Query 044725
Match_columns 121
No_of_seqs 124 out of 1139
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 06:09:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044725.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044725hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.3E-30 2.7E-35 213.2 10.6 107 12-120 313-439 (451)
2 PLN02207 UDP-glycosyltransfera 100.0 3.8E-30 8.2E-35 211.3 9.6 106 12-120 321-454 (468)
3 PLN02555 limonoid glucosyltran 100.0 5.7E-30 1.2E-34 210.8 9.4 108 11-120 325-458 (480)
4 PLN03015 UDP-glucosyl transfer 100.0 1.3E-29 2.8E-34 208.2 9.9 107 12-120 323-457 (470)
5 PLN03004 UDP-glycosyltransfera 100.0 4.7E-29 1E-33 204.1 10.8 104 12-120 322-450 (451)
6 PLN02173 UDP-glucosyl transfer 100.0 4.7E-29 1E-33 204.0 9.5 108 11-120 304-437 (449)
7 PLN02554 UDP-glycosyltransfera 100.0 1.4E-28 2.9E-33 202.4 8.4 105 12-120 331-467 (481)
8 PLN02992 coniferyl-alcohol glu 100.0 3.1E-28 6.8E-33 200.5 10.2 107 12-120 326-458 (481)
9 PLN02534 UDP-glycosyltransfera 100.0 2.8E-28 6.1E-33 201.2 9.3 107 12-120 332-475 (491)
10 PLN00164 glucosyltransferase; 99.9 5.4E-28 1.2E-32 199.0 10.1 107 12-120 327-462 (480)
11 PLN02152 indole-3-acetate beta 99.9 4.9E-28 1.1E-32 198.3 9.2 106 12-120 316-445 (455)
12 PLN02210 UDP-glucosyl transfer 99.9 7.4E-28 1.6E-32 197.1 9.8 106 13-120 313-444 (456)
13 PLN02167 UDP-glycosyltransfera 99.9 6.5E-28 1.4E-32 198.1 9.5 105 12-120 329-461 (475)
14 PLN03007 UDP-glucosyltransfera 99.9 7.7E-28 1.7E-32 197.9 9.8 107 12-120 333-469 (482)
15 PLN02208 glycosyltransferase f 99.9 3.4E-27 7.4E-32 192.7 9.1 103 11-119 298-427 (442)
16 PLN00414 glycosyltransferase f 99.9 1.8E-26 4E-31 188.6 10.4 103 11-118 299-428 (446)
17 PLN02863 UDP-glucoronosyl/UDP- 99.9 2E-26 4.4E-31 189.6 9.9 106 11-120 330-460 (477)
18 PLN02764 glycosyltransferase f 99.9 1.8E-26 3.9E-31 189.0 9.0 104 11-120 304-434 (453)
19 PLN02670 transferase, transfer 99.9 3.2E-26 6.9E-31 188.3 9.6 97 12-110 327-448 (472)
20 PLN02562 UDP-glycosyltransfera 99.9 3.1E-26 6.6E-31 187.2 9.0 102 12-120 317-438 (448)
21 PLN02448 UDP-glycosyltransfera 99.9 7.7E-26 1.7E-30 185.1 9.2 104 15-120 315-446 (459)
22 PF00201 UDPGT: UDP-glucoronos 99.8 8.1E-22 1.8E-26 160.9 5.4 86 21-111 321-426 (500)
23 PHA03392 egt ecdysteroid UDP-g 99.8 1.8E-18 4E-23 143.4 8.6 85 21-110 344-448 (507)
24 KOG1192 UDP-glucuronosyl and U 99.7 1.1E-17 2.3E-22 136.2 7.4 92 13-109 325-437 (496)
25 COG1819 Glycosyl transferases, 99.3 8E-12 1.7E-16 101.4 6.7 84 20-110 281-384 (406)
26 TIGR01426 MGT glycosyltransfer 99.2 9.3E-11 2E-15 93.3 7.9 83 21-110 273-375 (392)
27 cd03784 GT1_Gtf_like This fami 99.0 4E-10 8.6E-15 89.4 6.1 80 22-109 287-386 (401)
28 TIGR00661 MJ1255 conserved hyp 97.2 0.00028 6E-09 55.1 2.7 40 21-63 227-267 (321)
29 PRK12446 undecaprenyldiphospho 96.3 0.0067 1.5E-07 48.4 4.9 73 27-105 238-337 (352)
30 PF13528 Glyco_trans_1_3: Glyc 96.2 0.0081 1.7E-07 46.1 4.5 62 23-88 232-317 (318)
31 PRK00726 murG undecaprenyldiph 96.0 0.028 6E-07 43.9 6.6 64 25-92 237-325 (357)
32 PF04101 Glyco_tran_28_C: Glyc 95.6 0.002 4.2E-08 45.5 -1.1 66 23-92 55-145 (167)
33 cd03785 GT1_MurG MurG is an N- 95.2 0.11 2.5E-06 40.0 7.6 66 23-92 235-325 (350)
34 TIGR01133 murG undecaprenyldip 93.6 0.25 5.3E-06 38.1 6.2 56 33-92 244-322 (348)
35 cd04946 GT1_AmsK_like This fam 93.4 0.47 1E-05 38.2 7.7 80 24-103 290-390 (407)
36 PRK15484 lipopolysaccharide 1, 93.1 0.74 1.6E-05 36.6 8.3 78 22-101 256-354 (380)
37 PRK13609 diacylglycerol glucos 92.8 0.72 1.6E-05 36.3 7.7 62 24-92 257-339 (380)
38 PRK13608 diacylglycerol glucos 92.6 0.39 8.4E-06 38.5 6.1 74 24-104 257-352 (391)
39 COG0707 MurG UDP-N-acetylgluco 91.1 0.59 1.3E-05 37.7 5.6 75 26-104 238-338 (357)
40 cd03804 GT1_wbaZ_like This fam 90.8 1.7 3.6E-05 33.5 7.7 84 17-103 236-340 (351)
41 PLN02605 monogalactosyldiacylg 90.8 1.4 2.9E-05 35.1 7.3 61 24-91 266-347 (382)
42 TIGR00215 lpxB lipid-A-disacch 90.5 0.88 1.9E-05 36.6 6.1 80 34-118 262-375 (385)
43 cd03814 GT1_like_2 This family 88.8 3.2 7E-05 31.1 7.7 68 22-92 246-333 (364)
44 cd03817 GT1_UGDG_like This fam 87.8 3.4 7.3E-05 30.9 7.3 81 23-105 259-358 (374)
45 cd03795 GT1_like_4 This family 87.4 3.7 8E-05 31.0 7.3 67 23-92 244-333 (357)
46 cd05844 GT1_like_7 Glycosyltra 86.8 5.3 0.00012 30.5 8.0 68 23-92 245-337 (367)
47 cd03818 GT1_ExpC_like This fam 85.7 4.6 0.0001 31.9 7.3 80 23-103 281-379 (396)
48 PRK15427 colanic acid biosynth 84.3 4.6 9.9E-05 32.6 6.8 77 23-102 279-383 (406)
49 PF00534 Glycos_transf_1: Glyc 84.1 4.7 0.0001 27.6 6.0 69 22-92 72-159 (172)
50 cd03821 GT1_Bme6_like This fam 83.4 6.6 0.00014 29.2 6.9 78 23-104 262-359 (375)
51 cd03825 GT1_wcfI_like This fam 83.3 7.4 0.00016 29.4 7.3 68 22-92 243-331 (365)
52 cd03823 GT1_ExpE7_like This fa 83.3 6.6 0.00014 29.2 6.9 77 23-102 243-341 (359)
53 PRK00025 lpxB lipid-A-disaccha 83.2 2.5 5.4E-05 33.1 4.8 54 34-92 256-342 (380)
54 cd03794 GT1_wbuB_like This fam 81.7 10 0.00022 28.2 7.5 69 23-92 275-366 (394)
55 cd03800 GT1_Sucrose_synthase T 81.7 6.6 0.00014 30.2 6.6 68 23-92 283-369 (398)
56 cd03799 GT1_amsK_like This is 81.7 7.9 0.00017 29.2 6.9 68 23-92 236-328 (355)
57 cd03801 GT1_YqgM_like This fam 79.9 19 0.00041 26.3 8.3 69 22-92 255-342 (374)
58 cd03798 GT1_wlbH_like This fam 79.6 14 0.0003 27.2 7.5 68 23-92 259-345 (377)
59 cd03805 GT1_ALG2_like This fam 78.9 13 0.00027 28.9 7.4 79 23-103 280-377 (392)
60 TIGR03087 stp1 sugar transfera 78.4 14 0.0003 29.3 7.5 76 24-103 281-375 (397)
61 cd04949 GT1_gtfA_like This fam 78.2 8.8 0.00019 29.7 6.2 80 25-106 263-361 (372)
62 PRK09922 UDP-D-galactose:(gluc 77.2 22 0.00047 27.7 8.2 52 54-106 272-342 (359)
63 cd03820 GT1_amsD_like This fam 75.5 16 0.00035 26.7 6.8 49 54-103 267-332 (348)
64 cd03816 GT1_ALG1_like This fam 74.5 7.4 0.00016 31.4 5.1 73 29-105 301-399 (415)
65 TIGR00236 wecB UDP-N-acetylglu 73.7 3.6 7.7E-05 32.2 3.0 62 24-92 256-335 (365)
66 cd03807 GT1_WbnK_like This fam 72.1 23 0.00049 26.1 6.9 56 35-92 264-333 (365)
67 TIGR03449 mycothiol_MshA UDP-N 72.1 24 0.00053 27.6 7.4 79 23-103 283-381 (405)
68 PF13692 Glyco_trans_1_4: Glyc 70.7 9.1 0.0002 25.1 4.1 68 22-91 52-135 (135)
69 cd03822 GT1_ecORF704_like This 68.7 28 0.0006 26.0 6.8 78 24-103 248-347 (366)
70 cd03809 GT1_mtfB_like This fam 68.5 23 0.00051 26.4 6.4 70 22-92 252-337 (365)
71 PRK09814 beta-1,6-galactofuran 66.9 11 0.00024 29.4 4.4 51 56-110 253-318 (333)
72 cd03808 GT1_cap1E_like This fa 64.3 45 0.00097 24.4 7.1 56 35-92 259-330 (359)
73 PLN02871 UDP-sulfoquinovose:DA 61.6 53 0.0011 26.8 7.6 66 24-92 313-401 (465)
74 TIGR03088 stp2 sugar transfera 60.0 50 0.0011 25.5 7.0 57 35-92 268-339 (374)
75 cd03806 GT1_ALG11_like This fa 59.0 72 0.0016 25.8 7.9 65 22-92 304-393 (419)
76 cd03796 GT1_PIG-A_like This fa 58.6 49 0.0011 26.1 6.8 67 23-91 250-333 (398)
77 cd03811 GT1_WabH_like This fam 57.7 71 0.0015 23.2 7.6 39 24-63 247-287 (353)
78 COG4844 Uncharacterized protei 57.3 3.2 7E-05 26.1 -0.2 46 32-89 27-72 (78)
79 TIGR02918 accessory Sec system 56.3 41 0.00089 28.3 6.2 80 25-105 378-481 (500)
80 cd03812 GT1_CapH_like This fam 55.8 34 0.00073 25.8 5.2 67 24-92 250-332 (358)
81 cd04962 GT1_like_5 This family 54.0 82 0.0018 23.9 7.2 78 25-104 255-350 (371)
82 cd03802 GT1_AviGT4_like This f 53.8 66 0.0014 24.0 6.5 65 22-91 223-308 (335)
83 PRK05749 3-deoxy-D-manno-octul 53.1 30 0.00065 27.7 4.8 48 54-104 335-402 (425)
84 TIGR03590 PseG pseudaminic aci 52.8 18 0.00039 27.8 3.3 36 23-63 224-260 (279)
85 PF02684 LpxB: Lipid-A-disacch 52.2 58 0.0013 26.5 6.3 42 75-119 324-365 (373)
86 PRK10307 putative glycosyl tra 51.4 79 0.0017 25.0 6.9 79 24-103 285-386 (412)
87 TIGR02472 sucr_P_syn_N sucrose 50.2 65 0.0014 26.1 6.3 69 23-92 317-407 (439)
88 COG1519 KdtA 3-deoxy-D-manno-o 49.5 53 0.0011 27.4 5.7 61 45-111 327-407 (419)
89 cd03819 GT1_WavL_like This fam 47.4 1E+02 0.0022 23.1 6.7 65 24-90 247-329 (355)
90 PF13524 Glyco_trans_1_2: Glyc 45.8 70 0.0015 19.6 7.0 16 77-92 48-63 (92)
91 cd04955 GT1_like_6 This family 44.5 1E+02 0.0022 23.2 6.3 69 23-92 248-331 (363)
92 PLN02949 transferase, transfer 43.1 1.3E+02 0.0029 25.0 7.2 66 23-91 335-422 (463)
93 PHA01633 putative glycosyl tra 34.9 1.5E+02 0.0033 23.7 6.1 17 75-91 291-307 (335)
94 cd04951 GT1_WbdM_like This fam 34.6 1.9E+02 0.0042 21.5 7.5 66 24-91 246-326 (360)
95 cd03813 GT1_like_3 This family 34.5 1.9E+02 0.0042 23.6 6.9 38 54-92 385-443 (475)
96 PRK15179 Vi polysaccharide bio 34.5 2.2E+02 0.0048 25.2 7.5 80 23-103 574-672 (694)
97 KOG3349 Predicted glycosyltran 34.3 30 0.00066 25.2 1.8 31 29-63 69-100 (170)
98 TIGR02149 glgA_Coryne glycogen 33.4 1.4E+02 0.003 23.0 5.6 73 29-103 267-365 (388)
99 COG4671 Predicted glycosyl tra 32.5 1E+02 0.0023 25.5 4.8 63 25-90 279-364 (400)
100 PF05225 HTH_psq: helix-turn-h 30.8 1E+02 0.0022 17.1 3.7 26 77-104 1-26 (45)
101 PF12894 Apc4_WD40: Anaphase-p 30.7 29 0.00063 19.7 1.0 20 22-41 11-30 (47)
102 TIGR02400 trehalose_OtsA alpha 30.3 1.5E+02 0.0033 24.6 5.6 53 54-108 370-438 (456)
103 TIGR02095 glgA glycogen/starch 28.5 3.2E+02 0.007 22.2 8.4 51 36-90 362-436 (473)
104 PF07765 KIP1: KIP1-like prote 26.9 87 0.0019 19.8 2.8 26 77-102 19-46 (74)
105 PF06345 Drf_DAD: DRF Autoregu 25.9 48 0.001 14.4 1.0 11 53-63 3-13 (15)
106 cd03792 GT1_Trehalose_phosphor 25.5 2.5E+02 0.0055 21.6 5.9 75 24-103 253-350 (372)
107 PF15586 Imm47: Immunity prote 25.4 1.2E+02 0.0026 20.6 3.5 42 67-108 67-108 (116)
108 PF06204 CBM_X: Putative carbo 24.5 34 0.00073 21.0 0.6 21 30-50 24-44 (66)
109 COG4575 ElaB Uncharacterized c 24.2 1.3E+02 0.0028 20.3 3.4 26 92-117 37-62 (104)
110 PHA03159 hypothetical protein; 24.1 26 0.00056 24.8 0.0 13 44-58 114-126 (160)
111 TIGR02468 sucrsPsyn_pln sucros 23.9 3.1E+02 0.0068 25.7 6.8 80 23-103 548-650 (1050)
112 COG1422 Predicted membrane pro 22.7 1.4E+02 0.0031 22.5 3.7 33 83-115 62-95 (201)
113 cd03786 GT1_UDP-GlcNAc_2-Epime 22.0 1.9E+02 0.0042 22.0 4.6 50 36-92 274-338 (363)
114 KOG2635 Medium subunit of clat 21.8 1.4E+02 0.003 25.4 3.8 39 80-118 138-180 (512)
115 COG1448 TyrB Aspartate/tyrosin 21.1 1.6E+02 0.0034 24.5 4.0 25 96-120 313-337 (396)
116 PRK10017 colanic acid biosynth 20.9 3.1E+02 0.0067 22.7 5.7 49 64-112 363-415 (426)
117 TIGR03492 conserved hypothetic 20.6 1.9E+02 0.0041 23.4 4.4 53 34-92 291-365 (396)
118 PF06831 H2TH: Formamidopyrimi 20.5 1.9E+02 0.0042 18.5 3.7 24 97-120 67-90 (92)
119 COG0191 Fba Fructose/tagatose 20.2 4.5E+02 0.0097 20.9 6.3 73 45-120 207-285 (286)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.97 E-value=1.3e-30 Score=213.25 Aligned_cols=107 Identities=30% Similarity=0.601 Sum_probs=102.1
Q ss_pred CCchhHHHhhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEE
Q 044725 12 MLPREYCEEIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGME 71 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~ 71 (121)
.||++|++|+++||++++|+||.+||+||++++|||||| |||++||+++| +.||+|+.
T Consensus 313 ~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G--~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~ 390 (451)
T PLN02410 313 SLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCG--WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQ 390 (451)
T ss_pred cCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCc--hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEE
Confidence 599999999999999999999999999999999999999 99999999999 56799999
Q ss_pred ECCcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 72 INQNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 72 l~~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+...+++++|+++|+++|.+++|++||+|+++|++.+++|+.+||||+.
T Consensus 391 ~~~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~ 439 (451)
T PLN02410 391 VEGDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHN 439 (451)
T ss_pred eCCcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 9878999999999999998888999999999999999999999999963
No 2
>PLN02207 UDP-glycosyltransferase
Probab=99.96 E-value=3.8e-30 Score=211.30 Aligned_cols=106 Identities=25% Similarity=0.471 Sum_probs=97.8
Q ss_pred CCchhHHHhhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEE
Q 044725 12 MLPREYCEEIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGME 71 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~ 71 (121)
.||++|++|+++||++++|+||.+||+||++++|||||| |||++||+++| +.||+|++
T Consensus 321 ~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~G--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~ 398 (468)
T PLN02207 321 LLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCG--WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVE 398 (468)
T ss_pred cCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCc--cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEE
Confidence 599999999999999999999999999999999999999 99999999999 56999997
Q ss_pred EC--------CcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 72 IN--------QNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 72 l~--------~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+. ..+++++|+++|+++|. +++++||+||++|++++++|+.+||||++
T Consensus 399 ~~~~~~~~~~~~v~~e~i~~av~~vm~-~~~~~~r~~a~~l~~~a~~A~~~GGSS~~ 454 (468)
T PLN02207 399 LKLDYRVHSDEIVNANEIETAIRCVMN-KDNNVVRKRVMDISQMIQRATKNGGSSFA 454 (468)
T ss_pred EecccccccCCcccHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 73 14699999999999997 35779999999999999999999999974
No 3
>PLN02555 limonoid glucosyltransferase
Probab=99.96 E-value=5.7e-30 Score=210.78 Aligned_cols=108 Identities=42% Similarity=0.659 Sum_probs=101.5
Q ss_pred CCCchhHHHhhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEE
Q 044725 11 AMLPREYCEEIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGM 70 (121)
Q Consensus 11 ~~lp~~~~~~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~ 70 (121)
..||++|++++++++++++|+||.+||+||++++|||||| |||++||+++| +.||+|+
T Consensus 325 ~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G--~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv 402 (480)
T PLN02555 325 HVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCG--WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGV 402 (480)
T ss_pred hcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCC--cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceE
Confidence 3599999999999999999999999999999999999999 99999999999 6789999
Q ss_pred EEC------CcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 71 EIN------QNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 71 ~l~------~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
++. ..+++++|+++|+++|++++|+++|+||++|++++++|+.+||||+.
