Query 044727
Match_columns 380
No_of_seqs 152 out of 558
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 10:29:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044727.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044727hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2efj_A 3,7-dimethylxanthine me 100.0 1E-97 4E-102 744.2 29.9 363 13-380 1-378 (384)
2 1m6e_X S-adenosyl-L-methionnin 100.0 3.8E-97 1E-101 734.8 24.9 347 13-380 1-357 (359)
3 3b5i_A S-adenosyl-L-methionine 100.0 7.1E-94 2.4E-98 715.5 29.1 357 13-378 1-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 99.6 3.6E-14 1.2E-18 134.0 16.4 235 20-364 25-259 (279)
5 2p35_A Trans-aconitate 2-methy 99.5 7.2E-14 2.5E-18 129.5 15.5 229 27-364 8-238 (259)
6 2yqz_A Hypothetical protein TT 99.4 2.6E-12 9E-17 119.0 14.2 219 62-380 39-262 (263)
7 3dtn_A Putative methyltransfer 99.3 1.2E-10 4.1E-15 106.3 16.8 172 61-304 43-217 (234)
8 3bus_A REBM, methyltransferase 99.2 3.3E-10 1.1E-14 105.8 18.1 195 62-357 61-256 (273)
9 3hem_A Cyclopropane-fatty-acyl 99.2 1.2E-09 4E-14 104.2 19.2 215 63-375 73-300 (302)
10 3ujc_A Phosphoethanolamine N-m 99.1 5E-09 1.7E-13 96.7 21.4 152 62-301 55-206 (266)
11 2aot_A HMT, histamine N-methyl 99.1 3.3E-10 1.1E-14 107.8 11.6 159 62-299 52-219 (292)
12 3hnr_A Probable methyltransfer 99.1 2.5E-10 8.5E-15 103.1 8.9 161 62-305 45-205 (220)
13 2o57_A Putative sarcosine dime 99.1 3.1E-09 1.1E-13 100.6 16.7 149 62-301 82-234 (297)
14 3f4k_A Putative methyltransfer 99.1 3.1E-09 1E-13 98.1 16.1 208 62-380 46-257 (257)
15 4gek_A TRNA (CMO5U34)-methyltr 99.0 1.7E-09 5.8E-14 102.1 13.0 162 63-296 71-240 (261)
16 3sm3_A SAM-dependent methyltra 99.0 2E-09 6.7E-14 97.5 12.6 176 62-304 30-210 (235)
17 3kkz_A Uncharacterized protein 99.0 1.2E-08 4E-13 95.3 16.7 153 61-302 45-197 (267)
18 1vl5_A Unknown conserved prote 99.0 2.7E-09 9.3E-14 99.1 12.1 154 62-304 37-193 (260)
19 1kpg_A CFA synthase;, cyclopro 99.0 1.1E-07 3.8E-12 89.4 23.3 154 62-301 64-228 (287)
20 3mgg_A Methyltransferase; NYSG 99.0 6.6E-09 2.3E-13 97.1 14.5 158 61-304 36-201 (276)
21 4htf_A S-adenosylmethionine-de 99.0 2.2E-09 7.4E-14 101.2 11.0 166 61-304 67-235 (285)
22 3ege_A Putative methyltransfer 99.0 7.8E-10 2.7E-14 103.3 7.4 150 62-307 34-184 (261)
23 3h2b_A SAM-dependent methyltra 99.0 3.9E-09 1.3E-13 94.1 11.5 143 63-303 42-184 (203)
24 3dli_A Methyltransferase; PSI- 99.0 5.5E-09 1.9E-13 96.0 12.6 143 62-302 41-185 (240)
25 3ou2_A SAM-dependent methyltra 98.9 1.8E-08 6E-13 90.2 14.9 158 63-302 47-206 (218)
26 4hg2_A Methyltransferase type 98.9 3.2E-09 1.1E-13 100.1 9.6 103 62-242 39-141 (257)
27 1xxl_A YCGJ protein; structura 98.9 9.2E-09 3.1E-13 94.6 12.4 157 62-304 21-177 (239)
28 3l8d_A Methyltransferase; stru 98.9 1.4E-08 4.7E-13 92.7 12.8 149 62-302 53-201 (242)
29 3g5l_A Putative S-adenosylmeth 98.9 6.6E-09 2.3E-13 95.9 10.6 165 62-301 44-216 (253)
30 3lcc_A Putative methyl chlorid 98.9 2.9E-08 9.9E-13 90.7 14.6 145 63-305 67-211 (235)
31 1nkv_A Hypothetical protein YJ 98.9 2.4E-08 8.1E-13 92.0 14.2 151 62-300 36-186 (256)
32 2fk8_A Methoxy mycolic acid sy 98.9 7.4E-07 2.5E-11 85.1 24.9 156 62-301 90-254 (318)
33 1xtp_A LMAJ004091AAA; SGPP, st 98.8 1.8E-08 6.3E-13 92.6 12.1 146 62-301 93-238 (254)
34 1pjz_A Thiopurine S-methyltran 98.8 1E-08 3.5E-13 92.5 9.7 156 46-303 9-178 (203)
35 3dlc_A Putative S-adenosyl-L-m 98.8 1.1E-08 3.8E-13 91.3 9.7 160 62-300 43-202 (219)
36 2p7i_A Hypothetical protein; p 98.8 3.3E-08 1.1E-12 89.8 12.7 153 63-302 43-200 (250)
37 3cc8_A Putative methyltransfer 98.8 2.9E-08 9.9E-13 89.2 12.1 154 62-304 32-188 (230)
38 3dh0_A SAM dependent methyltra 98.8 4E-08 1.4E-12 88.4 12.5 145 62-301 37-181 (219)
39 2a14_A Indolethylamine N-methy 98.8 1.2E-08 4.2E-13 95.6 9.4 97 145-302 139-239 (263)
40 2qe6_A Uncharacterized protein 98.8 8.3E-08 2.8E-12 91.0 15.1 157 63-307 78-249 (274)
41 3i53_A O-methyltransferase; CO 98.8 1.4E-07 4.9E-12 91.0 17.0 151 62-300 169-320 (332)
42 3g5t_A Trans-aconitate 3-methy 98.8 2E-08 6.8E-13 95.5 10.7 155 62-294 36-197 (299)
43 3bkx_A SAM-dependent methyltra 98.8 5.9E-07 2E-11 83.6 20.3 168 62-301 43-219 (275)
44 1ri5_A MRNA capping enzyme; me 98.8 1.7E-07 5.9E-12 87.9 16.5 160 62-302 64-251 (298)
45 3vc1_A Geranyl diphosphate 2-C 98.8 2E-08 6.9E-13 96.2 10.2 147 62-301 117-269 (312)
46 3lst_A CALO1 methyltransferase 98.8 4.1E-08 1.4E-12 95.8 12.4 153 61-300 183-335 (348)
47 3bgv_A MRNA CAP guanine-N7 met 98.8 1.5E-08 5E-13 97.1 8.7 167 62-301 34-232 (313)
48 3gwz_A MMCR; methyltransferase 98.7 1.9E-07 6.5E-12 91.9 16.3 155 61-300 201-355 (369)
49 3p9c_A Caffeic acid O-methyltr 98.7 1.6E-07 5.5E-12 92.5 15.7 151 62-301 201-353 (364)
50 2g72_A Phenylethanolamine N-me 98.7 3.8E-08 1.3E-12 93.0 10.7 90 154-304 170-259 (289)
51 3mcz_A O-methyltransferase; ad 98.7 1.5E-07 5.3E-12 91.3 15.3 154 63-297 180-335 (352)
52 3reo_A (ISO)eugenol O-methyltr 98.7 3.6E-07 1.2E-11 90.0 18.0 151 62-301 203-355 (368)
53 4a6d_A Hydroxyindole O-methylt 98.7 2E-07 6.7E-12 91.5 16.0 152 62-299 179-332 (353)
54 3e23_A Uncharacterized protein 98.7 1.3E-07 4.4E-12 84.7 13.2 141 62-302 43-183 (211)
55 3e8s_A Putative SAM dependent 98.7 6.4E-08 2.2E-12 86.8 11.0 148 62-300 52-208 (227)
56 3dp7_A SAM-dependent methyltra 98.7 1.6E-07 5.5E-12 92.2 14.7 158 62-299 179-340 (363)
57 2gb4_A Thiopurine S-methyltran 98.7 2.2E-07 7.5E-12 87.1 15.0 143 62-303 68-229 (252)
58 2ip2_A Probable phenazine-spec 98.7 7.3E-07 2.5E-11 85.9 18.1 152 64-300 169-321 (334)
59 1vlm_A SAM-dependent methyltra 98.7 3.9E-07 1.3E-11 82.4 14.8 98 147-301 91-188 (219)
60 2ex4_A Adrenal gland protein A 98.6 4.7E-08 1.6E-12 89.7 8.1 146 62-301 79-225 (241)
61 4e2x_A TCAB9; kijanose, tetron 98.6 4.6E-08 1.6E-12 97.4 7.5 147 62-302 107-254 (416)
62 4fsd_A Arsenic methyltransfera 98.6 2.8E-07 9.6E-12 91.2 13.0 117 62-240 83-207 (383)
63 1y8c_A S-adenosylmethionine-de 98.6 1.1E-07 3.7E-12 86.5 9.3 108 62-239 37-145 (246)
64 2r3s_A Uncharacterized protein 98.6 4.1E-07 1.4E-11 87.4 13.6 157 62-300 165-322 (335)
65 3bkw_A MLL3908 protein, S-aden 98.6 1.2E-07 4.3E-12 86.2 9.4 165 62-301 43-214 (243)
66 3pfg_A N-methyltransferase; N, 98.6 3.6E-07 1.2E-11 84.7 12.5 104 61-238 49-153 (263)
67 3jwg_A HEN1, methyltransferase 98.6 2.2E-07 7.4E-12 83.8 10.4 157 62-301 29-192 (219)
68 1qzz_A RDMB, aclacinomycin-10- 98.6 5.9E-07 2E-11 87.8 13.7 156 62-302 182-340 (374)
69 1x19_A CRTF-related protein; m 98.6 8E-07 2.7E-11 86.8 14.6 159 61-301 189-348 (359)
70 3jwh_A HEN1; methyltransferase 98.6 8.3E-07 2.8E-11 79.9 13.6 152 62-299 29-190 (217)
71 2vdw_A Vaccinia virus capping 98.6 3.6E-07 1.2E-11 87.9 11.9 171 62-302 48-247 (302)
72 3g2m_A PCZA361.24; SAM-depende 98.6 3.4E-07 1.2E-11 86.8 11.5 168 63-303 83-276 (299)
73 2gs9_A Hypothetical protein TT 98.6 6.8E-07 2.3E-11 79.9 12.7 135 62-291 36-171 (211)
74 2kw5_A SLR1183 protein; struct 98.5 1.8E-07 6.1E-12 83.1 8.7 144 65-305 32-175 (202)
75 2i62_A Nicotinamide N-methyltr 98.5 2.4E-07 8.2E-12 85.4 9.9 99 145-304 140-242 (265)
76 3giw_A Protein of unknown func 98.5 5.1E-07 1.7E-11 86.1 11.9 162 62-307 78-254 (277)
77 3ocj_A Putative exported prote 98.5 6.4E-07 2.2E-11 85.4 12.6 158 62-300 118-290 (305)
78 1fp1_D Isoliquiritigenin 2'-O- 98.5 1.3E-06 4.4E-11 85.9 14.6 148 61-300 208-359 (372)
79 2avn_A Ubiquinone/menaquinone 98.5 9.6E-08 3.3E-12 88.8 6.0 155 62-302 54-214 (260)
80 3bxo_A N,N-dimethyltransferase 98.5 1.2E-06 4.1E-11 79.4 13.0 104 62-239 40-144 (239)
81 1tw3_A COMT, carminomycin 4-O- 98.5 1.3E-06 4.5E-11 85.0 13.9 157 62-303 183-341 (360)
82 2zfu_A Nucleomethylin, cerebra 98.5 2.9E-07 1E-11 82.7 7.6 112 62-300 67-178 (215)
83 3gu3_A Methyltransferase; alph 98.4 1.8E-06 6.2E-11 81.4 13.2 156 61-300 21-189 (284)
84 1yzh_A TRNA (guanine-N(7)-)-me 98.4 1.4E-06 4.9E-11 78.5 11.0 164 63-299 42-211 (214)
85 3thr_A Glycine N-methyltransfe 98.4 7.3E-07 2.5E-11 83.9 9.3 112 62-238 57-177 (293)
86 1zg3_A Isoflavanone 4'-O-methy 98.4 1.5E-06 5.2E-11 84.8 11.9 147 62-300 193-346 (358)
87 3ofk_A Nodulation protein S; N 98.4 5.4E-07 1.9E-11 80.8 8.0 107 62-239 51-157 (216)
88 1fp2_A Isoflavone O-methyltran 98.4 4.7E-06 1.6E-10 81.1 15.1 149 62-300 188-340 (352)
89 3cgg_A SAM-dependent methyltra 98.4 3.1E-06 1.1E-10 73.7 12.4 127 62-299 46-173 (195)
90 3mq2_A 16S rRNA methyltransfer 98.4 1.3E-06 4.4E-11 78.7 10.2 159 62-303 27-186 (218)
91 3g07_A 7SK snRNA methylphospha 98.4 8E-07 2.7E-11 84.5 9.2 58 145-237 159-221 (292)
92 2ld4_A Anamorsin; methyltransf 98.4 2.6E-06 9E-11 74.1 11.7 70 155-296 60-130 (176)
93 3i9f_A Putative type 11 methyl 98.4 1.2E-06 4.1E-11 75.5 9.4 131 62-300 17-147 (170)
94 1ve3_A Hypothetical protein PH 98.4 3.5E-07 1.2E-11 82.3 5.9 107 63-239 39-145 (227)
95 4df3_A Fibrillarin-like rRNA/T 98.4 2.9E-06 1E-10 78.9 12.2 108 64-240 79-186 (233)
96 2p8j_A S-adenosylmethionine-de 98.3 1.7E-06 5.8E-11 76.9 9.5 154 62-299 23-181 (209)
97 3ggd_A SAM-dependent methyltra 98.3 6.7E-07 2.3E-11 81.9 6.9 158 62-302 56-220 (245)
98 3opn_A Putative hemolysin; str 98.3 1.1E-06 3.9E-11 81.3 8.2 65 219-301 120-184 (232)
99 3d2l_A SAM-dependent methyltra 98.3 4.6E-06 1.6E-10 75.7 11.4 106 63-239 34-140 (243)
100 2xvm_A Tellurite resistance pr 98.2 3.2E-06 1.1E-10 74.3 9.2 139 63-300 33-172 (199)
101 2fca_A TRNA (guanine-N(7)-)-me 98.2 2.8E-06 9.4E-11 77.1 7.4 111 63-237 39-154 (213)
102 2plw_A Ribosomal RNA methyltra 98.1 9.6E-06 3.3E-10 71.7 10.1 111 62-239 22-157 (201)
103 3dxy_A TRNA (guanine-N(7)-)-me 98.1 1.7E-06 5.7E-11 79.2 5.2 138 35-237 3-151 (218)
104 2pxx_A Uncharacterized protein 98.1 1.3E-05 4.5E-10 71.0 10.7 121 62-239 42-162 (215)
105 3hm2_A Precorrin-6Y C5,15-meth 98.1 1.1E-05 3.8E-10 69.6 8.5 100 62-239 25-130 (178)
106 1wzn_A SAM-dependent methyltra 98.1 2.4E-05 8.3E-10 71.6 11.2 118 44-238 26-147 (252)
107 3m70_A Tellurite resistance pr 98.0 3.6E-06 1.2E-10 79.0 5.5 136 62-299 120-258 (286)
108 3hp7_A Hemolysin, putative; st 98.0 2.3E-05 8E-10 75.1 11.2 156 48-301 73-232 (291)
109 3q87_B N6 adenine specific DNA 98.0 4.7E-05 1.6E-09 66.3 11.8 73 63-176 24-96 (170)
110 1ej0_A FTSJ; methyltransferase 98.0 1.3E-05 4.6E-10 68.1 8.0 111 62-240 22-140 (180)
111 3grz_A L11 mtase, ribosomal pr 98.0 1.5E-05 5.1E-10 70.9 7.6 122 62-300 60-184 (205)
112 3iv6_A Putative Zn-dependent a 97.9 2.3E-05 7.9E-10 74.0 9.0 100 62-237 45-149 (261)
113 1dus_A MJ0882; hypothetical pr 97.9 9.7E-05 3.3E-09 64.0 12.2 109 62-239 52-160 (194)
114 3dmg_A Probable ribosomal RNA 97.9 3.2E-05 1.1E-09 76.7 10.2 107 62-238 233-342 (381)
115 3p2e_A 16S rRNA methylase; met 97.9 2.1E-05 7.2E-10 72.1 7.4 70 216-304 119-188 (225)
116 1zx0_A Guanidinoacetate N-meth 97.9 1.9E-05 6.4E-10 72.1 7.0 109 62-237 60-171 (236)
117 3m33_A Uncharacterized protein 97.8 6.1E-05 2.1E-09 68.3 9.8 69 62-165 48-118 (226)
118 2nyu_A Putative ribosomal RNA 97.8 5.3E-05 1.8E-09 66.5 8.6 119 62-239 22-148 (196)
119 3q7e_A Protein arginine N-meth 97.8 2.6E-05 8.9E-10 76.2 7.3 106 63-235 67-172 (349)
120 1p91_A Ribosomal RNA large sub 97.8 7.2E-05 2.5E-09 69.3 9.9 98 62-240 85-182 (269)
121 3mti_A RRNA methylase; SAM-dep 97.8 6.4E-05 2.2E-09 65.5 8.5 111 62-238 22-137 (185)
122 4dcm_A Ribosomal RNA large sub 97.8 2.3E-05 7.9E-10 77.6 6.1 111 63-238 223-336 (375)
123 3r0q_C Probable protein argini 97.7 5.9E-05 2E-09 74.5 8.3 108 62-237 63-170 (376)
124 3ckk_A TRNA (guanine-N(7)-)-me 97.7 8.1E-05 2.8E-09 68.7 8.7 120 62-237 46-169 (235)
125 1xdz_A Methyltransferase GIDB; 97.7 9.3E-05 3.2E-09 67.8 8.9 99 62-236 70-174 (240)
126 2pjd_A Ribosomal RNA small sub 97.7 1.4E-05 4.8E-10 77.8 3.3 106 63-238 197-305 (343)
127 1nt2_A Fibrillarin-like PRE-rR 97.7 7.5E-05 2.5E-09 67.6 7.9 33 63-110 58-90 (210)
128 3e05_A Precorrin-6Y C5,15-meth 97.7 1.8E-05 6.2E-10 70.4 3.5 102 62-238 40-144 (204)
129 3p9n_A Possible methyltransfer 97.7 8.6E-05 3E-09 65.2 7.7 107 62-240 44-157 (189)
130 1fbn_A MJ fibrillarin homologu 97.6 0.00019 6.6E-09 65.2 9.8 34 62-110 74-107 (230)
131 3lbf_A Protein-L-isoaspartate 97.6 3E-05 1E-09 69.0 4.1 76 62-171 77-156 (210)
132 1jsx_A Glucose-inhibited divis 97.6 6.3E-05 2.2E-09 66.7 6.0 98 63-237 66-166 (207)
133 2fyt_A Protein arginine N-meth 97.6 0.00014 4.9E-09 70.7 8.7 105 62-233 64-168 (340)
134 4hc4_A Protein arginine N-meth 97.6 0.00017 5.9E-09 71.5 9.3 137 28-234 50-187 (376)
135 3sso_A Methyltransferase; macr 97.6 0.00013 4.6E-09 72.9 8.1 121 61-259 215-359 (419)
136 1af7_A Chemotaxis receptor met 97.6 0.00013 4.3E-09 69.3 7.6 49 147-234 201-250 (274)
137 3fzg_A 16S rRNA methylase; met 97.6 1.4E-05 4.7E-10 72.4 0.7 98 46-177 34-134 (200)
138 3eey_A Putative rRNA methylase 97.6 0.00014 4.9E-09 63.9 7.3 118 63-238 23-141 (197)
139 3id6_C Fibrillarin-like rRNA/T 97.6 1.5E-05 5.2E-10 74.0 0.9 61 29-110 50-110 (232)
140 1o9g_A RRNA methyltransferase; 97.5 0.00039 1.3E-08 63.9 10.1 36 62-110 51-86 (250)
141 2ozv_A Hypothetical protein AT 97.5 0.00021 7E-09 66.7 8.2 125 62-237 36-171 (260)
142 4dzr_A Protein-(glutamine-N5) 97.5 3.8E-05 1.3E-09 67.9 2.9 130 61-238 29-166 (215)
143 2nxc_A L11 mtase, ribosomal pr 97.5 9.9E-05 3.4E-09 68.6 5.8 121 62-300 120-243 (254)
144 3uwp_A Histone-lysine N-methyl 97.5 7.7E-05 2.6E-09 74.9 5.1 112 62-235 173-287 (438)
145 2b3t_A Protein methyltransfera 97.5 0.00022 7.6E-09 66.7 8.0 124 62-236 109-238 (276)
146 1jg1_A PIMT;, protein-L-isoasp 97.5 6.5E-05 2.2E-09 68.5 4.2 76 63-171 92-171 (235)
147 3orh_A Guanidinoacetate N-meth 97.5 0.00012 4E-09 67.3 5.9 22 214-235 148-169 (236)
148 2yxe_A Protein-L-isoaspartate 97.5 0.00012 4E-09 65.4 5.7 83 62-171 77-159 (215)
149 1vbf_A 231AA long hypothetical 97.5 0.0002 6.8E-09 64.6 7.0 78 62-171 70-147 (231)
150 3htx_A HEN1; HEN1, small RNA m 97.4 0.00085 2.9E-08 72.6 12.3 114 62-239 721-837 (950)
151 1g6q_1 HnRNP arginine N-methyl 97.4 0.00013 4.4E-09 70.6 5.5 105 63-234 39-143 (328)
152 3lpm_A Putative methyltransfer 97.4 0.00015 5.3E-09 67.2 5.8 124 62-237 49-177 (259)
153 3mb5_A SAM-dependent methyltra 97.4 0.00057 1.9E-08 62.6 9.5 76 62-164 93-168 (255)
154 2b25_A Hypothetical protein; s 97.4 0.00029 9.9E-09 67.9 7.7 165 63-302 106-282 (336)
155 1dl5_A Protein-L-isoaspartate 97.4 0.00027 9.4E-09 67.7 7.3 78 63-171 76-157 (317)
156 3bwc_A Spermidine synthase; SA 97.4 0.00037 1.3E-08 66.7 8.2 116 61-238 94-212 (304)
157 3evz_A Methyltransferase; NYSG 97.3 0.00033 1.1E-08 63.1 6.9 122 62-238 55-181 (230)
158 3gjy_A Spermidine synthase; AP 97.3 0.00051 1.7E-08 66.6 8.5 113 61-239 88-203 (317)
159 1yb2_A Hypothetical protein TA 97.3 0.00075 2.6E-08 63.1 9.0 100 63-237 111-212 (275)
