Your job contains 1 sequence.
>044708
MKFCKKYEEYMQQKQQKLPKVACKKLKKILKKCRLACQSQKDPESNSNADGVAQIKITSC
HNRCPVCDGAFFPTLVNDMSAVVRYFNKRAKKLINLHQAAGLKKYFLWIKGKMQGQGTHV
SSLIEQGKELVVYALINAIMIRKILKKYDKSPWLRELMALHINLGETNVSSSTMAAMSSE
GYRLTFNDDKLSLSCELFDSIRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVS
IVDGLKLADPREKCPLCRQASVFMLFLQIYLINGCYINSCREYWEKRLQIERVERVKQAK
EYWENQCRAFMGI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044708
(313 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024675 - symbol:NLA "nitrogen limitation adap... 497 2.0e-73 2
TAIR|locus:2064935 - symbol:AT2G38920 species:3702 "Arabi... 337 9.8e-48 2
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 113 2.5e-08 2
UNIPROTKB|Q5SPU2 - symbol:TRIM26 "Tripartite motif-contai... 113 2.1e-07 2
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 116 1.4e-06 1
UNIPROTKB|C9J060 - symbol:TRIM22 "E3 ubiquitin-protein li... 127 2.6e-06 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 112 4.0e-06 1
UNIPROTKB|C9JIU5 - symbol:TRIM22 "E3 ubiquitin-protein li... 127 4.7e-06 1
UNIPROTKB|G3N137 - symbol:G3N137 "Uncharacterized protein... 115 7.4e-06 1
UNIPROTKB|E1BM69 - symbol:LOC516599 "Uncharacterized prot... 131 9.9e-06 1
UNIPROTKB|C9JWC5 - symbol:TRIM22 "E3 ubiquitin-protein li... 127 1.1e-05 1
UNIPROTKB|A2AE51 - symbol:TRIM26 "Tripartite motif-contai... 113 1.5e-05 1
CGD|CAL0005238 - symbol:orf19.5438 species:5476 "Candida ... 105 2.3e-05 1
UNIPROTKB|G5E5Y3 - symbol:G5E5Y3 "Uncharacterized protein... 127 2.6e-05 1
UNIPROTKB|Q8IYM9 - symbol:TRIM22 "E3 ubiquitin-protein li... 127 2.8e-05 1
UNIPROTKB|F1NCS0 - symbol:F1NCS0 "Uncharacterized protein... 101 6.5e-05 1
UNIPROTKB|E7EQQ5 - symbol:TRIM5 "Tripartite motif-contain... 116 7.3e-05 1
RGD|1310896 - symbol:Trim6 "tripartite motif containing 6... 122 0.00010 1
UNIPROTKB|Q3ZEE5 - symbol:TRIM5 "Tripartite motif-contain... 122 0.00010 1
UNIPROTKB|Q3MJK3 - symbol:TRIM5 "Tripartite motif protein... 122 0.00010 1
UNIPROTKB|L7N078 - symbol:TRIM6 "Uncharacterized protein"... 122 0.00012 1
MGI|MGI:2137352 - symbol:Trim6 "tripartite motif-containi... 121 0.00013 1
UNIPROTKB|E9PC22 - symbol:BRCA1 "Breast cancer type 1 sus... 98 0.00014 1
UNIPROTKB|Q5C8U4 - symbol:TRIM5 "Tripartite motif-contain... 121 0.00014 1
UNIPROTKB|A2AE48 - symbol:TRIM26 "Tripartite motif-contai... 113 0.00016 2
UNIPROTKB|E1BSU9 - symbol:LOC416147 "Uncharacterized prot... 116 0.00017 1
UNIPROTKB|E7EN90 - symbol:BRCA1 "Breast cancer type 1 sus... 97 0.00018 1
UNIPROTKB|A6PVI4 - symbol:MID2 "Probable E3 ubiquitin-pro... 113 0.00020 1
UNIPROTKB|E2QWC2 - symbol:TRIM6 "Uncharacterized protein"... 122 0.00021 1
UNIPROTKB|I3LH17 - symbol:I3LH17 "Uncharacterized protein... 119 0.00021 1
UNIPROTKB|Q9BYJ4 - symbol:TRIM34 "Tripartite motif-contai... 119 0.00022 1
UNIPROTKB|F1RLV7 - symbol:LOC100738990 "Uncharacterized p... 119 0.00022 1
UNIPROTKB|A2AAZ4 - symbol:TRIM39 "E3 ubiquitin-protein li... 96 0.00023 1
UNIPROTKB|F8W6N8 - symbol:TRIM5 "Tripartite motif-contain... 116 0.00024 1
UNIPROTKB|Q495X7 - symbol:TRIM60 "Tripartite motif-contai... 118 0.00027 1
UNIPROTKB|Q1ACD6 - symbol:TRIM5 "Tripartite motif-contain... 118 0.00029 1
UNIPROTKB|Q1ACD7 - symbol:TRIM5 "Tripartite motif-contain... 118 0.00029 1
UNIPROTKB|Q2YEM8 - symbol:TRIM5 "Tripartite motif-contain... 118 0.00029 1
UNIPROTKB|Q5J1N8 - symbol:MID2 "Uncharacterized protein" ... 111 0.00033 1
UNIPROTKB|B2RNG4 - symbol:TRIM6-TRIM34 "TRIM6-TRIM34 read... 120 0.00035 1
UNIPROTKB|Q5BN31 - symbol:TRIM5 "Tripartite motif-contain... 117 0.00037 1
UNIPROTKB|Q5D7I0 - symbol:TRIM5 "Tripartite motif-contain... 117 0.00037 1
UNIPROTKB|Q5D7I2 - symbol:TRIM5 "Tripartite motif-contain... 117 0.00037 1
UNIPROTKB|Q5D7I5 - symbol:TRIM5 "Tripartite motif-contain... 117 0.00037 1
TAIR|locus:2086666 - symbol:AT3G27330 species:3702 "Arabi... 120 0.00039 1
UNIPROTKB|Q587N7 - symbol:TRIM5 "Tripartite motif-contain... 117 0.00040 1
UNIPROTKB|Q5C8U3 - symbol:TRIM5 "Tripartite motif-contain... 117 0.00040 1
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 103 0.00043 1
UNIPROTKB|G3X823 - symbol:TRIM26 "Uncharacterized protein... 117 0.00043 1
MGI|MGI:98178 - symbol:Trim30a "tripartite motif-containi... 105 0.00047 2
UNIPROTKB|A6NLP3 - symbol:TRIM5 "Tripartite motif-contain... 116 0.00048 1
UNIPROTKB|Q9C035 - symbol:TRIM5 "Tripartite motif-contain... 116 0.00048 1
UNIPROTKB|Q1ACD8 - symbol:TRIM5 "Tripartite motif-contain... 116 0.00048 1
UNIPROTKB|Q5C8T6 - symbol:TRIM5 "Tripartite motif-contain... 116 0.00048 1
UNIPROTKB|Q5D7J1 - symbol:TRIM5 "Tripartite motif-contain... 116 0.00048 1
UNIPROTKB|Q5D7H8 - symbol:TRIM5 "Tripartite motif-contain... 116 0.00048 1
UNIPROTKB|Q5D7I3 - symbol:TRIM5 "Tripartite motif-contain... 116 0.00048 1
UNIPROTKB|G3MWZ9 - symbol:TRIM34 "Uncharacterized protein... 116 0.00054 3
UNIPROTKB|F1N541 - symbol:TRIM34 "Uncharacterized protein... 115 0.00061 1
UNIPROTKB|Q5D7I9 - symbol:TRIM5 "Tripartite motif-contain... 115 0.00063 1
UNIPROTKB|Q5D7J0 - symbol:TRIM5 "Tripartite motif-contain... 115 0.00063 1
UNIPROTKB|A2AAZ3 - symbol:TRIM39 "E3 ubiquitin-protein li... 92 0.00063 1
UNIPROTKB|E5RI62 - symbol:TRIM17 "E3 ubiquitin-protein li... 92 0.00063 1
UNIPROTKB|Q5D7I1 - symbol:TRIM5 "Tripartite motif-contain... 115 0.00073 1
UNIPROTKB|Q2YEM9 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00081 1
UNIPROTKB|Q5C8T8 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00081 1
UNIPROTKB|Q2YEN0 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00081 1
UNIPROTKB|Q587N6 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00081 1
UNIPROTKB|Q0PF16 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00082 1
UNIPROTKB|Q2YEN2 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00082 1
UNIPROTKB|Q5D7J2 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00082 1
UNIPROTKB|E9PFM0 - symbol:TRIM6 "Tripartite motif-contain... 113 0.00095 1
>TAIR|locus:2024675 [details] [associations]
symbol:NLA "nitrogen limitation adaptation" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010167 "response
to nitrate" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=TAS] [GO:0009626 "plant-type hypersensitive
response" evidence=IMP] [GO:0009627 "systemic acquired resistance"
evidence=IMP] [GO:0009697 "salicylic acid biosynthetic process"
evidence=IMP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0010337 "regulation of salicylic acid metabolic
process" evidence=IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0080021 "response to benzoic acid stimulus"