T Consensus 403 ~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~ 458 (480)
T PLN02555 403 RLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDR 458 (480)
T ss_pred EccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 993 26899999999999999888999999999999999999999999963
No 4
>PLN03015 UDP-glucosyl transferase
Probab=99.96 E-value=1.3e-29 Score=208.15 Aligned_cols=107 Identities=31% Similarity=0.528 Sum_probs=99.6
Q ss_pred CCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEE
Q 044725 12 MLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGM 70 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~ 70 (121)
.||++|++|+.++|+++ +|+||.+||+||+|++|+|||| |||++||+++| +.||+|+
T Consensus 323 ~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~G--wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~ 400 (470)
T PLN03015 323 SLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCG--WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAV 400 (470)
T ss_pred cCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCC--chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeE
Confidence 59999999999999755 9999999999999999999999 99999999999 6899999
Q ss_pred EEC-----CcCCHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 71 EIN-----QNVKRDEVKVLVRGMME--GDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 71 ~l~-----~~~~~~~l~~~i~~vm~--~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
++. ..+++++|+++|+++|. +++|+++|+||++|++++++|+.+||||++
T Consensus 401 ~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~ 457 (470)
T PLN03015 401 RTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYN 457 (470)
T ss_pred EecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 995 25899999999999996 367999999999999999999999999963
No 5
>PLN03004 UDP-glycosyltransferase
Probab=99.96 E-value=4.7e-29 Score=204.08 Aligned_cols=104 Identities=27% Similarity=0.442 Sum_probs=96.6
Q ss_pred CCchhHHHhhcCCceE-EeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEE
Q 044725 12 MLPREYCEEIRDRGFL-VSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGM 70 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v-~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~ 70 (121)
.||++|++|+++++++ .+|+||.+||+|+++++|||||| |||++||+++| +.||+|+
T Consensus 322 ~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G--~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~ 399 (451)
T PLN03004 322 LLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCG--WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAI 399 (451)
T ss_pred hCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCc--chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceE
Confidence 3999999999998875 59999999999999999999999 99999999999 4689999
Q ss_pred EECC----cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 71 EINQ----NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 71 ~l~~----~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
.++. .+++++|+++|+++|.++ +||+|+++|+++++.|+.+||||++
T Consensus 400 ~l~~~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 400 SMNESETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred EecCCcCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9963 479999999999999865 8999999999999999999999985
No 6
>PLN02173 UDP-glucosyl transferase family protein
Probab=99.96 E-value=4.7e-29 Score=203.99 Aligned_cols=108 Identities=32% Similarity=0.552 Sum_probs=99.3
Q ss_pred CCCchhHHHhh-cCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceE
Q 044725 11 AMLPREYCEEI-RDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTG 69 (121)
Q Consensus 11 ~~lp~~~~~~~-~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG 69 (121)
..+|++|++|+ ++++++++|+||.+||+||+|++|||||| |||++||+++| +.||+|
T Consensus 304 ~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~G 381 (449)
T PLN02173 304 SKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCG--WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVG 381 (449)
T ss_pred hcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCc--cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCce
Confidence 35899999999 46788999999999999999999999999 99999999999 578999
Q ss_pred EEECC-----cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 70 MEINQ-----NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 70 ~~l~~-----~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+.+.. .+++++|+++|+++|.+++|+++|+||++|++++++|+.+||||++
T Consensus 382 v~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~ 437 (449)
T PLN02173 382 VRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDI 437 (449)
T ss_pred EEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 98852 3699999999999999888999999999999999999999999964
No 7
>PLN02554 UDP-glycosyltransferase family protein
Probab=99.95 E-value=1.4e-28 Score=202.40 Aligned_cols=105 Identities=30% Similarity=0.500 Sum_probs=97.0
Q ss_pred CCchhHHHhhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEE
Q 044725 12 MLPREYCEEIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGME 71 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~ 71 (121)
.||++|++|+++|+++++|+||.+||+||++++|||||| |||++||+++| +.+|+|+.
T Consensus 331 ~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G--~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~ 408 (481)
T PLN02554 331 ILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCG--WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVE 408 (481)
T ss_pred hCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCc--cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEE
Confidence 379999999999999999999999999999999999999 99999999999 67899999
Q ss_pred EC------------CcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 72 IN------------QNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 72 l~------------~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+. ..+++++|+++|+++|.++ ++||+||++|++++++|+.+||||++
T Consensus 409 l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~--~~~r~~a~~l~~~~~~av~~gGss~~ 467 (481)
T PLN02554 409 IRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD--SDVRKRVKEMSEKCHVALMDGGSSHT 467 (481)
T ss_pred eeccccccccccccCeEcHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhcCCChHHH
Confidence 85 2579999999999999632 48999999999999999999999963
No 8
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=99.95 E-value=3.1e-28 Score=200.53 Aligned_cols=107 Identities=30% Similarity=0.559 Sum_probs=99.6
Q ss_pred CCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEE
Q 044725 12 MLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGM 70 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~ 70 (121)
.||++|++|+.++|+++ +|+||.+||+|+++++|||||| |||++||+++| +.+|+|+
T Consensus 326 ~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G--~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv 403 (481)
T PLN02992 326 YLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCG--WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAV 403 (481)
T ss_pred hCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCc--hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeE
Confidence 59999999999999865 9999999999999999999999 99999999999 4789999
Q ss_pred EECC---cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhh--cCCCCCC
Q 044725 71 EINQ---NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATY--IGDHLTR 120 (121)
Q Consensus 71 ~l~~---~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~--~gGss~~ 120 (121)
.++. .+++++|+++|+++|.+++|+.||++++++++.+++|+. +||||++
T Consensus 404 ~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~ 458 (481)
T PLN02992 404 RSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHE 458 (481)
T ss_pred EecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHH
Confidence 9964 489999999999999988899999999999999999994 5999963
No 9
>PLN02534 UDP-glycosyltransferase
Probab=99.95 E-value=2.8e-28 Score=201.21 Aligned_cols=107 Identities=35% Similarity=0.574 Sum_probs=98.2
Q ss_pred CCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEE
Q 044725 12 MLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGM 70 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~ 70 (121)
.+|++|.+++.++++++ .|+||.+||.|+++++|||||| |||++||+++| +.||+|+
T Consensus 332 ~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G--~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv 409 (491)
T PLN02534 332 LVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCG--WNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGV 409 (491)
T ss_pred cCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCc--cHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceE
Confidence 57999999998888765 9999999999999999999999 99999999999 7899999
Q ss_pred EEC-------------C-cCCHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 71 EIN-------------Q-NVKRDEVKVLVRGMME--GDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 71 ~l~-------------~-~~~~~~l~~~i~~vm~--~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
++. . .+++++|+++|+++|. +++|+++|+||++|++++++|+.+||||++
T Consensus 410 ~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~ 475 (491)
T PLN02534 410 RVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHI 475 (491)
T ss_pred EecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 883 1 3799999999999997 577999999999999999999999999974
No 10
>PLN00164 glucosyltransferase; Provisional
Probab=99.95 E-value=5.4e-28 Score=198.96 Aligned_cols=107 Identities=30% Similarity=0.520 Sum_probs=98.7
Q ss_pred CCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEE
Q 044725 12 MLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGM 70 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~ 70 (121)
.||++|++|+.++|+++ .|+||.+||+|+++++|||||| |||++||+++| +.||+|+
T Consensus 327 ~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~G--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~ 404 (480)
T PLN00164 327 LLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCG--WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAV 404 (480)
T ss_pred hCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecc--cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEE
Confidence 49999999999999877 8999999999999999999999 99999999999 5689999
Q ss_pred EECC------cCCHHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 71 EINQ------NVKRDEVKVLVRGMMEGD--KGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 71 ~l~~------~~~~~~l~~~i~~vm~~~--~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
.+.. .+++++|+++|+++|.++ +|+.+|++|++|++++++|+.+||||++
T Consensus 405 ~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~ 462 (480)
T PLN00164 405 AMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYA 462 (480)
T ss_pred EeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 9852 379999999999999864 4889999999999999999999999974
No 11
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=99.95 E-value=4.9e-28 Score=198.26 Aligned_cols=106 Identities=29% Similarity=0.455 Sum_probs=96.6
Q ss_pred CCchhHHHhhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEE
Q 044725 12 MLPREYCEEIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGME 71 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~ 71 (121)
.+|++|++|+++||++++|+||.+||+||+|++|||||| |||++||+++| +.||+|+.
T Consensus 316 ~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G--~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~ 393 (455)
T PLN02152 316 EKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCG--WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVR 393 (455)
T ss_pred ccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCC--cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEE
Confidence 468999999999999999999999999999999999999 99999999999 45777777
Q ss_pred ECC----cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 72 INQ----NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 72 l~~----~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+.. .+++++|+++|+++|. +++++||+||++|++++++|+.+||||++
T Consensus 394 ~~~~~~~~~~~e~l~~av~~vm~-~~~~~~r~~a~~~~~~~~~a~~~ggsS~~ 445 (455)
T PLN02152 394 VRENSEGLVERGEIRRCLEAVME-EKSVELRESAEKWKRLAIEAGGEGGSSDK 445 (455)
T ss_pred eecCcCCcCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 742 4699999999999997 45778999999999999999999999974
No 12
>PLN02210 UDP-glucosyl transferase
Probab=99.95 E-value=7.4e-28 Score=197.11 Aligned_cols=106 Identities=31% Similarity=0.477 Sum_probs=97.5
Q ss_pred CchhHHHhh-cCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEE
Q 044725 13 LPREYCEEI-RDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGME 71 (121)
Q Consensus 13 lp~~~~~~~-~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~ 71 (121)
.|++|.+++ +++|++++|+||.+||+|++|++|||||| |||++||+++| +.||+|+.
T Consensus 313 ~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G--~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~ 390 (456)
T PLN02210 313 NVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCG--WNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVR 390 (456)
T ss_pred chhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCC--cccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEE
Confidence 457788888 48999999999999999999999999999 99999999999 45999999
Q ss_pred ECC-----cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 72 INQ-----NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 72 l~~-----~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+.. .+++++|+++|+++|.+++|++||+||++|++.+++|+.+||||++
T Consensus 391 l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~ 444 (456)
T PLN02210 391 MRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSAR 444 (456)
T ss_pred EeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 952 5899999999999999888999999999999999999999999964
No 13
>PLN02167 UDP-glycosyltransferase family protein
Probab=99.95 E-value=6.5e-28 Score=198.13 Aligned_cols=105 Identities=30% Similarity=0.472 Sum_probs=97.3
Q ss_pred CCchhHHHhhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEE
Q 044725 12 MLPREYCEEIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGME 71 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~ 71 (121)
.||++|++|+.++|+++.|+||.+||+||++++|||||| |||++||+++| +.||+|+.
T Consensus 329 ~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G--~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~ 406 (475)
T PLN02167 329 PLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCG--WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVE 406 (475)
T ss_pred hCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCC--cccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEE
Confidence 599999999999999999999999999999999999999 99999999999 57899998
Q ss_pred ECC--------cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 72 INQ--------NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 72 l~~--------~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+.. .+++++|+++|+++|.++ +.||+||+++++.+++|+.+||||++
T Consensus 407 ~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gGsS~~ 461 (475)
T PLN02167 407 LRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFV 461 (475)
T ss_pred eecccccccCCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 852 469999999999999754 48999999999999999999999963
No 14
>PLN03007 UDP-glucosyltransferase family protein
Probab=99.95 E-value=7.7e-28 Score=197.90 Aligned_cols=107 Identities=26% Similarity=0.482 Sum_probs=96.5
Q ss_pred CCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEE
Q 044725 12 MLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGM 70 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~ 70 (121)
.||++|.+|+.+++.++ .|+||.+||+|+++++|||||| |||++||+++| +.|++|+
T Consensus 333 ~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G--~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~ 410 (482)
T PLN03007 333 WLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCG--WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGV 410 (482)
T ss_pred cCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCc--chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhccee
Confidence 59999999998888755 9999999999999999999999 99999999999 4456666
Q ss_pred EEC---------CcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 71 EIN---------QNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 71 ~l~---------~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
.+. ..+++++|+++|+++|.+++|++||+||++|++++++|+.+||||++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~ 469 (482)
T PLN03007 411 SVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFN 469 (482)
T ss_pred EeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 652 25799999999999999888999999999999999999999999963
No 15
>PLN02208 glycosyltransferase family protein
Probab=99.94 E-value=3.4e-27 Score=192.67 Aligned_cols=103 Identities=24% Similarity=0.354 Sum_probs=92.0
Q ss_pred CCCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceE
Q 044725 11 AMLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTG 69 (121)
Q Consensus 11 ~~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG 69 (121)
..+|++|++|+.++++++ +|+||.+||+||+|++|||||| |||++||+++| +.||+|
T Consensus 298 ~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG--~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~g 375 (442)
T PLN02208 298 EGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCG--PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVS 375 (442)
T ss_pred hhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCC--chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhcee
Confidence 359999999999998866 9999999999999999999999 99999999999 469999
Q ss_pred EEECC----cCCHHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHHHHhhcCCCCC
Q 044725 70 MEINQ----NVKRDEVKVLVRGMMEGD--KGKPIKCMALEWKKKAEAATYIGDHLT 119 (121)
Q Consensus 70 ~~l~~----~~~~~~l~~~i~~vm~~~--~g~~~r~~a~~l~~~~~~a~~~gGss~ 119 (121)
+.+.. .+++++|+++|+++|+++ +|+.+|+++++|++.+. .+|||+
T Consensus 376 v~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~ 427 (442)
T PLN02208 376 VEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLT 427 (442)
T ss_pred EEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHH
Confidence 99964 289999999999999764 58899999999999962 367775
No 16
>PLN00414 glycosyltransferase family protein
Probab=99.94 E-value=1.8e-26 Score=188.56 Aligned_cols=103 Identities=23% Similarity=0.377 Sum_probs=93.1
Q ss_pred CCCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceE
Q 044725 11 AMLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTG 69 (121)
Q Consensus 11 ~~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG 69 (121)
..||++|++|++++|+++ +|+||.+||+|+++++|||||| |||++||+++| +.+|+|
T Consensus 299 ~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G--~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g 376 (446)
T PLN00414 299 EALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCG--FGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVS 376 (446)
T ss_pred hhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCc--hhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeE
Confidence 369999999999999976 8999999999999999999999 99999999999 579999
Q ss_pred EEECC----cCCHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHhhcCCCC
Q 044725 70 MEINQ----NVKRDEVKVLVRGMMEG--DKGKPIKCMALEWKKKAEAATYIGDHL 118 (121)
Q Consensus 70 ~~l~~----~~~~~~l~~~i~~vm~~--~~g~~~r~~a~~l~~~~~~a~~~gGss 118 (121)
+.+.. .+++++|+++++++|.+ ++|++||+++++|++.+ +++||||
T Consensus 377 ~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~---~~~gg~s 428 (446)
T PLN00414 377 VKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETL---VSPGLLS 428 (446)
T ss_pred EEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH---HcCCCcH
Confidence 99953 48999999999999976 45789999999999995 6789944
No 17
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.93 E-value=2e-26 Score=189.62 Aligned_cols=106 Identities=23% Similarity=0.383 Sum_probs=96.2
Q ss_pred CCCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceE
Q 044725 11 AMLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTG 69 (121)
Q Consensus 11 ~~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG 69 (121)
..||++|.+|+.++++++ .|+||.+||+|+++++|||||| |||++||+++| +.||+|
T Consensus 330 ~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G--~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG 407 (477)
T PLN02863 330 SNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCG--WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVA 407 (477)
T ss_pred hhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCC--chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhcee
Confidence 359999999999988765 8999999999999999999999 99999999999 578999
Q ss_pred EEECC----cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 70 MEINQ----NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 70 ~~l~~----~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+++.. .+++++|+++|+++|. ++++||+||++|++++++|+.+||||++
T Consensus 408 ~~~~~~~~~~~~~~~v~~~v~~~m~--~~~~~r~~a~~l~e~a~~Av~~gGSS~~ 460 (477)
T PLN02863 408 VRVCEGADTVPDSDELARVFMESVS--ENQVERERAKELRRAALDAIKERGSSVK 460 (477)
T ss_pred EEeccCCCCCcCHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHhccCCcHHH
Confidence 99942 4689999999999994 3569999999999999999999999963
No 18
>PLN02764 glycosyltransferase family protein
Probab=99.93 E-value=1.8e-26 Score=188.95 Aligned_cols=104 Identities=24% Similarity=0.423 Sum_probs=93.1
Q ss_pred CCCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceE
Q 044725 11 AMLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTG 69 (121)
Q Consensus 11 ~~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG 69 (121)
..||++|++|++++|+++ +|+||.+||+|+++++|||||| |||++||+++| +.+|+|
T Consensus 304 ~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G--~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~g 381 (453)
T PLN02764 304 EALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCG--FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVS 381 (453)
T ss_pred hhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCC--chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceE
Confidence 469999999999999866 8999999999999999999999 99999999999 568999
Q ss_pred EEECC----cCCHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 70 MEINQ----NVKRDEVKVLVRGMMEG--DKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 70 ~~l~~----~~~~~~l~~~i~~vm~~--~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+.+.. .+++++|+++|+++|.+ ++|+.+|+++++|++.+ .+||||++
T Consensus 382 v~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~----~~~GSS~~ 434 (453)
T PLN02764 382 VEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETL----ASPGLLTG 434 (453)
T ss_pred EEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH----HhcCCHHH
Confidence 98742 48999999999999976 45889999999999998 46788863
No 19
>PLN02670 transferase, transferring glycosyl groups
Probab=99.93 E-value=3.2e-26 Score=188.31 Aligned_cols=97 Identities=34% Similarity=0.548 Sum_probs=90.6
Q ss_pred CCchhHHHhhcCCceEE-eecchhhhccCCCCcceeecCCCcchhHHHHHHcc-------------------cccceEEE
Q 044725 12 MLPREYCEEIRDRGFLV-SWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-------------------SSRGTGME 71 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~-~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-------------------~~~gvG~~ 71 (121)
.||++|++|+.+||+++ +|+||.+||+||++++|+|||| |||++||+++| +.+|+|+.
T Consensus 327 ~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~ 404 (472)
T PLN02670 327 MLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCG--WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLE 404 (472)
T ss_pred cCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCC--cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEE
Confidence 69999999999999875 9999999999999999999999 99999999999 56899999
Q ss_pred ECC-----cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Q 044725 72 INQ-----NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEA 110 (121)
Q Consensus 72 l~~-----~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~ 110 (121)
+.. .+++++|+++|+++|.+++|++||+||++|++.+++
T Consensus 405 l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~ 448 (472)
T PLN02670 405 VPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD 448 (472)
T ss_pred eeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC
Confidence 963 489999999999999888899999999999999886
No 20
>PLN02562 UDP-glycosyltransferase
Probab=99.93 E-value=3.1e-26 Score=187.20 Aligned_cols=102 Identities=28% Similarity=0.438 Sum_probs=94.4
Q ss_pred CCchhHHHhhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEE
Q 044725 12 MLPREYCEEIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGME 71 (121)
Q Consensus 12 ~lp~~~~~~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~ 71 (121)
.||++|++++++|+++++|+||.+||+||++++|||||| |||++||+++| +.+|+|+.
T Consensus 317 ~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G--~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~ 394 (448)
T PLN02562 317 GLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCG--WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVR 394 (448)
T ss_pred hCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCc--chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeE
Confidence 599999999999999999999999999999999999999 99999999999 34899998
Q ss_pred ECCcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 72 INQNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 72 l~~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+. .+++++|+++|+++|.++ +||+||+++++.++.+ ++||||++
T Consensus 395 ~~-~~~~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~gGSS~~ 438 (448)
T PLN02562 395 IS-GFGQKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EARLRSMM 438 (448)
T ss_pred eC-CCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCCCCHHH
Confidence 85 589999999999999876 8999999999999887 77899963
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=99.93 E-value=7.7e-26 Score=185.07 Aligned_cols=104 Identities=31% Similarity=0.467 Sum_probs=94.1
Q ss_pred hhHHHhhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEEECC
Q 044725 15 REYCEEIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGMEINQ 74 (121)
Q Consensus 15 ~~~~~~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~l~~ 74 (121)
.+|.++++++++++.|+||.+||+||++++|||||| |||++||+++| +.||+|+.+..
T Consensus 315 ~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG--~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~ 392 (459)
T PLN02448 315 SRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCG--WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKR 392 (459)
T ss_pred hhHhHhccCCEEEeccCCHHHHhccCccceEEecCc--hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEec
Confidence 367777778999999999999999999999999999 99999999999 45889988842
Q ss_pred ------cCCHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 75 ------NVKRDEVKVLVRGMMEG--DKGKPIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 75 ------~~~~~~l~~~i~~vm~~--~~g~~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
.+++++|+++|+++|.+ ++|++||+||++|++++++|+.+||||++
T Consensus 393 ~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~ 446 (459)
T PLN02448 393 EVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDT 446 (459)
T ss_pred ccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 47999999999999985 47899999999999999999999999963
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.85 E-value=8.1e-22 Score=160.91 Aligned_cols=86 Identities=26% Similarity=0.454 Sum_probs=74.0
Q ss_pred hcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc-------------------cccceEEEECC-cCCHHH
Q 044725 21 IRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-------------------SSRGTGMEINQ-NVKRDE 80 (121)
Q Consensus 21 ~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-------------------~~~gvG~~l~~-~~~~~~ 80 (121)
++.+.++++|+||.+||+||++++|||||| |||++||+++| +..|+|+.++. +++.++
T Consensus 321 l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG--~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~ 398 (500)
T PF00201_consen 321 LPKNVLIVKWLPQNDLLAHPRVKLFITHGG--LNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEE 398 (500)
T ss_dssp HHTTEEEESS--HHHHHTSTTEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHH
T ss_pred ccceEEEeccccchhhhhcccceeeeeccc--cchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHH
Confidence 346788999999999999999999999999 99999999999 67899999985 899999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Q 044725 81 VKVLVRGMMEGDKGKPIKCMALEWKKKAEAA 111 (121)
Q Consensus 81 l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a 111 (121)
|.++|++||+++ +|++||++++.++++-
T Consensus 399 l~~ai~~vl~~~---~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 399 LRAAIREVLENP---SYKENAKRLSSLFRDR 426 (500)
T ss_dssp HHHHHHHHHHSH---HHHHHHHHHHHTTT--
T ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHHhcC
Confidence 999999999987 9999999999998863
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=99.76 E-value=1.8e-18 Score=143.38 Aligned_cols=85 Identities=20% Similarity=0.293 Sum_probs=79.6
Q ss_pred hcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc-------------------cccceEEEECC-cCCHHH
Q 044725 21 IRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-------------------SSRGTGMEINQ-NVKRDE 80 (121)
Q Consensus 21 ~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-------------------~~~gvG~~l~~-~~~~~~ 80 (121)
.++|.++.+|+||.+||+||++++|||||| ++|++||+++| +..|+|+.++. .++.++
T Consensus 344 ~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG--~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 344 LPANVLTQKWFPQRAVLKHKNVKAFVTQGG--VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred CCCceEEecCCCHHHHhcCCCCCEEEecCC--cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 456888999999999999999999999999 99999999999 67899999986 789999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Q 044725 81 VKVLVRGMMEGDKGKPIKCMALEWKKKAEA 110 (121)
Q Consensus 81 l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~ 110 (121)
|.++|+++|.++ +||+||+++++.+++
T Consensus 422 l~~ai~~vl~~~---~y~~~a~~ls~~~~~ 448 (507)
T PHA03392 422 LVLAIVDVIENP---KYRKNLKELRHLIRH 448 (507)
T ss_pred HHHHHHHHhCCH---HHHHHHHHHHHHHHh
Confidence 999999999987 999999999999987
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.72 E-value=1.1e-17 Score=136.16 Aligned_cols=92 Identities=27% Similarity=0.440 Sum_probs=75.5
Q ss_pred CchhHHHhhcCCceEEeecchhhh-ccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEE
Q 044725 13 LPREYCEEIRDRGFLVSWSPQEQV-LCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGME 71 (121)
Q Consensus 13 lp~~~~~~~~~~g~v~~W~pQ~~i-L~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~ 71 (121)
+|++|.++-++++...+|+||.++ |.|+++++|||||| ||||+|++++| +.+++++.