160 3fpf_A Mtnas, putative unchara 97.3 0.00098 3.4E-08 64.0 9.8 99 61-236 121-222 (298)
161 1r18_A Protein-L-isoaspartate( 97.3 0.0004 1.4E-08 62.8 6.8 85 63-170 85-175 (227)
162 1i9g_A Hypothetical protein RV 97.3 0.0022 7.7E-08 59.4 12.0 106 63-238 100-205 (280)
163 1sqg_A SUN protein, FMU protei 97.3 0.00097 3.3E-08 66.8 10.1 127 63-240 247-378 (429)
164 2h00_A Methyltransferase 10 do 97.2 0.00091 3.1E-08 61.4 9.0 34 62-110 65-98 (254)
165 2pbf_A Protein-L-isoaspartate 97.2 0.0005 1.7E-08 61.9 6.8 87 63-170 81-174 (227)
166 3dou_A Ribosomal RNA large sub 97.2 0.0028 9.5E-08 56.3 11.6 26 214-239 117-142 (191)
167 3bzb_A Uncharacterized protein 97.2 0.00036 1.2E-08 65.8 6.0 32 63-110 80-111 (281)
168 3g89_A Ribosomal RNA small sub 97.2 0.00032 1.1E-08 65.2 5.3 34 62-110 80-113 (249)
169 1ixk_A Methyltransferase; open 97.2 0.0012 4.2E-08 63.3 9.6 129 63-240 119-250 (315)
170 1u2z_A Histone-lysine N-methyl 97.2 0.00027 9.3E-09 71.3 5.1 34 62-110 242-275 (433)
171 1l3i_A Precorrin-6Y methyltran 97.2 0.00036 1.2E-08 60.1 5.2 21 218-238 116-136 (192)
172 1uir_A Polyamine aminopropyltr 97.2 0.00044 1.5E-08 66.5 6.0 119 61-239 76-198 (314)
173 2ipx_A RRNA 2'-O-methyltransfe 97.2 0.00094 3.2E-08 60.5 7.9 34 63-110 78-111 (233)
174 1o54_A SAM-dependent O-methylt 97.1 0.00085 2.9E-08 62.6 7.8 75 63-164 113-187 (277)
175 2xyq_A Putative 2'-O-methyl tr 97.1 0.0021 7.1E-08 61.4 10.5 24 216-239 151-174 (290)
176 3gdh_A Trimethylguanosine synt 97.1 8E-05 2.7E-09 67.8 0.6 82 62-176 78-162 (241)
177 1ws6_A Methyltransferase; stru 97.1 0.0009 3.1E-08 56.8 7.2 19 62-80 41-59 (171)
178 3adn_A Spermidine synthase; am 97.1 0.0019 6.6E-08 61.6 9.9 117 61-239 82-201 (294)
179 2esr_A Methyltransferase; stru 97.1 0.00065 2.2E-08 58.6 6.0 33 62-110 31-63 (177)
180 1i1n_A Protein-L-isoaspartate 97.1 0.0014 4.9E-08 58.7 8.5 35 62-110 77-111 (226)
181 2pwy_A TRNA (adenine-N(1)-)-me 97.1 0.0011 3.6E-08 60.6 7.8 103 63-237 97-199 (258)
182 2frn_A Hypothetical protein PH 97.1 0.0015 5.2E-08 61.4 8.9 99 63-239 126-228 (278)
183 2bm8_A Cephalosporin hydroxyla 97.0 0.0012 4.2E-08 60.6 7.7 38 63-111 82-119 (236)
184 2p41_A Type II methyltransfera 97.0 0.00065 2.2E-08 65.3 5.9 22 218-239 173-194 (305)
185 1g8a_A Fibrillarin-like PRE-rR 97.0 0.0068 2.3E-07 54.4 12.0 34 63-110 74-107 (227)
186 2y1w_A Histone-arginine methyl 97.0 0.0034 1.2E-07 61.0 10.7 78 62-169 50-127 (348)
187 2ift_A Putative methylase HI07 97.0 0.00063 2.1E-08 60.7 4.8 32 63-110 54-85 (201)
188 2gpy_A O-methyltransferase; st 96.9 0.0013 4.3E-08 59.6 6.6 33 63-110 55-87 (233)
189 3tfw_A Putative O-methyltransf 96.9 0.00085 2.9E-08 61.9 5.3 35 62-110 63-97 (248)
190 3ntv_A MW1564 protein; rossman 96.9 0.0011 3.8E-08 60.3 6.1 34 62-110 71-104 (232)
191 3njr_A Precorrin-6Y methylase; 96.9 0.0021 7.1E-08 57.5 7.7 32 62-110 55-86 (204)
192 3lcv_B Sisomicin-gentamicin re 96.9 0.0011 3.9E-08 62.6 6.0 119 61-214 131-258 (281)
193 2yxd_A Probable cobalt-precorr 96.9 0.001 3.4E-08 57.0 5.3 72 62-167 35-109 (183)
194 2oxt_A Nucleoside-2'-O-methylt 96.9 0.0048 1.6E-07 57.9 10.3 21 218-238 165-187 (265)
195 2vdv_E TRNA (guanine-N(7)-)-me 96.8 0.0015 5.3E-08 59.8 6.3 34 62-110 49-82 (246)
196 2yxl_A PH0851 protein, 450AA l 96.8 0.0033 1.1E-07 63.3 9.3 130 63-241 260-394 (450)
197 2wa2_A Non-structural protein 96.8 0.0073 2.5E-07 57.0 11.0 111 63-238 83-195 (276)
198 2fpo_A Methylase YHHF; structu 96.8 0.0025 8.5E-08 56.8 7.2 32 63-110 55-86 (202)
199 2pt6_A Spermidine synthase; tr 96.7 0.0031 1.1E-07 60.8 8.0 35 61-110 115-149 (321)
200 2o07_A Spermidine synthase; st 96.7 0.0022 7.4E-08 61.5 6.6 116 61-238 94-211 (304)
201 2fhp_A Methylase, putative; al 96.7 0.00052 1.8E-08 59.3 1.9 33 62-110 44-76 (187)
202 3dr5_A Putative O-methyltransf 96.7 0.00085 2.9E-08 61.1 3.4 33 64-110 58-90 (221)
203 2frx_A Hypothetical protein YE 96.7 0.0032 1.1E-07 64.2 8.1 129 63-240 118-250 (479)
204 1mjf_A Spermidine synthase; sp 96.7 0.0043 1.5E-07 58.5 8.2 22 217-238 174-195 (281)
205 3frh_A 16S rRNA methylase; met 96.6 0.0016 5.4E-08 60.9 5.0 80 61-176 104-186 (253)
206 3r3h_A O-methyltransferase, SA 96.6 0.0019 6.4E-08 59.6 5.4 36 62-111 60-95 (242)
207 3ajd_A Putative methyltransfer 96.6 0.001 3.5E-08 62.4 3.7 125 63-240 84-215 (274)
208 1inl_A Spermidine synthase; be 96.6 0.0021 7.2E-08 61.2 5.8 35 61-110 89-123 (296)
209 3u81_A Catechol O-methyltransf 96.6 0.00074 2.5E-08 60.8 2.5 35 62-110 58-92 (221)
210 3tma_A Methyltransferase; thum 96.6 0.0052 1.8E-07 59.6 8.5 112 63-237 204-318 (354)
211 1xj5_A Spermidine synthase 1; 96.6 0.0016 5.5E-08 63.3 4.8 114 61-236 119-235 (334)
212 1wxx_A TT1595, hypothetical pr 96.6 0.0047 1.6E-07 60.7 8.2 113 63-240 210-329 (382)
213 2hnk_A SAM-dependent O-methylt 96.6 0.0047 1.6E-07 56.1 7.6 20 63-82 61-80 (239)
214 1iy9_A Spermidine synthase; ro 96.6 0.0064 2.2E-07 57.2 8.6 116 61-238 74-191 (275)
215 2i7c_A Spermidine synthase; tr 96.5 0.0033 1.1E-07 59.4 6.4 35 61-110 77-111 (283)
216 3m6w_A RRNA methylase; rRNA me 96.5 0.0033 1.1E-07 63.9 6.7 128 63-240 102-233 (464)
217 2yvl_A TRMI protein, hypotheti 96.4 0.018 6.1E-07 52.0 10.3 73 63-164 92-164 (248)
218 3tr6_A O-methyltransferase; ce 96.4 0.00087 3E-08 60.1 1.2 34 63-110 65-98 (225)
219 3duw_A OMT, O-methyltransferas 96.3 0.0006 2.1E-08 61.1 0.1 35 62-110 58-92 (223)
220 2igt_A SAM dependent methyltra 96.3 0.0071 2.4E-07 58.6 7.3 29 212-240 248-276 (332)
221 3b3j_A Histone-arginine methyl 96.3 0.0072 2.5E-07 61.6 7.6 77 62-168 158-234 (480)
222 2b2c_A Spermidine synthase; be 96.2 0.0068 2.3E-07 58.3 6.9 35 61-110 107-141 (314)
223 2f8l_A Hypothetical protein LM 96.2 0.02 6.9E-07 55.2 9.9 128 62-238 130-258 (344)
224 3a27_A TYW2, uncharacterized p 96.1 0.0092 3.1E-07 55.8 6.9 33 62-109 119-151 (272)
225 4dmg_A Putative uncharacterize 96.1 0.0099 3.4E-07 59.0 7.5 47 209-255 299-345 (393)
226 1sui_A Caffeoyl-COA O-methyltr 95.9 0.0056 1.9E-07 56.5 4.4 35 62-110 79-113 (247)
227 3c3p_A Methyltransferase; NP_9 95.9 0.0027 9.2E-08 56.4 2.1 35 62-110 56-90 (210)
228 2ih2_A Modification methylase 95.8 0.05 1.7E-06 53.3 11.0 121 63-238 40-166 (421)
229 3m4x_A NOL1/NOP2/SUN family pr 95.8 0.0065 2.2E-07 61.6 4.5 129 63-241 106-239 (456)
230 1nv8_A HEMK protein; class I a 95.7 0.024 8.1E-07 53.5 7.8 32 63-110 124-155 (284)
231 3c3y_A Pfomt, O-methyltransfer 95.5 0.0051 1.7E-07 56.3 2.3 34 62-109 70-103 (237)
232 3gnl_A Uncharacterized protein 95.5 0.029 1E-06 52.2 7.5 102 62-236 21-125 (244)
233 2as0_A Hypothetical protein PH 95.4 0.028 9.4E-07 55.4 7.3 31 210-240 309-339 (396)
234 1zq9_A Probable dimethyladenos 95.3 0.01 3.5E-07 56.0 3.7 81 62-175 28-110 (285)
235 3kr9_A SAM-dependent methyltra 95.2 0.059 2E-06 49.4 8.6 34 62-110 15-48 (225)
236 2cmg_A Spermidine synthase; tr 95.2 0.085 2.9E-06 49.2 9.8 20 218-237 153-172 (262)
237 3lec_A NADB-rossmann superfami 95.1 0.051 1.7E-06 50.1 7.8 102 62-236 21-125 (230)
238 2avd_A Catechol-O-methyltransf 95.1 0.0081 2.8E-07 53.8 2.3 35 62-110 69-103 (229)
239 1ne2_A Hypothetical protein TA 95.0 0.055 1.9E-06 47.3 7.4 75 62-173 51-125 (200)
240 2b78_A Hypothetical protein SM 94.9 0.025 8.5E-07 55.8 5.2 29 212-240 307-335 (385)
241 3cbg_A O-methyltransferase; cy 94.8 0.013 4.5E-07 53.1 2.9 34 63-110 73-106 (232)
242 3khk_A Type I restriction-modi 94.8 0.18 6.1E-06 52.1 11.7 145 61-237 243-396 (544)
243 3evf_A RNA-directed RNA polyme 94.8 0.093 3.2E-06 49.6 8.6 21 219-239 166-187 (277)
244 4gqb_A Protein arginine N-meth 94.7 0.048 1.6E-06 57.4 7.3 108 62-233 357-464 (637)
245 3gru_A Dimethyladenosine trans 94.6 0.015 5.3E-07 55.5 3.0 77 63-172 51-128 (295)
246 3v97_A Ribosomal RNA large sub 94.5 0.058 2E-06 57.5 7.4 30 211-240 632-661 (703)
247 2okc_A Type I restriction enzy 94.5 0.12 4.1E-06 51.7 9.2 21 217-237 288-308 (445)
248 3tqs_A Ribosomal RNA small sub 94.2 0.033 1.1E-06 52.0 4.2 20 63-82 30-49 (255)
249 3tm4_A TRNA (guanine N2-)-meth 94.1 0.032 1.1E-06 54.6 3.9 74 62-165 217-293 (373)
250 2h1r_A Dimethyladenosine trans 93.9 0.041 1.4E-06 52.2 4.2 106 23-173 13-121 (299)
251 3s1s_A Restriction endonucleas 93.6 0.63 2.1E-05 50.3 13.0 24 215-238 444-467 (878)
252 3ua3_A Protein arginine N-meth 93.6 0.084 2.9E-06 56.1 6.2 46 62-109 409-454 (745)
253 2qm3_A Predicted methyltransfe 93.6 0.19 6.5E-06 49.0 8.4 102 63-238 173-280 (373)
254 4azs_A Methyltransferase WBDD; 93.5 0.062 2.1E-06 55.6 5.0 80 61-173 65-149 (569)
255 3lkd_A Type I restriction-modi 93.3 0.33 1.1E-05 50.1 10.1 133 62-238 221-360 (542)
256 3gcz_A Polyprotein; flavivirus 93.2 0.34 1.2E-05 45.8 9.1 20 219-238 182-203 (282)
257 3c0k_A UPF0064 protein YCCW; P 93.1 0.12 4.2E-06 50.7 6.3 27 214-240 317-343 (396)
258 3k6r_A Putative transferase PH 92.9 0.3 1E-05 46.0 8.4 31 63-109 126-156 (278)
259 1qam_A ERMC' methyltransferase 92.5 0.016 5.3E-07 53.4 -1.1 44 28-81 6-49 (244)
260 3fut_A Dimethyladenosine trans 92.2 0.031 1.1E-06 52.6 0.5 53 19-82 14-66 (271)
261 2jjq_A Uncharacterized RNA met 92.2 0.28 9.4E-06 49.0 7.5 32 62-110 290-321 (425)
262 2yx1_A Hypothetical protein MJ 91.8 0.13 4.5E-06 49.5 4.5 23 218-240 273-295 (336)
263 3uzu_A Ribosomal RNA small sub 91.4 0.04 1.4E-06 52.1 0.3 21 63-83 43-63 (279)
264 1yub_A Ermam, rRNA methyltrans 90.5 0.03 1E-06 51.2 -1.5 20 62-81 29-48 (245)
265 3ftd_A Dimethyladenosine trans 89.3 0.039 1.3E-06 51.1 -1.7 18 63-80 32-49 (249)
266 3eld_A Methyltransferase; flav 89.2 2 6.7E-05 41.0 9.9 22 61-82 80-101 (300)
267 1m6y_A S-adenosyl-methyltransf 87.1 0.33 1.1E-05 46.3 3.1 21 63-83 27-47 (301)
268 1qyr_A KSGA, high level kasuga 86.9 0.55 1.9E-05 43.4 4.4 16 63-78 22-37 (252)
269 1wy7_A Hypothetical protein PH 86.3 0.51 1.7E-05 41.0 3.8 78 62-172 49-126 (207)
270 2b9e_A NOL1/NOP2/SUN domain fa 86.3 1.5 5.1E-05 41.7 7.3 34 63-110 103-136 (309)
271 2ar0_A M.ecoki, type I restric 85.9 1.2 4.2E-05 45.7 7.0 21 217-237 293-313 (541)
272 3k0b_A Predicted N6-adenine-sp 85.1 3.2 0.00011 40.8 9.2 20 63-82 202-221 (393)
273 3ldu_A Putative methylase; str 84.6 4 0.00014 39.9 9.7 21 63-83 196-216 (385)
274 4auk_A Ribosomal RNA large sub 83.2 1.7 5.8E-05 42.7 6.2 88 45-169 189-281 (375)
275 3ldg_A Putative uncharacterize 82.3 7.8 0.00027 37.9 10.6 20 63-82 195-214 (384)
276 3r24_A NSP16, 2'-O-methyl tran 82.0 1.4 4.7E-05 42.3 4.8 64 61-167 108-178 (344)
277 2k4m_A TR8_protein, UPF0146 pr 81.9 0.93 3.2E-05 39.0 3.3 32 62-109 35-67 (153)
278 2qy6_A UPF0209 protein YFCK; s 78.6 0.85 2.9E-05 42.3 2.1 24 61-84 59-82 (257)
279 2zig_A TTHA0409, putative modi 78.1 3.7 0.00013 38.4 6.5 27 211-237 72-98 (297)
280 1uwv_A 23S rRNA (uracil-5-)-me 76.7 1.5 5.2E-05 43.5 3.5 31 63-110 287-317 (433)
281 2dul_A N(2),N(2)-dimethylguano 74.4 1.3 4.4E-05 43.4 2.3 33 63-110 48-80 (378)
282 2r6z_A UPF0341 protein in RSP 72.3 1.1 3.8E-05 41.4 1.1 18 63-80 84-101 (258)
283 3v97_A Ribosomal RNA large sub 71.7 21 0.00073 37.6 11.0 20 63-82 191-210 (703)
284 3bt7_A TRNA (uracil-5-)-methyl 66.2 3.6 0.00012 39.7 3.4 17 64-80 215-231 (369)
285 3axs_A Probable N(2),N(2)-dime 56.8 12 0.00042 36.7 5.3 65 24-110 22-86 (392)
286 3ll7_A Putative methyltransfer 56.4 3.3 0.00011 41.1 1.1 18 63-80 94-111 (410)
287 3lkz_A Non-structural protein 53.4 7.3 0.00025 37.2 2.9 35 63-112 95-129 (321)
288 2oyr_A UPF0341 protein YHIQ; a 53.1 4.4 0.00015 37.5 1.3 19 64-82 90-108 (258)
289 3p8z_A Mtase, non-structural p 52.3 9.7 0.00033 35.3 3.4 34 63-111 79-112 (267)
290 3vyw_A MNMC2; tRNA wobble urid 46.1 11 0.00038 35.9 2.9 24 61-84 95-118 (308)
291 2zig_A TTHA0409, putative modi 42.0 15 0.00052 34.0 3.2 18 63-80 236-253 (297)
292 2qfm_A Spermine synthase; sper 38.0 11 0.00037 36.8 1.4 20 61-80 187-206 (364)
293 2lmc_A Bacterial RNA polymeras 35.9 29 0.00099 26.2 3.1 30 269-299 45-78 (84)
294 4fzv_A Putative methyltransfer 35.4 45 0.0015 32.2 5.5 26 217-242 265-290 (359)
295 2vz8_A Fatty acid synthase; tr 31.0 63 0.0022 39.2 6.7 39 63-111 1241-1279(2512)
296 2px2_A Genome polyprotein [con 30.6 18 0.00063 33.7 1.6 18 63-80 74-91 (269)
297 3pvc_A TRNA 5-methylaminomethy 30.5 21 0.0007 37.3 2.2 23 62-84 58-80 (689)
298 1wg8_A Predicted S-adenosylmet 28.6 29 0.00098 32.7 2.6 21 63-83 23-43 (285)
299 3ps9_A TRNA 5-methylaminomethy 23.1 34 0.0012 35.5 2.2 24 61-84 65-88 (676)
300 1q1h_A TFE, transcription fact 23.1 36 0.0012 26.2 1.9 41 249-289 49-93 (110)
301 2wk1_A NOVP; transferase, O-me 20.1 83 0.0028 29.2 4.0 53 219-279 227-280 (282)
No 1
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=1e-97 Score=744.23 Aligned_cols=363 Identities=43% Similarity=0.756 Sum_probs=314.9
Q ss_pred ccceeeeccCCCCCcchHHHhcHHHHHHHHHhhHHHHHHHHhhhccCCCC---ceEEEeecCCCCccchHHHHHHHHHHH
Q 044727 13 MQVEQVLFMNGGEGDNSYANNSAPSREATLKTKPLLHESLFDLYCNGFPD---CIRFTDMGCSSGPNAFLPTLQVIEALD 89 (380)
Q Consensus 13 ~~~~~~l~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~---~~~IaD~GCs~G~Ns~~~~~~ii~~i~ 89 (380)
|+++++|||+||+|++||++||. |++++..++|++++||.+++....++ +++|||||||+|+||+++++.||++|+
T Consensus 1 m~~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~ 79 (384)
T 2efj_A 1 MELQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSID 79 (384)
T ss_dssp --CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHT
T ss_pred CCcccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHH
Confidence 78999999999999999999999 99999999999999999998765566 899999999999999999999999999
Q ss_pred HHhhh--cCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcceeeccCCCcccCCCCCCccceEEcccc
Q 044727 90 TICSR--LKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFC 167 (380)
Q Consensus 90 ~~~~~--~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~a 167 (380)
++|.+ .+.++|++||+|||||+||||+||++||.+.+++.+..| ..+++||++|||||||+||||++|+|++||++|
T Consensus 80 ~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g-~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~a 158 (384)
T 2efj_A 80 KVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG-RKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYC 158 (384)
T ss_dssp CC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC-CCTTSEEEEECCSCTTSCCSCTTCEEEEEEESC
T ss_pred HHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc-CCCCceEEEecchhhhhccCCCCceEEEEecce
Confidence 98865 455678999999999999999999999999888866666 446789999999999999999999999999999
Q ss_pred cccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccCCCc--chh
Q 044727 168 LHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKY--HTG 245 (380)
Q Consensus 168 lhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~--~~~ 245 (380)
|||||++|..+.++.+ ++||||+||++.++ ||+|.++|++||++||+.||++|++||+|||+|+++++|+++. ...
