344557889999999999999999999874


No 116
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.9e-38  Score=297.23  Aligned_cols=215  Identities=18%  Similarity=0.205  Sum_probs=172.1

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCCC
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPRE  225 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  225 (376)
                      ++|...+.||+|+||.||+|.+.  ++.||||.+..... +.+.+|+.++++++||||+++++++.+  ..++||||+++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~   83 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG   83 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence            46777899999999999999986  58899999986655 778999999999999999999998774  47999999999


Q ss_pred             CCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC-eEEcc------------
Q 044707          226 GTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR-PMRIN------------  292 (376)
Q Consensus       226 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~-~kl~D------------  292 (376)
                      |+|.+++... .....+++..++.++.|++.||.|||+..+. +|+||||||+|||++.++. +||+|            
T Consensus        84 ~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~  161 (307)
T 2eva_A           84 GSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT  161 (307)
T ss_dssp             CBHHHHHHCS-SSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred             CCHHHHHhcc-CCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEcccccccccccccc
Confidence            9999999642 2223588999999999999999999993211 8999999999999998887 79999            


Q ss_pred             ------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHH
Q 044707          293 ------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYR  353 (376)
Q Consensus       293 ------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  353 (376)
                                        ++.++||||||+++|||++|+ ||...........+.... +        ............
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~  232 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-G--------TRPPLIKNLPKP  232 (307)
T ss_dssp             ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT-T--------CCCCCBTTCCHH
T ss_pred             cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc-C--------CCCCcccccCHH
Confidence                              678999999999999999999 886332222111111111 1        011122334457


Q ss_pred             HHHHHHHccccCCCCCCCccccC
Q 044707          354 VMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       354 l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +.+++.+||+.||++|||+.+|+
T Consensus       233 l~~li~~~l~~dp~~Rps~~ell  255 (307)
T 2eva_A          233 IESLMTRCWSKDPSQRPSMEEIV  255 (307)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHhcCChhhCcCHHHHH
Confidence            88899999999999999999874


No 117
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2.6e-38  Score=302.05  Aligned_cols=211  Identities=16%  Similarity=0.205  Sum_probs=177.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||++.+..+++.||+|++....      .+.+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            356888899999999999999999888999999986542      16788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+.+++|.+++.    ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus       120 ~e~~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          120 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             ECCCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC----CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence            99999999999984    346799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++||||||+++|||++|+ ||......  +..... ..+      ...   
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~-~~~------~~~---  259 (335)
T 2owb_A          192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRI-KKN------EYS---  259 (335)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH-HHT------CCC---
T ss_pred             ccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHH-hcC------CCC---
Confidence                                      566899999999999999999 88643221  111111 111      011   


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||++|||+.||+
T Consensus       260 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  290 (335)
T 2owb_A          260 IPKHINPVAASLIQKMLQTDPTARPTINELL  290 (335)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred             CCccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            1223335678889999999999999999985


No 118
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1.7e-38  Score=304.77  Aligned_cols=217  Identities=16%  Similarity=0.086  Sum_probs=174.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEEeecCC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLVYPHPR  224 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  224 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++..... ...+|++++.++ +||||+++++++.+++..++||||+.
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   99 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK   99 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence            5678889999999999999999998889999999976542 345788888887 79999999999999999999999999


Q ss_pred             CCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC----CCeEEcc--------
Q 044707          225 EGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD----LRPMRIN--------  292 (376)
Q Consensus       225 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~----~~~kl~D--------  292 (376)
                      +|+|.+++..    ...+++..+..++.||+.||.|||+.    +|+||||||+|||+..+    +.+||+|        
T Consensus       100 gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~----givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~  171 (342)
T 2qr7_A          100 GGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ----GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR  171 (342)
T ss_dssp             SCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred             CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC----CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence            9999999953    46799999999999999999999999    99999999999998543    3489999        


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                               ++.++|||||||++|||++|. ||..........+...+..+...  ..   ...
T Consensus       172 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~--~~---~~~  246 (342)
T 2qr7_A          172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS--LS---GGY  246 (342)
T ss_dssp             CTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC--CC---STT
T ss_pred             CCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc--cC---ccc
Confidence                                     456899999999999999999 88743221111111222222111  00   002


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +......+.+|+.+||+.||++|||+.+|+
T Consensus       247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~il  276 (342)
T 2qr7_A          247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVL  276 (342)
T ss_dssp             TTTSCHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             cccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            233456788899999999999999999875


No 119
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=3.9e-38  Score=296.84  Aligned_cols=219  Identities=15%  Similarity=0.131  Sum_probs=177.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC---H---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS---S---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|....+++.||+|++....   .   ..+.+|+.++++++||||+++++++...+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            456888899999999999999998888999999987532   1   6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+.+|+|.+++.........+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR----RVMHRDIKPANVFITATGVVKLGDLGLGRFF  186 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC----CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence            999999999999853212356799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++||||||+++|+|++|+ ||............... .+..     +..  
T Consensus       187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~-----~~~--  258 (310)
T 2wqm_A          187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDY-----PPL--  258 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH-TTCS-----CCC--
T ss_pred             cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh-cccC-----CCC--
Confidence                                      567899999999999999999 88644333222222111 1111     111  


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ........+.+++.+||+.||++|||+.+|+
T Consensus       259 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~il  289 (310)
T 2wqm_A          259 PSDHYSEELRQLVNMCINPDPEKRPDVTYVY  289 (310)
T ss_dssp             CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cccccCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            1123345788899999999999999999874


No 120
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=2.5e-38  Score=300.11  Aligned_cols=215  Identities=17%  Similarity=0.147  Sum_probs=177.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC---------HHHHHHHHHHHhcCCCCCceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS---------SSILEAEKKAAWSMRHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  216 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||+|++....         .+.+.+|+.++.+++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            456888899999999999999999888999999986543         26789999999999999999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC----CeEEcc
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL----RPMRIN  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~----~~kl~D  292 (376)
                      ++||||+++++|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++    .+||+|
T Consensus        91 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~lH~~----~ivH~dikp~NIl~~~~~~~~~~~kl~D  162 (321)
T 2a2a_A           91 VLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK----KIAHFDLKPENIMLLDKNIPIPHIKLID  162 (321)
T ss_dssp             EEEECCCCSCBHHHHHH----TCSCEEHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred             EEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence            99999999999999995    346799999999999999999999999    999999999999999888    799999


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhc
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~  339 (376)
                                                      ++.++||||||+++|+|++|. ||......  +..... .....  ..
T Consensus       163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i-~~~~~--~~  237 (321)
T 2a2a_A          163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANI-TSVSY--DF  237 (321)
T ss_dssp             CTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHH-HTTCC--CC
T ss_pred             CccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--HHHHHH-Hhccc--cc
Confidence                                            577999999999999999999 88643221  111111 11000  00


Q ss_pred             cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ++.   ........+.+++.+||+.||++|||+.|++
T Consensus       238 ~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l  271 (321)
T 2a2a_A          238 DEE---FFSHTSELAKDFIRKLLVKETRKRLTIQEAL  271 (321)
T ss_dssp             CHH---HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHH
T ss_pred             Chh---hhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            000   1122335678899999999999999999874


No 121
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.8e-38  Score=308.06  Aligned_cols=210  Identities=19%  Similarity=0.137  Sum_probs=167.6

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCCCCCH
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPREGTL  228 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  228 (376)
                      .+.||+|+||.||+|.+..+++.||+|++.....   +.+.+|+.++.+++||||+++++++...+..+|||||+++|+|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            5679999999999999988889999999987553   7789999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE--eCCCCeEEcc--------------
Q 044707          229 DNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL--RHDLRPMRIN--------------  292 (376)
Q Consensus       229 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl--~~~~~~kl~D--------------  292 (376)
                      .+++..   ....+++..+..++.||+.||.|||+.    +|+||||||+|||+  +.++.+||+|              
T Consensus       174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~  246 (373)
T 2x4f_A          174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQM----YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK  246 (373)
T ss_dssp             HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred             HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC----CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence            998852   345699999999999999999999999    99999999999999  5667899999              


Q ss_pred             ------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHH
Q 044707          293 ------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYR  353 (376)
Q Consensus       293 ------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  353 (376)
                                        ++.++|||||||++|||++|+ ||......  +.+..... ..+ .....    ........
T Consensus       247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~~-~~~-~~~~~----~~~~~~~~  318 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--ETLNNILA-CRW-DLEDE----EFQDISEE  318 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHH-TCC-CSCSG----GGTTSCHH
T ss_pred             cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh-ccC-CCChh----hhccCCHH
Confidence                              567899999999999999999 88743321  11111111 100 00000    11223457


Q ss_pred             HHHHHHHccccCCCCCCCccccC
Q 044707          354 VMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       354 l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +.+|+.+||+.||.+|||+.|++
T Consensus       319 ~~~li~~~L~~dp~~Rps~~e~l  341 (373)
T 2x4f_A          319 AKEFISKLLIKEKSWRISASEAL  341 (373)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHh
Confidence            88899999999999999999874


No 122
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=2.2e-38  Score=294.89  Aligned_cols=211  Identities=17%  Similarity=0.182  Sum_probs=177.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|....++..||+|++....      ...+.+|+.++..++||||+++++++.+.+..++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            467888899999999999999999888999999986432      26788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++..    ...+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        93 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           93 LEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            999999999999953    35799999999999999999999999    999999999999999999999999       


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                              ++.++||||||+++|+|++|+ ||......  ......         ...... .+
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~---------~~~~~~-~~  232 (284)
T 2vgo_A          165 PSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRI---------VNVDLK-FP  232 (284)
T ss_dssp             SSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH---------HTTCCC-CC
T ss_pred             cccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHH---------hccccC-CC
Confidence                                    567999999999999999999 88633221  111111         111111 22


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||.+|||+.+|+
T Consensus       233 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll  261 (284)
T 2vgo_A          233 PFLSDGSKDLISKLLRYHPPQRLPLKGVM  261 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CcCCHHHHHHHHHHhhcCHhhCCCHHHHh
Confidence            33345788899999999999999999874


No 123
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.4e-37  Score=290.43  Aligned_cols=216  Identities=17%  Similarity=0.187  Sum_probs=175.4

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      +.|.....||+|+||.||+|.+..++..||+|.+.....   +.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            345555689999999999999988889999999876543   77889999999999999999999999999999999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC-CCCeEEcc----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH-DLRPMRIN----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~-~~~~kl~D----------  292 (376)
                      ++++|.+++... .....+++..+..++.|++.||.|||+.    +|+||||||+|||++. ++.+||+|          
T Consensus       102 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~  176 (295)
T 2clq_A          102 PGGSLSALLRSK-WGPLKDNEQTIGFYTKQILEGLKYLHDN----QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI  176 (295)
T ss_dssp             SEEEHHHHHHHT-TCCCTTCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred             CCCCHHHHHHhh-ccCCCccHHHHHHHHHHHHHHHHHHHhC----CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence            999999999642 2234678999999999999999999999    9999999999999998 89999999          


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                               ++.++||||||+++|||++|+ ||...............      ....+.   .
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~---~  247 (295)
T 2clq_A          177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM------FKVHPE---I  247 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH------HCCCCC---C
T ss_pred             CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc------cccccc---c
Confidence                                     456899999999999999999 88632221111110000      011111   2


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +......+.+++.+||+.||++|||+.+++
T Consensus       248 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  277 (295)
T 2clq_A          248 PESMSAEAKAFILKCFEPDPDKRACANDLL  277 (295)
T ss_dssp             CTTSCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            333456788899999999999999999874


No 124
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=2.9e-38  Score=304.28  Aligned_cols=224  Identities=16%  Similarity=0.182  Sum_probs=179.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .++|...+.||+|+||.||+|.+..++..||+|++.....    +.+.+|+.++..++||||+++++++...+..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            3568888999999999999999998889999999976532    678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+++|+|.+++..    ...+++..+..|+.+++.||.|||+..   +|+||||||+|||++.++.+||+|         
T Consensus       112 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  184 (360)
T 3eqc_A          112 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  184 (360)
T ss_dssp             CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             CCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence            9999999999943    457999999999999999999999842   799999999999999999999999         


Q ss_pred             ----------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhh-----------------
Q 044707          293 ----------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQ-----------------  332 (376)
Q Consensus       293 ----------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~-----------------  332 (376)
                                            ++.++|||||||++|||++|+ ||.................                 
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (360)
T 3eqc_A          185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  264 (360)
T ss_dssp             HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred             ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence                                  577899999999999999999 8874332211111100000                 


Q ss_pred             --------------hhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 --------------RKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 --------------~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                                    ..+..+....... ........+.+++.+||+.||++|||+.|+|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  323 (360)
T 3eqc_A          265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM  323 (360)
T ss_dssp             ---------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred             cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHh
Confidence                          0000111111111 1222345788999999999999999999874


No 125
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=3e-38  Score=300.88  Aligned_cols=223  Identities=19%  Similarity=0.230  Sum_probs=178.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....     +.+.+|+.++++++||||+++++++...+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            4668888999999999999999998889999999865433     56779999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+.+++|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus       104 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (331)
T 4aaa_A          104 EFVDHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH----NIIHRDIKPENILVSQSGVVKLCDFGFARTLA  175 (331)
T ss_dssp             ECCSEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             ecCCcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC----CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence            9999999998873    345799999999999999999999999    999999999999999999999999        


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHH-----------hhhh
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPL-----------MLQR  333 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~-----------~~~~  333 (376)
                                                ++.++|||||||++|||++|+ ||..... .........           +...
T Consensus       176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (331)
T 4aaa_A          176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN  255 (331)
T ss_dssp             --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred             CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence                                      567899999999999999999 8763322 111111000           0000


Q ss_pred             -hhhhhccccCCC------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 -KFHELLEEDLDF------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 -~~~~~~d~~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       .......+....      ........+.+|+.+||+.||++|||+.|||
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell  305 (331)
T 4aaa_A          256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL  305 (331)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred             cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHh
Confidence             000011111110      1123456788999999999999999999985


No 126
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.3e-38  Score=304.31  Aligned_cols=223  Identities=15%  Similarity=0.119  Sum_probs=176.7

Q ss_pred             HHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC--------HHHHHHHHHHHhcCCCCCceeeeeeEecC
Q 044707          142 IMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS--------SSILEAEKKAAWSMRHKNILGLLGYHQSD  213 (376)
Q Consensus       142 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  213 (376)
                      +....++|...+.||+|+||.||+|.+..++..||+|++....        .+.+.+|+.++++++||||+++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            3455778999999999999999999998888999999986432        17788999999999999999999999999


Q ss_pred             CceEEEeecCCCCCHhhhcCCCC------------------------------------CCCCCCCHHHHHHHHHHHHHH
Q 044707          214 SASVLVYPHPREGTLDNMLCPSP------------------------------------HNELKLKFQQKLKIAIGIAEG  257 (376)
Q Consensus       214 ~~~~lv~e~~~~gsL~~~l~~~~------------------------------------~~~~~l~~~~~~~i~~~i~~g  257 (376)
                      +..++||||+++|+|.+++....                                    .....+++..+..|+.|++.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            99999999999999999984200                                    002234677888999999999


Q ss_pred             hHHhhhcCCCCCeeecCCCCCcEEEeCCC--CeEEcc---------------------------------------CCCc
Q 044707          258 VRYMHQECPRGPIAHGELQLHNIFLRHDL--RPMRIN---------------------------------------AITK  296 (376)
Q Consensus       258 L~yLH~~~~~~~iiH~Dlkp~NILl~~~~--~~kl~D---------------------------------------~~~~  296 (376)
                      |.|||+.    +|+||||||+|||++.++  .+||+|                                       ++.+
T Consensus       181 l~~LH~~----~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          181 LHYLHNQ----GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHHT----TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHHC----CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            9999999    999999999999998776  799998                                       5579


Q ss_pred             chhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          297 IRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       297 ~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                      +|||||||++|||++|+ ||......  +......... . ....+    ........+.+++.+||+.||.+|||+.++
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~-~-~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~  328 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDA--DTISQVLNKK-L-CFENP----NYNVLSPLARDLLSNLLNRNVDERFDAMRA  328 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC-C-CTTSG----GGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChH--HHHHHHHhcc-c-ccCCc----ccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence            99999999999999999 88633221  1111111110 0 00000    112234578889999999999999999987


Q ss_pred             C
Q 044707          376 L  376 (376)
Q Consensus       376 l  376 (376)
                      +
T Consensus       329 l  329 (345)
T 3hko_A          329 L  329 (345)
T ss_dssp             H
T ss_pred             h
Confidence            4


No 127
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=3.1e-38  Score=300.08  Aligned_cols=216  Identities=21%  Similarity=0.226  Sum_probs=176.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEE--EEEecCCCCH----HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFV--LVKRFTGDSS----SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~v--avK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..++..+  |+|.+.....    +.+.+|+.++.++ +||||+++++++...+..++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            367888899999999999999998776654  9999875332    6688999999999 89999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCC------------CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC
Q 044707          219 VYPHPREGTLDNMLCPSP------------HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL  286 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~  286 (376)
                      ||||+++|+|.+++....            .....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK----QFIHRDLAARNILVGENY  179 (327)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECGGG
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCccceEEEcCCC
Confidence            999999999999996521            1235799999999999999999999999    999999999999999999


Q ss_pred             CeEEcc--------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhh
Q 044707          287 RPMRIN--------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQ  332 (376)
Q Consensus       287 ~~kl~D--------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~  332 (376)
                      .+||+|                                ++.++||||||+++|||++ |+ ||......  +.. .....
T Consensus       180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~-~~~~~  256 (327)
T 1fvr_A          180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELY-EKLPQ  256 (327)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH-HHGGG
T ss_pred             eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--HHH-HHhhc
Confidence            999999                                5779999999999999998 88 88633221  111 11111


Q ss_pred             hhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 RKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +     ...   ..+......+.+++.+||+.||++|||+.+++
T Consensus       257 ~-----~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  292 (327)
T 1fvr_A          257 G-----YRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQIL  292 (327)
T ss_dssp             T-----CCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             C-----CCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            1     111   12333456788999999999999999998874


No 128
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4.3e-38  Score=295.57  Aligned_cols=215  Identities=13%  Similarity=0.126  Sum_probs=172.2

Q ss_pred             hcCCCCC-ceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHH-hcCCCCCceeeeeeEec----CCceEEE
Q 044707          146 TDKFTTK-ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAA-WSMRHKNILGLLGYHQS----DSASVLV  219 (376)
Q Consensus       146 ~~~f~~~-~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~----~~~~~lv  219 (376)
                      .++|... +.||+|+||.||+|.+..+++.||+|++...  ..+.+|+.++ +.++||||+++++++..    ....++|
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   93 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   93 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence            4566665 7799999999999999888899999999753  5677899888 56689999999999876    6778999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC---CCCeEEcc----
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH---DLRPMRIN----  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~---~~~~kl~D----  292 (376)
                      |||+++|+|.+++..  .....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.   ++.+||+|    
T Consensus        94 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           94 MECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSI----NIAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             ECCCCSCBHHHHHHH--CTTCCCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EeecCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            999999999999975  3445799999999999999999999999    9999999999999998   78899999    


Q ss_pred             -------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC----hHHHHHHHHHHHH
Q 044707          293 -------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD----MHGIYRVMAAATQ  360 (376)
Q Consensus       293 -------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~l~~l~~~  360 (376)
                             ++.++|||||||++|||++|+ ||.......       ........+...... .+    ......+.+++.+
T Consensus       168 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~  239 (299)
T 3m2w_A          168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------ISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRN  239 (299)
T ss_dssp             EECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------CCSCCSSCTTCCS-SCHHHHTTSCHHHHHHHHH
T ss_pred             cccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-------hhHHHHHHHhhcccc-CCchhcccCCHHHHHHHHH
Confidence                   778999999999999999999 886322110       000000001111110 11    2345678899999


Q ss_pred             ccccCCCCCCCccccC
Q 044707          361 CTISKPTSRPCMSEVL  376 (376)
Q Consensus       361 Cl~~dP~~RPs~~evl  376 (376)
                      ||+.||++|||+.|++
T Consensus       240 ~l~~dP~~Rps~~e~l  255 (299)
T 3m2w_A          240 LLKTEPTQRMTITEFM  255 (299)
T ss_dssp             HTCSSTTTSCCHHHHH
T ss_pred             HcccChhhCCCHHHHh
Confidence            9999999999999874


No 129
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=5.4e-38  Score=294.97  Aligned_cols=211  Identities=16%  Similarity=0.127  Sum_probs=176.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .+.|...+.||+|+||.||+|....+++.||+|++.....    +.+.+|+.++..++||||+++++++...+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            3457788999999999999999988889999999865432    788999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+++++|.+++..     ..+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|         
T Consensus       101 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A          101 YLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE----KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             CCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             eCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            9999999999953     4689999999999999999999999    999999999999999999999999         


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                              ++.++||||||+++|+|++|+ |+.......  .. .....+     ..+.   .+
T Consensus       172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~-~~~~~~-----~~~~---~~  240 (303)
T 3a7i_A          172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VL-FLIPKN-----NPPT---LE  240 (303)
T ss_dssp             TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH-HHHHHS-----CCCC---CC
T ss_pred             cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HH-HHhhcC-----CCCC---Cc
Confidence                                    567899999999999999999 876332111  11 011111     1111   22


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.+|+
T Consensus       241 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll  269 (303)
T 3a7i_A          241 GNYSKPLKEFVEACLNKEPSFRPTAKELL  269 (303)
T ss_dssp             SSCCHHHHHHHHHHCCSSGGGSCCHHHHT
T ss_pred             cccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            23345788899999999999999999885


No 130
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=2.4e-38  Score=295.55  Aligned_cols=211  Identities=18%  Similarity=0.170  Sum_probs=171.6

Q ss_pred             CCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEec----CCceEEE
Q 044707          149 FTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQS----DSASVLV  219 (376)
Q Consensus       149 f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv  219 (376)
                      |...+.||+|+||.||+|.+..++..||+|.+.....     +.+.+|+.+++.++||||+++++++..    ....++|
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            5666789999999999999998889999999875432     678899999999999999999998865    4558999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC--eeecCCCCCcEEEe-CCCCeEEcc----
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP--IAHGELQLHNIFLR-HDLRPMRIN----  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~--iiH~Dlkp~NILl~-~~~~~kl~D----  292 (376)
                      |||+++|+|.+++.    ....+++..+..|+.|++.||.|||+.    +  |+||||||+|||++ .++.+||+|    
T Consensus       108 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~----~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          108 TELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTR----TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             EECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTS----SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             EEecCCCCHHHHHH----HccCCCHHHHHHHHHHHHHHHHHHHcC----CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence            99999999999994    346799999999999999999999999    8  99999999999998 789999999    


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++||||||+++|+|++|+ ||...... ..... ....+.....       
T Consensus       180 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~-~~~~~~~~~~-------  250 (290)
T 1t4h_A          180 TLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYR-RVTSGVKPAS-------  250 (290)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHH-HHTTTCCCGG-------
T ss_pred             ccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-HHHHH-HHhccCCccc-------
Confidence                                      577999999999999999999 88632211 11111 1111111111       


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||++|||+.+|+
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  281 (290)
T 1t4h_A          251 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLL  281 (290)
T ss_dssp             GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             cCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            1222235688899999999999999999874


No 131
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.5e-38  Score=304.04  Aligned_cols=205  Identities=17%  Similarity=0.181  Sum_probs=175.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----------HHHHHHHHHHhcCCCCCceeeeeeEecCC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----------SILEAEKKAAWSMRHKNILGLLGYHQSDS  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  214 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....           ..+.+|+.++++++||||+++++++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            5678999999999999999999998889999999976531           35678999999999999999999999999


Q ss_pred             ceEEEeecCCCC-CHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-
Q 044707          215 ASVLVYPHPREG-TLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-  292 (376)
Q Consensus       215 ~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-  292 (376)
                      ..++||||+.+| +|.+++.    ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+| 
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~Df  174 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFRQLVSAVGYLRLK----DIIHRDIKDENIVIAEDFTIKLIDF  174 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHH----TCCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC----CeEEeccCHHHEEEcCCCcEEEeec
Confidence            999999999777 9999994    346799999999999999999999999    999999999999999999999999 


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhc
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~  339 (376)
                                                      .+.++|||||||++|||++|+ ||....                 ...
T Consensus       175 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----------------~~~  237 (335)
T 3dls_A          175 GSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE-----------------ETV  237 (335)
T ss_dssp             TTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG-----------------GGT
T ss_pred             ccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH-----------------HHH
Confidence                                            267899999999999999999 885211                 111


Q ss_pred             cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..... .+......+.+++.+||+.||++|||+.+|+
T Consensus       238 ~~~~~-~~~~~~~~l~~li~~~L~~dP~~Rps~~ell  273 (335)
T 3dls_A          238 EAAIH-PPYLVSKELMSLVSGLLQPVPERRTTLEKLV  273 (335)
T ss_dssp             TTCCC-CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hhccC-CCcccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            11111 1222345788899999999999999999874


No 132
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.7e-38  Score=300.57  Aligned_cols=222  Identities=13%  Similarity=0.137  Sum_probs=174.9

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeec
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      ++|...+.||+|+||.||+|.+..+++.||+|++.....    ..+.+|+.+++.++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            568888999999999999999998889999999975543    2445799999999999999999999999999999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----------  292 (376)
                      +. |+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|          
T Consensus        82 ~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           82 LD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQ----KVLHRDLKPQNLLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             CS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT----TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             cc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence            97 599998863   345799999999999999999999999    999999999999999999999999          


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hhHHHHHHHHhhh---hhhhhhc----
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RSLIEWARPLMLQ---RKFHELL----  339 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~l~~~~~~~~~~---~~~~~~~----  339 (376)
                                              ++.++|||||||++|||++|+ ||.... ......+......   ..+....    
T Consensus       154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  233 (324)
T 3mtl_A          154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE  233 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred             ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence                                    578899999999999999999 886332 2222222221110   0000000    


Q ss_pred             -----cccCCC-----CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 -----EEDLDF-----SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 -----d~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                           .+....     ........+.+|+.+||+.||++|||+.|++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  280 (324)
T 3mtl_A          234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM  280 (324)
T ss_dssp             HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHh
Confidence                 000000     1122345678899999999999999999986


No 133
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=5.4e-39  Score=305.39  Aligned_cols=211  Identities=17%  Similarity=0.165  Sum_probs=170.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcE----EEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHA----FVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASV  217 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  217 (376)
                      .++|...+.||+|+||.||+|.+..++.    +||+|.+.....    ..+.+|+.++.+++||||+++++++. ++..+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence            3567788999999999999999876654    388888754432    56778999999999999999999986 46689


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----  292 (376)
                      +||||+.+|+|.+++..   ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|     
T Consensus        91 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~  163 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLEEH----GMVHRNLAARNVLLKSPSQVQVADFGVAD  163 (325)
T ss_dssp             EEEECCTTCBSHHHHHS---SGGGSCTTHHHHHHHHHHHHHHHHHHT----TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred             EEEEeCCCCCHHHHHHH---ccccCCHHHHHHHHHHHHHHHHHHHhC----CCCCCccchheEEECCCCeEEECCCCccc
Confidence            99999999999999963   345789999999999999999999999    999999999999999999999999     


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhh-HHHHHHHHhhhhhhhhhc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRS-LIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~-l~~~~~~~~~~~~~~~~~  339 (376)
                                                    ++.++||||||+++|||++ |+ ||...... +...    ...+.     
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~----~~~~~-----  234 (325)
T 3kex_A          164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL----LEKGE-----  234 (325)
T ss_dssp             GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH----HHTTC-----
T ss_pred             ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH----HHcCC-----
Confidence                                          6779999999999999999 88 88633221 1111    11110     


Q ss_pred             cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...   .+......+.+++.+||+.||.+|||+.+|+
T Consensus       235 ~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~el~  268 (325)
T 3kex_A          235 RLA---QPQICTIDVYMVMVKCWMIDENIRPTFKELA  268 (325)
T ss_dssp             BCC---CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHH
T ss_pred             CCC---CCCcCcHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            000   1222334677888999999999999999874


No 134
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=2e-38  Score=306.27  Aligned_cols=220  Identities=11%  Similarity=0.153  Sum_probs=172.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCC-----cEEEEEEecCCCCH--------------HHHHHHHHHHhcCCCCCceee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEY-----HAFVLVKRFTGDSS--------------SILEAEKKAAWSMRHKNILGL  206 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~~--------------~~~~~E~~~l~~l~h~nIv~l  206 (376)
                      .++|...+.||+|+||.||+|.+..+     ++.||||++.....              ..+..|+..+..++|+||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            45788899999999999999998764     47899999876553              233456667778899999999


Q ss_pred             eeeEecC----CceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE
Q 044707          207 LGYHQSD----SASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL  282 (376)
Q Consensus       207 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl  282 (376)
                      ++++...    ...+|||||+ +|+|.+++..   ....+++..+..|+.||+.||.|||+.    +|+||||||+|||+
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~----~iiHrDlkp~Nill  185 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH----EYVHGDIKASNLLL  185 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEE
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC----CeEEecCCHHHEEE
Confidence            9998764    4579999999 9999999963   346799999999999999999999999    99999999999999


Q ss_pred             e--CCCCeEEcc----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcC-
Q 044707          283 R--HDLRPMRIN----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQD-  318 (376)
Q Consensus       283 ~--~~~~~kl~D----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~-  318 (376)
                      +  .++.+||+|                                        ++.++|||||||++|||++|+ ||... 
T Consensus       186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~  265 (364)
T 3op5_A          186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL  265 (364)
T ss_dssp             ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence            9  889999999                                        567889999999999999999 88732 


Q ss_pred             -hhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          319 -YRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       319 -~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       ............ ...+..++++.+.  ....+..+.+++..||+.||++||++.+|+
T Consensus       266 ~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~  321 (364)
T 3op5_A          266 KDPKYVRDSKIRY-RENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLR  321 (364)
T ss_dssp             TCHHHHHHHHHHH-HHCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             cCHHHHHHHHHHh-hhhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence             222222222111 1223334443332  123345788899999999999999998863


No 135
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.3e-38  Score=301.21  Aligned_cols=212  Identities=17%  Similarity=0.197  Sum_probs=173.4

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCC----cEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEY----HAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~----~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      +.|...+.||+|+||.||+|.+..+    +..||||.+.....    ..+.+|+.++.+++||||+++++++...+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            3455678999999999999998643    35699999976433    568899999999999999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..   ....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       124 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          124 ITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM----NYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             EEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             EEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            9999999999999963   346799999999999999999999999    999999999999999999999999      


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhcc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                    ++.++||||||+++|||++ |+ ||......  +.. ..+..+       
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~-~~~~~~-------  266 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVM-KAINDG-------  266 (333)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH-HHHHTT-------
T ss_pred             hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHH-HHHHCC-------
Confidence                                          5668999999999999999 88 88633211  111 111111       


Q ss_pred             ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       .....+......+.+++.+||+.||++||++.+|+
T Consensus       267 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~  301 (333)
T 1mqb_A          267 -FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIV  301 (333)
T ss_dssp             -CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             -CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence             00112334456788999999999999999998874


No 136
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=8.5e-39  Score=303.99  Aligned_cols=224  Identities=18%  Similarity=0.190  Sum_probs=177.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEE----cCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEe--cCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYL----SEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQ--SDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~----~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+    ..++..||||++.....   +.+.+|+.++++++|+||+++++++.  +....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            35688889999999999999995    45679999999987655   66899999999999999999999887  45668


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ++||||+++|+|.+++..   ....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|    
T Consensus       102 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  174 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSR----RCVHRDLAARNILVESEAHVKIADFGLA  174 (327)
T ss_dssp             EEEEECCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred             EEEEeecCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCChhhEEECCCCCEEEcccccc
Confidence            999999999999999953   234699999999999999999999999    999999999999999999999999    


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHH---HHHhhhhhhh
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWA---RPLMLQRKFH  336 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~---~~~~~~~~~~  336 (376)
                                                      ++.++||||||+++|+|++|+ |+...........   ........+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
T 3lxl_A          175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL  254 (327)
T ss_dssp             EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred             eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence                                            366899999999999999999 7753222111100   0000001111


Q ss_pred             hhccccCC-CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELLEEDLD-FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~d~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..+..... ..+......+.+++.+||+.||++|||+.+|+
T Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  295 (327)
T 3lxl_A          255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALG  295 (327)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            11111111 13445567889999999999999999999874


No 137
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=8.9e-39  Score=317.16  Aligned_cols=211  Identities=15%  Similarity=0.128  Sum_probs=170.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|....+++.||||++.....      ..+.+|+.+++.++||||+++++++...+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            4678889999999999999999998889999999874321      5677899999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhh-cCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQ-ECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~-~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      |||+++|+|.+++.    ....+++..+..++.||+.||+|||+ .    +|+||||||+|||++.++.+||+|      
T Consensus       227 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~----giiHrDlkp~NIll~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          227 MEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK----NVVYRDLKLENLMLDKDGHIKITDFGLCKE  298 (446)
T ss_dssp             ECCCSSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHHT----CCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred             EeeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhcC----CEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence            99999999999994    34679999999999999999999998 7    999999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|||++|+ ||......  .......         .....
T Consensus       299 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~---------~~~~~  367 (446)
T 4ejn_A          299 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELIL---------MEEIR  367 (446)
T ss_dssp             TCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH---------HCCCC
T ss_pred             ccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHH---------hCCCC
Confidence                                       678999999999999999999 88643221  1111111         11111


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCC-----CccccC
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRP-----CMSEVL  376 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl  376 (376)
                       .+......+.+|+.+||+.||.+||     ++.|++
T Consensus       368 -~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell  403 (446)
T 4ejn_A          368 -FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIM  403 (446)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHH
T ss_pred             -CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHH
Confidence             2233345788899999999999999     888764


No 138
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=6.9e-38  Score=295.51  Aligned_cols=215  Identities=13%  Similarity=0.108  Sum_probs=174.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPR  224 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  224 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||+|.+..... +.+.+|+.++..++||||+++++++...+..++||||+.
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCG  107 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCC
Confidence            5678888999999999999999998889999999976554 789999999999999999999999999999999999999


Q ss_pred             CCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------------
Q 044707          225 EGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------------  292 (376)
Q Consensus       225 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------------  292 (376)
                      +|+|.+++.   .....+++..+..++.+++.||.|||+.    +|+|+||||+|||++.++.+||+|            
T Consensus       108 ~~~L~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  180 (314)
T 3com_A          108 AGSVSDIIR---LRNKTLTEDEIATILQSTLKGLEYLHFM----RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA  180 (314)
T ss_dssp             TEEHHHHHH---HHTCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred             CCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhC----CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence            999999985   2346799999999999999999999999    999999999999999999999999            


Q ss_pred             ---------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChHH
Q 044707          293 ---------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMHG  350 (376)
Q Consensus       293 ---------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~  350 (376)
                                           ++.++||||||+++|+|++|+ ||........  .... ..     ...+... .+...
T Consensus       181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~-~~-----~~~~~~~-~~~~~  251 (314)
T 3com_A          181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA--IFMI-PT-----NPPPTFR-KPELW  251 (314)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHH-HH-----SCCCCCS-SGGGS
T ss_pred             ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH--HHHH-hc-----CCCcccC-CcccC
Confidence                                 477899999999999999999 8863322111  1000 00     0011111 22333


Q ss_pred             HHHHHHHHHHccccCCCCCCCccccC
Q 044707          351 IYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       351 ~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...+.+++.+||+.||.+|||+.+|+
T Consensus       252 ~~~l~~li~~~l~~dp~~Rpt~~~ll  277 (314)
T 3com_A          252 SDNFTDFVKQCLVKSPEQRATATQLL  277 (314)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHH
Confidence            46788899999999999999999885


No 139
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=3.8e-38  Score=296.89  Aligned_cols=224  Identities=14%  Similarity=0.095  Sum_probs=173.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC--------HHHHHHHHHHHhcCC---CCCceeeeeeEecCC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS--------SSILEAEKKAAWSMR---HKNILGLLGYHQSDS  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~  214 (376)
                      +++|...++||+|+||+||+|.+..+++.||||++....        ...+.+|+.+++.++   ||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            678999999999999999999998888999999986432        156778888877765   999999999998765


Q ss_pred             -----ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeE
Q 044707          215 -----ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPM  289 (376)
Q Consensus       215 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~k  289 (376)
                           ..++||||+. |+|.+++..  .....+++..+..|+.|++.||+|||+.    +|+||||||+|||++.++.+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~Nil~~~~~~~k  160 (308)
T 3g33_A           88 TDREIKVTLVFEHVD-QDLRTYLDK--APPPGLPAETIKDLMRQFLRGLDFLHAN----CIVHRDLKPENILVTSGGTVK  160 (308)
T ss_dssp             SSSEEEEEEEEECCC-CBHHHHHHT--CCTTCSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCTTTEEECTTSCEE
T ss_pred             CCCceeEEEEehhhh-cCHHHHHhh--ccCCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEcCCCCEE
Confidence                 4799999997 599999975  4445599999999999999999999999    999999999999999999999


Q ss_pred             Ecc--------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhh---
Q 044707          290 RIN--------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQ---  332 (376)
Q Consensus       290 l~D--------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~---  332 (376)
                      |+|                                ++.++|||||||++|||++|+ ||..... .....+......   
T Consensus       161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  240 (308)
T 3g33_A          161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE  240 (308)
T ss_dssp             ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             EeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            999                                688999999999999999999 8763322 211111111100   


Q ss_pred             hhhhhh-------ccccCCC----CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 RKFHEL-------LEEDLDF----SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 ~~~~~~-------~d~~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..+...       +.+....    ...+....+.+++.+||+.||++|||+.|+|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  295 (308)
T 3g33_A          241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL  295 (308)
T ss_dssp             TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHh
Confidence            000000       0000000    1123446788899999999999999999874


No 140
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.8e-38  Score=303.26  Aligned_cols=218  Identities=12%  Similarity=0.098  Sum_probs=174.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHH-HhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKA-AWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....    ..+..|..+ ++.++||||+++++++...+..++||
T Consensus        50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~  129 (340)
T 3an0_A           50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM  129 (340)
T ss_dssp             SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred             hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence            5678888999999999999999988889999999976432    455556655 77789999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+.+ +|.+++.........+++..+..|+.||+.||.|||+..   +|+||||||+|||++.++.+||+|        
T Consensus       130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  205 (340)
T 3an0_A          130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL---SVIHRDVKPSNVLINALGQVKMCDFGISGYLV  205 (340)
T ss_dssp             CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred             HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC---CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence            99975 998887531124568999999999999999999999743   899999999999999999999999        