T Consensus 325 ~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG--~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~ 402 (496)
T KOG1192|consen 325 FPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGG--WNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVL 402 (496)
T ss_pred hhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCc--ccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEE
Confidence 445555441223445579999999 59999999999999 99999999999 66777777
Q ss_pred ECCcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Q 044725 72 INQNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAE 109 (121)
Q Consensus 72 l~~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~ 109 (121)
...+.+..++..++++++.++ +|+++|+++++..+
T Consensus 403 ~~~~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 403 DKRDLVSEELLEAIKEILENE---EYKEAAKRLSEILR 437 (496)
T ss_pred ehhhcCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHH
Confidence 766676666999999999988 99999999999876
No 25
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.27 E-value=8e-12 Score=101.38 Aligned_cols=84 Identities=15% Similarity=0.283 Sum_probs=77.1
Q ss_pred hhcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc-------------------cccceEEEECC-cCCHH
Q 044725 20 EIRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-------------------SSRGTGMEINQ-NVKRD 79 (121)
Q Consensus 20 ~~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-------------------~~~gvG~~l~~-~~~~~ 79 (121)
.++++..+..|+||..+|.+.++ |||||| .|||+|+|++| ++.|.|+.+.. ..+..
T Consensus 281 ~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG--~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~ 356 (406)
T COG1819 281 NVPDNVIVADYVPQLELLPRADA--VIHHGG--AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEE 356 (406)
T ss_pred cCCCceEEecCCCHHHHhhhcCE--EEecCC--cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHH
Confidence 45668889999999999999985 999999 99999999999 67899998886 79999
Q ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Q 044725 80 EVKVLVRGMMEGDKGKPIKCMALEWKKKAEA 110 (121)
Q Consensus 80 ~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~ 110 (121)
.+.++|++||.++ .|++++.++++.++.
T Consensus 357 ~l~~av~~vL~~~---~~~~~~~~~~~~~~~ 384 (406)
T COG1819 357 RLRAAVNEVLADD---SYRRAAERLAEEFKE 384 (406)
T ss_pred HHHHHHHHHhcCH---HHHHHHHHHHHHhhh
Confidence 9999999999988 999999999998876
No 26
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.17 E-value=9.3e-11 Score=93.26 Aligned_cols=83 Identities=20% Similarity=0.304 Sum_probs=73.7
Q ss_pred hcCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc-------------------cccceEEEECC-cCCHHH
Q 044725 21 IRDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-------------------SSRGTGMEINQ-NVKRDE 80 (121)
Q Consensus 21 ~~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-------------------~~~gvG~~l~~-~~~~~~ 80 (121)
.+++..+..|+||.++|.|.+ +|||||| +++++|++++| ...|+|..+.. .++.++
T Consensus 273 ~~~~v~~~~~~p~~~ll~~~~--~~I~hgG--~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~ 348 (392)
T TIGR01426 273 LPPNVEVRQWVPQLEILKKAD--AFITHGG--MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEK 348 (392)
T ss_pred CCCCeEEeCCCCHHHHHhhCC--EEEECCC--chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHH
Confidence 456778889999999999876 6999999 99999999999 56789988875 789999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Q 044725 81 VKVLVRGMMEGDKGKPIKCMALEWKKKAEA 110 (121)
Q Consensus 81 l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~ 110 (121)
|.++|+++|.++ +|+++++++++.++.
T Consensus 349 l~~ai~~~l~~~---~~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 349 LREAVLAVLSDP---RYAERLRKMRAEIRE 375 (392)
T ss_pred HHHHHHHHhcCH---HHHHHHHHHHHHHHH
Confidence 999999999887 899999999988775
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.04 E-value=4e-10 Score=89.44 Aligned_cols=80 Identities=16% Similarity=0.289 Sum_probs=66.1
Q ss_pred cCCceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc-------------------cccceEEEECC-cCCHHHH
Q 044725 22 RDRGFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-------------------SSRGTGMEINQ-NVKRDEV 81 (121)
Q Consensus 22 ~~~g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-------------------~~~gvG~~l~~-~~~~~~l 81 (121)
+++.++..|+||..+|.|.+ +|||||| ++|++|++++| +..|+|+.+.. .++.++|
T Consensus 287 ~~~v~~~~~~p~~~ll~~~d--~~I~hgG--~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l 362 (401)
T cd03784 287 PDNVRVVDFVPHDWLLPRCA--AVVHHGG--AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERL 362 (401)
T ss_pred CCceEEeCCCCHHHHhhhhh--eeeecCC--chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHH
Confidence 46778889999999999966 5999999 99999999999 57788888765 5799999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHH
Q 044725 82 KVLVRGMMEGDKGKPIKCMALEWKKKAE 109 (121)
Q Consensus 82 ~~~i~~vm~~~~g~~~r~~a~~l~~~~~ 109 (121)
.+++++++.+ .+++++.++.+.++
T Consensus 363 ~~al~~~l~~----~~~~~~~~~~~~~~ 386 (401)
T cd03784 363 AAALRRLLDP----PSRRRAAALLRRIR 386 (401)
T ss_pred HHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 9999999984 45566666655543
No 28
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.17 E-value=0.00028 Score=55.09 Aligned_cols=40 Identities=13% Similarity=0.032 Sum_probs=30.3
Q ss_pred hcCCceEEeecchhhhccC-CCCcceeecCCCcchhHHHHHHcc
Q 044725 21 IRDRGFLVSWSPQEQVLCH-PSDVAFLTHSRWNWNSTIESLSSM 63 (121)
Q Consensus 21 ~~~~g~v~~W~pQ~~iL~h-~~v~~fvtH~G~~~ns~~Eal~~G 63 (121)
++++..+..|.|+ +++.+ +...+||||+| .+++.|++++|
T Consensus 227 ~~~~v~~~~~~~~-~~~~~l~~ad~vI~~~G--~~t~~Ea~~~g 267 (321)
T TIGR00661 227 YNENVEIRRITTD-NFKELIKNAELVITHGG--FSLISEALSLG 267 (321)
T ss_pred cCCCEEEEECChH-HHHHHHHhCCEEEECCC--hHHHHHHHHcC
Confidence 3567777889882 23333 44557999999 99999999999
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=96.35 E-value=0.0067 Score=48.37 Aligned_cols=73 Identities=11% Similarity=0.171 Sum_probs=55.1
Q ss_pred EEeec-ch-hhhccCCCCcceeecCCCcchhHHHHHHcc------------------------cccceEEEECC-cCCHH
Q 044725 27 LVSWS-PQ-EQVLCHPSDVAFLTHSRWNWNSTIESLSSM------------------------SSRGTGMEINQ-NVKRD 79 (121)
Q Consensus 27 v~~W~-pQ-~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G------------------------~~~gvG~~l~~-~~~~~ 79 (121)
+..++ +. .+++++++ ++|||+| .+++.|++++| ...|++..+.. +++.+
T Consensus 238 ~~~f~~~~m~~~~~~ad--lvIsr~G--~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~ 313 (352)
T PRK12446 238 QFEYVHGELPDILAITD--FVISRAG--SNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVN 313 (352)
T ss_pred EecchhhhHHHHHHhCC--EEEECCC--hhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHH
Confidence 44554 32 35778877 5999999 99999999999 45788888764 78999
Q ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHH
Q 044725 80 EVKVLVRGMMEGDKGKPIKCMALEWK 105 (121)
Q Consensus 80 ~l~~~i~~vm~~~~g~~~r~~a~~l~ 105 (121)
.|.+++.+++.++ +.|++++++++
T Consensus 314 ~l~~~l~~ll~~~--~~~~~~~~~~~ 337 (352)
T PRK12446 314 SLIKHVEELSHNN--EKYKTALKKYN 337 (352)
T ss_pred HHHHHHHHHHcCH--HHHHHHHHHcC
Confidence 9999999999764 25666665543
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=96.18 E-value=0.0081 Score=46.11 Aligned_cols=62 Identities=10% Similarity=0.245 Sum_probs=47.4
Q ss_pred CCceEEeec--chhhhccCCCCcceeecCCCcchhHHHHHHcc---------------------cccceEEEECC-cCCH
Q 044725 23 DRGFLVSWS--PQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM---------------------SSRGTGMEINQ-NVKR 78 (121)
Q Consensus 23 ~~g~v~~W~--pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G---------------------~~~gvG~~l~~-~~~~ 78 (121)
++..+.++. .-.++|+.++ ++|||+| .++++|+++.| ++.|+|..++. .+++
T Consensus 232 ~ni~~~~~~~~~~~~~m~~ad--~vIs~~G--~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~ 307 (318)
T PF13528_consen 232 GNIHVRPFSTPDFAELMAAAD--LVISKGG--YTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTP 307 (318)
T ss_pred CCEEEeecChHHHHHHHHhCC--EEEECCC--HHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCH
Confidence 444455554 3355777665 5999999 99999999999 67788888874 7888
Q ss_pred HHHHHHHHHH
Q 044725 79 DEVKVLVRGM 88 (121)
Q Consensus 79 ~~l~~~i~~v 88 (121)
+.|++.|+++
T Consensus 308 ~~l~~~l~~~ 317 (318)
T PF13528_consen 308 ERLAEFLERL 317 (318)
T ss_pred HHHHHHHhcC
Confidence 8888888754
No 31
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=95.96 E-value=0.028 Score=43.91 Aligned_cols=64 Identities=8% Similarity=0.105 Sum_probs=48.9
Q ss_pred ceEEeecc-hhhhccCCCCcceeecCCCcchhHHHHHHcc-----------------------cccceEEEECC-cCCHH
Q 044725 25 GFLVSWSP-QEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-----------------------SSRGTGMEINQ-NVKRD 79 (121)
Q Consensus 25 g~v~~W~p-Q~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-----------------------~~~gvG~~l~~-~~~~~ 79 (121)
+.+..|.. ..++++..++ |++|+| .++++|++.+| .+.|.|..+.. +++.+
T Consensus 237 v~~~g~~~~~~~~~~~~d~--~i~~~g--~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~ 312 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAADL--VICRAG--ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPE 312 (357)
T ss_pred EEEeehHhhHHHHHHhCCE--EEECCC--HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHH
Confidence 34567763 3567777775 999999 89999999999 12356666653 56799
Q ss_pred HHHHHHHHHhcCC
Q 044725 80 EVKVLVRGMMEGD 92 (121)
Q Consensus 80 ~l~~~i~~vm~~~ 92 (121)
++.++|.+++.++
T Consensus 313 ~l~~~i~~ll~~~ 325 (357)
T PRK00726 313 KLAEKLLELLSDP 325 (357)
T ss_pred HHHHHHHHHHcCH
Confidence 9999999999876
No 32
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=95.60 E-value=0.002 Score=45.53 Aligned_cols=66 Identities=8% Similarity=0.227 Sum_probs=48.8
Q ss_pred CCceEEeecc-hhhhccCCCCcceeecCCCcchhHHHHHHcc-----------------------cccceEEEECC-cCC
Q 044725 23 DRGFLVSWSP-QEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-----------------------SSRGTGMEINQ-NVK 77 (121)
Q Consensus 23 ~~g~v~~W~p-Q~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-----------------------~~~gvG~~l~~-~~~ 77 (121)
.+..+..+.+ -..++...++ .|||+| .+++.|++..| ...|.|..+.. ..+
T Consensus 55 ~~v~~~~~~~~m~~~m~~aDl--vIs~aG--~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~ 130 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAADL--VISHAG--AGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELN 130 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHSE--EEECS---CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-S
T ss_pred CcEEEEechhhHHHHHHHcCE--EEeCCC--ccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCC
Confidence 3566788888 4567777774 999999 99999999999 34455555543 456
Q ss_pred HHHHHHHHHHHhcCC
Q 044725 78 RDEVKVLVRGMMEGD 92 (121)
Q Consensus 78 ~~~l~~~i~~vm~~~ 92 (121)
.++|.++|.+++.++
T Consensus 131 ~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 131 PEELAEAIEELLSDP 145 (167)
T ss_dssp CCCHHHHHHCHCCCH
T ss_pred HHHHHHHHHHHHcCc
Confidence 888999999988765
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=95.24 E-value=0.11 Score=39.97 Aligned_cols=66 Identities=6% Similarity=0.046 Sum_probs=49.3
Q ss_pred CCceEEeec-chhhhccCCCCcceeecCCCcchhHHHHHHcc------c-----------------ccceEEEECC-cCC
Q 044725 23 DRGFLVSWS-PQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM------S-----------------SRGTGMEINQ-NVK 77 (121)
Q Consensus 23 ~~g~v~~W~-pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G------~-----------------~~gvG~~l~~-~~~ 77 (121)
++..+..|. .-..+|+..++ |++++| .++++||+.+| . +.|.|..+.. +.+
T Consensus 235 ~~v~~~g~~~~~~~~l~~ad~--~v~~sg--~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~ 310 (350)
T cd03785 235 VNYEVFPFIDDMAAAYAAADL--VISRAG--ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELT 310 (350)
T ss_pred CCeEEeehhhhHHHHHHhcCE--EEECCC--HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCC
Confidence 456666776 33557777775 889999 89999999999 0 1355666654 358
Q ss_pred HHHHHHHHHHHhcCC
Q 044725 78 RDEVKVLVRGMMEGD 92 (121)
Q Consensus 78 ~~~l~~~i~~vm~~~ 92 (121)
.+++.++++.++.++
T Consensus 311 ~~~l~~~i~~ll~~~ 325 (350)
T cd03785 311 PERLAAALLELLSDP 325 (350)
T ss_pred HHHHHHHHHHHhcCH
Confidence 999999999999765
No 34
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=93.64 E-value=0.25 Score=38.06 Aligned_cols=56 Identities=9% Similarity=0.100 Sum_probs=41.7
Q ss_pred hhhhccCCCCcceeecCCCcchhHHHHHHcc-------c---------------ccceEEEECC-cCCHHHHHHHHHHHh
Q 044725 33 QEQVLCHPSDVAFLTHSRWNWNSTIESLSSM-------S---------------SRGTGMEINQ-NVKRDEVKVLVRGMM 89 (121)
Q Consensus 33 Q~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-------~---------------~~gvG~~l~~-~~~~~~l~~~i~~vm 89 (121)
-..+|+..++ |++++| -++++||+.+| . ..+.|..+.. +.+.+++.+++..++
T Consensus 244 ~~~~l~~ad~--~v~~~g--~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 244 MAAAYAAADL--VISRAG--ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred HHHHHHhCCE--EEECCC--hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHH
Confidence 3556777774 899999 88899999999 0 1234555433 457999999999999
Q ss_pred cCC
Q 044725 90 EGD 92 (121)
Q Consensus 90 ~~~ 92 (121)
.++
T Consensus 320 ~~~ 322 (348)
T TIGR01133 320 LDP 322 (348)
T ss_pred cCH
Confidence 876
No 35
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=93.42 E-value=0.47 Score=38.21 Aligned_cols=80 Identities=13% Similarity=0.107 Sum_probs=49.9
Q ss_pred CceEEeecchhh---hccCCCCcceeecCCC--cchhHHHHHHcc---------------cccceEEEECCcCCHHHHHH
Q 044725 24 RGFLVSWSPQEQ---VLCHPSDVAFLTHSRW--NWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKV 83 (121)
Q Consensus 24 ~g~v~~W~pQ~~---iL~h~~v~~fvtH~G~--~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~ 83 (121)
+..+..|+|+.+ ++...+..+|+..+-. .-++++||+.+| .+...|..+....+.+++.+
T Consensus 290 ~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~ 369 (407)
T cd04946 290 SVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVS 369 (407)
T ss_pred eEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHH
Confidence 345668898765 3444344456654431 126799999999 22335666654457899999
Q ss_pred HHHHHhcCCC-cHHHHHHHHH
Q 044725 84 LVRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 84 ~i~~vm~~~~-g~~~r~~a~~ 103 (121)
+|.+++.+++ ...+++++.+
T Consensus 370 ~I~~ll~~~~~~~~m~~~ar~ 390 (407)
T cd04946 370 SLSKFIDNEEEYQTMREKARE 390 (407)
T ss_pred HHHHHHhCHHHHHHHHHHHHH
Confidence 9999998652 2344444444
No 36
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=93.11 E-value=0.74 Score=36.64 Aligned_cols=78 Identities=14% Similarity=0.156 Sum_probs=47.1
Q ss_pred cCCceEEeecchhh---hccCCCCcceeec--CCCcc-hhHHHHHHcc---------------cccceEEEECCcCCHHH
Q 044725 22 RDRGFLVSWSPQEQ---VLCHPSDVAFLTH--SRWNW-NSTIESLSSM---------------SSRGTGMEINQNVKRDE 80 (121)
Q Consensus 22 ~~~g~v~~W~pQ~~---iL~h~~v~~fvtH--~G~~~-ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~ 80 (121)
+.+..+..++|+.+ +++..++-.+-+. -| + ..++||+.+| .+-..|..+....+.++
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~--f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~ 333 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEA--FCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDS 333 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccc--cccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHH
Confidence 44556667887544 4777776333332 22 2 5689999999 12223443333457899
Q ss_pred HHHHHHHHhcCCCcHHHHHHH
Q 044725 81 VKVLVRGMMEGDKGKPIKCMA 101 (121)
Q Consensus 81 l~~~i~~vm~~~~g~~~r~~a 101 (121)
+.++|..++.+++-.++.+++
T Consensus 334 la~~I~~ll~d~~~~~~~~~a 354 (380)
T PRK15484 334 IISDINRTLADPELTQIAEQA 354 (380)
T ss_pred HHHHHHHHHcCHHHHHHHHHH
Confidence 999999999876322333333
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=92.76 E-value=0.72 Score=36.33 Aligned_cols=62 Identities=11% Similarity=0.080 Sum_probs=46.1
Q ss_pred CceEEeecchh-hhccCCCCcceeecCCCcchhHHHHHHcc------c-c-------------cceEEEECCcCCHHHHH
Q 044725 24 RGFLVSWSPQE-QVLCHPSDVAFLTHSRWNWNSTIESLSSM------S-S-------------RGTGMEINQNVKRDEVK 82 (121)
Q Consensus 24 ~g~v~~W~pQ~-~iL~h~~v~~fvtH~G~~~ns~~Eal~~G------~-~-------------~gvG~~l~~~~~~~~l~ 82 (121)
+..+..|+++. +++++.++ |++..| ..+++||+.+| . . .|.++. ..+.+++.
T Consensus 257 ~v~~~g~~~~~~~l~~~aD~--~v~~~g--g~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~---~~~~~~l~ 329 (380)
T PRK13609 257 ALKVFGYVENIDELFRVTSC--MITKPG--GITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVV---IRDDEEVF 329 (380)
T ss_pred cEEEEechhhHHHHHHhccE--EEeCCC--chHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEE---ECCHHHHH
Confidence 55667888774 67888774 889888 78889999999 1 1 244433 24778999
Q ss_pred HHHHHHhcCC
Q 044725 83 VLVRGMMEGD 92 (121)
Q Consensus 83 ~~i~~vm~~~ 92 (121)
++|.+++.++
T Consensus 330 ~~i~~ll~~~ 339 (380)
T PRK13609 330 AKTEALLQDD 339 (380)
T ss_pred HHHHHHHCCH
Confidence 9999999875
No 38
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=92.63 E-value=0.39 Score=38.52 Aligned_cols=74 Identities=11% Similarity=0.133 Sum_probs=50.1
Q ss_pred CceEEeecchh-hhccCCCCcceeecCCCcchhHHHHHHcc--------------------cccceEEEECCcCCHHHHH
Q 044725 24 RGFLVSWSPQE-QVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------SSRGTGMEINQNVKRDEVK 82 (121)
Q Consensus 24 ~g~v~~W~pQ~-~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------~~~gvG~~l~~~~~~~~l~ 82 (121)
+..+..|.++. ++++..++ |+|..| -.++.||+..| .+.|+|+.. -+.+++.