T Consensus 159 LHWls~~p~~l~~~~s-~~~nkg~i~i~~~s-p~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~ 236 (384)
T 2efj_A 159 LHWLSQVPSGLVTELG-ISVNKGCIYSSKAS-RPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPN 236 (384)
T ss_dssp TTBCSSSCCC-------CCCCTTCSSSCTTS-CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCC
T ss_pred eeecCCCchhhhcccc-ccccCCceEecCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcc
Confidence 9999999999998765 99999999999999 9999999999999999999999999999999999999999843 211
Q ss_pred HHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEEeecCCcCc---cCCcc-cch----
Q 044727 246 VFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETSHISWSVGY---ENNNK-GLE---- 317 (380)
Q Consensus 246 ~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~~~~~~~~---~~~~~-~~d---- 317 (380)
..+.+.++|++||.||+|+++++|+|++|+|+||++||+++|+++|+|+|+++|+++.+|++ + +++.. ..|
T Consensus 237 ~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~-~~~~~~~~~~~~~~~~~ 315 (384)
T 2efj_A 237 SMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDA-GFSIDDDYQGRSHSPVS 315 (384)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTT-TCCC---------CCSH
T ss_pred cHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccc-ccccccccccccccccc
Confidence 22489999999999999999999999999999999999999999999999999999999987 4 32100 011
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHhhChhHHHHHHHHHHHHHHHHHHhccCCEEEEEEEEEeC
Q 044727 318 LNAHARAKNVADNIRAVSESLLANHFGSAIMDDLFHRFTIKISAHLEMGLGAYTVLFIYLIKK 380 (380)
Q Consensus 318 ~~~~~~a~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~v~~~l~~~~~~~~~~~~~l~r~ 380 (380)
.+....|+.+++++||++||+|.+|||++|+|+||+||+++++++++.++++|++++++|+||
T Consensus 316 ~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 316 CDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRSGKGFYDSVIISLAKK 378 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEEC
T ss_pred chHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEc
Confidence 025689999999999999999999999999999999999999999999999999999999997
No 2
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=3.8e-97 Score=734.78 Aligned_cols=347 Identities=41% Similarity=0.721 Sum_probs=321.9
Q ss_pred ccceeeeccCCCCCcchHHHhcHHHHHHHHHhhHHHHHHHHhhhccC-CCCceEEEeecCCCCccchHHHHHHHHHHHHH
Q 044727 13 MQVEQVLFMNGGEGDNSYANNSAPSREATLKTKPLLHESLFDLYCNG-FPDCIRFTDMGCSSGPNAFLPTLQVIEALDTI 91 (380)
Q Consensus 13 ~~~~~~l~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~-~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~ 91 (380)
|+++++|||+||+|++||++||.+|++++.+++|++++||.+++... .+++++|||||||+|+||+.+++.||++|+++
T Consensus 1 m~~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~ 80 (359)
T 1m6e_X 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCcccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999998765 67899999999999999999999999999999
Q ss_pred hhhcCC-CCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcceeeccCCCcccCCCCCCccceEEccccccc
Q 044727 92 CSRLKH-KPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHW 170 (380)
Q Consensus 92 ~~~~~~-~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhW 170 (380)
|.+.+. ++|++||+|||||+||||+||++|+.+.. .. ++||++|||||||+||||++|+|++||++||||
T Consensus 81 ~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~--------~~-~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHW 151 (359)
T 1m6e_X 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND--------VD-GVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMW 151 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS--------CT-TCEEEEEEESCSSSCCSCTTCBSCEEEESCTTB
T ss_pred HHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc--------cC-CCEEEEecchhhhhccCCCCceEEEEehhhhhh
Confidence 987776 67899999999999999999999998641 11 579999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccCCC---cch---
Q 044727 171 LSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDK---YHT--- 244 (380)
Q Consensus 171 ls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~---~~~--- 244 (380)
||++|+.+.+ |||+||++.++ ||+|.+||++||++||+.||++|++||+|||+|+++++|+++ .++
T Consensus 152 ls~~p~~l~~-------nkg~i~~~~~~-p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~ 223 (359)
T 1m6e_X 152 LSQVPIGIES-------NKGNIYMANTC-PQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECC 223 (359)
T ss_dssp CSSCCSCCCC-------CTTTTSSCSSS-CCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTS
T ss_pred cccCchhhhc-------cCCceEecCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchH
Confidence 9999998876 99999999999 999999999999999999999999999999999999999983 222
Q ss_pred hHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEEeecCCcCccCCcccch--hhHHH
Q 044727 245 GVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETSHISWSVGYENNNKGLE--LNAHA 322 (380)
Q Consensus 245 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~~~~~~~~~~~~~~~d--~~~~~ 322 (380)
.+|+.|.++|++||.||+|++|++|+|++|+|+||++||+++|+++|+|+|+++|+++.+|++ ++++ +| .+...
T Consensus 224 ~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~-~~~~---~d~~~~~~~ 299 (359)
T 1m6e_X 224 LIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSS-CTKD---GDGGGSVEE 299 (359)
T ss_dssp TTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTC-CSSC---TTCCSSTTT
T ss_pred HHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCc-ccch---hhhhhhhhH
Confidence 679999999999999999999999999999999999999999999999999999999999987 4432 11 11356
Q ss_pred HHHHHHHHHHHHhhHHHHHhhChhHHHHHHHHHHHHHHHHHHhccCCEEEEEEEEEeC
Q 044727 323 RAKNVADNIRAVSESLLANHFGSAIMDDLFHRFTIKISAHLEMGLGAYTVLFIYLIKK 380 (380)
Q Consensus 323 ~a~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~v~~~l~~~~~~~~~~~~~l~r~ 380 (380)
.|+.+++++||+++|+|.+|||++++|+||+||++++++++..++++|++++++|+||
T Consensus 300 ~g~~~a~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 300 EGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRK 357 (359)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBC
T ss_pred hHhHhhhhhhhhcchhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEeC
Confidence 8889999999999999999999999999999999999999999999999999999997
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=7.1e-94 Score=715.52 Aligned_cols=357 Identities=30% Similarity=0.485 Sum_probs=298.3
Q ss_pred ccceeeeccCCCCCcchHHHhcHHHHHHHHHhhHHHHHHHHhhhccC--CCCceEEEeecCCCCccchHHHHHHHHHHHH
Q 044727 13 MQVEQVLFMNGGEGDNSYANNSAPSREATLKTKPLLHESLFDLYCNG--FPDCIRFTDMGCSSGPNAFLPTLQVIEALDT 90 (380)
Q Consensus 13 ~~~~~~l~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~--~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~ 90 (380)
|+++++|||+||+|++||++||.+|++++..++|++++||+++.... .+++++|||||||+|+||+.+++.||++|++
T Consensus 1 m~~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~ 80 (374)
T 3b5i_A 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISK 80 (374)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999987754 4668999999999999999999999999999
Q ss_pred HhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCcceeeccCCCcccCCCCCCccceEEcccc
Q 044727 91 ICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFC 167 (380)
Q Consensus 91 ~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~a 167 (380)
+|.+.+.++|++||++||||+||||+||++|+.+.+++.+ .++ ...++||++|||||||+|+||++|+|++||++|
T Consensus 81 ~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~-~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~a 159 (374)
T 3b5i_A 81 RFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAA-DGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFS 159 (374)
T ss_dssp HHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC----CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred HHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccc-cCCCceEEEecChhhhcccCCCcceEEEEecce
Confidence 9988787789999999999999999999999987653321 111 123579999999999999999999999999999
Q ss_pred cccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccCCC---cc-
Q 044727 168 LHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDK---YH- 243 (380)
Q Consensus 168 lhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~---~~- 243 (380)
|||||++|+.+.++.+ ++||||+||+++++ || |.+||++||++||..||++|++||||||+|+++++|++. .+
T Consensus 160 LHWls~~p~~l~~~~~-~~~nkg~i~~~~~~-~~-v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~ 236 (374)
T 3b5i_A 160 LHWLSQVPESVTDRRS-AAYNRGRVFIHGAG-EK-TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQ 236 (374)
T ss_dssp TTBCSSCCGGGGCTTS-TTCCTTTSSSSSCC-HH-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCC
T ss_pred eeeeccCchhhhcccc-ccccCCceEeCCCC-HH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccc
Confidence 9999999999988764 99999999999997 66 999999999999999999999999999999999999973 22
Q ss_pred -h--hHH-HHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEEeecCCcCccCCcccchhh
Q 044727 244 -T--GVF-ELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETSHISWSVGYENNNKGLELN 319 (380)
Q Consensus 244 -~--~~~-~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~~~~~~~~~~~~~~~d~~ 319 (380)
+ .+| +.|.++|++|+.||+|+++++|+|++|+|+||++||+++|+++|+|+|+++|+++.+|++ +.+.. .|
T Consensus 237 ~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~-~~~~~--~~-- 311 (374)
T 3b5i_A 237 GGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPL-VVNEP--DD-- 311 (374)
T ss_dssp HHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCC-CCSST--TC--
T ss_pred cchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCc-ccccc--ch--
Confidence 1 677 899999999999999999999999999999999999999998888999999999999977 43321 23
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhChhHHHHHHHHHHHHHHHHHH--hccCC--EEEEEEEEE
Q 044727 320 AHARAKNVADNIRAVSESLLANHFGSAIMDDLFHRFTIKISAHLE--MGLGA--YTVLFIYLI 378 (380)
Q Consensus 320 ~~~~a~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~v~~~l~--~~~~~--~~~~~~~l~ 378 (380)
....|+.+++++||+++|+|.+|||++++|+||+||+++++++++ .++.+ +++++++|+
T Consensus 312 ~~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 312 ASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDVLVNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHHHTTCCCEEEEEEEEEC
T ss_pred hHHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHhhhccccceEEEEEEeC
Confidence 467999999999999999999999999999999999999999987 67777 888888885
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=3.6e-14 Score=133.99 Aligned_cols=235 Identities=16% Similarity=0.184 Sum_probs=140.9
Q ss_pred ccCCCCCcchHHHhcHHHHHHHHHhhHHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCC
Q 044727 20 FMNGGEGDNSYANNSAPSREATLKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKP 99 (380)
Q Consensus 20 ~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~ 99 (380)
.|...-....|+++...|......+...+. .....+|+|+|||+|..+..+..
T Consensus 25 ~~~~~w~a~~y~~~~~~~~~~~~~l~~~l~----------~~~~~~vLDiGcG~G~~~~~l~~----------------- 77 (279)
T 3ccf_A 25 TAKNFWDATLYQDKHSFVWQYGEDLLQLLN----------PQPGEFILDLGCGTGQLTEKIAQ----------------- 77 (279)
T ss_dssp ----------------CCSSSCCHHHHHHC----------CCTTCEEEEETCTTSHHHHHHHH-----------------
T ss_pred cchhhcCHHHHhhcchHHHHHHHHHHHHhC----------CCCCCEEEEecCCCCHHHHHHHh-----------------
Confidence 454422346788877776544433332221 12357999999999998887732
Q ss_pred CcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcceeeccCCCcccCCCCCCccceEEcccccccccCCCcccc
Q 044727 100 PILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELV 179 (380)
Q Consensus 100 p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~ 179 (380)
+..+|+..|+.. ......+... . +-.|. .+++.... +++++|++++..++||+.+.+
T Consensus 78 ~~~~v~gvD~s~-----------~~~~~a~~~~--~--~~~~~---~~d~~~~~-~~~~fD~v~~~~~l~~~~d~~---- 134 (279)
T 3ccf_A 78 SGAEVLGTDNAA-----------TMIEKARQNY--P--HLHFD---VADARNFR-VDKPLDAVFSNAMLHWVKEPE---- 134 (279)
T ss_dssp TTCEEEEEESCH-----------HHHHHHHHHC--T--TSCEE---ECCTTTCC-CSSCEEEEEEESCGGGCSCHH----
T ss_pred CCCeEEEEECCH-----------HHHHHHHhhC--C--CCEEE---ECChhhCC-cCCCcCEEEEcchhhhCcCHH----
Confidence 236888888742 1111111110 0 22343 35665433 368999999999999965321
Q ss_pred ccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHH
Q 044727 180 SECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVY 259 (380)
Q Consensus 180 ~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~ 259 (380)
.+|+.-++.|+|||++++.+.+.+... ...+.+...+...
T Consensus 135 -------------------------------------~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~-- 174 (279)
T 3ccf_A 135 -------------------------------------AAIASIHQALKSGGRFVAEFGGKGNIK-YILEALYNALETL-- 174 (279)
T ss_dssp -------------------------------------HHHHHHHHHEEEEEEEEEEEECTTTTH-HHHHHHHHHHHHH--
T ss_pred -------------------------------------HHHHHHHHhcCCCcEEEEEecCCcchH-HHHHHHHHHHHhc--
Confidence 236666899999999999998765433 3344444333332
Q ss_pred ccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEEeecCCcCccCCcccchhhHHHHHHHHHHHHHHHhhHHH
Q 044727 260 EGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETSHISWSVGYENNNKGLELNAHARAKNVADNIRAVSESLL 339 (380)
Q Consensus 260 eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~~~~~~~~~~~~~~~d~~~~~~a~~~a~~iRA~~ep~l 339 (380)
|.. ...+..|+++++.+++..++++.| |++..++.+..++.. ..+ .+.+..|++++..+++
T Consensus 175 -~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~--~~~-----------~~~~~~~l~~~~~~~~ 235 (279)
T 3ccf_A 175 -GIH----NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTL--AEG-----------EFGMANWIQMFASAFL 235 (279)
T ss_dssp -TCC----CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEEC--SSG-----------GGHHHHHHHHHCHHHH
T ss_pred -CCc----cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccc--cCC-----------HHHHHHHHHHhhHHHh
Confidence 321 234566888999999999999999 999998887655422 111 1235667777776666
Q ss_pred HHhhChhHHHHHHHHHHHHHHHHHH
Q 044727 340 ANHFGSAIMDDLFHRFTIKISAHLE 364 (380)
Q Consensus 340 ~~hfge~i~delf~r~~~~v~~~l~ 364 (380)
..++++..+++.+++.+.+.+...
T Consensus 236 -~~~~~~~~~~~~~~~~~~~~~~~~ 259 (279)
T 3ccf_A 236 -VGLTPDQQVQLIRKVEATLQDKLY 259 (279)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHHHHE
T ss_pred -ccCCHHHHHHHHHHHHHHHHhhcc
Confidence 567888888888888888876543
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=7.2e-14 Score=129.49 Aligned_cols=229 Identities=12% Similarity=0.128 Sum_probs=141.0
Q ss_pred cchHHHhcHHHHHHHHHhhHHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEe
Q 044727 27 DNSYANNSAPSREATLKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFL 106 (380)
Q Consensus 27 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~ 106 (380)
...|++.+..|......+. ..+. ...+.+|+|+|||+|..+..+.... |..+++.
T Consensus 8 ~~~y~~~~~~~~~~~~~l~-------~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~v~~ 62 (259)
T 2p35_A 8 AQQYLKFEDERTRPARDLL-------AQVP---LERVLNGYDLGCGPGNSTELLTDRY---------------GVNVITG 62 (259)
T ss_dssp CGGGBCCCCGGGHHHHHHH-------TTCC---CSCCSSEEEETCTTTHHHHHHHHHH---------------CTTSEEE
T ss_pred HHHHHHHHHHHHHHHHHHH-------HhcC---CCCCCEEEEecCcCCHHHHHHHHhC---------------CCCEEEE
Confidence 4779988888877664322 2121 1245799999999999988774432 4578888
Q ss_pred cCCCCCchhhhhccCcchHHHhhhhcCCCCCCcceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCC
Q 044727 107 NDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPL 186 (380)
Q Consensus 107 nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~ 186 (380)
.|+.. ......+.. . . +-.| +.+++.... |++++|+++|..++||+.+.
T Consensus 63 ~D~s~-----------~~~~~a~~~-~-~--~~~~---~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~------------ 111 (259)
T 2p35_A 63 IDSDD-----------DMLEKAADR-L-P--NTNF---GKADLATWK-PAQKADLLYANAVFQWVPDH------------ 111 (259)
T ss_dssp EESCH-----------HHHHHHHHH-S-T--TSEE---EECCTTTCC-CSSCEEEEEEESCGGGSTTH------------
T ss_pred EECCH-----------HHHHHHHHh-C-C--CcEE---EECChhhcC-ccCCcCEEEEeCchhhCCCH------------
Confidence 89743 111111111 1 1 2234 346775544 88999999999999997321
Q ss_pred CCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccc
Q 044727 187 LNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVS 266 (380)
Q Consensus 187 ~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e 266 (380)
..+|+.-.+.|+|||++++++++.... ..... +.++...+....