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccC
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDL  343 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~  343 (376)
                                                  ++.++|||||||++|||++|+ ||......... +......      ..+..
T Consensus       206 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~------~~~~~  278 (340)
T 3an0_A          206 DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ-LKQVVEE------PSPQL  278 (340)
T ss_dssp             CHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH-HHHHHHS------CCCCC
T ss_pred             cccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHH-HHHHhcC------CCCCC
Confidence                                        456899999999999999999 88632222111 1111110      01111


Q ss_pred             CCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          344 DFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       344 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ........+.+++.+||+.||++|||+.+|+
T Consensus       279 --~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  309 (340)
T 3an0_A          279 --PADKFSAEFVDFTSQCLKKNSKERPTYPELM  309 (340)
T ss_dssp             --CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             --CcccCCHHHHHHHHHHccCCcccCcCHHHHh
Confidence              1223456788999999999999999999985


No 141
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=3.2e-38  Score=292.89  Aligned_cols=212  Identities=18%  Similarity=0.248  Sum_probs=172.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+..+ ..||+|.+.....  +.+.+|++++++++||||+++++++. .+..++||||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTT-EEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCC-cEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            35678889999999999999998754 7899999976543  78899999999999999999999976 45689999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      ++|+|.+++..  .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|           
T Consensus        90 ~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T 1qpc_A           90 ENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER----NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (279)
T ss_dssp             TTCBHHHHTTS--HHHHTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             CCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence            99999999953  2223799999999999999999999999    999999999999999999999999           


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                             ++.++||||||++++||++ |+ |+......  +.. .....+     ...   ..+
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~-~~~~~~-----~~~---~~~  232 (279)
T 1qpc_A          164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVI-QNLERG-----YRM---VRP  232 (279)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHH-HHHHTT-----CCC---CCC
T ss_pred             cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHH-HHHhcc-----cCC---CCc
Confidence                                   4568999999999999999 78 77632211  111 111111     011   122


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.+|+
T Consensus       233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~  261 (279)
T 1qpc_A          233 DNCPEELYQLMRLCWKERPEDRPTFDYLR  261 (279)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ccccHHHHHHHHHHhccChhhCCCHHHHH
Confidence            33456788999999999999999998863


No 142
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.6e-38  Score=298.80  Aligned_cols=217  Identities=18%  Similarity=0.203  Sum_probs=173.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEe----cCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQ----SDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~l  218 (376)
                      .++|...+.||+|+||.||++....+++.||||++.....   +.+.+|+.+++.++||||+++++++.    .....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            4568888999999999999999988889999999865443   67889999999999999999999987    3446799


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+.+|+|.+++.........+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK----GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            9999999999999864222457799999999999999999999999    999999999999999999999998      


Q ss_pred             ---------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhh
Q 044707          293 ---------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQ  332 (376)
Q Consensus       293 ---------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~  332 (376)
                                                             ++.++||||||+++|||++|+ ||......          .
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----------~  253 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK----------G  253 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT----------T
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc----------c
Confidence                                                   256899999999999999999 87411000          0


Q ss_pred             hhhhhhccccCC-CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 RKFHELLEEDLD-FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 ~~~~~~~d~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ............ .........+.+++.+||+.||.+|||+.+|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  298 (317)
T 2buj_A          254 DSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL  298 (317)
T ss_dssp             SCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             chhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHH
Confidence            000000000110 01223446788999999999999999999874


No 143
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.3e-38  Score=323.05  Aligned_cols=211  Identities=18%  Similarity=0.209  Sum_probs=174.4

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCC
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPR  224 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  224 (376)
                      ++|...++||+|+||.||+|.+..+ ..||||++.....  +.|.+|+.+|++++|+||+++++++.+ +..+|||||+.
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~  344 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS  344 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTT-EEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             hhhhhheecccCCCeEEEEEEECCC-ceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence            4566678899999999999999875 7799999986543  789999999999999999999999876 67899999999


Q ss_pred             CCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------------
Q 044707          225 EGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------------  292 (376)
Q Consensus       225 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------------  292 (376)
                      +|+|.++|..  .....+++.+++.|+.||+.||.|||+.    +|+||||||+|||++.++.+||+|            
T Consensus       345 ~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          345 KGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERM----NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             TEEHHHHHSH--HHHTTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             CCcHHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence            9999999963  2335699999999999999999999999    999999999999999999999999            


Q ss_pred             ----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCCh
Q 044707          293 ----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDM  348 (376)
Q Consensus       293 ----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~  348 (376)
                                            ++.++|||||||++|||++ |+ ||......  +.. ..+..+.       .+ ..+.
T Consensus       419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~-~~i~~~~-------~~-~~~~  487 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL-DQVERGY-------RM-PCPP  487 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHH-HHHHTTC-------CC-CCCT
T ss_pred             ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH-HHHHcCC-------CC-CCCC
Confidence                                  6779999999999999999 78 87632211  111 1111110       01 1234


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          349 HGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       349 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+...+.+|+.+||+.||++|||+.+|+
T Consensus       488 ~~~~~l~~li~~cl~~dP~~RPt~~~l~  515 (535)
T 2h8h_A          488 ECPESLHDLMCQCWRKEPEERPTFEYLQ  515 (535)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            4556788999999999999999999873


No 144
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=8.3e-39  Score=302.86  Aligned_cols=218  Identities=17%  Similarity=0.185  Sum_probs=177.4

Q ss_pred             HHhcCCCCCceecCCCCEEEEEEEEc-----CCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCC
Q 044707          144 EITDKFTTKALMGECKNYVGYLGYLS-----EYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDS  214 (376)
Q Consensus       144 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  214 (376)
                      ...++|...+.||+|+||.||+|.+.     .+++.||+|.+.....    ..+.+|+.+++.++||||+++++++...+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~  101 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ  101 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence            34677888999999999999999876     3468899999976543    56889999999999999999999999999


Q ss_pred             ceEEEeecCCCCCHhhhcCCCC------CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCe
Q 044707          215 ASVLVYPHPREGTLDNMLCPSP------HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRP  288 (376)
Q Consensus       215 ~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~  288 (376)
                      ..++||||+++|+|.+++....      .....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+
T Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A          102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN----KFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCSGGGEEECTTCCE
T ss_pred             ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC----CCccCCCccceEEEcCCCeE
Confidence            9999999999999999985310      1125679999999999999999999999    99999999999999999999


Q ss_pred             EEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhh
Q 044707          289 MRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLML  331 (376)
Q Consensus       289 kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~  331 (376)
                      ||+|                                   ++.++||||||+++|||++ |. |+......  +.. ....
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~-~~~~  254 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVL-RFVM  254 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHH-HHHH
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHH-HHHH
Confidence            9999                                   6778999999999999999 67 77532211  111 1111


Q ss_pred             hhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          332 QRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       332 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+        .....+......+.+++.+||+.||++|||+.+|+
T Consensus       255 ~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l  291 (322)
T 1p4o_A          255 EG--------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII  291 (322)
T ss_dssp             TT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cC--------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            11        11112334456788899999999999999999874


No 145
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=2.8e-38  Score=301.09  Aligned_cols=207  Identities=14%  Similarity=0.072  Sum_probs=168.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEc---CCcEEEEEEecCCCCH-------HHHHHHHHHHhcCCCCCceeeeeeEecCCc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLS---EYHAFVLVKRFTGDSS-------SILEAEKKAAWSMRHKNILGLLGYHQSDSA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~~-------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  215 (376)
                      .++|...+.||+|+||.||++...   .+++.||+|++.....       ..+.+|+.+++.++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            456888899999999999999984   4678999999976431       557789999999999999999999999999


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---  292 (376)
                      .++||||+++|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|   
T Consensus        96 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~----~ivH~Dlkp~Nill~~~~~~kl~Dfg~  167 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISMALGHLHQK----GIIYRDLKPENIMLNHQGHVKLTDFGL  167 (327)
T ss_dssp             EEEEEECCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred             EEEEEeCCCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhC----CEEcccCCHHHeEECCCCcEEEEeCCc
Confidence            999999999999999994    345789999999999999999999999    999999999999999999999999   


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEE  341 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~  341 (376)
                                                    ++.++|||||||++|||++|+ ||......  .......         ..
T Consensus       168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~---------~~  236 (327)
T 3a62_A          168 CKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KTIDKIL---------KC  236 (327)
T ss_dssp             C----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHH---------HT
T ss_pred             ccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--HHHHHHH---------hC
Confidence                                          677899999999999999999 88743321  1111111         11


Q ss_pred             cCCCCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          342 DLDFSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       342 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                      ... .+......+.+++.+||+.||++||++
T Consensus       237 ~~~-~p~~~~~~~~~li~~~L~~dp~~R~~~  266 (327)
T 3a62_A          237 KLN-LPPYLTQEARDLLKKLLKRNAASRLGA  266 (327)
T ss_dssp             CCC-CCTTSCHHHHHHHHHHSCSCGGGSTTS
T ss_pred             CCC-CCCCCCHHHHHHHHHHHhcCHhhccCC
Confidence            111 223344578888999999999999943


No 146
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=3e-38  Score=300.90  Aligned_cols=211  Identities=15%  Similarity=0.168  Sum_probs=173.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcE----EEEEEecCCCC----HHHHHHHHHHHhcCCCCCceeeeeeEecCCceE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHA----FVLVKRFTGDS----SSILEAEKKAAWSMRHKNILGLLGYHQSDSASV  217 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~----~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  217 (376)
                      .++|...++||+|+||.||+|.+..+++    +||+|.+....    .+.+.+|+.++.+++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            4668888999999999999999876554    46888775432    278899999999999999999999998755 78


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----  292 (376)
                      +|+||+.+|+|.+++..   ....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|     
T Consensus        93 ~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kL~DfG~a~  165 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             EEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred             EEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC----CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence            99999999999999963   346799999999999999999999999    999999999999999999999999     


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChh-hHHHHHHHHhhhhhhhhhc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYR-SLIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~-~l~~~~~~~~~~~~~~~~~  339 (376)
                                                    ++.++|||||||++|||++ |+ ||..... .+...    ...+      
T Consensus       166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~----~~~~------  235 (327)
T 3lzb_A          166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI----LEKG------  235 (327)
T ss_dssp             --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH----HHTT------
T ss_pred             EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH----HHcC------
Confidence                                          5779999999999999999 88 8863322 11111    1111      


Q ss_pred             cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        .....+......+.+++.+||+.||.+|||+.||+
T Consensus       236 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  270 (327)
T 3lzb_A          236 --ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI  270 (327)
T ss_dssp             --CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence              00112334456788999999999999999999874


No 147
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=2.6e-38  Score=304.83  Aligned_cols=207  Identities=16%  Similarity=0.126  Sum_probs=174.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcC-CCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSM-RHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++....      ...+..|..++..+ +||||+++++++.+.+..++
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            577888999999999999999999888999999997542      26678999999988 79999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..    ...+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus        99 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK----GIIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC----CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence            9999999999999943    45799999999999999999999999    999999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|||++|+ ||......  +......         .....
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i~---------~~~~~  239 (353)
T 2i0e_A          171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIM---------EHNVA  239 (353)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH---------HCCCC
T ss_pred             cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--HHHHHHH---------hCCCC
Confidence                                       677999999999999999999 88643321  1111111         11111


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                       .+......+.+++.+||+.||.+||++
T Consensus       240 -~p~~~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          240 -YPKSMSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             -CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence             233345678889999999999999975


No 148
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=2.2e-38  Score=293.22  Aligned_cols=211  Identities=15%  Similarity=0.158  Sum_probs=176.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....      ..+.+|+.+++.++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            4678888999999999999999988789999999865432      5788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++++|.+++..    ...+++..+..++.|++.||.|||+.    +|+|+||||+|||++.++.+||+|       
T Consensus        90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH----CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence            999999999999943    45689999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                .+.++||||||+++++|++|+ |+......  ... .....+         ...
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~-~~~~~~---------~~~  229 (276)
T 2h6d_A          162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLF-KKIRGG---------VFY  229 (276)
T ss_dssp             CC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH-HHHHHC---------CCC
T ss_pred             CCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHH-HHhhcC---------ccc
Confidence                                      146899999999999999999 88643221  111 111111         001


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+......+.+++.+||+.||++|||+.+|+
T Consensus       230 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l  260 (276)
T 2h6d_A          230 IPEYLNRSVATLLMHMLQVDPLKRATIKDIR  260 (276)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CchhcCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            1223345788899999999999999999874


No 149
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2.6e-38  Score=301.35  Aligned_cols=222  Identities=13%  Similarity=0.114  Sum_probs=172.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...++||+|+||.||+|.+..+++.||||++.....     ..+.+|+.++++++||||+++++++...+..++||
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  112 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF  112 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence            5779999999999999999999998889999999975543     45779999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEe-----CCCCeEEcc---
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLR-----HDLRPMRIN---  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~-----~~~~~kl~D---  292 (376)
                      ||+. |+|.+++.    ....+++..+..|+.||+.||.|||+.    +|+||||||+|||++     .++.+||+|   
T Consensus       113 e~~~-~~L~~~~~----~~~~~~~~~~~~i~~ql~~~l~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~  183 (329)
T 3gbz_A          113 EYAE-NDLKKYMD----KNPDVSMRVIKSFLYQLINGVNFCHSR----RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL  183 (329)
T ss_dssp             ECCS-EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred             ecCC-CCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhC----CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence            9998 49999994    345699999999999999999999999    999999999999995     445599999   


Q ss_pred             -------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhh---hhhh
Q 044707          293 -------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQ---RKFH  336 (376)
Q Consensus       293 -------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~---~~~~  336 (376)
                                                     ++.++|||||||++|||++|+ ||..... ............   ..+.
T Consensus       184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP  263 (329)
T ss_dssp             HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence                                           678999999999999999999 7763322 111111111000   0000


Q ss_pred             hhc-----cccCC---C------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELL-----EEDLD---F------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~-----d~~~~---~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...     .....   .      ........+.+|+.+||+.||++|||+.|+|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  317 (329)
T 3gbz_A          264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL  317 (329)
T ss_dssp             TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            000     00000   0      0111345778899999999999999999874


No 150
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=4.1e-38  Score=294.27  Aligned_cols=211  Identities=17%  Similarity=0.189  Sum_probs=170.7

Q ss_pred             hcCCCCCc-eecCCCCEEEEEEEE--cCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceE
Q 044707          146 TDKFTTKA-LMGECKNYVGYLGYL--SEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASV  217 (376)
Q Consensus       146 ~~~f~~~~-~lG~G~fg~Vy~~~~--~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  217 (376)
                      .++|...+ .||+|+||.||+|.+  ..+++.||||++.....     +.+.+|+.+++.++||||+++++++ ..+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            34566666 899999999999965  45568999999976532     6788999999999999999999998 567789


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----  292 (376)
                      +||||+++|+|.+++..    ...+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|     
T Consensus        94 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  165 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSK  165 (291)
T ss_dssp             EEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             EEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC----CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence            99999999999999953    45699999999999999999999999    999999999999999999999999     


Q ss_pred             -------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhc
Q 044707          293 -------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELL  339 (376)
Q Consensus       293 -------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~  339 (376)
                                                     ++.++||||||+++|||++ |+ |+......-   +......+.     
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~~~-----  237 (291)
T 1xbb_A          166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTAMLEKGE-----  237 (291)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHHTTC-----
T ss_pred             eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHcCC-----
Confidence                                           3458999999999999999 88 886332211   111111111     


Q ss_pred             cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          340 EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       340 d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ....+......+.+++.+||+.||++|||+.+|+
T Consensus       238 ---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  271 (291)
T 1xbb_A          238 ---RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE  271 (291)
T ss_dssp             ---CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             ---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence               1112334456788999999999999999999874


No 151
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=5.2e-38  Score=296.63  Aligned_cols=217  Identities=16%  Similarity=0.164  Sum_probs=172.6

Q ss_pred             hcCCCC-CceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTT-KALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~-~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .+.|.. .+.||+|+||.||+|.+..+++.||||++.....   ..+.+|+.++.++ +||||+++++++.+.+..++||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            355666 4789999999999999988889999999975433   7789999999985 7999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC---eEEcc-----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR---PMRIN-----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~---~kl~D-----  292 (376)
                      ||+++|+|.+++..    ...+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.   +||+|     
T Consensus        91 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A           91 EKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             EcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC----CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            99999999999953    45799999999999999999999999    9999999999999998776   89988     


Q ss_pred             ----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhH---------
Q 044707          293 ----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSL---------  322 (376)
Q Consensus       293 ----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l---------  322 (376)
                                                              ++.++|||||||++|||++|+ ||......-         
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  242 (316)
T 2ac3_A          163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC  242 (316)
T ss_dssp             -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred             ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence                                                    245789999999999999999 886321100         


Q ss_pred             ---HHHHHHHhhhhhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          323 ---IEWARPLMLQRKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       323 ---~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ...+......+..      .... ........+.+++.+||+.||++|||+.|++
T Consensus       243 ~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l  294 (316)
T 2ac3_A          243 PACQNMLFESIQEGKY------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL  294 (316)
T ss_dssp             HHHHHHHHHHHHHCCC------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             hhHHHHHHHHHhccCc------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence               0001111111100      0000 0012345788899999999999999999874


No 152
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.1e-37  Score=296.81  Aligned_cols=219  Identities=14%  Similarity=0.086  Sum_probs=178.0

Q ss_pred             HHhcCCCCC-ceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCC-CCCceeeeeeEecCCce
Q 044707          144 EITDKFTTK-ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMR-HKNILGLLGYHQSDSAS  216 (376)
Q Consensus       144 ~~~~~f~~~-~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~  216 (376)
                      ...+.|... +.||+|+||.||+|.+..+++.||+|++.....     ..+.+|+.++..+. ||||+++++++...+..
T Consensus        25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~  104 (327)
T 3lm5_A           25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEI  104 (327)
T ss_dssp             HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeE
Confidence            334556665 789999999999999998889999999875432     77889999999995 69999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC---CCCeEEcc-
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH---DLRPMRIN-  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~---~~~~kl~D-  292 (376)
                      ++||||+.+|+|.+++..  .....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.   ++.+||+| 
T Consensus       105 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH~~----givH~Dikp~NIl~~~~~~~~~~kL~Df  178 (327)
T 3lm5_A          105 ILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLHQN----NIVHLDLKPQNILLSSIYPLGDIKIVDF  178 (327)
T ss_dssp             EEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred             EEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHHC----CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence            999999999999999965  4457799999999999999999999999    9999999999999998   78999999 


Q ss_pred             -------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhcc
Q 044707          293 -------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 -------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                     ++.++||||||+++|||++|+ ||......-  ..... ...    ...
T Consensus       179 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i-~~~----~~~  251 (327)
T 3lm5_A          179 GMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--TYLNI-SQV----NVD  251 (327)
T ss_dssp             GGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH-HHT----CCC
T ss_pred             ccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHH-Hhc----ccc
Confidence                                           678999999999999999999 886433211  11001 000    000


Q ss_pred             ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      . ...........+.+++.+||+.||++|||+.+++
T Consensus       252 ~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll  286 (327)
T 3lm5_A          252 Y-SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICL  286 (327)
T ss_dssp             C-CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             c-CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            0 0112233456788899999999999999999885


No 153
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=4.1e-38  Score=300.28  Aligned_cols=216  Identities=20%  Similarity=0.255  Sum_probs=174.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEc-------CCcEEEEEEecCCCCH----HHHHHHHHHHhcC-CCCCceeeeeeEecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLS-------EYHAFVLVKRFTGDSS----SILEAEKKAAWSM-RHKNILGLLGYHQSD  213 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~~~vavK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  213 (376)
                      .++|...+.||+|+||.||+|.+.       .++..||||++.....    +.+.+|+.+++++ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            466888899999999999999985       2457899999986543    6788999999999 899999999999999


Q ss_pred             CceEEEeecCCCCCHhhhcCCCCC------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEE
Q 044707          214 SASVLVYPHPREGTLDNMLCPSPH------------NELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIF  281 (376)
Q Consensus       214 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NIL  281 (376)
                      +..++||||+.+|+|.+++.....            ....+++..++.++.||+.||.|||+.    +|+||||||+|||
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVL  189 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCccceEE
Confidence            999999999999999999965211            123589999999999999999999999    9999999999999


Q ss_pred             EeCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHH
Q 044707          282 LRHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIE  324 (376)
Q Consensus       282 l~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~  324 (376)
                      ++.++.+||+|                                   ++.++||||||+++|||++ |. |+......  +
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~  267 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E  267 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--H
Confidence            99999999999                                   5678999999999999999 88 87633211  1


Q ss_pred             HHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          325 WARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       325 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .. .....+.        ....+......+.+++.+||+.||.+|||+.+|+
T Consensus       268 ~~-~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  310 (334)
T 2pvf_A          268 LF-KLLKEGH--------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV  310 (334)
T ss_dssp             HH-HHHHHTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HH-HHHhcCC--------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            11 1111111        0112333456788899999999999999999874


No 154
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.1e-38  Score=299.62  Aligned_cols=225  Identities=17%  Similarity=0.186  Sum_probs=171.0

Q ss_pred             HHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--------HHHHHHHHHHhcCCCCCceeeeeeEecCCc
Q 044707          144 EITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--------SILEAEKKAAWSMRHKNILGLLGYHQSDSA  215 (376)
Q Consensus       144 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  215 (376)
                      ...++|...+.||+|+||.||+|.+..+++.||||++.....        +.+.+|+.+++.++||||+++++++...+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            346789999999999999999999988889999999975322        467899999999999999999999999999


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---  292 (376)
                      .++||||+.+ +|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|   
T Consensus        87 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQH----WILHRDLKPNNLLLDENGVLKLADFGL  158 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred             eEEEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC----CEECCCCCHHHEEEcCCCCEEEEeccc
Confidence            9999999986 89998863   345789999999999999999999999    999999999999999999999999   


Q ss_pred             -------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhh---hhhh
Q 044707          293 -------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQ---RKFH  336 (376)
Q Consensus       293 -------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~---~~~~  336 (376)
                                                     ++.++|||||||++|||++|. |+..... .....+......   ..+.
T Consensus       159 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  238 (346)
T 1ua2_A          159 AKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP  238 (346)
T ss_dssp             GSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred             ceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence                                           567899999999999999999 6653221 111111111100   0000


Q ss_pred             hhc---c----ccCCCC-----ChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELL---E----EDLDFS-----DMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~---d----~~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...   +    ......     .......+.+++.+||+.||++|||+.|++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  290 (346)
T 1ua2_A          239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL  290 (346)
T ss_dssp             STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred             hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHh
Confidence            000   0    000000     123346788999999999999999999874


No 155
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.8e-38  Score=311.64  Aligned_cols=220  Identities=10%  Similarity=0.026  Sum_probs=179.1

Q ss_pred             HHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecC
Q 044707          140 EVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSD  213 (376)
Q Consensus       140 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~  213 (376)
                      .++....++|...+.||+|+||.||+|.+..+++.||+|++.....      ..+.+|+.++..++||||++++++|.+.
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            3444556889999999999999999999998889999999865322      4578999999999999999999999999


Q ss_pred             CceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-
Q 044707          214 SASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-  292 (376)
Q Consensus       214 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-  292 (376)
                      +..++||||+++|+|.+++..     ..+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+| 
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~----givHrDLKp~NILl~~~g~ikL~DF  212 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM----GFIHRDVKPDNMLLDKSGHLKLADF  212 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCCHHHeeECCCCCEEEecc
Confidence            999999999999999999953     3589999999999999999999999    999999999999999999999999 


Q ss_pred             -------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhh
Q 044707          293 -------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRK  334 (376)
Q Consensus       293 -------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~  334 (376)
                                                           ++.++|||||||++|||++|+ ||......  .......... 
T Consensus       213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~-  289 (410)
T 3v8s_A          213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKIMNHK-  289 (410)
T ss_dssp             TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTHH-
T ss_pred             ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--hHHHHHHhcc-
Confidence                                                 236899999999999999999 88743321  1111111110 


Q ss_pred             hhhhccccCCCCChHHHHHHHHHHHHccccCCCC--CCCccccC
Q 044707          335 FHELLEEDLDFSDMHGIYRVMAAATQCTISKPTS--RPCMSEVL  376 (376)
Q Consensus       335 ~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl  376 (376)
                      .    ....+ ........+.+|+.+||..+|.+  ||++.||+
T Consensus       290 ~----~~~~p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~  328 (410)
T 3v8s_A          290 N----SLTFP-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIK  328 (410)
T ss_dssp             H----HCCCC-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHH
T ss_pred             c----cccCC-CcccccHHHHHHHHHHccChhhhCCCCCHHHHh
Confidence            0    00111 11123457788889999999988  99998873


No 156
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=5.1e-38  Score=292.65  Aligned_cols=218  Identities=12%  Similarity=0.096  Sum_probs=171.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....     +.+.++...++.++||||+++++++...+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            4678888999999999999999988889999999976533     33445555688889999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||++ |+|.+++.........+++..+..|+.|++.||.|||+..   +|+||||||+|||++.++.+||+|        
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL---SVIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS---CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC---CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            9997 5887776431124568999999999999999999999953   899999999999999999999999        


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccC
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDL  343 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~  343 (376)
                                                  ++.++||||||+++|||++|+ |+........... .....      ..+..
T Consensus       162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~------~~~~~  234 (290)
T 3fme_A          162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK-QVVEE------PSPQL  234 (290)
T ss_dssp             --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH-HHHHS------CCCCC
T ss_pred             ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH-HHhcc------CCCCc
Confidence                                        456899999999999999999 8863222211111 11111      01111


Q ss_pred             CCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          344 DFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       344 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ........+.+++.+||+.||++|||+.||+
T Consensus       235 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l  265 (290)
T 3fme_A          235 --PADKFSAEFVDFTSQCLKKNSKERPTYPELM  265 (290)
T ss_dssp             --CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             --ccccCCHHHHHHHHHHhhcChhhCcCHHHHH
Confidence              1223446788999999999999999999885


No 157
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.6e-37  Score=293.21  Aligned_cols=213  Identities=13%  Similarity=0.090  Sum_probs=176.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....      +.+.+|+.++.+++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            4778999999999999999999988889999999975432      6788999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++++|.+++..    ...+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus       113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA----GATHRDVKPENILVSADDFAYLVDFGIASAT  184 (309)
T ss_dssp             EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred             EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC----cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence            999999999999953    45799999999999999999999999    999999999999999999999999       


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++||||||+++|||++|+ ||.......   ........     . +...
T Consensus       185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~-----~-~~~~  255 (309)
T 2h34_A          185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV---MGAHINQA-----I-PRPS  255 (309)
T ss_dssp             ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH---HHHHHHSC-----C-CCGG
T ss_pred             cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH---HHHHhccC-----C-CCcc
Confidence                                       467899999999999999999 887443321   11111110     0 0000


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCC-Ccccc
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRP-CMSEV  375 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~ev  375 (376)
                      ..+......+.+++.+||+.||++|| ++.++
T Consensus       256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l  287 (309)
T 2h34_A          256 TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDL  287 (309)
T ss_dssp             GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred             ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHH
Confidence            12233345788899999999999999 88775


No 158
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.7e-38  Score=312.06  Aligned_cols=224  Identities=13%  Similarity=0.050  Sum_probs=180.0

Q ss_pred             ccHHHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeE
Q 044707          137 LSWEVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYH  210 (376)
Q Consensus       137 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~  210 (376)
                      +.+.++....++|...+.||+|+||.||+|.++.+++.||||++.....      ..+.+|..++..++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            4555666667899999999999999999999998889999999975322      4478899999999999999999999


Q ss_pred             ecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEE
Q 044707          211 QSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMR  290 (376)
Q Consensus       211 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl  290 (376)
                      .+.+..+|||||+++|+|.+++..   ....+++..+..++.||+.||+|||+.    +|+||||||+|||++.++.+||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~----giiHrDLKp~NILld~~g~vkL  203 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSK---FGERIPAEMARFYLAEIVMAIDSVHRL----GYVHRDIKPDNILLDRCGHIRL  203 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHH---HSSCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEE
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC----CeeecccCHHHeeecCCCCEEE
Confidence            999999999999999999999953   234799999999999999999999999    9999999999999999999999


Q ss_pred             cc-----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHH
Q 044707          291 IN-----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARP  328 (376)
Q Consensus       291 ~D-----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~  328 (376)
                      +|                                         ++.++|||||||++|||++|+ ||......  +....
T Consensus       204 ~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~  281 (412)
T 2vd5_A          204 ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYGK  281 (412)
T ss_dssp             CCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHH
T ss_pred             eechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            99                                         257899999999999999999 88643221  11111


Q ss_pred             HhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCC---CCcccc
Q 044707          329 LMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSR---PCMSEV  375 (376)
Q Consensus       329 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~ev  375 (376)
                      .....   ..  ...+..+.....++.+|+.+||. +|.+|   |++.||
T Consensus       282 i~~~~---~~--~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei  325 (412)
T 2vd5_A          282 IVHYK---EH--LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDF  325 (412)
T ss_dssp             HHTHH---HH--CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHH
T ss_pred             HHhcc---cC--cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH
Confidence            11100   00  01111122334578888899999 99998   578776


No 159
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=1.3e-38  Score=303.01  Aligned_cols=217  Identities=16%  Similarity=0.170  Sum_probs=175.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCc-----EEEEEEecCCCCH----HHHHHHHHHHhcC-CCCCceeeeeeEecCCc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYH-----AFVLVKRFTGDSS----SILEAEKKAAWSM-RHKNILGLLGYHQSDSA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~-----~~vavK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~  215 (376)
                      .++|...+.||+|+||.||+|.+..++     ..||+|.+.....    +.+.+|+.++..+ +||||+++++++...+.
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  124 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP  124 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence            467888899999999999999986543     4799999976542    6788999999999 89999999999999999


Q ss_pred             eEEEeecCCCCCHhhhcCCCC----------CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC
Q 044707          216 SVLVYPHPREGTLDNMLCPSP----------HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD  285 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~----------~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~  285 (376)
                      .++||||+++|+|.+++....          .....+++..++.++.|++.||.|||+.    +|+||||||+|||++.+
T Consensus       125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNG  200 (333)
T ss_dssp             CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGCEEEGG
T ss_pred             eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC----CcccCCcccceEEECCC
Confidence            999999999999999985310          0135689999999999999999999999    99999999999999999


Q ss_pred             CCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHH
Q 044707          286 LRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARP  328 (376)
Q Consensus       286 ~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~  328 (376)
                      +.+||+|                                   ++.++||||||+++|||+| |. |+......-  ....
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~  278 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFYK  278 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHHH
T ss_pred             CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHHH
Confidence            9999999                                   6778999999999999999 77 776322110  0111


Q ss_pred             HhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          329 LMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       329 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ....+     ....   .+......+.+++.+||+.||.+|||+.+|+
T Consensus       279 ~~~~~-----~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~  318 (333)
T 2i1m_A          279 LVKDG-----YQMA---QPAFAPKNIYSIMQACWALEPTHRPTFQQIC  318 (333)
T ss_dssp             HHHHT-----CCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHhcC-----CCCC---CCCCCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence            11111     1111   1223345788899999999999999999874


No 160
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-37  Score=290.89  Aligned_cols=210  Identities=15%  Similarity=0.172  Sum_probs=171.1

Q ss_pred             cCCCCCc-eecCCCCEEEEEEEEc--CCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          147 DKFTTKA-LMGECKNYVGYLGYLS--EYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       147 ~~f~~~~-~lG~G~fg~Vy~~~~~--~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      ++|...+ .||+|+||.||+|.+.  .++..||+|++.....    +.+.+|+.++.+++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            3444444 8999999999999864  3468899999987432    6788999999999999999999998 55678999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++.   .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus        88 ~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           88 MEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             EECCTTEEHHHHHT---TCTTTSCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEeCCCCCHHHHHH---hCCccCCHHHHHHHHHHHHHHHHHHHHC----CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            99999999999996   3346799999999999999999999999    999999999999999999999999       


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChh-hHHHHHHHHhhhhhhhhhcc
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYR-SLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~-~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                   ++.++||||||+++|||++ |+ ||..... .+..    ....+.      
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~----~i~~~~------  230 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA----FIEQGK------  230 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH----HHHTTC------
T ss_pred             ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH----HHhcCC------
Confidence                                         4568999999999999998 88 8863222 1111    111111      


Q ss_pred             ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ....+......+.+++..||+.||++||++.+|+
T Consensus       231 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~  264 (287)
T 1u59_A          231 --RMECPPECPPELYALMSDCWIYKWEDRPDFLTVE  264 (287)
T ss_dssp             --CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred             --cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence              1112344556888999999999999999999874


No 161
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=4.6e-38  Score=292.20  Aligned_cols=213  Identities=18%  Similarity=0.164  Sum_probs=175.7

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC---------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceE
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS---------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASV  217 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  217 (376)
                      ++|...+.||+|+||.||+|.+..+++.||+|++....         .+.+.+|+.++++++||||+++++++...+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            56888899999999999999999888999999986542         277899999999999999999999999999999


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC----CeEEcc-
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL----RPMRIN-  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~----~~kl~D-  292 (376)
                      +||||+++++|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+||+++.++    .+||+| 
T Consensus        85 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~~~~kl~df  156 (283)
T 3bhy_A           85 LILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHSK----RIAHFDLKPENIMLLDKNVPNPRIKLIDF  156 (283)
T ss_dssp             EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEeecCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCChHHEEEecCCCCCCceEEEec
Confidence            9999999999999994    345799999999999999999999999    999999999999998877    789999 


Q ss_pred             -------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhcc
Q 044707          293 -------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 -------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                     ++.++||||||+++|+|++|+ |+......  +... ......      
T Consensus       157 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~-~~~~~~------  227 (283)
T 3bhy_A          157 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLT-NISAVN------  227 (283)
T ss_dssp             TTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH-HHHTTC------
T ss_pred             ccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHH-HhHhcc------
Confidence                                           567899999999999999999 88643221  1111 111100      


Q ss_pred             ccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..... ........+.+++.+||+.||++|||+.+++
T Consensus       228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l  264 (283)
T 3bhy_A          228 YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL  264 (283)
T ss_dssp             CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHH
Confidence            00000 1122345688899999999999999999874


No 162
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=4e-38  Score=294.99  Aligned_cols=223  Identities=17%  Similarity=0.149  Sum_probs=163.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....    +.+.+|+.++.+++||||+++++++...+..++|||
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   93 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK   93 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence            5678889999999999999999877778999999875432    677899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCC----CCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----
Q 044707          222 HPREGTLDNMLCPS----PHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----  292 (376)
                      |+++|+|.+++...    ......+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|     
T Consensus        94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN----GQIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC----CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            99999999998520    01346799999999999999999999999    999999999999999999999998     


Q ss_pred             ----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhhhhhh
Q 044707          293 ----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQRKFH  336 (376)
Q Consensus       293 ----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~~~~~  336 (376)
                                                        ++.++||||||+++|||++|+ ||..... ....   .... +...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~-~~~~  245 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM---LTLQ-NDPP  245 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH---HHHT-SSCC
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH---HHhc-cCCC
Confidence                                              577899999999999999999 8863322 1111   0111 0000


Q ss_pred             hhccc-cCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELLEE-DLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~d~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..... ............+.+++.+||+.||.+|||+.+|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  286 (303)
T 2vwi_A          246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL  286 (303)
T ss_dssp             CTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             ccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHh
Confidence            00000 00001223345788899999999999999999874


No 163
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=1.2e-37  Score=294.04  Aligned_cols=215  Identities=21%  Similarity=0.272  Sum_probs=169.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcC---CcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCc--
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSE---YHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSA--  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--  215 (376)
                      .++|...+.||+|+||.||+|.+..   ++..||+|.+.....     +.+.+|+.++++++||||+++++++...+.  
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            5667888999999999999998764   456899999975432     668899999999999999999999887553  


Q ss_pred             ---eEEEeecCCCCCHhhhcCCCC--CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEE
Q 044707          216 ---SVLVYPHPREGTLDNMLCPSP--HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMR  290 (376)
Q Consensus       216 ---~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl  290 (376)
                         .++||||+.+|+|.+++....  .....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dikp~NIli~~~~~~kl  188 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR----NFLHRDLAARNCMLRDDMTVCV  188 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT----TCCCCCCSGGGEEECTTSCEEE
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCcceEEEcCCCcEEE
Confidence               499999999999999984211  2346799999999999999999999999    9999999999999999999999


Q ss_pred             cc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcCh-hhHHHHHHHHhhh
Q 044707          291 IN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDY-RSLIEWARPLMLQ  332 (376)
Q Consensus       291 ~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~-~~l~~~~~~~~~~  332 (376)
                      +|                                   ++.++||||||+++|||++ |. |+.... ..+...    .. 
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~----~~-  263 (313)
T 3brb_A          189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY----LL-  263 (313)
T ss_dssp             CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH----HH-
T ss_pred             eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH----HH-
Confidence            99                                   5678999999999999999 77 775322 111111    11 


Q ss_pred             hhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 RKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                             .......+......+.+++.+||+.||++|||+.+|+
T Consensus       264 -------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  300 (313)
T 3brb_A          264 -------HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLR  300 (313)
T ss_dssp             -------TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred             -------cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence                   1111112334456788999999999999999999874


No 164
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1e-37  Score=292.09  Aligned_cols=221  Identities=15%  Similarity=0.140  Sum_probs=174.8

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEee
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  221 (376)
                      ++|...+.||+|+||.||+|.+..+++.||+|++.....     ..+.+|+.++++++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            578888999999999999999988889999999875432     678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---------
Q 044707          222 HPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---------  292 (376)
Q Consensus       222 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---------  292 (376)
                      |+. |+|.+++..  .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|         
T Consensus        83 ~~~-~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  155 (299)
T 2r3i_A           83 FLH-QDLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  155 (299)
T ss_dssp             CCS-EEHHHHHHH--TTTTCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ccc-CCHHHHHHh--hhccCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence            998 699999965  3345789999999999999999999999    999999999999999999999999         


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhh-hhhhh--------
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQ-RKFHE--------  337 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~-~~~~~--------  337 (376)
                                               ++.++||||||+++|+|++|+ ||......  +........ +....        
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  233 (299)
T 2r3i_A          156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTS  233 (299)
T ss_dssp             CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCCCchhhhhHhhc
Confidence                                     467899999999999999999 88643221  111111110 00000        


Q ss_pred             --hccccCCC--------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          338 --LLEEDLDF--------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       338 --~~d~~~~~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ...+....        ........+.+++.+||+.||++|||+.+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l  282 (299)
T 2r3i_A          234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL  282 (299)
T ss_dssp             STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence              00001100        0112346788899999999999999999874


No 165
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-38  Score=301.78  Aligned_cols=219  Identities=14%  Similarity=0.145  Sum_probs=178.7