T Consensus 257 ~v~~~G~~~~~~~~~~~aDl--~I~k~g--g~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~---~~~~~l~ 329 (391)
T PRK13608 257 NVLILGYTKHMNEWMASSQL--MITKPG--GITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA---DTPEEAI 329 (391)
T ss_pred CeEEEeccchHHHHHHhhhE--EEeCCc--hHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe---CCHHHHH
Confidence 44566777653 46677765 888776 67889999999 244555443 2788899
Q ss_pred HHHHHHhcCCC-cHHHHHHHHHH
Q 044725 83 VLVRGMMEGDK-GKPIKCMALEW 104 (121)
Q Consensus 83 ~~i~~vm~~~~-g~~~r~~a~~l 104 (121)
++|.+++.+++ -+.+++++.++
T Consensus 330 ~~i~~ll~~~~~~~~m~~~~~~~ 352 (391)
T PRK13608 330 KIVASLTNGNEQLTNMISTMEQD 352 (391)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHh
Confidence 99999997652 23455555544
No 39
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=91.11 E-value=0.59 Score=37.74 Aligned_cols=75 Identities=12% Similarity=0.150 Sum_probs=56.4
Q ss_pred eEEeecchh-hhccCCCCcceeecCCCcchhHHHHHHcc-----------------------cccceEEEECC-cCCHHH
Q 044725 26 FLVSWSPQE-QVLCHPSDVAFLTHSRWNWNSTIESLSSM-----------------------SSRGTGMEINQ-NVKRDE 80 (121)
Q Consensus 26 ~v~~W~pQ~-~iL~h~~v~~fvtH~G~~~ns~~Eal~~G-----------------------~~~gvG~~l~~-~~~~~~ 80 (121)
.+..+..+. .+++-.+ +.||..| .+.+.|.++.| ++.|.|..+.. ..+.++
T Consensus 238 ~v~~f~~dm~~~~~~AD--LvIsRaG--a~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~ 313 (357)
T COG0707 238 RVLPFIDDMAALLAAAD--LVISRAG--ALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEK 313 (357)
T ss_pred EEeeHHhhHHHHHHhcc--EEEeCCc--ccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHH
Confidence 355666653 3556555 5999999 99999999999 67789988876 789999
Q ss_pred HHHHHHHHhcCCC-cHHHHHHHHHH
Q 044725 81 VKVLVRGMMEGDK-GKPIKCMALEW 104 (121)
Q Consensus 81 l~~~i~~vm~~~~-g~~~r~~a~~l 104 (121)
+.+.|.+++.+++ -+.|+++++.+
T Consensus 314 l~~~i~~l~~~~~~l~~m~~~a~~~ 338 (357)
T COG0707 314 LAELILRLLSNPEKLKAMAENAKKL 338 (357)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 9999999998742 23455555544
No 40
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=90.77 E-value=1.7 Score=33.52 Aligned_cols=84 Identities=12% Similarity=0.188 Sum_probs=54.1
Q ss_pred HHHhhcCCceEEeecchh---hhccCCCCcceeecCCCcc-hhHHHHHHcc------cccc---------eEEEECCcCC
Q 044725 17 YCEEIRDRGFLVSWSPQE---QVLCHPSDVAFLTHSRWNW-NSTIESLSSM------SSRG---------TGMEINQNVK 77 (121)
Q Consensus 17 ~~~~~~~~g~v~~W~pQ~---~iL~h~~v~~fvtH~G~~~-ns~~Eal~~G------~~~g---------vG~~l~~~~~ 77 (121)
+.+...+++.+..++|+. .+|+...+-.+.+.-| + .+++||+.+| ..-| .|..++ .-+
T Consensus 236 l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~--~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~-~~~ 312 (351)
T cd03804 236 LRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAEED--FGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFE-EQT 312 (351)
T ss_pred HHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCC--CCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeC-CCC
Confidence 333455677788999974 4677777644444433 3 4588999999 2222 333332 246
Q ss_pred HHHHHHHHHHHhcCC--CcHHHHHHHHH
Q 044725 78 RDEVKVLVRGMMEGD--KGKPIKCMALE 103 (121)
Q Consensus 78 ~~~l~~~i~~vm~~~--~g~~~r~~a~~ 103 (121)
.+++.++|..++.++ .++.+++++++
T Consensus 313 ~~~la~~i~~l~~~~~~~~~~~~~~~~~ 340 (351)
T cd03804 313 VESLAAAVERFEKNEDFDPQAIRAHAER 340 (351)
T ss_pred HHHHHHHHHHHHhCcccCHHHHHHHHHh
Confidence 788999999999876 34566666654
No 41
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=90.75 E-value=1.4 Score=35.13 Aligned_cols=61 Identities=11% Similarity=0.034 Sum_probs=43.6
Q ss_pred CceEEeecchh-hhccCCCCcceeecCCCcchhHHHHHHcc------c--------------ccceEEEECCcCCHHHHH
Q 044725 24 RGFLVSWSPQE-QVLCHPSDVAFLTHSRWNWNSTIESLSSM------S--------------SRGTGMEINQNVKRDEVK 82 (121)
Q Consensus 24 ~g~v~~W~pQ~-~iL~h~~v~~fvtH~G~~~ns~~Eal~~G------~--------------~~gvG~~l~~~~~~~~l~ 82 (121)
+..+..|+++. ++++..++ ||+.+| -++++||+.+| . ..|.|..+ -+.+++.
T Consensus 266 ~v~~~G~~~~~~~l~~aaDv--~V~~~g--~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~---~~~~~la 338 (382)
T PLN02605 266 PVKVRGFVTNMEEWMGACDC--IITKAG--PGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFS---ESPKEIA 338 (382)
T ss_pred CeEEEeccccHHHHHHhCCE--EEECCC--cchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeec---CCHHHHH
Confidence 44566787763 45666664 888888 78899999999 1 13344322 5789999
Q ss_pred HHHHHHhcC
Q 044725 83 VLVRGMMEG 91 (121)
Q Consensus 83 ~~i~~vm~~ 91 (121)
++|.+++.+
T Consensus 339 ~~i~~ll~~ 347 (382)
T PLN02605 339 RIVAEWFGD 347 (382)
T ss_pred HHHHHHHcC
Confidence 999999986
No 42
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=90.53 E-value=0.88 Score=36.62 Aligned_cols=80 Identities=10% Similarity=0.049 Sum_probs=49.6
Q ss_pred hhhccCCCCcceeecCCCcchhHHHHHHcc--------------------------------cccceEEEEC-CcCCHHH
Q 044725 34 EQVLCHPSDVAFLTHSRWNWNSTIESLSSM--------------------------------SSRGTGMEIN-QNVKRDE 80 (121)
Q Consensus 34 ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G--------------------------------~~~gvG~~l~-~~~~~~~ 80 (121)
..+++..++ ||+-+| . +++|++..| ...++..++- ..++.+.
T Consensus 262 ~~~l~aADl--~V~~SG--t-~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~ 336 (385)
T TIGR00215 262 RKAMFAADA--ALLASG--T-AALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHP 336 (385)
T ss_pred HHHHHhCCE--EeecCC--H-HHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHH
Confidence 446666664 888888 4 566999999 2233333332 3789999
Q ss_pred HHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHhhcCCCC
Q 044725 81 VKVLVRGMMEGD-KGKPIKCMALEWKKKAEAATYIGDHL 118 (121)
Q Consensus 81 l~~~i~~vm~~~-~g~~~r~~a~~l~~~~~~a~~~gGss 118 (121)
|.+.+.+++.++ ...++++...+--..+++.+.++|.|
T Consensus 337 l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 375 (385)
T TIGR00215 337 LAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADS 375 (385)
T ss_pred HHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 999999999875 22234444444444444445555554
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=88.83 E-value=3.2 Score=31.06 Aligned_cols=68 Identities=10% Similarity=0.124 Sum_probs=45.0
Q ss_pred cCCceEEeecchhh---hccCCCCcceeecCCC--cchhHHHHHHcc---------------cccceEEEECCcCCHHHH
Q 044725 22 RDRGFLVSWSPQEQ---VLCHPSDVAFLTHSRW--NWNSTIESLSSM---------------SSRGTGMEINQNVKRDEV 81 (121)
Q Consensus 22 ~~~g~v~~W~pQ~~---iL~h~~v~~fvtH~G~--~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l 81 (121)
.++..+..|+|+.+ +++...+ |+..+.. .-++++||+.+| ...+.|..++ ..+.+++
T Consensus 246 ~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~-~~~~~~l 322 (364)
T cd03814 246 YPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVE-PGDAEAF 322 (364)
T ss_pred CCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcC-CCCHHHH
Confidence 34566778888755 6777765 4433320 126799999999 2234454443 4567789
Q ss_pred HHHHHHHhcCC
Q 044725 82 KVLVRGMMEGD 92 (121)
Q Consensus 82 ~~~i~~vm~~~ 92 (121)
.+++.+++.++
T Consensus 323 ~~~i~~l~~~~ 333 (364)
T cd03814 323 AAALAALLADP 333 (364)
T ss_pred HHHHHHHHcCH
Confidence 99999999876
No 44
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=87.81 E-value=3.4 Score=30.86 Aligned_cols=81 Identities=11% Similarity=0.129 Sum_probs=47.9
Q ss_pred CCceEEeecchhh---hccCCCCcceeecCCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTHSRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKVL 84 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~~ 84 (121)
++..+..++|+.+ ++++..+..+.+.....-.+++||+.+| ...+.|..++. -+. ++.++
T Consensus 259 ~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~-~~~-~~~~~ 336 (374)
T cd03817 259 DRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPP-GDE-ALAEA 336 (374)
T ss_pred CcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCC-CCH-HHHHH
Confidence 4556678888754 5677776443332210026799999999 22234544442 122 89999
Q ss_pred HHHHhcCCC-cHHHHHHHHHHH
Q 044725 85 VRGMMEGDK-GKPIKCMALEWK 105 (121)
Q Consensus 85 i~~vm~~~~-g~~~r~~a~~l~ 105 (121)
+..++.+++ -..+++++.+..
T Consensus 337 i~~l~~~~~~~~~~~~~~~~~~ 358 (374)
T cd03817 337 LLRLLQDPELRRRLSKNAEESA 358 (374)
T ss_pred HHHHHhChHHHHHHHHHHHHHH
Confidence 999998762 124555555443
No 45
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=87.45 E-value=3.7 Score=31.02 Aligned_cols=67 Identities=15% Similarity=0.161 Sum_probs=44.7
Q ss_pred CCceEEeecchhh---hccCCCCcceeec---CCCcc-hhHHHHHHcc---------------cc-cceEEEECCcCCHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTH---SRWNW-NSTIESLSSM---------------SS-RGTGMEINQNVKRD 79 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH---~G~~~-ns~~Eal~~G---------------~~-~gvG~~l~~~~~~~ 79 (121)
.++.+..|+|+.+ +++..++..+.++ -| + .+++||+.+| .. .+.|..++ .-+.+
T Consensus 244 ~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~--~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~-~~d~~ 320 (357)
T cd03795 244 DRVRFLGRLDDEEKAALLAACDVFVFPSVERSEA--FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVP-PGDPA 320 (357)
T ss_pred ceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccc--cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeC-CCCHH
Confidence 4666779999743 6666666555443 23 3 4699999999 11 23343332 34788
Q ss_pred HHHHHHHHHhcCC
Q 044725 80 EVKVLVRGMMEGD 92 (121)
Q Consensus 80 ~l~~~i~~vm~~~ 92 (121)
++.++|..++.++
T Consensus 321 ~~~~~i~~l~~~~ 333 (357)
T cd03795 321 ALAEAIRRLLEDP 333 (357)
T ss_pred HHHHHHHHHHHCH
Confidence 9999999999876
No 46
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=86.81 E-value=5.3 Score=30.51 Aligned_cols=68 Identities=9% Similarity=0.034 Sum_probs=42.5
Q ss_pred CCceEEeecchhh---hccCCCCcceeec-------CCCcchhHHHHHHcc------c---------ccceEEEECCcCC
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTH-------SRWNWNSTIESLSSM------S---------SRGTGMEINQNVK 77 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH-------~G~~~ns~~Eal~~G------~---------~~gvG~~l~~~~~ 77 (121)
++..+..++|+.+ +++...+..+-+. -| .-++++||+.+| + ..+.|..++ .-+
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~-~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~-~~d 322 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEG-LPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVP-EGD 322 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccC-CchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEEC-CCC
Confidence 4445567777644 4677776433221 12 026899999999 1 223444433 347
Q ss_pred HHHHHHHHHHHhcCC
Q 044725 78 RDEVKVLVRGMMEGD 92 (121)
Q Consensus 78 ~~~l~~~i~~vm~~~ 92 (121)
.+++.++|.+++.++
T Consensus 323 ~~~l~~~i~~l~~~~ 337 (367)
T cd05844 323 VAALAAALGRLLADP 337 (367)
T ss_pred HHHHHHHHHHHHcCH
Confidence 789999999999875
No 47
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=85.74 E-value=4.6 Score=31.94 Aligned_cols=80 Identities=15% Similarity=0.158 Sum_probs=47.6
Q ss_pred CCceEEeecchhh---hccCCCCcceeecCCCcchhHHHHHHcc------cccc---------eEEEECCcCCHHHHHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTHSRWNWNSTIESLSSM------SSRG---------TGMEINQNVKRDEVKVL 84 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH~G~~~ns~~Eal~~G------~~~g---------vG~~l~~~~~~~~l~~~ 84 (121)
+++.+..++|+.+ +|+..++-.+.+.-...-++++||+.+| +.-| .|..++ ..+.+++.++
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~-~~d~~~la~~ 359 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVD-FFDPDALAAA 359 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcC-CCCHHHHHHH
Confidence 3455678888754 5667776444444221124799999999 2112 233222 3478999999
Q ss_pred HHHHhcCCC-cHHHHHHHHH
Q 044725 85 VRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 85 i~~vm~~~~-g~~~r~~a~~ 103 (121)
|.+++.+++ -..+.+++.+
T Consensus 360 i~~ll~~~~~~~~l~~~ar~ 379 (396)
T cd03818 360 VIELLDDPARRARLRRAARR 379 (396)
T ss_pred HHHHHhCHHHHHHHHHHHHH
Confidence 999998752 2334444443
No 48
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=84.33 E-value=4.6 Score=32.59 Aligned_cols=77 Identities=9% Similarity=0.073 Sum_probs=47.8
Q ss_pred CCceEEeecchhh---hccCCCCcceeec-------CCCcc-hhHHHHHHcc------c---------ccceEEEECCcC
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTH-------SRWNW-NSTIESLSSM------S---------SRGTGMEINQNV 76 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH-------~G~~~-ns~~Eal~~G------~---------~~gvG~~l~~~~ 76 (121)
++..+..|+|+.+ +++..++-.+-+. -| + +.++||+.+| . .-..|..+. .-
T Consensus 279 ~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg--~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~-~~ 355 (406)
T PRK15427 279 DVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEG--IPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVP-EN 355 (406)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccC--ccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeC-CC
Confidence 4556778998754 5666666433333 24 3 5689999999 1 122344333 35
Q ss_pred CHHHHHHHHHHHhc-CCC-cHHHHHHHH
Q 044725 77 KRDEVKVLVRGMME-GDK-GKPIKCMAL 102 (121)
Q Consensus 77 ~~~~l~~~i~~vm~-~~~-g~~~r~~a~ 102 (121)
+.+++.++|.+++. +++ -+++.+++.
T Consensus 356 d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 356 DAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 78899999999998 652 233444443
No 49
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=84.14 E-value=4.7 Score=27.59 Aligned_cols=69 Identities=9% Similarity=0.163 Sum_probs=45.1
Q ss_pred cCCceEEeecch---hhhccCCCCcceeec-CCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHH
Q 044725 22 RDRGFLVSWSPQ---EQVLCHPSDVAFLTH-SRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVK 82 (121)
Q Consensus 22 ~~~g~v~~W~pQ---~~iL~h~~v~~fvtH-~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~ 82 (121)
..+..+..+.++ ..++....+..+.+. -+ .-.+++||+.+| .....|..++.. +.+++.
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~-~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~-~~~~l~ 149 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDIFVSPSRNEG-FGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPN-DIEELA 149 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSEEEE-BSSBS-S-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTT-SHHHHH
T ss_pred cccccccccccccccccccccceeccccccccc-cccccccccccccceeeccccCCceeeccccceEEeCCC-CHHHHH
Confidence 356667788873 335666554222221 11 035799999999 344467777654 899999
Q ss_pred HHHHHHhcCC
Q 044725 83 VLVRGMMEGD 92 (121)
Q Consensus 83 ~~i~~vm~~~ 92 (121)
++|..++.++
T Consensus 150 ~~i~~~l~~~ 159 (172)
T PF00534_consen 150 DAIEKLLNDP 159 (172)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHCCH
Confidence 9999999865
No 50
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=83.37 E-value=6.6 Score=29.19 Aligned_cols=78 Identities=17% Similarity=0.098 Sum_probs=47.5
Q ss_pred CCceEEeecchhh---hccCCCCcceeec-CCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTH-SRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKV 83 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH-~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~ 83 (121)
++..+..|+|+.+ +++...+-.+-++ -| .-++++||+++| .. +.|.... .+.+++.+
T Consensus 262 ~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~-~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~ 337 (375)
T cd03821 262 DRVTFTGMLYGEDKAAALADADLFVLPSHSEN-FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVD--DDVDALAA 337 (375)
T ss_pred ceEEEcCCCChHHHHHHHhhCCEEEeccccCC-CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeC--CChHHHHH
Confidence 4455668888544 4677666444443 22 126799999999 12 4444433 34489999
Q ss_pred HHHHHhcCCC-cHHHHHHHHHH
Q 044725 84 LVRGMMEGDK-GKPIKCMALEW 104 (121)
Q Consensus 84 ~i~~vm~~~~-g~~~r~~a~~l 104 (121)
+|.+++.+++ -+.+.+++.+.
T Consensus 338 ~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 338 ALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred HHHHHHhCHHHHHHHHHHHHHH
Confidence 9999998752 23444554444
No 51
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=83.32 E-value=7.4 Score=29.42 Aligned_cols=68 Identities=13% Similarity=0.024 Sum_probs=41.4
Q ss_pred cCCceEEeecc-hh---hhccCCCCcceeecCCC--cchhHHHHHHcc------ccc---------ceEEEECCcCCHHH
Q 044725 22 RDRGFLVSWSP-QE---QVLCHPSDVAFLTHSRW--NWNSTIESLSSM------SSR---------GTGMEINQNVKRDE 80 (121)
Q Consensus 22 ~~~g~v~~W~p-Q~---~iL~h~~v~~fvtH~G~--~~ns~~Eal~~G------~~~---------gvG~~l~~~~~~~~ 80 (121)
..+.....|++ +. .+++...+ ++..+.. .-.+++||+.+| +.- ..|..++ ..+.++
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~-~~~~~~ 319 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAK-PGDPED 319 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeC-CCCHHH
Confidence 34455667887 43 35666665 4433210 026899999999 111 1233222 347889
Q ss_pred HHHHHHHHhcCC
Q 044725 81 VKVLVRGMMEGD 92 (121)
Q Consensus 81 l~~~i~~vm~~~ 92 (121)
+.+++.+++.++
T Consensus 320 ~~~~l~~l~~~~ 331 (365)
T cd03825 320 LAEGIEWLLADP 331 (365)
T ss_pred HHHHHHHHHhCH
Confidence 999999999866
No 52
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=83.29 E-value=6.6 Score=29.23 Aligned_cols=77 Identities=9% Similarity=0.085 Sum_probs=48.0
Q ss_pred CCceEEeecchhh---hccCCCCcceeec--CCCcc-hhHHHHHHcc---------------cccceEEEECCcCCHHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTH--SRWNW-NSTIESLSSM---------------SSRGTGMEINQNVKRDEV 81 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH--~G~~~-ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l 81 (121)
.+..+..|+|+.+ +++...+..+-++ .| + .+++||+.+| .....|..+. .-+.+++
T Consensus 243 ~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~--~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~-~~d~~~l 319 (359)
T cd03823 243 PRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPEN--FPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFP-PGDAEDL 319 (359)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCC--CChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEEC-CCCHHHH
Confidence 4556678887654 4677766443332 33 3 4699999999 2222455544 3468999
Q ss_pred HHHHHHHhcCCC-cHHHHHHHH
Q 044725 82 KVLVRGMMEGDK-GKPIKCMAL 102 (121)
Q Consensus 82 ~~~i~~vm~~~~-g~~~r~~a~ 102 (121)
.+++.+++.+++ -+.+++++.