T Consensus 112 -----------------------------~~~l~~~~~~L~pgG~l~~~~~~~~~~--~~~~~----~~~~~~~~~~~~- 155 (259)
T 2p35_A 112 -----------------------------LAVLSQLMDQLESGGVLAVQMPDNLQE--PTHIA----MHETADGGPWKD- 155 (259)
T ss_dssp -----------------------------HHHHHHHGGGEEEEEEEEEEEECCTTS--HHHHH----HHHHHHHSTTGG-
T ss_pred -----------------------------HHHHHHHHHhcCCCeEEEEEeCCCCCc--HHHHH----HHHHhcCcchHH-
Confidence 123667789999999999999765321 11122 333333222222
Q ss_pred ccccc-ccCcccCCHHHHHHHHHhcCceeEeEEEEEeecCCcCccCCcccchhhHHHHHHHHHHHHHHHhh-HHHHHhhC
Q 044727 267 KLESF-HFPMYNPCVEEVRQVIEREGSFNIHQLETSHISWSVGYENNNKGLELNAHARAKNVADNIRAVSE-SLLANHFG 344 (380)
Q Consensus 267 ~~d~f-~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~~~~~~~~~~~~~~~d~~~~~~a~~~a~~iRA~~e-p~l~~hfg 344 (380)
..... ..+..+++.+++..++++.| |+|+..+..... + +.+ ...+..|+++... +++ ..++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~--~-~~~------------~~~~~~~l~~~~~~~~~-~~~~ 218 (259)
T 2p35_A 156 AFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNH--P-MKD------------ADSIVEWVKGTGLRPYL-AAAG 218 (259)
T ss_dssp GC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEE--E-ESC------------HHHHHHHHTTTTTTHHH-HTTC
T ss_pred HhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeee--c-cCC------------chHHhhhhhcCcchHHH-HhCC
Confidence 11221 33667789999999999999 987655542211 1 211 2336677776643 444 5788
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 044727 345 SAIMDDLFHRFTIKISAHLE 364 (380)
Q Consensus 345 e~i~delf~r~~~~v~~~l~ 364 (380)
++..+++.+++.+.+.+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~ 238 (259)
T 2p35_A 219 EENREAFLADYTRRIAAAYP 238 (259)
T ss_dssp GGGHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 88888888888888876653
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.40 E-value=2.6e-12 Score=118.97 Aligned_cols=219 Identities=13% Similarity=0.100 Sum_probs=131.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhc-CCCCCCcc
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTER-GHDDFGSC 140 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~-~~~~~~~~ 140 (380)
...+|+|+|||+|..+..+... ..+|+..|+.. ......+... + ...+-.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~~~-~~~~~~ 89 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR-----------------GYRYIALDADA-----------AMLEVFRQKIAG-VDRKVQ 89 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT-----------------TCEEEEEESCH-----------HHHHHHHHHTTT-SCTTEE
T ss_pred CCCEEEEeCCcCCHHHHHHHHC-----------------CCEEEEEECCH-----------HHHHHHHHHhhc-cCCceE
Confidence 4579999999999998877211 25788888742 1111111110 0 001123
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +.+++....+|++++|++++..++||+.+.+ .+|+
T Consensus 90 ~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------------------~~l~ 125 (263)
T 2yqz_A 90 V---VQADARAIPLPDESVHGVIVVHLWHLVPDWP-----------------------------------------KVLA 125 (263)
T ss_dssp E---EESCTTSCCSCTTCEEEEEEESCGGGCTTHH-----------------------------------------HHHH
T ss_pred E---EEcccccCCCCCCCeeEEEECCchhhcCCHH-----------------------------------------HHHH
Confidence 3 4477767678899999999999999975321 2366
Q ss_pred HHHHHhccCceEEEEeccCCCcch-hHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHT-GVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLE 299 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~-~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e 299 (380)
.-.+.|+|||++++.+...+.... ...+.+..++..+ |. . ...+.++++.+++...++..| |++...+
T Consensus 126 ~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~ 194 (263)
T 2yqz_A 126 EAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEE---GF-P------VERGLHAKRLKEVEEALRRLG-LKPRTRE 194 (263)
T ss_dssp HHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHH---TC-C------CCCCHHHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred HHHHHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHh---CC-C------cccccccCCHHHHHHHHHHcC-CCcceEE
Confidence 668899999999999443321110 1223333322221 21 1 122456778999999999999 9987766
Q ss_pred EEeecCCcCccCCcccchhhHHHHHHHHHHHHHHHhhHHHHHhhChhHHHHHHHHHHHHHHHHHHhccC---CEEEEEEE
Q 044727 300 TSHISWSVGYENNNKGLELNAHARAKNVADNIRAVSESLLANHFGSAIMDDLFHRFTIKISAHLEMGLG---AYTVLFIY 376 (380)
Q Consensus 300 ~~~~~~~~~~~~~~~~~d~~~~~~a~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~v~~~l~~~~~---~~~~~~~~ 376 (380)
..... . .. ..+.+..++++.+.+.+ .+++++..+++.+++.+.+.+....... -+..++++
T Consensus 195 ~~~~~--~--~~-----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 258 (263)
T 2yqz_A 195 VARWR--E--ER-----------TPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLR 258 (263)
T ss_dssp EEEEE--E--EE-----------CHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEE
T ss_pred Eeeee--c--CC-----------CHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCcCccccccceeEEE
Confidence 54322 2 00 11234556665555544 5677888888888888888776533221 23445555
Q ss_pred EEeC
Q 044727 377 LIKK 380 (380)
Q Consensus 377 l~r~ 380 (380)
.-||
T Consensus 259 ~~rk 262 (263)
T 2yqz_A 259 VSRL 262 (263)
T ss_dssp EEEC
T ss_pred eeec
Confidence 5554
No 7
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.27 E-value=1.2e-10 Score=106.31 Aligned_cols=172 Identities=13% Similarity=0.082 Sum_probs=112.1
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
..+.+|+|+|||+|..+..+.... |..+++..|+.. ......+.... ....-.
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~---------------~~~~v~~vD~s~-----------~~~~~a~~~~~-~~~~~~ 95 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKY---------------PEATFTLVDMSE-----------KMLEIAKNRFR-GNLKVK 95 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHC---------------TTCEEEEEESCH-----------HHHHHHHHHTC-SCTTEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC---------------CCCeEEEEECCH-----------HHHHHHHHhhc-cCCCEE
Confidence 346899999999999988773322 458899999843 11111111111 000123
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +.+++....++ +++|+++++.++||+.+ . +...+|+
T Consensus 96 ~---~~~d~~~~~~~-~~fD~v~~~~~l~~~~~---~------------------------------------~~~~~l~ 132 (234)
T 3dtn_A 96 Y---IEADYSKYDFE-EKYDMVVSALSIHHLED---E------------------------------------DKKELYK 132 (234)
T ss_dssp E---EESCTTTCCCC-SCEEEEEEESCGGGSCH---H------------------------------------HHHHHHH
T ss_pred E---EeCchhccCCC-CCceEEEEeCccccCCH---H------------------------------------HHHHHHH
Confidence 3 45788666666 99999999999999632 1 1223477
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccc---cCcccCCHHHHHHHHHhcCceeEeE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFH---FPMYNPCVEEVRQVIEREGSFNIHQ 297 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~---~P~Y~ps~eE~~~~ie~~GsF~I~~ 297 (380)
.-.+.|+|||++++......+.. .........|.....+.-.+++++..+. --.+.++.+|+..++++.| |++.+
T Consensus 133 ~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~ 210 (234)
T 3dtn_A 133 RSYSILKESGIFINADLVHGETA-FIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVS 210 (234)
T ss_dssp HHHHHEEEEEEEEEEEECBCSSH-HHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEE
T ss_pred HHHHhcCCCcEEEEEEecCCCCh-hhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCcee
Confidence 77899999999999988765433 2334445556666666555655443321 2345579999999999999 99887
Q ss_pred EEEEeec
Q 044727 298 LETSHIS 304 (380)
Q Consensus 298 ~e~~~~~ 304 (380)
+.....+
T Consensus 211 ~~~~~~~ 217 (234)
T 3dtn_A 211 CIYKYYQ 217 (234)
T ss_dssp EEEEETT
T ss_pred eeeeecc
Confidence 7655433
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.24 E-value=3.3e-10 Score=105.77 Aligned_cols=195 Identities=11% Similarity=0.053 Sum_probs=116.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ...+|+..|+... .-... ..... ..+.. ..-.|
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~----------------~~~~v~gvD~s~~-~~~~a------~~~~~-~~~~~-~~~~~ 115 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATA----------------RDVRVTGISISRP-QVNQA------NARAT-AAGLA-NRVTF 115 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH----------------SCCEEEEEESCHH-HHHHH------HHHHH-HTTCT-TTEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHh----------------cCCEEEEEeCCHH-HHHHH------HHHHH-hcCCC-cceEE
Confidence 3579999999999998877332 1268888887420 00000 00011 11100 01233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|+++|..++||+.+. ..+|+.
T Consensus 116 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~~ 151 (273)
T 3bus_A 116 ---SYADAMDLPFEDASFDAVWALESLHHMPDR-----------------------------------------GRALRE 151 (273)
T ss_dssp ---EECCTTSCCSCTTCEEEEEEESCTTTSSCH-----------------------------------------HHHHHH
T ss_pred ---EECccccCCCCCCCccEEEEechhhhCCCH-----------------------------------------HHHHHH
Confidence 457887777899999999999999996432 123677
Q ss_pred HHHHhccCceEEEEeccCC-CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGND-KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~-~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-.+.|+|||++++..+... +... .. ...+..+.. .+ ...+.++.+++...+++.| |++..++.
T Consensus 152 ~~~~L~pgG~l~i~~~~~~~~~~~-~~---~~~~~~~~~----------~~-~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 215 (273)
T 3bus_A 152 MARVLRPGGTVAIADFVLLAPVEG-AK---KEAVDAFRA----------GG-GVLSLGGIDEYESDVRQAE-LVVTSTVD 215 (273)
T ss_dssp HHTTEEEEEEEEEEEEEESSCCCH-HH---HHHHHHHHH----------HH-TCCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred HHHHcCCCeEEEEEEeeccCCCCh-hH---HHHHHHHHh----------hc-CccCCCCHHHHHHHHHHcC-CeEEEEEE
Confidence 7899999999999988654 2221 11 111221110 11 1235689999999999999 99987776
Q ss_pred EeecCCcCccCCcccchhhHHHHHHHHHHHHHHHhhHHHHHhhChhHHHHHHHHHHH
Q 044727 301 SHISWSVGYENNNKGLELNAHARAKNVADNIRAVSESLLANHFGSAIMDDLFHRFTI 357 (380)
Q Consensus 301 ~~~~~~~~~~~~~~~~d~~~~~~a~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~ 357 (380)
+...+.. .+.. +...+++.... +...+|++..+.+.+.+..
T Consensus 216 ~~~~~~~--------------~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 216 ISAQARP--------------SLVK-TAEAFENARSQ-VEPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp CHHHHTT--------------HHHH-HHHHHHHTHHH-HHHHHCHHHHHHHHHHHHH
T ss_pred CcHhHHH--------------HHHH-HHHHHHHhHHH-HHhhcCHHHHHHHHHHHHH
Confidence 5433211 1111 22222333333 3466788777777666655
No 9
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.18 E-value=1.2e-09 Score=104.20 Aligned_cols=215 Identities=12% Similarity=0.097 Sum_probs=129.4
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhh---hhcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLK---TERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~---~~~~~~~~~~ 139 (380)
..+|+|+|||+|..++.+.... + .+|+..|+.. ......+ ...+.. ..-
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~---------------~-~~v~gvD~s~-----------~~~~~a~~~~~~~~~~-~~v 124 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEY---------------D-VNVIGLTLSE-----------NQYAHDKAMFDEVDSP-RRK 124 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEECCH-----------HHHHHHHHHHHHSCCS-SCE
T ss_pred cCEEEEeeccCcHHHHHHHHhC---------------C-CEEEEEECCH-----------HHHHHHHHHHHhcCCC-Cce
Confidence 4799999999999998874332 4 6788888842 1111111 111100 011
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
.| +.+++.. + ++++|+++|..++|++.+... ... .+++..+|
T Consensus 125 ~~---~~~d~~~-~--~~~fD~v~~~~~~~~~~d~~~-~~~-------------------------------~~~~~~~l 166 (302)
T 3hem_A 125 EV---RIQGWEE-F--DEPVDRIVSLGAFEHFADGAG-DAG-------------------------------FERYDTFF 166 (302)
T ss_dssp EE---EECCGGG-C--CCCCSEEEEESCGGGTTCCSS-CCC-------------------------------TTHHHHHH
T ss_pred EE---EECCHHH-c--CCCccEEEEcchHHhcCcccc-ccc-------------------------------hhHHHHHH
Confidence 23 3466643 3 899999999999999766321 000 02566778
Q ss_pred HHHHHHhccCceEEEEeccCCCcchhHHHHH-------HHHHHHHHHccCcccccccccccCc-ccCCHHHHHHHHHhcC
Q 044727 220 KFRSEELKTEGRMVLNFIGNDKYHTGVFELM-------GMVLNDMVYEGLIEVSKLESFHFPM-YNPCVEEVRQVIEREG 291 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l-------~~al~~mv~eG~i~~e~~d~f~~P~-Y~ps~eE~~~~ie~~G 291 (380)
+.-.+.|+|||++++..+....... .... ...+.+... .+.+|. +.|+++|+...+++.|
T Consensus 167 ~~~~~~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----------~~~~p~~~~~s~~~~~~~l~~aG 234 (302)
T 3hem_A 167 KKFYNLTPDDGRMLLHTITIPDKEE--AQELGLTSPMSLLRFIKFIL----------TEIFPGGRLPRISQVDYYSSNAG 234 (302)
T ss_dssp HHHHHSSCTTCEEEEEEEECCCHHH--HHHHTCCCCHHHHHHHHHHH----------HHTCTTCCCCCHHHHHHHHHHHT
T ss_pred HHHHHhcCCCcEEEEEEEeccCccc--hhhccccccccccchHHHHH----------HhcCCCCCCCCHHHHHHHHHhCC
Confidence 8889999999999999887652210 0000 000111111 123343 7789999999999999
Q ss_pred ceeEeEEEEEeecCCcCccCCcccchhhHHHHHHHHHHHHHHHhh--HHHHHhhChhHHHHHHHHHHHHHHHHHHhccCC
Q 044727 292 SFNIHQLETSHISWSVGYENNNKGLELNAHARAKNVADNIRAVSE--SLLANHFGSAIMDDLFHRFTIKISAHLEMGLGA 369 (380)
Q Consensus 292 sF~I~~~e~~~~~~~~~~~~~~~~~d~~~~~~a~~~a~~iRA~~e--p~l~~hfge~i~delf~r~~~~v~~~l~~~~~~ 369 (380)
|++..++.+... +++++..|.+.+-. +-+...++++..+ +++.|-...+.-.......
T Consensus 235 -f~~~~~~~~~~~------------------y~~tl~~w~~~~~~~~~~~~~~~~~~~~~-~w~~yl~~~~~~f~~~~~~ 294 (302)
T 3hem_A 235 -WKVERYHRIGAN------------------YVPTLNAWADALQAHKDEAIALKGQETCD-IYMHYLRGCSDLFRDKYTD 294 (302)
T ss_dssp -CEEEEEEECGGG------------------HHHHHHHHHHHHHHTHHHHHHHHCHHHHH-HHHHHHHHHHHHHHTTSSE
T ss_pred -cEEEEEEeCchh------------------HHHHHHHHHHHHHHhHHHHHHHhCHHHHH-HHHHHHHHHHHHHhCCCCe
Confidence 999888654322 33334444333322 3333557776654 5777777777677777777
Q ss_pred EEEEEE
Q 044727 370 YTVLFI 375 (380)
Q Consensus 370 ~~~~~~ 375 (380)
.+++.+
T Consensus 295 ~~q~~~ 300 (302)
T 3hem_A 295 VCQFTL 300 (302)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666543
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.15 E-value=5e-09 Score=96.72 Aligned_cols=152 Identities=13% Similarity=0.091 Sum_probs=98.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... ..+|+..|+.. ......+.... ....-.|
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~----------------~~~v~~vD~s~-----------~~~~~a~~~~~-~~~~~~~ 106 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY----------------GAHTHGIDICS-----------NIVNMANERVS-GNNKIIF 106 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH----------------CCEEEEEESCH-----------HHHHHHHHTCC-SCTTEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHc----------------CCEEEEEeCCH-----------HHHHHHHHHhh-cCCCeEE
Confidence 35799999999999988874332 26788888742 11111111110 1001233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|++++..++||++ . .|...+|+.
T Consensus 107 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~---~------------------------------------~~~~~~l~~ 144 (266)
T 3ujc_A 107 ---EANDILTKEFPENNFDLIYSRDAILALS---L------------------------------------ENKNKLFQK 144 (266)
T ss_dssp ---EECCTTTCCCCTTCEEEEEEESCGGGSC---H------------------------------------HHHHHHHHH
T ss_pred ---EECccccCCCCCCcEEEEeHHHHHHhcC---h------------------------------------HHHHHHHHH
Confidence 4477777778999999999999999962 1 134456788
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
-.+.|+|||++++..+....... ....+...+. . .....++.+++...+++.| |++...+.+
T Consensus 145 ~~~~L~pgG~l~~~~~~~~~~~~-~~~~~~~~~~----~------------~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 206 (266)
T 3ujc_A 145 CYKWLKPTGTLLITDYCATEKEN-WDDEFKEYVK----Q------------RKYTLITVEEYADILTACN-FKNVVSKDL 206 (266)
T ss_dssp HHHHEEEEEEEEEEEEEESCGGG-CCHHHHHHHH----H------------HTCCCCCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred HHHHcCCCCEEEEEEeccCCccc-chHHHHHHHh----c------------CCCCCCCHHHHHHHHHHcC-CeEEEEEeC
Confidence 89999999999999886553111 1111111111 1 1234678999999999999 998776644
No 11
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.11 E-value=3.3e-10 Score=107.77 Aligned_cols=159 Identities=11% Similarity=0.108 Sum_probs=92.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcc--eEEecCCCCCchhhhhccCcchHHHhhhhcCCC-CCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPIL--HAFLNDLPGNDFNTVSKSLPSFYERLKTERGHD-DFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~--~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~-~~~ 138 (380)
...+|+|+|||+|..|..++..+ ..++ |.. .++..|... .++ ...+...... ...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l----~~~~-------~~~~v~~~~vD~S~----------~ml-~~a~~~~~~~~~~~ 109 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKV----QAQY-------PGVCINNEVVEPSA----------EQI-AKYKELVAKTSNLE 109 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHH----HHHS-------TTCEEEEEEECSCH----------HHH-HHHHHHHHTCSSCT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHH----HhhC-------CCceeeEEEEeCCH----------HHH-HHHHHHHHhccCCC
Confidence 46899999999998777665554 2221 335 448888643 121 1111110000 112
Q ss_pred cceeeccCCCccc------CCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHG------RLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFE 212 (380)
Q Consensus 139 ~~f~~~vpgSFy~------~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~ 212 (380)
++-+.-..++... +.|+++++|+|+++.+|||+.+.+.
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~------------------------------------ 153 (292)
T 2aot_A 110 NVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPA------------------------------------ 153 (292)
T ss_dssp TEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHH------------------------------------
T ss_pred cceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHH------------------------------------
Confidence 2211112334322 1267899999999999999655322
Q ss_pred HHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCc
Q 044727 213 IDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGS 292 (380)
Q Consensus 213 ~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~Gs 292 (380)
+|+.-++.|||||++++.....+ . .|..+ +.+... .+ .. .-...+++++|+...+++.|
T Consensus 154 -----~l~~~~r~LkpgG~l~i~~~~~~--~--~~~~~---~~~~~~-~~-~~------~~~~~~~~~~~~~~~l~~aG- 212 (292)
T 2aot_A 154 -----TLKFFHSLLGTNAKMLIIVVSGS--S--GWDKL---WKKYGS-RF-PQ------DDLCQYITSDDLTQMLDNLG- 212 (292)
T ss_dssp -----HHHHHHHTEEEEEEEEEEEECTT--S--HHHHH---HHHHGG-GS-CC------CTTCCCCCHHHHHHHHHHHT-
T ss_pred -----HHHHHHHHcCCCcEEEEEEecCC--c--cHHHH---HHHHHH-hc-cC------CCcccCCCHHHHHHHHHHCC-
Confidence 26666899999999999976543 1 12221 222211 11 11 01245688999999999999
Q ss_pred eeEeEEE
Q 044727 293 FNIHQLE 299 (380)
Q Consensus 293 F~I~~~e 299 (380)
|++...+
T Consensus 213 f~~~~~~ 219 (292)
T 2aot_A 213 LKYECYD 219 (292)
T ss_dssp CCEEEEE
T ss_pred CceEEEE
Confidence 9887643
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.08 E-value=2.5e-10 Score=103.09 Aligned_cols=161 Identities=13% Similarity=0.148 Sum_probs=102.5
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ..+++..|+.. ......+... . .+-.|
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~--~-~~~~~ 93 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-----------------GRTVYGIEPSR-----------EMRMIAKEKL--P-KEFSI 93 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-----------------TCEEEEECSCH-----------HHHHHHHHHS--C-TTCCE
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-----------------CCeEEEEeCCH-----------HHHHHHHHhC--C-CceEE
Confidence 3579999999999988776221 26788888742 1111111111 0 01233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++..-.++ +++|++++..++||+.+. +...+|+.
T Consensus 94 ---~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~---------------------------------------~~~~~l~~ 130 (220)
T 3hnr_A 94 ---TEGDFLSFEVP-TSIDTIVSTYAFHHLTDD---------------------------------------EKNVAIAK 130 (220)
T ss_dssp ---ESCCSSSCCCC-SCCSEEEEESCGGGSCHH---------------------------------------HHHHHHHH
T ss_pred ---EeCChhhcCCC-CCeEEEEECcchhcCChH---------------------------------------HHHHHHHH
Confidence 45788776677 999999999999995331 11234777
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
-.+.|+|||.+++..+...... .....+..+...|.... ..-..+.++++.+|++.++++.| |+|...+..
T Consensus 131 ~~~~LkpgG~l~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 201 (220)
T 3hnr_A 131 YSQLLNKGGKIVFADTIFADQD-----AYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVTFTRLN 201 (220)
T ss_dssp HHHHSCTTCEEEEEEECBSSHH-----HHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEEEEECS
T ss_pred HHHhcCCCCEEEEEeccccChH-----HHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEEEeecc
Confidence 7899999999999976554222 11222333334443211 11233467789999999999999 999888765
Q ss_pred eecC
Q 044727 302 HISW 305 (380)
Q Consensus 302 ~~~~ 305 (380)
...|
T Consensus 202 ~~~w 205 (220)
T 3hnr_A 202 HFVW 205 (220)
T ss_dssp SSEE
T ss_pred ceEE
Confidence 5444
No 13
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.07 E-value=3.1e-09 Score=100.60 Aligned_cols=149 Identities=11% Similarity=0.054 Sum_probs=95.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhh---hhcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLK---TERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~---~~~~~~~~~ 138 (380)
...+|+|+|||+|..+..+.... + .+|+..|+.. .+. ...+ ...+.. ..