Q ss_pred             HHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcC-CCCCceeeeeeEec------
Q 044707          142 IMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSM-RHKNILGLLGYHQS------  212 (376)
Q Consensus       142 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l-~h~nIv~l~~~~~~------  212 (376)
                      +....++|...+.||+|+||.||+|.+..+++.||||++.....  ..+.+|+.++.++ +||||+++++++..      
T Consensus        19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~   98 (326)
T 2x7f_A           19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   98 (326)
T ss_dssp             CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred             ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence            33447789999999999999999999988889999999865433  7889999999998 79999999999987      


Q ss_pred             CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          213 DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       213 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                      .+..++||||+.+|+|.+++..  .....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~kl~D  172 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKN--TKGNTLKEEWIAYICREILRGLSHLHQH----KVIHRDIKGQNVLLTENAEVKLVD  172 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHH--SGGGCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTCCEEECC
T ss_pred             cceEEEEEEcCCCCcHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCcHHHEEEcCCCCEEEee
Confidence            4678999999999999999964  3346799999999999999999999999    999999999999999999999999


Q ss_pred             --------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhh
Q 044707          293 --------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQR  333 (376)
Q Consensus       293 --------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~  333 (376)
                                                            ++.++|||||||++|+|++|+ |+......-  ...... ..
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~-~~  249 (326)
T 2x7f_A          173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFLIP-RN  249 (326)
T ss_dssp             CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH-HS
T ss_pred             CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHhh-cC
Confidence                                                  456799999999999999999 886332211  111111 10


Q ss_pred             hhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 KFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                           ..+..  ........+.+++.+||..||.+|||+.+|+
T Consensus       250 -----~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  285 (326)
T 2x7f_A          250 -----PAPRL--KSKKWSKKFQSFIESCLVKNHSQRPATEQLM  285 (326)
T ss_dssp             -----CCCCC--SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             -----ccccC--CccccCHHHHHHHHHHhccChhhCCCHHHHh
Confidence                 01111  1222345788899999999999999999874


No 166
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2.2e-37  Score=289.71  Aligned_cols=215  Identities=16%  Similarity=0.151  Sum_probs=177.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------------HHHHHHHHHHHhcCC-CCCceeeeeeEec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------------SSILEAEKKAAWSMR-HKNILGLLGYHQS  212 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------------~~~~~~E~~~l~~l~-h~nIv~l~~~~~~  212 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++....            .+.+.+|+.++.++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            567888999999999999999999888999999997543            156789999999996 9999999999999


Q ss_pred             CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          213 DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       213 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                      .+..++||||+++|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~d  167 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVICALHKL----NIVHRDLKPENILLDDDMNIKLTD  167 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECC
T ss_pred             CCeEEEEEeccCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCcceEEEcCCCcEEEec
Confidence            999999999999999999994    346799999999999999999999999    999999999999999999999999


Q ss_pred             --------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhh
Q 044707          293 --------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQR  333 (376)
Q Consensus       293 --------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~  333 (376)
                                                            ++.++||||||++++||++|+ |+......  ... .....+
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~-~~~~~~  244 (298)
T 1phk_A          168 FGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LML-RMIMSG  244 (298)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH-HHHHHT
T ss_pred             ccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHH-HHHhcC
Confidence                                                  245899999999999999999 88633221  111 111111


Q ss_pred             hhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 KFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..    .... .........+.+++.+||+.||++|||+.+|+
T Consensus       245 ~~----~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  282 (298)
T 1phk_A          245 NY----QFGS-PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEAL  282 (298)
T ss_dssp             CC----CCCT-TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHT
T ss_pred             Cc----ccCc-ccccccCHHHHHHHHHHccCCcccCCCHHHHH
Confidence            10    0000 01233456788999999999999999999875


No 167
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=9e-38  Score=293.76  Aligned_cols=215  Identities=16%  Similarity=0.151  Sum_probs=176.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      .++|...+.||+|+||.||+|....+++.||+|++.....   ..+.+|+.++..++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            4568888999999999999999988889999999976543   6688999999999999999999999999999999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE---eCCCCeEEcc-------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL---RHDLRPMRIN-------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl---~~~~~~kl~D-------  292 (376)
                      +++|+|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||+   +.++.+||+|       
T Consensus        88 ~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~  159 (304)
T 2jam_A           88 VSGGELFDRIL----ERGVYTEKDASLVIQQVLSAVKYLHEN----GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME  159 (304)
T ss_dssp             CCSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred             CCCccHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence            99999999984    345799999999999999999999999    99999999999999   7888999999       


Q ss_pred             ------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 ------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 ------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                              ++.++||||||+++|||++|+ ||......  ... ..+..+..    .. .....
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~-~~i~~~~~----~~-~~~~~  231 (304)
T 2jam_A          160 QNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLF-EKIKEGYY----EF-ESPFW  231 (304)
T ss_dssp             CCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHH-HHHHHCCC----CC-CTTTT
T ss_pred             CCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHH-HHHHcCCC----CC-Ccccc
Confidence                                    567899999999999999999 88633221  111 11111110    00 00122


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......+.+++.+||+.||++|||+.+++
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l  260 (304)
T 2jam_A          232 DDISESAKDFICHLLEKDPNERYTCEKAL  260 (304)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            33446788899999999999999999874


No 168
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.3e-37  Score=291.49  Aligned_cols=211  Identities=21%  Similarity=0.266  Sum_probs=169.1

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCC---cEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEe-cCCceEE
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEY---HAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQ-SDSASVL  218 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~l  218 (376)
                      ..|...+.||+|+||.||+|.+..+   ...+|+|.+.....    +.+.+|+.++++++||||+++++++. ..+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            4477778999999999999997543   34699999876443    67889999999999999999999864 4567899


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+.+|+|.+++.   .....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       105 v~e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~ql~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          105 VLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARD  177 (298)
T ss_dssp             EEECCTTCBHHHHHH---CTTCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred             EEeCCCCCCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCchheEEECCCCCEEECccccccc
Confidence            999999999999996   3456789999999999999999999999    999999999999999999999999      


Q ss_pred             -------------------------------CCCcchhhhHHHHHHHHHhCC-CCC-cCh-hhHHHHHHHHhhhhhhhhh
Q 044707          293 -------------------------------AITKIRCLLFGVLLLRLFCRR-SMP-QDY-RSLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       293 -------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~-~~~-~~l~~~~~~~~~~~~~~~~  338 (376)
                                                     ++.++||||||+++|||++|. |+. ... .......    ..+     
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~----~~~-----  248 (298)
T 3f66_A          178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----LQG-----  248 (298)
T ss_dssp             CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH----HTT-----
T ss_pred             ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH----hcC-----
Confidence                                           577899999999999999966 443 221 1111111    010     


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         .....+......+.+++.+||+.||++|||+.+|+
T Consensus       249 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell  283 (298)
T 3f66_A          249 ---RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV  283 (298)
T ss_dssp             ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ---CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence               11112233445788899999999999999999874


No 169
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=9.5e-38  Score=296.13  Aligned_cols=213  Identities=15%  Similarity=0.182  Sum_probs=171.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----------HHHHHHHHHHhcCCCCCceeeeeeEecCC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----------SILEAEKKAAWSMRHKNILGLLGYHQSDS  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  214 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....           ..+.+|+.++++++||||+++++++...+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            4678889999999999999999998889999999875421           35789999999999999999999987655


Q ss_pred             ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC---eEEc
Q 044707          215 ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR---PMRI  291 (376)
Q Consensus       215 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~---~kl~  291 (376)
                       .++||||+++|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.   +||+
T Consensus        89 -~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~~~~kl~  159 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIKIT  159 (322)
T ss_dssp             -EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred             -eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCCHHHEEEecCCCCCeEEEc
Confidence             899999999999999994    356799999999999999999999999    9999999999999987665   9999


Q ss_pred             c-----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh--hHHHHHHHHhhhh
Q 044707          292 N-----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR--SLIEWARPLMLQR  333 (376)
Q Consensus       292 D-----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~--~l~~~~~~~~~~~  333 (376)
                      |                                   ++.++|||||||++|+|++|. ||.....  .+...+    ..+
T Consensus       160 Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~----~~~  235 (322)
T 2ycf_A          160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI----TSG  235 (322)
T ss_dssp             CCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHH----HHT
T ss_pred             cCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHH----HhC
Confidence            9                                   467899999999999999999 8863221  221111    111


Q ss_pred             hhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 KFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ... .    ...........+.+++.+||+.||++|||+.+++
T Consensus       236 ~~~-~----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l  273 (322)
T 2ycf_A          236 KYN-F----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL  273 (322)
T ss_dssp             CCC-C----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             ccc-c----CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHh
Confidence            100 0    0001122345788899999999999999999874


No 170
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=3.4e-38  Score=292.75  Aligned_cols=211  Identities=19%  Similarity=0.233  Sum_probs=172.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCceeeeeeEecC-CceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNILGLLGYHQSD-SASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+.  ++.||||++..... +.+.+|+.++.+++||||+++++++... +..++||||+
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   97 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   97 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence            466888899999999999999886  68999999987654 7889999999999999999999987654 4689999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-----------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-----------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-----------  292 (376)
                      ++|+|.+++..  .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|           
T Consensus        98 ~~~~L~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  171 (278)
T 1byg_A           98 AKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  171 (278)
T ss_dssp             TTEEHHHHHHH--HHHHHCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             CCCCHHHHHHh--cccccCCHHHHHHHHHHHHHHHHHHHhC----CccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence            99999999953  2223489999999999999999999999    999999999999999999999999           


Q ss_pred             -------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChh-hHHHHHHHHhhhhhhhhhccccCCCCChHH
Q 044707          293 -------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYR-SLIEWARPLMLQRKFHELLEEDLDFSDMHG  350 (376)
Q Consensus       293 -------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~-~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~  350 (376)
                                         ++.++||||||+++|||++ |+ |+..... .+.    .....+     ...   ..+...
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~----~~~~~~-----~~~---~~~~~~  239 (278)
T 1byg_A          172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV----PRVEKG-----YKM---DAPDGC  239 (278)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH----HHHTTT-----CCC---CCCTTC
T ss_pred             cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHHhcC-----CCC---CCcccC
Confidence                               5778999999999999998 88 8763321 111    111111     111   123344


Q ss_pred             HHHHHHHHHHccccCCCCCCCccccC
Q 044707          351 IYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       351 ~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...+.+++.+||+.||++|||+.+|+
T Consensus       240 ~~~l~~li~~~l~~~p~~Rps~~~l~  265 (278)
T 1byg_A          240 PPAVYEVMKNCWHLDAAMRPSFLQLR  265 (278)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHH
Confidence            56788899999999999999998874


No 171
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=3.4e-38  Score=298.95  Aligned_cols=219  Identities=21%  Similarity=0.217  Sum_probs=173.6

Q ss_pred             CCCCceecCCCCEEEEEEEEc----CCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecC--CceEE
Q 044707          149 FTTKALMGECKNYVGYLGYLS----EYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSD--SASVL  218 (376)
Q Consensus       149 f~~~~~lG~G~fg~Vy~~~~~----~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l  218 (376)
                      |...+.||+|+||.||++.+.    .+++.||||++.....    +.+.+|+.++++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            477889999999999988753    3568999999986543    6688999999999999999999999874  56799


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..     ..+++..++.|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       113 v~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ----HYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             EECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCchheEEEcCCCCEEECCcccccc
Confidence            9999999999999964     3499999999999999999999999    999999999999999999999999      


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHH---HHHhhhhhhhhh
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWA---RPLMLQRKFHEL  338 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~---~~~~~~~~~~~~  338 (376)
                                                    ++.++||||||+++|||++|. |+.........+.   ........+...
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL  263 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred             ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence                                          455889999999999999999 7753222111110   000011112222


Q ss_pred             ccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          339 LEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       339 ~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +...... .+......+.+|+.+||+.||++|||+.+|+
T Consensus       264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  302 (318)
T 3lxp_A          264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI  302 (318)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            2222111 3445567889999999999999999999874


No 172
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=5.7e-38  Score=318.90  Aligned_cols=215  Identities=15%  Similarity=0.114  Sum_probs=177.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++....      ...+.+|+.+|..++||||+++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            467888899999999999999999888999999986432      25678999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++..  .....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|       
T Consensus       263 mEy~~gg~L~~~l~~--~~~~~l~e~~~~~i~~qIl~aL~yLH~~----gIvHrDLKPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          263 LTLMNGGDLKFHIYH--MGQAGFPEARAVFYAAEICCGLEDLHRE----RIVYRDLKPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             ECCCCSCBHHHHHHS--SSSCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEcCCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHC----CEeccCCchheEEEeCCCCeEEEecccceec
Confidence            999999999999965  3345699999999999999999999999    999999999999999999999999       


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhh-HHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRS-LIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~-l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                               ++.++|||||||++|||++|+ ||...... ....+.......      ...   
T Consensus       337 ~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~------~~~---  407 (576)
T 2acx_A          337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV------PEE---  407 (576)
T ss_dssp             CTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC------CCC---
T ss_pred             ccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc------ccc---
Confidence                                     678999999999999999999 88743211 001111111110      111   


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCC-----Ccccc
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRP-----CMSEV  375 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev  375 (376)
                      .+......+.+|+.+||+.||.+||     ++.||
T Consensus       408 ~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~ei  442 (576)
T 2acx_A          408 YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREV  442 (576)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHH
T ss_pred             CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHH
Confidence            2233446788889999999999999     55665


No 173
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=1e-37  Score=292.92  Aligned_cols=212  Identities=16%  Similarity=0.090  Sum_probs=172.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC-------HHHHHHHHHHHhcCCCCCceeeeeeEe--cCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS-------SSILEAEKKAAWSMRHKNILGLLGYHQ--SDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++....       ...+.+|+.+++.++|+||+++++++.  +.+..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            478999999999999999999998888999999997542       267889999999999999999999984  45678


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ++||||+.+| |.+++..  .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|    
T Consensus        84 ~lv~e~~~~~-l~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~LH~~----~i~H~dlkp~NIl~~~~~~~kl~dfg~~  156 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDS--VPEKRFPVCQAHGYFCQLIDGLEYLHSQ----GIVHKDIKPGNLLLTTGGTLKISALGVA  156 (305)
T ss_dssp             EEEEECCSEE-HHHHHHH--STTCSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EEEehhccCC-HHHHHHh--CcccccCHHHHHHHHHHHHHHHHHHHHC----CeeecCCCcccEEEcCCCcEEeeccccc
Confidence            9999999876 7777754  3456799999999999999999999999    999999999999999999999998    


Q ss_pred             ---------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhh
Q 044707          293 ---------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       293 ---------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~  338 (376)
                                                       .+.++||||||+++|||++|+ |+......  ... ..+..+.    
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~-~~i~~~~----  229 (305)
T 2wtk_C          157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLF-ENIGKGS----  229 (305)
T ss_dssp             EECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHH-HHHHHCC----
T ss_pred             cccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHH-HHHhcCC----
Confidence                                             145899999999999999999 88743321  111 1111110    


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                          . ..+......+.+++.+||+.||++|||+.+|+
T Consensus       230 ----~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  262 (305)
T 2wtk_C          230 ----Y-AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIR  262 (305)
T ss_dssp             ----C-CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             ----C-CCCCccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence                1 12233445788899999999999999999874


No 174
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.6e-38  Score=297.47  Aligned_cols=224  Identities=17%  Similarity=0.180  Sum_probs=174.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEE----cCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEecCC--ce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYL----SEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQSDS--AS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~----~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~  216 (376)
                      .++|...+.||+|+||.||+|.+    ..+++.||||++.....   +.+.+|+.++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35577789999999999999985    44679999999976543   67889999999999999999999987654  67


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ++||||+++|+|.+++..   ....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||+|    
T Consensus       120 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dikp~NIli~~~~~~kL~Dfg~~  192 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLT  192 (326)
T ss_dssp             EEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC----CEeccCCCcceEEEcCCCcEEEecCcch
Confidence            999999999999999963   335699999999999999999999999    999999999999999999999999    


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHH----hhhhhh
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPL----MLQRKF  335 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~----~~~~~~  335 (376)
                                                      ++.++||||||++++||++|. |+......+.......    .....+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 2w1i_A          193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL  272 (326)
T ss_dssp             EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred             hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence                                            356899999999999999999 6642211111110000    000011


Q ss_pred             hhhccccCC-CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          336 HELLEEDLD-FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       336 ~~~~d~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...+..... ..+......+.+++.+||+.||++|||+.+|+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~  314 (326)
T 2w1i_A          273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA  314 (326)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            111111111 12344556888999999999999999999874


No 175
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=9e-38  Score=312.89  Aligned_cols=215  Identities=17%  Similarity=0.154  Sum_probs=178.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||||++....      ...+.+|+.++++++||||+++++++...+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            456888899999999999999999888999999985432      27789999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE---eCCCCeEEcc----
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL---RHDLRPMRIN----  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl---~~~~~~kl~D----  292 (376)
                      |||+.+|+|.+++.    ....+++..+..|+.||+.||.|||+.    +|+||||||+|||+   +.++.+||+|    
T Consensus       105 ~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A          105 GEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             ECCCCSCBHHHHHH----TCSCCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             EecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            99999999999994    346799999999999999999999999    99999999999999   5678899999    


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|+|++|. ||......  +... .+..+..    ....+
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~-~i~~~~~----~~~~~  249 (484)
T 3nyv_A          177 THFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILK-KVEKGKY----TFELP  249 (484)
T ss_dssp             HHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-HHHHCCC----CCCSG
T ss_pred             EEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHH-HHHcCCC----CCCCc
Confidence                                       678999999999999999999 88643321  1111 1111111    00000


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       ........+.+++.+||+.||.+|||+.|+|
T Consensus       250 -~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l  280 (484)
T 3nyv_A          250 -QWKKVSESAKDLIRKMLTYVPSMRISARDAL  280 (484)
T ss_dssp             -GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -ccccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence             1233456788899999999999999999874


No 176
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.8e-37  Score=294.54  Aligned_cols=218  Identities=17%  Similarity=0.231  Sum_probs=177.2

Q ss_pred             HHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhc--CCCCCceeeeeeEecCC----ce
Q 044707          143 MEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWS--MRHKNILGLLGYHQSDS----AS  216 (376)
Q Consensus       143 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~  216 (376)
                      ....++|...+.||+|+||.||+|.+.  ++.||||++.......+.+|.+++..  ++||||+++++++....    ..
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~  115 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL  115 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence            344677999999999999999999985  68999999987766788889998887  78999999999998876    78


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCCCeeecCCCCCcEEEeCCCCe
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMH--------QECPRGPIAHGELQLHNIFLRHDLRP  288 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH--------~~~~~~~iiH~Dlkp~NILl~~~~~~  288 (376)
                      ++||||+++|+|.+++..     ..+++..++.++.|++.||.|||        +.    +|+||||||+|||++.++.+
T Consensus       116 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~----~ivH~Dlkp~NIll~~~~~~  186 (342)
T 1b6c_B          116 WLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP----AIAHRDLKSKNILVKKNGTC  186 (342)
T ss_dssp             EEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC----EEECSCCSGGGEEECTTSCE
T ss_pred             EEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC----CeeeCCCCHHHEEECCCCCE
Confidence            999999999999999953     36899999999999999999999        77    99999999999999999999


Q ss_pred             EEccC-------------------------------------------CCcchhhhHHHHHHHHHhC----------C-C
Q 044707          289 MRINA-------------------------------------------ITKIRCLLFGVLLLRLFCR----------R-S  314 (376)
Q Consensus       289 kl~D~-------------------------------------------~~~~Dv~S~Gvvl~elltg----------~-P  314 (376)
                      ||+|+                                           +.++|||||||++|||++|          . |
T Consensus       187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p  266 (342)
T 1b6c_B          187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP  266 (342)
T ss_dssp             EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence            99990                                           0479999999999999999          6 6


Q ss_pred             CCcC---hhhHHHHHHHHhhhhhhhhhccccCCC--CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          315 MPQD---YRSLIEWARPLMLQRKFHELLEEDLDF--SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       315 ~~~~---~~~l~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      |...   ......+.. ...    .....+.+..  ....+...+.+|+.+||+.||++|||+.+|+
T Consensus       267 ~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~  328 (342)
T 1b6c_B          267 YYDLVPSDPSVEEMRK-VVC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK  328 (342)
T ss_dssp             TTTTSCSSCCHHHHHH-HHT----TSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             ccccCcCcccHHHHHH-HHH----HHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHH
Confidence            6522   111111111 111    1112222221  2346778899999999999999999999874


No 177
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-37  Score=303.44  Aligned_cols=224  Identities=13%  Similarity=0.089  Sum_probs=176.8

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCC--ceEEEe
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDS--ASVLVY  220 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lv~  220 (376)
                      +.|...++||+|+||.||+|.+..+++.||||++.....    +.+.+|++++++++||||+++++++...+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            568888999999999999999998889999999975432    77889999999999999999999988755  679999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE----eCCCCeEEcc----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL----RHDLRPMRIN----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl----~~~~~~kl~D----  292 (376)
                      ||+++|+|.+++... .....+++..++.|+.|++.||.|||+.    +|+||||||+|||+    +.++.+||+|    
T Consensus        89 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           89 EFCPCGSLYTVLEEP-SNAYGLPESEFLIVLRDVVGGMNHLREN----GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             CCCTTEEHHHHTTSG-GGTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred             ecCCCCCHHHHHHhh-hcccCCCHHHHHHHHHHHHHHHHHHHHC----CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence            999999999999642 2223499999999999999999999999    99999999999999    7777899999    


Q ss_pred             ------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcC--hhhHHHHHHHHhhhh
Q 044707          293 ------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQD--YRSLIEWARPLMLQR  333 (376)
Q Consensus       293 ------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~--~~~l~~~~~~~~~~~  333 (376)
                                                          ++.++|||||||++|||++|+ ||...  .....+.+.......
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~  243 (396)
T 4eut_A          164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (396)
T ss_dssp             EECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred             eEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence                                                134789999999999999999 88521  111112222221110


Q ss_pred             ---hhhhh---------ccccCC---CCChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          334 ---KFHEL---------LEEDLD---FSDMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       334 ---~~~~~---------~d~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                         .+...         ....+.   .........+.+++..||+.||++|||+.++
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~  300 (396)
T 4eut_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF  300 (396)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred             CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHH
Confidence               00000         000111   1346677788899999999999999999886


No 178
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.3e-38  Score=303.44  Aligned_cols=209  Identities=21%  Similarity=0.301  Sum_probs=168.9

Q ss_pred             CCCCceecCCCCEEEEEEEEcCC---cEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEec-CCceEEEe
Q 044707          149 FTTKALMGECKNYVGYLGYLSEY---HAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQS-DSASVLVY  220 (376)
Q Consensus       149 f~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lv~  220 (376)
                      |...+.||+|+||.||+|.+..+   +..||+|.+.....    +.+.+|+.++++++||||+++++++.. .+..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            55668899999999999997532   35699999875432    778999999999999999999998754 55789999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+++|+|.+++.   .....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|        
T Consensus       171 e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          171 PYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             ECCTTCBHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             ECCCCCCHHHHHh---hcccCCCHHHHHHHHHHHHHHHHHHHHC----CEecCccchheEEECCCCCEEEeecccccccc
Confidence            9999999999996   3446789999999999999999999999    999999999999999999999999        


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhC-C-CCCcC-hhhHHHHHHHHhhhhhhhhhcc
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCR-R-SMPQD-YRSLIEWARPLMLQRKFHELLE  340 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg-~-P~~~~-~~~l~~~~~~~~~~~~~~~~~d  340 (376)
                                                   ++.++|||||||++|||++| . |+... ...+...    ...+.      
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~----~~~~~------  313 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY----LLQGR------  313 (373)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH----HHTTC------
T ss_pred             ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH----HHcCC------
Confidence                                         67799999999999999995 4 55422 1121111    11110      


Q ss_pred             ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ....+..+...+.+++.+||+.||++|||+.+|+
T Consensus       314 --~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell  347 (373)
T 3c1x_A          314 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV  347 (373)
T ss_dssp             --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence              0112333456788999999999999999999874


No 179
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=5.4e-38  Score=304.75  Aligned_cols=208  Identities=16%  Similarity=0.099  Sum_probs=167.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHH-HhcCCCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKA-AWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....      ..+..|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            4568888999999999999999998889999999965432      455667776 567899999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++.    ....+++..+..++.||+.||+|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       117 v~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          117 VLDYINGGELFYHLQ----RERCFLEPRARFYAAEIASALGYLHSL----NIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             EEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            999999999999994    346789999999999999999999999    999999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|||++|. ||......  +.....         +...+.
T Consensus       189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i---------~~~~~~  257 (373)
T 2r5t_A          189 NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNI---------LNKPLQ  257 (373)
T ss_dssp             GBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--HHHHHH---------HHSCCC
T ss_pred             cccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--HHHHHH---------HhcccC
Confidence                                       678999999999999999999 88643321  111111         111111


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCcc
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCMS  373 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  373 (376)
                       .+......+.+|+.+||+.||.+||++.
T Consensus       258 -~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          258 -LKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             -CCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             -CCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence             2223345778888999999999999985


No 180
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.2e-37  Score=301.35  Aligned_cols=222  Identities=18%  Similarity=0.228  Sum_probs=179.8

Q ss_pred             HHHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC-----------HHHHHHHHHHHhcC-CCCCceee
Q 044707          139 WEVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS-----------SSILEAEKKAAWSM-RHKNILGL  206 (376)
Q Consensus       139 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----------~~~~~~E~~~l~~l-~h~nIv~l  206 (376)
                      ........++|...+.||+|+||.||+|.+..+++.||||++....           .+.+.+|+.++.++ +||||+++
T Consensus        86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  165 (365)
T 2y7j_A           86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL  165 (365)
T ss_dssp             HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            3444555678999999999999999999998778999999987543           15678999999998 79999999


Q ss_pred             eeeEecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC
Q 044707          207 LGYHQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL  286 (376)
Q Consensus       207 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~  286 (376)
                      ++++...+..++||||+++|+|.+++.    ....+++..+..++.||+.||.|||+.    +|+||||||+|||++.++
T Consensus       166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~----gi~H~Dlkp~NIl~~~~~  237 (365)
T 2y7j_A          166 IDSYESSSFMFLVFDLMRKGELFDYLT----EKVALSEKETRSIMRSLLEAVSFLHAN----NIVHRDLKPENILLDDNM  237 (365)
T ss_dssp             EEEEEBSSEEEEEECCCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTC
T ss_pred             EEEEeeCCEEEEEEEeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEECCCC
Confidence            999999999999999999999999994    345799999999999999999999999    999999999999999999


Q ss_pred             CeEEcc--------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHH
Q 044707          287 RPMRIN--------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWAR  327 (376)
Q Consensus       287 ~~kl~D--------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~  327 (376)
                      .+||+|                                      ++.++|||||||++|||++|+ ||.......  .. 
T Consensus       238 ~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~-  314 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL--ML-  314 (365)
T ss_dssp             CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-
T ss_pred             CEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH--HH-
Confidence            999999                                      345899999999999999999 886432211  11 


Q ss_pred             HHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          328 PLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       328 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .....+... ...+    ........+.+++.+||+.||++|||+.+|+
T Consensus       315 ~~i~~~~~~-~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell  358 (365)
T 2y7j_A          315 RMIMEGQYQ-FSSP----EWDDRSSTVKDLISRLLQVDPEARLTAEQAL  358 (365)
T ss_dssp             HHHHHTCCC-CCHH----HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             HHHHhCCCC-CCCc----ccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            111111100 0000    0012235688899999999999999999874


No 181
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=7.2e-38  Score=290.98  Aligned_cols=211  Identities=16%  Similarity=0.167  Sum_probs=172.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcC---CcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSE---YHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..   .+..||+|.+.....    +.+.+|+.+++.++||||+++++++.+ +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            4678888999999999999998753   345799999986532    778899999999999999999999765 45689


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus        90 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           90 IMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI----NCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             EEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             EEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence            9999999999999953   345689999999999999999999999    999999999999999999999999      


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcC-hhhHHHHHHHHhhhhhhhhhccc
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQD-YRSLIEWARPLMLQRKFHELLEE  341 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~-~~~l~~~~~~~~~~~~~~~~~d~  341 (376)
                                                  ++.++||||||+++|||++ |+ ||... .......+    ..+.       
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~----~~~~-------  231 (281)
T 3cc6_A          163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL----EKGD-------  231 (281)
T ss_dssp             C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH----HHTC-------
T ss_pred             cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH----hcCC-------
Confidence                                        5678999999999999998 99 88622 22221111    1110       


Q ss_pred             cCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          342 DLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       342 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       ....+......+.+++.+||+.||++|||+.+|+
T Consensus       232 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell  265 (281)
T 3cc6_A          232 -RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV  265 (281)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence             0012223445788899999999999999999874


No 182
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-37  Score=298.68  Aligned_cols=210  Identities=14%  Similarity=0.167  Sum_probs=170.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCC--CCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRH--KNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~l  218 (376)
                      .+.|...+.||+|+||.||++.... ++.||||++.....     +.+.+|+.++..++|  +||+++++++...+..++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTT-SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCC-CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            3458888999999999999998865 58899999865432     678899999999986  999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      |||| .+|+|.+++.    ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++ ++.+||+|      
T Consensus        87 v~e~-~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~----~iiHrDikp~NIll~-~~~~kl~DFG~a~~  156 (343)
T 3dbq_A           87 VMEC-GNIDLNSWLK----KKKSIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIV-DGMLKLIDFGIANQ  156 (343)
T ss_dssp             EECC-CSEEHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred             EEeC-CCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCcceEEEE-CCcEEEeecccccc
Confidence            9994 6789999995    356799999999999999999999999    999999999999997 57899999      


Q ss_pred             ----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhh
Q 044707          293 ----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLML  331 (376)
Q Consensus       293 ----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~  331 (376)
                                                              ++.++|||||||++|||++|+ ||.........       
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-------  229 (343)
T 3dbq_A          157 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------  229 (343)
T ss_dssp             C------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH-------
T ss_pred             cCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH-------
Confidence                                                    144789999999999999999 88633222111       


Q ss_pred             hhhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          332 QRKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       332 ~~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         +...+++.... .+......+.+++.+||+.||.+|||+.||+
T Consensus       230 ---~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l  272 (343)
T 3dbq_A          230 ---LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL  272 (343)
T ss_dssp             ---HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             ---HHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHH
Confidence               11122222111 2223345778889999999999999999874


No 183
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.6e-37  Score=314.39  Aligned_cols=214  Identities=14%  Similarity=0.095  Sum_probs=178.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....      ..+.+|+.++.+++||||+++++++.+.+..++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            3678888999999999999999998889999999965332      6688999999999999999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||+++|+|.+++.........+++..+..++.||+.||.|||+.    +|+||||||+|||++.+|.+||+|       
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~----gIvHrDLKP~NILl~~~g~vkL~DFGla~~~  339 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR----NIIYRDLKPENVLLDDDGNVRISDLGLAVEL  339 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc----CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence            999999999999965323356799999999999999999999999    999999999999999999999999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh--hHHHHHHHHhhhhhhhhhccccC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR--SLIEWARPLMLQRKFHELLEEDL  343 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~--~l~~~~~~~~~~~~~~~~~d~~~  343 (376)
                                                ++.++|||||||++|||++|+ ||.....  .........         .....
T Consensus       340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i---------~~~~~  410 (543)
T 3c4z_A          340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV---------LEQAV  410 (543)
T ss_dssp             CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH---------HHCCC
T ss_pred             cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH---------hhccc
Confidence                                      678999999999999999999 8863321  111111111         11111


Q ss_pred             CCCChHHHHHHHHHHHHccccCCCCCCCcc
Q 044707          344 DFSDMHGIYRVMAAATQCTISKPTSRPCMS  373 (376)
Q Consensus       344 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  373 (376)
                       ..+......+.+++.+||+.||++||++.
T Consensus       411 -~~p~~~s~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          411 -TYPDKFSPASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             -CCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred             -CCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence             12334456788889999999999999874


No 184
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=5.9e-38  Score=309.02  Aligned_cols=215  Identities=15%  Similarity=0.177  Sum_probs=172.5

Q ss_pred             HHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----------HHHHHHHHHHhcCCCCCceeeeeeEec
Q 044707          144 EITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----------SILEAEKKAAWSMRHKNILGLLGYHQS  212 (376)
Q Consensus       144 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~E~~~l~~l~h~nIv~l~~~~~~  212 (376)
                      ...++|...+.||+|+||.||+|.+..+++.||||++.....           ..+.+|+.+|++++||||+++++++..
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            346789999999999999999999999889999999865321           247899999999999999999999754


Q ss_pred             CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC---CeE
Q 044707          213 DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL---RPM  289 (376)
Q Consensus       213 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~---~~k  289 (376)
                       +..++||||+++|+|.+++.    ....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++   .+|
T Consensus       212 -~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~----~ivHrDlkp~NIll~~~~~~~~~k  282 (419)
T 3i6u_A          212 -EDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIK  282 (419)
T ss_dssp             -SEEEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESSSSSSCCEE
T ss_pred             -CceEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEecCCCcceEE
Confidence             55799999999999999994    456799999999999999999999999    999999999999997544   599


Q ss_pred             Ecc-----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh--hhHHHHHHHHhh
Q 044707          290 RIN-----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY--RSLIEWARPLML  331 (376)
Q Consensus       290 l~D-----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~--~~l~~~~~~~~~  331 (376)
                      |+|                                   ++.++|||||||++|||++|+ ||....  ..+...    ..
T Consensus       283 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~----i~  358 (419)
T 3i6u_A          283 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ----IT  358 (419)
T ss_dssp             ECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHH----HH
T ss_pred             EeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHH----Hh
Confidence            999                                   345899999999999999999 886321  111111    11


Q ss_pred             hhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          332 QRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       332 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+... ..    ..........+.+++.+||+.||++|||+.|++
T Consensus       359 ~~~~~-~~----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l  398 (419)
T 3i6u_A          359 SGKYN-FI----PEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL  398 (419)
T ss_dssp             TTCCC-CC----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             cCCCC-CC----chhhcccCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            11100 00    001122345788899999999999999999874


No 185
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=4.4e-38  Score=296.66  Aligned_cols=225  Identities=16%  Similarity=0.156  Sum_probs=177.4

Q ss_pred             cHHHHHHHhcCCCCCceecCCCCEEEEEEEEc-----CCcEEEEEEecCCCCH----HHHHHHHHHHhcC-CCCCceeee
Q 044707          138 SWEVIMEITDKFTTKALMGECKNYVGYLGYLS-----EYHAFVLVKRFTGDSS----SILEAEKKAAWSM-RHKNILGLL  207 (376)
Q Consensus       138 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~~----~~~~~E~~~l~~l-~h~nIv~l~  207 (376)
                      ...+.....++|...+.||+|+||.||+|.+.     .+++.||||++.....    +.+.+|+.++.++ +||||++++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            33344444678999999999999999999863     4568999999976543    5788999999999 699999999


Q ss_pred             eeEecCC-ceEEEeecCCCCCHhhhcCCCCCC------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecC
Q 044707          208 GYHQSDS-ASVLVYPHPREGTLDNMLCPSPHN------------ELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGE  274 (376)
Q Consensus       208 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~D  274 (376)
                      +++...+ ..++||||+++|+|.+++......            ...+++..+..++.|++.||.|||+.    +|+|||
T Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~----~i~H~d  173 (316)
T 2xir_A           98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRD  173 (316)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT----TCCCSC
T ss_pred             EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC----Cccccc
Confidence            9987755 489999999999999999652111            12389999999999999999999999    999999


Q ss_pred             CCCCcEEEeCCCCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCc
Q 044707          275 LQLHNIFLRHDLRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQ  317 (376)
Q Consensus       275 lkp~NILl~~~~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~  317 (376)
                      |||+|||++.++.+||+|                                   ++.++||||||+++|||++ |. |+..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999                                   5779999999999999998 88 8763


Q ss_pred             ChhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          318 DYRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       318 ~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ....-  .+......+.     ...   .+......+.+++.+||+.||.+|||+.+|+
T Consensus       254 ~~~~~--~~~~~~~~~~-----~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  302 (316)
T 2xir_A          254 VKIDE--EFCRRLKEGT-----RMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELV  302 (316)
T ss_dssp             CCCSH--HHHHHHHHTC-----CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cchhH--HHHHHhccCc-----cCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            22110  1111111111     011   2223345788899999999999999999874


No 186
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.3e-37  Score=312.65  Aligned_cols=215  Identities=18%  Similarity=0.147  Sum_probs=172.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .+.|...+.||+|+||.||+|.+..++..||+|++.....     ..+.+|+.+++.++||||++++++|.+.+..++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4568888999999999999999998889999999875432     77899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC---CCeEEcc-----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD---LRPMRIN-----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~---~~~kl~D-----  292 (376)
                      ||+.+|+|.+++.    ....+++..+..|+.||+.||.|||+.    +|+||||||+|||++.+   +.+||+|     
T Consensus       116 e~~~~g~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~  187 (494)
T 3lij_A          116 ECYKGGELFDEII----HRMKFNEVDAAVIIKQVLSGVTYLHKH----NIVHRDLKPENLLLESKEKDALIKIVDFGLSA  187 (494)
T ss_dssp             ECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             ecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence            9999999999884    346799999999999999999999999    99999999999999764   4599999     


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++|||||||++|+|++|. ||......  +... ....+... ...+    
T Consensus       188 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~-~i~~~~~~-~~~~----  259 (494)
T 3lij_A          188 VFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILR-KVEKGKYT-FDSP----  259 (494)
T ss_dssp             ECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-HHHHTCCC-CCSG----
T ss_pred             ECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH-HHHhCCCC-CCch----
Confidence                                      578999999999999999999 88643321  1111 11111110 0001    


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ........+.+++.+||+.||.+|||+.++|
T Consensus       260 ~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l  290 (494)
T 3lij_A          260 EWKNVSEGAKDLIKQMLQFDSQRRISAQQAL  290 (494)
T ss_dssp             GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             hcccCCHHHHHHHHHHCCCChhhCccHHHHh
Confidence            1123345788899999999999999999874


No 187
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=1.7e-37  Score=320.74  Aligned_cols=204  Identities=17%  Similarity=0.197  Sum_probs=169.5

Q ss_pred             ceecCCCCEEEEEEEEc--CCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCCC
Q 044707          153 ALMGECKNYVGYLGYLS--EYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPRE  225 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~--~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  225 (376)
                      ++||+|+||.||+|.+.  .+++.||||+++....     +.+.+|+.++.+++|||||++++++.. +..++||||+.+
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            47999999999999664  4568999999976432     789999999999999999999999864 558899999999


Q ss_pred             CCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------------
Q 044707          226 GTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------------  292 (376)
Q Consensus       226 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------------  292 (376)
                      |+|.+++.    ....+++..+..|+.||+.||+|||+.    +|+||||||+|||++.++.+||+|             
T Consensus       454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~----~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  525 (635)
T ss_dssp             EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred             CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC----CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence            99999994    346799999999999999999999999    999999999999999999999999             


