BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044715
MKVKALVAVKTKLFRPCKKLNQIFKFKLRKSFFIRSLRSRSFPTTKRSKPQKSPSRTRIS
ALLPSFRPPKQWKKMEKLAEEHRSVSENPECDQALFSSPITPVLFPSPITPDYVKACRLS
KRDEVEDVEDACRSFENYLVEMVVEEGKVGDLTDVEELLYCWKNLKCPVFIDLVCRFYGE
LCKDLFFPEDDEDHANLQTQPK

High Scoring Gene Products

Symbol, full name Information P value
OFP17
AT2G30395 		protein from Arabidopsis thaliana 1.3e-29
AT1G06923 protein from Arabidopsis thaliana 1.3e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044715
        (202 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955904 - symbol:OFP17 "AT2G30395" species:3...   328  1.3e-29   1
TAIR|locus:1009023088 - symbol:AT1G06923 species:3702 "Ar...   262  1.3e-22   1


>TAIR|locus:504955904 [details] [associations]
            symbol:OFP17 "AT2G30395" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IDA]
            GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AY247804
            EMBL:AY649280 IPI:IPI00526979 RefSeq:NP_850144.2 UniGene:At.45712
            EnsemblPlants:AT2G30395.1 GeneID:817590 KEGG:ath:AT2G30395
            TAIR:At2g30395 eggNOG:NOG285946 HOGENOM:HOG000005724
            InParanoid:Q84RF2 OMA:WKNLKSP PhylomeDB:Q84RF2
            ProtClustDB:CLSN2681245 Genevestigator:Q84RF2 Uniprot:Q84RF2
        Length = 195

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 78/183 (42%), Positives = 97/183 (53%)

Query:    15 RPCKKLNQIFKFKLXXXXXXXXXXXXXXPTTKRSKPQKSPSRTRISALLPSFRPPKQWKK 74
             + C +   +F+F++                  R   Q   S+  I + L      K   K
Sbjct:    16 KSCNRFVSLFRFRVKRPVFIRPLRARHGNVKPRH--QHHHSKKPICSCLCFLNSSKN-HK 72

Query:    75 MEKLAEEHRSVSENPECDQALFSSPITPV----LFPSPITPDYVKACR--LSKRDEVED- 127
             M        S S N +       SP+TP     LF SPIT  Y    R  L+ RD  ED 
Sbjct:    73 MSNAKHRSSSFSVNDDDYSKFMQSPLTPATAKKLFTSPITTPYSSRTRKSLNARDTFEDN 132

Query:   128 -VEDACRSFENYLVEMVVEEGKVGDLTDVEELLYCWKNLKCPVFIDLVCRFYGELCKDLF 186
              VEDACRSFENYL+ ++VEEGK+ DL D+EELL+CWKNLK PVFI+LV RFYGELC+DLF
Sbjct:   133 AVEDACRSFENYLIHLIVEEGKIDDLMDIEELLFCWKNLKSPVFIELVSRFYGELCRDLF 192

Query:   187 FPE 189
               E
Sbjct:   193 SGE 195


>TAIR|locus:1009023088 [details] [associations]
            symbol:AT1G06923 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002684
            GenomeReviews:CT485782_GR UniGene:At.51508 UniGene:At.63161
            EMBL:DQ487467 IPI:IPI00656864 RefSeq:NP_001030983.1
            UniGene:At.73223 PRIDE:Q1G3W7 EnsemblPlants:AT1G06923.1
            GeneID:3766672 KEGG:ath:AT1G06923 TAIR:At1g06923 OMA:MEELLYY
            PhylomeDB:Q1G3W7 Genevestigator:Q2V4Q5 Uniprot:Q1G3W7
        Length = 170

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 54/92 (58%), Positives = 67/92 (72%)

Query:   104 LFPSPITPDYVKACRLSKRDEV-ED-VEDACRSFENYLVEMVVEEGKVGDLTDVEELLYC 161
             +FP  +T    KA R S+R  + ED V++ACR FENY++ M VE+GK+ DL D+EELLY 
Sbjct:    81 MFPLAMTQRNKKA-RTSQRHMLKEDGVKEACRRFENYMIHMFVEDGKIDDLMDMEELLYY 139

Query:   162 WKNLKCPVFIDLVCRFYGELCKDLFFPEDDED 193
             WKNL  P+FIDLV RFYGELC DLF P D +D
Sbjct:   140 WKNLNSPIFIDLVTRFYGELCTDLF-PSDHDD 170


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      202       176   0.00081  109 3  11 22  0.42    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  173 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.42u 0.10s 20.52t   Elapsed:  00:00:02
  Total cpu time:  20.42u 0.10s 20.52t   Elapsed:  00:00:02
  Start:  Fri May 10 07:01:38 2013   End:  Fri May 10 07:01:40 2013

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