evidence=IEP;IMP] [GO:0006817 "phosphate ion transport"
evidence=RCA] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0016607
GO:GO:0042742 GO:GO:0008270 GO:GO:0009627 GO:GO:0009751
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009626 GO:GO:0004842
InterPro:IPR017907 HOGENOM:HOG000240281 KO:K16275
ProtClustDB:CLSN2687631 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 EMBL:DQ059096 EMBL:AC009525 EMBL:AK229396
EMBL:AY088823 EMBL:BT044616 IPI:IPI00533758 IPI:IPI00891550
PIR:H86158 RefSeq:NP_001117218.1 RefSeq:NP_563667.1
UniGene:At.22880 UniGene:At.46895 ProteinModelPortal:Q9SRX9
SMR:Q9SRX9 STRING:Q9SRX9 EnsemblPlants:AT1G02860.1 GeneID:839559
KEGG:ath:AT1G02860 TAIR:At1g02860 eggNOG:NOG291077
InParanoid:Q9SRX9 OMA:CYMCACS PhylomeDB:Q9SRX9
Genevestigator:Q9SRX9 GO:GO:0010337 GO:GO:0080021 GO:GO:0010167
GO:GO:0009697 Uniprot:Q9SRX9
Length = 335
Score = 497 (180.0 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 96/180 (53%), Positives = 129/180 (71%)
Query: 141 IRKILKKYDKSPWLRELMALHINLGETNVSS-STMAAMSS------EGYRLTFNDDKLSL 193
++K+ + +SPWL ELMA HINL E+ S +T+ + +G LTF+D K L
Sbjct: 156 VQKMRIEILQSPWLCELMAFHINLKESKKESGATITSPPPPVHALFDGCALTFDDGKPLL 215
Query: 194 SCELFDSIRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREK 253
SCEL DS+++DI+LTC +CL+TVFDP+SLTCGHI C MCACSAASV++VDGLK A+ EK
Sbjct: 216 SCELSDSVKVDIDLTCSICLDTVFDPISLTCGHIYCYMCACSAASVNVVDGLKTAEATEK 275
Query: 254 CPLCRQASVFMLFLQIYLINGCYINSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI 313
CPLCR+ V+ + + +N SCR+YWE+R + ER ER++QAKEYW+ QCR+F GI
Sbjct: 276 CPLCREDGVYKGAVHLDELNILLKRSCRDYWEERRKTERAERLQQAKEYWDYQCRSFTGI 335
Score = 263 (97.6 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 53/114 (46%), Positives = 71/114 (62%)
Query: 37 CQSQKDPESNSNADGVAQIKITSCHNRCPVCDGAFFPTLVNDMSAVVRYFNKRAKKLINL 96
C+ P S D + +C CPVCDG FFP L+ +M VV +FN+ A+KL+ L
Sbjct: 35 CRRNHVPSRISFTDAINH----NCSRECPVCDGTFFPELLKEMEDVVGWFNEHAQKLLEL 90
Query: 97 HQAAGLKKYFLWIKGKMQGQGTHVSSLIEQGKELVVYALINAIMIRKILKKYDK 150
H A+G K W++G + + H LI++GK+LV YALINA+ IRKILKKYDK
Sbjct: 91 HLASGFTKCLTWLRGNSRKKDHH--GLIQEGKDLVNYALINAVAIRKILKKYDK 142
>TAIR|locus:2064935 [details] [associations]
symbol:AT2G38920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006817 "phosphate ion transport" evidence=RCA]
[GO:0009062 "fatty acid catabolic process" evidence=RCA]
[GO:0016036 "cellular response to phosphate starvation"
evidence=RCA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005770
InterPro:IPR017907 EMBL:AK119158 EMBL:BT006237 IPI:IPI00526484
PIR:A84811 RefSeq:NP_181426.2 UniGene:At.37231
ProteinModelPortal:Q8GW10 SMR:Q8GW10 PaxDb:Q8GW10
EnsemblPlants:AT2G38920.1 GeneID:818477 KEGG:ath:AT2G38920
TAIR:At2g38920 eggNOG:NOG314482 HOGENOM:HOG000240281
InParanoid:Q8GW10 KO:K16275 OMA:MNAIAIR PhylomeDB:Q8GW10
ProtClustDB:CLSN2687631 Genevestigator:Q8GW10 InterPro:IPR004331
Pfam:PF03105 PROSITE:PS51382 Uniprot:Q8GW10
Length = 335
Score = 337 (123.7 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 68/164 (41%), Positives = 99/164 (60%)
Query: 151 SPWLRELMALHINLGETNVSS--STMAAMSSEGYRLTFNDDKLSLSCELFDSIRLDIELT 208
SPWL EL A ++N G NV + ++ ++ E N+D+ L L +SI L+ +LT
Sbjct: 175 SPWLIELGAFYLNSGLDNVGNFKNSFGRVACEN----LNEDQPVLKLMLPNSIELEYDLT 230
Query: 209 CPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQASVFMLFLQ 268
C +CLETVF+P +L CGHI C CACSAASV I G+K A KCP+CR+A V+ +
Sbjct: 231 CAICLETVFNPYALKCGHIFCNSCACSAASVLIFQGIKAAPRHSKCPICREAGVYAEAVH 290
Query: 269 IYLINGCYINSCREYWEKRLQIERVERVKQAKEYWENQCRAFMG 312
+ ++ +EYW++R+ ER E VKQ+K +W Q + +G
Sbjct: 291 MIELHLLLKTRSKEYWKERMMNERSEMVKQSKMFWNEQTKHMIG 334
Score = 179 (68.1 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 33 CRLACQSQKDPESNSNADGVAQIKITSCHNR-CPVCDGAFFPTLVNDMSAVVRYFNKRAK 91
C+ C S K + + SC + CP CD FF L+ + + + +F R +
Sbjct: 37 CK-TCNSTKSDDGQIIPSATSSSLSDSCECKACPWCDQMFFEELMKEATDIAGFFRSRVR 95
Query: 92 KLINLHQAAGLKKYFLWIKGKMQGQGTHVSSLIEQGKELVVYALINAIMIRKILKKYDK 150
L++LH A G+++Y + ++ + +L+++G+ L+ Y +NAI IRKILKKYDK
Sbjct: 96 HLLHLHVATGMQRYMIRLRRCFTDEK---QALVQEGQILIQYITMNAIAIRKILKKYDK 151
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 113 (44.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQ 259
L+ E+TC +CL+ + DPV++ CGH+ C+ C +S R CPLC++
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPIS--------GSRPVCPLCKK 58
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 281 REYWEKRLQIERVERVKQAK 300
R W+ +E +ER+K K
Sbjct: 66 RPVWQLASLVENIERLKVDK 85
>UNIPROTKB|Q5SPU2 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00647769
SMR:Q5SPU2 Ensembl:ENST00000415789 Ensembl:ENST00000418026
Ensembl:ENST00000419171 Ensembl:ENST00000419401
Ensembl:ENST00000422881 Ensembl:ENST00000433361
Ensembl:ENST00000433836 Ensembl:ENST00000453442 UCSC:uc003npu.1
HOGENOM:HOG000120116 Uniprot:Q5SPU2
Length = 157
Score = 113 (44.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQ 259
L+ E+TC +CL+ + DPV++ CGH+ C+ C +S R CPLC++
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPIS--------GSRPVCPLCKK 58
Score = 37 (18.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 281 REYWEKRLQIERVERVKQAK 300
R W+ +E +ER+K K
Sbjct: 66 RPVWQLASLVENIERLKVDK 85
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 116 (45.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S++D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-----KGESSCPVCR 59
>UNIPROTKB|C9J060 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00239700 ProteinModelPortal:C9J060 SMR:C9J060 STRING:C9J060
PRIDE:C9J060 Ensembl:ENST00000425490 ArrayExpress:C9J060
Bgee:C9J060 Uniprot:C9J060
Length = 203
Score = 127 (49.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 200 SIRLDIE--LTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
S+++DIE +TCP+CLE + +P+SL CGH C+ C + S++ ++ CP+C
Sbjct: 4 SVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVI----ISRGESSCPVC 59
Query: 258 R 258
+
Sbjct: 60 Q 60
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 112 (44.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 201 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
+ L E +CP+CLE + DPV++ CGH C+ C SVS D D CP+CR
Sbjct: 8 VNLQEESSCPICLEYLKDPVTINCGHNFCRSCL----SVSWKD----LDDTFPCPVCR 57
>UNIPROTKB|C9JIU5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00884241 ProteinModelPortal:C9JIU5 SMR:C9JIU5 STRING:C9JIU5
Ensembl:ENST00000414641 ArrayExpress:C9JIU5 Bgee:C9JIU5
Uniprot:C9JIU5
Length = 227
Score = 127 (49.8 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 200 SIRLDIE--LTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
S+++DIE +TCP+CLE + +P+SL CGH C+ C + S++ ++ CP+C