T Consensus 320 ~~~i~~l~~~~~~~~~~~~~~~ 341 (359)
T cd03823 320 AAALERLIDDPDLLERLRAGIE 341 (359)
T ss_pred HHHHHHHHhChHHHHHHHHhHH
Confidence 999999998652 233444443
No 53
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=83.19 E-value=2.5 Score=33.08 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=35.5
Q ss_pred hhhccCCCCcceeecCCCcchhHHHHHHcc------------------c--ccceEE------------EE-CCcCCHHH
Q 044725 34 EQVLCHPSDVAFLTHSRWNWNSTIESLSSM------------------S--SRGTGM------------EI-NQNVKRDE 80 (121)
Q Consensus 34 ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G------------------~--~~gvG~------------~l-~~~~~~~~ 80 (121)
..+++..++ |++-+| . +++|++..| . ..+++. .+ ....+.++
T Consensus 256 ~~~~~~aDl--~v~~sG--~-~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (380)
T PRK00025 256 REAMAAADA--ALAASG--T-VTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEK 330 (380)
T ss_pred HHHHHhCCE--EEECcc--H-HHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHH
Confidence 345666664 788788 4 556999999 0 111211 11 12567899
Q ss_pred HHHHHHHHhcCC
Q 044725 81 VKVLVRGMMEGD 92 (121)
Q Consensus 81 l~~~i~~vm~~~ 92 (121)
+.+.+.+++.++
T Consensus 331 l~~~i~~ll~~~ 342 (380)
T PRK00025 331 LARALLPLLADG 342 (380)
T ss_pred HHHHHHHHhcCH
Confidence 999999999887
No 54
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=81.74 E-value=10 Score=28.20 Aligned_cols=69 Identities=10% Similarity=0.140 Sum_probs=42.4
Q ss_pred CCceEEeecchhh---hccCCCCcceeecCCC-----cchhHHHHHHcc---------------cccceEEEECCcCCHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTHSRW-----NWNSTIESLSSM---------------SSRGTGMEINQNVKRD 79 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH~G~-----~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~ 79 (121)
.+..+..|+|+.+ +++...+..+.+..+- .-+.++||+.+| ...+.|..+. .-+.+
T Consensus 275 ~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~-~~~~~ 353 (394)
T cd03794 275 DNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVP-PGDPE 353 (394)
T ss_pred CcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeC-CCCHH
Confidence 3555667887654 5666666443333210 013479999999 1223444443 23789
Q ss_pred HHHHHHHHHhcCC
Q 044725 80 EVKVLVRGMMEGD 92 (121)
Q Consensus 80 ~l~~~i~~vm~~~ 92 (121)
++.++|.+++.++
T Consensus 354 ~l~~~i~~~~~~~ 366 (394)
T cd03794 354 ALAAAILELLDDP 366 (394)
T ss_pred HHHHHHHHHHhCh
Confidence 9999999999765
No 55
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=81.73 E-value=6.6 Score=30.24 Aligned_cols=68 Identities=10% Similarity=0.067 Sum_probs=43.8
Q ss_pred CCceEEeecchhh---hccCCCCcceeecC-CCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTHS-RWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKV 83 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH~-G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~ 83 (121)
.+..+..|+|+.+ +++...+-++-++- | .-.+++||+.+| ...+.|..++ ..+.+++.+
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~-~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~-~~~~~~l~~ 360 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADVFVNPALYEP-FGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVD-PRDPEALAA 360 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCEEEecccccc-cCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeC-CCCHHHHHH
Confidence 3455678888755 46776653322221 2 025799999999 2233455543 346899999
Q ss_pred HHHHHhcCC
Q 044725 84 LVRGMMEGD 92 (121)
Q Consensus 84 ~i~~vm~~~ 92 (121)
+|.+++.++
T Consensus 361 ~i~~l~~~~ 369 (398)
T cd03800 361 ALRRLLTDP 369 (398)
T ss_pred HHHHHHhCH
Confidence 999999765
No 56
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=81.67 E-value=7.9 Score=29.15 Aligned_cols=68 Identities=13% Similarity=0.121 Sum_probs=42.8
Q ss_pred CCceEEeecchhh---hccCCCCcceeecC-------CCcchhHHHHHHcc------c---------ccceEEEECCcCC
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTHS-------RWNWNSTIESLSSM------S---------SRGTGMEINQNVK 77 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH~-------G~~~ns~~Eal~~G------~---------~~gvG~~l~~~~~ 77 (121)
++..+..|+|+.+ ++++..+..+.+.. | .-++++||+.+| . ....|..+. .-+
T Consensus 236 ~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~-~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~-~~~ 313 (355)
T cd03799 236 DRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREG-LPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVP-PGD 313 (355)
T ss_pred CeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccC-ccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeC-CCC
Confidence 4556678887543 56667664443332 2 026799999999 1 111333332 237
Q ss_pred HHHHHHHHHHHhcCC
Q 044725 78 RDEVKVLVRGMMEGD 92 (121)
Q Consensus 78 ~~~l~~~i~~vm~~~ 92 (121)
.+++.++|..++.++
T Consensus 314 ~~~l~~~i~~~~~~~ 328 (355)
T cd03799 314 PEALADAIERLLDDP 328 (355)
T ss_pred HHHHHHHHHHHHhCH
Confidence 899999999999876
No 57
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=79.93 E-value=19 Score=26.30 Aligned_cols=69 Identities=10% Similarity=0.155 Sum_probs=43.1
Q ss_pred cCCceEEeecchhh---hccCCCCcceeec-CCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHH
Q 044725 22 RDRGFLVSWSPQEQ---VLCHPSDVAFLTH-SRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVK 82 (121)
Q Consensus 22 ~~~g~v~~W~pQ~~---iL~h~~v~~fvtH-~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~ 82 (121)
.++..+..++|+.+ ++....+..+.+. .| .-++++||+.+| ...+.|..++ ..+.+++.
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~-~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~-~~~~~~l~ 332 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAADVFVLPSLYEG-FGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVP-PGDPEALA 332 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcCEEEecchhcc-ccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeC-CCCHHHHH
Confidence 34566778887543 5666665333332 12 035799999999 1123344333 34589999
Q ss_pred HHHHHHhcCC
Q 044725 83 VLVRGMMEGD 92 (121)
Q Consensus 83 ~~i~~vm~~~ 92 (121)
+++.+++.++
T Consensus 333 ~~i~~~~~~~ 342 (374)
T cd03801 333 EAILRLLDDP 342 (374)
T ss_pred HHHHHHHcCh
Confidence 9999999876
No 58
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=79.57 E-value=14 Score=27.21 Aligned_cols=68 Identities=9% Similarity=0.087 Sum_probs=43.6
Q ss_pred CCceEEeecchh---hhccCCCCcceeec-CCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHH
Q 044725 23 DRGFLVSWSPQE---QVLCHPSDVAFLTH-SRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKV 83 (121)
Q Consensus 23 ~~g~v~~W~pQ~---~iL~h~~v~~fvtH-~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~ 83 (121)
.+..+..++|+. .++...++..+.+. .| .-++++||+.+| .....|..++ .-+.+++.+
T Consensus 259 ~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~-~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~-~~~~~~l~~ 336 (377)
T cd03798 259 DRVTFLGAVPHEEVPAYYAAADVFVLPSLREG-FGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVP-PGDPEALAE 336 (377)
T ss_pred ceEEEeCCCCHHHHHHHHHhcCeeecchhhcc-CChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEEC-CCCHHHHHH
Confidence 455667888864 35666665433332 22 035799999999 2233344443 457889999
Q ss_pred HHHHHhcCC
Q 044725 84 LVRGMMEGD 92 (121)
Q Consensus 84 ~i~~vm~~~ 92 (121)
++.+++.++
T Consensus 337 ~i~~~~~~~ 345 (377)
T cd03798 337 AILRLLADP 345 (377)
T ss_pred HHHHHhcCc
Confidence 999999876
No 59
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=78.86 E-value=13 Score=28.88 Aligned_cols=79 Identities=8% Similarity=0.070 Sum_probs=47.1
Q ss_pred CCceEEeecchh---hhccCCCCcceeecCCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHHH
Q 044725 23 DRGFLVSWSPQE---QVLCHPSDVAFLTHSRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKVL 84 (121)
Q Consensus 23 ~~g~v~~W~pQ~---~iL~h~~v~~fvtH~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~~ 84 (121)
++..+..++|+. .+|....+-.+-++.--.-.+++||+.+| .....|..+. .+.+++.++
T Consensus 280 ~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~--~~~~~~a~~ 357 (392)
T cd03805 280 DQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCE--PTPEEFAEA 357 (392)
T ss_pred ceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeC--CCHHHHHHH
Confidence 455677888875 45676665332222110014689999999 1222344432 378999999
Q ss_pred HHHHhcCCC-cHHHHHHHHH
Q 044725 85 VRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 85 i~~vm~~~~-g~~~r~~a~~ 103 (121)
|.+++.+++ ...+++++.+
T Consensus 358 i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 358 MLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred HHHHHhChHHHHHHHHHHHH
Confidence 999998762 2345555544
No 60
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=78.39 E-value=14 Score=29.28 Aligned_cols=76 Identities=8% Similarity=0.083 Sum_probs=45.8
Q ss_pred CceEEeecch-hhhccCCCCcceeec--CCCcc-hhHHHHHHcc------c--------ccceEEEECCcCCHHHHHHHH
Q 044725 24 RGFLVSWSPQ-EQVLCHPSDVAFLTH--SRWNW-NSTIESLSSM------S--------SRGTGMEINQNVKRDEVKVLV 85 (121)
Q Consensus 24 ~g~v~~W~pQ-~~iL~h~~v~~fvtH--~G~~~-ns~~Eal~~G------~--------~~gvG~~l~~~~~~~~l~~~i 85 (121)
++.+..++|+ ...+++.++-.+-++ .| . +.++||+.+| . ..+.|..+ ..+.+++.++|
T Consensus 281 ~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG--~~~~~lEAma~G~PVV~t~~~~~~i~~~~~~g~lv--~~~~~~la~ai 356 (397)
T TIGR03087 281 GVTVTGSVADVRPYLAHAAVAVAPLRIARG--IQNKVLEAMAMAKPVVASPEAAEGIDALPGAELLV--AADPADFAAAI 356 (397)
T ss_pred CeEEeeecCCHHHHHHhCCEEEecccccCC--cccHHHHHHHcCCCEEecCcccccccccCCcceEe--CCCHHHHHHHH
Confidence 4456677775 345677666443332 35 4 4699999999 1 11223332 25789999999
Q ss_pred HHHhcCCC-cHHHHHHHHH
Q 044725 86 RGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 86 ~~vm~~~~-g~~~r~~a~~ 103 (121)
.+++.+++ .+.+.+++.+
T Consensus 357 ~~ll~~~~~~~~~~~~ar~ 375 (397)
T TIGR03087 357 LALLANPAEREELGQAARR 375 (397)
T ss_pred HHHHcCHHHHHHHHHHHHH
Confidence 99998752 2344444443
No 61
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=78.17 E-value=8.8 Score=29.68 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=46.7
Q ss_pred ceEEeecch-hhhccCCCCcceeecC-CCcchhHHHHHHcc-----ccc--c---------eEEEECCcCCHHHHHHHHH
Q 044725 25 GFLVSWSPQ-EQVLCHPSDVAFLTHS-RWNWNSTIESLSSM-----SSR--G---------TGMEINQNVKRDEVKVLVR 86 (121)
Q Consensus 25 g~v~~W~pQ-~~iL~h~~v~~fvtH~-G~~~ns~~Eal~~G-----~~~--g---------vG~~l~~~~~~~~l~~~i~ 86 (121)
..+..+.++ ..+++...+-.+.++. | .-.+++||+.+| -.. | .|..++ .-+.+++.++|.
T Consensus 263 v~~~g~~~~~~~~~~~ad~~v~~S~~Eg-~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~-~~d~~~la~~i~ 340 (372)
T cd04949 263 VFLKGYTRDLDEVYQKAQLSLLTSQSEG-FGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVP-KGDIEALAEAII 340 (372)
T ss_pred EEEcCCCCCHHHHHhhhhEEEecccccc-cChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeC-CCcHHHHHHHHH
Confidence 334444443 3456777765555653 2 136799999999 111 2 122221 247889999999
Q ss_pred HHhcCCC-cHHHHHHHHHHHH
Q 044725 87 GMMEGDK-GKPIKCMALEWKK 106 (121)
Q Consensus 87 ~vm~~~~-g~~~r~~a~~l~~ 106 (121)
.++.+++ -..+.+++.+..+
T Consensus 341 ~ll~~~~~~~~~~~~a~~~~~ 361 (372)
T cd04949 341 ELLNDPKLLQKFSEAAYENAE 361 (372)
T ss_pred HHHcCHHHHHHHHHHHHHHHH
Confidence 9998762 2355555555433
No 62
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=77.16 E-value=22 Score=27.73 Aligned_cols=52 Identities=15% Similarity=0.132 Sum_probs=35.5
Q ss_pred hhHHHHHHcc------c-ccc---------eEEEECCcCCHHHHHHHHHHHhcCCC---cHHHHHHHHHHHH
Q 044725 54 NSTIESLSSM------S-SRG---------TGMEINQNVKRDEVKVLVRGMMEGDK---GKPIKCMALEWKK 106 (121)
Q Consensus 54 ns~~Eal~~G------~-~~g---------vG~~l~~~~~~~~l~~~i~~vm~~~~---g~~~r~~a~~l~~ 106 (121)
.+++||+.+| + .-| .|..+. .-+.+++.++|..++.+++ ...+++++.++..
T Consensus 272 ~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~-~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 272 MTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYT-PGNIDEFVGKLNKVISGEVKYQHDAIPNSIERFYE 342 (359)
T ss_pred hHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEEC-CCCHHHHHHHHHHHHhCcccCCHHHHHHHHHHhhH
Confidence 6899999999 2 222 233332 3588999999999998875 3456666666554
No 63
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=75.46 E-value=16 Score=26.66 Aligned_cols=49 Identities=18% Similarity=0.240 Sum_probs=31.3
Q ss_pred hhHHHHHHcc------c---------ccc-eEEEECCcCCHHHHHHHHHHHhcCCC-cHHHHHHHHH
Q 044725 54 NSTIESLSSM------S---------SRG-TGMEINQNVKRDEVKVLVRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 54 ns~~Eal~~G------~---------~~g-vG~~l~~~~~~~~l~~~i~~vm~~~~-g~~~r~~a~~ 103 (121)
++++||+.+| + ..+ .|..++ ..+.+++.++|.+++.+++ -..+++++.+
T Consensus 267 ~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~ 332 (348)
T cd03820 267 MVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVP-NGDVEALAEALLRLMEDEELRKRMGANARE 332 (348)
T ss_pred HHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeC-CCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 5799999999 1 111 344333 3567899999999998762 1234444433
No 64
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=74.53 E-value=7.4 Score=31.36 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=45.2
Q ss_pred eecchhh---hccCCCCcceeec----CCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHHHHH
Q 044725 29 SWSPQEQ---VLCHPSDVAFLTH----SRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKVLVR 86 (121)
Q Consensus 29 ~W~pQ~~---iL~h~~v~~fvtH----~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~~i~ 86 (121)
.|+|..+ +|+...+...... -| .=+.++||+.+| ++-..|..+. +.+++.++|.
T Consensus 301 g~~~~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~---d~~~la~~i~ 376 (415)
T cd03816 301 PWLSAEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG---DSEELAEQLI 376 (415)
T ss_pred CcCCHHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC---CHHHHHHHHH
Confidence 5777544 4667776332111 12 024699999999 2333455552 7899999999
Q ss_pred HHhcC---C-CcHHHHHHHHHHH
Q 044725 87 GMMEG---D-KGKPIKCMALEWK 105 (121)
Q Consensus 87 ~vm~~---~-~g~~~r~~a~~l~ 105 (121)
.++.+ + +-..|++++++.+
T Consensus 377 ~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 377 DLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhh
Confidence 99987 4 2355666666544
No 65
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=73.72 E-value=3.6 Score=32.24 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=38.4
Q ss_pred CceEEeecch---hhhccCCCCcceeecCCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHHHH
Q 044725 24 RGFLVSWSPQ---EQVLCHPSDVAFLTHSRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKVLV 85 (121)
Q Consensus 24 ~g~v~~W~pQ---~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~~i 85 (121)
+..+..-++. ..++++..+ |++-+| ..++||+..| ...|.+..+ ..+.++|.+++
T Consensus 256 ~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg---~~~~EA~a~g~PvI~~~~~~~~~e~~~~g~~~lv--~~d~~~i~~ai 328 (365)
T TIGR00236 256 RVHLIEPLEYLDFLNLAANSHL--ILTDSG---GVQEEAPSLGKPVLVLRDTTERPETVEAGTNKLV--GTDKENITKAA 328 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCE--EEECCh---hHHHHHHHcCCCEEECCCCCCChHHHhcCceEEe--CCCHHHHHHHH
Confidence 4444443343 345566654 777666 3479999998 011223222 24789999999
Q ss_pred HHHhcCC
Q 044725 86 RGMMEGD 92 (121)
Q Consensus 86 ~~vm~~~ 92 (121)
.+++.++
T Consensus 329 ~~ll~~~ 335 (365)
T TIGR00236 329 KRLLTDP 335 (365)
T ss_pred HHHHhCh
Confidence 9999765
No 66
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=72.14 E-value=23 Score=26.15 Aligned_cols=56 Identities=11% Similarity=0.090 Sum_probs=33.3
Q ss_pred hhccCCCCcceeecC-CCcchhHHHHHHcc------cccc-------eEEEECCcCCHHHHHHHHHHHhcCC
Q 044725 35 QVLCHPSDVAFLTHS-RWNWNSTIESLSSM------SSRG-------TGMEINQNVKRDEVKVLVRGMMEGD 92 (121)
Q Consensus 35 ~iL~h~~v~~fvtH~-G~~~ns~~Eal~~G------~~~g-------vG~~l~~~~~~~~l~~~i~~vm~~~ 92 (121)
.+++...+..+-++. | .-++++||+.+| +.-+ .|..+. .-+.+++.+++..++.++
T Consensus 264 ~~~~~adi~v~ps~~e~-~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~~g~~~~-~~~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 264 ALLNALDVFVLSSLSEG-FPNVLLEAMACGLPVVATDVGDNAELVGDTGFLVP-PGDPEALAEAIEALLADP 333 (365)
T ss_pred HHHHhCCEEEeCCcccc-CCcHHHHHHhcCCCEEEcCCCChHHHhhcCCEEeC-CCCHHHHHHHHHHHHhCh
Confidence 455666653322221 1 026899999999 1111 233332 246889999999999875
No 67
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=72.06 E-value=24 Score=27.64 Aligned_cols=79 Identities=15% Similarity=0.128 Sum_probs=45.9
Q ss_pred CCceEEeecchh---hhccCCCCcceeec-CCCcchhHHHHHHcc------c---------ccceEEEECCcCCHHHHHH
Q 044725 23 DRGFLVSWSPQE---QVLCHPSDVAFLTH-SRWNWNSTIESLSSM------S---------SRGTGMEINQNVKRDEVKV 83 (121)
Q Consensus 23 ~~g~v~~W~pQ~---~iL~h~~v~~fvtH-~G~~~ns~~Eal~~G------~---------~~gvG~~l~~~~~~~~l~~ 83 (121)
++..+..++|.. ++|+...+..+-+. -| .-.+++||+.+| . ....|..++ .-+.+++.+
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~-~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~-~~d~~~la~ 360 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADVVAVPSYNES-FGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVD-GHDPADWAD 360 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCEEEECCCCCC-cChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECC-CCCHHHHHH
Confidence 345566777754 45777765333222 22 025799999999 1 122333332 247889999
Q ss_pred HHHHHhcCCC-cHHHHHHHHH
Q 044725 84 LVRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 84 ~i~~vm~~~~-g~~~r~~a~~ 103 (121)
+|.+++.+++ ...+++++.+
T Consensus 361 ~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 361 ALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred HHHHHHhCHHHHHHHHHHHHH
Confidence 9999997652 2344444443
No 68
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=70.66 E-value=9.1 Score=25.07 Aligned_cols=68 Identities=10% Similarity=0.132 Sum_probs=39.0
Q ss_pred cCCceEEeecch-hhhccCCCCcceeecCCC-cchhHHHHHHcc--------------cccceEEEECCcCCHHHHHHHH
Q 044725 22 RDRGFLVSWSPQ-EQVLCHPSDVAFLTHSRW-NWNSTIESLSSM--------------SSRGTGMEINQNVKRDEVKVLV 85 (121)
Q Consensus 22 ~~~g~v~~W~pQ-~~iL~h~~v~~fvtH~G~-~~ns~~Eal~~G--------------~~~gvG~~l~~~~~~~~l~~~i 85 (121)
..+..+..|+|+ .++++...+..+.+..+. .-+.++|++.+| +..+.|..+ .-+.+++.+++
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~i 129 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNGAEGIVEEDGCGVLV--ANDPEELAEAI 129 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHHCHCHS---SEEEE---TT-HHHHHHHH
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcchhhheeecCCeEEE--CCCHHHHHHHH
Confidence 446667777764 346777777766553210 136799999999 223455544 45889999999
Q ss_pred HHHhcC
Q 044725 86 RGMMEG 91 (121)
Q Consensus 86 ~~vm~~ 91 (121)
++++.|
T Consensus 130 ~~l~~d 135 (135)
T PF13692_consen 130 ERLLND 135 (135)
T ss_dssp HHHHH-
T ss_pred HHHhcC
Confidence 988753
No 69
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=68.74 E-value=28 Score=26.00 Aligned_cols=78 Identities=13% Similarity=0.215 Sum_probs=42.5
Q ss_pred CceEE-eecchh---hhccCCCCcceeec-C--CCcchhHHHHHHcc------ccc--------ceEEEECCcCCHHHHH
Q 044725 24 RGFLV-SWSPQE---QVLCHPSDVAFLTH-S--RWNWNSTIESLSSM------SSR--------GTGMEINQNVKRDEVK 82 (121)
Q Consensus 24 ~g~v~-~W~pQ~---~iL~h~~v~~fvtH-~--G~~~ns~~Eal~~G------~~~--------gvG~~l~~~~~~~~l~ 82 (121)
+..+. .|+|+. .+++...+..+-+. . | .-++++||+.+| +.- +.|..+. .-+.+++.