Q ss_pred             -----------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCC
Q 044707          293 -----------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSD  347 (376)
Q Consensus       293 -----------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~  347 (376)
                                             ++.++|||||||++|||++ |+ ||......-   +...+..+.        ....+
T Consensus       526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~~i~~~~--------~~~~p  594 (635)
T 4fl3_A          526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTAMLEKGE--------RMGCP  594 (635)
T ss_dssp             ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHHTTC--------CCCCC
T ss_pred             cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC--------CCCCC
Confidence                                   6779999999999999998 88 886332211   111111111        11134


Q ss_pred             hHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          348 MHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       348 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..+...+.+|+..||+.||++|||+.+|+
T Consensus       595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~  623 (635)
T 4fl3_A          595 AGCPREMYDLMNLCWTYDVENRPGFAAVE  623 (635)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            44567889999999999999999999873


No 188
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.8e-37  Score=312.42  Aligned_cols=215  Identities=16%  Similarity=0.126  Sum_probs=174.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC----------------HHHHHHHHHHHhcCCCCCceeeeee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS----------------SSILEAEKKAAWSMRHKNILGLLGY  209 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----------------~~~~~~E~~~l~~l~h~nIv~l~~~  209 (376)
                      .+.|...++||+|+||.||+|.+..++..||+|++....                .+.+.+|+.++++++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            577999999999999999999999888999999987532                2578899999999999999999999


Q ss_pred             EecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC---
Q 044707          210 HQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL---  286 (376)
Q Consensus       210 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~---  286 (376)
                      +.+.+..++||||+++|+|.+++.    ....+++..+..|+.||+.||.|||+.    +|+||||||+|||++.++   
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQII----NRHKFDECDAANIMKQILSGICYLHKH----NIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESSTTCCS
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCCcHHHEEEecCCCCc
Confidence            999999999999999999999984    346799999999999999999999999    999999999999998776   


Q ss_pred             CeEEcc-------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhh
Q 044707          287 RPMRIN-------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRK  334 (376)
Q Consensus       287 ~~kl~D-------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~  334 (376)
                      .+||+|                               ++.++|||||||++|+|++|. ||......  +.+. ....+.
T Consensus       187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~-~i~~~~  263 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIK-KVEKGK  263 (504)
T ss_dssp             SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-HHHHCC
T ss_pred             cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHH-HHHcCC
Confidence            689999                               578999999999999999999 88743321  1111 111111


Q ss_pred             hhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          335 FHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       335 ~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..... +    ........+.+++.+||+.||.+|||+.|+|
T Consensus       264 ~~~~~-~----~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l  300 (504)
T 3q5i_A          264 YYFDF-N----DWKNISDEAKELIKLMLTYDYNKRCTAEEAL  300 (504)
T ss_dssp             CCCCH-H----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CCCCc-c----ccCCCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence            00000 0    0122345788899999999999999999874


No 189
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=9e-38  Score=303.82  Aligned_cols=228  Identities=13%  Similarity=0.078  Sum_probs=171.5

Q ss_pred             HHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCCceeeeeeEec----------
Q 044707          143 MEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKNILGLLGYHQS----------  212 (376)
Q Consensus       143 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----------  212 (376)
                      ....++|...+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++..          
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~   81 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ   81 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-chHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence            345678999999999999999999998888999999987543 334579999999999999999999854          


Q ss_pred             ----------------------------CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhc
Q 044707          213 ----------------------------DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQE  264 (376)
Q Consensus       213 ----------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~  264 (376)
                                                  ....++||||++ |+|.+.+.........+++..+..|+.||+.||.|||+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  160 (383)
T 3eb0_A           82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL  160 (383)
T ss_dssp             ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                                        334789999998 487777643213456899999999999999999999999


Q ss_pred             CCCCCeeecCCCCCcEEEe-CCCCeEEcc---------------------------------CCCcchhhhHHHHHHHHH
Q 044707          265 CPRGPIAHGELQLHNIFLR-HDLRPMRIN---------------------------------AITKIRCLLFGVLLLRLF  310 (376)
Q Consensus       265 ~~~~~iiH~Dlkp~NILl~-~~~~~kl~D---------------------------------~~~~~Dv~S~Gvvl~ell  310 (376)
                          +|+||||||+|||++ .++.+||+|                                 ++.++|||||||++|||+
T Consensus       161 ----gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  236 (383)
T 3eb0_A          161 ----GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI  236 (383)
T ss_dssp             ----TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             ----cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence                999999999999998 688999999                                 688999999999999999


Q ss_pred             hCC-CCCcCh-hhHHHHHHHHhhhhh---h-------hhhccccCCC------CChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          311 CRR-SMPQDY-RSLIEWARPLMLQRK---F-------HELLEEDLDF------SDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       311 tg~-P~~~~~-~~l~~~~~~~~~~~~---~-------~~~~d~~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                      +|+ ||.... ......+........   +       ....-+....      .+......+.+|+.+||+.||.+|||+
T Consensus       237 ~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  316 (383)
T 3eb0_A          237 LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINP  316 (383)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            999 876322 111111111110000   0       0000000000      223345578899999999999999999


Q ss_pred             cccC
Q 044707          373 SEVL  376 (376)
Q Consensus       373 ~evl  376 (376)
                      .|++
T Consensus       317 ~e~l  320 (383)
T 3eb0_A          317 YEAM  320 (383)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9874


No 190
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.4e-37  Score=295.68  Aligned_cols=216  Identities=20%  Similarity=0.194  Sum_probs=170.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEE-----cCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYL-----SEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+     ..++..||||.+.....    ..+.+|+.++++++||||+++++++...+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            46788889999999999999984     34567899999975432    6788999999999999999999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCC---CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC---CCCeEE
Q 044707          217 VLVYPHPREGTLDNMLCPSPH---NELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH---DLRPMR  290 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~---~~~~kl  290 (376)
                      ++||||+++|+|.+++.....   ....+++..++.++.|++.||.|||+.    +|+||||||+|||++.   +..+||
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~----~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN----HFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC----CeecCcCCHhHEEEecCCCcceEEE
Confidence            999999999999999965211   124589999999999999999999999    9999999999999984   446999


Q ss_pred             cc-----------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhh
Q 044707          291 IN-----------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQR  333 (376)
Q Consensus       291 ~D-----------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~  333 (376)
                      +|                                   ++.++||||||+++|||++ |. |+......  ... .....+
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~-~~~~~~  261 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVL-EFVTSG  261 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH-HHHHTT
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHH-HHHhcC
Confidence            99                                   6789999999999999998 87 77633211  111 111111


Q ss_pred             hhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 KFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .        ....+......+.+++.+||+.||.+|||+.+|+
T Consensus       262 ~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  296 (327)
T 2yfx_A          262 G--------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL  296 (327)
T ss_dssp             C--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             C--------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            0        1112333446788899999999999999999874


No 191
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-37  Score=299.57  Aligned_cols=221  Identities=15%  Similarity=0.146  Sum_probs=168.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCC------
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDS------  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------  214 (376)
                      .+.|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            4668888999999999999999988889999999965322     67789999999999999999999987653      


Q ss_pred             ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--
Q 044707          215 ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--  292 (376)
Q Consensus       215 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--  292 (376)
                      ..++||||+ +++|.+++..     ..+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|  
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA----GIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC----CccccCcCHHHEEEcCCCCEEEEeee
Confidence            459999999 7899999953     4689999999999999999999999    999999999999999999999999  


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hhHHHHHHHHhh----------
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RSLIEWARPLML----------  331 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~l~~~~~~~~~----------  331 (376)
                                                   ++.++|||||||+++||++|+ ||.... ......+.....          
T Consensus       174 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~  253 (367)
T 1cm8_A          174 LARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL  253 (367)
T ss_dssp             TCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred             cccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence                                         678999999999999999999 876332 111111111100          


Q ss_pred             -hhhhhhh---c----cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          332 -QRKFHEL---L----EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       332 -~~~~~~~---~----d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       .......   +    ...+..........+.+|+.+||+.||++|||+.|++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l  306 (367)
T 1cm8_A          254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL  306 (367)
T ss_dssp             SCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             hhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHh
Confidence             0000000   0    0011112233456788899999999999999999874


No 192
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=9.7e-38  Score=291.38  Aligned_cols=216  Identities=14%  Similarity=0.096  Sum_probs=168.0

Q ss_pred             HhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCceeeeeeE-ecCCceEEEeec
Q 044707          145 ITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNILGLLGYH-QSDSASVLVYPH  222 (376)
Q Consensus       145 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lv~e~  222 (376)
                      ..++|...+.||+|+||.||+|.+..+++.||||++..... ..+.+|+.++..++|+|++..++++ ...+..++||||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            45789999999999999999999988889999998765544 6688999999999988877776655 567778999999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE---eCCCCeEEcc-------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL---RHDLRPMRIN-------  292 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl---~~~~~~kl~D-------  292 (376)
                      + +|+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||+   +.++.+||+|       
T Consensus        87 ~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           87 L-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK----NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             C-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             c-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            9 8999999962   345799999999999999999999999    99999999999999   7889999999       


Q ss_pred             ---------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh----hhHHHHHHHHhhhhh
Q 044707          293 ---------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY----RSLIEWARPLMLQRK  334 (376)
Q Consensus       293 ---------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~----~~l~~~~~~~~~~~~  334 (376)
                                                       ++.++|||||||++|||++|+ ||....    ........    ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~----~~~  234 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS----EKK  234 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH----HHH
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh----ccc
Confidence                                             456889999999999999999 886321    11111111    110


Q ss_pred             hhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          335 FHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       335 ~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .......    .....+..+.+++.+||+.||++|||+.+|+
T Consensus       235 ~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~  272 (296)
T 4hgt_A          235 MSTPIEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLR  272 (296)
T ss_dssp             HHSCHHH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHH
T ss_pred             ccchhhh----hhccCCHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence            1000000    0112235788999999999999999998873


No 193
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5e-37  Score=292.01  Aligned_cols=220  Identities=20%  Similarity=0.232  Sum_probs=172.9

Q ss_pred             HHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcC--CCCCceeeeeeEecC----CceE
Q 044707          144 EITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSM--RHKNILGLLGYHQSD----SASV  217 (376)
Q Consensus       144 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~----~~~~  217 (376)
                      ...++|...+.||+|+||.||+|.+.  ++.||||++.......+..|.+++..+  +||||+++++++...    ...+
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  111 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY  111 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence            34578999999999999999999986  689999999776666666677766655  899999999999887    6789


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-----CCCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQEC-----PRGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----~~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                      +||||+++|+|.+++..     ..+++..++.++.|++.||.|||+..     .+ +|+||||||+|||++.++.+||+|
T Consensus       112 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dikp~Nill~~~~~~kl~D  185 (337)
T 3mdy_A          112 LITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP-AIAHRDLKSKNILVKKNGTCCIAD  185 (337)
T ss_dssp             EEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-CEECSCCCGGGEEECTTSCEEECC
T ss_pred             EEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CEEecccchHHEEECCCCCEEEEe
Confidence            99999999999999953     36999999999999999999999762     22 799999999999999999999999


Q ss_pred             -------------------------------------CCC------cchhhhHHHHHHHHHhC----------C-CCCcC
Q 044707          293 -------------------------------------AIT------KIRCLLFGVLLLRLFCR----------R-SMPQD  318 (376)
Q Consensus       293 -------------------------------------~~~------~~Dv~S~Gvvl~elltg----------~-P~~~~  318 (376)
                                                           .+.      ++|||||||++|||++|          + |+...
T Consensus       186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~  265 (337)
T 3mdy_A          186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL  265 (337)
T ss_dssp             CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence                                                 112      38999999999999999          5 55411


Q ss_pred             ---hhhHHHHHHHHhhhhhhhhhccccCCC--CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          319 ---YRSLIEWARPLMLQRKFHELLEEDLDF--SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       319 ---~~~l~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ...... .....    ......+....  ....+...+.+++.+||+.||++|||+.+|+
T Consensus       266 ~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  323 (337)
T 3mdy_A          266 VPSDPSYED-MREIV----CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVK  323 (337)
T ss_dssp             SCSSCCHHH-HHHHH----TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             cCCCCchhh-hHHHH----hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHH
Confidence               111111 11111    11111222221  2346788899999999999999999999874


No 194
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=5.7e-37  Score=305.83  Aligned_cols=220  Identities=13%  Similarity=0.144  Sum_probs=172.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecC------C
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSD------S  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~  214 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            5778889999999999999999998889999999975422     6788999999999999999999998654      3


Q ss_pred             ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--
Q 044707          215 ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--  292 (376)
Q Consensus       215 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--  292 (376)
                      ..+|||||+.+ +|.+.+..      .+++..+..++.||+.||+|||+.    +|+||||||+|||++.++.+||+|  
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~----~iiHrDlkp~NIll~~~~~~kl~DFG  209 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFG  209 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred             eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCChHhEEEeCCCCEEEEEEE
Confidence            56999999986 57777742      489999999999999999999999    999999999999999999999999  


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hhHHHHHHHHhhh--------
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RSLIEWARPLMLQ--------  332 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~l~~~~~~~~~~--------  332 (376)
                                                    ++.++|||||||++|||++|+ ||.... ......+......        
T Consensus       210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~  289 (464)
T 3ttj_A          210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK  289 (464)
T ss_dssp             CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred             eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence                                          678999999999999999999 776322 1111111111000        


Q ss_pred             --hhhhhhcccc--CCC-----------------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 --RKFHELLEED--LDF-----------------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 --~~~~~~~d~~--~~~-----------------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ......+...  ...                 ........+.+|+.+||+.||++|||+.|+|
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L  354 (464)
T 3ttj_A          290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL  354 (464)
T ss_dssp             SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence              0000011100  000                 0111256788999999999999999999874


No 195
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.5e-37  Score=298.03  Aligned_cols=219  Identities=13%  Similarity=0.133  Sum_probs=167.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcC---CcEEEEEEecCCCCH--------------HHHHHHHHHHhcCCCCCceeeee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSE---YHAFVLVKRFTGDSS--------------SILEAEKKAAWSMRHKNILGLLG  208 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~~--------------~~~~~E~~~l~~l~h~nIv~l~~  208 (376)
                      .++|...+.||+|+||.||+|.+..   ++..+|+|++.....              ..+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            3568888999999999999999976   678999999876532              34667889999999999999999


Q ss_pred             eEec----CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC
Q 044707          209 YHQS----DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH  284 (376)
Q Consensus       209 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~  284 (376)
                      ++..    ....++||||+ +++|.+++..    ...+++..++.|+.||+.||.|||+.    +|+||||||+|||++.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~  186 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN----EYVHGDIKAANLLLGY  186 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEES
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCcCHHHEEEcc
Confidence            9987    77889999999 9999999953    34899999999999999999999999    9999999999999998


Q ss_pred             CC--CeEEcc----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhh
Q 044707          285 DL--RPMRIN----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRS  321 (376)
Q Consensus       285 ~~--~~kl~D----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~  321 (376)
                      ++  .+||+|                                        ++.++|||||||++|||++|+ ||......
T Consensus       187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~  266 (345)
T 2v62_A          187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD  266 (345)
T ss_dssp             SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred             CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence            87  999998                                        577999999999999999999 88532111


Q ss_pred             H--HHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          322 L--IEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       322 l--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .  ......... ..+...+.....  ....+..+.+++.+||+.||++|||+.+|+
T Consensus       267 ~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  320 (345)
T 2v62_A          267 PVAVQTAKTNLL-DELPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALK  320 (345)
T ss_dssp             HHHHHHHHHHHH-HTTTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             cHHHHHHHHhhc-ccccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            1  111111111 111111111110  113445788899999999999999999874


No 196
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=5.2e-37  Score=294.51  Aligned_cols=223  Identities=14%  Similarity=0.170  Sum_probs=172.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEec--------
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQS--------  212 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~--------  212 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     ..+.+|+.+++.++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            4678888999999999999999988889999999865443     678899999999999999999999877        


Q ss_pred             CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          213 DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       213 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                      .+..++||||+.+ +|.+.+.   .....+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIl~~~~~~~kl~D  167 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIHRN----KILHRDMKAANVLITRDGVLKLAD  167 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECC
T ss_pred             CceEEEEEeccCC-CHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCHHHEEEcCCCCEEEcc
Confidence            4468999999985 7777775   3345799999999999999999999999    999999999999999999999999


Q ss_pred             --------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhh
Q 044707          293 --------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQ  332 (376)
Q Consensus       293 --------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~  332 (376)
                                                            ++.++|||||||++|||++|+ ||..... .....+......
T Consensus       168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  247 (351)
T 3mi9_A          168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS  247 (351)
T ss_dssp             CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence                                                  578999999999999999999 7763322 222211111110


Q ss_pred             ---hhhhhhcc----ccCC-----C-CChH------HHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 ---RKFHELLE----EDLD-----F-SDMH------GIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 ---~~~~~~~d----~~~~-----~-~~~~------~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ..+...-.    ..+.     . ....      ....+.+|+.+||+.||++|||+.|++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  310 (351)
T 3mi9_A          248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL  310 (351)
T ss_dssp             CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHh
Confidence               00000000    0000     0 0000      124577899999999999999999874


No 197
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.3e-37  Score=311.95  Aligned_cols=215  Identities=17%  Similarity=0.145  Sum_probs=176.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCC-----CHHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGD-----SSSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .+.|...++||+|+||+||+|.+..+++.||||++...     ....+.+|+.++++++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            46688899999999999999999988899999998532     2377899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEe---CCCCeEEcc-----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLR---HDLRPMRIN-----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~---~~~~~kl~D-----  292 (376)
                      ||+.+|+|.+.+.    ....+++..+..|+.||+.||.|||+.    +|+||||||+|||++   .++.+||+|     
T Consensus       101 e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A          101 ELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             CCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             EcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            9999999999984    346799999999999999999999999    999999999999995   456799999     


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++|||||||++|+|++|+ ||......  +... .+..+..    ....+ 
T Consensus       173 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~-~i~~~~~----~~~~~-  244 (486)
T 3mwu_A          173 CFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILK-RVETGKY----AFDLP-  244 (486)
T ss_dssp             TBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-HHHHTCC----CSCSG-
T ss_pred             ECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH-HHHhCCC----CCCCc-
Confidence                                      567899999999999999999 88643221  1111 1111111    00000 


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ........+.+++.+||+.||.+|||+.++|
T Consensus       245 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l  275 (486)
T 3mwu_A          245 QWRTISDDAKDLIRKMLTFHPSLRITATQCL  275 (486)
T ss_dssp             GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             ccCCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            1233446788899999999999999999874


No 198
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=1.3e-36  Score=288.74  Aligned_cols=224  Identities=12%  Similarity=0.139  Sum_probs=176.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEE-cCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCC------CceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYL-SEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHK------NILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~------nIv~l~~~~~~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+ ..+++.||||++.....  +.+.+|+.++..++|+      +++++++++...+..
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            46788889999999999999998 45679999999986544  6788999999988765      499999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC------------
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH------------  284 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~------------  284 (376)
                      ++||||+ +++|.+++..  .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.            
T Consensus        93 ~lv~e~~-~~~l~~~l~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~~~~~~  165 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKE--NGFLPFRLDHIRKMAYQICKSVNFLHSN----KLTHTDLKPENILFVQSDYTEAYNPKIK  165 (339)
T ss_dssp             EEEEECC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred             EEEEcCC-CCCHHHHHHh--cCCCCCcHHHHHHHHHHHHHHHHHHHHC----CCcCCCCCHHHEEEeccccccccCCccc
Confidence            9999999 8899999965  3445789999999999999999999999    9999999999999987            


Q ss_pred             -------CCCeEEcc------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHH
Q 044707          285 -------DLRPMRIN------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEW  325 (376)
Q Consensus       285 -------~~~~kl~D------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~  325 (376)
                             ++.+||+|                              ++.++|||||||++|||++|+ ||..... .....
T Consensus       166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  245 (339)
T 1z57_A          166 RDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM  245 (339)
T ss_dssp             CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred             cccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                   66799999                              688999999999999999999 8863322 11111


Q ss_pred             HHHHhhh---hhh--------------------------hhhccc--cCCCCChHHHHHHHHHHHHccccCCCCCCCccc
Q 044707          326 ARPLMLQ---RKF--------------------------HELLEE--DLDFSDMHGIYRVMAAATQCTISKPTSRPCMSE  374 (376)
Q Consensus       326 ~~~~~~~---~~~--------------------------~~~~d~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e  374 (376)
                      +......   ..+                          .....+  ............+.+++.+||+.||.+|||+.|
T Consensus       246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  325 (339)
T 1z57_A          246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE  325 (339)
T ss_dssp             HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence            1111100   000                          000000  000123455678999999999999999999999


Q ss_pred             cC
Q 044707          375 VL  376 (376)
Q Consensus       375 vl  376 (376)
                      |+
T Consensus       326 ll  327 (339)
T 1z57_A          326 AL  327 (339)
T ss_dssp             HT
T ss_pred             Hh
Confidence            85


No 199
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=2.1e-37  Score=302.21  Aligned_cols=209  Identities=14%  Similarity=0.158  Sum_probs=169.2

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCC--CCCceeeeeeEecCCceEEE
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMR--HKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~lv  219 (376)
                      +.|...+.||+|+||.||+|.+.. ++.||||++.....     +.+.+|+.++.+++  |+||+++++++...+..++|
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            458888999999999999999876 58999999865432     67889999999996  59999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      || +.+|+|.+++..    ...+++..+..|+.||+.||.|||+.    +|+||||||+|||++ ++.+||+|       
T Consensus       135 ~E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~----~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIV-DGMLKLIDFGIANQM  204 (390)
T ss_dssp             EE-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT----TCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred             Ee-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC----CeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence            99 567899999953    45789999999999999999999999    999999999999995 57899999       


Q ss_pred             ---------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhh
Q 044707          293 ---------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQ  332 (376)
Q Consensus       293 ---------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~  332 (376)
                                                             ++.++|||||||++|||++|+ ||....... ..       
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-~~-------  276 (390)
T 2zmd_A          205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SK-------  276 (390)
T ss_dssp             ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HH-------
T ss_pred             cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-HH-------
Confidence                                                   234689999999999999999 886322211 11       


Q ss_pred             hhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 RKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 ~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        +..++++.... .+......+.+|+.+||+.||++|||+.|||
T Consensus       277 --~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell  319 (390)
T 2zmd_A          277 --LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL  319 (390)
T ss_dssp             --HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             --HHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHh
Confidence              11122222111 2222245778888999999999999999874


No 200
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=8.2e-37  Score=301.74  Aligned_cols=164  Identities=16%  Similarity=0.176  Sum_probs=148.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcC------CCCCceeeeeeEecCCceE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSM------RHKNILGLLGYHQSDSASV  217 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l------~h~nIv~l~~~~~~~~~~~  217 (376)
                      .++|...++||+|+||.||+|.+..+++.||||++.....  +.+.+|+.++..+      .|+||+++++++...+..+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            4568888999999999999999998889999999987554  6677888888876      5779999999999999999


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC--eEEcc---
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR--PMRIN---  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~--~kl~D---  292 (376)
                      +||||+. |+|.+++..  .....+++..+..|+.||+.||.|||+.    +|+||||||+|||++.++.  +||+|   
T Consensus       176 lv~e~~~-~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlKp~NILl~~~~~~~vkL~DFG~  248 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKK--NKFQGFSLPLVRKFAHSILQCLDALHKN----RIIHCDLKPENILLKQQGRSGIKVIDFGS  248 (429)
T ss_dssp             EEECCCC-CBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHHH----TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             EEEeccC-CCHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence            9999996 699999865  4445699999999999999999999999    9999999999999999987  99999   


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMP  316 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~  316 (376)
                                                 ++.++|||||||++|||++|+ ||.
T Consensus       249 a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~  300 (429)
T 3kvw_A          249 SCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP  300 (429)
T ss_dssp             CEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence                                       788999999999999999999 776


No 201
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.8e-37  Score=289.86  Aligned_cols=215  Identities=14%  Similarity=0.088  Sum_probs=171.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCceeeeeeE-ecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNILGLLGYH-QSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lv~e~~  223 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++..... ..+.+|+.++..++|++++..++++ ...+..++||||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            5678899999999999999999988889999999876544 6789999999999998877666655 5677789999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE---eCCCCeEEcc--------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL---RHDLRPMRIN--------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl---~~~~~~kl~D--------  292 (376)
                       +++|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||+   +.++.+||+|        
T Consensus        88 -~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           88 -GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK----NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             -CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             -CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence             8999999952   345799999999999999999999999    99999999999999   4888999999        


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh----hhHHHHHHHHhhhhhh
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY----RSLIEWARPLMLQRKF  335 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~----~~l~~~~~~~~~~~~~  335 (376)
                                                      ++.++|||||||++|||++|+ ||....    ......+..    ...
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----~~~  235 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE----KKM  235 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH----HHH
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc----ccc
Confidence                                            356899999999999999999 886321    111111111    111


Q ss_pred             hhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          336 HELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       336 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ......    .....+..+.+++.+||+.||++|||+.+|+
T Consensus       236 ~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  272 (296)
T 3uzp_A          236 STPIEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLR  272 (296)
T ss_dssp             HSCHHH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHH
T ss_pred             CCchHH----HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHH
Confidence            000000    1122335788899999999999999998873


No 202
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=6.1e-37  Score=295.04  Aligned_cols=232  Identities=16%  Similarity=0.119  Sum_probs=181.4

Q ss_pred             cccHHHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--------------HHHHHHHHHHhcCCCC
Q 044707          136 QLSWEVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--------------SILEAEKKAAWSMRHK  201 (376)
Q Consensus       136 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~E~~~l~~l~h~  201 (376)
                      .....++....++|...+.||+|+||.||+|.... +..||||++.....              +.+.+|+.++++++||
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   89 (362)
T 3pg1_A           11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP   89 (362)
T ss_dssp             HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCT
T ss_pred             HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCc
Confidence            34567888889999999999999999999999876 58999999854221              6788999999999999


Q ss_pred             CceeeeeeEec-----CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCC
Q 044707          202 NILGLLGYHQS-----DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQ  276 (376)
Q Consensus       202 nIv~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlk  276 (376)
                      ||+++++++..     ....++||||+. |+|.+++.   .....+++..+..|+.||+.||.|||+.    +|+|||||
T Consensus        90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlk  161 (362)
T 3pg1_A           90 NILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIH---DQRIVISPQHIQYFMYHILLGLHVLHEA----GVVHRDLH  161 (362)
T ss_dssp             TBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCC
T ss_pred             CccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHC----cCEecCCC
Confidence            99999999854     335799999998 58888886   3345799999999999999999999999    99999999


Q ss_pred             CCcEEEeCCCCeEEcc---------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hh
Q 044707          277 LHNIFLRHDLRPMRIN---------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RS  321 (376)
Q Consensus       277 p~NILl~~~~~~kl~D---------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~  321 (376)
                      |+|||++.++.+||+|                                 ++.++|||||||++|+|++|+ ||.... ..
T Consensus       162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  241 (362)
T 3pg1_A          162 PGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN  241 (362)
T ss_dssp             GGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             hHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999                                 677899999999999999999 886332 11


Q ss_pred             HHHHHHHHhhh-----------hhhhhhccccCCC--------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          322 LIEWARPLMLQ-----------RKFHELLEEDLDF--------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       322 l~~~~~~~~~~-----------~~~~~~~d~~~~~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ....+......           ......+......        ........+.+|+.+||+.||++|||+.|++
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  315 (362)
T 3pg1_A          242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL  315 (362)
T ss_dssp             HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence            11111111100           0011111111110        1122345688899999999999999999874


No 203
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.9e-38  Score=302.26  Aligned_cols=213  Identities=14%  Similarity=0.098  Sum_probs=174.3

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEc---CCcEEEEEEecCCCC-------HHHHHHHHHHHhcC-CCCCceeeeeeEecCC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLS---EYHAFVLVKRFTGDS-------SSILEAEKKAAWSM-RHKNILGLLGYHQSDS  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~-------~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~  214 (376)
                      .++|...+.||+|+||.||+|...   .+++.||||++....       ...+.+|+.++..+ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            467888999999999999999984   357899999987532       15677899999999 6999999999999999


Q ss_pred             ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--
Q 044707          215 ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--  292 (376)
Q Consensus       215 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--  292 (376)
                      ..++||||+++|+|.+++..    ...+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|  
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~DfG  204 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL----GIIYRDIKLENILLDSNGHVVLTDFG  204 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred             eEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEECCCCcEEEeeCC
Confidence            99999999999999999953    45799999999999999999999999    999999999999999999999999  


Q ss_pred             ----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh--hhHHHHHHHHhhhhhh
Q 044707          293 ----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY--RSLIEWARPLMLQRKF  335 (376)
Q Consensus       293 ----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~--~~l~~~~~~~~~~~~~  335 (376)
                                                        ++.++|||||||++|||++|+ ||....  ............    
T Consensus       205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~----  280 (355)
T 1vzo_A          205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK----  280 (355)
T ss_dssp             EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH----
T ss_pred             CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc----
Confidence                                              457899999999999999999 886322  122111111111    


Q ss_pred             hhhccccCCCCChHHHHHHHHHHHHccccCCCCCC-----CccccC
Q 044707          336 HELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRP-----CMSEVL  376 (376)
Q Consensus       336 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl  376 (376)
                           . ....+......+.+|+.+||+.||.+||     |+.+|+
T Consensus       281 -----~-~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell  320 (355)
T 1vzo_A          281 -----S-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIK  320 (355)
T ss_dssp             -----C-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHH
T ss_pred             -----c-CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHH
Confidence                 0 1112333445778899999999999999     777763


No 204
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=5.3e-37  Score=298.77  Aligned_cols=223  Identities=14%  Similarity=0.167  Sum_probs=165.1

Q ss_pred             HHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCC-CCCceeeeeeEecCC--c
Q 044707          144 EITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMR-HKNILGLLGYHQSDS--A  215 (376)
Q Consensus       144 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~--~  215 (376)
                      ...++|...+.||+|+||.||+|.+..+++.||||++.....     ..+.+|+.++..+. ||||+++++++...+  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            346789999999999999999999998889999999864322     66789999999997 999999999997544  6


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---  292 (376)
                      .++||||+. |+|.+++..     ..+++..+..++.|++.||+|||+.    +|+||||||+|||++.++.+||+|   
T Consensus        86 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~  155 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG----GLLHRDMKPSNILLNAECHVKVADFGL  155 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC----CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence            899999998 599999853     4789999999999999999999999    999999999999999999999987   


Q ss_pred             ----------------------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh
Q 044707          293 ----------------------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY  319 (376)
Q Consensus       293 ----------------------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~  319 (376)
                                                                          ++.++|||||||++|||++|+ ||....
T Consensus       156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                                                                456799999999999999999 776322


Q ss_pred             -hhHHHHHHHHhhhh---hhhhhc------------------cccCCC-------------CChHHHHHHHHHHHHcccc
Q 044707          320 -RSLIEWARPLMLQR---KFHELL------------------EEDLDF-------------SDMHGIYRVMAAATQCTIS  364 (376)
Q Consensus       320 -~~l~~~~~~~~~~~---~~~~~~------------------d~~~~~-------------~~~~~~~~l~~l~~~Cl~~  364 (376)
                       ......+.......   .+..+.                  ......             ........+.+|+.+||+.
T Consensus       236 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~  315 (388)
T 3oz6_A          236 TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF  315 (388)
T ss_dssp             HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence             11111111110000   000000                  000000             0112345788899999999


Q ss_pred             CCCCCCCccccC
Q 044707          365 KPTSRPCMSEVL  376 (376)
Q Consensus       365 dP~~RPs~~evl  376 (376)
                      ||++|||+.|++
T Consensus       316 dP~~R~t~~e~l  327 (388)
T 3oz6_A          316 NPNKRISANDAL  327 (388)
T ss_dssp             SGGGSCCHHHHT
T ss_pred             CcccCCCHHHHh
Confidence            999999999875


No 205
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=4.5e-37  Score=305.73  Aligned_cols=138  Identities=14%  Similarity=0.165  Sum_probs=115.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEec-----CCc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQS-----DSA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~~  215 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+|+.++||||+++++++..     ...
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            4678899999999999999999998889999999865322     678899999999999999999999854     356


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                      .++||||+. |+|.+++.    ....+++..+..|+.||+.||.|||+.    +|+||||||+||||+.++.+||+|
T Consensus       132 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~----~iiHrDlKp~NILl~~~~~~kl~D  199 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA----GILHRDLKPANCLVNQDCSVKVCD  199 (458)
T ss_dssp             EEEEECCCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTCCEEECC
T ss_pred             EEEEEeccc-cchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC----CcCCCCCChhhEEECCCCCEeecc
Confidence            899999985 69999994    356799999999999999999999999    999999999999999999999887


No 206
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=5.1e-37  Score=298.20  Aligned_cols=224  Identities=16%  Similarity=0.154  Sum_probs=174.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCC--------CCCceeeeeeEe----
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMR--------HKNILGLLGYHQ----  211 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~--------h~nIv~l~~~~~----  211 (376)
                      .++|...++||+|+||.||+|.+..+++.||||++.....  +.+.+|+.+++.++        |+||+++++++.    
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            4678889999999999999999988889999999986543  77889999999885        788999999987    


Q ss_pred             cCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCC-----
Q 044707          212 SDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDL-----  286 (376)
Q Consensus       212 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~-----  286 (376)
                      .....++||||+ +|+|.+.+..  .....+++..+..|+.||+.||.|||+++   +|+||||||+|||++.++     
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---givHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIK--SNYQGLPLPCVKKIIQQVLQGLDYLHTKC---RIIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECCCCSGGGEEECCCHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHeeEeccchhhhh
Confidence            566789999999 5566666643  33467999999999999999999999964   799999999999999775     


Q ss_pred             --------------------------------------------CeEEcc------------------------------
Q 044707          287 --------------------------------------------RPMRIN------------------------------  292 (376)
Q Consensus       287 --------------------------------------------~~kl~D------------------------------  292 (376)
                                                                  .+||+|                              
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~  269 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG  269 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSC
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCC
Confidence                                                        799999                              


Q ss_pred             CCCcchhhhHHHHHHHHHhCC-CCCcCh-------hhHHHHHHHHhhh--------hhhh-hhcc---------------
Q 044707          293 AITKIRCLLFGVLLLRLFCRR-SMPQDY-------RSLIEWARPLMLQ--------RKFH-ELLE---------------  340 (376)
Q Consensus       293 ~~~~~Dv~S~Gvvl~elltg~-P~~~~~-------~~l~~~~~~~~~~--------~~~~-~~~d---------------  340 (376)
                      ++.++|||||||++|||++|+ ||....       ......+......        +... ....               
T Consensus       270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (397)
T 1wak_A          270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG  349 (397)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence            788999999999999999999 886221       1111111111100        0000 0000               


Q ss_pred             ------ccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 ------EDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 ------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                            ... ..+......+.+|+.+||+.||++|||+.|||
T Consensus       350 ~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  390 (397)
T 1wak_A          350 LFEVLVEKY-EWSQEEAAGFTDFLLPMLELIPEKRATAAECL  390 (397)
T ss_dssp             HHHHHHHTS-CCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHH
T ss_pred             hhHhhhhhc-ccchhhHHHHHHHHHHHhccChhhcCCHHHHh
Confidence                  000 13456677899999999999999999999875


No 207
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=8.1e-37  Score=293.61  Aligned_cols=232  Identities=13%  Similarity=0.087  Sum_probs=166.8

Q ss_pred             HHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEecCCc--
Q 044707          140 EVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQSDSA--  215 (376)
Q Consensus       140 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--  215 (376)
                      .+.....++|...+.||+|+||.||+|.+..+++.||||++.....  ..+.+|+..+..++||||+++++++...+.  
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            3456668899999999999999999999988889999999865443  567788888999999999999999876443  


Q ss_pred             -----eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhh--hcCCCCCeeecCCCCCcEEEeC-CCC
Q 044707          216 -----SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMH--QECPRGPIAHGELQLHNIFLRH-DLR  287 (376)
Q Consensus       216 -----~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH--~~~~~~~iiH~Dlkp~NILl~~-~~~  287 (376)
                           .++||||+.+ +|.+.+.........+++..+..++.|++.||.|||  +.    +|+||||||+|||++. ++.
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~----~ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV----NVCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT----CCBCSCCCGGGEEEETTTTE
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC----CeecCcCCHHHEEEeCCCCc
Confidence                 7899999986 554433211134567899999999999999999999  88    9999999999999997 899


Q ss_pred             eEEcc---------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhh
Q 044707          288 PMRIN---------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQ  332 (376)
Q Consensus       288 ~kl~D---------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~  332 (376)
                      +||+|                                 ++.++|||||||++|||++|+ ||..... .....+......
T Consensus       171 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~  250 (360)
T 3e3p_A          171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC  250 (360)
T ss_dssp             EEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             EEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC
Confidence            99999                                 678999999999999999999 8873322 111111111000


Q ss_pred             --hhhhhhcccc-----------------CCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 --RKFHELLEED-----------------LDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 --~~~~~~~d~~-----------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ......+++.                 ...........+.+|+.+||+.||.+|||+.||+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  313 (360)
T 3e3p_A          251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL  313 (360)
T ss_dssp             CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHh
Confidence              0000000000                 0011223467889999999999999999999886


No 208
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=3.5e-39  Score=302.17  Aligned_cols=215  Identities=17%  Similarity=0.233  Sum_probs=162.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhc--CCCCCceeeeeeEecCC----ceEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWS--MRHKNILGLLGYHQSDS----ASVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~lv  219 (376)
                      .++|...+.||+|+||.||+|.+.  ++.||||++.......+.+|.+++..  ++||||+++++++....    ..++|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   79 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred             cceeeehhhccCCCCeEEEEEEEc--CcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence            357899999999999999999875  68899999987777888889998887  78999999999998876    78999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCCCeeecCCCCCcEEEeCCCCeEEc
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMH--------QECPRGPIAHGELQLHNIFLRHDLRPMRI  291 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH--------~~~~~~~iiH~Dlkp~NILl~~~~~~kl~  291 (376)
                      |||+++|+|.+++..     ..+++..+..++.|++.||.|||        +.    +|+||||||+|||++.++.+||+
T Consensus        80 ~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~----~ivH~Dlkp~Nil~~~~~~~kl~  150 (303)
T 3gxj_A           80 SDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP----AIAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             EECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-----CCCSCCCGGGC-CCTTCCC-BC
T ss_pred             EeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC----CEeeCcCCHHHeEECCCCCEEEe
Confidence            999999999999953     36888899999999999999999        77    99999999999999999999999