Sbjct: 4 SVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVI----ISRGESSCPVC 59
Query: 258 R 258
+
Sbjct: 60 Q 60
>UNIPROTKB|G3N137 [details] [associations]
symbol:G3N137 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101726 EMBL:DAAA02071445
Ensembl:ENSBTAT00000063393 OMA:PAFQCPT Uniprot:G3N137
Length = 160
Score = 115 (45.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 30/73 (41%), Positives = 39/73 (53%)
Query: 191 LSLSCELFDSIR---LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKL 247
L+ S LF S++ L+ ELTCP+CLE DP+ L C H LC CA S G +
Sbjct: 1 LNASAGLF-SLKMETLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESI 59
Query: 248 ADPRE--KCPLCR 258
+P +CP CR
Sbjct: 60 -EPITAFQCPTCR 71
>UNIPROTKB|E1BM69 [details] [associations]
symbol:LOC516599 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:DAAA02040907 IPI:IPI00838178
Ensembl:ENSBTAT00000006913 OMA:MANSENE Uniprot:E1BM69
Length = 497
Score = 131 (51.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 201 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
+ L E+TCP+CLE + +P+SL CGH C++C + ++ S+ G + A KCP+CR
Sbjct: 7 VSLQDEVTCPICLELLTEPLSLDCGHSFCQICITANSNESLT-GQERA---RKCPVCR 60
>UNIPROTKB|C9JWC5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00657693 ProteinModelPortal:C9JWC5 SMR:C9JWC5 STRING:C9JWC5
Ensembl:ENST00000454828 UCSC:uc009yet.2 ArrayExpress:C9JWC5
Bgee:C9JWC5 Uniprot:C9JWC5
Length = 305
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 200 SIRLDIE--LTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
S+++DIE +TCP+CLE + +P+SL CGH C+ C + S++ ++ CP+C
Sbjct: 4 SVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVI----ISRGESSCPVC 59
Query: 258 R 258
+
Sbjct: 60 Q 60
>UNIPROTKB|A2AE51 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:BX927221 EMBL:CR759838
EMBL:CR788282 EMBL:BX248419 EMBL:CR388382 EMBL:BX927189
HGNC:HGNC:12962 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00790584 SMR:A2AE51 Ensembl:ENST00000415966
Ensembl:ENST00000420345 Ensembl:ENST00000424124
Ensembl:ENST00000438064 Ensembl:ENST00000444979
Ensembl:ENST00000450103 Ensembl:ENST00000451189 Uniprot:A2AE51
Length = 159
Score = 113 (44.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQ 259
L+ E+TC +CL+ + DPV++ CGH+ C+ C +S R CPLC++
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPIS--------GSRPVCPLCKK 58
>CGD|CAL0005238 [details] [associations]
symbol:orf19.5438 species:5476 "Candida albicans" [GO:0016925
"protein sumoylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 CGD:CAL0005238 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717716.1 RefSeq:XP_717810.1 ProteinModelPortal:Q5A7M8
GeneID:3640523 GeneID:3640681 KEGG:cal:CaO19.12893
KEGG:cal:CaO19.5438 eggNOG:NOG131815 Uniprot:Q5A7M8
Length = 129
Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 204 DIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREK--CPLCRQAS 261
D+E CP+C + V ++ +CGH+ C C + S S G + R + CPLCR+
Sbjct: 48 DVE--CPICFDEVRRAITTSCGHVFCLECIERSISSSHARGQVRSSQRGRGLCPLCRKQV 105
Query: 262 VF 263
VF
Sbjct: 106 VF 107
>UNIPROTKB|G5E5Y3 [details] [associations]
symbol:G5E5Y3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
GeneTree:ENSGT00690000101646 EMBL:DAAA02040903
Ensembl:ENSBTAT00000040169 Uniprot:G5E5Y3
Length = 470
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 201 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
+ L E+TCP+CL+ + +P+SL CGH C+ C + VS+ D D +CP+CR
Sbjct: 7 VNLQGEVTCPICLQLLTEPLSLDCGHSFCQACITANNLVSMND----QDEDRRCPVCR 60
>UNIPROTKB|Q8IYM9 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0009615 "response to virus"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0003714 GO:GO:0019048
GO:GO:0006955 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0016567
GO:GO:0051607 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0015030 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 EMBL:X82200
EMBL:BC022281 EMBL:BC035582 IPI:IPI00477398 IPI:IPI00477812
PIR:A57041 RefSeq:NP_001186502.1 RefSeq:NP_006065.2
UniGene:Hs.501778 UniGene:Hs.684559 UniGene:Hs.733231
ProteinModelPortal:Q8IYM9 SMR:Q8IYM9 IntAct:Q8IYM9
MINT:MINT-2868217 STRING:Q8IYM9 PhosphoSite:Q8IYM9 DMDM:47606181
PaxDb:Q8IYM9 PRIDE:Q8IYM9 DNASU:10346 Ensembl:ENST00000379965
GeneID:10346 KEGG:hsa:10346 UCSC:uc001mbr.3 UCSC:uc009yes.3
CTD:10346 GeneCards:GC11P005667 HGNC:HGNC:16379 HPA:HPA003307
HPA:HPA003575 MIM:606559 neXtProt:NX_Q8IYM9 PharmGKB:PA38129
eggNOG:NOG258942 InParanoid:Q8IYM9 OMA:HQTFRIN ChiTaRS:TRIM22
GenomeRNAi:10346 NextBio:39235 ArrayExpress:Q8IYM9 Bgee:Q8IYM9
CleanEx:HS_TRIM22 Genevestigator:Q8IYM9 GermOnline:ENSG00000132274
Uniprot:Q8IYM9
Length = 498
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 200 SIRLDIE--LTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
S+++DIE +TCP+CLE + +P+SL CGH C+ C + S++ ++ CP+C
Sbjct: 4 SVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVI----ISRGESSCPVC 59
Query: 258 R 258
+
Sbjct: 60 Q 60
>UNIPROTKB|F1NCS0 [details] [associations]
symbol:F1NCS0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000017123 EMBL:AADN02012507
EMBL:AADN02012506 IPI:IPI00822105 Ensembl:ENSGALT00000038028
OMA:GEMALRS Uniprot:F1NCS0
Length = 138
Score = 101 (40.6 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQASVFM 264
+ +CP+CL+TV PV CGH+ C C + S G + CPLCRQ V +
Sbjct: 16 DFSCPICLQTVTLPVETNCGHLFCGSCLITYWKHSPWLGAII------CPLCRQKVVVL 68
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 116 (45.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S++D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-----KGESSCPVCR 59
>RGD|1310896 [details] [associations]
symbol:Trim6 "tripartite motif containing 6" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0070206 "protein trimerization" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1310896 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
OrthoDB:EOG4229JJ KO:K11999 CTD:117854 EMBL:AC113720
IPI:IPI00394064 RefSeq:NP_001163932.1 UniGene:Rn.80076
ProteinModelPortal:D4A3L4 Ensembl:ENSRNOT00000023043 GeneID:293294
KEGG:rno:293294 UCSC:RGD:1310896 NextBio:635769 Uniprot:D4A3L4
Length = 488
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 200 SIRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
++ +DI E+TCP+CLE + +P+S+ CGH C+ C + S+++ + + CP+C
Sbjct: 4 AVLVDIRDEVTCPICLELLTEPLSIDCGHSFCQACIIGNSDNSVLN----PEGKSSCPVC 59
Query: 258 R 258
R
Sbjct: 60 R 60
>UNIPROTKB|Q3ZEE5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9580 "Hylobates lar" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY923180 ProteinModelPortal:Q3ZEE5