T Consensus 248 ~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~-~~~~~~Ea~a~G~PvI~~~~~~~~~i~~~~~g~~~~-~~d~~~~~ 325 (366)
T cd03822 248 RVIFINRYLPDEELPELFSAADVVVLPYRSADQT-QSGVLAYAIGFGKPVISTPVGHAEEVLDGGTGLLVP-PGDPAALA 325 (366)
T ss_pred cEEEecCcCCHHHHHHHHhhcCEEEecccccccc-cchHHHHHHHcCCCEEecCCCChheeeeCCCcEEEc-CCCHHHHH
Confidence 34444 457764 35566655333222 1 3 024688999999 211 1222221 24688999
Q ss_pred HHHHHHhcCCC-cHHHHHHHHH
Q 044725 83 VLVRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 83 ~~i~~vm~~~~-g~~~r~~a~~ 103 (121)
+++..++.+++ -.++++++.+
T Consensus 326 ~~l~~l~~~~~~~~~~~~~~~~ 347 (366)
T cd03822 326 EAIRRLLADPELAQALRARARE 347 (366)
T ss_pred HHHHHHHcChHHHHHHHHHHHH
Confidence 99999998742 2334444443
No 70
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=68.50 E-value=23 Score=26.40 Aligned_cols=70 Identities=9% Similarity=0.104 Sum_probs=41.3
Q ss_pred cCCceEEeecchhh---hccCCCCcceeecC-CCcchhHHHHHHcc------cccceEEEEC------CcCCHHHHHHHH
Q 044725 22 RDRGFLVSWSPQEQ---VLCHPSDVAFLTHS-RWNWNSTIESLSSM------SSRGTGMEIN------QNVKRDEVKVLV 85 (121)
Q Consensus 22 ~~~g~v~~W~pQ~~---iL~h~~v~~fvtH~-G~~~ns~~Eal~~G------~~~gvG~~l~------~~~~~~~l~~~i 85 (121)
.++..+..|+|+.+ +|+...+..+-+.. | .-.+++||+.+| +.-++...+. ..-+.+++.+++
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~-~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i 330 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARAFVFPSLYEG-FGLPVLEAMACGTPVIASNISSLPEVAGDAALYFDPLDPEALAAAI 330 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhhhcccchhcc-CCCCHHHHhcCCCcEEecCCCCccceecCceeeeCCCCHHHHHHHH
Confidence 34555668887753 56666653333221 1 025799999999 1112221111 134788999999
Q ss_pred HHHhcCC
Q 044725 86 RGMMEGD 92 (121)
Q Consensus 86 ~~vm~~~ 92 (121)
..++.++
T Consensus 331 ~~l~~~~ 337 (365)
T cd03809 331 ERLLEDP 337 (365)
T ss_pred HHHhcCH
Confidence 9988766
No 71
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=66.95 E-value=11 Score=29.42 Aligned_cols=51 Identities=10% Similarity=0.106 Sum_probs=36.8
Q ss_pred HHHHHHcc---------------cccceEEEECCcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Q 044725 56 TIESLSSM---------------SSRGTGMEINQNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEA 110 (121)
Q Consensus 56 ~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~ 110 (121)
+.+.+.+| ++.+.|..++ +.+++.+++..+. .++-..|++|++++++.++.
T Consensus 253 ~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v~---~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 253 LSLYLAAGLPVIVWSKAAIADFIVENGLGFVVD---SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred HHHHHHCCCCEEECCCccHHHHHHhCCceEEeC---CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc
Confidence 56677787 4556777765 5678988888854 34445789999999888763
No 72
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=64.32 E-value=45 Score=24.40 Aligned_cols=56 Identities=7% Similarity=0.056 Sum_probs=34.1
Q ss_pred hhccCCCCcceeec-CCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHHHHHHHhcCC
Q 044725 35 QVLCHPSDVAFLTH-SRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKVLVRGMMEGD 92 (121)
Q Consensus 35 ~iL~h~~v~~fvtH-~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~~i~~vm~~~ 92 (121)
.+++..++-.+-+. .| .-++++||+.+| ...+.|..++ .-+.+++.+++.+++.++
T Consensus 259 ~~~~~adi~i~ps~~e~-~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~-~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 259 ELLAAADVFVLPSYREG-LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVP-PGDAEALADAIERLIEDP 330 (359)
T ss_pred HHHHhccEEEecCcccC-cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEEC-CCCHHHHHHHHHHHHhCH
Confidence 35565555333222 12 126799999999 1223344433 346889999999988776
No 73
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=61.64 E-value=53 Score=26.77 Aligned_cols=66 Identities=11% Similarity=0.057 Sum_probs=40.8
Q ss_pred CceEEeecchhh---hccCCCCcceeecCCC--cchhHHHHHHcc---------------cc---cceEEEECCcCCHHH
Q 044725 24 RGFLVSWSPQEQ---VLCHPSDVAFLTHSRW--NWNSTIESLSSM---------------SS---RGTGMEINQNVKRDE 80 (121)
Q Consensus 24 ~g~v~~W~pQ~~---iL~h~~v~~fvtH~G~--~~ns~~Eal~~G---------------~~---~gvG~~l~~~~~~~~ 80 (121)
+..+..++|+.+ +++..++ |+.-... .-+.++||+.+| .. -+.|..+. .-+.++
T Consensus 313 ~V~f~G~v~~~ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~-~~d~~~ 389 (465)
T PLN02871 313 PTVFTGMLQGDELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYT-PGDVDD 389 (465)
T ss_pred CeEEeccCCHHHHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeC-CCCHHH
Confidence 344557776543 5666665 4432220 124699999999 12 33454443 347889
Q ss_pred HHHHHHHHhcCC
Q 044725 81 VKVLVRGMMEGD 92 (121)
Q Consensus 81 l~~~i~~vm~~~ 92 (121)
+.++|.++++++
T Consensus 390 la~~i~~ll~~~ 401 (465)
T PLN02871 390 CVEKLETLLADP 401 (465)
T ss_pred HHHHHHHHHhCH
Confidence 999999999865
No 74
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=60.01 E-value=50 Score=25.47 Aligned_cols=57 Identities=9% Similarity=-0.002 Sum_probs=35.0
Q ss_pred hhccCCCCcceeecCCCcchhHHHHHHcc------c---------ccceEEEECCcCCHHHHHHHHHHHhcCC
Q 044725 35 QVLCHPSDVAFLTHSRWNWNSTIESLSSM------S---------SRGTGMEINQNVKRDEVKVLVRGMMEGD 92 (121)
Q Consensus 35 ~iL~h~~v~~fvtH~G~~~ns~~Eal~~G------~---------~~gvG~~l~~~~~~~~l~~~i~~vm~~~ 92 (121)
.+++..++-.+.++..-.-++++||+.+| + .-..|..++ .-+.+++.+++..++.++
T Consensus 268 ~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~-~~d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 268 ALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVP-PGDAVALARALQPYVSDP 339 (374)
T ss_pred HHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeC-CCCHHHHHHHHHHHHhCH
Confidence 45666665333333110136899999999 1 122344333 357889999999999765
No 75
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=59.01 E-value=72 Score=25.79 Aligned_cols=65 Identities=20% Similarity=0.172 Sum_probs=41.2
Q ss_pred cCCceEEeecchhh---hccCCCCcceee---cCCCcchhHHHHHHcc------cccc-------------eEEEECCcC
Q 044725 22 RDRGFLVSWSPQEQ---VLCHPSDVAFLT---HSRWNWNSTIESLSSM------SSRG-------------TGMEINQNV 76 (121)
Q Consensus 22 ~~~g~v~~W~pQ~~---iL~h~~v~~fvt---H~G~~~ns~~Eal~~G------~~~g-------------vG~~l~~~~ 76 (121)
.+++.+..++|+.+ +|+...+..+.+ |-| .+++||+.+| ..-| .|... -
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fg---i~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~---~ 377 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFG---IGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA---S 377 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcc---cHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe---C
Confidence 34566667787644 566666533221 333 4789999999 1112 23322 3
Q ss_pred CHHHHHHHHHHHhcCC
Q 044725 77 KRDEVKVLVRGMMEGD 92 (121)
Q Consensus 77 ~~~~l~~~i~~vm~~~ 92 (121)
+.+++.++|.+++.++
T Consensus 378 d~~~la~ai~~ll~~~ 393 (419)
T cd03806 378 TAEEYAEAIEKILSLS 393 (419)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 8899999999999865
No 76
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=58.62 E-value=49 Score=26.11 Aligned_cols=67 Identities=15% Similarity=0.097 Sum_probs=40.1
Q ss_pred CCceEEeecchhh---hccCCCCcceeecC-CCcc-hhHHHHHHcc------cccceEEEECC------cCCHHHHHHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTHS-RWNW-NSTIESLSSM------SSRGTGMEINQ------NVKRDEVKVLV 85 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH~-G~~~-ns~~Eal~~G------~~~gvG~~l~~------~~~~~~l~~~i 85 (121)
++..+..|+|+.+ +|+..++..+-+.. | + .+++||+.+| +.-|+...+.. ..+.+++.+++
T Consensus 250 ~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~--~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~~~~~~~~l~~~l 327 (398)
T cd03796 250 DRVELLGAVPHERVRDVLVQGHIFLNTSLTEA--FCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILLAEPDVESIVRKL 327 (398)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCEEEeCChhhc--cCHHHHHHHHcCCCEEECCCCCchhheeCCceeecCCCHHHHHHHH
Confidence 4455678887644 56666653333322 2 2 4899999999 11122111111 23778999999
Q ss_pred HHHhcC
Q 044725 86 RGMMEG 91 (121)
Q Consensus 86 ~~vm~~ 91 (121)
.+++.+
T Consensus 328 ~~~l~~ 333 (398)
T cd03796 328 EEAISI 333 (398)
T ss_pred HHHHhC
Confidence 999875
No 77
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=57.67 E-value=71 Score=23.18 Aligned_cols=39 Identities=10% Similarity=0.020 Sum_probs=22.6
Q ss_pred CceEEeecch-hhhccCCCCcceeecC-CCcchhHHHHHHcc
Q 044725 24 RGFLVSWSPQ-EQVLCHPSDVAFLTHS-RWNWNSTIESLSSM 63 (121)
Q Consensus 24 ~g~v~~W~pQ-~~iL~h~~v~~fvtH~-G~~~ns~~Eal~~G 63 (121)
+..+..|.++ ..+++...+..+.++. | .-++++||+.+|
T Consensus 247 ~v~~~g~~~~~~~~~~~~d~~i~ps~~e~-~~~~~~Ea~~~G 287 (353)
T cd03811 247 RVHFLGFQSNPYPYLKAADLFVLSSRYEG-FPNVLLEAMALG 287 (353)
T ss_pred cEEEecccCCHHHHHHhCCEEEeCcccCC-CCcHHHHHHHhC
Confidence 3445566554 3466666654444332 2 025799999999
No 78
>COG4844 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.26 E-value=3.2 Score=26.05 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=26.0
Q ss_pred chhhhccCCCCcceeecCCCcchhHHHHHHcccccceEEEECCcCCHHHHHHHHHHHh
Q 044725 32 PQEQVLCHPSDVAFLTHSRWNWNSTIESLSSMSSRGTGMEINQNVKRDEVKVLVRGMM 89 (121)
Q Consensus 32 pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G~~~gvG~~l~~~~~~~~l~~~i~~vm 89 (121)
|..+||.- ..+||||+|.+|.. |+-.| ..+. .-+++++.+.|-..+
T Consensus 27 p~lDvlEY----gCLt~Cg~Ca~~lf-ALVnG------evV~-Get~eeLv~NIY~~i 72 (78)
T COG4844 27 PNLDVLEY----GCLTHCGICAASLF-ALVNG------EVVE-GETPEELVENIYTFI 72 (78)
T ss_pred CCccchhh----hhHhhhhhHHHhHH-HHhcC------ceec-CCCHHHHHHHHHHHH
Confidence 45556654 47899996666555 33332 2222 346677666655444
No 79
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=56.31 E-value=41 Score=28.26 Aligned_cols=80 Identities=9% Similarity=-0.051 Sum_probs=44.5
Q ss_pred ceEEeecchhhhccCCCCcceeec-CCCcchhHHHHHHcc------cc-cc---------eEEEECC---cCC----HHH
Q 044725 25 GFLVSWSPQEQVLCHPSDVAFLTH-SRWNWNSTIESLSSM------SS-RG---------TGMEINQ---NVK----RDE 80 (121)
Q Consensus 25 g~v~~W~pQ~~iL~h~~v~~fvtH-~G~~~ns~~Eal~~G------~~-~g---------vG~~l~~---~~~----~~~ 80 (121)
+.+..+.+-..+++...+-++-+. =| .-.+++||+.+| +. .| -|..+.. .-+ .++
T Consensus 378 V~f~G~~~~~~~~~~adv~v~pS~~Eg-fgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~ 456 (500)
T TIGR02918 378 IHLKGHRNLSEVYKDYELYLSASTSEG-FGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITA 456 (500)
T ss_pred EEEcCCCCHHHHHHhCCEEEEcCcccc-ccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHH
Confidence 344455555667777776333332 22 125799999999 11 12 2333321 012 678
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHH
Q 044725 81 VKVLVRGMMEGDKGKPIKCMALEWK 105 (121)
Q Consensus 81 l~~~i~~vm~~~~g~~~r~~a~~l~ 105 (121)
++++|..++.++.-..|.+++.+.+
T Consensus 457 la~~I~~ll~~~~~~~~~~~a~~~a 481 (500)
T TIGR02918 457 LAEKIVEYFNSNDIDAFHEYSYQIA 481 (500)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHH
Confidence 9999999995433345556665543
No 80
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=55.76 E-value=34 Score=25.83 Aligned_cols=67 Identities=9% Similarity=-0.087 Sum_probs=37.8
Q ss_pred CceEEeecch-hhhccCCCCcceeec-CCCcchhHHHHHHcc------ccc--------ceEEEECCcCCHHHHHHHHHH
Q 044725 24 RGFLVSWSPQ-EQVLCHPSDVAFLTH-SRWNWNSTIESLSSM------SSR--------GTGMEINQNVKRDEVKVLVRG 87 (121)
Q Consensus 24 ~g~v~~W~pQ-~~iL~h~~v~~fvtH-~G~~~ns~~Eal~~G------~~~--------gvG~~l~~~~~~~~l~~~i~~ 87 (121)
+..+..+..+ ..+++...+..+-+. -| .-++++||+.+| +.- +.+..+. .-+.+++.++|.+
T Consensus 250 ~v~~~g~~~~~~~~~~~adi~v~ps~~E~-~~~~~lEAma~G~PvI~s~~~~~~~~i~~~~~~~~~-~~~~~~~a~~i~~ 327 (358)
T cd03812 250 KVIFLGVRNDVPELLQAMDVFLFPSLYEG-LPLVLIEAQASGLPCILSDTITKEVDLTDLVKFLSL-DESPEIWAEEILK 327 (358)
T ss_pred cEEEecccCCHHHHHHhcCEEEecccccC-CCHHHHHHHHhCCCEEEEcCCchhhhhccCccEEeC-CCCHHHHHHHHHH
Confidence 3334444323 345565555333322 12 136799999999 111 2222221 3356999999999
Q ss_pred HhcCC
Q 044725 88 MMEGD 92 (121)
Q Consensus 88 vm~~~ 92 (121)
++.++
T Consensus 328 l~~~~ 332 (358)
T cd03812 328 LKSED 332 (358)
T ss_pred HHhCc
Confidence 99887
No 81
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=53.97 E-value=82 Score=23.94 Aligned_cols=78 Identities=10% Similarity=0.093 Sum_probs=42.8
Q ss_pred ceEEeecch-hhhccCCCCcceeec-CCCcchhHHHHHHcc------c---------ccceEEEECCcCCHHHHHHHHHH
Q 044725 25 GFLVSWSPQ-EQVLCHPSDVAFLTH-SRWNWNSTIESLSSM------S---------SRGTGMEINQNVKRDEVKVLVRG 87 (121)
Q Consensus 25 g~v~~W~pQ-~~iL~h~~v~~fvtH-~G~~~ns~~Eal~~G------~---------~~gvG~~l~~~~~~~~l~~~i~~ 87 (121)
..+....++ ..+++...+..+-+. -| .-.+++||+.+| + .-..|..++ .-+.+++.+++..
T Consensus 255 v~~~g~~~~~~~~~~~~d~~v~ps~~E~-~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~-~~~~~~l~~~i~~ 332 (371)
T cd04962 255 VLFLGKQDHVEELLSIADLFLLPSEKES-FGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVD-VGDVEAMAEYALS 332 (371)
T ss_pred EEEecCcccHHHHHHhcCEEEeCCCcCC-CccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcC-CCCHHHHHHHHHH
Confidence 334444443 334555555333322 12 025899999999 1 112333332 2467899999999
Q ss_pred HhcCCC-cHHHHHHHHHH
Q 044725 88 MMEGDK-GKPIKCMALEW 104 (121)
Q Consensus 88 vm~~~~-g~~~r~~a~~l 104 (121)
++.+++ -.++++++.+.
T Consensus 333 l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 333 LLEDDELWQEFSRAARNR 350 (371)
T ss_pred HHhCHHHHHHHHHHHHHH
Confidence 997652 23455555554
No 82
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=53.79 E-value=66 Score=23.95 Aligned_cols=65 Identities=12% Similarity=0.063 Sum_probs=41.1
Q ss_pred cCCceEEeecchhh---hccCCCCcceeec--CCCcc-hhHHHHHHcc------cccc---------eEEEECCcCCHHH
Q 044725 22 RDRGFLVSWSPQEQ---VLCHPSDVAFLTH--SRWNW-NSTIESLSSM------SSRG---------TGMEINQNVKRDE 80 (121)
Q Consensus 22 ~~~g~v~~W~pQ~~---iL~h~~v~~fvtH--~G~~~-ns~~Eal~~G------~~~g---------vG~~l~~~~~~~~ 80 (121)
.++..+..++|+.+ +++...+..+.+. -| + .+++||+.+| +.-| .|..++ ..++
T Consensus 223 ~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~--~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~---~~~~ 297 (335)
T cd03802 223 GPDIEYLGEVGGAEKAELLGNARALLFPILWEEP--FGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVD---SVEE 297 (335)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCC--cchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeC---CHHH
Confidence 45666778888753 5676766554442 33 3 5799999999 1111 333332 2889
Q ss_pred HHHHHHHHhcC
Q 044725 81 VKVLVRGMMEG 91 (121)
Q Consensus 81 l~~~i~~vm~~ 91 (121)
+.+++..++..
T Consensus 298 l~~~l~~l~~~ 308 (335)
T cd03802 298 LAAAVARADRL 308 (335)
T ss_pred HHHHHHHHhcc
Confidence 99999988653
No 83
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=53.12 E-value=30 Score=27.66 Aligned_cols=48 Identities=6% Similarity=0.124 Sum_probs=30.5
Q ss_pred hhHHHHHHcc-------------------cccceEEEECCcCCHHHHHHHHHHHhcCCC-cHHHHHHHHHH
Q 044725 54 NSTIESLSSM-------------------SSRGTGMEINQNVKRDEVKVLVRGMMEGDK-GKPIKCMALEW 104 (121)
Q Consensus 54 ns~~Eal~~G-------------------~~~gvG~~l~~~~~~~~l~~~i~~vm~~~~-g~~~r~~a~~l 104 (121)
.+++||+.+| ...|.++. .-+.+++.+++..++.+++ .+.+.+++.+.