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~---------------~-~~v~gvD~s~----------~~~-~~a~~~~~~~~~~-~~ 133 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF---------------G-VSIDCLNIAP----------VQN-KRNEEYNNQAGLA-DN 133 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEESCH----------HHH-HHHHHHHHHHTCT-TT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh---------------C-CEEEEEeCCH----------HHH-HHHHHHHHhcCCC-cc
Confidence 45799999999999988774332 2 5788888743 111 1111 011100 01
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +.+++....+|++++|++++..++||+.+.+ .+
T Consensus 134 ~~~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------------------~~ 169 (297)
T 2o57_A 134 ITV---KYGSFLEIPCEDNSYDFIWSQDAFLHSPDKL-----------------------------------------KV 169 (297)
T ss_dssp EEE---EECCTTSCSSCTTCEEEEEEESCGGGCSCHH-----------------------------------------HH
T ss_pred eEE---EEcCcccCCCCCCCEeEEEecchhhhcCCHH-----------------------------------------HH
Confidence 233 4578877788999999999999999965411 23
Q ss_pred HHHHHHHhccCceEEEEeccCCC-cchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeE
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDK-YHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQ 297 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~-~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~ 297 (380)
|+.-.+.|+|||++++..+.... .....+. ..+..+ ..| ..++.+++...+++.| |++..
T Consensus 170 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~---~~~~~~--------------~~~-~~~~~~~~~~~l~~aG-f~~~~ 230 (297)
T 2o57_A 170 FQECARVLKPRGVMAITDPMKEDGIDKSSIQ---PILDRI--------------KLH-DMGSLGLYRSLAKECG-LVTLR 230 (297)
T ss_dssp HHHHHHHEEEEEEEEEEEEEECTTCCGGGGH---HHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHHHcCCCeEEEEEEeccCCCCchHHHH---HHHHHh--------------cCC-CCCCHHHHHHHHHHCC-CeEEE
Confidence 66678999999999999876541 1101111 111211 112 2568999999999999 99877
Q ss_pred EEEE
Q 044727 298 LETS 301 (380)
Q Consensus 298 ~e~~ 301 (380)
++.+
T Consensus 231 ~~~~ 234 (297)
T 2o57_A 231 TFSR 234 (297)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7654
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.07 E-value=3.1e-09 Score=98.14 Aligned_cols=208 Identities=17% Similarity=0.141 Sum_probs=121.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhh---hhcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLK---TERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~---~~~~~~~~~ 138 (380)
...+|+|+|||+|..+..+.... + .+|+..|+.. ......+ ...+.. ..
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~---------------~-~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-~~ 97 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYV---------------K-GQITGIDLFP-----------DFIEIFNENAVKANCA-DR 97 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHC---------------C-SEEEEEESCH-----------HHHHHHHHHHHHTTCT-TT
T ss_pred CCCeEEEeCCCCCHHHHHHHHhC---------------C-CeEEEEECCH-----------HHHHHHHHHHHHcCCC-Cc
Confidence 34699999999999988773321 3 3888888742 1111111 111100 01
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +.+++....+|++++|++++..++||+ + |. .+
T Consensus 98 ~~~---~~~d~~~~~~~~~~fD~v~~~~~l~~~-~-~~----------------------------------------~~ 132 (257)
T 3f4k_A 98 VKG---ITGSMDNLPFQNEELDLIWSEGAIYNI-G-FE----------------------------------------RG 132 (257)
T ss_dssp EEE---EECCTTSCSSCTTCEEEEEEESCSCCC-C-HH----------------------------------------HH
T ss_pred eEE---EECChhhCCCCCCCEEEEEecChHhhc-C-HH----------------------------------------HH
Confidence 234 447776667889999999999999996 2 11 12
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEE
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQL 298 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~ 298 (380)
|+.-.+.|+|||++++..+....... ...+...|.+. .|. .++.+++...+++.| |++...
T Consensus 133 l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~~~~~~~~---------------~~~-~~~~~~~~~~l~~aG-f~~v~~ 193 (257)
T 3f4k_A 133 MNEWSKYLKKGGFIAVSEASWFTSER--PAEIEDFWMDA---------------YPE-ISVIPTCIDKMERAG-YTPTAH 193 (257)
T ss_dssp HHHHHTTEEEEEEEEEEEEEESSSCC--CHHHHHHHHHH---------------CTT-CCBHHHHHHHHHHTT-EEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEeeccCCCC--hHHHHHHHHHh---------------CCC-CCCHHHHHHHHHHCC-CeEEEE
Confidence 66668899999999999865321110 01122223321 011 568999999999999 998886
Q ss_pred EEEe-ecCCcCccCCcccchhhHHHHHHHHHHHHHHHhhHHHHHhhChhHHHHHHHHHHHHHHHHHHhccCCEEEEEEEE
Q 044727 299 ETSH-ISWSVGYENNNKGLELNAHARAKNVADNIRAVSESLLANHFGSAIMDDLFHRFTIKISAHLEMGLGAYTVLFIYL 377 (380)
Q Consensus 299 e~~~-~~~~~~~~~~~~~~d~~~~~~a~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~v~~~l~~~~~~~~~~~~~l 377 (380)
..+. ..|...|. ..... ..+.+...+-++...+++.++..+....+ ..+...+--+++++
T Consensus 194 ~~~~~~~w~~~~~----------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~v~ 254 (257)
T 3f4k_A 194 FILPENCWTEHYF----------APQDE--------VRETFMKEHAGNKTAMDFMKGQQYERSLY-SKYKDYYGYVFYIG 254 (257)
T ss_dssp EECCGGGTCCCCC----------HHHHH--------HHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEEE
T ss_pred EECChhhHHHHHH----------HHHHH--------HHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHhCCccceEEEEE
Confidence 5543 33422111 11111 22233334445556666666666665543 34455566667777
Q ss_pred EeC
Q 044727 378 IKK 380 (380)
Q Consensus 378 ~r~ 380 (380)
+|+
T Consensus 255 ~k~ 257 (257)
T 3f4k_A 255 QKR 257 (257)
T ss_dssp EEC
T ss_pred ecC
Confidence 774
No 15
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.04 E-value=1.7e-09 Score=102.15 Aligned_cols=162 Identities=17% Similarity=0.161 Sum_probs=95.3
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
..+|+|+|||+|..|+.+...+ ..|..+|+.-|+.. .++ +..+. ..+ ...+-
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~-------------~~~~~~v~gvD~s~----------~ml-~~A~~~~~~~~-~~~~v 125 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNI-------------HHDNCKIIAIDNSP----------AMI-ERCRRHIDAYK-APTPV 125 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTC-------------CSSSCEEEEEESCH----------HHH-HHHHHHHHTSC-CSSCE
T ss_pred CCEEEEEeCCCCHHHHHHHHhc-------------CCCCCEEEEEECCH----------HHH-HHHHHHHHhhc-cCceE
Confidence 4799999999999988773322 22568999999853 222 11211 111 10112
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
-| +.|++.+- |-.+.|+++++++|||+. .. |...+|
T Consensus 126 ~~---~~~D~~~~--~~~~~d~v~~~~~l~~~~---~~------------------------------------~~~~~l 161 (261)
T 4gek_A 126 DV---IEGDIRDI--AIENASMVVLNFTLQFLE---PS------------------------------------ERQALL 161 (261)
T ss_dssp EE---EESCTTTC--CCCSEEEEEEESCGGGSC---HH------------------------------------HHHHHH
T ss_pred EE---eecccccc--cccccccceeeeeeeecC---ch------------------------------------hHhHHH
Confidence 34 34777553 455699999999999953 21 233457
Q ss_pred HHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHH-HccCccccccc----ccccCcccCCHHHHHHHHHhcCcee
Q 044727 220 KFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMV-YEGLIEVSKLE----SFHFPMYNPCVEEVRQVIEREGSFN 294 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv-~eG~i~~e~~d----~f~~P~Y~ps~eE~~~~ie~~GsF~ 294 (380)
+.-++.|+|||+|+++-....... ...+.+...+.+.. ..|+ ++.++. ...-.....|.+|+...+++.| |+
T Consensus 162 ~~i~~~LkpGG~lii~e~~~~~~~-~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~ 238 (261)
T 4gek_A 162 DKIYQGLNPGGALVLSEKFSFEDA-KVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHKAG-FE 238 (261)
T ss_dssp HHHHHHEEEEEEEEEEEEBCCSSH-HHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CS
T ss_pred HHHHHHcCCCcEEEEEeccCCCCH-HHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CC
Confidence 778999999999999865544222 11222222233322 2233 222211 1112234468999999999999 87
Q ss_pred Ee
Q 044727 295 IH 296 (380)
Q Consensus 295 I~ 296 (380)
..
T Consensus 239 ~v 240 (261)
T 4gek_A 239 HS 240 (261)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 16
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.03 E-value=2e-09 Score=97.48 Aligned_cols=176 Identities=12% Similarity=0.005 Sum_probs=105.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCC---
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFG--- 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~--- 138 (380)
...+|+|+|||+|..+..+... ..+++..|+.. ......+.........
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~ 81 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK-----------------GYSVTGIDINS-----------EAIRLAETAARSPGLNQKT 81 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHHHTTCCSCCSSS
T ss_pred CCCeEEEECCCCCHHHHHHHhC-----------------CCeEEEEECCH-----------HHHHHHHHHHHhcCCcccc
Confidence 4579999999999988777221 25788888742 1111111110000000
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
.--+..+.+++....++++++|+++++.++|++.+.. ++..+
T Consensus 82 ~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--------------------------------------~~~~~ 123 (235)
T 3sm3_A 82 GGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPK--------------------------------------ERSRI 123 (235)
T ss_dssp SCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHH--------------------------------------HHHHH
T ss_pred CcceEEEEecccccCCCCCceeEEEEcchhhcCCCHH--------------------------------------HHHHH
Confidence 0012234577777778899999999999999954311 22345
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCccccccccc--ccCcccCCHHHHHHHHHhcCceeEe
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESF--HFPMYNPCVEEVRQVIEREGSFNIH 296 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f--~~P~Y~ps~eE~~~~ie~~GsF~I~ 296 (380)
|+.-.+.|+|||++++..+++..............+.....+|.......... ....++++.+|++.++++.| |++.
T Consensus 124 l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~~~ 202 (235)
T 3sm3_A 124 IKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FEID 202 (235)
T ss_dssp HHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EEEE
T ss_pred HHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CEEE
Confidence 77778999999999999988763321111222222222222222111111111 23356789999999999999 9999
Q ss_pred EEEEEeec
Q 044727 297 QLETSHIS 304 (380)
Q Consensus 297 ~~e~~~~~ 304 (380)
.++....+
T Consensus 203 ~~~~~~~~ 210 (235)
T 3sm3_A 203 YFRVKELE 210 (235)
T ss_dssp EEEEEEEE
T ss_pred EEEeccee
Confidence 98876544
No 17
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.99 E-value=1.2e-08 Score=95.25 Aligned_cols=153 Identities=14% Similarity=0.102 Sum_probs=95.8
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
+...+|+|+|||+|..++.+... +..+|+..|+... . +........ ..+.. ..-.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~----------------~~~~v~gvD~s~~-~------~~~a~~~~~-~~~~~-~~v~ 99 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH----------------VTGQVTGLDFLSG-F------IDIFNRNAR-QSGLQ-NRVT 99 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT----------------CSSEEEEEESCHH-H------HHHHHHHHH-HTTCT-TTEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc----------------cCCEEEEEeCCHH-H------HHHHHHHHH-HcCCC-cCcE
Confidence 34689999999999988877211 3468999998431 0 000001111 11100 0123
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +.+++..-.+|++++|+++|..++|++ .. . .+|+
T Consensus 100 ~---~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~-~----------------------------------------~~l~ 134 (267)
T 3kkz_A 100 G---IVGSMDDLPFRNEELDLIWSEGAIYNI-GF-E----------------------------------------RGLN 134 (267)
T ss_dssp E---EECCTTSCCCCTTCEEEEEESSCGGGT-CH-H----------------------------------------HHHH
T ss_pred E---EEcChhhCCCCCCCEEEEEEcCCceec-CH-H----------------------------------------HHHH
Confidence 4 447776667889999999999999996 21 1 1366
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.-.+.|+|||++++..+....... ...+...|.+ . .| ..++.+++...+++.| |++..++.
T Consensus 135 ~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~~~ 195 (267)
T 3kkz_A 135 EWRKYLKKGGYLAVSECSWFTDER--PAEINDFWMD----A-----------YP-EIDTIPNQVAKIHKAG-YLPVATFI 195 (267)
T ss_dssp HHGGGEEEEEEEEEEEEEESSSCC--CHHHHHHHHH----H-----------CT-TCEEHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHHHcCCCCEEEEEEeeecCCCC--hHHHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CEEEEEEE
Confidence 668999999999999875331110 0112222221 0 12 4578999999999999 99987766
Q ss_pred Ee
Q 044727 301 SH 302 (380)
Q Consensus 301 ~~ 302 (380)
+.
T Consensus 196 ~~ 197 (267)
T 3kkz_A 196 LP 197 (267)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 18
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.99 E-value=2.7e-09 Score=99.06 Aligned_cols=154 Identities=15% Similarity=0.146 Sum_probs=96.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..+..+.. . - .+|+..|+.. .+. ...+. ..+.. +
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~--------~--------~-~~v~gvD~s~----------~~l-~~a~~~~~~~~~~--~ 86 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAP--------F--------V-KKVVAFDLTE----------DIL-KVARAFIEGNGHQ--Q 86 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGG--------G--------S-SEEEEEESCH----------HHH-HHHHHHHHHTTCC--S
T ss_pred CCCEEEEEeCCCCHHHHHHHH--------h--------C-CEEEEEeCCH----------HHH-HHHHHHHHhcCCC--c
Confidence 457999999999998876621 1 1 3788888742 111 11111 11100 1
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +.+++....+|++++|+++|..++||+.+.+ .+
T Consensus 87 v~~---~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~-----------------------------------------~~ 122 (260)
T 1vl5_A 87 VEY---VQGDAEQMPFTDERFHIVTCRIAAHHFPNPA-----------------------------------------SF 122 (260)
T ss_dssp EEE---EECCC-CCCSCTTCEEEEEEESCGGGCSCHH-----------------------------------------HH
T ss_pred eEE---EEecHHhCCCCCCCEEEEEEhhhhHhcCCHH-----------------------------------------HH
Confidence 233 4578877788999999999999999974321 23
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEE
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQL 298 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~ 298 (380)
|+.-.+.|+|||++++......... .++.....+..+ . . .......+.+++..++++.| |++..+
T Consensus 123 l~~~~r~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~-~----~-------~~~~~~~~~~~~~~~l~~aG-f~~~~~ 187 (260)
T 1vl5_A 123 VSEAYRVLKKGGQLLLVDNSAPEND--AFDVFYNYVEKE-R----D-------YSHHRAWKKSDWLKMLEEAG-FELEEL 187 (260)
T ss_dssp HHHHHHHEEEEEEEEEEEEEBCSSH--HHHHHHHHHHHH-H----C-------TTCCCCCBHHHHHHHHHHHT-CEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEcCCCCCH--HHHHHHHHHHHh-c----C-------ccccCCCCHHHHHHHHHHCC-CeEEEE
Confidence 6666899999999999866543221 222221122211 0 0 11234568999999999999 999888
Q ss_pred EEEeec
Q 044727 299 ETSHIS 304 (380)
Q Consensus 299 e~~~~~ 304 (380)
+.+..+
T Consensus 188 ~~~~~~ 193 (260)
T 1vl5_A 188 HCFHKT 193 (260)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 877654
No 19
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.98 E-value=1.1e-07 Score=89.38 Aligned_cols=154 Identities=14% Similarity=0.223 Sum_probs=92.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..+..+.... + .+|+..|+.. ......+. ..+ ....
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~---------------~-~~v~gvd~s~-----------~~~~~a~~~~~~~~-~~~~ 115 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY---------------D-VNVVGLTLSK-----------NQANHVQQLVANSE-NLRS 115 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEESCH-----------HHHHHHHHHHHTCC-CCSC
T ss_pred CcCEEEEECCcccHHHHHHHHHc---------------C-CEEEEEECCH-----------HHHHHHHHHHHhcC-CCCC
Confidence 35799999999999888774322 2 4888888742 11111111 111 0001
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +.+++.. +| +++|+++|..++|++.. . |+..+
T Consensus 116 ~~~---~~~d~~~--~~-~~fD~v~~~~~l~~~~~---~------------------------------------~~~~~ 150 (287)
T 1kpg_A 116 KRV---LLAGWEQ--FD-EPVDRIVSIGAFEHFGH---E------------------------------------RYDAF 150 (287)
T ss_dssp EEE---EESCGGG--CC-CCCSEEEEESCGGGTCT---T------------------------------------THHHH
T ss_pred eEE---EECChhh--CC-CCeeEEEEeCchhhcCh---H------------------------------------HHHHH
Confidence 123 3356632 35 89999999999999642 1 22344
Q ss_pred HHHHHHHhccCceEEEEeccCCCcc-----h-h-HHHHHHHHHHHHHHccCcccccccccccC-cccCCHHHHHHHHHhc
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYH-----T-G-VFELMGMVLNDMVYEGLIEVSKLESFHFP-MYNPCVEEVRQVIERE 290 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~-----~-~-~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~Y~ps~eE~~~~ie~~ 290 (380)
|+.-.+.|+|||++++..+...... + . .+.. ..+.+...+. ..| ...|+++|+...+++.
T Consensus 151 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~a 218 (287)
T 1kpg_A 151 FSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTF--ARFLKFIVTE----------IFPGGRLPSIPMVQECASAN 218 (287)
T ss_dssp HHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHH--HHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCEEEEEEecCCCccccccccccccccc--cchhhhHHhe----------eCCCCCCCCHHHHHHHHHhC
Confidence 7777899999999999988654211 0 0 0000 0111111111 112 2457999999999999
Q ss_pred CceeEeEEEEE
Q 044727 291 GSFNIHQLETS 301 (380)
Q Consensus 291 GsF~I~~~e~~ 301 (380)
| |++..++.+
T Consensus 219 G-f~~~~~~~~ 228 (287)
T 1kpg_A 219 G-FTVTRVQSL 228 (287)
T ss_dssp T-CEEEEEEEC
T ss_pred C-cEEEEEEeC
Confidence 9 999877643
No 20
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.98 E-value=6.6e-09 Score=97.15 Aligned_cols=158 Identities=15% Similarity=0.180 Sum_probs=98.3
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDF 137 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~ 137 (380)
+...+|+|+|||+|..+..+... . |..+++..|+.. ......+. ..+..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~--------~-------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-- 87 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKN--------N-------PDAEITSIDISP-----------ESLEKARENTEKNGIK-- 87 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHH--------C-------TTSEEEEEESCH-----------HHHHHHHHHHHHTTCC--
T ss_pred CCCCeEEEecCCCCHHHHHHHHh--------C-------CCCEEEEEECCH-----------HHHHHHHHHHHHcCCC--
Confidence 34589999999999988776322 1 457899999742 11111111 11100
Q ss_pred CcceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 138 GSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 138 ~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
+-.| +.+++....+|++++|++++..++||+.+.+ .
T Consensus 88 ~~~~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------------------~ 123 (276)
T 3mgg_A 88 NVKF---LQANIFSLPFEDSSFDHIFVCFVLEHLQSPE-----------------------------------------E 123 (276)
T ss_dssp SEEE---EECCGGGCCSCTTCEEEEEEESCGGGCSCHH-----------------------------------------H
T ss_pred CcEE---EEcccccCCCCCCCeeEEEEechhhhcCCHH-----------------------------------------H
Confidence 1233 4478878788999999999999999964421 2
Q ss_pred HHHHHHHHhccCceEEEEeccCC-----CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCc
Q 044727 218 FLKFRSEELKTEGRMVLNFIGND-----KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGS 292 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~-----~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~Gs 292 (380)
+|+.-.+.|+|||++++.....+ +......... ..+.++... ......+.+++..++++.|
T Consensus 124 ~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~l~~~l~~aG- 189 (276)
T 3mgg_A 124 ALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAW-NCLIRVQAY------------MKGNSLVGRQIYPLLQESG- 189 (276)
T ss_dssp HHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHH-HHHHHHHHH------------TTCCTTGGGGHHHHHHHTT-
T ss_pred HHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHH-HHHHHHHHh------------cCCCcchHHHHHHHHHHCC-
Confidence 36666889999999999876543 1111111111 112222111 0111235689999999999
Q ss_pred eeEeEEEEEeec
Q 044727 293 FNIHQLETSHIS 304 (380)
Q Consensus 293 F~I~~~e~~~~~ 304 (380)
|++..++....+
T Consensus 190 f~~v~~~~~~~~ 201 (276)
T 3mgg_A 190 FEKIRVEPRMVY 201 (276)
T ss_dssp CEEEEEEEEEEE
T ss_pred CCeEEEeeEEEE
Confidence 999998876544
No 21
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.97 E-value=2.2e-09 Score=101.22 Aligned_cols=166 Identities=17% Similarity=0.201 Sum_probs=101.0
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCC--C
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDF--G 138 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~--~ 138 (380)
+++.+|+|+|||+|..+..+... ..+|+..|+.. ......+........ .
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~ 118 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-----------------GHQVILCDLSA-----------QMIDRAKQAAEAKGVSDN 118 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHHHHHC-CCGGG
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-----------------CCEEEEEECCH-----------HHHHHHHHHHHhcCCCcc
Confidence 34689999999999988776221 26788888742 111111110000000 1
Q ss_pred cceeeccCCCcccCC-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRL-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
-.| +.+++.... ++++++|++++..++||+.+. ..