SMR:Q3ZEE5 Uniprot:Q3ZEE5
Length = 493
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S+ DG CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDG------ERSCPVCR 58
>UNIPROTKB|Q3MJK3 [details] [associations]
symbol:TRIM5 "Tripartite motif protein TRIM5" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ eggNOG:NOG253216 KO:K10648
IPI:IPI00838178 EMBL:DAAA02040905 EMBL:AY970972 EMBL:DQ381151
RefSeq:NP_001029970.1 UniGene:Bt.107577 SMR:Q3MJK3
Ensembl:ENSBTAT00000005971 GeneID:616948 KEGG:bta:616948
InParanoid:Q3MJK3 OMA:KEERTSW NextBio:20900407 Uniprot:Q3MJK3
Length = 498
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + SI+ + + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANNKESIIG----QEGKRSCPVCR 60
>UNIPROTKB|L7N078 [details] [associations]
symbol:TRIM6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA]
GeneTree:ENSGT00690000101646 EMBL:AAEX03012850
Ensembl:ENSCAFT00000010104 Uniprot:L7N078
Length = 562
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 200 SIRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
++ +DI E+TCP+CLE + +PVS+ CGH C+ C S +V G D CP+C
Sbjct: 79 AVLVDIRDEVTCPICLELLTEPVSIDCGHSFCQACIMGN-STELVMG---QDGESSCPVC 134
Query: 258 R 258
+
Sbjct: 135 Q 135
>MGI|MGI:2137352 [details] [associations]
symbol:Trim6 "tripartite motif-containing 6" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070206 "protein
trimerization" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2137352
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 CTD:117854
EMBL:AK033396 EMBL:AK049238 EMBL:BC138965 EMBL:AF220031
IPI:IPI00407811 RefSeq:NP_001013637.1 UniGene:Mm.274843
ProteinModelPortal:Q8BGE7 SMR:Q8BGE7 PhosphoSite:Q8BGE7
PRIDE:Q8BGE7 Ensembl:ENSMUST00000098180 GeneID:94088 KEGG:mmu:94088
UCSC:uc009ivq.1 eggNOG:NOG238217 InParanoid:B2RSQ8 OMA:KSQMEPE
NextBio:352065 Bgee:Q8BGE7 CleanEx:MM_TRIM6 Genevestigator:Q8BGE7
Uniprot:Q8BGE7
Length = 488
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 200 SIRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
++ +DI E+TCP+CLE + +P+S+ CGH C++C ++ S+ R CP+C
Sbjct: 4 TVLVDIRDEVTCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFG----QGGRSSCPVC 59
Query: 258 R 258
R
Sbjct: 60 R 60
>UNIPROTKB|E9PC22 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018957 InterPro:IPR011364 Pfam:PF00097 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00946923
ProteinModelPortal:E9PC22 SMR:E9PC22 Ensembl:ENST00000492859
ArrayExpress:E9PC22 Bgee:E9PC22 Uniprot:E9PC22
Length = 59
Score = 98 (39.6 bits), Expect = 0.00014, P = 0.00014
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 207 LTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIV 242
L CP+CLE + +PVS C HI CK+ C + ++V
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKVLLCCPSWSTVV 57
>UNIPROTKB|Q5C8U4 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:60710 "Chlorocebus pygerythrus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY740612 ProteinModelPortal:Q5C8U4
SMR:Q5C8U4 Uniprot:Q5C8U4
Length = 515
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH LC+ AC A+ + + + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSLCQ--ACITANHK--ESMLYKEEERSCPVCR 60
>UNIPROTKB|A2AE48 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
eggNOG:NOG291505 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00798036 SMR:A2AE48 Ensembl:ENST00000412755
Ensembl:ENST00000416596 Ensembl:ENST00000422802
Ensembl:ENST00000423901 Ensembl:ENST00000438785
Ensembl:ENST00000446196 Ensembl:ENST00000446540
Ensembl:ENST00000449136 HOGENOM:HOG000088612 Uniprot:A2AE48
Length = 248
Score = 113 (44.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQ 259
L+ E+TC +CL+ + DPV++ CGH+ C+ C +S R CPLC++
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPIS--------GSRPVCPLCKK 58
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 281 REYWEKRLQIERVERVKQAK 300
R W+ +E +ER+K K
Sbjct: 66 RPVWQLASLVENIERLKVDK 85
>UNIPROTKB|E1BSU9 [details] [associations]
symbol:LOC416147 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00590049 Ensembl:ENSGALT00000001837 OMA:PIEERRC
Uniprot:E1BSU9
Length = 274
Score = 116 (45.9 bits), Expect = 0.00017, P = 0.00017
Identities = 25/63 (39%), Positives = 32/63 (50%)
Query: 196 ELFDSIRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCP 255
E+ S L+ ELTC +CL +PVSL CGH CK C ++ + A CP
Sbjct: 7 EVRASSSLEDELTCSICLSLYKNPVSLCCGHSFCKQCV-----QKVLSNQQQAKASYSCP 61
Query: 256 LCR 258
LCR
Sbjct: 62 LCR 64
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 97 (39.2 bits), Expect = 0.00018, P = 0.00018
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 207 LTCPVCLETVFDPVSLTCGHILCKMC 232
L CP+CLE + +PVS C HI CK C
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKFC 47
>UNIPROTKB|A6PVI4 [details] [associations]
symbol:MID2 "Probable E3 ubiquitin-protein ligase MID2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL109946
HOVERGEN:HBG056432 EMBL:AL034399 UniGene:Hs.12256 HGNC:HGNC:7096
IPI:IPI00956726 SMR:A6PVI4 STRING:A6PVI4 Ensembl:ENST00000451923
HOGENOM:HOG000170021 Uniprot:A6PVI4
Length = 219
Score = 113 (44.8 bits), Expect = 0.00020, P = 0.00020
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPRE--KCPLCR 258
L+ ELTCP+CLE DP+ L C H LC CA S G + +P +CP CR
Sbjct: 4 LESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESI-EPITAFQCPTCR 60
>UNIPROTKB|E2QWC2 [details] [associations]
symbol:TRIM6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
EMBL:AAEX03012850 Ensembl:ENSCAFT00000010112 Uniprot:E2QWC2
Length = 839
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 200 SIRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
++ +DI E+TCP+CLE + +PVS+ CGH C+ C S +V G D CP+C
Sbjct: 32 AVLVDIRDEVTCPICLELLTEPVSIDCGHSFCQACIMGN-STELVMG---QDGESSCPVC 87
Query: 258 R 258
+
Sbjct: 88 Q 88
>UNIPROTKB|I3LH17 [details] [associations]
symbol:I3LH17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
OMA:WILGVCA Ensembl:ENSSSCT00000029217 Uniprot:I3LH17
Length = 483
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S++ GL + + CP+CR
Sbjct: 12 EVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMM-GL---EGKSNCPVCR 60
>UNIPROTKB|Q9BYJ4 [details] [associations]
symbol:TRIM34 "Tripartite motif-containing protein 34"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005737 EMBL:CH471064 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ eggNOG:NOG259921 KO:K11999
EMBL:AB039902 EMBL:AB039903 EMBL:AB039904 EMBL:AF220143
EMBL:AF220144 EMBL:AK027876 EMBL:AL583914 IPI:IPI00107816
IPI:IPI00719282 RefSeq:NP_001003827.1 RefSeq:NP_067629.2