T Consensus 335 ~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~---~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~ 402 (425)
T PRK05749 335 HNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQ---VEDAEDLAKAVTYLLTDPDARQAYGEAGVAF 402 (425)
T ss_pred CCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEE---ECCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 5699999999 01222222 2468899999999998752 23444454443
No 84
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=52.84 E-value=18 Score=27.77 Aligned_cols=36 Identities=6% Similarity=-0.096 Sum_probs=28.1
Q ss_pred CCceEEeecchh-hhccCCCCcceeecCCCcchhHHHHHHcc
Q 044725 23 DRGFLVSWSPQE-QVLCHPSDVAFLTHSRWNWNSTIESLSSM 63 (121)
Q Consensus 23 ~~g~v~~W~pQ~-~iL~h~~v~~fvtH~G~~~ns~~Eal~~G 63 (121)
.+..+..+.++. .++....+ +||++| .++.|+++.|
T Consensus 224 ~~i~~~~~~~~m~~lm~~aDl--~Is~~G---~T~~E~~a~g 260 (279)
T TIGR03590 224 PNIILFIDVENMAELMNEADL--AIGAAG---STSWERCCLG 260 (279)
T ss_pred CCEEEEeCHHHHHHHHHHCCE--EEECCc---hHHHHHHHcC
Confidence 355677888875 67777775 899998 6899999886
No 85
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=52.22 E-value=58 Score=26.55 Aligned_cols=42 Identities=7% Similarity=0.034 Sum_probs=33.1
Q ss_pred cCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhcCCCCC
Q 044725 75 NVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKAEAATYIGDHLT 119 (121)
Q Consensus 75 ~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~~~a~~~gGss~ 119 (121)
.++.+.|...+..++.++ ..++......+.+++....|.++.
T Consensus 324 ~~~~~~i~~~~~~ll~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 365 (373)
T PF02684_consen 324 DATPENIAAELLELLENP---EKRKKQKELFREIRQLLGPGASSR 365 (373)
T ss_pred cCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHhhhhccCCH
Confidence 689999999999999877 556666777777777777777664
No 86
>PRK10307 putative glycosyl transferase; Provisional
Probab=51.36 E-value=79 Score=24.98 Aligned_cols=79 Identities=10% Similarity=0.074 Sum_probs=46.7
Q ss_pred CceEEeecchhh---hccCCCCcceeecCCC----cchhHHHHHHcc------ccc---------ceEEEECCcCCHHHH
Q 044725 24 RGFLVSWSPQEQ---VLCHPSDVAFLTHSRW----NWNSTIESLSSM------SSR---------GTGMEINQNVKRDEV 81 (121)
Q Consensus 24 ~g~v~~W~pQ~~---iL~h~~v~~fvtH~G~----~~ns~~Eal~~G------~~~---------gvG~~l~~~~~~~~l 81 (121)
+..+..|+|+.+ +++..++..+.+..+. .-+.++|++.+| ..- +.|..+. .-+.+++
T Consensus 285 ~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~~~G~~~~-~~d~~~l 363 (412)
T PRK10307 285 NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVEGIGVCVE-PESVEAL 363 (412)
T ss_pred ceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHhCCcEEeC-CCCHHHH
Confidence 455567777643 6777777555554331 012378999998 111 2233332 3467899
Q ss_pred HHHHHHHhcCCC-cHHHHHHHHH
Q 044725 82 KVLVRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 82 ~~~i~~vm~~~~-g~~~r~~a~~ 103 (121)
+++|.+++++++ ...+++++.+
T Consensus 364 a~~i~~l~~~~~~~~~~~~~a~~ 386 (412)
T PRK10307 364 VAAIAALARQALLRPKLGTVARE 386 (412)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999987652 2345555554
No 87
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=50.15 E-value=65 Score=26.06 Aligned_cols=69 Identities=7% Similarity=0.049 Sum_probs=40.0
Q ss_pred CCceEEeecchhhh---ccCC--CCcceeecCCC--cchhHHHHHHcc---------------cccceEEEECCcCCHHH
Q 044725 23 DRGFLVSWSPQEQV---LCHP--SDVAFLTHSRW--NWNSTIESLSSM---------------SSRGTGMEINQNVKRDE 80 (121)
Q Consensus 23 ~~g~v~~W~pQ~~i---L~h~--~v~~fvtH~G~--~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~ 80 (121)
+++.+..++|+.++ ++.. +...|+..+-. .-.+++||+.+| ..-..|..++ .-+.++
T Consensus 317 ~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~-~~d~~~ 395 (439)
T TIGR02472 317 GKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVD-VLDLEA 395 (439)
T ss_pred ceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeC-CCCHHH
Confidence 34444556665443 4332 11235554310 025799999999 1222344443 357889
Q ss_pred HHHHHHHHhcCC
Q 044725 81 VKVLVRGMMEGD 92 (121)
Q Consensus 81 l~~~i~~vm~~~ 92 (121)
+.++|.+++.++
T Consensus 396 la~~i~~ll~~~ 407 (439)
T TIGR02472 396 IASALEDALSDS 407 (439)
T ss_pred HHHHHHHHHhCH
Confidence 999999999875
No 88
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=49.54 E-value=53 Score=27.43 Aligned_cols=61 Identities=13% Similarity=0.220 Sum_probs=40.2
Q ss_pred eeecCCCcchhHHHHHHcc-------------------cccceEEEECCcCCHHHHHHHHHHHhcCCC-cHHHHHHHHHH
Q 044725 45 FLTHSRWNWNSTIESLSSM-------------------SSRGTGMEINQNVKRDEVKVLVRGMMEGDK-GKPIKCMALEW 104 (121)
Q Consensus 45 fvtH~G~~~ns~~Eal~~G-------------------~~~gvG~~l~~~~~~~~l~~~i~~vm~~~~-g~~~r~~a~~l 104 (121)
|+-+|| . ..+|+++.+ ...|.++.++. .+.+.+++..++.+++ ...|.+++.++
T Consensus 327 lv~~GG--H-N~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~---~~~l~~~v~~l~~~~~~r~~~~~~~~~~ 400 (419)
T COG1519 327 LVPIGG--H-NPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVED---ADLLAKAVELLLADEDKREAYGRAGLEF 400 (419)
T ss_pred ccCCCC--C-ChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECC---HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 667898 4 589999988 45566766652 6778878877777653 34566666655
Q ss_pred HHHHHHH
Q 044725 105 KKKAEAA 111 (121)
Q Consensus 105 ~~~~~~a 111 (121)
=...+.+
T Consensus 401 v~~~~ga 407 (419)
T COG1519 401 LAQNRGA 407 (419)
T ss_pred HHHhhHH
Confidence 4444443
No 89
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=47.40 E-value=1e+02 Score=23.14 Aligned_cols=65 Identities=9% Similarity=0.061 Sum_probs=37.9
Q ss_pred CceEEeecch-hhhccCCCCcceeec--CCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHHHH
Q 044725 24 RGFLVSWSPQ-EQVLCHPSDVAFLTH--SRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKVLV 85 (121)
Q Consensus 24 ~g~v~~W~pQ-~~iL~h~~v~~fvtH--~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~~i 85 (121)
++.+..|.++ ..+|+...+..+-++ -| .-++++||+.+| ..-..|..+. .-+.+++.++|
T Consensus 247 ~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~-~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~-~~~~~~l~~~i 324 (355)
T cd03819 247 RVTFVGHCSDMPAAYALADIVVSASTEPEA-FGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVP-PGDAEALAQAL 324 (355)
T ss_pred eEEEcCCcccHHHHHHhCCEEEecCCCCCC-CchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeC-CCCHHHHHHHH
Confidence 4445555332 345666666444442 22 026899999999 1222444443 45888999999
Q ss_pred HHHhc
Q 044725 86 RGMME 90 (121)
Q Consensus 86 ~~vm~ 90 (121)
..++.
T Consensus 325 ~~~~~ 329 (355)
T cd03819 325 DQILS 329 (355)
T ss_pred HHHHh
Confidence 75554
No 90
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=45.83 E-value=70 Score=19.61 Aligned_cols=16 Identities=13% Similarity=0.246 Sum_probs=14.9
Q ss_pred CHHHHHHHHHHHhcCC
Q 044725 77 KRDEVKVLVRGMMEGD 92 (121)
Q Consensus 77 ~~~~l~~~i~~vm~~~ 92 (121)
+.+++..++..++.++
T Consensus 48 ~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 48 DPEELAEKIEYLLENP 63 (92)
T ss_pred CHHHHHHHHHHHHCCH
Confidence 8999999999999876
No 91
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=44.46 E-value=1e+02 Score=23.16 Aligned_cols=69 Identities=13% Similarity=0.052 Sum_probs=38.1
Q ss_pred CCceEEeecchhh---hccCCCCcceeecC--CCcchhHHHHHHcc------cccceEEEECC---cCCHHH-HHHHHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFLTHS--RWNWNSTIESLSSM------SSRGTGMEINQ---NVKRDE-VKVLVRG 87 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fvtH~--G~~~ns~~Eal~~G------~~~gvG~~l~~---~~~~~~-l~~~i~~ 87 (121)
+++.+..++|+.+ .+....+-.+-++. | .-++++||+.+| +.-+....+.. .+...+ +.+++..
T Consensus 248 ~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~-~~~~~~EAma~G~PvI~s~~~~~~e~~~~~g~~~~~~~~l~~~i~~ 326 (363)
T cd04955 248 PRIIFVGPIYDQELLELLRYAALFYLHGHSVGG-TNPSLLEAMAYGCPVLASDNPFNREVLGDKAIYFKVGDDLASLLEE 326 (363)
T ss_pred CcEEEccccChHHHHHHHHhCCEEEeCCccCCC-CChHHHHHHHcCCCEEEecCCccceeecCCeeEecCchHHHHHHHH
Confidence 4556678888754 44444442222222 2 125799999999 22222222221 122222 9999999
Q ss_pred HhcCC
Q 044725 88 MMEGD 92 (121)
Q Consensus 88 vm~~~ 92 (121)
++.++
T Consensus 327 l~~~~ 331 (363)
T cd04955 327 LEADP 331 (363)
T ss_pred HHhCH
Confidence 99865
No 92
>PLN02949 transferase, transferring glycosyl groups
Probab=43.10 E-value=1.3e+02 Score=24.97 Aligned_cols=66 Identities=12% Similarity=0.042 Sum_probs=39.3
Q ss_pred CCceEEeecchhh---hccCCCCccee---ecCCCcchhHHHHHHcc------cccceEEE--E------CC--cCCHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHPSDVAFL---THSRWNWNSTIESLSSM------SSRGTGME--I------NQ--NVKRDE 80 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~~v~~fv---tH~G~~~ns~~Eal~~G------~~~gvG~~--l------~~--~~~~~~ 80 (121)
+++.+..++|+.+ +|+...+..+- -|-| .+++||+.+| ..-|.-.. . .+ .-+.++
T Consensus 335 ~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FG---ivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~ 411 (463)
T PLN02949 335 GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFG---ISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEE 411 (463)
T ss_pred CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCC---hHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCCCHHH
Confidence 4555667887644 56666543321 2333 5799999999 22222100 1 01 127889
Q ss_pred HHHHHHHHhcC
Q 044725 81 VKVLVRGMMEG 91 (121)
Q Consensus 81 l~~~i~~vm~~ 91 (121)
+.++|.+++.+
T Consensus 412 la~ai~~ll~~ 422 (463)
T PLN02949 412 YADAILEVLRM 422 (463)
T ss_pred HHHHHHHHHhC
Confidence 99999999974
No 93
>PHA01633 putative glycosyl transferase group 1
Probab=34.85 E-value=1.5e+02 Score=23.69 Aligned_cols=17 Identities=6% Similarity=-0.005 Sum_probs=13.6
Q ss_pred cCCHHHHHHHHHHHhcC
Q 044725 75 NVKRDEVKVLVRGMMEG 91 (121)
Q Consensus 75 ~~~~~~l~~~i~~vm~~ 91 (121)
..+.+++..+|..++..
T Consensus 291 ~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 291 KFQIEDMANAIILAFEL 307 (335)
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 35889999999988543
No 94
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=34.63 E-value=1.9e+02 Score=21.51 Aligned_cols=66 Identities=8% Similarity=0.033 Sum_probs=37.1
Q ss_pred CceEEeecch-hhhccCCCCcceeecC-CCcchhHHHHHHcc------cccc-------eEEEECCcCCHHHHHHHHHHH
Q 044725 24 RGFLVSWSPQ-EQVLCHPSDVAFLTHS-RWNWNSTIESLSSM------SSRG-------TGMEINQNVKRDEVKVLVRGM 88 (121)
Q Consensus 24 ~g~v~~W~pQ-~~iL~h~~v~~fvtH~-G~~~ns~~Eal~~G------~~~g-------vG~~l~~~~~~~~l~~~i~~v 88 (121)
+..+.....+ ..+|+...+-.+-++. | .-+.++||+.+| +.-+ .|..+. .-+.+++.+++.++
T Consensus 246 ~v~~~g~~~~~~~~~~~ad~~v~~s~~e~-~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~g~~~~-~~~~~~~~~~i~~l 323 (360)
T cd04951 246 RVKLLGLRDDIAAYYNAADLFVLSSAWEG-FGLVVAEAMACELPVVATDAGGVREVVGDSGLIVP-ISDPEALANKIDEI 323 (360)
T ss_pred cEEEecccccHHHHHHhhceEEecccccC-CChHHHHHHHcCCCEEEecCCChhhEecCCceEeC-CCCHHHHHHHHHHH
Confidence 3444444333 3466666663333331 1 025789999999 1111 122222 35788999999999
Q ss_pred hcC
Q 044725 89 MEG 91 (121)
Q Consensus 89 m~~ 91 (121)
+.+
T Consensus 324 l~~ 326 (360)
T cd04951 324 LKM 326 (360)
T ss_pred HhC
Confidence 853
No 95
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=34.49 E-value=1.9e+02 Score=23.64 Aligned_cols=38 Identities=8% Similarity=0.198 Sum_probs=27.9
Q ss_pred hhHHHHHHcc---------------ccc-----c-eEEEECCcCCHHHHHHHHHHHhcCC
Q 044725 54 NSTIESLSSM---------------SSR-----G-TGMEINQNVKRDEVKVLVRGMMEGD 92 (121)
Q Consensus 54 ns~~Eal~~G---------------~~~-----g-vG~~l~~~~~~~~l~~~i~~vm~~~ 92 (121)
++++||+.+| +.. | .|..+. ..+.+++.++|.+++.++
T Consensus 385 ~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~-~~d~~~la~ai~~ll~~~ 443 (475)
T cd03813 385 LVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVP-PADPEALARAILRLLKDP 443 (475)
T ss_pred hHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEEC-CCCHHHHHHHHHHHhcCH
Confidence 6799999999 121 1 454443 457899999999999875
No 96
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=34.46 E-value=2.2e+02 Score=25.21 Aligned_cols=80 Identities=18% Similarity=0.082 Sum_probs=42.1
Q ss_pred CCceEEeecch-hhhccCCCCcceee-cCCCcchhHHHHHHcc------c---------ccceEEEECC-cCCHHHHHHH
Q 044725 23 DRGFLVSWSPQ-EQVLCHPSDVAFLT-HSRWNWNSTIESLSSM------S---------SRGTGMEINQ-NVKRDEVKVL 84 (121)
Q Consensus 23 ~~g~v~~W~pQ-~~iL~h~~v~~fvt-H~G~~~ns~~Eal~~G------~---------~~gvG~~l~~-~~~~~~l~~~ 84 (121)
+++.+..|.++ ..+|+...+-.+-+ +-| .-++++||+.+| . +-..|..+.. +.+.+++.++
T Consensus 574 ~~V~flG~~~dv~~ll~aaDv~VlpS~~Eg-fp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~a 652 (694)
T PRK15179 574 ERILFTGLSRRVGYWLTQFNAFLLLSRFEG-LPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEA 652 (694)
T ss_pred CcEEEcCCcchHHHHHHhcCEEEecccccc-chHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHH
Confidence 34455566543 33555555432222 233 136799999999 1 1223555543 4556677777
Q ss_pred HHHHhcCC-CcHHHHHHHHH
Q 044725 85 VRGMMEGD-KGKPIKCMALE 103 (121)
Q Consensus 85 i~~vm~~~-~g~~~r~~a~~ 103 (121)
+.+++... .-..+++++.+
T Consensus 653 L~~ll~~l~~~~~l~~~ar~ 672 (694)
T PRK15179 653 LARIHDMCAADPGIARKAAD 672 (694)
T ss_pred HHHHHhChhccHHHHHHHHH
Confidence 77766421 11255555544
No 97
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=34.26 E-value=30 Score=25.19 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=22.9
Q ss_pred eecch-hhhccCCCCcceeecCCCcchhHHHHHHcc
Q 044725 29 SWSPQ-EQVLCHPSDVAFLTHSRWNWNSTIESLSSM 63 (121)
Q Consensus 29 ~W~pQ-~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G 63 (121)
.+-|- .+....+. ..|+|+| .+|++|.+..|
T Consensus 69 ~f~psl~e~I~~Ad--lVIsHAG--aGS~letL~l~ 100 (170)
T KOG3349|consen 69 DFSPSLTEDIRSAD--LVISHAG--AGSCLETLRLG 100 (170)
T ss_pred ecCccHHHHHhhcc--EEEecCC--cchHHHHHHcC
Confidence 44554 34445555 4999999 99999999877
No 98
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=33.41 E-value=1.4e+02 Score=22.95 Aligned_cols=73 Identities=10% Similarity=0.077 Sum_probs=40.9
Q ss_pred eecch---hhhccCCCCcceeecC-CCcchhHHHHHHcc---------------cccceEEEECCcCCH------HHHHH
Q 044725 29 SWSPQ---EQVLCHPSDVAFLTHS-RWNWNSTIESLSSM---------------SSRGTGMEINQNVKR------DEVKV 83 (121)
Q Consensus 29 ~W~pQ---~~iL~h~~v~~fvtH~-G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~------~~l~~ 83 (121)
.++|. ..++++.++-.+-+.. + .-.+++||+.+| .....|..++. -+. +++.+
T Consensus 267 ~~~~~~~~~~~~~~aDv~v~ps~~e~-~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~-~~~~~~~~~~~l~~ 344 (388)
T TIGR02149 267 KMLPKEELVELLSNAEVFVCPSIYEP-LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPP-DNSDADGFQAELAK 344 (388)
T ss_pred CCCCHHHHHHHHHhCCEEEeCCccCC-CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCC-CCCcccchHHHHHH
Confidence 45554 3356777653322221 1 025789999999 22234555543 223 78999
Q ss_pred HHHHHhcCCC-cHHHHHHHHH
Q 044725 84 LVRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 84 ~i~~vm~~~~-g~~~r~~a~~ 103 (121)
+|.+++.+++ -+.+.+++.+
T Consensus 345 ~i~~l~~~~~~~~~~~~~a~~ 365 (388)
T TIGR02149 345 AINILLADPELAKKMGIAGRK 365 (388)
T ss_pred HHHHHHhCHHHHHHHHHHHHH
Confidence 9999998752 2334444443
No 99
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=32.48 E-value=1e+02 Score=25.47 Aligned_cols=63 Identities=11% Similarity=0.063 Sum_probs=46.3
Q ss_pred ceEEeecchhhhccCCCCcceeecCCCcchhHHHHHHcc----------------------cccceEEEECC-cCCHHHH
Q 044725 25 GFLVSWSPQEQVLCHPSDVAFLTHSRWNWNSTIESLSSM----------------------SSRGTGMEINQ-NVKRDEV 81 (121)
Q Consensus 25 g~v~~W~pQ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G----------------------~~~gvG~~l~~-~~~~~~l 81 (121)
..+..+--+..-|-+.+ ...|+-|| .|.+.|=++.| +++|+.-.+.. ++++..+
T Consensus 279 i~I~~f~~~~~~ll~gA-~~vVSm~G--YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~L 355 (400)
T COG4671 279 ISIFEFRNDFESLLAGA-RLVVSMGG--YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNL 355 (400)
T ss_pred eEEEEhhhhHHHHHHhh-heeeeccc--chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHH
Confidence 34566666644444433 35899999 99999999999 56676555543 7889999
Q ss_pred HHHHHHHhc
Q 044725 82 KVLVRGMME 90 (121)
Q Consensus 82 ~~~i~~vm~ 90 (121)
+++++..+.
T Consensus 356 a~al~~~l~ 364 (400)
T COG4671 356 ADALKAALA 364 (400)
T ss_pred HHHHHhccc
Confidence 999998886
No 100
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=30.79 E-value=1e+02 Score=17.12 Aligned_cols=26 Identities=12% Similarity=0.339 Sum_probs=19.2
Q ss_pred CHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 044725 77 KRDEVKVLVRGMMEGDKGKPIKCMALEW 104 (121)
Q Consensus 77 ~~~~l~~~i~~vm~~~~g~~~r~~a~~l 104 (121)
+.+++..+|..|..+. .++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4688999999999763 4788888775
No 101
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=30.67 E-value=29 Score=19.71 Aligned_cols=20 Identities=20% Similarity=0.408 Sum_probs=14.7
Q ss_pred cCCceEEeecchhhhccCCC
Q 044725 22 RDRGFLVSWSPQEQVLCHPS 41 (121)
Q Consensus 22 ~~~g~v~~W~pQ~~iL~h~~ 41 (121)
+.....+.|.|..++|+-..