Q ss_pred             c-------------------------------------------CCCcchhhhHHHHHHHHHhC----------C-CCCc
Q 044707          292 N-------------------------------------------AITKIRCLLFGVLLLRLFCR----------R-SMPQ  317 (376)
Q Consensus       292 D-------------------------------------------~~~~~Dv~S~Gvvl~elltg----------~-P~~~  317 (376)
                      |                                           ++.++|||||||++|||++|          . |+..
T Consensus       151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~  230 (303)
T 3gxj_A          151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD  230 (303)
T ss_dssp             CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred             ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence            9                                           01469999999999999999          5 5541


Q ss_pred             Ch---hhHHHHHHHHhhhhhhhhhccccCCC--CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          318 DY---RSLIEWARPLMLQRKFHELLEEDLDF--SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       318 ~~---~~l~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..   ....... ...    ......+....  ....+...+.+|+.+||+.||++|||+.+|+
T Consensus       231 ~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~  289 (303)
T 3gxj_A          231 LVPSDPSVEEMR-KVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK  289 (303)
T ss_dssp             TCC-CCCCC-CH-HHH----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred             cCCCCccHHHHH-HHH----HHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHH
Confidence            10   0000000 000    11111222221  2346777899999999999999999999874


No 209
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=3e-37  Score=286.39  Aligned_cols=208  Identities=19%  Similarity=0.169  Sum_probs=172.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCCceeeeeeEec-------------
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKNILGLLGYHQS-------------  212 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-------------  212 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.... ..+.+|++++.+++||||+++++++..             
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   88 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS   88 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence            456888899999999999999998778999999997654 467899999999999999999998854             


Q ss_pred             ---CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeE
Q 044707          213 ---DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPM  289 (376)
Q Consensus       213 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~k  289 (376)
                         ....++||||+++|+|.+++..  .....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+|
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~k  162 (284)
T 2a19_B           89 RSKTKCLFIQMEFCDKGTLEQWIEK--RRGEKLDKVLALELFEQITKGVDYIHSK----KLINRDLKPSNIFLVDTKQVK  162 (284)
T ss_dssp             CCEEEEEEEEECCCCSCBHHHHHHH--GGGSCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEE
T ss_pred             ccCcceEEEEEeccCCCCHHHHHhh--ccCCCCCHHHHHHHHHHHHHHHHHHHhC----CeeeccCCHHHEEEcCCCCEE
Confidence               4457999999999999999964  3346799999999999999999999999    999999999999999999999


Q ss_pred             Ecc--------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhh
Q 044707          290 RIN--------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFH  336 (376)
Q Consensus       290 l~D--------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~  336 (376)
                      |+|                                ++.++||||||+++|||++|. |+....    .+. ....     
T Consensus       163 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~-~~~~-----  232 (284)
T 2a19_B          163 IGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----KFF-TDLR-----  232 (284)
T ss_dssp             ECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----HHH-HHHH-----
T ss_pred             ECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----HHH-HHhh-----
Confidence            999                                578899999999999999999 653111    011 1111     


Q ss_pred             hhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ...+   +......+.+++.+||+.||++|||+.||+
T Consensus       233 ---~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l  266 (284)
T 2a19_B          233 ---DGII---SDIFDKKEKTLLQKLLSKKPEDRPNTSEIL  266 (284)
T ss_dssp             ---TTCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ---cccc---cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence               1111   112234677888999999999999999874


No 210
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.2e-36  Score=286.95  Aligned_cols=221  Identities=14%  Similarity=0.119  Sum_probs=167.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCCCceeeeeeEe-----------
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHKNILGLLGYHQ-----------  211 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~-----------  211 (376)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.....   +.+.+|+.++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            3568888999999999999999998889999999876554   67889999999999999999999874           


Q ss_pred             ---cCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEe-CCCC
Q 044707          212 ---SDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLR-HDLR  287 (376)
Q Consensus       212 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~-~~~~  287 (376)
                         ..+..++||||+. |+|.+++..     ..+++..+..++.|++.||.|||+.    +|+||||||+|||++ .++.
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~  159 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA----NVLHRDLKPANLFINTEDLV  159 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEEETTTTE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC----CEecCCCCHHHEEEcCCCCe
Confidence               3467899999998 699999953     4689999999999999999999999    999999999999998 5678


Q ss_pred             eEEcc-------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHH
Q 044707          288 PMRIN-------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARP  328 (376)
Q Consensus       288 ~kl~D-------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~  328 (376)
                      +||+|                                     ++.++||||||+++|||++|+ ||..... .....+..
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  239 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE  239 (320)
T ss_dssp             EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            99998                                     566899999999999999999 8863321 11111111


Q ss_pred             Hhh---hhhhhhh-------cc-----ccCC--CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          329 LML---QRKFHEL-------LE-----EDLD--FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       329 ~~~---~~~~~~~-------~d-----~~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...   .....+.       +.     +...  .........+.+++.+||+.||++|||+.|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  304 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEAL  304 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHh
Confidence            000   0000000       00     0000  01123456788999999999999999999874


No 211
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=5.9e-37  Score=286.55  Aligned_cols=214  Identities=14%  Similarity=0.174  Sum_probs=172.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCceeeeeeEec-----------
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNILGLLGYHQS-----------  212 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nIv~l~~~~~~-----------  212 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....  +.+.+|+.++++++||||+++++++.+           
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            5678888999999999999999988889999999975433  678899999999999999999998865           


Q ss_pred             --CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEE
Q 044707          213 --DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMR  290 (376)
Q Consensus       213 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl  290 (376)
                        .+..++||||+++|+|.+++..   ....+++..++.++.|++.||.|||+.    +|+||||||+|||++.++.+||
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dlkp~Nil~~~~~~~kl  157 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ----GIIHRDLKPMNIFIDESRNVKI  157 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEE
T ss_pred             ccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC----CeecccCCHHhEEEcCCCCEEE
Confidence              3457999999999999999963   345688999999999999999999999    9999999999999999999999


Q ss_pred             cc------------------------------------------------CCCcchhhhHHHHHHHHHhCCCCCcChhhH
Q 044707          291 IN------------------------------------------------AITKIRCLLFGVLLLRLFCRRSMPQDYRSL  322 (376)
Q Consensus       291 ~D------------------------------------------------~~~~~Dv~S~Gvvl~elltg~P~~~~~~~l  322 (376)
                      +|                                                ++.++|||||||++|||++  |+.... ..
T Consensus       158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--p~~~~~-~~  234 (303)
T 1zy4_A          158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGM-ER  234 (303)
T ss_dssp             CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS--CCSSHH-HH
T ss_pred             eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh--ccCCch-hH
Confidence            87                                                3467999999999999998  343111 11


Q ss_pred             HHHHHHHhhhhhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          323 IEWARPLMLQRKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       323 ~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ..... ....      .....+. .+......+.+++.+||+.||.+|||+.+|+
T Consensus       235 ~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  282 (303)
T 1zy4_A          235 VNILK-KLRS------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL  282 (303)
T ss_dssp             HHHHH-HHHS------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHH-hccc------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHh
Confidence            11111 1111      0111111 3344456788899999999999999999874


No 212
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=3.2e-37  Score=295.05  Aligned_cols=221  Identities=13%  Similarity=0.112  Sum_probs=175.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--------------------HHHHHHHHHHhcCCCCCcee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--------------------SILEAEKKAAWSMRHKNILG  205 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------------------~~~~~E~~~l~~l~h~nIv~  205 (376)
                      .++|...+.||+|+||.||+|.+  +++.||||++.....                    +.+.+|+.++.+++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            46788999999999999999998  569999999864321                    67899999999999999999


Q ss_pred             eeeeEecCCceEEEeecCCCCCHhhh------cCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhh-cCCCCCeeecCCCCC
Q 044707          206 LLGYHQSDSASVLVYPHPREGTLDNM------LCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQ-ECPRGPIAHGELQLH  278 (376)
Q Consensus       206 l~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~-~~~~~~iiH~Dlkp~  278 (376)
                      +++++.+.+..++||||+++|+|.++      +..  .....+++..+..++.|++.||.|||+ .    +|+||||||+
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----~i~H~dl~p~  181 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK----NICHRDVKPS  181 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS----CEECCCCCGG
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC----CEeecCCChH
Confidence            99999999999999999999999999      643  336789999999999999999999999 8    9999999999


Q ss_pred             cEEEeCCCCeEEcc--------------------------------CCC-cchhhhHHHHHHHHHhCC-CCCcChhhHHH
Q 044707          279 NIFLRHDLRPMRIN--------------------------------AIT-KIRCLLFGVLLLRLFCRR-SMPQDYRSLIE  324 (376)
Q Consensus       279 NILl~~~~~~kl~D--------------------------------~~~-~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~  324 (376)
                      |||++.++.+||+|                                ++. ++||||||+++|||++|+ ||...... .+
T Consensus       182 Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~  260 (348)
T 2pml_X          182 NILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VE  260 (348)
T ss_dssp             GEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HH
T ss_pred             hEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HH
Confidence            99999999999999                                113 899999999999999999 88633221 11


Q ss_pred             HHHHHhhhhhhhhhcc------ccC----CCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          325 WARPLMLQRKFHELLE------EDL----DFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       325 ~~~~~~~~~~~~~~~d------~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .. .....+......+      +..    ..........+.+++.+||+.||.+|||+.|++
T Consensus       261 ~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l  321 (348)
T 2pml_X          261 LF-NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDAL  321 (348)
T ss_dssp             HH-HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             HH-HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            11 1111111100000      000    001133456788999999999999999999874


No 213
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=5.1e-37  Score=297.25  Aligned_cols=221  Identities=15%  Similarity=0.169  Sum_probs=166.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecC------C
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSD------S  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~  214 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            4678888999999999999999988889999999975322     6788999999999999999999998654      5


Q ss_pred             ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--
Q 044707          215 ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--  292 (376)
Q Consensus       215 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--  292 (376)
                      ..++|+||+ +++|.+++..     ..+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|  
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kL~DFG  177 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFG  177 (367)
T ss_dssp             CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred             eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCHhhEEECCCCCEEEeecc
Confidence            579999999 6799998853     5699999999999999999999999    999999999999999999999999  


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hhHHHHHHHHhhh---------
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RSLIEWARPLMLQ---------  332 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~l~~~~~~~~~~---------  332 (376)
                                                   ++.++|||||||++|||++|+ ||.... ......+......         
T Consensus       178 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~  257 (367)
T 2fst_X          178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI  257 (367)
T ss_dssp             -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred             ccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence                                         678999999999999999999 876332 1211111111100         


Q ss_pred             --hhhhhhccc--cCCC-----CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 --RKFHELLEE--DLDF-----SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 --~~~~~~~d~--~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ......+..  ....     ........+.+|+.+||+.||++|||+.|+|
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L  310 (367)
T 2fst_X          258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL  310 (367)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHh
Confidence              000001000  0000     0112235678899999999999999998874


No 214
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=6.9e-37  Score=295.49  Aligned_cols=221  Identities=16%  Similarity=0.192  Sum_probs=174.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecC-----Cce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSD-----SAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~  216 (376)
                      .++|...+.||+|+||.||+|.+..++..||||++.....    +.+.+|+.++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            5678899999999999999999998889999999975432    6788999999999999999999998764     368


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ++||||+. |+|.+++..     ..+++..+..|+.|++.||.|||+.    +|+||||||+|||++.++.+||+|    
T Consensus       106 ~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a  175 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA----NVLHRDLKPSNLLLNTTCDLKICDFGLA  175 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCChHhEEECCCCCEEEEeCcce
Confidence            99999997 599999853     4699999999999999999999999    999999999999999999999999    


Q ss_pred             ---------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcC-hhhHHHHHHHHhhhhh---
Q 044707          293 ---------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQD-YRSLIEWARPLMLQRK---  334 (376)
Q Consensus       293 ---------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~-~~~l~~~~~~~~~~~~---  334 (376)
                                                       ++.++|||||||++|||++|+ ||... .......+........   
T Consensus       176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
T 3qyz_A          176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED  255 (364)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred             EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence                                             678899999999999999999 88632 2222221111111000   


Q ss_pred             h------------hhhcccc-CCC--CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          335 F------------HELLEED-LDF--SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       335 ~------------~~~~d~~-~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +            ....... ...  ........+.+|+.+||+.||++|||+.|++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  312 (364)
T 3qyz_A          256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL  312 (364)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence            0            0000000 000  1122345788999999999999999999874


No 215
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=3.8e-38  Score=305.81  Aligned_cols=210  Identities=10%  Similarity=0.083  Sum_probs=161.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHH---HHHhcCCCCCceeee-------ee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEK---KAAWSMRHKNILGLL-------GY  209 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~---~~l~~l~h~nIv~l~-------~~  209 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....      +.+.+|+   .++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            4567788999999999999999887789999999863321      7788999   555566899999998       55


Q ss_pred             EecCC-----------------ceEEEeecCCCCCHhhhcCCCC---CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC
Q 044707          210 HQSDS-----------------ASVLVYPHPREGTLDNMLCPSP---HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP  269 (376)
Q Consensus       210 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~  269 (376)
                      +...+                 ..++||||+ +|+|.+++....   .....+++..++.|+.||+.||+|||+.    +
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~  226 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY----G  226 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC----C
Confidence            55543                 278999999 689999995310   1112344688899999999999999999    9


Q ss_pred             eeecCCCCCcEEEeCCCCeEEcc----------------------------------------CCCcchhhhHHHHHHHH
Q 044707          270 IAHGELQLHNIFLRHDLRPMRIN----------------------------------------AITKIRCLLFGVLLLRL  309 (376)
Q Consensus       270 iiH~Dlkp~NILl~~~~~~kl~D----------------------------------------~~~~~Dv~S~Gvvl~el  309 (376)
                      |+||||||+|||++.++.+||+|                                        ++.++|||||||++|||
T Consensus       227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el  306 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI  306 (377)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence            99999999999999999999998                                        24688999999999999


Q ss_pred             HhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          310 FCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       310 ltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ++|+ ||......           .....+.. .    .......+.+|+.+||+.||++|||+.+++
T Consensus       307 ltg~~Pf~~~~~~-----------~~~~~~~~-~----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l  358 (377)
T 3byv_A          307 WCADLPITKDAAL-----------GGSEWIFR-S----CKNIPQPVRALLEGFLRYPKEDRLLPLQAM  358 (377)
T ss_dssp             HHSSCCC-----------------CCSGGGGS-S----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHH
T ss_pred             HHCCCCCcccccc-----------cchhhhhh-h----ccCCCHHHHHHHHHHcCCCchhCCCHHHHh
Confidence            9999 88522110           01111111 1    122335788899999999999999999874


No 216
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=2.9e-36  Score=292.00  Aligned_cols=220  Identities=12%  Similarity=0.119  Sum_probs=174.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCce----
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSAS----  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~----  216 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+++.++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            4678888999999999999999998889999999976432     6788999999999999999999999877665    


Q ss_pred             --EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--
Q 044707          217 --VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--  292 (376)
Q Consensus       217 --~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--  292 (376)
                        ++||||+. |+|.+++.      ..+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|  
T Consensus       121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kL~Dfg  189 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFG  189 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred             eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCcCHHHeEECCCCCEEEEecC
Confidence              99999997 59998884      2499999999999999999999999    999999999999999999999999  


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh-hhHHHHHHHHhhh---------
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY-RSLIEWARPLMLQ---------  332 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~-~~l~~~~~~~~~~---------  332 (376)
                                                   ++.++|||||||++|||++|+ ||.... .............         
T Consensus       190 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  269 (371)
T 4exu_A          190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL  269 (371)
T ss_dssp             CC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred             cccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHh
Confidence                                         678999999999999999999 886332 1111111110000         


Q ss_pred             --hhhhhh---ccccC-CC---CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 --RKFHEL---LEEDL-DF---SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 --~~~~~~---~d~~~-~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ......   +.... ..   ........+.+|+.+||+.||++|||+.|++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  322 (371)
T 4exu_A          270 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL  322 (371)
T ss_dssp             SCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred             hhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHh
Confidence              000000   00000 00   1123356788999999999999999999874


No 217
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=2e-36  Score=293.14  Aligned_cols=220  Identities=13%  Similarity=0.149  Sum_probs=172.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCC------
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDS------  214 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------  214 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            4678889999999999999999988889999999975322     67889999999999999999999987665      


Q ss_pred             ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--
Q 044707          215 ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--  292 (376)
Q Consensus       215 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--  292 (376)
                      ..++||||+.+ +|.+.+.      ..+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|  
T Consensus       104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~Dfg  172 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFG  172 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC----CeecccCCHHHEEEcCCCCEEEEEee
Confidence            67999999975 7888884      2589999999999999999999999    999999999999999999999999  


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhh--------
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQ--------  332 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~--------  332 (376)
                                                    ++.++|||||||++|||++|+ ||..... .....+......        
T Consensus       173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  252 (371)
T 2xrw_A          173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK  252 (371)
T ss_dssp             C----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred             cccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence                                          678999999999999999999 8863321 111111000000        


Q ss_pred             --hhhhhhcc--ccC--------------CC---CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 --RKFHELLE--EDL--------------DF---SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 --~~~~~~~d--~~~--------------~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ..+.....  +..              +.   ........+.+|+.+||+.||++|||+.|++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l  317 (371)
T 2xrw_A          253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL  317 (371)
T ss_dssp             SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHh
Confidence              00000000  000              00   1122356788999999999999999999874


No 218
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=3.1e-36  Score=289.41  Aligned_cols=220  Identities=13%  Similarity=0.143  Sum_probs=173.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCc-----
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSA-----  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-----  215 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+++.++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            4668888999999999999999998889999999975432     677899999999999999999999987654     


Q ss_pred             -eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--
Q 044707          216 -SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--  292 (376)
Q Consensus       216 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--  292 (376)
                       .++||||+. |+|.+++.      ..+++..+..++.||+.||.|||+.    +|+||||||+|||++.++.+||+|  
T Consensus       103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEeECCCCcEEEeecc
Confidence             499999997 59988884      2499999999999999999999999    999999999999999999999999  


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhh----------
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLML----------  331 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~----------  331 (376)
                                                   ++.++|||||||++|||++|+ ||..... .....+.....          
T Consensus       172 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  251 (353)
T 3coi_A          172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL  251 (353)
T ss_dssp             CTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred             cccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence                                         577899999999999999999 8863321 11111111000          


Q ss_pred             -hhhhhhh---c----cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          332 -QRKFHEL---L----EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       332 -~~~~~~~---~----d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       .......   +    ...+..........+.+++.+||+.||++|||+.+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l  304 (353)
T 3coi_A          252 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL  304 (353)
T ss_dssp             SCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred             hhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence             0000000   0    0111112234456788999999999999999999874


No 219
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.8e-37  Score=294.55  Aligned_cols=210  Identities=16%  Similarity=0.153  Sum_probs=166.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCC-CCCceeeeeeEe--------cC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMR-HKNILGLLGYHQ--------SD  213 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~-h~nIv~l~~~~~--------~~  213 (376)
                      ..+|...++||+|+||.||+|.+..+++.||||++.....   +.+.+|+.++.++. ||||+++++++.        ..
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            3468888999999999999999988889999999865544   67889999999996 999999999984        33


Q ss_pred             CceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC--eeecCCCCCcEEEeCCCCeEEc
Q 044707          214 SASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP--IAHGELQLHNIFLRHDLRPMRI  291 (376)
Q Consensus       214 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~--iiH~Dlkp~NILl~~~~~~kl~  291 (376)
                      ...++||||+. |+|.+++... .....+++..++.|+.||+.||.|||+.    +  |+||||||+|||++.++.+||+
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~----~~~ivH~Dikp~NIl~~~~~~~kl~  180 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKM-ESRGPLSCDTVLKIFYQTCRAVQHMHRQ----KPPIIHRDLKVENLLLSNQGTIKLC  180 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHH-HTTCSCCHHHHHHHHHHHHHHHHHHHTS----SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred             ceEEEEEEecC-CCHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhC----CCCEEEccCCcccEEECCCCCEEEe
Confidence            44799999996 6999888531 2345799999999999999999999999    8  9999999999999999999999


Q ss_pred             c------------------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhH
Q 044707          292 N------------------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSL  322 (376)
Q Consensus       292 D------------------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l  322 (376)
                      |                                                ++.++|||||||++|||++|+ ||...... 
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-  259 (337)
T 3ll6_A          181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-  259 (337)
T ss_dssp             CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-
Confidence            8                                                234889999999999999999 88522110 


Q ss_pred             HHHHHHHhhhhhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          323 IEWARPLMLQRKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       323 ~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                                    .++...... ........+.+|+.+||+.||++|||+.||+
T Consensus       260 --------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l  300 (337)
T 3ll6_A          260 --------------RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV  300 (337)
T ss_dssp             --------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             --------------HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHH
Confidence                          011111100 1111223577888999999999999999874


No 220
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=6.1e-37  Score=285.76  Aligned_cols=215  Identities=17%  Similarity=0.132  Sum_probs=175.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC-----HHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS-----SSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|....+++.||+|++....     ...+.+|+.++++++||||+++++++...+..++||
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            467999999999999999999998888999999985432     278899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC---CCeEEcc-----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD---LRPMRIN-----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~---~~~kl~D-----  292 (376)
                      ||+.+++|.+++..    ...+++..+..++.|++.||.|||+.    +|+||||||+|||++.+   +.+||+|     
T Consensus       101 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A          101 ELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            99999999998843    35799999999999999999999999    99999999999999764   4699999     


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDF  345 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~  345 (376)
                                                ++.++||||||+++|+|++|+ |+......  +.. ..+..+...    .... 
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~-~~~~~~~~~----~~~~-  244 (287)
T 2wei_A          173 CFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DIL-KRVETGKYA----FDLP-  244 (287)
T ss_dssp             TBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH-HHHHHCCCC----CCSG-
T ss_pred             eecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHH-HHHHcCCCC----CCch-
Confidence                                      467899999999999999999 88643221  111 111111110    0000 


Q ss_pred             CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          346 SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       346 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ........+.+++.+||+.||++|||+.+++
T Consensus       245 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  275 (287)
T 2wei_A          245 QWRTISDDAKDLIRKMLTFHPSLRITATQCL  275 (287)
T ss_dssp             GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hhhhcCHHHHHHHHHHcccChhhCcCHHHHh
Confidence            1122345788899999999999999999874


No 221
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=2.8e-37  Score=298.95  Aligned_cols=217  Identities=13%  Similarity=0.063  Sum_probs=155.8

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHH---HHHHhcCCCCCceeee-------eeE
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAE---KKAAWSMRHKNILGLL-------GYH  210 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E---~~~l~~l~h~nIv~l~-------~~~  210 (376)
                      .+|...+.||+|+||.||+|.+..+++.||||++.....      +.+.+|   +.+|.. +||||++++       +++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence            347778999999999999999998889999999987542      566777   455555 799988755       343


Q ss_pred             ecC-----------------CceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHH------HHHHHHHHHHhHHhhhcCCC
Q 044707          211 QSD-----------------SASVLVYPHPREGTLDNMLCPSPHNELKLKFQQK------LKIAIGIAEGVRYMHQECPR  267 (376)
Q Consensus       211 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i~~gL~yLH~~~~~  267 (376)
                      ...                 ...+|||||++ |+|.+++..   ....+++..+      ..++.||+.||+|||+.   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---  213 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFST---LDFVYVFRGDEGILALHILTAQLIRLAANLQSK---  213 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHH---HHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHH---hccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence            332                 33799999999 899999963   1234455666      77889999999999999   


Q ss_pred             CCeeecCCCCCcEEEeCCCCeEEcc--------------------------------CCCcchhhhHHHHHHHHHhCC-C
Q 044707          268 GPIAHGELQLHNIFLRHDLRPMRIN--------------------------------AITKIRCLLFGVLLLRLFCRR-S  314 (376)
Q Consensus       268 ~~iiH~Dlkp~NILl~~~~~~kl~D--------------------------------~~~~~Dv~S~Gvvl~elltg~-P  314 (376)
                       +|+||||||+|||++.++.+||+|                                ++.++|||||||++|||++|+ |
T Consensus       214 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P  292 (371)
T 3q60_A          214 -GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP  292 (371)
T ss_dssp             -TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -CCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence             999999999999999999999999                                678999999999999999999 8


Q ss_pred             CCcChhhHHHHHHHHhhhhhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          315 MPQDYRSLIEWARPLMLQRKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       315 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      |........    ..+............... ........+.+|+.+||+.||++|||+.+++
T Consensus       293 f~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  351 (371)
T 3q60_A          293 FGLVTPGIK----GSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM  351 (371)
T ss_dssp             TTBCCTTCT----TCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHT
T ss_pred             CCCcCcccc----cchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence            873321100    000000000000111111 1234456888999999999999999999875


No 222
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.1e-36  Score=292.01  Aligned_cols=221  Identities=15%  Similarity=0.143  Sum_probs=173.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecC-----Cce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSD-----SAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~  216 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....    ..+.+|+.+++.++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            5678889999999999999999998889999999975433    5678999999999999999999987654     678


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ++||||+. |+|.+++..     ..+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|    
T Consensus        90 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~----~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  159 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS----NVIHRDLKPSNLLINSNCDLKVCDFGLA  159 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence            99999997 599999853     4699999999999999999999999    999999999999999999999998    


Q ss_pred             ----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHh
Q 044707          293 ----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLM  330 (376)
Q Consensus       293 ----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~  330 (376)
                                                              ++.++|||||||++|||++|+ ||..... .....+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  239 (353)
T 2b9h_A          160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII  239 (353)
T ss_dssp             EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence                                                    455799999999999999999 8763321 1111111111


Q ss_pred             hhh------------hhhhhccc--cCC-----CCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          331 LQR------------KFHELLEE--DLD-----FSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       331 ~~~------------~~~~~~d~--~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...            ...+.+..  ...     .........+.+++.+||+.||++|||+.||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  304 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL  304 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence            000            00000000  000     01123446788999999999999999999874


No 223
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.5e-36  Score=287.69  Aligned_cols=225  Identities=14%  Similarity=0.139  Sum_probs=172.9

Q ss_pred             HhcCCCCCceecCCCCEEEEEEEEc-CCcEEEEEEecCCCCH-----HHHHHHHHHHhcC---CCCCceeeeeeEe----
Q 044707          145 ITDKFTTKALMGECKNYVGYLGYLS-EYHAFVLVKRFTGDSS-----SILEAEKKAAWSM---RHKNILGLLGYHQ----  211 (376)
Q Consensus       145 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l---~h~nIv~l~~~~~----  211 (376)
                      ..++|...+.||+|+||.||+|.+. .+++.||+|++.....     ..+.+|+.+++.+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            4678999999999999999999995 5679999999864322     4566777777665   8999999999987    


Q ss_pred             -cCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEE
Q 044707          212 -SDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMR  290 (376)
Q Consensus       212 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl  290 (376)
                       .....++||||+. |+|.+++..  .....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~----gi~H~dlkp~Nili~~~~~~kl  161 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHSH----RVVHRDLKPQNILVTSSGQIKL  161 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEE
T ss_pred             CCCceEEEEEecCC-CCHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHHHC----CceeccCCHHHeEEcCCCCEEE
Confidence             5567899999998 699999965  3345699999999999999999999999    9999999999999999999999


Q ss_pred             cc--------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhh---h
Q 044707          291 IN--------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQ---R  333 (376)
Q Consensus       291 ~D--------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~---~  333 (376)
                      +|                                ++.++||||||+++|||++|+ ||..... .....+......   .
T Consensus       162 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  241 (326)
T 1blx_A          162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE  241 (326)
T ss_dssp             CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred             ecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence            99                                678999999999999999999 8763321 211111111100   0


Q ss_pred             hhhhh-------c----cccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          334 KFHEL-------L----EEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       334 ~~~~~-------~----d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .+...       .    ...+..........+.+++.+||+.||++|||+.+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  295 (326)
T 1blx_A          242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL  295 (326)
T ss_dssp             GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            00000       0    0000012233456788899999999999999998874


No 224
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=2.2e-37  Score=297.56  Aligned_cols=217  Identities=12%  Similarity=0.100  Sum_probs=170.5

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcC--------CcEEEEEEecCCCCHHHHHHHHHHHhcCCCCCcee-------------
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSE--------YHAFVLVKRFTGDSSSILEAEKKAAWSMRHKNILG-------------  205 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~-------------  205 (376)
                      ++|...+.||+|+||.||+|.+..        .++.||+|++...  ..+.+|+.++.+++||||++             
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i  119 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAI  119 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhcccchhhhhhhhccCCccCc
Confidence            568888999999999999999986        3689999999765  46889999999999999988             


Q ss_pred             --eeeeEec-CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE
Q 044707          206 --LLGYHQS-DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL  282 (376)
Q Consensus       206 --l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl  282 (376)
                        +++++.. .+..++||||+ +|+|.+++..  .....+++..++.|+.||+.||.|||+.    +|+||||||+|||+
T Consensus       120 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dikp~NIl~  192 (352)
T 2jii_A          120 PTCMGFGVHQDKYRFLVLPSL-GRSLQSALDV--SPKHVLSERSVLQVACRLLDALEFLHEN----EYVHGNVTAENIFV  192 (352)
T ss_dssp             CCCCEEEEETTTEEEEEEECC-CEEHHHHHHH--SGGGCCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCCGGGEEE
T ss_pred             cchhhccccCCcEEEEEecCC-CcCHHHHHHh--CCcCCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCHHHEEE
Confidence              5677665 67789999999 9999999964  2246799999999999999999999999    99999999999999


Q ss_pred             eCCC--CeEEcc----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh
Q 044707          283 RHDL--RPMRIN----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY  319 (376)
Q Consensus       283 ~~~~--~~kl~D----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~  319 (376)
                      +.++  .+||+|                                        ++.++|||||||++|||++|+ ||....
T Consensus       193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            9998  899998                                        567899999999999999999 887432


Q ss_pred             ---hhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          320 ---RSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       320 ---~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ..+....... . .......+...  ........+.+++.+||+.||++|||+.+|+
T Consensus       273 ~~~~~~~~~~~~~-~-~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  328 (352)
T 2jii_A          273 PNTEDIMKQKQKF-V-DKPGPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLR  328 (352)
T ss_dssp             TCHHHHHHHHHHH-H-HSCCCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             cCHHHHHHHHHhc-c-CChhhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHH
Confidence               1111111111 1 11111111111  1112346788899999999999999999874


No 225
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=9.2e-37  Score=317.21  Aligned_cols=207  Identities=16%  Similarity=0.123  Sum_probs=175.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC------HHHHHHHHHHHhcC-CCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS------SSILEAEKKAAWSM-RHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++....      ...+..|..++..+ +|+||+.+++++.+.+..+|
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            467888899999999999999999988999999987532      16778899999988 69999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..    ...+++..+..|+.||+.||+|||+.    +||||||||+||||+.++.+||+|      
T Consensus       420 V~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~----gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK----GIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT----SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             EEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC----CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            9999999999999953    45799999999999999999999999    999999999999999999999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCC
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                 ++.++|||||||++|||++|+ ||......  +....         ++...+.
T Consensus       492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--~~~~~---------i~~~~~~  560 (674)
T 3pfq_A          492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQS---------IMEHNVA  560 (674)
T ss_dssp             CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH---------HHSSCCC
T ss_pred             cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--HHHHH---------HHhCCCC
Confidence                                       778999999999999999999 88743321  11111         1111111


Q ss_pred             CCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          345 FSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       345 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                       .+.....++.+|+..||+.||++||++
T Consensus       561 -~p~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          561 -YPKSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             -CCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             -CCccCCHHHHHHHHHHccCCHHHCCCC
Confidence             233445678889999999999999997


No 226
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=4.1e-37  Score=286.67  Aligned_cols=213  Identities=19%  Similarity=0.186  Sum_probs=164.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcC-C--cEEEEEEecCCCCH------HHHHHHHHHHhcCCCCCceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSE-Y--HAFVLVKRFTGDSS------SILEAEKKAAWSMRHKNILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~-~--~~~vavK~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+.. +  +..||+|++.....      +.+.+|+.++.+++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            4568888999999999999998743 2  24699999975421      67889999999999999999999988765 8


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc----
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN----  292 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D----  292 (376)
                      ++||||+.+|+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|    
T Consensus        96 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~  168 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESK----RFIHRDLAARNLLLATRDLVKIGDFGLM  168 (291)
T ss_dssp             EEEEECCTTCBHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             eeeEecccCCCHHHHHHh---ccCCcCHHHHHHHHHHHHHHHHHHHhC----CcccCCCchheEEEcCCCCEEEcccccc
Confidence            899999999999999953   235689999999999999999999999    999999999999999999999999    


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhh
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~  338 (376)
                                                      ++.++||||||+++|||++ |+ ||......  +........+     
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~-----  241 (291)
T 1u46_A          169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKEG-----  241 (291)
T ss_dssp             EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTSC-----
T ss_pred             ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHccC-----
Confidence                                            3568999999999999999 88 88633221  1111111110     


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ... ..+......+.+++.+||+.||++|||+.+|+
T Consensus       242 --~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~  276 (291)
T 1u46_A          242 --ERL-PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR  276 (291)
T ss_dssp             --CCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             --CCC-CCCcCcCHHHHHHHHHHccCCcccCcCHHHHH
Confidence              000 12334456788999999999999999999874


No 227
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.7e-36  Score=298.24  Aligned_cols=159  Identities=18%  Similarity=0.200  Sum_probs=143.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecC-----Cc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSD-----SA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~  215 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.+|+.+|+.++|+||+++++++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            5678889999999999999999999899999999975432     6788999999999999999999998776     56


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---  292 (376)
                      .++||||+. |+|.+++.    ....+++..+..|+.||+.||.|||+.    +|+||||||+|||++.++.+||+|   
T Consensus       105 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~----givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFK----TPIFLTEEHIKTILYNLLLGENFIHES----GIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             EEEEEECCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEecCC-cCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence            899999987 59999994    356799999999999999999999999    999999999999999999999987   


Q ss_pred             -----------------------------------------------------CCCcchhhhHHHHHHHHHhCC
Q 044707          293 -----------------------------------------------------AITKIRCLLFGVLLLRLFCRR  313 (376)
Q Consensus       293 -----------------------------------------------------~~~~~Dv~S~Gvvl~elltg~  313 (376)
                                                                           ++.++|||||||++|||++|.
T Consensus       176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~  249 (432)
T 3n9x_A          176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML  249 (432)
T ss_dssp             CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTC
T ss_pred             cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcc
Confidence                                                                 456889999999999999854


No 228
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.5e-36  Score=288.97  Aligned_cols=219  Identities=18%  Similarity=0.230  Sum_probs=165.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHH--hcCCCCCceeeeeeEec-----CCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAA--WSMRHKNILGLLGYHQS-----DSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l--~~l~h~nIv~l~~~~~~-----~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+.  ++.||||++.......+..|.+++  ..++|+||+++++++..     ....++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l   89 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL   89 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEET--TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEEC--CeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence            467888899999999999999874  689999999876665566555554  45899999999985532     335689


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC------CCCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQEC------PRGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~------~~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                      ||||+++|+|.+++..     ...++..+..|+.||+.||.|||+..      .+ +|+||||||+|||++.++.+||+|
T Consensus        90 v~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~-~ivH~Dikp~Nill~~~~~~kL~D  163 (336)
T 3g2f_A           90 VMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP-AISHRDLNSRNVLVKNDGTCVISD  163 (336)
T ss_dssp             EECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBC-CEECSSCSGGGEEECTTSCEEECC
T ss_pred             EEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhcccccccc-ceeecccccceEEEcCCCcEEEee
Confidence            9999999999999953     34589999999999999999999873      22 699999999999999999999999


Q ss_pred             C------------------------------------------------CCcchhhhHHHHHHHHHhCC-CCCcChh---
Q 044707          293 A------------------------------------------------ITKIRCLLFGVLLLRLFCRR-SMPQDYR---  320 (376)
Q Consensus       293 ~------------------------------------------------~~~~Dv~S~Gvvl~elltg~-P~~~~~~---  320 (376)
                      +                                                +.++|||||||++|||++|. |+.....   
T Consensus       164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~  243 (336)
T 3g2f_A          164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE  243 (336)
T ss_dssp             CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred             ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence            1                                                13689999999999999998 6642110   


Q ss_pred             ---hH---------HHHHHHHhhhhhhhhhccccCCC---CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          321 ---SL---------IEWARPLMLQRKFHELLEEDLDF---SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       321 ---~l---------~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         .+         ..........    ....+.+..   ........+.+|+.+||+.||++|||+.||+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l  310 (336)
T 3g2f_A          244 YQMAFQTEVGNHPTFEDMQVLVSR----EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAE  310 (336)
T ss_dssp             CCCTTHHHHCSSCCHHHHHHHHTT----SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHhhhcccCCCchHHHHHhhhcc----cccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHH
Confidence               00         0000000000    111111111   2344677899999999999999999999874


No 229
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.3e-36  Score=304.43  Aligned_cols=218  Identities=15%  Similarity=0.105  Sum_probs=172.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCC-CCceeeeeeEecCCceEEEeecC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRH-KNILGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lv~e~~  223 (376)
                      .++|...++||+|+||.||+|.+..+++.||||++..... ..+..|++++..++| ++|..+..++...+..+|||||+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            4678999999999999999999988889999998875544 678899999999987 55666666777888889999999


Q ss_pred             CCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE---eCCCCeEEcc--------
Q 044707          224 REGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL---RHDLRPMRIN--------  292 (376)
Q Consensus       224 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl---~~~~~~kl~D--------  292 (376)
                       +++|.+++..   ....+++..++.|+.||+.||.|||+.    +|+||||||+||||   +.++.+||+|        
T Consensus        86 -g~sL~~ll~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~----gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           86 -GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK----SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             -CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             -CCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC----CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence             8999999962   345799999999999999999999999    99999999999999   6889999999        


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHHHHHHhhhhhhhhh
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~~~~~~~~~~~~~~  338 (376)
                                                      ++.++|||||||++|||++|+ ||..... ....... .+....+...
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~-~i~~~~~~~~  236 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE-KISEKKVATS  236 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHH-HHHHHHHHSC
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHH-HHhhcccccc
Confidence                                            456889999999999999999 8873221 1111111 1111111111


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +..    .......++.+|+..||+.||++||++.+|+
T Consensus       237 ~~~----l~~~~p~~l~~li~~cl~~dP~~RPs~~el~  270 (483)
T 3sv0_A          237 IEA----LCRGYPTEFASYFHYCRSLRFDDKPDYSYLK  270 (483)
T ss_dssp             HHH----HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             HHH----HhcCCcHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            111    0112235788999999999999999998863