RefSeq:NP_569074.2 UniGene:Hs.729048 PDB:2EGP PDBsum:2EGP
ProteinModelPortal:Q9BYJ4 SMR:Q9BYJ4 IntAct:Q9BYJ4
PhosphoSite:Q9BYJ4 DMDM:55976584 PaxDb:Q9BYJ4 PRIDE:Q9BYJ4
DNASU:53840 Ensembl:ENST00000429814 Ensembl:ENST00000457787
Ensembl:ENST00000514226 GeneID:53840 KEGG:hsa:53840 UCSC:uc001mbh.3
CTD:53840 GeneCards:GC11P005618 GeneCards:GC11P005619
HGNC:HGNC:10063 MIM:605684 neXtProt:NX_Q9BYJ4 PharmGKB:PA35533
InParanoid:Q9BYJ4 EvolutionaryTrace:Q9BYJ4 GenomeRNAi:53840
NextBio:56186 ArrayExpress:Q9BYJ4 Bgee:Q9BYJ4 CleanEx:HS_TRIM34
Genevestigator:Q9BYJ4 GermOnline:ENSG00000121236 Uniprot:Q9BYJ4
Length = 488
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
E+TCP+CLE + +P+SL CGH LC+ C +VS + + + CP+C
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSLCRACI----TVSNKEAVTSMGGKSSCPVC 59
>UNIPROTKB|F1RLV7 [details] [associations]
symbol:LOC100738990 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000016021 OMA:HGEGGIS Uniprot:F1RLV7
Length = 492
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S++ GL + + CP+CR
Sbjct: 12 EVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMM-GL---EGKSNCPVCR 60
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 96 (38.9 bits), Expect = 0.00023, P = 0.00023
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQAS 261
L +E +C VCLE + +PV + CGH CK C + L+ P CP+CR+ S
Sbjct: 23 LQVEASCSVCLEYLKEPVIIECGHNFCKACI-----TRWWEDLERDFP---CPVCRKTS 73
>UNIPROTKB|F8W6N8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI01012489 ProteinModelPortal:F8W6N8 SMR:F8W6N8
Ensembl:ENST00000396853 ArrayExpress:F8W6N8 Bgee:F8W6N8
Uniprot:F8W6N8
Length = 327
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S++D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-----KGESSCPVCR 59
>UNIPROTKB|Q495X7 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HSSP:Q9CQJ4 HOGENOM:HOG000234133
HOVERGEN:HBG001357 EMBL:AK093201 EMBL:BC100983 EMBL:BC100984
EMBL:BC100985 EMBL:BC100986 IPI:IPI00167899 RefSeq:NP_001244954.1
RefSeq:NP_689833.1 UniGene:Hs.368004 ProteinModelPortal:Q495X7
SMR:Q495X7 STRING:Q495X7 PhosphoSite:Q495X7 DMDM:114154820
PaxDb:Q495X7 PRIDE:Q495X7 Ensembl:ENST00000341062
Ensembl:ENST00000508504 Ensembl:ENST00000512596 GeneID:166655
KEGG:hsa:166655 UCSC:uc003iqy.1 CTD:166655 GeneCards:GC04P165953
HGNC:HGNC:21162 HPA:HPA035810 neXtProt:NX_Q495X7
PharmGKB:PA134909634 eggNOG:NOG253525 InParanoid:Q495X7 KO:K12029
OMA:VSWKDLD OrthoDB:EOG4NP73C PhylomeDB:Q495X7 GenomeRNAi:166655
NextBio:88609 ArrayExpress:Q495X7 Bgee:Q495X7 CleanEx:HS_TRIM60
Genevestigator:Q495X7 Uniprot:Q495X7
Length = 471
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 35/101 (34%), Positives = 50/101 (49%)
Query: 201 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQA 260
+ L E +CP+CLE + DPV++ CGH C+ C SVS D D CP+CR
Sbjct: 8 VNLQEESSCPICLEYLKDPVTINCGHNFCRSCL----SVSWKD----LDDTFPCPVCRFC 59
Query: 261 SVFMLFLQIYLINGCYINSCREYWEKRLQIERVERVKQAKE 301
+ F + + + E K+LQI R +R +Q KE
Sbjct: 60 FPYKSFRR-----NPQLRNLTEI-AKQLQIRRSKRKRQ-KE 93
>UNIPROTKB|Q1ACD6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9590 "Symphalangus syndactylus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY843509 EMBL:DQ229284 ProteinModelPortal:Q1ACD6
SMR:Q1ACD6 Uniprot:Q1ACD6
Length = 494
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S+ D + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPD-----EGERSCPVCR 59
>UNIPROTKB|Q1ACD7 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:61853 "Nomascus leucogenys" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899858 EMBL:AY899852 EMBL:AY899853
EMBL:AY899854 EMBL:AY899855 EMBL:AY899856 EMBL:AY899857
EMBL:DQ229283 ProteinModelPortal:Q1ACD7 SMR:Q1ACD7 Uniprot:Q1ACD7
Length = 494
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S+ D + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPD-----EGERSCPVCR 59
>UNIPROTKB|Q2YEM8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:61851 "Hoolock hoolock" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899907 EMBL:AY899901 EMBL:AY899902
EMBL:AY899903 EMBL:AY899904 EMBL:AY899905 EMBL:AY899906
ProteinModelPortal:Q2YEM8 SMR:Q2YEM8 Uniprot:Q2YEM8
Length = 494
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S+ D + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPD-----EGERSCPVCR 59
>UNIPROTKB|Q5J1N8 [details] [associations]
symbol:MID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005737
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005874 InterPro:IPR017907
GeneTree:ENSGT00690000101726 eggNOG:NOG253961 HOGENOM:HOG000049193
HOVERGEN:HBG056432 OrthoDB:EOG44J2HG EMBL:AADN02013172
EMBL:AADN02013173 EMBL:AADN02013174 EMBL:AADN02013175 EMBL:AY546077
IPI:IPI00590334 UniGene:Gga.22963 Ensembl:ENSGALT00000006134
InParanoid:Q5J1N8 Uniprot:Q5J1N8
Length = 215
Score = 111 (44.1 bits), Expect = 0.00033, P = 0.00033
Identities = 24/58 (41%), Positives = 30/58 (51%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPRE--KCPLCR 258
L+ ELTCP+CLE DP+ L C H LC CA G + +P +CP CR
Sbjct: 4 LESELTCPICLELFEDPLLLPCAHSLCFSCAHRILLSGCSSGESI-EPLSAFQCPTCR 60
>UNIPROTKB|B2RNG4 [details] [associations]
symbol:TRIM6-TRIM34 "TRIM6-TRIM34 readthrough transcript"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691 KO:K11999
UniGene:Hs.729048 HGNC:HGNC:10063 EMBL:BC136871 EMBL:BC140722
IPI:IPI00854740 RefSeq:NP_001003819.1 ProteinModelPortal:B2RNG4
SMR:B2RNG4 PRIDE:B2RNG4 Ensembl:ENST00000337072
Ensembl:ENST00000354852 GeneID:445372 KEGG:hsa:445372
UCSC:uc001mbf.3 CTD:445372 HGNC:HGNC:33440 OMA:ACITQNS
GenomeRNAi:445372 NextBio:111386 ArrayExpress:B2RNG4 Bgee:B2RNG4
Uniprot:B2RNG4
Length = 842
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 194 SCELFDSIRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPR 251
S + I L++ E+TCP+CLE + +P+SL CGH LC+ C +VS + + +
Sbjct: 352 SSAMASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACI----TVSNKEAVTSMGGK 407
Query: 252 EKCPLC 257
CP+C
Sbjct: 408 SSCPVC 413
>UNIPROTKB|Q5BN31 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:39432 "Saimiri boliviensis boliviensis" [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0002218
"activation of innate immune response" evidence=ISS] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0008329 "pattern recognition receptor activity" evidence=ISS]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740614 EMBL:AY928202
ProteinModelPortal:Q5BN31 SMR:Q5BN31 PRIDE:Q5BN31 Uniprot:Q5BN31
Length = 494
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S+ L CPLCR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESM-----LHQGERSCPLCR 59