T Consensus 119 v~~---~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~ 154 (285)
T 4htf_A 119 MQF---IHCAAQDVASHLETPVDLILFHAVLEWVADP-----------------------------------------RS 154 (285)
T ss_dssp EEE---EESCGGGTGGGCSSCEEEEEEESCGGGCSCH-----------------------------------------HH
T ss_pred eEE---EEcCHHHhhhhcCCCceEEEECchhhcccCH-----------------------------------------HH
Confidence 123 447776655 789999999999999996332 12
Q ss_pred HHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeE
Q 044727 218 FLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQ 297 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~ 297 (380)
+|+.-++.|+|||++++....+.... ....+...+.. ...+..... .....+.++.+++|+..++++.| |++..
T Consensus 155 ~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~ 228 (285)
T 4htf_A 155 VLQTLWSVLRPGGVLSLMFYNAHGLL--MHNMVAGNFDY-VQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMG 228 (285)
T ss_dssp HHHHHHHTEEEEEEEEEEEEBHHHHH--HHHHHTTCHHH-HHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEeCCchHH--HHHHHhcCHHH-Hhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-Cceee
Confidence 36677899999999999988654110 00111111111 122221111 12234567789999999999999 99998
Q ss_pred EEEEeec
Q 044727 298 LETSHIS 304 (380)
Q Consensus 298 ~e~~~~~ 304 (380)
.+.+...
T Consensus 229 ~~~~~~~ 235 (285)
T 4htf_A 229 KTGVRVF 235 (285)
T ss_dssp EEEESSS
T ss_pred eeeEEEe
Confidence 8877644
No 22
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=7.8e-10 Score=103.35 Aligned_cols=150 Identities=10% Similarity=0.073 Sum_probs=98.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.. +..+|+..|+.. .. ..... ...+-.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~-----------~~---~~~a~--~~~~~~~ 80 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN-----------------QGLFVYAVEPSI-----------VM---RQQAV--VHPQVEW 80 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT-----------------TTCEEEEECSCH-----------HH---HHSSC--CCTTEEE
T ss_pred CCCEEEEEcCcccHHHHHHHh-----------------CCCEEEEEeCCH-----------HH---HHHHH--hccCCEE
Confidence 468999999999998887721 347899999842 11 10000 1111233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++..-.+|++++|++++..++||+.+. ..+|+.
T Consensus 81 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~~ 116 (261)
T 3ege_A 81 ---FTGYAENLALPDKSVDGVISILAIHHFSHL-----------------------------------------EKSFQE 116 (261)
T ss_dssp ---ECCCTTSCCSCTTCBSEEEEESCGGGCSSH-----------------------------------------HHHHHH
T ss_pred ---EECchhhCCCCCCCEeEEEEcchHhhccCH-----------------------------------------HHHHHH
Confidence 457787777889999999999999996322 233666
Q ss_pred HHHHhccCceEEEEeccCCCcch-hHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHT-GVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~-~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-.+.|+ ||++++..+....... .....+ .++.. ....++++.+++. .+++.| |++.+++.
T Consensus 117 ~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~----~~~~~------------~~~~~~~~~~~~~-~l~~aG-F~~v~~~~ 177 (261)
T 3ege_A 117 MQRIIR-DGTIVLLTFDIRLAQRIWLYDYF----PFLWE------------DALRFLPLDEQIN-LLQENT-KRRVEAIP 177 (261)
T ss_dssp HHHHBC-SSCEEEEEECGGGCCCCGGGGTC----HHHHH------------HHHTSCCHHHHHH-HHHHHH-CSEEEEEE
T ss_pred HHHHhC-CcEEEEEEcCCchhHHHHHHHHH----HHHhh------------hhhhhCCCHHHHH-HHHHcC-CCceeEEE
Confidence 789999 9999988886542111 111111 11100 1123467789999 999999 99999888
Q ss_pred EeecCCc
Q 044727 301 SHISWSV 307 (380)
Q Consensus 301 ~~~~~~~ 307 (380)
+..|+..
T Consensus 178 ~~~p~~~ 184 (261)
T 3ege_A 178 FLLPHDL 184 (261)
T ss_dssp CCEETTC
T ss_pred ecCCCcC
Confidence 8766543
No 23
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.96 E-value=3.9e-09 Score=94.07 Aligned_cols=143 Identities=12% Similarity=0.065 Sum_probs=99.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|.++..+... ..+++..|+.. ......+... . .-.|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~gvD~s~-----------~~~~~a~~~~--~--~~~~- 88 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-----------------GHQIEGLEPAT-----------RLVELARQTH--P--SVTF- 88 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-----------------TCCEEEECCCH-----------HHHHHHHHHC--T--TSEE-
T ss_pred CCeEEEecCCCCHHHHHHHhc-----------------CCeEEEEeCCH-----------HHHHHHHHhC--C--CCeE-
Confidence 579999999999988766221 24788888732 1111111111 1 2234
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
+.+++....+|++++|+++++.++||+.. . |...+|+.-
T Consensus 89 --~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---~------------------------------------~~~~~l~~~ 127 (203)
T 3h2b_A 89 --HHGTITDLSDSPKRWAGLLAWYSLIHMGP---G------------------------------------ELPDALVAL 127 (203)
T ss_dssp --ECCCGGGGGGSCCCEEEEEEESSSTTCCT---T------------------------------------THHHHHHHH
T ss_pred --EeCcccccccCCCCeEEEEehhhHhcCCH---H------------------------------------HHHHHHHHH
Confidence 44777777788999999999999999641 1 233457777
Q ss_pred HHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEEe
Q 044727 223 SEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETSH 302 (380)
Q Consensus 223 a~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~ 302 (380)
++.|+|||++++..+..... ..++....+.+..+.+|+..++++.| |++..++.+.
T Consensus 128 ~~~L~pgG~l~i~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 183 (203)
T 3h2b_A 128 RMAVEDGGGLLMSFFSGPSL-----------------------EPMYHPVATAYRWPLPELAQALETAG-FQVTSSHWDP 183 (203)
T ss_dssp HHTEEEEEEEEEEEECCSSC-----------------------EEECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECT
T ss_pred HHHcCCCcEEEEEEccCCch-----------------------hhhhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecC
Confidence 89999999999999766421 12222344677889999999999999 9999988765
Q ss_pred e
Q 044727 303 I 303 (380)
Q Consensus 303 ~ 303 (380)
.
T Consensus 184 ~ 184 (203)
T 3h2b_A 184 R 184 (203)
T ss_dssp T
T ss_pred C
Confidence 4
No 24
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.95 E-value=5.5e-09 Score=95.96 Aligned_cols=143 Identities=17% Similarity=0.195 Sum_probs=94.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.. . ..+|+..|+.. ......+ . .
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~gvD~s~-----------~~~~~a~-----~--~--- 82 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKE--------E---------GIESIGVDINE-----------DMIKFCE-----G--K--- 82 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHH--------H---------TCCEEEECSCH-----------HHHHHHH-----T--T---
T ss_pred CCCeEEEEeCCCCHHHHHHHh--------C---------CCcEEEEECCH-----------HHHHHHH-----h--h---
Confidence 458999999999998765522 1 14678888732 1111111 1 1
Q ss_pred eeccCCCcccC--CCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGR--LFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 142 ~~~vpgSFy~~--l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
+..+.++...- .+|++++|+|+|+.++||+.+ . |+..+|
T Consensus 83 ~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~---~------------------------------------~~~~~l 123 (240)
T 3dli_A 83 FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP---E------------------------------------RLFELL 123 (240)
T ss_dssp SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG---G------------------------------------GHHHHH
T ss_pred cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc---H------------------------------------HHHHHH
Confidence 12234565443 678999999999999999642 1 344557
Q ss_pred HHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEE
Q 044727 220 KFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLE 299 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e 299 (380)
+.-.+.|+|||++++.+++.... ... .+. .+. ....+.++.+++..++++.| |++..++
T Consensus 124 ~~~~~~LkpgG~l~~~~~~~~~~----~~~-----~~~----~~~-------~~~~~~~~~~~l~~~l~~aG-f~~~~~~ 182 (240)
T 3dli_A 124 SLCYSKMKYSSYIVIESPNPTSL----YSL-----INF----YID-------PTHKKPVHPETLKFILEYLG-FRDVKIE 182 (240)
T ss_dssp HHHHHHBCTTCCEEEEEECTTSH----HHH-----HHH----TTS-------TTCCSCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred HHHHHHcCCCcEEEEEeCCcchh----HHH-----HHH----hcC-------ccccccCCHHHHHHHHHHCC-CeEEEEE
Confidence 78899999999999999875421 111 111 111 12345678899999999999 9998888
Q ss_pred EEe
Q 044727 300 TSH 302 (380)
Q Consensus 300 ~~~ 302 (380)
.+.
T Consensus 183 ~~~ 185 (240)
T 3dli_A 183 FFE 185 (240)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.93 E-value=1.8e-08 Score=90.25 Aligned_cols=158 Identities=9% Similarity=0.018 Sum_probs=94.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..+..+... ..+++..|+.. ......+. .+ . .+-.|
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~~D~s~-----------~~~~~a~~-~~-~-~~~~~- 94 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL-----------------ADRVTALDGSA-----------EMIAEAGR-HG-L-DNVEF- 94 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH-----------------SSEEEEEESCH-----------HHHHHHGG-GC-C-TTEEE-
T ss_pred CCeEEEECCCCCHHHHHHHhc-----------------CCeEEEEeCCH-----------HHHHHHHh-cC-C-CCeEE-
Confidence 469999999999988876322 15788888732 11111111 11 0 12233
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
+.+++... +|++++|+++++.++||+.+ . ++..+|+.-
T Consensus 95 --~~~d~~~~-~~~~~~D~v~~~~~l~~~~~---~------------------------------------~~~~~l~~~ 132 (218)
T 3ou2_A 95 --RQQDLFDW-TPDRQWDAVFFAHWLAHVPD---D------------------------------------RFEAFWESV 132 (218)
T ss_dssp --EECCTTSC-CCSSCEEEEEEESCGGGSCH---H------------------------------------HHHHHHHHH
T ss_pred --EecccccC-CCCCceeEEEEechhhcCCH---H------------------------------------HHHHHHHHH
Confidence 44777554 89999999999999999543 1 233457777
Q ss_pred HHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccc--cccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 223 SEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVS--KLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 223 a~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e--~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.+.|+|||.+++...++.... .... +....... +... .-..+.....+++++|+..++++.| |+++..+.
T Consensus 133 ~~~L~pgG~l~~~~~~~~~~~--~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~ 204 (218)
T 3ou2_A 133 RSAVAPGGVVEFVDVTDHERR--LEQQ----DDSEPEVA-VRRTLQDGRSFRIVKVFRSPAELTERLTALG-WSCSVDEV 204 (218)
T ss_dssp HHHEEEEEEEEEEEECCCC------------------CE-EEEECTTSCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHcCCCeEEEEEeCCCCccc--cchh----hhcccccc-eeeecCCcchhhHhhcCCCHHHHHHHHHHCC-CEEEeeec
Confidence 899999999999998874211 1111 11100000 0000 0001111234679999999999999 99877776
Q ss_pred Ee
Q 044727 301 SH 302 (380)
Q Consensus 301 ~~ 302 (380)
..
T Consensus 205 ~~ 206 (218)
T 3ou2_A 205 HP 206 (218)
T ss_dssp ET
T ss_pred cc
Confidence 43
No 26
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.91 E-value=3.2e-09 Score=100.15 Aligned_cols=103 Identities=13% Similarity=0.179 Sum_probs=70.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
..-+|+|+|||+|..|..+. +. -.+|+..|+.. .++ .... ...+-.|
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~--------~~---------~~~v~gvD~s~----------~ml----~~a~--~~~~v~~ 85 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLA--------EF---------FERVHAVDPGE----------AQI----RQAL--RHPRVTY 85 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHH--------TT---------CSEEEEEESCH----------HHH----HTCC--CCTTEEE
T ss_pred CCCCEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEeCcH----------Hhh----hhhh--hcCCcee
Confidence 34689999999999988772 11 15788888732 111 1111 1112234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+-+++....+|++|+|+|+++.++||+. .+ .||+.
T Consensus 86 ---~~~~~e~~~~~~~sfD~v~~~~~~h~~~-~~-----------------------------------------~~~~e 120 (257)
T 4hg2_A 86 ---AVAPAEDTGLPPASVDVAIAAQAMHWFD-LD-----------------------------------------RFWAE 120 (257)
T ss_dssp ---EECCTTCCCCCSSCEEEEEECSCCTTCC-HH-----------------------------------------HHHHH
T ss_pred ---ehhhhhhhcccCCcccEEEEeeehhHhh-HH-----------------------------------------HHHHH
Confidence 3478888889999999999999999963 11 12555
Q ss_pred HHHHhccCceEEEEeccCCCc
Q 044727 222 RSEELKTEGRMVLNFIGNDKY 242 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~ 242 (380)
-++.|||||+|++...+....
T Consensus 121 ~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 121 LRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp HHHHEEEEEEEEEEEECCCBC
T ss_pred HHHHcCCCCEEEEEECCCCCC
Confidence 588999999999998877643
No 27
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.91 E-value=9.2e-09 Score=94.64 Aligned_cols=157 Identities=15% Similarity=0.199 Sum_probs=96.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... -.+++..|+.. +. +........ ..+.. +-.|
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~~vD~s~-~~------~~~a~~~~~-~~~~~--~v~~ 73 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPY-----------------VQECIGVDATK-EM------VEVASSFAQ-EKGVE--NVRF 73 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG-----------------SSEEEEEESCH-HH------HHHHHHHHH-HHTCC--SEEE
T ss_pred CCCEEEEEccCcCHHHHHHHHh-----------------CCEEEEEECCH-HH------HHHHHHHHH-HcCCC--CeEE
Confidence 4589999999999988766211 13788888732 00 000000011 11101 1233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....++++++|++++..++||+.+.+ .+|+.
T Consensus 74 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------------------~~l~~ 109 (239)
T 1xxl_A 74 ---QQGTAESLPFPDDSFDIITCRYAAHHFSDVR-----------------------------------------KAVRE 109 (239)
T ss_dssp ---EECBTTBCCSCTTCEEEEEEESCGGGCSCHH-----------------------------------------HHHHH
T ss_pred ---EecccccCCCCCCcEEEEEECCchhhccCHH-----------------------------------------HHHHH
Confidence 3467767678899999999999999964321 23666
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
-.+.|+|||++++......... ..+.+.+.+..+ ..+ ......+.+|+..++++.| |++..++.+
T Consensus 110 ~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~ll~~aG-f~~~~~~~~ 174 (239)
T 1xxl_A 110 VARVLKQDGRFLLVDHYAPEDP--VLDEFVNHLNRL-RDP-----------SHVRESSLSEWQAMFSANQ-LAYQDIQKW 174 (239)
T ss_dssp HHHHEEEEEEEEEEEECBCSSH--HHHHHHHHHHHH-HCT-----------TCCCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred HHHHcCCCcEEEEEEcCCCCCh--hHHHHHHHHHHh-ccc-----------cccCCCCHHHHHHHHHHCC-CcEEEEEee
Confidence 6899999999999876543221 222222222211 111 1123458999999999999 999888876
Q ss_pred eec
Q 044727 302 HIS 304 (380)
Q Consensus 302 ~~~ 304 (380)
..+
T Consensus 175 ~~~ 177 (239)
T 1xxl_A 175 NLP 177 (239)
T ss_dssp EEE
T ss_pred cCc
Confidence 544
No 28
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.89 E-value=1.4e-08 Score=92.70 Aligned_cols=149 Identities=15% Similarity=0.160 Sum_probs=97.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ..+++..|+.. ......+... ...+-.|
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~--~~~~~~~ 102 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT-----------------GYKAVGVDISE-----------VMIQKGKERG--EGPDLSF 102 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHTTT--CBTTEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHc-----------------CCeEEEEECCH-----------HHHHHHHhhc--ccCCceE
Confidence 4579999999999988776221 25788888732 1111111110 0012234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|++++..++||+.+. ..+|+.
T Consensus 103 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~~ 138 (242)
T 3l8d_A 103 ---IKGDLSSLPFENEQFEAIMAINSLEWTEEP-----------------------------------------LRALNE 138 (242)
T ss_dssp ---EECBTTBCSSCTTCEEEEEEESCTTSSSCH-----------------------------------------HHHHHH
T ss_pred ---EEcchhcCCCCCCCccEEEEcChHhhccCH-----------------------------------------HHHHHH
Confidence 347777777899999999999999996321 123667
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
-.+.|+|||++++...+...... ... +. ............+++++..++++.| |++...+.+
T Consensus 139 ~~~~L~pgG~l~i~~~~~~~~~~--~~~----~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 139 IKRVLKSDGYACIAILGPTAKPR--ENS----YP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp HHHHEEEEEEEEEEEECTTCGGG--GGG----GG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred HHHHhCCCeEEEEEEcCCcchhh--hhh----hh-----------hhccccccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 78999999999999987652211 000 00 0111233556689999999999999 999888755
Q ss_pred e
Q 044727 302 H 302 (380)
Q Consensus 302 ~ 302 (380)
.
T Consensus 201 ~ 201 (242)
T 3l8d_A 201 Y 201 (242)
T ss_dssp E
T ss_pred c
Confidence 3
No 29
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.89 E-value=6.6e-09 Score=95.93 Aligned_cols=165 Identities=16% Similarity=0.209 Sum_probs=96.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.. .. + -+|+..|+.. ......+.... ...-.|
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~--------~~-------~-~~v~~vD~s~-----------~~~~~a~~~~~--~~~~~~ 94 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAE--------HG-------A-KKVLGIDLSE-----------RMLTEAKRKTT--SPVVCY 94 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------TT-------C-SEEEEEESCH-----------HHHHHHHHHCC--CTTEEE
T ss_pred CCCEEEEECCCCCHHHHHHHH--------cC-------C-CEEEEEECCH-----------HHHHHHHHhhc--cCCeEE
Confidence 468999999999988777622 11 2 2888888742 11111111110 002234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|+++++.++||+.+. ..+|+.
T Consensus 95 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~~ 130 (253)
T 3g5l_A 95 ---EQKAIEDIAIEPDAYNVVLSSLALHYIASF-----------------------------------------DDICKK 130 (253)
T ss_dssp ---EECCGGGCCCCTTCEEEEEEESCGGGCSCH-----------------------------------------HHHHHH
T ss_pred ---EEcchhhCCCCCCCeEEEEEchhhhhhhhH-----------------------------------------HHHHHH
Confidence 447777777889999999999999997321 223677
Q ss_pred HHHHhccCceEEEEeccCCCcch--hHH--HH----HHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCce
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHT--GVF--EL----MGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSF 293 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~--~~~--~~----l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF 293 (380)
-.+.|+|||++++++..+..... ..| +. +...+.....++.... .+..-....|.++.+|+..++++.| |
T Consensus 131 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~l~~aG-F 208 (253)
T 3g5l_A 131 VYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTS-HFLGEDVQKYHRTVTTYIQTLLKNG-F 208 (253)
T ss_dssp HHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEE-EETTEEEEEECCCHHHHHHHHHHTT-E
T ss_pred HHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEE-eeccccCccEecCHHHHHHHHHHcC-C
Confidence 78999999999998764320000 000 00 0000000001111000 0111145567789999999999999 9
Q ss_pred eEeEEEEE
Q 044727 294 NIHQLETS 301 (380)
Q Consensus 294 ~I~~~e~~ 301 (380)
++..++..
T Consensus 209 ~~~~~~e~ 216 (253)
T 3g5l_A 209 QINSVIEP 216 (253)
T ss_dssp EEEEEECC
T ss_pred eeeeeecC
Confidence 99887644
No 30
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.88 E-value=2.9e-08 Score=90.68 Aligned_cols=145 Identities=16% Similarity=0.161 Sum_probs=95.6
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
+.+|+|+|||+|..+..+.. +..+|+..|+.. ......+.... .....--+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~-----------~~~~~a~~~~~-~~~~~~~v 117 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS-----------------PERFVVGLDISE-----------SALAKANETYG-SSPKAEYF 117 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB-----------------TTEEEEEECSCH-----------HHHHHHHHHHT-TSGGGGGE
T ss_pred CCCEEEeCCCCCHHHHHHHh-----------------CCCeEEEEECCH-----------HHHHHHHHHhh-ccCCCcce
Confidence 46999999999999887611 347889989842 11111111100 00000112
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
.-+.+++.. +.|+.++|+++++.++||+. .. |...+|+.-
T Consensus 118 ~~~~~d~~~-~~~~~~fD~v~~~~~l~~~~---~~------------------------------------~~~~~l~~~ 157 (235)
T 3lcc_A 118 SFVKEDVFT-WRPTELFDLIFDYVFFCAIE---PE------------------------------------MRPAWAKSM 157 (235)
T ss_dssp EEECCCTTT-CCCSSCEEEEEEESSTTTSC---GG------------------------------------GHHHHHHHH
T ss_pred EEEECchhc-CCCCCCeeEEEEChhhhcCC---HH------------------------------------HHHHHHHHH
Confidence 225578754 55788999999999999963 11 233457777
Q ss_pred HHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEEe
Q 044727 223 SEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETSH 302 (380)
Q Consensus 223 a~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~ 302 (380)
.+.|+|||++++..+..... ...|.|..+.+|+..+++..| |++..++...