No 230
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=9.7e-36  Score=284.70  Aligned_cols=224  Identities=10%  Similarity=0.094  Sum_probs=174.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCc-EEEEEEecCCCCH--HHHHHHHHHHhcCCCCC------ceeeeeeEecCCce
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYH-AFVLVKRFTGDSS--SILEAEKKAAWSMRHKN------ILGLLGYHQSDSAS  216 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~-~~vavK~~~~~~~--~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~~  216 (376)
                      .++|...+.||+|+||.||+|.+..++ ..||+|++.....  +.+.+|+.+++.++|+|      ++.+++++...+..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            467888999999999999999997654 7999999986543  67888999999987665      89999999999999


Q ss_pred             EEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE--------------
Q 044707          217 VLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL--------------  282 (376)
Q Consensus       217 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl--------------  282 (376)
                      ++||||+ +++|.+++..  .....+++..+..|+.||+.||.|||+.    +|+||||||+|||+              
T Consensus        98 ~lv~e~~-~~~l~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~~~~~~  170 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKE--NNFQPYPLPHVRHMAYQLCHALRFLHEN----QLTHTDLKPENILFVNSEFETLYNEHKS  170 (355)
T ss_dssp             EEEEECC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred             EEEEecc-CCChHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEeccccccccccccc
Confidence            9999999 5677777754  3345799999999999999999999999    99999999999999              


Q ss_pred             -----eCCCCeEEcc------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh-hHHHH
Q 044707          283 -----RHDLRPMRIN------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR-SLIEW  325 (376)
Q Consensus       283 -----~~~~~~kl~D------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~-~l~~~  325 (376)
                           +.++.+||+|                              ++.++|||||||++|||++|+ ||..... .....
T Consensus       171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  250 (355)
T 2eu9_A          171 CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM  250 (355)
T ss_dssp             CCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                 6788999999                              688999999999999999999 8873322 21111


Q ss_pred             HHHHhhh---hhh-----hh---------------------hccc--cCCCCChHHHHHHHHHHHHccccCCCCCCCccc
Q 044707          326 ARPLMLQ---RKF-----HE---------------------LLEE--DLDFSDMHGIYRVMAAATQCTISKPTSRPCMSE  374 (376)
Q Consensus       326 ~~~~~~~---~~~-----~~---------------------~~d~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e  374 (376)
                      +......   ..+     ..                     ...+  ............+.+|+.+||+.||++|||+.|
T Consensus       251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  330 (355)
T 2eu9_A          251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE  330 (355)
T ss_dssp             HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence            1111100   000     00                     0000  000123344568889999999999999999999


Q ss_pred             cC
Q 044707          375 VL  376 (376)
Q Consensus       375 vl  376 (376)
                      |+
T Consensus       331 ~l  332 (355)
T 2eu9_A          331 AL  332 (355)
T ss_dssp             HT
T ss_pred             Hh
Confidence            85


No 231
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1.3e-35  Score=288.47  Aligned_cols=165  Identities=16%  Similarity=0.158  Sum_probs=146.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCC-CC-----CceeeeeeEecCCceE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMR-HK-----NILGLLGYHQSDSASV  217 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~~~~~  217 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....  ..+..|+.++..++ |+     +|+++++++...+..+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  132 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC  132 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence            6789999999999999999999998889999999986543  66778888888875 54     4999999999999999


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhh--cCCCCCeeecCCCCCcEEEe--CCCCeEEcc-
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQ--ECPRGPIAHGELQLHNIFLR--HDLRPMRIN-  292 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~--~~~~~~iiH~Dlkp~NILl~--~~~~~kl~D-  292 (376)
                      +||||+. |+|.+++..  .....+++..+..++.|++.||.|||.  .    +|+||||||+|||++  .++.+||+| 
T Consensus       133 lv~e~~~-~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~lH~~~~----~ivHrDlkp~NIll~~~~~~~~kL~DF  205 (382)
T 2vx3_A          133 LVFEMLS-YNLYDLLRN--TNFRGVSLNLTRKFAQQMCTALLFLATPEL----SIIHCDLKPENILLCNPKRSAIKIVDF  205 (382)
T ss_dssp             EEEECCC-CBHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHTSTTT----CEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred             EEEecCC-CCHHHHHhh--cCcCCCCHHHHHHHHHHHHHHHHHhccCCC----CEEcCCCCcccEEEecCCCCcEEEEec
Confidence            9999996 599999965  334569999999999999999999994  5    899999999999995  477899999 


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCc
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQ  317 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~  317 (376)
                                                   ++.++|||||||++|||++|+ ||..
T Consensus       206 G~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          206 GSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             TTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                                         678999999999999999999 8873


No 232
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=4.4e-37  Score=290.43  Aligned_cols=210  Identities=16%  Similarity=0.233  Sum_probs=169.4

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+...   +|+|++.....     +.+.+|+.++++++|+||+++++++...+..++||
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~  108 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT  108 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESSS---EEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcCe---EEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence            46688889999999999999998643   99999875432     56778999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc--------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN--------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D--------  292 (376)
                      ||+.+++|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++ ++.+||+|        
T Consensus       109 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~----~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~  180 (319)
T 2y4i_B          109 SLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK----GILHKDLKSKNVFYD-NGKVVITDFGLFSISG  180 (319)
T ss_dssp             BCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHT----TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred             ecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC----CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence            99999999999963   345799999999999999999999999    999999999999998 67899998        


Q ss_pred             ---------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhh
Q 044707          293 ---------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQ  332 (376)
Q Consensus       293 ---------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~  332 (376)
                                                             ++.++||||||+++|||++|+ ||.......  ..... ..
T Consensus       181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~-~~  257 (319)
T 2y4i_B          181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQM-GT  257 (319)
T ss_dssp             -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHHH-HT
T ss_pred             cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHh-cc
Confidence                                                   145799999999999999999 887433221  11111 11


Q ss_pred             hhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          333 RKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       333 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +     ..+..  ........+.+++.+||+.||++|||+.+|+
T Consensus       258 ~-----~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~  294 (319)
T 2y4i_B          258 G-----MKPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLM  294 (319)
T ss_dssp             T-----CCCCC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred             C-----CCCCC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            1     11111  1112334678889999999999999999874


No 233
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.8e-36  Score=289.66  Aligned_cols=218  Identities=11%  Similarity=0.102  Sum_probs=163.8

Q ss_pred             hcCCCCC-ceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCCceeeeeeEec----CCceEEEe
Q 044707          146 TDKFTTK-ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKNILGLLGYHQS----DSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~-~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv~  220 (376)
                      .++|... +.||+|+||.||+|.+..+++.||||++..... ...+....+..+.|+||+++++++..    ....++||
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~  105 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM  105 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence            6778874 569999999999999998889999999975432 22233344566789999999999876    44579999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC---CCCeEEcc-----
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH---DLRPMRIN-----  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~---~~~~kl~D-----  292 (376)
                      ||+++|+|.+++..  .....+++..++.|+.|++.||.|||+.    +|+||||||+|||++.   ++.+||+|     
T Consensus       106 e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~ql~~~l~~LH~~----~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~  179 (336)
T 3fhr_A          106 ECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSH----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK  179 (336)
T ss_dssp             ECCTTEEHHHHHHT--C-CCCCBHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             eccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence            99999999999975  4446799999999999999999999999    9999999999999976   45599999     


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHH-HHHHHHhhhhhhhhhccccCC
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLI-EWARPLMLQRKFHELLEEDLD  344 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~-~~~~~~~~~~~~~~~~d~~~~  344 (376)
                                                ++.++||||||+++|+|++|+ ||........ .........+      .....
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~~  253 (336)
T 3fhr_A          180 ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG------QYGFP  253 (336)
T ss_dssp             EC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------CCC
T ss_pred             eccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc------ccccC
Confidence                                      355789999999999999999 8863322110 0000000000      00011


Q ss_pred             C-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          345 F-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       345 ~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      . ........+.+++.+||+.||++|||+.|++
T Consensus       254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  286 (336)
T 3fhr_A          254 NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFM  286 (336)
T ss_dssp             TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             chhhccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            0 1233456788899999999999999999874


No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=4.5e-36  Score=285.04  Aligned_cols=217  Identities=12%  Similarity=0.102  Sum_probs=170.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHH-HHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKK-AAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....    ..+..|+. +++.++||||+++++++...+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            3668888999999999999999988889999999976532    45556665 677789999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCC-CCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          221 PHPREGTLDNMLCPS-PHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      ||+.+ +|.+++... ......+++..+..++.|++.||.|||+..   +|+||||||+|||++.++.+||+|       
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL---KIIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH---SCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC---CEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 887776410 012467999999999999999999999963   799999999999999999999999       


Q ss_pred             -----------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhcc--
Q 044707          293 -----------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLE--  340 (376)
Q Consensus       293 -----------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d--  340 (376)
                                                   ++.++||||||+++|||++|+ ||....... +.         +.....  
T Consensus       177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~---------~~~~~~~~  246 (327)
T 3aln_A          177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQ---------LTQVVKGD  246 (327)
T ss_dssp             -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------CCCCCSC
T ss_pred             ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HH---------HHHHhcCC
Confidence                                         456899999999999999999 886322110 00         111111  


Q ss_pred             -ccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          341 -EDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       341 -~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       +.+.. ........+.+++.+||+.||++|||+.+|+
T Consensus       247 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  284 (327)
T 3aln_A          247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL  284 (327)
T ss_dssp             CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHH
Confidence             11111 1223456788999999999999999999885


No 235
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.1e-36  Score=299.91  Aligned_cols=224  Identities=18%  Similarity=0.163  Sum_probs=168.2

Q ss_pred             cCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCCceeeeeeEecC------CceEEEe
Q 044707          147 DKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKNILGLLGYHQSD------SASVLVY  220 (376)
Q Consensus       147 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~lv~  220 (376)
                      ..|...+.||+|+||.||+|.+..+++.||||++.... ..+.+|+++++.++|+||++++++|...      ...++||
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~  132 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL  132 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence            45788899999999999999998888999999986543 3345799999999999999999988542      2267999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC-CCeEEcc-------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD-LRPMRIN-------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~-~~~kl~D-------  292 (376)
                      ||+++ +|.+.+.........+++..+..++.||+.||.|||+.    +|+||||||+|||++.+ +.+||+|       
T Consensus       133 e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          133 DYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             ECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             hcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            99986 66665532112356799999999999999999999999    99999999999999965 5679999       


Q ss_pred             --------------------------CCCcchhhhHHHHHHHHHhCC-CCCcCh--hhHHHHHHHHhh--hhhhhh----
Q 044707          293 --------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDY--RSLIEWARPLML--QRKFHE----  337 (376)
Q Consensus       293 --------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~--~~l~~~~~~~~~--~~~~~~----  337 (376)
                                                ++.++|||||||++|||++|+ ||....  ..+...+...-.  ...+..    
T Consensus       208 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~  287 (420)
T 1j1b_A          208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN  287 (420)
T ss_dssp             CTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred             ccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh
Confidence                                      678999999999999999999 876332  122222211000  000100    


Q ss_pred             ---hccccCCC------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          338 ---LLEEDLDF------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       338 ---~~d~~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ..-+.+..      .......++.+|+.+||+.||.+|||+.|++
T Consensus       288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l  335 (420)
T 1j1b_A          288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC  335 (420)
T ss_dssp             CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHh
Confidence               00011110      1123346788999999999999999998864


No 236
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=4.5e-36  Score=289.74  Aligned_cols=207  Identities=12%  Similarity=-0.007  Sum_probs=169.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEE-----EcCCcEEEEEEecCCCCHHHHHHHHHHHhcCC---CCCceeeeeeEecCCceE
Q 044707          146 TDKFTTKALMGECKNYVGYLGY-----LSEYHAFVLVKRFTGDSSSILEAEKKAAWSMR---HKNILGLLGYHQSDSASV  217 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~  217 (376)
                      .++|...++||+|+||.||+|.     ...+++.||||++.......+..|+.++..++   |+||+.+++++...+..+
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~  143 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV  143 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence            5678888999999999999994     44567899999999887788899999999887   999999999999999999


Q ss_pred             EEeecCCCCCHhhhcCCCC-CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC-----------C
Q 044707          218 LVYPHPREGTLDNMLCPSP-HNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH-----------D  285 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~-----------~  285 (376)
                      |||||+++|+|.+++.... .....+++..++.|+.||+.||+|||+.    +|+||||||+|||++.           +
T Consensus       144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~----~ivHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC----EIIHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECGGGTCC------C
T ss_pred             EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC----CeecCCCCHHHEEecccccCcccccccc
Confidence            9999999999999995311 1356799999999999999999999999    9999999999999998           8


Q ss_pred             CCeEEcc-----------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHH
Q 044707          286 LRPMRIN-----------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPL  329 (376)
Q Consensus       286 ~~~kl~D-----------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~  329 (376)
                      +.+||+|                                   ++.++|||||||++|||+||+ |+......        
T Consensus       220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------  291 (365)
T 3e7e_A          220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG--------  291 (365)
T ss_dssp             TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT--------
T ss_pred             CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC--------
Confidence            9999999                                   688999999999999999999 87522110        


Q ss_pred             hhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCc
Q 044707          330 MLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCM  372 (376)
Q Consensus       330 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  372 (376)
                          .  ..+...+...+  ..+.+.+++..||+.+|.+|++.
T Consensus       292 ----~--~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~  326 (365)
T 3e7e_A          292 ----E--CKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPS  326 (365)
T ss_dssp             ----E--EEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCC
T ss_pred             ----c--eeechhccccC--cHHHHHHHHHHHcCCCCCCcchH
Confidence                0  01111121111  23456677799999999999643


No 237
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=5e-36  Score=282.82  Aligned_cols=215  Identities=12%  Similarity=0.097  Sum_probs=163.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEe
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVY  220 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  220 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....     +.+.++..+++.++||||+++++++...+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            4668888999999999999999988889999999976543     33445556788889999999999999999999999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhh-cCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQ-ECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~-~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      ||+ ++.+..+..   .....+++..+..++.|++.||.|||+ .    +|+||||||+|||++.++.+||+|       
T Consensus       104 e~~-~~~~~~l~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  175 (318)
T 2dyl_A          104 ELM-GTCAEKLKK---RMQGPIPERILGKMTVAIVKALYYLKEKH----GVIHRDVKPSNILLDERGQIKLCDFGISGRL  175 (318)
T ss_dssp             CCC-SEEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHHH----CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             ecc-CCcHHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHhhC----CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence            999 445655553   224679999999999999999999998 6    899999999999999999999999       


Q ss_pred             ------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccc
Q 044707          293 ------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEE  341 (376)
Q Consensus       293 ------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~  341 (376)
                                                    ++.++||||||+++|||++|+ ||....... ........ +     ..+
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~-~-----~~~  248 (318)
T 2dyl_A          176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-EVLTKVLQ-E-----EPP  248 (318)
T ss_dssp             -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHHHHHH-S-----CCC
T ss_pred             cCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-HHHHHHhc-c-----CCC
Confidence                                          345899999999999999999 886422211 11111111 1     011


Q ss_pred             cCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          342 DLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       342 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ... ........+.+++.+||+.||.+|||+.+|+
T Consensus       249 ~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  282 (318)
T 2dyl_A          249 LLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL  282 (318)
T ss_dssp             CCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred             CCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            111 1122345788899999999999999999875


No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.2e-37  Score=288.91  Aligned_cols=206  Identities=18%  Similarity=0.261  Sum_probs=165.7

Q ss_pred             HhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---------HHHHHHHHHHhcC----CCCCceeeeeeEe
Q 044707          145 ITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---------SILEAEKKAAWSM----RHKNILGLLGYHQ  211 (376)
Q Consensus       145 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~E~~~l~~l----~h~nIv~l~~~~~  211 (376)
                      ..++|...+.||+|+||.||+|.+..+++.||||++.....         ..+.+|+.++.++    +|+||+++++++.
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~  108 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE  108 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred             hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence            36779999999999999999999988889999999975532         2345789988888    8999999999999


Q ss_pred             cCCceEEEeec-CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEe-CCCCeE
Q 044707          212 SDSASVLVYPH-PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLR-HDLRPM  289 (376)
Q Consensus       212 ~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~-~~~~~k  289 (376)
                      ..+..++|||| +.+++|.+++..    ...+++..++.++.|++.||.|||+.    +|+||||||+|||++ .++.+|
T Consensus       109 ~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~k  180 (312)
T 2iwi_A          109 TQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR----GVVHRDIKDENILIDLRRGCAK  180 (312)
T ss_dssp             ----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH----TEECCCCSGGGEEEETTTTEEE
T ss_pred             cCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC----CeeecCCChhhEEEeCCCCeEE
Confidence            99999999999 789999999953    45799999999999999999999999    999999999999999 889999


Q ss_pred             Ecc--------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhh
Q 044707          290 RIN--------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFH  336 (376)
Q Consensus       290 l~D--------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~  336 (376)
                      |+|                                .+.++||||||+++|||++|+ ||.....        .       
T Consensus       181 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~-------  245 (312)
T 2iwi_A          181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------I-------  245 (312)
T ss_dssp             ECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------H-------
T ss_pred             EEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------H-------
Confidence            999                                234899999999999999999 8863211        0       


Q ss_pred             hhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 ELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                        ...... .+......+.+++.+||+.||++|||+.||+
T Consensus       246 --~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l  282 (312)
T 2iwi_A          246 --LEAELH-FPAHVSPDCCALIRRCLAPKPSSRPSLEEIL  282 (312)
T ss_dssp             --HHTCCC-CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             --hhhccC-CcccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence              001111 2233345788899999999999999999874


No 239
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=4.5e-36  Score=293.91  Aligned_cols=165  Identities=16%  Similarity=0.176  Sum_probs=134.9

Q ss_pred             cCCCC-CceecCCCCEEEEEEEEcC--CcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCceeeeeeEec--CCceEEEe
Q 044707          147 DKFTT-KALMGECKNYVGYLGYLSE--YHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNILGLLGYHQS--DSASVLVY  220 (376)
Q Consensus       147 ~~f~~-~~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lv~  220 (376)
                      +.|.. +++||+|+||.||+|.+.+  +++.||||++..... ..+.+|+.+|++++||||+++++++..  ....++||
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            33554 5689999999999999763  468899999986554 788999999999999999999999954  67789999


Q ss_pred             ecCCCCCHhhhcCCC-----CCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEE----eCCCCeEEc
Q 044707          221 PHPREGTLDNMLCPS-----PHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFL----RHDLRPMRI  291 (376)
Q Consensus       221 e~~~~gsL~~~l~~~-----~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl----~~~~~~kl~  291 (376)
                      ||+.+ +|.+++...     ......+++..+..|+.||+.||.|||+.    +|+||||||+|||+    +.++.+||+
T Consensus       100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~kl~  174 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN----WVLHRDLKPANILVMGEGPERGRVKIA  174 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred             eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC----CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence            99974 888777421     01233599999999999999999999999    99999999999999    677899999


Q ss_pred             c-------------------------------------CCCcchhhhHHHHHHHHHhCC-CCC
Q 044707          292 N-------------------------------------AITKIRCLLFGVLLLRLFCRR-SMP  316 (376)
Q Consensus       292 D-------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~  316 (376)
                      |                                     ++.++|||||||++|||++|+ ||.
T Consensus       175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  237 (405)
T 3rgf_A          175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  237 (405)
T ss_dssp             CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence            9                                     677899999999999999999 885


No 240
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=4.9e-36  Score=289.34  Aligned_cols=223  Identities=15%  Similarity=0.158  Sum_probs=173.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCC-----------CCCceeeeeeEec
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMR-----------HKNILGLLGYHQS  212 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~-----------h~nIv~l~~~~~~  212 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....  ..+.+|+.++.+++           |+||+++++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            3578888999999999999999988889999999986543  67889999999886           8999999999886


Q ss_pred             CC----ceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC----
Q 044707          213 DS----ASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH----  284 (376)
Q Consensus       213 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~----  284 (376)
                      .+    ..++||||+ +++|.+++..  .....+++..+..|+.||+.||.|||+.+   +|+||||||+|||++.    
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---~ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKK--YEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETT
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHH--hhccCCcHHHHHHHHHHHHHHHHHHHhcC---CEEecCCChHHeEEeccCCC
Confidence            54    689999999 8899999964  34456999999999999999999999953   7999999999999953    


Q ss_pred             --CCCeEEcc------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh--------hHH
Q 044707          285 --DLRPMRIN------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR--------SLI  323 (376)
Q Consensus       285 --~~~~kl~D------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~--------~l~  323 (376)
                        .+.+||+|                              ++.++|||||||++|||++|+ ||.....        .+.
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  251 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  251 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             cCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence              34789999                              688999999999999999999 8863221        111


Q ss_pred             HHHHHHhh--------hhhh----------------------hhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCcc
Q 044707          324 EWARPLML--------QRKF----------------------HELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMS  373 (376)
Q Consensus       324 ~~~~~~~~--------~~~~----------------------~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  373 (376)
                      ... ....        .+..                      ...+.... ..+......+.+|+.+||+.||++|||+.
T Consensus       252 ~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  329 (373)
T 1q8y_A          252 QII-ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY-KFSKDEAKEISDFLSPMLQLDPRKRADAG  329 (373)
T ss_dssp             HHH-HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTT-CCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHH-HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcc-cCCcchHHHHHHHHHHHhccCccccCCHH
Confidence            111 0000        0000                      00000011 13456778899999999999999999999


Q ss_pred             ccC
Q 044707          374 EVL  376 (376)
Q Consensus       374 evl  376 (376)
                      ||+
T Consensus       330 ell  332 (373)
T 1q8y_A          330 GLV  332 (373)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            874


No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1e-36  Score=289.16  Aligned_cols=206  Identities=16%  Similarity=0.219  Sum_probs=172.8

Q ss_pred             HhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---------HHHHHHHHHHhcCC--CCCceeeeeeEecC
Q 044707          145 ITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---------SILEAEKKAAWSMR--HKNILGLLGYHQSD  213 (376)
Q Consensus       145 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~E~~~l~~l~--h~nIv~l~~~~~~~  213 (376)
                      ..++|...+.||+|+||.||+|.+..+++.||||++.....         ..+.+|+.++++++  |+||+++++++...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            35678889999999999999999988889999999865432         45668999999996  59999999999999


Q ss_pred             CceEEEeecCCC-CCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEe-CCCCeEEc
Q 044707          214 SASVLVYPHPRE-GTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLR-HDLRPMRI  291 (376)
Q Consensus       214 ~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~-~~~~~kl~  291 (376)
                      +..++||||+.+ ++|.+++.    ....+++..+..++.|++.||.|||+.    +|+||||||+|||++ .++.+||+
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~kL~  192 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHCHNC----GVLHRDIKDENILIDLNRGELKLI  192 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTTEEEEC
T ss_pred             CcEEEEEEcCCCCccHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC----CcEeCCCCHHHEEEeCCCCCEEEe
Confidence            999999999976 89999994    346799999999999999999999999    999999999999999 78899999


Q ss_pred             c--------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhh
Q 044707          292 N--------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       292 D--------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~  338 (376)
                      |                                .+.++||||||+++|||++|+ ||.....        .. .+     
T Consensus       193 Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~-~~-----  258 (320)
T 3a99_A          193 DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------II-RG-----  258 (320)
T ss_dssp             CCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HH-HC-----
T ss_pred             eCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------hh-cc-----
Confidence            9                                256789999999999999999 8863211        00 00     


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                         ... .+......+.+++.+||+.||++|||+.+|+
T Consensus       259 ---~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  292 (320)
T 3a99_A          259 ---QVF-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ  292 (320)
T ss_dssp             ---CCC-CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ---ccc-ccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence               000 1222345788899999999999999999874


No 242
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1.4e-36  Score=296.71  Aligned_cols=223  Identities=16%  Similarity=0.159  Sum_probs=166.2

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCCceeeeeeEecCCc------eEEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKNILGLLGYHQSDSA------SVLV  219 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------~~lv  219 (376)
                      ...|...+.||+|+||.||+|.+..++. ||+|++.... ....+|+.+++.++||||+++++++...+.      .++|
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~-~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv  116 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK-RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV  116 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT-TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc-chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence            3458888999999999999999988744 8888886443 233479999999999999999999865433      7899


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEe-CCCCeEEcc------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLR-HDLRPMRIN------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~-~~~~~kl~D------  292 (376)
                      |||++++.+ +.+.........+++..+..++.||+.||.|||+.    +|+||||||+|||++ .++.+||+|      
T Consensus       117 ~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          117 LEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI----GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             eeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            999987543 33321102346799999999999999999999999    999999999999999 799999999      


Q ss_pred             ---------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChh--hHHHHHHHHhhhh---hh----
Q 044707          293 ---------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYR--SLIEWARPLMLQR---KF----  335 (376)
Q Consensus       293 ---------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~--~l~~~~~~~~~~~---~~----  335 (376)
                                                 ++.++|||||||++|||++|+ ||.....  .+..... .....   .+    
T Consensus       192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~-~~g~p~~~~~~~~~  270 (394)
T 4e7w_A          192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIK-VLGTPSREQIKTMN  270 (394)
T ss_dssp             CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-HHCCCCHHHHHHHC
T ss_pred             ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HhCCCCHHHHHhhC
Confidence                                       678999999999999999999 8863321  1111111 10000   00    


Q ss_pred             hhhccccCC---C------CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          336 HELLEEDLD---F------SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       336 ~~~~d~~~~---~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .......+.   .      .......++.+|+.+||+.||.+|||+.|++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  320 (394)
T 4e7w_A          271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEAL  320 (394)
T ss_dssp             GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHh
Confidence            000011110   0      1222446788999999999999999998864


No 243
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=6e-36  Score=282.44  Aligned_cols=210  Identities=14%  Similarity=0.148  Sum_probs=170.0

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----HHHHHHHHHHhcCC--CCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----SILEAEKKAAWSMR--HKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||++.+.. ++.||||++.....     +.+.+|+.++.+++  |+||+++++++...+..++
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l  105 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  105 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred             cceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence            5668888999999999999999865 58899999865432     67889999999997  5999999999999999999


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||| +.+++|.+++..    ...+++..+..++.|++.||.|||+.    +|+||||||+|||+++ +.+||+|      
T Consensus       106 v~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~  175 (313)
T 3cek_A          106 VME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIVD-GMLKLIDFGIANQ  175 (313)
T ss_dssp             EEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred             EEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCcccEEEEC-CeEEEeecccccc
Confidence            999 567899999953    45789999999999999999999999    9999999999999975 7899998      


Q ss_pred             ----------------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhh
Q 044707          293 ----------------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLML  331 (376)
Q Consensus       293 ----------------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~  331 (376)
                                                              ++.++||||||+++|||++|+ ||......... .     
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~-----  249 (313)
T 3cek_A          176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-L-----  249 (313)
T ss_dssp             --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH-H-----
T ss_pred             ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH-H-----
Confidence                                                    123789999999999999999 88633222111 1     


Q ss_pred             hhhhhhhccccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          332 QRKFHELLEEDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       332 ~~~~~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                          ...+++.... .+......+.+++.+||+.||++|||+.||+
T Consensus       250 ----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  291 (313)
T 3cek_A          250 ----HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL  291 (313)
T ss_dssp             ----HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             ----HHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHh
Confidence                1111211111 2222345788888999999999999999874


No 244
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=6.7e-36  Score=309.83  Aligned_cols=212  Identities=13%  Similarity=0.151  Sum_probs=173.1

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcC---CcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCceEE
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSE---YHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .++|...+.||+|+||.||+|.+..   .+..||+|.+.....    +.+.+|+.++++++||||+++++++. .+..++
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l  467 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI  467 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence            4567888999999999999999854   246899999876433    67889999999999999999999985 456899


Q ss_pred             EeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc------
Q 044707          219 VYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN------  292 (376)
Q Consensus       219 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D------  292 (376)
                      ||||+++|+|.+++..   ....+++..+..++.|++.||.|||+.    +|+||||||+|||++.++.+||+|      
T Consensus       468 v~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~----givHrDikp~NILl~~~~~vkL~DFG~a~~  540 (656)
T 2j0j_A          468 IMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRY  540 (656)
T ss_dssp             EEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred             EEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC----CccccccchHhEEEeCCCCEEEEecCCCee
Confidence            9999999999999963   345699999999999999999999999    999999999999999999999999      


Q ss_pred             ----------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhhcccc
Q 044707          293 ----------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHELLEED  342 (376)
Q Consensus       293 ----------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~  342 (376)
                                                  ++.++|||||||++|||++ |. ||......  +... ....+        .
T Consensus       541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~-~i~~~--------~  609 (656)
T 2j0j_A          541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIG-RIENG--------E  609 (656)
T ss_dssp             CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH-HHHHT--------C
T ss_pred             cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHH-HHHcC--------C
Confidence                                        5678999999999999997 87 87633221  1111 11111        1


Q ss_pred             CCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          343 LDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       343 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ....+......+.+++.+||+.||++|||+.+|+
T Consensus       610 ~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~  643 (656)
T 2j0j_A          610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK  643 (656)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            1112334456788999999999999999999874


No 245
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=2.3e-35  Score=291.82  Aligned_cols=213  Identities=17%  Similarity=0.180  Sum_probs=162.5

Q ss_pred             CCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEEeecCCCCC
Q 044707          149 FTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLVYPHPREGT  227 (376)
Q Consensus       149 f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  227 (376)
                      |...+.||+|+||+||.+... +++.||||++.....+.+.+|+.++.++ +||||+++++++.+.+..+|||||+. |+
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs   94 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN   94 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred             eeccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence            445678999999999876544 4589999999876667788999999876 89999999999999999999999996 69


Q ss_pred             HhhhcCCCCCCCCC---CCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCC-------------CCeEEc
Q 044707          228 LDNMLCPSPHNELK---LKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHD-------------LRPMRI  291 (376)
Q Consensus       228 L~~~l~~~~~~~~~---l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~-------------~~~kl~  291 (376)
                      |.+++.........   .++..++.|+.||+.||.|||+.    +|+||||||+|||++.+             +.+||+
T Consensus        95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~  170 (434)
T 2rio_A           95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL----KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS  170 (434)
T ss_dssp             HHHHHHTC------------CCHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred             HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence            99999652111111   13345678999999999999999    99999999999999754             478999


Q ss_pred             c--------------------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHH
Q 044707          292 N--------------------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEW  325 (376)
Q Consensus       292 D--------------------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~  325 (376)
                      |                                            ++.++|||||||++|||++ |+ |+..........
T Consensus       171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i  250 (434)
T 2rio_A          171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI  250 (434)
T ss_dssp             CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHH
T ss_pred             ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHH
Confidence            8                                            2457999999999999999 78 876332221111


Q ss_pred             HHHHhhhhhhhhhcc-ccCCC-CChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          326 ARPLMLQRKFHELLE-EDLDF-SDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       326 ~~~~~~~~~~~~~~d-~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      .     .+    ... +.... .+.....++.+++.+||+.||.+|||+.+|+
T Consensus       251 ~-----~~----~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil  294 (434)
T 2rio_A          251 I-----RG----IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL  294 (434)
T ss_dssp             H-----HT----CCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             h-----cC----CCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHH
Confidence            1     11    111 11111 3445667899999999999999999999874


No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=3.9e-35  Score=301.57  Aligned_cols=225  Identities=15%  Similarity=0.123  Sum_probs=172.7

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEec------CCc
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQS------DSA  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~  215 (376)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....    +.+.+|+.++.+++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            3679999999999999999999988889999999876432    678899999999999999999998765      667


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCC---eEEcc
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLR---PMRIN  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~---~kl~D  292 (376)
                      .++||||+++|+|.+++... .....+++..+..|+.+++.||.|||+.    +|+||||||+|||++.++.   +||+|
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~-~~~~~lse~~i~~I~~QLl~aL~yLHs~----gIVHrDLKP~NILl~~~g~~~~vKL~D  167 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQF-ENCCGLKEGPIRTLLSDISSALRYLHEN----RIIHRDLKPENIVLQPGPQRLIHKIID  167 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSS-SCTTCCCSSHHHHHHHHHHHHHHHHHHT----TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred             EEEEEEeCCCCCHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCCHHHeEeecCCCceeEEEcc
Confidence            89999999999999999652 2234699999999999999999999999    9999999999999997765   88998


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhh---
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFH---  336 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~---  336 (376)
                                                      ++.++||||||+++|||++|. ||...... ..|...........   
T Consensus       168 FG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-~~~~~~i~~~~~~~~~~  246 (676)
T 3qa8_A          168 LGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-VQWHGKVREKSNEHIVV  246 (676)
T ss_dssp             CCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-HHSSTTCC------CCS
T ss_pred             cccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-hhhhhhhhcccchhhhh
Confidence                                            678999999999999999999 88643221 11111110000000   


Q ss_pred             -hhc------cccC---CCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          337 -ELL------EEDL---DFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       337 -~~~------d~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                       ...      ...+   ..........+.+++.+||+.||++|||+.+++
T Consensus       247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence             000      0011   113445678899999999999999999998875


No 247
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=6.8e-35  Score=288.28  Aligned_cols=213  Identities=15%  Similarity=0.155  Sum_probs=162.9

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEEeecCC
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLVYPHPR  224 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  224 (376)
                      ..+|...+.||+|+||+||..... +++.||||++.......+.+|+.+|+.+ +|||||++++++.+.+..+|||||+.
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~-~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEES-SSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             cEEEecCCeeecCcCEEEEEEEEe-CCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            345888899999999986544333 3588999999766555567899999999 79999999999999999999999996


Q ss_pred             CCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeC-----CCCeEEcc-------
Q 044707          225 EGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRH-----DLRPMRIN-------  292 (376)
Q Consensus       225 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~-----~~~~kl~D-------  292 (376)
                       |+|.+++..   ....+.+..+..|+.||+.||.|||+.    +|+||||||+|||++.     ...+||+|       
T Consensus       102 -g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          102 -ATLQEYVEQ---KDFAHLGLEPITLLQQTTSGLAHLHSL----NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             -EEHHHHHHS---SSCCCCSSCHHHHHHHHHHHHHHHHHT----TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             -CCHHHHHHh---cCCCccchhHHHHHHHHHHHHHHHHHC----cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence             599999964   233455556788999999999999999    9999999999999953     23567888       


Q ss_pred             --------------------------------CCCcchhhhHHHHHHHHHh-CC-CCCcChhhHHHHHHHHhhhhhhhhh
Q 044707          293 --------------------------------AITKIRCLLFGVLLLRLFC-RR-SMPQDYRSLIEWARPLMLQRKFHEL  338 (376)
Q Consensus       293 --------------------------------~~~~~Dv~S~Gvvl~ellt-g~-P~~~~~~~l~~~~~~~~~~~~~~~~  338 (376)
                                                      ++.++|||||||++|||++ |. |+..........   ...      .
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~---~~~------~  244 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI---LLG------A  244 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH---HTT------C
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH---Hhc------c
Confidence                                            3448999999999999999 77 775332221110   000      0


Q ss_pred             ccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          339 LEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       339 ~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      ...............+.+|+.+||+.||.+|||+.+|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl  282 (432)
T 3p23_A          245 CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVL  282 (432)
T ss_dssp             CCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHH
Confidence            00111112334455678899999999999999999874


No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4e-34  Score=298.08  Aligned_cols=201  Identities=15%  Similarity=0.148  Sum_probs=163.6

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcC-CcEEEEEEecCCCCH----HHHHHHHHHHhcCCCCCceeeeeeEecCCc-----
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSE-YHAFVLVKRFTGDSS----SILEAEKKAAWSMRHKNILGLLGYHQSDSA-----  215 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~-~~~~vavK~~~~~~~----~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-----  215 (376)
                      .++|...+.||+|+||.||+|.+.. +++.||||++.....    ..+.+|+.++.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            4779999999999999999999975 579999999875432    567899999999999999999999987665     


Q ss_pred             eEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc---
Q 044707          216 SVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN---  292 (376)
Q Consensus       216 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D---  292 (376)
                      .+|||||+++++|.+++.      ..+++.+++.|+.||+.||.|||+.    +||||||||+|||++.+ .+||+|   
T Consensus       159 ~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~----giiHrDlkp~NIll~~~-~~kl~DFG~  227 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI----GLVYNDLKPENIMLTEE-QLKLIDLGA  227 (681)
T ss_dssp             EEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred             eEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC----CCeecccChHHeEEeCC-cEEEEeccc
Confidence            699999999999998874      2699999999999999999999999    99999999999999986 899999   


Q ss_pred             -------------------------CCCcchhhhHHHHHHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCC
Q 044707          293 -------------------------AITKIRCLLFGVLLLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFS  346 (376)
Q Consensus       293 -------------------------~~~~~Dv~S~Gvvl~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~  346 (376)
                                               .+.++|||||||++++|++|. |+.....                ..+..  ...
T Consensus       228 a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------~~~~~--~~~  289 (681)
T 2pzi_A          228 VSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYV----------------DGLPE--DDP  289 (681)
T ss_dssp             CEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEEC----------------SSCCT--TCH
T ss_pred             chhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccc----------------ccccc--ccc
Confidence                                     466899999999999999999 5541110                00000  001


Q ss_pred             ChHHHHHHHHHHHHccccCCCCCCCcccc
Q 044707          347 DMHGIYRVMAAATQCTISKPTSRPCMSEV  375 (376)
Q Consensus       347 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  375 (376)
                      .......+.+|+.+||+.||++||+..+.
T Consensus       290 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~  318 (681)
T 2pzi_A          290 VLKTYDSYGRLLRRAIDPDPRQRFTTAEE  318 (681)
T ss_dssp             HHHHCHHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred             ccccCHHHHHHHhhhccCChhhCCCHHHH
Confidence            11233578889999999999999976543


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=3.7e-33  Score=274.24  Aligned_cols=210  Identities=11%  Similarity=0.055  Sum_probs=156.8

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH------HHHHHHHHHHhcCCC-CCceee------------
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS------SILEAEKKAAWSMRH-KNILGL------------  206 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~h-~nIv~l------------  206 (376)
                      +.+|...++||+|+||.||+|.+..+++.||||++.....      +.+.+|+.++..++| .|...+            
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            3456677899999999999999998889999999883332      778999999999987 322111            


Q ss_pred             ---------eeeEec-----CCceEEEeecCCCCCHhhhcCCC---CCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCC
Q 044707          207 ---------LGYHQS-----DSASVLVYPHPREGTLDNMLCPS---PHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGP  269 (376)
Q Consensus       207 ---------~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~  269 (376)
                               ..++..     ....+++|+++ +++|.+++...   ......+++..++.|+.|++.||.|||+.    +
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~  231 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY----G  231 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC----C
Confidence                     111111     22356777765 57999988410   03345688999999999999999999999    9