>UNIPROTKB|Q5D7I0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9521 "Saimiri sciureus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843517
ProteinModelPortal:Q5D7I0 SMR:Q5D7I0 Uniprot:Q5D7I0
Length = 494
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S+ L CPLCR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESM-----LHQGERSCPLCR 59
>UNIPROTKB|Q5D7I2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:43777 "Pithecia pithecia" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843515
ProteinModelPortal:Q5D7I2 SMR:Q5D7I2 Uniprot:Q5D7I2
Length = 494
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S+ L CPLCR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKKSM-----LHQGERSCPLCR 59
>UNIPROTKB|Q5D7I5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9493 "Callithrix pygmaea" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843512
ProteinModelPortal:Q5D7I5 SMR:Q5D7I5 Uniprot:Q5D7I5
Length = 494
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 201 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQA 260
+ + E+TCP+CLE + +P+SL CGH C+ C + S L CPLCR +
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKEST-----LHQGERSCPLCRMS 61
>TAIR|locus:2086666 [details] [associations]
symbol:AT3G27330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008166 Pfam:PF01697 IPI:IPI00542360 RefSeq:NP_189369.1
UniGene:At.5839 ProteinModelPortal:F4IWG7 SMR:F4IWG7 PRIDE:F4IWG7
EnsemblPlants:AT3G27330.1 GeneID:822354 KEGG:ath:AT3G27330
OMA:CRQLIGN ArrayExpress:F4IWG7 Uniprot:F4IWG7
Length = 913
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 31/71 (43%), Positives = 37/71 (52%)
Query: 189 DKLSLSCELFDSIRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLA 248
D + L C D +R D EL+C +CLE F+P + TCGH CK C SAA K
Sbjct: 708 DHVVLPC--IDKLR-D-ELSCAICLEICFEPSTTTCGHSFCKKCLRSAAD-------KCG 756
Query: 249 DPREKCPLCRQ 259
KCP CRQ
Sbjct: 757 ---RKCPKCRQ 764
>UNIPROTKB|Q587N7 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9534 "Chlorocebus aethiops" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY669399 EMBL:AY625002 EMBL:AY625003
EMBL:AB210050 EMBL:AB210051 EMBL:AY843504 ProteinModelPortal:Q587N7
SMR:Q587N7 PRIDE:Q587N7 Uniprot:Q587N7
Length = 515
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ AC A+ + + + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQ--ACITANHK--ESMLYKEEERSCPVCR 60
>UNIPROTKB|Q5C8U3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:60712 "Chlorocebus tantalus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY593973 EMBL:AY740613 EMBL:DQ437606
ProteinModelPortal:Q5C8U3 SMR:Q5C8U3 Uniprot:Q5C8U3
Length = 515
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ AC A+ + + + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQ--ACITANHK--ESMLYKEEERSCPVCR 60
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 103 (41.3 bits), Expect = 0.00043, P = 0.00043
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQASVF 263
E+TCP+CLE + +PVS C H C+ C +++ + + + CP+CR +F
Sbjct: 12 EVTCPICLELLKEPVSTDCNHSFCRACI----TINY-ESNRNTEGEGSCPVCRVCYLF 64
>UNIPROTKB|G3X823 [details] [associations]
symbol:TRIM26 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 OMA:YEDWETD EMBL:DAAA02055411
Ensembl:ENSBTAT00000050226 Uniprot:G3X823
Length = 546
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQ 259
L+ E+TC +CL+ + DPV++ CGH+ C+ C S+S G R CPLC++
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIRSIS--GG------RPVCPLCKK 58
>MGI|MGI:98178 [details] [associations]
symbol:Trim30a "tripartite motif-containing 30A" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IMP] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IMP]
[GO:0034122 "negative regulation of toll-like receptor signaling
pathway" evidence=IMP] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IMP] [GO:1900226 "negative regulation of NLRP3
inflammasome complex assembly" evidence=IMP] [GO:2000378 "negative
regulation of reactive oxygen species metabolic process"
evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
MGI:MGI:98178 Pfam:PF00097 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0032720 GO:GO:0032715 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:CH466531 GO:GO:0045732 GO:GO:2000378 InterPro:IPR017907
GO:GO:0034122 GO:GO:0051865 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 eggNOG:NOG310455
EMBL:J03776 EMBL:AF220014 EMBL:AF220015 EMBL:AF220016 EMBL:AK134144
EMBL:AK137506 EMBL:AC122400 EMBL:AC142110 EMBL:BC005447
IPI:IPI00466858 IPI:IPI00875139 PIR:A30891 RefSeq:NP_033125.2
UniGene:Mm.295578 PDB:2ECW PDBsum:2ECW ProteinModelPortal:P15533
SMR:P15533 STRING:P15533 PRIDE:P15533 Ensembl:ENSMUST00000076922
GeneID:20128 KEGG:mmu:20128 CTD:20128 InParanoid:P15533 OMA:AICLLCE
OrthoDB:EOG4229JJ EvolutionaryTrace:P15533 NextBio:297627
Bgee:P15533 CleanEx:MM_TRIM30 Genevestigator:P15533
GermOnline:ENSMUSG00000030921 GO:GO:1900226 Uniprot:P15533
Length = 496
Score = 105 (42.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +PVS C H C+ AC + + + D + CP+CR
Sbjct: 12 EVTCPICLELLKEPVSADCNHSFCR--ACITLNY---ESNRNTDGKGNCPVCR 59
Score = 52 (23.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 280 CREYWEKRLQIERVERVKQAKEYWENQCRAFMGI 313
C E W+ LQ++RV+ Q + EN R F G+
Sbjct: 157 CDE-WQDDLQLQRVDWENQIQINVENVQRQFKGL 189
>UNIPROTKB|A6NLP3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005794 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691
EMBL:AC025016 EMBL:AC131574 HOVERGEN:HBG001357 HOGENOM:HOG000234134
HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341 IPI:IPI00394971
ProteinModelPortal:A6NLP3 SMR:A6NLP3 IntAct:A6NLP3 STRING:A6NLP3
PRIDE:A6NLP3 Ensembl:ENST00000305836 ArrayExpress:A6NLP3
Bgee:A6NLP3 Uniprot:A6NLP3
Length = 493
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S++D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-----KGESSCPVCR 59
>UNIPROTKB|Q9C035 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0008329
"pattern recognition receptor activity" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IMP]
[GO:0002218 "activation of innate immune response" evidence=IDA]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0019048 EMBL:CH471064
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
GO:GO:0070206 InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
EMBL:AC015691 HOVERGEN:HBG001357 OrthoDB:EOG4229JJ GO:GO:0031664
EMBL:AF220025 EMBL:AF220026 EMBL:AF220027 EMBL:AF220028
EMBL:AF220029 EMBL:AY625000 EMBL:DQ301444 EMBL:DQ301445
EMBL:DQ301446 EMBL:DQ301447 EMBL:DQ301448 EMBL:DQ301449
EMBL:DQ301450 EMBL:DQ301451 EMBL:DQ301452 EMBL:DQ301453