T Consensus 158 ~~~LkpgG~l~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 208 (235)
T 3lcc_A 158 YELLKPDGELITLMYPITDH----------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEENP 208 (235)
T ss_dssp HHHEEEEEEEEEEECCCSCC----------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEECT
T ss_pred HHHCCCCcEEEEEEeccccc----------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEecC
Confidence 89999999999987654311 122445689999999999999 9999888765
Q ss_pred ecC
Q 044727 303 ISW 305 (380)
Q Consensus 303 ~~~ 305 (380)
...
T Consensus 209 ~~~ 211 (235)
T 3lcc_A 209 HAI 211 (235)
T ss_dssp TCC
T ss_pred Ccc
Confidence 443
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.88 E-value=2.4e-08 Score=92.05 Aligned_cols=151 Identities=13% Similarity=0.031 Sum_probs=90.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... ..+++..|+.. ++-...+ .... ..+.. ..-.|
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~----------------~~~v~gvD~s~-~~l~~a~------~~~~-~~~~~-~~v~~ 90 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH----------------GITGTGIDMSS-LFTAQAK------RRAE-ELGVS-ERVHF 90 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT----------------CCEEEEEESCH-HHHHHHH------HHHH-HTTCT-TTEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc----------------CCeEEEEeCCH-HHHHHHH------HHHH-hcCCC-cceEE
Confidence 35799999999999888773321 25778888742 1111100 0011 11100 01233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+ ++++|+++|..++|++.+.+. +|+.
T Consensus 91 ---~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~-----------------------------------------~l~~ 125 (256)
T 1nkv_A 91 ---IHNDAAGYVA-NEKCDVAACVGATWIAGGFAG-----------------------------------------AEEL 125 (256)
T ss_dssp ---EESCCTTCCC-SSCEEEEEEESCGGGTSSSHH-----------------------------------------HHHH
T ss_pred ---EECChHhCCc-CCCCCEEEECCChHhcCCHHH-----------------------------------------HHHH
Confidence 4478866555 899999999999999654222 2556
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-.+.|||||++++.......... ...+. . .... .....+++.+++...+++.| |++..++.
T Consensus 126 ~~r~LkpgG~l~~~~~~~~~~~~--~~~~~---~-----~~~~-------~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 186 (256)
T 1nkv_A 126 LAQSLKPGGIMLIGEPYWRQLPA--TEEIA---Q-----ACGV-------SSTSDFLTLPGLVGAFDDLG-YDVVEMVL 186 (256)
T ss_dssp HTTSEEEEEEEEEEEEEETTCCS--SHHHH---H-----TTTC-------SCGGGSCCHHHHHHHHHTTT-BCCCEEEE
T ss_pred HHHHcCCCeEEEEecCcccCCCC--hHHHH---H-----HHhc-------ccccccCCHHHHHHHHHHCC-CeeEEEEe
Confidence 68899999999998764331110 00111 1 1110 11125689999999999999 98876553
No 32
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.87 E-value=7.4e-07 Score=85.14 Aligned_cols=156 Identities=13% Similarity=0.145 Sum_probs=92.5
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..+..+.... ..+|+..|+.. ......+. ..+.. ..
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~----------------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~-~~ 141 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF----------------DVNVIGLTLSK-----------NQHARCEQVLASIDTN-RS 141 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------CCEEEEEESCH-----------HHHHHHHHHHHTSCCS-SC
T ss_pred CcCEEEEEcccchHHHHHHHHHC----------------CCEEEEEECCH-----------HHHHHHHHHHHhcCCC-Cc
Confidence 34799999999999887763322 15788888742 11111111 11100 01
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +.+++.. + | +++|++++..++|++.. . |...+
T Consensus 142 v~~---~~~d~~~-~-~-~~fD~v~~~~~l~~~~~---~------------------------------------~~~~~ 176 (318)
T 2fk8_A 142 RQV---LLQGWED-F-A-EPVDRIVSIEAFEHFGH---E------------------------------------NYDDF 176 (318)
T ss_dssp EEE---EESCGGG-C-C-CCCSEEEEESCGGGTCG---G------------------------------------GHHHH
T ss_pred eEE---EECChHH-C-C-CCcCEEEEeChHHhcCH---H------------------------------------HHHHH
Confidence 123 3466633 2 4 89999999999999632 1 23345
Q ss_pred HHHHHHHhccCceEEEEeccCCCcch----h-HHHHHHHHHHHHHHccCcccccccccccC-cccCCHHHHHHHHHhcCc
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHT----G-VFELMGMVLNDMVYEGLIEVSKLESFHFP-MYNPCVEEVRQVIEREGS 292 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~----~-~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~Y~ps~eE~~~~ie~~Gs 292 (380)
|+.-.+.|+|||++++..+....... . -...-...+.+...+ ...| .+.|+.+|+...+++.|
T Consensus 177 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG- 245 (318)
T 2fk8_A 177 FKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG- 245 (318)
T ss_dssp HHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-
T ss_pred HHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-
Confidence 77778999999999999987652110 0 000000111111111 1123 46679999999999999
Q ss_pred eeEeEEEEE
Q 044727 293 FNIHQLETS 301 (380)
Q Consensus 293 F~I~~~e~~ 301 (380)
|++..++.+
T Consensus 246 f~~~~~~~~ 254 (318)
T 2fk8_A 246 FTVPEPLSL 254 (318)
T ss_dssp CBCCCCEEC
T ss_pred CEEEEEEec
Confidence 998776544
No 33
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.85 E-value=1.8e-08 Score=92.57 Aligned_cols=146 Identities=15% Similarity=0.133 Sum_probs=94.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... ..+|+..|+.. ......+.... ....-.|
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~----------------~~~v~~vD~s~-----------~~~~~a~~~~~-~~~~~~~ 144 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL----------------YATTDLLEPVK-----------HMLEEAKRELA-GMPVGKF 144 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH----------------CSEEEEEESCH-----------HHHHHHHHHTT-TSSEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHhh----------------cCEEEEEeCCH-----------HHHHHHHHHhc-cCCceEE
Confidence 46899999999999888774321 14677778632 11111111111 0001123
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|+++++.++|++++ .|+..+|+.
T Consensus 145 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------------~~~~~~l~~ 182 (254)
T 1xtp_A 145 ---ILASMETATLPPNTYDLIVIQWTAIYLTD---------------------------------------ADFVKFFKH 182 (254)
T ss_dssp ---EESCGGGCCCCSSCEEEEEEESCGGGSCH---------------------------------------HHHHHHHHH
T ss_pred ---EEccHHHCCCCCCCeEEEEEcchhhhCCH---------------------------------------HHHHHHHHH
Confidence 44777776788999999999999999532 134455888
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
-.+.|+|||++++......... . +.....+.+.++.+++..++++.| |++.+.+..
T Consensus 183 ~~~~LkpgG~l~i~~~~~~~~~------------------~-----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 183 CQQALTPNGYIFFKENCSTGDR------------------F-----LVDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp HHHHEEEEEEEEEEEEBC--CC------------------E-----EEETTTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred HHHhcCCCeEEEEEecCCCccc------------------c-----eecccCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 8999999999999885332111 0 001123445689999999999999 998877654
No 34
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.83 E-value=1e-08 Score=92.49 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=96.6
Q ss_pred HHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchH
Q 044727 46 PLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFY 125 (380)
Q Consensus 46 ~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~ 125 (380)
|.+.+.+..+.. +...+|+|+|||+|.++..+.+ + ..+|+..|+.. .++
T Consensus 9 ~~l~~~~~~l~~---~~~~~vLD~GCG~G~~~~~la~--------~---------g~~V~gvD~S~----------~~l- 57 (203)
T 1pjz_A 9 KDLQQYWSSLNV---VPGARVLVPLCGKSQDMSWLSG--------Q---------GYHVVGAELSE----------AAV- 57 (203)
T ss_dssp HHHHHHHHHHCC---CTTCEEEETTTCCSHHHHHHHH--------H---------CCEEEEEEECH----------HHH-
T ss_pred HHHHHHHHhccc---CCCCEEEEeCCCCcHhHHHHHH--------C---------CCeEEEEeCCH----------HHH-
Confidence 444444444322 3457999999999999987732 1 25788888853 111
Q ss_pred HHhhhhcCC-------------CCCCcceeeccCCCcccCCCCC-CccceEEcccccccccCCCccccccCCCCCCCCcc
Q 044727 126 ERLKTERGH-------------DDFGSCFIAAAPGSFHGRLFPP-CFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRD 191 (380)
Q Consensus 126 ~~~~~~~~~-------------~~~~~~f~~~vpgSFy~~l~p~-~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~ 191 (380)
...+...+. ...+-.|. -|++....+++ +++|++++..++|++. ..
T Consensus 58 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~d~~~l~~~~~~~fD~v~~~~~l~~l~---~~-------------- 117 (203)
T 1pjz_A 58 ERYFTERGEQPHITSQGDFKVYAAPGIEIW---CGDFFALTARDIGHCAAFYDRAAMIALP---AD-------------- 117 (203)
T ss_dssp HHHHHHHCSCSEEEEETTEEEEECSSSEEE---EECCSSSTHHHHHSEEEEEEESCGGGSC---HH--------------
T ss_pred HHHHHHccCCcccccccccccccCCccEEE---ECccccCCcccCCCEEEEEECcchhhCC---HH--------------
Confidence 111111100 00022343 37886666665 8999999999999953 21
Q ss_pred EEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCccccccccc
Q 044727 192 VCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESF 271 (380)
Q Consensus 192 i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f 271 (380)
|...+|+.-++.|||||++++.+..... + ..
T Consensus 118 ----------------------~~~~~l~~~~r~LkpgG~~~l~~~~~~~-------------------~--------~~ 148 (203)
T 1pjz_A 118 ----------------------MRERYVQHLEALMPQACSGLLITLEYDQ-------------------A--------LL 148 (203)
T ss_dssp ----------------------HHHHHHHHHHHHSCSEEEEEEEEESSCS-------------------S--------SS
T ss_pred ----------------------HHHHHHHHHHHHcCCCcEEEEEEEecCc-------------------c--------cc
Confidence 2234577779999999996665542210 0 01
Q ss_pred ccCcccCCHHHHHHHHHhcCceeEeEEEEEee
Q 044727 272 HFPMYNPCVEEVRQVIEREGSFNIHQLETSHI 303 (380)
Q Consensus 272 ~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~~ 303 (380)
.-|.+..+.+|++..++. | |++..++..+.
T Consensus 149 ~~~~~~~~~~el~~~~~~-g-f~i~~~~~~~~ 178 (203)
T 1pjz_A 149 EGPPFSVPQTWLHRVMSG-N-WEVTKVGGQDT 178 (203)
T ss_dssp SSCCCCCCHHHHHHTSCS-S-EEEEEEEESSC
T ss_pred CCCCCCCCHHHHHHHhcC-C-cEEEEeccccc
Confidence 224445789999999998 8 99988876543
No 35
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.83 E-value=1.1e-08 Score=91.31 Aligned_cols=160 Identities=11% Similarity=0.046 Sum_probs=94.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
++.+|+|+|||+|..+..+... +..+++..|+.. +. +........ ..+ ...+-.|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~----------------~~~~v~~~D~s~-~~------~~~a~~~~~-~~~-~~~~~~~ 97 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ----------------SDFSIRALDFSK-HM------NEIALKNIA-DAN-LNDRIQI 97 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH----------------SEEEEEEEESCH-HH------HHHHHHHHH-HTT-CTTTEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc----------------CCCeEEEEECCH-HH------HHHHHHHHH-hcc-ccCceEE
Confidence 3449999999999988776321 347899999732 00 000001111 111 0001234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|++++..++||+.+. ..+|+.
T Consensus 98 ---~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~-----------------------------------------~~~l~~ 133 (219)
T 3dlc_A 98 ---VQGDVHNIPIEDNYADLIVSRGSVFFWEDV-----------------------------------------ATAFRE 133 (219)
T ss_dssp ---EECBTTBCSSCTTCEEEEEEESCGGGCSCH-----------------------------------------HHHHHH
T ss_pred ---EEcCHHHCCCCcccccEEEECchHhhccCH-----------------------------------------HHHHHH
Confidence 447787777899999999999999996221 123667
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-.+.|+|||++++...-..+ ...+.+...+... ..-... .+.......+.+|+..++++.| |++.++..
T Consensus 134 ~~~~L~pgG~l~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~~ 202 (219)
T 3dlc_A 134 IYRILKSGGKTYIGGGFGNK---ELRDSISAEMIRK---NPDWKE---FNRKNISQENVERFQNVLDEIG-ISSYEIIL 202 (219)
T ss_dssp HHHHEEEEEEEEEEECCSSH---HHHHHHHHHHHHH---CTTHHH---HHHHHSSHHHHHHHHHHHHHHT-CSSEEEEE
T ss_pred HHHhCCCCCEEEEEeccCcH---HHHHHHHHHHHHh---HHHHHh---hhhhccccCCHHHHHHHHHHcC-CCeEEEEe
Confidence 78999999999998643321 1222222222221 100010 1111223348899999999999 98776653
No 36
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.82 E-value=3.3e-08 Score=89.83 Aligned_cols=153 Identities=13% Similarity=0.108 Sum_probs=93.6
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..+..+. +. ..+|+..|+.. ......+.... . +-.|
T Consensus 43 ~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~-----------~~~~~a~~~~~-~--~v~~- 90 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQ--------EH---------FNDITCVEASE-----------EAISHAQGRLK-D--GITY- 90 (250)
T ss_dssp SSCEEEESCTTSHHHHHHT--------TT---------CSCEEEEESCH-----------HHHHHHHHHSC-S--CEEE-
T ss_pred CCcEEEECCCCCHHHHHHH--------Hh---------CCcEEEEeCCH-----------HHHHHHHHhhh-C--CeEE-
Confidence 4689999999999887661 11 12677888732 11111221111 0 1233
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
+.+++.. ++|++++|++++..+||++.+. ..+|+.-
T Consensus 91 --~~~d~~~-~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~~~ 126 (250)
T 2p7i_A 91 --IHSRFED-AQLPRRYDNIVLTHVLEHIDDP-----------------------------------------VALLKRI 126 (250)
T ss_dssp --EESCGGG-CCCSSCEEEEEEESCGGGCSSH-----------------------------------------HHHHHHH
T ss_pred --EEccHHH-cCcCCcccEEEEhhHHHhhcCH-----------------------------------------HHHHHHH
Confidence 3467744 4789999999999999996432 1236666
Q ss_pred H-HHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCccccc-c---cccccCcccCCHHHHHHHHHhcCceeEeE
Q 044727 223 S-EELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSK-L---ESFHFPMYNPCVEEVRQVIEREGSFNIHQ 297 (380)
Q Consensus 223 a-~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~-~---d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~ 297 (380)
+ +.|+|||++++..+...... .... .+ .|.+.... + +....-..+.+.+++..++++.| |++..
T Consensus 127 ~~~~LkpgG~l~i~~~~~~~~~----~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~ 195 (250)
T 2p7i_A 127 NDDWLAEGGRLFLVCPNANAVS----RQIA-VK-----MGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTY 195 (250)
T ss_dssp HHTTEEEEEEEEEEEECTTCHH----HHHH-HH-----TTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred HHHhcCCCCEEEEEcCChHHHH----HHHH-HH-----cCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEE
Confidence 7 89999999999987654221 1111 11 13332210 0 00111224579999999999999 99988
Q ss_pred EEEEe
Q 044727 298 LETSH 302 (380)
Q Consensus 298 ~e~~~ 302 (380)
.+.+.
T Consensus 196 ~~~~~ 200 (250)
T 2p7i_A 196 RSGIF 200 (250)
T ss_dssp EEEEE
T ss_pred EeeeE
Confidence 87654
No 37
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.82 E-value=2.9e-08 Score=89.24 Aligned_cols=154 Identities=12% Similarity=0.083 Sum_probs=95.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+. + . + .+++..|... ......+. . ..-+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~--------~-------~-~-~~~~~~D~~~-----------~~~~~~~~-----~-~~~~ 77 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIK--------E-------N-G-TRVSGIEAFP-----------EAAEQAKE-----K-LDHV 77 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------T-------T-T-CEEEEEESSH-----------HHHHHHHT-----T-SSEE
T ss_pred CCCcEEEeCCCCCHHHHHHH--------h-------c-C-CeEEEEeCCH-----------HHHHHHHH-----h-CCcE
Confidence 45899999999999887661 1 1 3 6788888732 11111111 0 1122
Q ss_pred eeccCCCccc--CCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHG--RLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 142 ~~~vpgSFy~--~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
+.+++.. ..++++++|+++++.++|++.+.. .+|
T Consensus 78 ---~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------------------~~l 113 (230)
T 3cc8_A 78 ---VLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPW-----------------------------------------AVI 113 (230)
T ss_dssp ---EESCTTTCCCCSCTTCEEEEEEESCGGGSSCHH-----------------------------------------HHH
T ss_pred ---EEcchhhcCCCCCCCccCEEEECChhhhcCCHH-----------------------------------------HHH
Confidence 3355543 557889999999999999964311 236
Q ss_pred HHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccc-cccCcccCCHHHHHHHHHhcCceeEeEE
Q 044727 220 KFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLES-FHFPMYNPCVEEVRQVIEREGSFNIHQL 298 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~-f~~P~Y~ps~eE~~~~ie~~GsF~I~~~ 298 (380)
+.-.+.|+|||++++.+....... .+ ..+.. +......... -.....+.+.+|+..++++.| |++..+
T Consensus 114 ~~~~~~L~~gG~l~~~~~~~~~~~-----~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~ 182 (230)
T 3cc8_A 114 EKVKPYIKQNGVILASIPNVSHIS-----VL----APLLA-GNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKV 182 (230)
T ss_dssp HHTGGGEEEEEEEEEEEECTTSHH-----HH----HHHHT-TCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEE
T ss_pred HHHHHHcCCCCEEEEEeCCcchHH-----HH----HHHhc-CCceeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEE
Confidence 677899999999999987653221 11 11111 2111111000 012345679999999999999 999888
Q ss_pred EEEeec
Q 044727 299 ETSHIS 304 (380)
Q Consensus 299 e~~~~~ 304 (380)
+.+..+
T Consensus 183 ~~~~~~ 188 (230)
T 3cc8_A 183 DRVYVD 188 (230)
T ss_dssp EEEECC
T ss_pred EecccC
Confidence 877654
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.80 E-value=4e-08 Score=88.39 Aligned_cols=145 Identities=14% Similarity=0.119 Sum_probs=95.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... .|..+++..|+... . +........ ..+.. +-.|
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~s~~-~------~~~a~~~~~-~~~~~--~~~~ 92 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMV--------------GEKGKVYAIDVQEE-M------VNYAWEKVN-KLGLK--NVEV 92 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHH--------------TTTCEEEEEESCHH-H------HHHHHHHHH-HHTCT--TEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHh--------------CCCcEEEEEECCHH-H------HHHHHHHHH-HcCCC--cEEE
Confidence 35799999999999998874332 14578999997320 0 000001111 11101 1233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....++++++|+++++.++||+.+. ..+|+.
T Consensus 93 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~~ 128 (219)
T 3dh0_A 93 ---LKSEENKIPLPDNTVDFIFMAFTFHELSEP-----------------------------------------LKFLEE 128 (219)
T ss_dssp ---EECBTTBCSSCSSCEEEEEEESCGGGCSSH-----------------------------------------HHHHHH
T ss_pred ---EecccccCCCCCCCeeEEEeehhhhhcCCH-----------------------------------------HHHHHH
Confidence 447777777899999999999999996321 123666
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
-.+.|+|||++++......... .-.......+.+|+...+++.| |++.+.+.+
T Consensus 129 ~~~~LkpgG~l~i~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 181 (219)
T 3dh0_A 129 LKRVAKPFAYLAIIDWKKEERD--------------------------KGPPPEEVYSEWEVGLILEDAG-IRVGRVVEV 181 (219)
T ss_dssp HHHHEEEEEEEEEEEECSSCCS--------------------------SSCCGGGSCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred HHHHhCCCeEEEEEEecccccc--------------------------cCCchhcccCHHHHHHHHHHCC-CEEEEEEee
Confidence 6889999999999877554211 0011223458999999999999 998887654
No 39
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.80 E-value=1.2e-08 Score=95.59 Aligned_cols=97 Identities=19% Similarity=0.080 Sum_probs=67.1
Q ss_pred cCCCcccC-CC---CCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 145 APGSFHGR-LF---PPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 145 vpgSFy~~-l~---p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
+.++..+. ++ +..++|+|+|+++|||+..-+ .|+...|+
T Consensus 139 ~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~-------------------------------------~~~~~~l~ 181 (263)
T 2a14_A 139 LKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSL-------------------------------------DAYRAALC 181 (263)
T ss_dssp EECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSH-------------------------------------HHHHHHHH
T ss_pred EeccccCCCCCCccccCCCCEeeehHHHHHhcCCH-------------------------------------HHHHHHHH
Confidence 34566442 22 357999999999999964321 13444577
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.-++.|||||+|+++.......- . .| .-..+.+..+.+|+...++..| |++..++.