Q ss_pred             eeecCCCCCcEEEeCCCCeEEccC---------------------------------------CCcchhhhHHHHHHHHH
Q 044707          270 IAHGELQLHNIFLRHDLRPMRINA---------------------------------------ITKIRCLLFGVLLLRLF  310 (376)
Q Consensus       270 iiH~Dlkp~NILl~~~~~~kl~D~---------------------------------------~~~~Dv~S~Gvvl~ell  310 (376)
                      |+||||||+|||++.++.+||+|+                                       +.++|||||||++|||+
T Consensus       232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell  311 (413)
T 3dzo_A          232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW  311 (413)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred             cccCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence            999999999999999999999991                                       12899999999999999


Q ss_pred             hCC-CCCcChhhHHHHHHHHhhhhhhhhhccccCCCCChHHHHHHHHHHHHccccCCCCCCCccccC
Q 044707          311 CRR-SMPQDYRSLIEWARPLMLQRKFHELLEEDLDFSDMHGIYRVMAAATQCTISKPTSRPCMSEVL  376 (376)
Q Consensus       311 tg~-P~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  376 (376)
                      +|+ ||......           .....++..     ....+..+.+|+.+||+.||++|||+.+++
T Consensus       312 tg~~Pf~~~~~~-----------~~~~~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          312 CADLPNTDDAAL-----------GGSEWIFRS-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             HSSCCCCTTGGG-----------SCSGGGGSS-----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HCCCCCCCcchh-----------hhHHHHHhh-----cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            999 88632211           011111111     112235788899999999999999998875


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97  E-value=1.5e-32  Score=261.95  Aligned_cols=209  Identities=11%  Similarity=0.066  Sum_probs=156.5

Q ss_pred             hcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----------HHHHHHHHHHhcCC---------CCCcee
Q 044707          146 TDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----------SILEAEKKAAWSMR---------HKNILG  205 (376)
Q Consensus       146 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~E~~~l~~l~---------h~nIv~  205 (376)
                      .++|...+.||+|+||.||+|.+.  ++.||||++.....           +.+.+|+.+++.++         |+||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIAD--HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEET--TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEeC--CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            356788899999999999999983  69999999975421           77889999988886         666666


Q ss_pred             eeee-----------------Eec-------------CCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Q 044707          206 LLGY-----------------HQS-------------DSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIA  255 (376)
Q Consensus       206 l~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~  255 (376)
                      +.+.                 +..             .+..+|||||+++|++.+.+..     ..+++..+..|+.||+
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~  171 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT  171 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence            6554                 333             6789999999999977777632     4689999999999999


Q ss_pred             HHhHHhh-hcCCCCCeeecCCCCCcEEEeCCC--------------------CeEEcc----------------------
Q 044707          256 EGVRYMH-QECPRGPIAHGELQLHNIFLRHDL--------------------RPMRIN----------------------  292 (376)
Q Consensus       256 ~gL~yLH-~~~~~~~iiH~Dlkp~NILl~~~~--------------------~~kl~D----------------------  292 (376)
                      .||.||| +.    +|+||||||+|||++.++                    .+||+|                      
T Consensus       172 ~aL~~lH~~~----~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE  247 (336)
T 2vuw_A          172 ASLAVAEASL----RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDED  247 (336)
T ss_dssp             HHHHHHHHHH----CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSG
T ss_pred             HHHHHHHHhC----CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChh
Confidence            9999999 89    999999999999999887                    899999                      


Q ss_pred             -----CCCcchhhhHHHH-HHHHHhCC-CCCcChhhHHHHHHHHhhhhhhhhh-ccccCCC-CChHHHHHHHHHHHHccc
Q 044707          293 -----AITKIRCLLFGVL-LLRLFCRR-SMPQDYRSLIEWARPLMLQRKFHEL-LEEDLDF-SDMHGIYRVMAAATQCTI  363 (376)
Q Consensus       293 -----~~~~~Dv~S~Gvv-l~elltg~-P~~~~~~~l~~~~~~~~~~~~~~~~-~d~~~~~-~~~~~~~~l~~l~~~Cl~  363 (376)
                           .+.++||||||++ .+++++|. |+...     .|..... ....... ....... .......++.+|+.+||+
T Consensus       248 ~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~  321 (336)
T 2vuw_A          248 LFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNV-----LWLHYLT-DKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLN  321 (336)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHH-----HHHHHHH-HHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGG
T ss_pred             hhcCCCccceehhhhhCCCCcccccccCCCcch-----hhhhHHH-HhhhhhhccCcccchhhhhhcCHHHHHHHHHHhc
Confidence                 4678999998777 77788898 76310     1111110 0000000 0111111 234567889999999999


Q ss_pred             cCCCCCCCccccC
Q 044707          364 SKPTSRPCMSEVL  376 (376)
Q Consensus       364 ~dP~~RPs~~evl  376 (376)
                      .|     |+.|+|
T Consensus       322 ~d-----sa~e~l  329 (336)
T 2vuw_A          322 FS-----SATDLL  329 (336)
T ss_dssp             SS-----SHHHHH
T ss_pred             cC-----CHHHHH
Confidence            76     777753


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92  E-value=3.9e-25  Score=225.37  Aligned_cols=149  Identities=14%  Similarity=0.055  Sum_probs=117.9

Q ss_pred             eecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-------------HHHHHHHHHHhcC-CCCCceeeeeeEecCCceEEE
Q 044707          154 LMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-------------SILEAEKKAAWSM-RHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       154 ~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      .++.|++|.+..+.....++.+|+|++.....             ++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            45677777766665555567899999975421             6789999999999 699999999999999999999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------  292 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------  292 (376)
                      |||++||+|.++|..    ...++..   .|+.||+.||+|||++    +||||||||+||||+.+|.+||+|       
T Consensus       321 MEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~----GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~  389 (569)
T 4azs_A          321 MEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ----GFWHDDVRPWNVMVDARQHARLIDFGSIVTT  389 (569)
T ss_dssp             EECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT----TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred             EecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC----CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence            999999999999953    4567764   4889999999999999    999999999999999999999999       


Q ss_pred             ----CCCcchhhhHHHHHHHHHhCC
Q 044707          293 ----AITKIRCLLFGVLLLRLFCRR  313 (376)
Q Consensus       293 ----~~~~~Dv~S~Gvvl~elltg~  313 (376)
                          ....+++|+.|.+..|+++|+
T Consensus       390 ~~~~~~~~t~vGTp~YmAPE~l~g~  414 (569)
T 4azs_A          390 PQDCSWPTNLVQSFFVFVNELFAEN  414 (569)
T ss_dssp             C---CCSHHHHHHHHHHHHHHC---
T ss_pred             CCCCccccCceechhhccHHHhCCC
Confidence                234567888888888888877


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88  E-value=1e-22  Score=206.40  Aligned_cols=123  Identities=15%  Similarity=0.088  Sum_probs=99.9

Q ss_pred             CCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----------HHHHHHHHHHhcCCCCCceeeeeeEecCCceEEE
Q 044707          151 TKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----------SILEAEKKAAWSMRHKNILGLLGYHQSDSASVLV  219 (376)
Q Consensus       151 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  219 (376)
                      ..++||+|+||.||+|...  +..+++|+......           +.+.+|++++++++||||+++..++...+..+||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             --------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            3578999999999999554  47788888654321           4478999999999999999777776777888999


Q ss_pred             eecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEccC
Q 044707          220 YPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRINA  293 (376)
Q Consensus       220 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D~  293 (376)
                      |||+++|+|.+++..            +..|+.|++.||.|||+.    +|+||||||+|||++.  .+||+|+
T Consensus       418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~----gIiHrDiKp~NILl~~--~~kL~DF  473 (540)
T 3en9_A          418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN----DVIHNDLTTSNFIFDK--DLYIIDF  473 (540)
T ss_dssp             EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT----TEECTTCCTTSEEESS--SEEECCC
T ss_pred             EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC----cCccCCCCHHHEEECC--eEEEEEC
Confidence            999999999999952            568999999999999999    9999999999999998  9999993


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86  E-value=1.4e-21  Score=182.20  Aligned_cols=139  Identities=17%  Similarity=0.086  Sum_probs=111.7

Q ss_pred             ccHHHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCC---------------------HHHHHHHHHHH
Q 044707          137 LSWEVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS---------------------SSILEAEKKAA  195 (376)
Q Consensus       137 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------------------~~~~~~E~~~l  195 (376)
                      +.+..+......|...+.||+|+||.||+|.+ .+++.||||.+....                     ...+.+|+.++
T Consensus        80 ~~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l  158 (282)
T 1zar_A           80 YSLHRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRAL  158 (282)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHH
Confidence            34445555556677779999999999999999 667999999996432                     14578999999


Q ss_pred             hcCCCCCceeeeeeEecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCC
Q 044707          196 WSMRHKNILGLLGYHQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGEL  275 (376)
Q Consensus       196 ~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dl  275 (376)
                      ++++  | +++.+++.. +..++||||+++|+|.+ +..          .....++.|++.||.|||+.    +|+||||
T Consensus       159 ~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~----giiHrDl  219 (282)
T 1zar_A          159 QKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR----GIVHGDL  219 (282)
T ss_dssp             HHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT----TEECSCC
T ss_pred             Hhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC----CCEeCCC
Confidence            9998  5 666665443 56699999999999998 521          12446999999999999999    9999999


Q ss_pred             CCCcEEEeCCCCeEEccCCCc
Q 044707          276 QLHNIFLRHDLRPMRINAITK  296 (376)
Q Consensus       276 kp~NILl~~~~~~kl~D~~~~  296 (376)
                      ||+|||++ ++.+||+|++.+
T Consensus       220 kp~NILl~-~~~vkl~DFG~a  239 (282)
T 1zar_A          220 SQYNVLVS-EEGIWIIDFPQS  239 (282)
T ss_dssp             STTSEEEE-TTEEEECCCTTC
T ss_pred             CHHHEEEE-CCcEEEEECCCC
Confidence            99999999 999999995543


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77  E-value=2.8e-19  Score=164.25  Aligned_cols=133  Identities=17%  Similarity=0.079  Sum_probs=103.7

Q ss_pred             CCCCceecCCCCEEEEEEEEcCCcEE--EEEEecCCCCH---------------------------HHHHHHHHHHhcCC
Q 044707          149 FTTKALMGECKNYVGYLGYLSEYHAF--VLVKRFTGDSS---------------------------SILEAEKKAAWSMR  199 (376)
Q Consensus       149 f~~~~~lG~G~fg~Vy~~~~~~~~~~--vavK~~~~~~~---------------------------~~~~~E~~~l~~l~  199 (376)
                      |...+.||+|+||.||+|.+..+++.  ||||+++....                           ..+.+|+.+|..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678899999999999998555688  99998754311                           25788999999998


Q ss_pred             CCCc--eeeeeeEecCCceEEEeecCCC-C----CHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhh-hcCCCCCee
Q 044707          200 HKNI--LGLLGYHQSDSASVLVYPHPRE-G----TLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMH-QECPRGPIA  271 (376)
Q Consensus       200 h~nI--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH-~~~~~~~ii  271 (376)
                      |+++  ..++++    +..+|||||+.+ |    +|.+....       .++..+..++.|++.||.||| +.    +|+
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~----giv  193 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA----ELV  193 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS----CEE
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC----CEE
Confidence            8764  344442    356899999942 4    67766531       234567889999999999999 88    999


Q ss_pred             ecCCCCCcEEEeCCCCeEEccCCCcch
Q 044707          272 HGELQLHNIFLRHDLRPMRINAITKIR  298 (376)
Q Consensus       272 H~Dlkp~NILl~~~~~~kl~D~~~~~D  298 (376)
                      ||||||+|||++.  .++|+|++.+..
T Consensus       194 HrDlkp~NILl~~--~~~liDFG~a~~  218 (258)
T 1zth_A          194 HADLSEYNIMYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             CSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred             eCCCCHHHEEEcC--cEEEEECccccc
Confidence            9999999999998  999999766543


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70  E-value=4.8e-18  Score=163.81  Aligned_cols=141  Identities=10%  Similarity=0.047  Sum_probs=100.3

Q ss_pred             HHHHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-----------------HHH--------HHHHHH
Q 044707          140 EVIMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-----------------SIL--------EAEKKA  194 (376)
Q Consensus       140 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----------------~~~--------~~E~~~  194 (376)
                      ..+..-..-|.....||.|+||.||+|.... |+.||||+++....                 ...        ..|...
T Consensus        88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~-G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~n  166 (397)
T 4gyi_A           88 HTHAARKDVYSVGSRIGVGKESDIMIVADEK-GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAF  166 (397)
T ss_dssp             HHHHHTTSCSEEEEEEEECSSEEEEEEECTT-CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCEEEecCEeeeCCceEEEEEECCC-CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            3344333448889999999999999999865 58899998753210                 111        345666


Q ss_pred             HhcCCCCCce--eeeeeEecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeee
Q 044707          195 AWSMRHKNIL--GLLGYHQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAH  272 (376)
Q Consensus       195 l~~l~h~nIv--~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH  272 (376)
                      |.++.+.++.  ..+++    ...+|||||+.+++|.++...          .....++.|++.+|.|||..    +|||
T Consensus       167 L~rL~~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~----gIVH  228 (397)
T 4gyi_A          167 MKALYEEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH----GLIH  228 (397)
T ss_dssp             HHHHHHTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT----TEEC
T ss_pred             HHHHHhcCCCCCeeeec----cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC----CCcC
Confidence            6666443332  22221    223799999999998776521          12356889999999999999    9999


Q ss_pred             cCCCCCcEEEeCCCC----------eEEccCCCcchh
Q 044707          273 GELQLHNIFLRHDLR----------PMRINAITKIRC  299 (376)
Q Consensus       273 ~Dlkp~NILl~~~~~----------~kl~D~~~~~Dv  299 (376)
                      |||||.|||++.++.          +.|+|+...+++
T Consensus       229 rDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          229 GDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             SCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             CCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            999999999998773          789995555443


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.34  E-value=3.3e-12  Score=116.61  Aligned_cols=156  Identities=15%  Similarity=0.074  Sum_probs=117.3

Q ss_pred             HHHHhcCCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCC---CCHHHHHHHHHHHhcCC-CCCceeeeeeEecCCceE
Q 044707          142 IMEITDKFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTG---DSSSILEAEKKAAWSMR-HKNILGLLGYHQSDSASV  217 (376)
Q Consensus       142 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~  217 (376)
                      +....++|.....++.|+.+.||++...  +..+++|+...   .....+.+|+.+++.+. +.++.++++++...+..+
T Consensus         9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~   86 (263)
T 3tm0_A            9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence            3455677887788888999999999754  47899999875   22356889999999885 677889999999888999


Q ss_pred             EEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC--------------------------------
Q 044707          218 LVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQEC--------------------------------  265 (376)
Q Consensus       218 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~--------------------------------  265 (376)
                      +||||++|.+|.+.+..         ......++.+++.+|..||+..                                
T Consensus        87 lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN  157 (263)
T ss_dssp             EEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred             EEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence            99999999999887521         1223467889999999999810                                


Q ss_pred             ------------------------CCCCeeecCCCCCcEEEeCCCCeEEccCCCc--ch-hhhHHHHHHHH
Q 044707          266 ------------------------PRGPIAHGELQLHNIFLRHDLRPMRINAITK--IR-CLLFGVLLLRL  309 (376)
Q Consensus       266 ------------------------~~~~iiH~Dlkp~NILl~~~~~~kl~D~~~~--~D-v~S~Gvvl~el  309 (376)
                                              +. .++|+|++|.|||++.+..+.|.|+...  .| .|=++.++..+
T Consensus       158 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd~~~Dla~~~~~~  227 (263)
T 3tm0_A          158 WEEDTPFKDPRELYDFLKTEKPEEEL-VFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSI  227 (263)
T ss_dssp             GSTTCSSSSHHHHHHHHHHCCCCCCE-EEECSSCCTTSEEEETTEEEEECCCTTCEEEEHHHHHHHHHHHH
T ss_pred             ccccccCCCHHHHHHHHHhcCCCCCc-eEECCCCCcCcEEEECCcEEEEEEchhcccCCHHHHHHHHHHHh
Confidence                                    02 5999999999999987666679994322  22 34455555433


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.15  E-value=5.9e-11  Score=107.52  Aligned_cols=139  Identities=14%  Similarity=0.046  Sum_probs=99.0

Q ss_pred             cCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCC--ceeeeeeEecCCceEEEeecCCCCCHhhhcC
Q 044707          156 GECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKN--ILGLLGYHQSDSASVLVYPHPREGTLDNMLC  233 (376)
Q Consensus       156 G~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~  233 (376)
                      +.|..+.||++...+ +..+++|.........+..|+.+++.+.+.+  +.+++++...++..++||||++|.+|.  ..
T Consensus        29 ~gg~~~~v~~~~~~~-g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~  105 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQG-RPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS  105 (264)
T ss_dssp             CTTSSCEEEEEECTT-SCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TS
T ss_pred             cCCCCceEEEEecCC-CCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cC
Confidence            455569999997643 4679999987654356788999998886444  456888888888889999999998884  31


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC------------------------------------------------
Q 044707          234 PSPHNELKLKFQQKLKIAIGIAEGVRYMHQEC------------------------------------------------  265 (376)
Q Consensus       234 ~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~------------------------------------------------  265 (376)
                      .       ..   ...++.+++..|..||...                                                
T Consensus       106 ~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  175 (264)
T 1nd4_A          106 H-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK  175 (264)
T ss_dssp             C-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred             c-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence            1       11   2356777888888888742                                                


Q ss_pred             -------CCCCeeecCCCCCcEEEeCCCCeEEccCCC---cchhhhHHHHHHH
Q 044707          266 -------PRGPIAHGELQLHNIFLRHDLRPMRINAIT---KIRCLLFGVLLLR  308 (376)
Q Consensus       266 -------~~~~iiH~Dlkp~NILl~~~~~~kl~D~~~---~~Dv~S~Gvvl~e  308 (376)
                             +. .++|+|++|.|||++.++.+.|.|+..   .--.|-++.++..
T Consensus       176 ~~~~~~~~~-~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~~~~Dla~~~~~  227 (264)
T 1nd4_A          176 ARMPDGEDL-VVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRD  227 (264)
T ss_dssp             HTCCSSCCE-EEECSSCCGGGEEEETTEEEEECCCTTCEEEETHHHHHHHHHH
T ss_pred             HhcCCCCCe-EEECCCCCCCcEEEECCcEEEEEcchhcccCChHHHHHHHHhh
Confidence                   11 399999999999998876677999433   2223445555443


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.06  E-value=4.9e-10  Score=107.07  Aligned_cols=132  Identities=8%  Similarity=0.062  Sum_probs=101.4

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEEEecC--CCC----HHHHHHHHHHHhcCC--CCCceeeeeeEecC---CceEEEe
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLVKRFT--GDS----SSILEAEKKAAWSMR--HKNILGLLGYHQSD---SASVLVY  220 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~--~~~----~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~---~~~~lv~  220 (376)
                      .+.|+.|.++.||+....+  ..+++|+..  ...    ...+.+|+.+++.|.  +.++.++++++.+.   +..++||
T Consensus        43 ~~~l~~G~sn~~y~v~~~~--~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPG--QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEECCC-CCSCEEEEECSS--CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             EEEcCCcccceEEEEEECC--ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            4578999999999988653  578889886  332    256788999999887  45678899888776   4479999


Q ss_pred             ecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-----------------------------------
Q 044707          221 PHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQEC-----------------------------------  265 (376)
Q Consensus       221 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------------------------  265 (376)
                      ||++|..+.+..      ...++..++..++.+++..|..||...                                   
T Consensus       121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            999998775432      134788888999999999999999831                                   


Q ss_pred             --------------------CCCCeeecCCCCCcEEEeCCCC--eEEcc
Q 044707          266 --------------------PRGPIAHGELQLHNIFLRHDLR--PMRIN  292 (376)
Q Consensus       266 --------------------~~~~iiH~Dlkp~NILl~~~~~--~kl~D  292 (376)
                                          +. .++|+|+++.|||++.++.  +.|.|
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~-~lvHgD~~~~Nil~~~~~~~v~~viD  242 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLT-SIVHGDYRLDNLMFHPTEPRVLAVLD  242 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCC-EEECSSCSGGGEEECSSSSCEEEECC
T ss_pred             hHHHHHHHHHHhcCCCccCCCc-eEEeCCCCCCcEEEeCCCCcEEEEEC
Confidence                                13 7999999999999997753  58889


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77  E-value=1.1e-08  Score=95.29  Aligned_cols=128  Identities=15%  Similarity=0.062  Sum_probs=92.9

Q ss_pred             ceecCCCCEEEEEEEEcCCcEEEEEEecCCCC-HHHHHHHHHHHhcCC-CCC--ceeeeeeEecCC---ceEEEeecCCC
Q 044707          153 ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS-SSILEAEKKAAWSMR-HKN--ILGLLGYHQSDS---ASVLVYPHPRE  225 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~E~~~l~~l~-h~n--Iv~l~~~~~~~~---~~~lv~e~~~~  225 (376)
                      +.++.|....||+..     ..+++|+..... ...+.+|..+|+.+. +..  +.+++++....+   ..++||++++|
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G  100 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG  100 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence            568999999999863     348889876542 267889999998873 333  345555443333   34889999999


Q ss_pred             CCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC----------------------------------------
Q 044707          226 GTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQEC----------------------------------------  265 (376)
Q Consensus       226 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------------------------------  265 (376)
                      .+|.+...      ..++..++..++.+++..|..||+..                                        
T Consensus       101 ~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A          101 VPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             EECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             eECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            88865432      24677778888888888888888611                                        


Q ss_pred             ---------------CCCCeeecCCCCCcEEEeC--CCCeEEcc
Q 044707          266 ---------------PRGPIAHGELQLHNIFLRH--DLRPMRIN  292 (376)
Q Consensus       266 ---------------~~~~iiH~Dlkp~NILl~~--~~~~kl~D  292 (376)
                                     ++ .++|+|++|.||+++.  +..+.|.|
T Consensus       175 ~~~~~~l~~~~~~~~~~-~~~HgD~~~~N~l~~~~~~~~~~~iD  217 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYP-CLIHNDFSSDHILFDTEKNTICGIID  217 (304)
T ss_dssp             HHHHHHHTCGGGTCCCC-EEECSCCCGGGEEEETTTTEEEEECC
T ss_pred             HHHHHHHhccccccCCc-eeEeCCCCcccEEEeCCCCCEEEEEe
Confidence                           12 5899999999999998  45567888


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.66  E-value=1.4e-07  Score=88.69  Aligned_cols=130  Identities=15%  Similarity=0.065  Sum_probs=96.2

Q ss_pred             CCCCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCC----CCceeeeeeEecCCceEEEeec
Q 044707          148 KFTTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRH----KNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       148 ~f~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h----~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      .....+.++.|..+.||+.     +..+++|+...... ..+.+|..+|..+.+    ..+.+++++    +..++||||
T Consensus        38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~  108 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY  108 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred             ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence            4455678999999999998     24588898765442 678899998888865    224455554    566899999


Q ss_pred             CCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-----------------------------------
Q 044707          223 PREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPR-----------------------------------  267 (376)
Q Consensus       223 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~-----------------------------------  267 (376)
                      ++|.++.....      ..++..+...++.+++..|..||+...+                                   
T Consensus       109 i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (320)
T 3r70_A          109 IKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT  182 (320)
T ss_dssp             CCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             cCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence            99988864331      2356777778888888888888854221                                   


Q ss_pred             ------------------------CCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          268 ------------------------GPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       268 ------------------------~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                                              ..++|+|++|.|||++.+..+.|.|
T Consensus       183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD  231 (320)
T 3r70_A          183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVID  231 (320)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECC
T ss_pred             ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEEC
Confidence                                    0459999999999999866678999


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.44  E-value=6.1e-07  Score=81.67  Aligned_cols=131  Identities=13%  Similarity=0.028  Sum_probs=94.8

Q ss_pred             eecCCCCE-EEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCC-CCCceeeeeeEecCCceEEEeecCCCCCHhhh
Q 044707          154 LMGECKNY-VGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMR-HKNILGLLGYHQSDSASVLVYPHPREGTLDNM  231 (376)
Q Consensus       154 ~lG~G~fg-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~  231 (376)
                      .+..|..| .||+.....++..+++|+-.......+.+|...|+.+. +-.+.++++++.+.+..++|||++++.++.+.
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~  110 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV  110 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence            45556555 69998877666789999887665577889999998875 34467889999999999999999999887765


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCC---------------------------------------------
Q 044707          232 LCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECP---------------------------------------------  266 (376)
Q Consensus       232 l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------------------------------  266 (376)
                      ...        .......+..+++..|.-||....                                             
T Consensus       111 ~~~--------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T 4gkh_A          111 LEE--------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE  182 (272)
T ss_dssp             HHH--------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred             ccC--------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence            421        112233455566666666664210                                             


Q ss_pred             ---------CCCeeecCCCCCcEEEeCCCCeEEcc
Q 044707          267 ---------RGPIAHGELQLHNIFLRHDLRPMRIN  292 (376)
Q Consensus       267 ---------~~~iiH~Dlkp~NILl~~~~~~kl~D  292 (376)
                               +..++|+|+.+.|||++.++.+-|.|
T Consensus       183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viD  217 (272)
T 4gkh_A          183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCID  217 (272)
T ss_dssp             HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECC
T ss_pred             HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEE
Confidence                     00489999999999999877777889


No 262
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.41  E-value=2.1e-06  Score=82.09  Aligned_cols=74  Identities=8%  Similarity=-0.030  Sum_probs=56.4

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCC--ceeeeeeEecC-CceEEEeecCCCCCH
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKN--ILGLLGYHQSD-SASVLVYPHPREGTL  228 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~-~~~~lv~e~~~~gsL  228 (376)
                      .+.|+.|....+|+....  +..+++|.....  ..+..|..++..+....  +.++++++... +..++||||++|.++
T Consensus        46 i~~l~gG~~n~~y~v~~~--g~~~vlK~~~~~--~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l  121 (362)
T 3ovc_A           46 LMQLSEGEESRAFSFDVG--GRGYVLRVNSCA--DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL  121 (362)
T ss_dssp             EEEEEECSSEEEEEEEET--TEEEEEEEESCC--HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred             EEECCCCCcceEEEEEEC--CcEEEEEeCCch--hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence            456889999999998863  578999988644  46888999998886433  45677776654 668999999998665


Q ss_pred             h
Q 044707          229 D  229 (376)
Q Consensus       229 ~  229 (376)
                      .
T Consensus       122 ~  122 (362)
T 3ovc_A          122 Q  122 (362)
T ss_dssp             T
T ss_pred             c
Confidence            4


No 263
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.35  E-value=1.3e-06  Score=80.95  Aligned_cols=72  Identities=17%  Similarity=0.158  Sum_probs=57.7

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCCC---CceeeeeeEecCCceEEEeecCCC
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRHK---NILGLLGYHQSDSASVLVYPHPRE  225 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~lv~e~~~~  225 (376)
                      .+.||.|.++.||++...++ ..++||+......   ..+..|+..|+.|.+.   .+.+++++.    ..++||||+++
T Consensus        20 ~~~l~gG~~n~vy~v~~~dG-~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g   94 (288)
T 3d1u_A           20 VAERGHSHRWHLYRVELADG-TPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE   94 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTS-CEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred             eeeeCCcchhheEEEEeCCC-CeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence            46799999999999988654 7899999654322   6789999999999865   577888763    36899999998


Q ss_pred             CCH
Q 044707          226 GTL  228 (376)
Q Consensus       226 gsL  228 (376)
                      +++
T Consensus        95 ~~~   97 (288)
T 3d1u_A           95 RPP   97 (288)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            875


No 264
>3mop_K IRAK-2, interleukin-1 receptor-associated kinase-like 2; death domain complex, helical symmetry, single-stranded HELI assembly; 3.40A {Homo sapiens}
Probab=98.31  E-value=1.2e-07  Score=73.96  Aligned_cols=35  Identities=17%  Similarity=-0.017  Sum_probs=33.2

Q ss_pred             ccCCCCchhhhh----hcCccc----cccchhhhhHHHhhhCC
Q 044707           17 VSLVSNDDEAMV----HDHHLD----SYDRSEWSMIMEEMHKP   51 (376)
Q Consensus        17 ~~~~s~~~~~~~----~~~~~~----~~~~~~~~~a~~~~~~p   51 (376)
                      ++|+|||+||||    +||||+    +|.++++|+||+++++.
T Consensus        50 ~~G~SpT~eLL~~Wg~~N~TV~eL~~lL~~l~l~rA~~li~~~   92 (111)
T 3mop_K           50 VQGVSITRELLWWWGMRQATVQQLVDLLCRLELYRAAQIILNW   92 (111)
T ss_dssp             STTCCHHHHHHHHHHTTTCBSHHHHHTTTTTSCHHHHTTTTSC
T ss_pred             hcCCCcHHHHHHHHHhcCCcHHHHHHHHHHcccHhHHHHHhcc
Confidence            699999999999    999999    99999999999999964


No 265
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.25  E-value=4.2e-06  Score=78.02  Aligned_cols=128  Identities=16%  Similarity=0.066  Sum_probs=88.7

Q ss_pred             ceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH-HHHHHHHHHHhcCCCC---CceeeeeeEe-cCCceEEEeecCCCCC
Q 044707          153 ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS-SILEAEKKAAWSMRHK---NILGLLGYHQ-SDSASVLVYPHPREGT  227 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~---nIv~l~~~~~-~~~~~~lv~e~~~~gs  227 (376)
                      +.++.|....||+.     +..+++|+...... ..+.+|..+|..|.+.   .+.+++.++. ..+..++||||++|.+
T Consensus        25 ~~l~~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~   99 (306)
T 3tdw_A           25 ESLGEGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI   99 (306)
T ss_dssp             EEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred             eecCCCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence            46888888999998     24588888643322 6788999999998742   3556666664 4556789999999988


Q ss_pred             HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhc-------------------------------------------
Q 044707          228 LDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQE-------------------------------------------  264 (376)
Q Consensus       228 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~-------------------------------------------  264 (376)
                      |.+...      ..++..+...++.+++..|..||+.                                           
T Consensus       100 l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A          100 LGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             CHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             Cchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            876321      1234555555555565555555542                                           


Q ss_pred             --------------CCCCCeeecCCCCCcEEEeC---CCC-eEEcc
Q 044707          265 --------------CPRGPIAHGELQLHNIFLRH---DLR-PMRIN  292 (376)
Q Consensus       265 --------------~~~~~iiH~Dlkp~NILl~~---~~~-~kl~D  292 (376)
                                    .++ .++|+|+++.|||++.   ++. ..|.|
T Consensus       174 ~~~~~~l~~~~~~~~~~-~~~HgD~~~~N~l~~~~~~~~~~~~~iD  218 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTP-RLIHGDLSPDHFLTNLNSRQTPLTGIID  218 (306)
T ss_dssp             HHHHHHHHCHHHHCCCC-EEECSCCSGGGEEECTTCSSCCEEEECC
T ss_pred             HHHHHHHhCcccccCCC-eeEeCCCCcccEEEecCCCCCceEEEEe
Confidence                          122 5799999999999997   355 47889


No 266
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.09  E-value=1.1e-05  Score=76.41  Aligned_cols=78  Identities=1%  Similarity=-0.104  Sum_probs=56.0

Q ss_pred             cee-cCCCCEEEEEEEEc---C---CcEEEEEEecCCCC------HHHHHHHHHHHhcCC-C--CCceeeeeeEecC---
Q 044707          153 ALM-GECKNYVGYLGYLS---E---YHAFVLVKRFTGDS------SSILEAEKKAAWSMR-H--KNILGLLGYHQSD---  213 (376)
Q Consensus       153 ~~l-G~G~fg~Vy~~~~~---~---~~~~vavK~~~~~~------~~~~~~E~~~l~~l~-h--~nIv~l~~~~~~~---  213 (376)
                      +.| +.|..+.+|+....   +   ++..+++|......      ...+.+|+.+++.|. +  -.+.++++++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            457 88889999998764   1   14678999876533      145778888888875 2  3567788877655   


Q ss_pred             CceEEEeecCCCCCHhh
Q 044707          214 SASVLVYPHPREGTLDN  230 (376)
Q Consensus       214 ~~~~lv~e~~~~gsL~~  230 (376)
                      +..++||||++|.++.+
T Consensus       106 g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SSCEEEEECCCCBCCCB
T ss_pred             CCceEEEEecCCCChhh
Confidence            35689999999877654


No 267
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.04  E-value=3.7e-05  Score=74.08  Aligned_cols=73  Identities=11%  Similarity=-0.004  Sum_probs=48.3

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEEEecCCCC----------HHHHHHHHHHHhcCCC--CC-ceeeeeeEecCCceEE
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLVKRFTGDS----------SSILEAEKKAAWSMRH--KN-ILGLLGYHQSDSASVL  218 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~E~~~l~~l~h--~n-Iv~l~~~~~~~~~~~l  218 (376)
                      .+.||.|.++.||++....++..++||......          ...+..|.+++..+..  +. +.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            357999999999999765445789999754321          1456778888887642  33 4455544  3455689


Q ss_pred             EeecCCCC
Q 044707          219 VYPHPREG  226 (376)
Q Consensus       219 v~e~~~~g  226 (376)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764


No 268
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.85  E-value=7.3e-05  Score=69.89  Aligned_cols=75  Identities=17%  Similarity=0.031  Sum_probs=60.5

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCC---CCCceeeeeeEecCCceEEEeecCCCCCH
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMR---HKNILGLLGYHQSDSASVLVYPHPREGTL  228 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  228 (376)
                      .+.|+.|....+|+....  +..+++|+........+..|...|+.|.   ...+.++++++...+..++||||+++..+
T Consensus        41 ~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDE--VQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             EEEECCSSSSEEEEEESS--SCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             eEEeCCccceeeeEEEEC--CCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            356899999999998753  4678899887655577889999888874   35688889888888889999999998764


No 269
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.83  E-value=0.00022  Score=66.62  Aligned_cols=154  Identities=12%  Similarity=0.034  Sum_probs=84.4

Q ss_pred             ceecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCC--CCCceeeee------eEecCCceEEEeecCC
Q 044707          153 ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMR--HKNILGLLG------YHQSDSASVLVYPHPR  224 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~--h~nIv~l~~------~~~~~~~~~lv~e~~~  224 (376)
                      ..|+.|..+.||+....+  ..+++|+.... ...+..|+.++..|.  .-.+.+++.      +....+..+++|+|++
T Consensus        38 ~~l~gG~~n~~~~v~~~~--~~~vlk~~~~~-~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~  114 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDS--GAVCLKRIHRP-EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE  114 (346)
T ss_dssp             EECC----CEEEEEEETT--EEEEEEEECSC-HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred             eeccccccCcEEEEEeCC--CCEEEEecCCC-HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence            346667788999998753  35899999763 344455666665543  112333332      1234567799999999


Q ss_pred             CCCHh--------------hhcCCC-CC---C------CCCCCHHHHH-------------------------------H
Q 044707          225 EGTLD--------------NMLCPS-PH---N------ELKLKFQQKL-------------------------------K  249 (376)
Q Consensus       225 ~gsL~--------------~~l~~~-~~---~------~~~l~~~~~~-------------------------------~  249 (376)
                      |.++.              ..++.. ..   .      ...-.|...+                               .
T Consensus       115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  194 (346)
T 2q83_A          115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG  194 (346)
T ss_dssp             CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred             CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence            86542              011100 00   0      0112332211                               1


Q ss_pred             HHHHHHHHhHHhhh----------cCCCCCeeecCCCCCcEEEeCCCCeEEccCCCc---chhhhHHHHHHHHH
Q 044707          250 IAIGIAEGVRYMHQ----------ECPRGPIAHGELQLHNIFLRHDLRPMRINAITK---IRCLLFGVLLLRLF  310 (376)
Q Consensus       250 i~~~i~~gL~yLH~----------~~~~~~iiH~Dlkp~NILl~~~~~~kl~D~~~~---~Dv~S~Gvvl~ell  310 (376)
                      +...+..++.+|+.          ..+. .++|+|+++.|||++.++.+.|.|+...   .-+|=++.++..++
T Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~~~~Dla~~l~~~~  267 (346)
T 2q83_A          195 FIEDGLRIKDRLLQSTYVPWTEQLKKSP-NLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLL  267 (346)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHSC-CEECSSCSTTSEEECGGGCEEECCCTTCEECCTHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhchHHHHHHhccccC-ceecCCCCcccEEEeCCCcEEEEehhhcccCChHHHHHHHHHHHH
Confidence            11223345667763          1233 7999999999999988888999994322   23344555555554


No 270
>1d2z_A Death domain of pelle; six-helix bundle, linear array of death domains, plastic interfaces, apoptosis; HET: EPE; 2.00A {Drosophila melanogaster} SCOP: a.77.1.2 PDB: 1ik7_A 1ygo_A
Probab=97.73  E-value=4e-06  Score=65.28  Aligned_cols=41  Identities=12%  Similarity=0.117  Sum_probs=36.3

Q ss_pred             cccCCCCchhhhh-----hcCccc----cccchhhhhHHHhhh---CCCCccc
Q 044707           16 NVSLVSNDDEAMV-----HDHHLD----SYDRSEWSMIMEEMH---KPKSPKL   56 (376)
Q Consensus        16 ~~~~~s~~~~~~~-----~~~~~~----~~~~~~~~~a~~~~~---~p~~~~~   56 (376)
                      ..+|+|||++|||     +||||+    +|.++++++||++++   |++|+.+
T Consensus        55 ~~~~~SPT~~LL~~W~g~~n~TV~~L~~lL~k~~l~~a~~~L~~~Vd~~~~~~  107 (108)
T 1d2z_A           55 KQRGRSASNEFLNIWGGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSEDLHKY  107 (108)
T ss_dssp             HHTTCCHHHHHHHHHHHHHCCBHHHHHHHHHHTTCHHHHHHTGGGSCGGGGGG
T ss_pred             HhhCCChHHHHHHHhcCCCCCcHHHHHHHHHHcchHHHHHHHHHHhhHHHhhh
Confidence            3469999999998     999999    999999999999999   6777665


No 271
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.61  E-value=0.00015  Score=66.50  Aligned_cols=73  Identities=16%  Similarity=0.159  Sum_probs=52.8

Q ss_pred             CCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH---HHHHHHHHHHhcCCC---CCceeeeeeEecCCceEEEeecCC
Q 044707          151 TKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS---SILEAEKKAAWSMRH---KNILGLLGYHQSDSASVLVYPHPR  224 (376)
Q Consensus       151 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~h---~nIv~l~~~~~~~~~~~lv~e~~~  224 (376)
                      ....+|.|..+.||+.+..++ +.|.+|+......   ..|..|...|+.|.-   -.+.+++++.    ..++||||+.
T Consensus        19 ~v~~~g~G~~~~vyrv~l~DG-~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~   93 (288)
T 3f7w_A           19 AVAERGHSHRWHLYRVELADG-TPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD   93 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTS-CEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred             EEEecCCCCCeEEEEEEECCC-CEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeec
Confidence            346789999999999998765 7899998654432   567889999888742   2345555542    2378999988