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t 30 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGT 30 (47)
T ss_pred CCcEEEEEECCCCCEEEEEE
Confidence 34466889999999886443
No 102
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=30.30 E-value=1.5e+02 Score=24.57 Aligned_cols=53 Identities=9% Similarity=-0.006 Sum_probs=31.8
Q ss_pred hhHHHHHHcccc----------cc------eEEEECCcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Q 044725 54 NSTIESLSSMSS----------RG------TGMEINQNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKA 108 (121)
Q Consensus 54 ns~~Eal~~G~~----------~g------vG~~l~~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~ 108 (121)
+.++||+.+|.. -| -|..++ ..+.++++++|.+++..+. ++.+++..++.+.+
T Consensus 370 Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~~gllVn-P~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v 438 (456)
T TIGR02400 370 LVAKEYVAAQDPKDGVLILSEFAGAAQELNGALLVN-PYDIDGMADAIARALTMPL-EEREERHRAMMDKL 438 (456)
T ss_pred ccHHHHHHhcCCCCceEEEeCCCCChHHhCCcEEEC-CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHH
Confidence 358899999821 12 122222 3578899999999987542 24555555555443
No 103
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=28.47 E-value=3.2e+02 Score=22.16 Aligned_cols=51 Identities=6% Similarity=0.087 Sum_probs=32.0
Q ss_pred hccCCCCcceee---cCCCcchhHHHHHHcc------c---------cc------ceEEEECCcCCHHHHHHHHHHHhc
Q 044725 36 VLCHPSDVAFLT---HSRWNWNSTIESLSSM------S---------SR------GTGMEINQNVKRDEVKVLVRGMME 90 (121)
Q Consensus 36 iL~h~~v~~fvt---H~G~~~ns~~Eal~~G------~---------~~------gvG~~l~~~~~~~~l~~~i~~vm~ 90 (121)
+++...+-.+-+ .+| .+.+||+.+| . .. +.|..+. ..+.+++.++|.+++.
T Consensus 362 ~~~~aDv~l~pS~~E~~g---l~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~-~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 362 IYAGADFILMPSRFEPCG---LTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFE-EYDPGALLAALSRALR 436 (473)
T ss_pred HHHhCCEEEeCCCcCCcH---HHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeC-CCCHHHHHHHHHHHHH
Confidence 566666533222 223 5789999999 1 11 4454443 3578899999998875
No 104
>PF07765 KIP1: KIP1-like protein; InterPro: IPR011684 This is a group of sequences found exclusively in plants. They are similar to kinase interacting protein 1 (KIP1), which has been found to interact with the kinase domain of PRK1, a receptor-like kinase []. This particular region contains two coiled-coils, which are described as motifs involved in protein-protein interactions []. It has also been suggested that the coiled-coils of the protein allow it to dimerise in vivo [].
Probab=26.85 E-value=87 Score=19.83 Aligned_cols=26 Identities=15% Similarity=0.263 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHhc--CCCcHHHHHHHH
Q 044725 77 KRDEVKVLVRGMME--GDKGKPIKCMAL 102 (121)
Q Consensus 77 ~~~~l~~~i~~vm~--~~~g~~~r~~a~ 102 (121)
+-.++...|+.+|. +++|+++.++|.
T Consensus 19 ~l~dmd~kvk~mlklieedgdSfakrAE 46 (74)
T PF07765_consen 19 NLSDMDEKVKAMLKLIEEDGDSFAKRAE 46 (74)
T ss_pred HHHHHHHHHHHHHHHhccCcchHHHhhH
Confidence 34567777777653 456788998887
No 105
>PF06345 Drf_DAD: DRF Autoregulatory Domain; InterPro: IPR010465 This domain is found in Diaphanous-related formins (Drfs). It binds the N-terminal GTPase-binding domain; this link is broken when GTP-bound Rho binds to the GBD and activates the protein. The addition of diaphanous activating domains (DAD) to mammalian cells induces actin filament formation, stabilises microtubules, and activates serum-response mediated transcription [].; PDB: 3O4X_H 3OBV_E 2BAP_C 2F31_B.
Probab=25.89 E-value=48 Score=14.39 Aligned_cols=11 Identities=27% Similarity=0.359 Sum_probs=8.0
Q ss_pred chhHHHHHHcc
Q 044725 53 WNSTIESLSSM 63 (121)
Q Consensus 53 ~ns~~Eal~~G 63 (121)
+.|.+||+..|
T Consensus 3 mdsllealqtg 13 (15)
T PF06345_consen 3 MDSLLEALQTG 13 (15)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHcc
Confidence 56788888655
No 106
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=25.48 E-value=2.5e+02 Score=21.65 Aligned_cols=75 Identities=13% Similarity=0.066 Sum_probs=39.9
Q ss_pred CceEEeec--chh---hhccCCCCcceeecCCC--cchhHHHHHHcc------ccc---------ceEEEECCcCCHHHH
Q 044725 24 RGFLVSWS--PQE---QVLCHPSDVAFLTHSRW--NWNSTIESLSSM------SSR---------GTGMEINQNVKRDEV 81 (121)
Q Consensus 24 ~g~v~~W~--pQ~---~iL~h~~v~~fvtH~G~--~~ns~~Eal~~G------~~~---------gvG~~l~~~~~~~~l 81 (121)
+..+..+. |+. .+++...+ |+..+-. .-.+++||+.+| +.- ..|...+ +.+++
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~---~~~~~ 327 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD---TVEEA 327 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC---CcHHH
Confidence 44455555 332 35566665 5543320 125799999999 111 2233222 45678
Q ss_pred HHHHHHHhcCCC-cHHHHHHHHH
Q 044725 82 KVLVRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 82 ~~~i~~vm~~~~-g~~~r~~a~~ 103 (121)
..+|.+++.+++ -+.+.+++.+
T Consensus 328 a~~i~~ll~~~~~~~~~~~~a~~ 350 (372)
T cd03792 328 AVRILYLLRDPELRRKMGANARE 350 (372)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHH
Confidence 888999987652 2234444433
No 107
>PF15586 Imm47: Immunity protein 47
Probab=25.44 E-value=1.2e+02 Score=20.61 Aligned_cols=42 Identities=21% Similarity=0.261 Sum_probs=32.6
Q ss_pred ceEEEECCcCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Q 044725 67 GTGMEINQNVKRDEVKVLVRGMMEGDKGKPIKCMALEWKKKA 108 (121)
Q Consensus 67 gvG~~l~~~~~~~~l~~~i~~vm~~~~g~~~r~~a~~l~~~~ 108 (121)
|-+..+-...+-++|.+.|.+++..=+|+++.+-+++|++.+
T Consensus 67 gr~~LIv~~yd~~~I~~~i~~~i~~c~~~~W~~~~~kLsr~f 108 (116)
T PF15586_consen 67 GRHMLIVEEYDYDEIKKTIERIIESCEGDDWDEIAEKLSRYF 108 (116)
T ss_pred ccceEEEecCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHhe
Confidence 334444446899999999999998666678999999998764
No 108
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=24.52 E-value=34 Score=20.96 Aligned_cols=21 Identities=29% Similarity=0.183 Sum_probs=16.3
Q ss_pred ecchhhhccCCCCcceeecCC
Q 044725 30 WSPQEQVLCHPSDVAFLTHSR 50 (121)
Q Consensus 30 W~pQ~~iL~h~~v~~fvtH~G 50 (121)
-.|+..+|+.+.-+..||+.|
T Consensus 24 p~P~~n~LsNg~y~~mvt~~G 44 (66)
T PF06204_consen 24 PAPWVNVLSNGSYGVMVTNSG 44 (66)
T ss_dssp SS--EEEE-SSSEEEEEETTS
T ss_pred CCCEEEEeeCCcEEEEEcCCC
Confidence 468888999999999999999
No 109
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=24.21 E-value=1.3e+02 Score=20.34 Aligned_cols=26 Identities=15% Similarity=0.028 Sum_probs=17.7
Q ss_pred CCcHHHHHHHHHHHHHHHHHhhcCCC
Q 044725 92 DKGKPIKCMALEWKKKAEAATYIGDH 117 (121)
Q Consensus 92 ~~g~~~r~~a~~l~~~~~~a~~~gGs 117 (121)
++.+++|.++..+=+..++.+...+.
T Consensus 37 ~e~~~lR~r~~~~Lk~~r~rl~~~~d 62 (104)
T COG4575 37 DEAEELRSKAESALKEARDRLGDTGD 62 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 44567777777777777777666543
No 110
>PHA03159 hypothetical protein; Provisional
Probab=24.11 E-value=26 Score=24.80 Aligned_cols=13 Identities=23% Similarity=0.358 Sum_probs=11.0
Q ss_pred ceeecCCCcchhHHH
Q 044725 44 AFLTHSRWNWNSTIE 58 (121)
Q Consensus 44 ~fvtH~G~~~ns~~E 58 (121)
+|+.||| |.+..+
T Consensus 114 WF~~hGG--~kGL~~ 126 (160)
T PHA03159 114 WFIDHGG--EKGLVE 126 (160)
T ss_pred HHHHcCc--HhHHHH
Confidence 7999999 987664
No 111
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=23.91 E-value=3.1e+02 Score=25.75 Aligned_cols=80 Identities=8% Similarity=0.026 Sum_probs=45.2
Q ss_pred CCceEEeecchhh---hccCC--CCcceeecCCC--cchhHHHHHHcc------c---------ccceEEEECCcCCHHH
Q 044725 23 DRGFLVSWSPQEQ---VLCHP--SDVAFLTHSRW--NWNSTIESLSSM------S---------SRGTGMEINQNVKRDE 80 (121)
Q Consensus 23 ~~g~v~~W~pQ~~---iL~h~--~v~~fvtH~G~--~~ns~~Eal~~G------~---------~~gvG~~l~~~~~~~~ 80 (121)
+++.+..++|+.+ ++... ....|+.-+-. .-..++||+.+| . .-.-|..++ .-+.++
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVd-P~D~ea 626 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVD-PHDQQA 626 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEEC-CCCHHH
Confidence 3444556666644 33332 12245554310 025799999999 1 112355443 357889
Q ss_pred HHHHHHHHhcCCC-cHHHHHHHHH
Q 044725 81 VKVLVRGMMEGDK-GKPIKCMALE 103 (121)
Q Consensus 81 l~~~i~~vm~~~~-g~~~r~~a~~ 103 (121)
|.++|.+++.+++ -..|.+++.+
T Consensus 627 LA~AL~~LL~Dpelr~~m~~~gr~ 650 (1050)
T TIGR02468 627 IADALLKLVADKQLWAECRQNGLK 650 (1050)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHH
Confidence 9999999998762 2345544443
No 112
>COG1422 Predicted membrane protein [Function unknown]
Probab=22.67 E-value=1.4e+02 Score=22.45 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=22.9
Q ss_pred HHHHHHhcCC-CcHHHHHHHHHHHHHHHHHhhcC
Q 044725 83 VLVRGMMEGD-KGKPIKCMALEWKKKAEAATYIG 115 (121)
Q Consensus 83 ~~i~~vm~~~-~g~~~r~~a~~l~~~~~~a~~~g 115 (121)
.-+++.+.|- +=+++++.++++++..++|-+.|
T Consensus 62 ~i~~~~liD~ekm~~~qk~m~efq~e~~eA~~~~ 95 (201)
T COG1422 62 TILQKLLIDQEKMKELQKMMKEFQKEFREAQESG 95 (201)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444555443 33589999999999998887755
No 113
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=22.00 E-value=1.9e+02 Score=22.04 Aligned_cols=50 Identities=14% Similarity=0.176 Sum_probs=32.0
Q ss_pred hccCCCCcceeecCCCcchhHHHHHHcc---------------cccceEEEECCcCCHHHHHHHHHHHhcCC
Q 044725 36 VLCHPSDVAFLTHSRWNWNSTIESLSSM---------------SSRGTGMEINQNVKRDEVKVLVRGMMEGD 92 (121)
Q Consensus 36 iL~h~~v~~fvtH~G~~~ns~~Eal~~G---------------~~~gvG~~l~~~~~~~~l~~~i~~vm~~~ 92 (121)
++.... +||+.+| +-+.|++..| ...|++..+ .-+.++|.+++.+++.++
T Consensus 274 l~~~ad--~~v~~Sg---gi~~Ea~~~g~PvI~~~~~~~~~~~~~~g~~~~~--~~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 274 LLKNAD--LVLTDSG---GIQEEASFLGVPVLNLRDRTERPETVESGTNVLV--GTDPEAILAAIEKLLSDE 338 (363)
T ss_pred HHHcCc--EEEEcCc---cHHhhhhhcCCCEEeeCCCCccchhhheeeEEec--CCCHHHHHHHHHHHhcCc
Confidence 455555 4888877 3467888887 112222222 125789999999999875
No 114
>KOG2635 consensus Medium subunit of clathrin adaptor complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.77 E-value=1.4e+02 Score=25.42 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=26.3
Q ss_pred HHHHHHHHHh-cCCC---cHHHHHHHHHHHHHHHHHhhcCCCC
Q 044725 80 EVKVLVRGMM-EGDK---GKPIKCMALEWKKKAEAATYIGDHL 118 (121)
Q Consensus 80 ~l~~~i~~vm-~~~~---g~~~r~~a~~l~~~~~~a~~~gGss 118 (121)
.=++.|.+++ .+.+ -+.+|++|++|+..-.++.+.||++
T Consensus 138 SHEEKi~e~v~~nke~ea~q~mkrKaKElqr~r~ea~rrgg~~ 180 (512)
T KOG2635|consen 138 SHEEKIHELVMRNKEREAKQEMKRKAKELQRARKEAERRGGSL 180 (512)
T ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 3445555544 3322 2468889999988888899999754
No 115
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=21.12 E-value=1.6e+02 Score=24.49 Aligned_cols=25 Identities=12% Similarity=-0.028 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 96 PIKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 96 ~~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
.||+|+.+|+..+.++++.-|..+.
T Consensus 313 ~Mr~Ri~~mR~~lv~~L~~~~~~~~ 337 (396)
T COG1448 313 EMRQRILEMRQALVDALKALGAPRN 337 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 7999999999999999888665543
No 116
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=20.87 E-value=3.1e+02 Score=22.67 Aligned_cols=49 Identities=6% Similarity=0.038 Sum_probs=31.5
Q ss_pred cccceEEE-EC-CcCCHHHHHHHHHHHhcCCC--cHHHHHHHHHHHHHHHHHh
Q 044725 64 SSRGTGME-IN-QNVKRDEVKVLVRGMMEGDK--GKPIKCMALEWKKKAEAAT 112 (121)
Q Consensus 64 ~~~gvG~~-l~-~~~~~~~l~~~i~~vm~~~~--g~~~r~~a~~l~~~~~~a~ 112 (121)
+++|.... ++ ..++.+++.+.+.+++.+.+ .+.+++++.++++.+.+.+
T Consensus 363 ~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~~~~~ 415 (426)
T PRK10017 363 QQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLAEAVSRERQTGMQMV 415 (426)
T ss_pred HHcCCccEEechhhCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44454433 22 26788899999999998643 2456777777777665543
No 117
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=20.59 E-value=1.9e+02 Score=23.40 Aligned_cols=53 Identities=9% Similarity=0.122 Sum_probs=35.8
Q ss_pred hhhccCCCCcceeecCCCcchhHHHHHHcc------c-----------cc-----ceEEEECCcCCHHHHHHHHHHHhcC
Q 044725 34 EQVLCHPSDVAFLTHSRWNWNSTIESLSSM------S-----------SR-----GTGMEINQNVKRDEVKVLVRGMMEG 91 (121)
Q Consensus 34 ~~iL~h~~v~~fvtH~G~~~ns~~Eal~~G------~-----------~~-----gvG~~l~~~~~~~~l~~~i~~vm~~ 91 (121)
.++++..++ +|+=+| . ++.|+...| - .. |-++.+. ..+.+.|.+.+..++.+
T Consensus 291 ~~~l~~ADl--vI~rSG--t-~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~-~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 291 AEILHWADL--GIAMAG--T-ATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLA-SKNPEQAAQVVRQLLAD 364 (396)
T ss_pred HHHHHhCCE--EEECcC--H-HHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecC-CCCHHHHHHHHHHHHcC
Confidence 456777764 888888 5 459999888 0 11 3333332 45568999999999987
Q ss_pred C
Q 044725 92 D 92 (121)
Q Consensus 92 ~ 92 (121)
+
T Consensus 365 ~ 365 (396)
T TIGR03492 365 P 365 (396)
T ss_pred H
Confidence 5
No 118
>PF06831 H2TH: Formamidopyrimidine-DNA glycosylase H2TH domain; InterPro: IPR015886 This entry represents a helix-2turn-helix DNA-binding domain found in DNA glycosylase/AP lyase enzymes, which are involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Most damage to bases in DNA is repaired by the base excision repair pathway []. These enzymes are primarily from bacteria, and have both DNA glycosylase activity (3.2.2 from EC) and AP lyase activity (4.2.99.18 from EC). Examples include formamidopyrimidine-DNA glycosylases (Fpg; MutM) and endonuclease VIII (Nei). Formamidopyrimidine-DNA glycosylases (Fpg, MutM) is a trifunctional DNA base excision repair enzyme that removes a wide range of oxidation-damaged bases (N-glycosylase activity; 3.2.2.23 from EC) and cleaves both the 3'- and 5'-phosphodiester bonds of the resulting apurinic/apyrimidinic site (AP lyase activity; 4.2.99.18 from EC). Fpg has a preference for oxidised purines, excising oxidized purine bases such as 7,8-dihydro-8-oxoguanine (8-oxoG). ITs AP (apurinic/apyrimidinic) lyase activity introduces nicks in the DNA strand, cleaving the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. Fpg is a monomer composed of 2 domains connected by a flexible hinge []. The two DNA-binding motifs (a zinc finger and the helix-two-turns-helix motifs) suggest that the oxidized base is flipped out from double-stranded DNA in the binding mode and excised by a catalytic mechanism similar to that of bifunctional base excision repair enzymes []. Fpg binds one ion of zinc at the C terminus, which contains four conserved and essential cysteines [, ]. Endonuclease VIII (Nei) has the same enzyme activities as Fpg above (3.2.2 from EC, 4.2.99.18 from EC), but with a preference for oxidized pyrimidines, such as thymine glycol, 5,6-dihydrouracil and 5,6-dihydrothymine []. These protein contains three structural domains: an N-terminal catalytic core domain, a central helix-two turn-helix (H2TH) module and a C-terminal zinc finger []. The N-terminal catalytic domain and the C-terminal zinc finger straddle the DNA with the long axis of the protein oriented roughly orthogonal to the helical axis of the DNA. Residues that contact DNA are located in the catalytic domain and in a beta-hairpin loop formed by the zinc finger []. This entry represents the central domain containing the DNA-binding helix-two turn-helix domain [].; GO: 0003684 damaged DNA binding, 0003906 DNA-(apurinic or apyrimidinic site) lyase activity, 0008270 zinc ion binding, 0016799 hydrolase activity, hydrolyzing N-glycosyl compounds, 0006289 nucleotide-excision repair; PDB: 3GQ3_A 3JR5_A 3SAT_A 3GPX_A 2F5Q_A 3SBJ_A 3U6S_A 3SAU_A 3SAR_A 2F5P_A ....
Probab=20.47 E-value=1.9e+02 Score=18.46 Aligned_cols=24 Identities=17% Similarity=0.217 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCC
Q 044725 97 IKCMALEWKKKAEAATYIGDHLTR 120 (121)
Q Consensus 97 ~r~~a~~l~~~~~~a~~~gGss~~ 120 (121)
+++=...++..++.+++-||+|-+
T Consensus 67 ~~~l~~~~~~vl~~ai~~gg~t~~ 90 (92)
T PF06831_consen 67 LRRLHEAIKRVLREAIEVGGTTIR 90 (92)
T ss_dssp HHHHHHHHHHHHHHHHHTT-B-SS
T ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Confidence 444455566777778888888754
No 119
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=20.24 E-value=4.5e+02 Score=20.88 Aligned_cols=73 Identities=14% Similarity=0.054 Sum_probs=44.4
Q ss_pred eeecCCCcchhHHHHHHcccccceEEEECC-cCCHHHHHHHHHHHhcCC-C----cHHHHHHHHHHHHHHHHHhhcCCCC
Q 044725 45 FLTHSRWNWNSTIESLSSMSSRGTGMEINQ-NVKRDEVKVLVRGMMEGD-K----GKPIKCMALEWKKKAEAATYIGDHL 118 (121)
Q Consensus 45 fvtH~G~~~ns~~Eal~~G~~~gvG~~l~~-~~~~~~l~~~i~~vm~~~-~----g~~~r~~a~~l~~~~~~a~~~gGss 118 (121)
||-||| -.+-.|-+..+-..|+. .+|- +=.+-....+||+.+... + .+-++.....|++.+.+.++.=||.
T Consensus 207 lVlHGg--SGip~~eI~~aI~~GV~-KvNi~Td~~~A~~~avr~~~~~~~k~~DpR~~l~~a~~am~~~v~~~~~~fgs~ 283 (286)
T COG0191 207 LVLHGG--SGIPDEEIREAIKLGVA-KVNIDTDLQLAFTAAVREYLAENPKEYDPRKYLKPAIEAMKEVVKEKIKEFGSA 283 (286)
T ss_pred EEEeCC--CCCCHHHHHHHHHhCce-EEeeCcHHHHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 999999 66544444333233443 2221 334556778888887532 1 1346677777888888888777766
Q ss_pred CC
Q 044725 119 TR 120 (121)
Q Consensus 119 ~~ 120 (121)
.+
T Consensus 284 gk 285 (286)
T COG0191 284 GK 285 (286)
T ss_pred CC
Confidence 53
Done!