EMBL:DQ301454 EMBL:DQ301455 EMBL:DQ301456 EMBL:DQ301457
EMBL:DQ301458 EMBL:DQ301459 EMBL:DQ301460 EMBL:DQ301461
EMBL:DQ301462 EMBL:DQ301463 EMBL:DQ301464 EMBL:DQ301465
EMBL:DQ301466 EMBL:DQ301467 EMBL:DQ301468 EMBL:DQ301469
EMBL:DQ301470 EMBL:DQ301471 EMBL:DQ301472 EMBL:DQ301473
EMBL:DQ301474 EMBL:DQ301475 EMBL:DQ301476 EMBL:DQ301477
EMBL:DQ301478 EMBL:DQ301479 EMBL:DQ301480 EMBL:DQ288685
EMBL:JF928461 EMBL:JF928462 EMBL:AK027593 EMBL:EU260465
EMBL:BC021258 IPI:IPI00394972 IPI:IPI00394973 IPI:IPI00394974
IPI:IPI00394975 IPI:IPI00873422 RefSeq:NP_149023.2
RefSeq:NP_149083.2 RefSeq:NP_149084.2 UniGene:Hs.125300 PDB:2ECV
PDB:2YRG PDBsum:2ECV PDBsum:2YRG ProteinModelPortal:Q9C035
SMR:Q9C035 IntAct:Q9C035 STRING:Q9C035 PhosphoSite:Q9C035
DMDM:38605459 PaxDb:Q9C035 PRIDE:Q9C035 DNASU:85363
Ensembl:ENST00000380027 Ensembl:ENST00000380034
Ensembl:ENST00000396847 Ensembl:ENST00000396855
Ensembl:ENST00000433961 GeneID:85363 KEGG:hsa:85363 UCSC:uc001mbm.2
UCSC:uc001mbn.3 UCSC:uc001mbp.3 CTD:85363 GeneCards:GC11M005641
H-InvDB:HIX0009393 HGNC:HGNC:16276 HPA:CAB013497 HPA:HPA023420
HPA:HPA023422 MIM:608487 neXtProt:NX_Q9C035 PharmGKB:PA38109
eggNOG:NOG253216 KO:K10648 OMA:WILGVCA ChiTaRS:TRIM5
EvolutionaryTrace:Q9C035 GenomeRNAi:85363 NextBio:75883
ArrayExpress:Q9C035 Bgee:Q9C035 Genevestigator:Q9C035
GermOnline:ENSG00000132256 Uniprot:Q9C035
Length = 493
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S++D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-----KGESSCPVCR 59
>UNIPROTKB|Q1ACD8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9597 "Pan paniscus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:DQ229282 ProteinModelPortal:Q1ACD8 SMR:Q1ACD8
Uniprot:Q1ACD8
Length = 493
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S++D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-----KGESSCPVCR 59
>UNIPROTKB|Q5C8T6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9595 "Gorilla gorilla gorilla" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY899872 EMBL:AY899866 EMBL:AY899867
EMBL:AY899868 EMBL:AY899869 EMBL:AY899870 EMBL:AY899871
EMBL:AY710300 EMBL:AY740620 EMBL:DQ298178 EMBL:AY843510
EMBL:AY923178 EMBL:DQ437600 ProteinModelPortal:Q5C8T6 SMR:Q5C8T6
Uniprot:Q5C8T6
Length = 493
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S++D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHEKSMLD-----KGESSCPVCR 59
>UNIPROTKB|Q5D7J1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9598 "Pan troglodytes" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 HSSP:Q14134 GO:GO:0031664 CTD:85363
eggNOG:NOG253216 KO:K10648 EMBL:AH014830 EMBL:AY740617
EMBL:AY843506 EMBL:DQ298177 EMBL:AY923177 EMBL:DQ437595
RefSeq:NP_001012668.1 UniGene:Ptr.6259 ProteinModelPortal:Q5D7J1
SMR:Q5D7J1 STRING:Q5D7J1 GeneID:503563 KEGG:ptr:503563
NextBio:20866205 Uniprot:Q5D7J1
Length = 493
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S++D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-----KGESSCPVCR 59
>UNIPROTKB|Q5D7H8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:230833 "Callicebus donacophilus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843519
ProteinModelPortal:Q5D7H8 SMR:Q5D7H8 Uniprot:Q5D7H8
Length = 494
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 201 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
+ + E+TCP+CLE + +P+SL CGH C+ C + S L CPLCR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKEST-----LHQGERSCPLCR 59
>UNIPROTKB|Q5D7I3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9538 "Erythrocebus patas" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY740619 EMBL:AY843514
ProteinModelPortal:Q5D7I3 SMR:Q5D7I3 Uniprot:Q5D7I3
Length = 495
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHKKSML----YKEEERSCPVCR 60
>UNIPROTKB|G3MWZ9 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 Ensembl:ENSBTAT00000063426
Uniprot:G3MWZ9
Length = 844
Score = 116 (45.9 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 40/185 (21%), Positives = 82/185 (44%)
Query: 96 LHQAAGLKKYFLWIKGKMQGQGTHV-SSLIEQGKELVVYALINAIMIRKILKKYDKSPWL 154
+ Q+ L++ ++ + QG T + + + K + L + LK ++P L
Sbjct: 252 VQQSQSLRELISDLEHRCQGSATELLQDVSDVAKRSEFWTLKKPEALPTKLKSMFRAPDL 311
Query: 155 RELMALHINLGETN-----VSSSTMAAMSSEGYRLTFNDDKLSLSCELFDSIRLDIELTC 209
++++ + L + +SS + S + + + + L + L E++C
Sbjct: 312 KKMLRVFRELTDVQSYWGLISSGEVRRSSRRAPEVWTGGSQGAAAMALNTVMNLQEEVSC 371
Query: 210 PVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC-RQASVFMLFLQ 268
P+C E + +P+SL CGH C+ C + + + G D CP+C Q S+ L+
Sbjct: 372 PICRELLTEPLSLGCGHSFCQTCITNKETDISLGG----D--SSCPVCGTQYSLGNLWPN 425
Query: 269 IYLIN 273
++L N
Sbjct: 426 LHLAN 430
Score = 115 (45.5 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 200 SIRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
++ +DI E+TCP+CLE + +P+S+ CGH C+ C +A + + G + + +CP+C
Sbjct: 32 AVLVDIQDEVTCPICLELLTEPLSIDCGHSFCQACI-TADNKESMPG---QEGQSRCPVC 87
Query: 258 RQASVFM 264
Q S ++
Sbjct: 88 -QTSYWL 93
Score = 44 (20.5 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 270 YLINGC-YINSCREYWE 285
Y I GC Y +S + YWE
Sbjct: 690 YGILGCQYFSSGKHYWE 706
Score = 38 (18.4 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 62 NRCPVCDGAFF 72
+RCPVC +++
Sbjct: 82 SRCPVCQTSYW 92
>UNIPROTKB|F1N541 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 KO:K11999
CTD:117854 EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00883463
RefSeq:NP_001192118.1 UniGene:Bt.111657 Ensembl:ENSBTAT00000015712
GeneID:514492 KEGG:bta:514492 OMA:HHKHEYR NextBio:20871361
ArrayExpress:F1N541 Uniprot:F1N541
Length = 487
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00061
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 200 SIRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLC 257
++ +DI E+TCP+CLE + +P+S+ CGH C+ C +A + + G + + +CP+C
Sbjct: 4 AVLVDIQDEVTCPICLELLTEPLSIDCGHSFCQACI-TADNKESMPG---QEGQSRCPVC 59
Query: 258 RQASVFM 264
Q S ++
Sbjct: 60 -QTSYWL 65
>UNIPROTKB|Q5D7I9 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:54133 "Pygathrix nemaeus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY843508 ProteinModelPortal:Q5D7I9
SMR:Q5D7I9 Uniprot:Q5D7I9
Length = 495
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 201 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
+ + E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>UNIPROTKB|Q5D7J0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:33548 "Colobus guereza" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY843507 EMBL:AY710298
ProteinModelPortal:Q5D7J0 SMR:Q5D7J0 Uniprot:Q5D7J0
Length = 495