Q ss_pred             CCCH
Q 044707          225 EGTL  228 (376)
Q Consensus       225 ~gsL  228 (376)
                      ++..
T Consensus        94 ~~~~   97 (288)
T 3f7w_A           94 ERPP   97 (288)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            7643


No 272
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.30  E-value=0.0014  Score=63.57  Aligned_cols=70  Identities=6%  Similarity=0.046  Sum_probs=43.6

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEEEec-------CCC-----CHHHHHHHHHHHhc-CCCCCceeeeeeEecCCceEE
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLVKRF-------TGD-----SSSILEAEKKAAWS-MRHKNILGLLGYHQSDSASVL  218 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~-------~~~-----~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~l  218 (376)
                      .+.||.|..+.||++..  ++..++||..       ...     ....++.|+..+.. .....+.+++.+.  .+..++
T Consensus        39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l  114 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI  114 (420)
T ss_dssp             EEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred             EEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence            35789999999999964  3467999932       111     11334444433321 2234566777664  566799


Q ss_pred             EeecC-CC
Q 044707          219 VYPHP-RE  225 (376)
Q Consensus       219 v~e~~-~~  225 (376)
                      ||||+ ++
T Consensus       115 v~e~l~~g  122 (420)
T 2pyw_A          115 GMRYLEPP  122 (420)
T ss_dssp             EECCCCTT
T ss_pred             EEeecCCc
Confidence            99999 76


No 273
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.02  E-value=0.0026  Score=62.00  Aligned_cols=72  Identities=18%  Similarity=0.094  Sum_probs=50.5

Q ss_pred             ceecCCCCEEEEEEEEcC-------CcEEEEEEecCCCCH-HHHHHHHHHHhcCCCCCc-eeeeeeEecCCceEEEeecC
Q 044707          153 ALMGECKNYVGYLGYLSE-------YHAFVLVKRFTGDSS-SILEAEKKAAWSMRHKNI-LGLLGYHQSDSASVLVYPHP  223 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~~~-~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~e~~  223 (376)
                      +.|+.|....+|++...+       .+..+++|+...... ..+..|..++..|...++ .++++.+.+    .+|+||+
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l  154 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI  154 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEe
Confidence            467888889999998753       136789998854222 566689998888753333 567776543    3899999


Q ss_pred             CCCCH
Q 044707          224 REGTL  228 (376)
Q Consensus       224 ~~gsL  228 (376)
                      +|.+|
T Consensus       155 ~G~~l  159 (429)
T 1nw1_A          155 PSRPL  159 (429)
T ss_dssp             CEEEC
T ss_pred             CCccc
Confidence            86444


No 274
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.99  E-value=0.0081  Score=55.51  Aligned_cols=173  Identities=10%  Similarity=0.013  Sum_probs=95.1

Q ss_pred             ccccHHHHHHHhcCCCCC-----ceecCCCCEEEEEEEEcCCcEEEEEEecCCC-CHHHHHHHHHHHhcCCCCC--ceee
Q 044707          135 LQLSWEVIMEITDKFTTK-----ALMGECKNYVGYLGYLSEYHAFVLVKRFTGD-SSSILEAEKKAAWSMRHKN--ILGL  206 (376)
Q Consensus       135 ~~~~~~~l~~~~~~f~~~-----~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~E~~~l~~l~h~n--Iv~l  206 (376)
                      ..++.+++......|...     +.|+.|....+|+....++  .+++|..... ....+..|+.++..|...+  +.++
T Consensus         5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g--~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~   82 (322)
T 2ppq_A            5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD--PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLP   82 (322)
T ss_dssp             CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC--CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc--cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence            346777887777777652     3466788899999987543  5889988763 2255667887777664212  2333


Q ss_pred             eee------EecCCceEEEeecCCCCCHhh------------------hcCCCCCCC-CCC---CHHHHHHH--------
Q 044707          207 LGY------HQSDSASVLVYPHPREGTLDN------------------MLCPSPHNE-LKL---KFQQKLKI--------  250 (376)
Q Consensus       207 ~~~------~~~~~~~~lv~e~~~~gsL~~------------------~l~~~~~~~-~~l---~~~~~~~i--------  250 (376)
                      +..      ....+..+++++|++|..+..                  ......... ...   .|.....-        
T Consensus        83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  162 (322)
T 2ppq_A           83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  162 (322)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence            321      122356789999998865321                  111100000 001   13221100        


Q ss_pred             ----HHHHHHHhHHhhhcC----CCCCeeecCCCCCcEEEeCCCCeEEccCCCc---chhhhHHHHHHHHH
Q 044707          251 ----AIGIAEGVRYMHQEC----PRGPIAHGELQLHNIFLRHDLRPMRINAITK---IRCLLFGVLLLRLF  310 (376)
Q Consensus       251 ----~~~i~~gL~yLH~~~----~~~~iiH~Dlkp~NILl~~~~~~kl~D~~~~---~Dv~S~Gvvl~ell  310 (376)
                          ...+...+.++....    +. .++|+|+.+.|||++.+..+.|.|+...   .-+|=++.++..++
T Consensus       163 ~~~l~~~l~~~~~~l~~~~~~~~~~-~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g~~~~Dla~~l~~~~  232 (322)
T 2ppq_A          163 EKGLREEIRPEIDYLAAHWPKDLPA-GVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLNAWC  232 (322)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCE-EEECSCCCGGGEEEETTEEEEECCCTTCEEEEHHHHHHHHHHHHS
T ss_pred             hhhhHHHHHHHHHHHHhhCcccCCc-ccCCCCCCccCEEEeCCceEEEecchhccCchhHHHHHHHHHHHH
Confidence                011334455555321    23 7999999999999998766679994332   22455566665543


No 275
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.94  E-value=0.0025  Score=58.70  Aligned_cols=71  Identities=11%  Similarity=-0.051  Sum_probs=44.5

Q ss_pred             CCCceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCc-eeeeeeEecCCceEEEeecC-CC
Q 044707          150 TTKALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNI-LGLLGYHQSDSASVLVYPHP-RE  225 (376)
Q Consensus       150 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~e~~-~~  225 (376)
                      ...+.|+.|....+|+.      ..+++|+......  ....+|+.+++.+...++ .++++++  .+..++++||+ ++
T Consensus        21 ~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g   92 (301)
T 3dxq_A           21 TGPLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGA   92 (301)
T ss_dssp             CSCEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTC
T ss_pred             cceeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCC
Confidence            33578999999999998      2378888765432  123567777776642222 4555543  33457899999 55


Q ss_pred             CCH
Q 044707          226 GTL  228 (376)
Q Consensus       226 gsL  228 (376)
                      .+|
T Consensus        93 ~~l   95 (301)
T 3dxq_A           93 QTM   95 (301)
T ss_dssp             EEC
T ss_pred             ccC
Confidence            444


No 276
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.77  E-value=0.0032  Score=58.69  Aligned_cols=75  Identities=5%  Similarity=-0.054  Sum_probs=38.6

Q ss_pred             eecCCCCEE-EEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCC--CCceeeeeeEecCCceEEEeecCCCCCHhh
Q 044707          154 LMGECKNYV-GYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRH--KNILGLLGYHQSDSASVLVYPHPREGTLDN  230 (376)
Q Consensus       154 ~lG~G~fg~-Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  230 (376)
                      .|+.|+... +|+....++ ..+++|.........+..|+.++..+..  -.+.+++.+....+  +++||++.+.++.+
T Consensus        25 ~l~gg~s~~~~~r~~~~~~-~~~vlk~~~~~~~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l~~  101 (333)
T 3csv_A           25 PLAGDASSRRYQRLRSPTG-AKAVLMDWSPEEGGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALFTE  101 (333)
T ss_dssp             C--------CCEEEECTTC-CEEEEEECCTTTTCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBHHH
T ss_pred             ECCCCCCCceEEEEEcCCC-CeEEEEECCCCCCccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcchHH
Confidence            465555444 667754323 5577776654321334556666666532  23556676643333  78999997766654


Q ss_pred             h
Q 044707          231 M  231 (376)
Q Consensus       231 ~  231 (376)
                      .
T Consensus       102 ~  102 (333)
T 3csv_A          102 V  102 (333)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 277
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.75  E-value=0.013  Score=54.25  Aligned_cols=92  Identities=11%  Similarity=0.093  Sum_probs=56.9

Q ss_pred             ccccHHHHHHHhcCCCC-----CceecCCCCEEEEEEEEcCCcEEEEEEecCCC--CHHHHHHHHHHHhcCCCC--Ccee
Q 044707          135 LQLSWEVIMEITDKFTT-----KALMGECKNYVGYLGYLSEYHAFVLVKRFTGD--SSSILEAEKKAAWSMRHK--NILG  205 (376)
Q Consensus       135 ~~~~~~~l~~~~~~f~~-----~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~h~--nIv~  205 (376)
                      ..++.+++......|..     ...|+ |....||+....+ ++.+++|.....  ....+..|..++..|...  .+.+
T Consensus         9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~-g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~   86 (328)
T 1zyl_A            9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDED-RRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAA   86 (328)
T ss_dssp             CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTT-CCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred             CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCC-CCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecc
Confidence            34555666555554432     23466 7788999887644 357999998743  336677788888777422  2344


Q ss_pred             eeee-----EecCCceEEEeecCCCCCH
Q 044707          206 LLGY-----HQSDSASVLVYPHPREGTL  228 (376)
Q Consensus       206 l~~~-----~~~~~~~~lv~e~~~~gsL  228 (376)
                      ++..     ....+..+++|+|++|..+
T Consensus        87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~  114 (328)
T 1zyl_A           87 PVAFNGQTLLNHQGFYFAVFPSVGGRQF  114 (328)
T ss_dssp             CCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred             eeecCCcEEEEECCEEEEEEEecCCCCC
Confidence            4443     1224556789999987543


No 278
>2a9i_A IRAK-4, interleukin-1 receptor-associated kinase-4; hexahelical bundle, transferase; 1.70A {Mus musculus} PDB: 3mop_G
Probab=96.66  E-value=0.00032  Score=55.02  Aligned_cols=37  Identities=8%  Similarity=-0.123  Sum_probs=33.4

Q ss_pred             ccccCCCCchhhhh----hcCccc----cccchhhhhHHHhhhCC
Q 044707           15 CNVSLVSNDDEAMV----HDHHLD----SYDRSEWSMIMEEMHKP   51 (376)
Q Consensus        15 ~~~~~~s~~~~~~~----~~~~~~----~~~~~~~~~a~~~~~~p   51 (376)
                      |..+|.|||++|||    +||||.    +|.++++++||+++..+
T Consensus        59 ~~~~~~SPT~~LL~~Wg~~~~TV~~Ll~lL~~~~l~~Aa~~L~~~  103 (113)
T 2a9i_A           59 LLQTGLSPTCELLFDWGTTNCTVGDLVDLLVQIELFAPATLLLPD  103 (113)
T ss_dssp             TTTTTCCHHHHHHHHHGGGTCBHHHHHHHHHHTTCHHHHHHHCGG
T ss_pred             hhccCCCHHHHHHHHHccCCCcHHHHHHHHHHcccHHHHHHhchh
Confidence            45679999999999    999999    99999999999999853


No 279
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.60  E-value=0.0051  Score=58.87  Aligned_cols=155  Identities=12%  Similarity=-0.008  Sum_probs=91.0

Q ss_pred             ceecCCCCEEEEEEEEcC-------CcEEEEEEecCCC--CHHHHHHHHHHHhcCC-CCCceeeeeeEecCCceEEEeec
Q 044707          153 ALMGECKNYVGYLGYLSE-------YHAFVLVKRFTGD--SSSILEAEKKAAWSMR-HKNILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~--~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~  222 (376)
                      +.|..|-...+|++...+       .+..+++|+....  ....+.+|..+++.|. +.-..++++++.+    .+||||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~  131 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY  131 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence            457778788899998752       2367899986432  2256678999988775 2223566776554    299999


Q ss_pred             CCCCCHhhh-----------------cCCCC-CCCCCC--CHHHHHHHHHHHHH-------------------HhHHhhh
Q 044707          223 PREGTLDNM-----------------LCPSP-HNELKL--KFQQKLKIAIGIAE-------------------GVRYMHQ  263 (376)
Q Consensus       223 ~~~gsL~~~-----------------l~~~~-~~~~~l--~~~~~~~i~~~i~~-------------------gL~yLH~  263 (376)
                      ++|.+|..-                 |+... ......  -|.++.++..++..                   .+.+|..
T Consensus       132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~  211 (379)
T 3feg_A          132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK  211 (379)
T ss_dssp             CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred             ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence            997655311                 11100 111222  24556656554422                   2333332


Q ss_pred             ----cCCCCCeeecCCCCCcEEEeCC----CCeEEccCCC---cchhhhHHHHHHHHHh
Q 044707          264 ----ECPRGPIAHGELQLHNIFLRHD----LRPMRINAIT---KIRCLLFGVLLLRLFC  311 (376)
Q Consensus       264 ----~~~~~~iiH~Dlkp~NILl~~~----~~~kl~D~~~---~~Dv~S~Gvvl~ellt  311 (376)
                          ...+..++|+|+.+.|||++.+    +.+.+.|+..   ..=.|-+|..+.+...
T Consensus       212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~~~Dla~~~~~~~~  270 (379)
T 3feg_A          212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFDIGNHFCEWVY  270 (379)
T ss_dssp             HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEHHHHHHHHHHHTTE
T ss_pred             HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCChHHHHHHHHHHHHh
Confidence                1111179999999999999876    7889999333   2335778888888774


No 280
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.27  E-value=0.0065  Score=53.23  Aligned_cols=85  Identities=9%  Similarity=0.026  Sum_probs=62.8

Q ss_pred             CCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeeecCCCCCcEEEeCCCCeEEcc-------------
Q 044707          226 GTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAHGELQLHNIFLRHDLRPMRIN-------------  292 (376)
Q Consensus       226 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D-------------  292 (376)
                      -||.++|.   ..+.++++.++|.++.|.+.+|.-+-...   .-..+=+-|..|++..+|.+.+.+             
T Consensus        33 vSL~eIL~---~~~~PlsEEqaWALc~Qc~~~L~~~~~~~---~~~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~p  106 (229)
T 2yle_A           33 LSLEEILR---LYNQPINEEQAWAVCYQCCGSLRAAARRR---QPRHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAG  106 (229)
T ss_dssp             EEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSGGGEEEETTSCEEECCC------------
T ss_pred             ccHHHHHH---HcCCCcCHHHHHHHHHHHHHHHHhhhhcc---cCCceecCCcceEEecCCceecccccccccccCCCCh
Confidence            47899996   55789999999999999999987652110   111222346889999999887665             


Q ss_pred             ------CCCcchhhhHHHHHHHHHhCC-CCC
Q 044707          293 ------AITKIRCLLFGVLLLRLFCRR-SMP  316 (376)
Q Consensus       293 ------~~~~~Dv~S~Gvvl~elltg~-P~~  316 (376)
                            .+.+.=|||+|++||..+--. |-.
T Consensus       107 e~~~~~~te~~~IysLG~tLY~ALDygL~e~  137 (229)
T 2yle_A          107 KLGYSQCMETEVIESLGIIIYKALDYGLKEN  137 (229)
T ss_dssp             CCSSSSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             hhccccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence                  157778999999999998655 543


No 281
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.23  E-value=0.025  Score=55.51  Aligned_cols=72  Identities=14%  Similarity=0.026  Sum_probs=48.0

Q ss_pred             ceecCCCCEEEEEEEEcCCcEEEEEEecCCCCH--HHHHHHHHHHhcCCCCCc-eeeeeeEecCCceEEEeecCCCCCH
Q 044707          153 ALMGECKNYVGYLGYLSEYHAFVLVKRFTGDSS--SILEAEKKAAWSMRHKNI-LGLLGYHQSDSASVLVYPHPREGTL  228 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~e~~~~gsL  228 (376)
                      +.|+.|-...+|++...+++..+++|+......  -....|..++..|...++ .++++++.+    .+||||++|.+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence            468888889999999875347788998754322  112588888888865555 467776632    359999987544


No 282
>1wh4_A IRAK4, interleukin-1 receptor-associated kinase 4; death domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.77.1.2
Probab=96.04  E-value=0.0011  Score=52.98  Aligned_cols=37  Identities=8%  Similarity=-0.155  Sum_probs=33.4

Q ss_pred             ccccCCCCchhhhh----hcCccc----cccchhhhhHHHhhhCC
Q 044707           15 CNVSLVSNDDEAMV----HDHHLD----SYDRSEWSMIMEEMHKP   51 (376)
Q Consensus        15 ~~~~~~s~~~~~~~----~~~~~~----~~~~~~~~~a~~~~~~p   51 (376)
                      |..+|.|||++||+    +||||.    +|.++++++||+++..+
T Consensus        66 ~~~~~~SPT~~LL~~Wg~~~~TV~~Ll~lL~~~~~~~Aa~~L~~~  110 (127)
T 1wh4_A           66 LLQTGKSPTCELLFDWGTTNCTVGDLVDLLVQIELFAPATLLLPD  110 (127)
T ss_dssp             HHTTTSCHHHHHHHHHHHHCCBHHHHHHHHHHTTCHHHHHHHCTT
T ss_pred             hhccCCCHHHHHHHHHhccCCcHHHHHHHHHHcccHHHHHHHHHh
Confidence            45679999999999    999998    99999999999999853


No 283
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.98  E-value=0.015  Score=55.03  Aligned_cols=72  Identities=13%  Similarity=-0.067  Sum_probs=44.0

Q ss_pred             ceecCCCCEEEEEEEEcCC--------cEEEEEEecCCCCH--HHHHHHHHHHhcCCCCC-ceeeeeeEecCCceEEEee
Q 044707          153 ALMGECKNYVGYLGYLSEY--------HAFVLVKRFTGDSS--SILEAEKKAAWSMRHKN-ILGLLGYHQSDSASVLVYP  221 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~~--------~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lv~e  221 (376)
                      ..|+.|....+|++...++        +..+++|+......  .....|..++..+...+ +.++++..  .  -++|||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e  114 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE  114 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence            4577888889999987531        25788898765332  12357888887775333 34666544  2  268999


Q ss_pred             cCCCCCH
Q 044707          222 HPREGTL  228 (376)
Q Consensus       222 ~~~~gsL  228 (376)
                      |++|.++
T Consensus       115 ~i~G~~l  121 (369)
T 3c5i_A          115 WLYGDPL  121 (369)
T ss_dssp             CCCSEEC
T ss_pred             EecCCcC
Confidence            9987543


No 284
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.34  E-value=0.11  Score=48.65  Aligned_cols=64  Identities=16%  Similarity=0.108  Sum_probs=40.4

Q ss_pred             CEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCC---CCCceeeeee------EecCCceEEEeecCCCCCH
Q 044707          160 NYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMR---HKNILGLLGY------HQSDSASVLVYPHPREGTL  228 (376)
Q Consensus       160 fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~------~~~~~~~~lv~e~~~~gsL  228 (376)
                      ...||+....+ + .+++|+......   ..|+.++..|.   -+++.+.+..      ....+..+++|+|++|..+
T Consensus        36 ~N~vy~v~~~~-g-~~vLK~~~~~~~---~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~~~  108 (339)
T 3i1a_A           36 NAFAYQADSES-K-SYFIKLKYGYHD---EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNG  108 (339)
T ss_dssp             SCEEEEEECSS-C-EEEEEEEECSSC---CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCCBT
T ss_pred             ccceEEEEeCC-C-CEEEEEecCccc---hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCCcC
Confidence            67999997653 3 789998765442   35555555542   1224444432      2335667899999998765


No 285
>1d2z_B Death domain of tube; six-helix bundle, linear array of death domains, plastic interfaces, apoptosis; HET: EPE; 2.00A {Drosophila melanogaster} SCOP: a.77.1.2
Probab=94.93  E-value=0.0073  Score=49.05  Aligned_cols=35  Identities=9%  Similarity=-0.089  Sum_probs=31.0

Q ss_pred             cccc--CCCCchhhhh---h------cCccc----cccchhhhhHHHhhh
Q 044707           15 CNVS--LVSNDDEAMV---H------DHHLD----SYDRSEWSMIMEEMH   49 (376)
Q Consensus        15 ~~~~--~~s~~~~~~~---~------~~~~~----~~~~~~~~~a~~~~~   49 (376)
                      |+++  |+|||++||.   .      ||||.    +|.++++|+||+++.
T Consensus        78 ~~r~~~~~Spt~~lLdeWGTsG~~~~rpTV~~L~~LL~kaeL~~AAd~va  127 (153)
T 1d2z_B           78 ANRLPPDQSKSQMMIDEWKTSGKLNERPTVGVLLQLLVQAELFSAADFVA  127 (153)
T ss_dssp             HHHSCTTCCHHHHHHHHHHTCSSSTTSCBHHHHHHHHHHTTCHHHHHHHH
T ss_pred             HhhccCCCCHHHHHHHHhccCCcccCCCcHHHHHHHHHHhhHHHHHHHHH
Confidence            3555  9999999998   3      99999    999999999999888


No 286
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.47  E-value=0.19  Score=48.30  Aligned_cols=155  Identities=13%  Similarity=0.041  Sum_probs=90.5

Q ss_pred             ceecCCCCEEEEEEEEcCC-------cEEEEEEecCCCCH---------------------HHHHHHHHHHhcCC-CCCc
Q 044707          153 ALMGECKNYVGYLGYLSEY-------HAFVLVKRFTGDSS---------------------SILEAEKKAAWSMR-HKNI  203 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~~-------~~~vavK~~~~~~~---------------------~~~~~E~~~l~~l~-h~nI  203 (376)
                      +.|..|--..+|++...++       ...|.+++.-....                     +....|..+++.+. +.-.
T Consensus        58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~  137 (401)
T 3f2s_A           58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG  137 (401)
T ss_dssp             EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred             EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence            3566677889999887531       25688887643211                     11224888888775 3334


Q ss_pred             eeeeeeEecCCceEEEeecCCCCCHhh--h---------------cCCCC-CCCCCCC--HHHHHHHHHHHH--------
Q 044707          204 LGLLGYHQSDSASVLVYPHPREGTLDN--M---------------LCPSP-HNELKLK--FQQKLKIAIGIA--------  255 (376)
Q Consensus       204 v~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~-~~~~~l~--~~~~~~i~~~i~--------  255 (376)
                      .++++++.++    +|+||+++-+|..  +               ++... .......  |..+.++..++.        
T Consensus       138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~  213 (401)
T 3f2s_A          138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES  213 (401)
T ss_dssp             CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred             CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence            5777776532    8999999755421  1               11100 1112222  334444443321        


Q ss_pred             --------------HHhH----HhhhcCCCCCeeecCCCCCcEEEeCC------CCeEEccCCC---cchhhhHHHHHHH
Q 044707          256 --------------EGVR----YMHQECPRGPIAHGELQLHNIFLRHD------LRPMRINAIT---KIRCLLFGVLLLR  308 (376)
Q Consensus       256 --------------~gL~----yLH~~~~~~~iiH~Dlkp~NILl~~~------~~~kl~D~~~---~~Dv~S~Gvvl~e  308 (376)
                                    .-+.    +|.....+..++|+|+.+.|||++.+      +.+.+.|+..   ..=.|-+|..+.|
T Consensus       214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~~~~~~Dla~~~~e  293 (401)
T 3f2s_A          214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCE  293 (401)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEEEEHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCcCChHHHHHHHHHH
Confidence                          1122    22222122279999999999999887      7899999433   3346888999999


Q ss_pred             HHh
Q 044707          309 LFC  311 (376)
Q Consensus       309 llt  311 (376)
                      .+.
T Consensus       294 ~~~  296 (401)
T 3f2s_A          294 WMY  296 (401)
T ss_dssp             TTE
T ss_pred             HHh
Confidence            874


No 287
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.34  E-value=0.34  Score=46.83  Aligned_cols=153  Identities=10%  Similarity=0.017  Sum_probs=91.5

Q ss_pred             ceecCCCCEEEEEEEEcCC-------cEEEEEEecCCCCH--HHHHHHHHHHhcCCCCC-ceeeeeeEecCCceEEEeec
Q 044707          153 ALMGECKNYVGYLGYLSEY-------HAFVLVKRFTGDSS--SILEAEKKAAWSMRHKN-ILGLLGYHQSDSASVLVYPH  222 (376)
Q Consensus       153 ~~lG~G~fg~Vy~~~~~~~-------~~~vavK~~~~~~~--~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lv~e~  222 (376)
                      +.|..|-...+|+......       +..+++|+......  -...+|..+++.+.-.+ ..++++.+.    -++||||
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ef  151 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEEF  151 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEEC
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEEE
Confidence            4577788889999987631       36788898754332  22357888887775223 345565432    2789999


Q ss_pred             CCCCCHhh-hcC----------------CC-------CC--CCCCCCHHHHHHHHHHH-------------------HHH
Q 044707          223 PREGTLDN-MLC----------------PS-------PH--NELKLKFQQKLKIAIGI-------------------AEG  257 (376)
Q Consensus       223 ~~~gsL~~-~l~----------------~~-------~~--~~~~l~~~~~~~i~~~i-------------------~~g  257 (376)
                      ++|.+|.. -+.                ..       ..  ...+.-|.++.++..++                   ...
T Consensus       152 I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e  231 (424)
T 3mes_A          152 IDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEE  231 (424)
T ss_dssp             CCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred             eCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHH
Confidence            99865421 010                00       00  11222355554444332                   122


Q ss_pred             hHHhhhc---------------------CCCCCeeecCCCCCcEEEeCCCCeEEccCCCc---chhhhHHHHHHHHHh
Q 044707          258 VRYMHQE---------------------CPRGPIAHGELQLHNIFLRHDLRPMRINAITK---IRCLLFGVLLLRLFC  311 (376)
Q Consensus       258 L~yLH~~---------------------~~~~~iiH~Dlkp~NILl~~~~~~kl~D~~~~---~Dv~S~Gvvl~ellt  311 (376)
                      +.+|...                     .+. .++|+|+.+.||+ +.++.+.+.|+..+   -=.|-+|..+.+...
T Consensus       232 ~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~-~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~~~~Dla~~~~~~~~  307 (424)
T 3mes_A          232 IDQLEELIMGGEKFSMERALELKLYSPAFSL-VFAHNDLQENNLL-QTQNNIRMIDYEYSAINFAGADIANYFCEYIY  307 (424)
T ss_dssp             HHHHHHHHHTSSCCCHHHHHHHHTTCGGGCE-EEECSCCCGGGEE-ECSSCEEECCCTTCEEEEHHHHHHHHHHTTTE
T ss_pred             HHHHHHHHhhhcccccccccccccccCCCCc-eEECCCCCcccee-cCCCcEEEEecccCCcCChHHHHHHHHHHHHh
Confidence            3333321                     112 6999999999999 88889999994333   235778888888773


No 288
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=92.20  E-value=0.78  Score=39.85  Aligned_cols=111  Identities=12%  Similarity=0.075  Sum_probs=78.4

Q ss_pred             HHHHHHhcCCCCCceeeeeeEecCCceEEEeecCCCC-CHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCC
Q 044707          190 AEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPREG-TLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRG  268 (376)
Q Consensus       190 ~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~  268 (376)
                      .|+.+|. ..||+++.. ..-...+...+.|+.-..+ ++.. +       ..++...+++++..|+.-..+++..    
T Consensus        35 ~el~LL~-~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-------k~~~~~eKlr~l~ni~~l~~~~~~r----  100 (215)
T 4ann_A           35 HLMYLLE-QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-------KSFTKNEKLRYLLNIKNLEEVNRTR----  100 (215)
T ss_dssp             GGGGGGG-SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-------GGSCHHHHHHHHHHGGGGGGGGGSS----
T ss_pred             HHHHHHh-ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-------HhcCHHHHHHHHHHHHHHHHHhcCc----
Confidence            3444443 358888866 4556667667767664422 3333 3       3578899999999999888777654    


Q ss_pred             CeeecCCCCCcEEEeCCCCeEEccC-----------CCcchhhhHHHHHHHHHhCC-CCC
Q 044707          269 PIAHGELQLHNIFLRHDLRPMRINA-----------ITKIRCLLFGVLLLRLFCRR-SMP  316 (376)
Q Consensus       269 ~iiH~Dlkp~NILl~~~~~~kl~D~-----------~~~~Dv~S~Gvvl~elltg~-P~~  316 (376)
                        +|--|.|+||+++.++.+++.-.           +...=.-.+=+++..+++++ .|.
T Consensus       101 --~tf~L~P~NL~f~~~~~p~i~~RGik~~l~P~~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          101 --YTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             --EECCCSGGGEEECTTSCEEESCCEETTTBSCCCCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             --eEEEEecceEEEcCCCCEEEEEccCccCCCCCCCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence              77889999999999999998872           11222346788899999998 775


No 289
>2g7r_A Mucosa-associated lymphoid tissue lymphoma transl protein 1; death domain, chromosomal translocation, hydrolase; 2.70A {Homo sapiens}
Probab=89.11  E-value=0.088  Score=40.55  Aligned_cols=46  Identities=13%  Similarity=0.034  Sum_probs=34.9

Q ss_pred             eeeeeec-------ccccccCCCCchhhhh----hcCccc----cccchhhhhHHHhhhCC
Q 044707            6 VSFRLSG-------TDCNVSLVSNDDEAMV----HDHHLD----SYDRSEWSMIMEEMHKP   51 (376)
Q Consensus         6 ~~~~~~~-------~~~~~~~~s~~~~~~~----~~~~~~----~~~~~~~~~a~~~~~~p   51 (376)
                      -.||+|.       -.=-.++.||++.||+    ++.|+.    .|..|++-.|.+.++.|
T Consensus        56 ~~fr~S~~~l~~cslkvle~~gSPSr~LL~~~~~~g~Tl~~L~~~Lq~mg~~EAi~~L~~~  116 (117)
T 2g7r_A           56 GRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLSPP  116 (117)
T ss_dssp             ----CCHHHHHHHHGGGGSTTCCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred             cccccChHHhhhhhhhhhccCCChHHHHHHHHHHcCCcHHHHHHHHHHhccHHHHHHhcCC
Confidence            4578887       2334678999999999    999988    89999999999998865


No 290
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.79  E-value=0.045  Score=53.67  Aligned_cols=57  Identities=11%  Similarity=-0.073  Sum_probs=17.0

Q ss_pred             CceecCCCCEEEEEEEEcCCcEEEEE------EecCCCCH-----HHHHHHHHHHhcCCCCCceeeeeeEe
Q 044707          152 KALMGECKNYVGYLGYLSEYHAFVLV------KRFTGDSS-----SILEAEKKAAWSMRHKNILGLLGYHQ  211 (376)
Q Consensus       152 ~~~lG~G~fg~Vy~~~~~~~~~~vav------K~~~~~~~-----~~~~~E~~~l~~l~h~nIv~l~~~~~  211 (376)
                      .+.||   ||.||+|.+.....+||+      |..+....     ..+.+|..++..++|+|+++.++|..
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            35666   999999999754467888      76654322     45778888888899999999988753


No 291
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.94  E-value=4.2  Score=35.33  Aligned_cols=126  Identities=14%  Similarity=0.061  Sum_probs=81.0

Q ss_pred             EEEEEEecCCCCHHHHHHHHHHHhcCCCCCceeeeeeEecCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHH
Q 044707          173 AFVLVKRFTGDSSSILEAEKKAAWSMRHKNILGLLGYHQSDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAI  252 (376)
Q Consensus       173 ~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~  252 (376)
                      ..+.+|+-.....+  ..|+.+|. ..||++  -...-.+.+...+.|+.-+++.=...+       ..++...+++++.
T Consensus        25 ~~~~l~ks~ik~~~--~~e~~lL~-~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~   92 (219)
T 4ano_A           25 YTVIFQRAKLKMQD--PLELEVLK-EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAI   92 (219)
T ss_dssp             EEEEEEGGGCCCCS--GGGGGGGG-GSCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHH
T ss_pred             EEEEEEHHHhccCC--HHHHHHHh-ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHH
Confidence            45556654433221  12333333 257877  333446677777777765443223333       2478899999999


Q ss_pred             HHHHHhH-HhhhcCCCCCeeecCCCCCcEEEeCCCCeEEccCCCc----------ch-hhhHHHHHHHHHhCC-CCC
Q 044707          253 GIAEGVR-YMHQECPRGPIAHGELQLHNIFLRHDLRPMRINAITK----------IR-CLLFGVLLLRLFCRR-SMP  316 (376)
Q Consensus       253 ~i~~gL~-yLH~~~~~~~iiH~Dlkp~NILl~~~~~~kl~D~~~~----------~D-v~S~Gvvl~elltg~-P~~  316 (376)
                      .|+.-.. +++..      +|--|.|+||+++.++.+++.-.+.+          .| .-.+=+++..++.++ .|.
T Consensus        93 nl~~L~~~~~~~r------~tf~l~P~NL~f~~~~~p~i~hRGi~~~lpP~e~~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A           93 HLVSKVKHHSARR------LIFIVCPENLMFNRALEPFFLHVGVKESLPPDEWDDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             HHHHHHSSCCSSS------EECCCCGGGEEECTTCCEEESCCEETTTBSSCSCCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             HHHHHHHHhhhCc------eeEEEeCceEEEeCCCcEEEEEcCCcccCCCCCCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            9888777 66654      77788999999999999999882221          22 236778888888887 663


No 292
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=62.29  E-value=0.44  Score=46.74  Aligned_cols=28  Identities=14%  Similarity=0.010  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHhcCCCCCceeeeeeEecC
Q 044707          186 SILEAEKKAAWSMRHKNILGLLGYHQSD  213 (376)
Q Consensus       186 ~~~~~E~~~l~~l~h~nIv~l~~~~~~~  213 (376)
                      ++|..|++.+.+++|+|+|+++|||...
T Consensus       324 ~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          324 ETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            6899999999999999999999998764


No 293
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=56.64  E-value=8.4  Score=36.38  Aligned_cols=43  Identities=19%  Similarity=0.149  Sum_probs=32.0

Q ss_pred             CeeecCCCCCcEEE------eCCCCeEEcc--CCCcch-hhhHHHHHHHHHh
Q 044707          269 PIAHGELQLHNIFL------RHDLRPMRIN--AITKIR-CLLFGVLLLRLFC  311 (376)
Q Consensus       269 ~iiH~Dlkp~NILl------~~~~~~kl~D--~~~~~D-v~S~Gvvl~ellt  311 (376)
                      .++|+|+.+.|||+      +++..+++.|  ++.-.| .|=+|-.+.|...
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~~fDlan~f~ew~~  296 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMY  296 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEHHHHHHHHHHHTTE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCchHhHHHHHHHHhc
Confidence            36799999999999      3456789999  333333 3667888888764


No 294
>1wmg_A Netrin receptor UNC5H2; six helix bundle, death domain, apoptosis, structural genomi NPPSFA; 2.10A {Mus musculus} SCOP: a.77.1.2
Probab=39.19  E-value=6.8  Score=29.58  Aligned_cols=33  Identities=15%  Similarity=0.145  Sum_probs=27.3

Q ss_pred             cCCCCchhhhh-------hcCccc----cccchhhhhHHHhhhC
Q 044707           18 SLVSNDDEAMV-------HDHHLD----SYDRSEWSMIMEEMHK   50 (376)
Q Consensus        18 ~~~s~~~~~~~-------~~~~~~----~~~~~~~~~a~~~~~~   50 (376)
                      +..|||+.||.       .++||.    .|.+++...|++++..
T Consensus        52 ~~~SPt~~LL~~W~~~~~~~~tv~~L~~~L~~mgR~Da~~~L~~   95 (103)
T 1wmg_A           52 TKASPTGVILDLWEARQQDDGDLNSLASALEEMGKSEMLVAMAT   95 (103)
T ss_dssp             TSSCHHHHHHHHHHHHCCSTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHhcCCCCcHHHHHHHHHHcCCHHHHHHHHc
Confidence            46899999996       348887    8889999999998874


No 295
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=29.57  E-value=1.5e+02  Score=27.24  Aligned_cols=132  Identities=17%  Similarity=0.103  Sum_probs=64.4

Q ss_pred             eecCCCCEEEEEEEEcCCcEEEEEEecCCCCHHHHHHHHHHHhcCCCCCceeeeee--------------E--------e
Q 044707          154 LMGECKNYVGYLGYLSEYHAFVLVKRFTGDSSSILEAEKKAAWSMRHKNILGLLGY--------------H--------Q  211 (376)
Q Consensus       154 ~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~--------------~--------~  211 (376)
                      .+-.|. +-||.+...  +..++||-......+-+-.++...-.+.-|+.--+.-.              -        .
T Consensus        76 ~s~~Gs-tgvff~~td--~~~~VVK~s~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~~l  152 (342)
T 1cja_A           76 RSEKGT-EGLFFVETE--SGVFIVKRSTNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVITTL  152 (342)
T ss_dssp             ECCSTT-SCEEEEEES--SCEEEEECCTTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHHHH
T ss_pred             eccCCC-CCeEEEEeC--CCEEEEeCcHHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHHHh
Confidence            344454 445555543  46799995532111445555655556666653222111              0        0


Q ss_pred             cCCceEEEeecCCCCCHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCCCeee-cCCCCCcEEEeCCCC-eE
Q 044707          212 SDSASVLVYPHPREGTLDNMLCPSPHNELKLKFQQKLKIAIGIAEGVRYMHQECPRGPIAH-GELQLHNIFLRHDLR-PM  289 (376)
Q Consensus       212 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~~iiH-~Dlkp~NILl~~~~~-~k  289 (376)
                      ..+...++|||.+|..|...-..  .....+.......  .+-+-++.++..+....+.+. .--.++|||++.++. +.
T Consensus       153 ~~~~~~l~meyv~G~~L~e~~~~--~~~~~f~~~~~k~--LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~  228 (342)
T 1cja_A          153 ANQANILLMELVRGITLNKLTTT--SAPEVLTKSTMQQ--LGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVV  228 (342)
T ss_dssp             TTCSEEEEEECCCEEESTTCCSS--SHHHHSCHHHHHH--HHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEE
T ss_pred             hcccceehhhhcCCCccccchhh--hhhhhcCHHHHHh--hchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEE
Confidence            12245699999987655443211  0001122222221  112344555555533212222 225789999987554 77


Q ss_pred             Ecc
Q 044707          290 RIN  292 (376)
Q Consensus       290 l~D  292 (376)
                      ++|
T Consensus       229 ~ID  231 (342)
T 1cja_A          229 PID  231 (342)
T ss_dssp             ECS
T ss_pred             EEc
Confidence            888


Done!