BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044715
         (202 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P62288|ASPM_FELCA Abnormal spindle-like microcephaly-associated protein homolog
           (Fragment) OS=Felis catus GN=ASPM PE=2 SV=1
          Length = 3461

 Score = 32.7 bits (73), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 30/61 (49%)

Query: 44  TTKRSKPQKSPSRTRISALLPSFRPPKQWKKMEKLAEEHRSVSENPECDQALFSSPITPV 103
           + K S+  +SP   R + +LP FR  +  +  E + EE R++    +C     + P  PV
Sbjct: 417 SNKNSQVSQSPQDQRTNGVLPCFRECQGSQSPEAIFEESRTLEMKSDCYSFTKNQPKFPV 476

Query: 104 L 104
           +
Sbjct: 477 I 477


>sp|Q196Y6|VF268_IIV3 Uncharacterized protein 074L OS=Invertebrate iridescent virus 3
           GN=IIV3-074L PE=3 SV=1
          Length = 834

 Score = 31.2 bits (69), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 12/72 (16%)

Query: 69  PKQWKK--MEKLAEEHRSVS----ENPECDQALFSSPITPVLFPSPIT----PDYVKACR 118
           P+  KK  +EKL EE  S +    +N   D +L   P  P+L+  P T    PD    C+
Sbjct: 578 PENTKKFVVEKLEEERTSFTRQFYDNLRIDSSLIRKPTKPILWNKPTTQVELPDIKTVCK 637

Query: 119 LSKRDEVEDVED 130
              R++V+D +D
Sbjct: 638 --NRNDVQDEQD 647


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.136    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,417,331
Number of Sequences: 539616
Number of extensions: 3103662
Number of successful extensions: 8397
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 8392
Number of HSP's gapped (non-prelim): 24
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)