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 201 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
+ + E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>UNIPROTKB|A2AAZ3 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 eggNOG:NOG238084 IPI:IPI00790532
SMR:A2AAZ3 Ensembl:ENST00000424074 Ensembl:ENST00000424180
Ensembl:ENST00000428404 Ensembl:ENST00000429069
Ensembl:ENST00000434118 Ensembl:ENST00000434862
Ensembl:ENST00000441470 Uniprot:A2AAZ3
Length = 59
Score = 92 (37.4 bits), Expect = 0.00063, P = 0.00063
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 203 LDIELTCPVCLETVFDPVSLTCGHILCKMC 232
L +E +C VCLE + +PV + CGH CK C
Sbjct: 23 LQVEASCSVCLEYLKEPVIIECGHNFCKAC 52
>UNIPROTKB|E5RI62 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL139288 EMBL:AL670729 HGNC:HGNC:13430
IPI:IPI00975887 ProteinModelPortal:E5RI62 SMR:E5RI62
Ensembl:ENST00000520264 ArrayExpress:E5RI62 Bgee:E5RI62
Uniprot:E5RI62
Length = 50
Score = 92 (37.4 bits), Expect = 0.00063, P = 0.00063
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 202 RLDIELTCPVCLETVFDPVSLTCGHILCKMC 232
+L E TC +CL+ DPV TCGH C+ C
Sbjct: 9 KLQEEATCSICLDYFTDPVMTTCGHNFCRAC 39
>UNIPROTKB|Q5D7I1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9509 "Ateles geoffroyi" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740616 EMBL:AY843516
ProteinModelPortal:Q5D7I1 SMR:Q5D7I1 Uniprot:Q5D7I1
Length = 547
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S L CPLCR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKEST-----LHQGERSCPLCR 59
>UNIPROTKB|Q2YEM9 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9600 "Pongo pygmaeus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HSSP:Q9CQJ4
HOVERGEN:HBG001357 HOGENOM:HOG000234134 GO:GO:0031664
eggNOG:NOG253216 UniGene:Pab.19510 EMBL:AY899900 EMBL:AY899894
EMBL:AY899895 EMBL:AY899896 EMBL:AY899897 EMBL:AY899898
EMBL:AY899899 EMBL:AY843513 EMBL:AY923179 EMBL:CR857231
EMBL:AY710302 EMBL:DQ437601 ProteinModelPortal:Q2YEM9 SMR:Q2YEM9
STRING:Q2YEM9 Uniprot:Q2YEM9
Length = 493
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S +D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSTLD-----KGERSCPVCR 59
>UNIPROTKB|Q5C8T8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9601 "Pongo abelii" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HSSP:Q13049
HOVERGEN:HBG001357 GO:GO:0031664 CTD:85363 KO:K10648 EMBL:AY740618
RefSeq:NP_001124542.1 UniGene:Pab.19510 ProteinModelPortal:Q5C8T8
SMR:Q5C8T8 GeneID:100137088 KEGG:pon:100137088 Uniprot:Q5C8T8
Length = 493
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + P+SL CGH C+ C + S +D CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSTLD-----KGERSCPVCR 59
>UNIPROTKB|Q2YEN0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9545 "Macaca nemestrina" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899893 EMBL:AY899887 EMBL:AY899888
EMBL:AY899889 EMBL:AY899890 EMBL:AY899891 EMBL:AY899892
EMBL:DQ437602 ProteinModelPortal:Q2YEN0 SMR:Q2YEN0 Uniprot:Q2YEN0
Length = 495
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>UNIPROTKB|Q587N6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9541 "Macaca fascicularis" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AB210052 ProteinModelPortal:Q587N6
SMR:Q587N6 Uniprot:Q587N6
Length = 495
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>UNIPROTKB|Q0PF16 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9544 "Macaca mulatta" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0008329 "pattern recognition
receptor activity" evidence=ISS] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=ISS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISS] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISS] [GO:0051607 "defense
response to virus" evidence=TAS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0051607 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932
GO:GO:0004842 GO:GO:0070206 InterPro:IPR017907 GO:GO:0070534
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0008329 InterPro:IPR003879
PRINTS:PR01407 PDB:4B3N PDBsum:4B3N GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 OrthoDB:EOG4229JJ
GO:GO:0031664 CTD:85363 eggNOG:NOG253216 KO:K10648 OMA:WILGVCA
EMBL:AY625001 EMBL:AY899886 EMBL:AY899880 EMBL:AY899881
EMBL:AY899882 EMBL:AY899883 EMBL:AY899884 EMBL:AY899885
EMBL:EF113914 EMBL:AY523632 EMBL:AY523633 EMBL:DQ842020
EMBL:DQ842021 RefSeq:NP_001028082.1 UniGene:Mmu.3751 PDB:2LM3
PDB:3UV9 PDBsum:2LM3 PDBsum:3UV9 ProteinModelPortal:Q0PF16
SMR:Q0PF16 IntAct:Q0PF16 STRING:Q0PF16 Ensembl:ENSMMUT00000000490
GeneID:574288 KEGG:mcc:574288 InParanoid:Q6QWE9 NextBio:19977526
Uniprot:Q0PF16
Length = 497
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>UNIPROTKB|Q2YEN2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9551 "Macaca assamensis" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899879 EMBL:AY899873 EMBL:AY899874
EMBL:AY899875 EMBL:AY899876 EMBL:AY899877 EMBL:AY899878
ProteinModelPortal:Q2YEN2 SMR:Q2YEN2 Uniprot:Q2YEN2
Length = 497
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>UNIPROTKB|Q5D7J2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9555 "Papio anubis" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 CTD:85363 EMBL:AY843505
RefSeq:NP_001106102.1 UniGene:Pan.11156 ProteinModelPortal:Q5D7J2
SMR:Q5D7J2 GeneID:100126714 Uniprot:Q5D7J2
Length = 497
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 206 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHRKSML----YKEGERSCPVCR 60
>UNIPROTKB|E9PFM0 [details] [associations]
symbol:TRIM6 "Tripartite motif-containing protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC015691
HGNC:HGNC:16277 ChiTaRS:TRIM6 IPI:IPI00470944
ProteinModelPortal:E9PFM0 SMR:E9PFM0 Ensembl:ENST00000380107
UCSC:uc009yeo.2 ArrayExpress:E9PFM0 Bgee:E9PFM0 Uniprot:E9PFM0
Length = 462
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 201 IRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCR 258
+ +DI E+TCP+CLE + +P+S+ CGH C+ C S++ + CP+C+
Sbjct: 5 VLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIG----QEGERSCPVCQ 60
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.136 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 313 285 0.00085 115 3 11 22 0.43 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 72
No. of states in DFA: 614 (65 KB)
Total size of DFA: 224 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.90u 0.11s 24.01t Elapsed: 00:00:02
Total cpu time: 23.90u 0.11s 24.01t Elapsed: 00:00:02
Start: Fri May 10 06:46:57 2013 End: Fri May 10 06:46:59 2013