T Consensus 182 ~i~r~LKPGG~li~~~~~~~~~~-~--------------~g--------~~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~ 237 (263)
T 2a14_A 182 NLASLLKPGGHLVTTVTLRLPSY-M--------------VG--------KREFSCVALEKGEVEQAVLDAG-FDIEQLLH 237 (263)
T ss_dssp HHHTTEEEEEEEEEEEESSCCEE-E--------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHHHcCCCcEEEEEEeecCccc-e--------------eC--------CeEeeccccCHHHHHHHHHHCC-CEEEEEee
Confidence 78999999999999975432110 0 11 1124556679999999999999 99998887
Q ss_pred Ee
Q 044727 301 SH 302 (380)
Q Consensus 301 ~~ 302 (380)
..
T Consensus 238 ~~ 239 (263)
T 2a14_A 238 SP 239 (263)
T ss_dssp EC
T ss_pred cc
Confidence 64
No 40
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.80 E-value=8.3e-08 Score=91.00 Aligned_cols=157 Identities=10% Similarity=0.071 Sum_probs=94.0
Q ss_pred ceEEEeecCCC---CccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCc
Q 044727 63 CIRFTDMGCSS---GPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~---G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 139 (380)
.-+|+|+|||+ |..+..+ .+.+ |..+|+..|+.. .++. ..+.... ....-
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~--------~~~~-------p~~~v~~vD~sp----------~~l~-~Ar~~~~-~~~~v 130 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVA--------QSVN-------PDARVVYVDIDP----------MVLT-HGRALLA-KDPNT 130 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHH--------HHHC-------TTCEEEEEESSH----------HHHH-HHHHHHT-TCTTE
T ss_pred CCEEEEECCCCCCCChHHHHH--------HHhC-------CCCEEEEEECCh----------HHHH-HHHHhcC-CCCCe
Confidence 46999999999 9543222 2222 568999999832 1111 1111111 10022
Q ss_pred ceeeccCCCccc-----------CCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHH
Q 044727 140 CFIAAAPGSFHG-----------RLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYL 208 (380)
Q Consensus 140 ~f~~~vpgSFy~-----------~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~ 208 (380)
.| +.+++.. ..++..++|+++++.+|||+.+-
T Consensus 131 ~~---~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~---------------------------------- 173 (274)
T 2qe6_A 131 AV---FTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD---------------------------------- 173 (274)
T ss_dssp EE---EECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT----------------------------------
T ss_pred EE---EEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH----------------------------------
Confidence 34 5577754 23565789999999999997652
Q ss_pred HHHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHH
Q 044727 209 DQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIE 288 (380)
Q Consensus 209 ~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie 288 (380)
+...+|+.-++.|+|||+|+++.+..+. . ..++.+.+.+. . ...|+++++.+|+...+
T Consensus 174 -----~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~-~~~~~~~~~~~---~-----------~~~~~~~~s~~ei~~~l- 231 (274)
T 2qe6_A 174 -----VVDRVVGAYRDALAPGSYLFMTSLVDTG-L-PAQQKLARITR---E-----------NLGEGWARTPEEIERQF- 231 (274)
T ss_dssp -----THHHHHHHHHHHSCTTCEEEEEEEBCSS-C-HHHHHHHHHHH---H-----------HHSCCCCBCHHHHHHTT-
T ss_pred -----HHHHHHHHHHHhCCCCcEEEEEEecCcc-h-HHHHHHHHHHH---h-----------cCCCCccCCHHHHHHHh-
Confidence 1112377778999999999999987643 1 11222211111 1 11367889999999999
Q ss_pred hcCceeEeEEEEEee-cCCc
Q 044727 289 REGSFNIHQLETSHI-SWSV 307 (380)
Q Consensus 289 ~~GsF~I~~~e~~~~-~~~~ 307 (380)
.| |++........ .|.+
T Consensus 232 -~G-~~l~~~g~~~~~~w~p 249 (274)
T 2qe6_A 232 -GD-FELVEPGVVYTALWRP 249 (274)
T ss_dssp -TT-CEECTTCSEEGGGSSC
T ss_pred -CC-CeEccCcEeccccccC
Confidence 47 88776544432 3544
No 41
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.79 E-value=1.4e-07 Score=91.05 Aligned_cols=151 Identities=17% Similarity=0.116 Sum_probs=93.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.+. + |..+++.-|+|. . +..-..... ..+ ....-.|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~--~------~~~a~~~~~-~~~-~~~~v~~ 223 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTA--------H-------EDLSGTVLDLQG--P------ASAAHRRFL-DTG-LSGRAQV 223 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHH--------C-------TTCEEEEEECHH--H------HHHHHHHHH-HTT-CTTTEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHH--------C-------CCCeEEEecCHH--H------HHHHHHhhh-hcC-cCcCeEE
Confidence 4589999999999877766332 2 567788889842 0 000000011 111 0001234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.++|+ ..+|. ++|++++.+.||..++ . +...+|+.
T Consensus 224 ---~~~d~~-~~~p~-~~D~v~~~~vlh~~~~---~------------------------------------~~~~~l~~ 259 (332)
T 3i53_A 224 ---VVGSFF-DPLPA-GAGGYVLSAVLHDWDD---L------------------------------------SAVAILRR 259 (332)
T ss_dssp ---EECCTT-SCCCC-SCSEEEEESCGGGSCH---H------------------------------------HHHHHHHH
T ss_pred ---ecCCCC-CCCCC-CCcEEEEehhhccCCH---H------------------------------------HHHHHHHH
Confidence 568997 56677 8999999999986322 1 23345888
Q ss_pred HHHHhccCceEEEEeccCCCcch-hHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHT-GVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~-~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-++.|+|||++++.-.-.+.... ..++... |+. .....++.+|++.++++.| |++.++..
T Consensus 260 ~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~-----~~~-------------~~~~~~t~~e~~~ll~~aG-f~~~~~~~ 320 (332)
T 3i53_A 260 CAEAAGSGGVVLVIEAVAGDEHAGTGMDLRM-----LTY-------------FGGKERSLAELGELAAQAG-LAVRAAHP 320 (332)
T ss_dssp HHHHHTTTCEEEEEECCCC---CCHHHHHHH-----HHH-------------HSCCCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHhcCCCCEEEEEeecCCCCCccHHHHHHH-----Hhh-------------CCCCCCCHHHHHHHHHHCC-CEEEEEEE
Confidence 89999999999987654331110 2222211 111 1223578999999999999 99877653
No 42
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.79 E-value=2e-08 Score=95.46 Aligned_cols=155 Identities=13% Similarity=0.251 Sum_probs=91.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+...+ .+..+|+..|+.. .+-...+ .......+ ...+-.|
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~--------------~~~~~v~gvD~s~-~~~~~a~------~~~~~~~~-~~~~v~~ 93 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQEL--------------KPFEQIIGSDLSA-TMIKTAE------VIKEGSPD-TYKNVSF 93 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHS--------------SCCSEEEEEESCH-HHHHHHH------HHHHHCC--CCTTEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC--------------CCCCEEEEEeCCH-HHHHHHH------HHHHhccC-CCCceEE
Confidence 46899999999999988874321 1357899999842 0000000 00111000 0112234
Q ss_pred eeccCCCcccCCCCC------CccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPP------CFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDF 215 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~------~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~ 215 (380)
+.+++.+..++. +++|+++++.++||+ +.+
T Consensus 94 ---~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~---------------------------------------- 129 (299)
T 3g5t_A 94 ---KISSSDDFKFLGADSVDKQKIDMITAVECAHWF-DFE---------------------------------------- 129 (299)
T ss_dssp ---EECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-CHH----------------------------------------
T ss_pred ---EEcCHHhCCccccccccCCCeeEEeHhhHHHHh-CHH----------------------------------------
Confidence 346776656676 899999999999997 211
Q ss_pred HHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCccc-CCHHHHHHHHHhcCcee
Q 044727 216 TSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYN-PCVEEVRQVIEREGSFN 294 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~-ps~eE~~~~ie~~GsF~ 294 (380)
.+|+.-.+.|+|||+|++...+...... ...+...+.++... + ...-|++. |..+.++..++..| |.
T Consensus 130 -~~l~~~~~~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~~~~~~----~----~~~~~~w~~p~~~~~~~~l~~~g-fp 197 (299)
T 3g5t_A 130 -KFQRSAYANLRKDGTIAIWGYADPIFPD--YPEFDDLMIEVPYG----K----QGLGPYWEQPGRSRLRNMLKDSH-LD 197 (299)
T ss_dssp -HHHHHHHHHEEEEEEEEEEEEEEEECTT--CGGGTTHHHHHHHC----T----TTTGGGSCTTHHHHHHTTTTTCC-CC
T ss_pred -HHHHHHHHhcCCCcEEEEEecCCccccC--cHHHHHHHHHhccC----c----ccccchhhchhhHHHHHhhhccC-CC
Confidence 2366668899999999997665431100 00111223333221 1 12345554 88888999999888 63
No 43
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.78 E-value=5.9e-07 Score=83.59 Aligned_cols=168 Identities=8% Similarity=-0.017 Sum_probs=94.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCC-Cc-
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDF-GS- 139 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~-~~- 139 (380)
...+|+|+|||+|..+..+.... + |..+|+..|+....+-+ |......+........ ++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~-----------g---~~~~v~gvD~s~~~~~~-----~~~~~~a~~~~~~~~~~~~v 103 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQV-----------G---SSGHVTGIDIASPDYGA-----PLTLGQAWNHLLAGPLGDRL 103 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-----------C---TTCEEEEECSSCTTCCS-----SSCHHHHHHHHHTSTTGGGE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh-----------C---CCCEEEEEECCcccccc-----HHHHHHHHHHHHhcCCCCce
Confidence 35799999999999988773322 1 44789999985421000 0011111110000000 11
Q ss_pred ceeeccCCC-cc--cCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGS-FH--GRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 140 ~f~~~vpgS-Fy--~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
.| +.++ +. ...+|++++|+++|..++|++.+.+
T Consensus 104 ~~---~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~----------------------------------------- 139 (275)
T 3bkx_A 104 TV---HFNTNLSDDLGPIADQHFDRVVLAHSLWYFASAN----------------------------------------- 139 (275)
T ss_dssp EE---ECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHH-----------------------------------------
T ss_pred EE---EECChhhhccCCCCCCCEEEEEEccchhhCCCHH-----------------------------------------
Confidence 22 3455 32 3346789999999999999964421
Q ss_pred HHHHHHHHHhccCceEEEEeccCCC-cch---hHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCc
Q 044727 217 SFLKFRSEELKTEGRMVLNFIGNDK-YHT---GVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGS 292 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g~~~-~~~---~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~Gs 292 (380)
.+++...+-++|||++++....... ... ..+..+.+...... + . +........++++++...+++.|
T Consensus 140 ~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~---~~~~~~~~~~s~~~l~~~l~~aG- 210 (275)
T 3bkx_A 140 ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAI--A---P---SDVANIRTLITPDTLAQIAHDNT- 210 (275)
T ss_dssp HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHH--S---C---CTTCSCCCCCCHHHHHHHHHHHT-
T ss_pred HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhc--c---c---cccccccccCCHHHHHHHHHHCC-
Confidence 1244444555669999999887642 111 12222211111110 0 0 11233446799999999999999
Q ss_pred eeEeEEEEE
Q 044727 293 FNIHQLETS 301 (380)
Q Consensus 293 F~I~~~e~~ 301 (380)
|++.+.+.+
T Consensus 211 f~~~~~~~~ 219 (275)
T 3bkx_A 211 WTYTAGTIV 219 (275)
T ss_dssp CEEEECCCB
T ss_pred CeeEEEEEe
Confidence 999888766
No 44
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.78 E-value=1.7e-07 Score=87.92 Aligned_cols=160 Identities=15% Similarity=0.169 Sum_probs=97.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhh---cCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTE---RGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~---~~~~~~~ 138 (380)
...+|+|+|||+|..+..+.. . +..+++..|+.. ......+.. .+ ...+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~--------~--------~~~~v~gvD~s~-----------~~~~~a~~~~~~~~-~~~~ 115 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYER--------A--------GIGEYYGVDIAE-----------VSINDARVRARNMK-RRFK 115 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHH--------H--------TCSEEEEEESCH-----------HHHHHHHHHHHTSC-CSSE
T ss_pred CCCeEEEECCCCCHHHHHHHH--------C--------CCCEEEEEECCH-----------HHHHHHHHHHHhcC-CCcc
Confidence 457999999999998876521 1 225888888743 111111111 11 0001
Q ss_pred cceeeccCCCcccCCC-CCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLF-PPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~-p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
-.| +.+++....+ +++++|++++..++||+-.- ..|...
T Consensus 116 v~~---~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~-------------------------------------~~~~~~ 155 (298)
T 1ri5_A 116 VFF---RAQDSYGRHMDLGKEFDVISSQFSFHYAFST-------------------------------------SESLDI 155 (298)
T ss_dssp EEE---EESCTTTSCCCCSSCEEEEEEESCGGGGGSS-------------------------------------HHHHHH
T ss_pred EEE---EECCccccccCCCCCcCEEEECchhhhhcCC-------------------------------------HHHHHH
Confidence 133 4467766666 68999999999999995210 024455
Q ss_pred HHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccc----ccc-------------------cc-cc
Q 044727 218 FLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVS----KLE-------------------SF-HF 273 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e----~~d-------------------~f-~~ 273 (380)
+|+.-++.|+|||++++.++... .++..+ . . +.+... .++ .. ..
T Consensus 156 ~l~~~~~~LkpgG~l~~~~~~~~----~~~~~~----~---~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 223 (298)
T 1ri5_A 156 AQRNIARHLRPGGYFIMTVPSRD----VILERY----K---Q-GRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNC 223 (298)
T ss_dssp HHHHHHHTEEEEEEEEEEEECHH----HHHHHH----H---H-TCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSE
T ss_pred HHHHHHHhcCCCCEEEEEECCHH----HHHHHH----c---c-CccCCeeEEEEeCccccccccccceEEEEEchhhcCC
Confidence 68888999999999999986442 111111 1 1 111110 000 00 23
Q ss_pred CcccCCHHHHHHHHHhcCceeEeEEEEEe
Q 044727 274 PMYNPCVEEVRQVIEREGSFNIHQLETSH 302 (380)
Q Consensus 274 P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~ 302 (380)
|.++.+++|++.++++.| |++...+.+.
T Consensus 224 ~~~~~~~~~l~~ll~~aG-f~~v~~~~~~ 251 (298)
T 1ri5_A 224 IEYFVDFTRMVDGFKRLG-LSLVERKGFI 251 (298)
T ss_dssp EEECCCHHHHHHHHHTTT-EEEEEEEEHH
T ss_pred cccccCHHHHHHHHHHcC-CEEEEecCHH
Confidence 346789999999999999 9988776553
No 45
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.78 E-value=2e-08 Score=96.19 Aligned_cols=147 Identities=12% Similarity=-0.023 Sum_probs=95.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+.... ..+|+..|+.. ......+. ..+.. ..
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~----------------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~-~~ 168 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF----------------GSRVEGVTLSA-----------AQADFGNRRARELRID-DH 168 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------CCEEEEEESCH-----------HHHHHHHHHHHHTTCT-TT
T ss_pred CCCEEEEecCCCCHHHHHHHHHc----------------CCEEEEEeCCH-----------HHHHHHHHHHHHcCCC-Cc
Confidence 35799999999999988774321 26788888742 11111111 11100 01
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +.+++....+|++++|++++..++||+. +. .+
T Consensus 169 v~~---~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~----------------------------------------~~ 203 (312)
T 3vc1_A 169 VRS---RVCNMLDTPFDKGAVTASWNNESTMYVD--LH----------------------------------------DL 203 (312)
T ss_dssp EEE---EECCTTSCCCCTTCEEEEEEESCGGGSC--HH----------------------------------------HH
T ss_pred eEE---EECChhcCCCCCCCEeEEEECCchhhCC--HH----------------------------------------HH
Confidence 234 4478877678999999999999999973 11 12
Q ss_pred HHHHHHHhccCceEEEEeccCCCcc-h--hHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeE
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYH-T--GVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNI 295 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~-~--~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I 295 (380)
|+.-.+.|+|||++++......... . ..++.+ ... ..| ..++.+++..++++.| |++
T Consensus 204 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~----~~~--------------~~~-~~~s~~~~~~~l~~aG-f~~ 263 (312)
T 3vc1_A 204 FSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQI----NAH--------------FEC-NIHSRREYLRAMADNR-LVP 263 (312)
T ss_dssp HHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHH----HHH--------------HTC-CCCBHHHHHHHHHTTT-EEE
T ss_pred HHHHHHHcCCCcEEEEEEccccccccchhHHHHHH----Hhh--------------hcC-CCCCHHHHHHHHHHCC-CEE
Confidence 6666899999999999987655211 1 222222 110 111 3788999999999999 998
Q ss_pred eEEEEE
Q 044727 296 HQLETS 301 (380)
Q Consensus 296 ~~~e~~ 301 (380)
..++.+
T Consensus 264 ~~~~~~ 269 (312)
T 3vc1_A 264 HTIVDL 269 (312)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 887754
No 46
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.77 E-value=4.1e-08 Score=95.75 Aligned_cols=153 Identities=14% Similarity=0.059 Sum_probs=94.4
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
+...+|+|+|||+|..+..+.... |..+++.-|+|.- +-+... ...+ ...+-.
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~---------------p~~~~~~~D~~~~----~~~~~~-------~~~~-~~~~v~ 235 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREH---------------PGLQGVLLDRAEV----VARHRL-------DAPD-VAGRWK 235 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHC---------------TTEEEEEEECHHH----HTTCCC-------CCGG-GTTSEE
T ss_pred cCCceEEEECCccCHHHHHHHHHC---------------CCCEEEEecCHHH----hhcccc-------cccC-CCCCeE
Confidence 346899999999999888774332 5688999998531 001000 0000 000113
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +.|+|+ ..+| ++|+++++++||.+++ . +...+|+
T Consensus 236 ~---~~~d~~-~~~p--~~D~v~~~~vlh~~~d---~------------------------------------~~~~~L~ 270 (348)
T 3lst_A 236 V---VEGDFL-REVP--HADVHVLKRILHNWGD---E------------------------------------DSVRILT 270 (348)
T ss_dssp E---EECCTT-TCCC--CCSEEEEESCGGGSCH---H------------------------------------HHHHHHH
T ss_pred E---EecCCC-CCCC--CCcEEEEehhccCCCH---H------------------------------------HHHHHHH
Confidence 3 669997 5667 9999999999986332 1 2234588
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.-++.|+|||++++.-.-.+......+....+. .-++. ..-..++.+|+++++++.| |++.++..
T Consensus 271 ~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~-~~~~~-------------~~~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 271 NCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDF-MMLAA-------------RTGQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp HHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHH-HHHHT-------------TSCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHHhcCCCCEEEEEEeccCCCCCcchhhhcCh-hhhhc-------------CCCcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 889999999999987654331111111111111 11111 1123578999999999999 99887764
No 47
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.76 E-value=1.5e-08 Score=97.14 Aligned_cols=167 Identities=14% Similarity=0.157 Sum_probs=96.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhc--CC--CCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTER--GH--DDF 137 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~--~~--~~~ 137 (380)
.+.+|+|+|||+|..+..+.. . +..+++..|+... .+........... .. ...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~--------~--------~~~~v~gvD~s~~-------~l~~a~~~~~~~~~~~~~~~~~ 90 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKK--------G--------RINKLVCTDIADV-------SVKQCQQRYEDMKNRRDSEYIF 90 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHH--------T--------TCSEEEEEESCHH-------HHHHHHHHHHHHHSSSCC-CCC
T ss_pred CCCEEEEECCCCcHHHHHHHh--------c--------CCCEEEEEeCCHH-------HHHHHHHHHHHhhhcccccccc
Confidence 467999999999998876632 1 2368888887431 0000001111000 00 000
Q ss_pred CcceeeccCCCcccCC----CC--CCccceEEcccccccc-cCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHH
Q 044727 138 GSCFIAAAPGSFHGRL----FP--PCFLNLVYSSFCLHWL-SRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQ 210 (380)
Q Consensus 138 ~~~f~~~vpgSFy~~l----~p--~~svdl~~Ss~alhWl-s~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q 210 (380)
.-.| +.++..... ++ ++++|+++|+.++||+ .+.
T Consensus 91 ~~~~---~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~------------------------------------ 131 (313)
T 3bgv_A 91 SAEF---ITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESY------------------------------------ 131 (313)
T ss_dssp EEEE---EECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSH------------------------------------
T ss_pred eEEE---EEecccccchhhhcccCCCCEEEEEEecchhhccCCH------------------------------------
Confidence 1133 336665443 54 4599999999999997 221
Q ss_pred HHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHc--c-------Ccccccc------------c
Q 044727 211 FEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYE--G-------LIEVSKL------------E 269 (380)
Q Consensus 211 ~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~e--G-------~i~~e~~------------d 269 (380)
.|...+|+.-++.|+|||++++++++.. . +.+.|...-.+ | ..+.+++ .
T Consensus 132 --~~~~~~l~~~~~~LkpgG~li~~~~~~~----~----l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~ 201 (313)
T 3bgv_A 132 --EQADMMLRNACERLSPGGYFIGTTPNSF----E----LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEG 201 (313)
T ss_dssp --HHHHHHHHHHHTTEEEEEEEEEEEECHH----H----HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC-
T ss_pred --HHHHHHHHHHHHHhCCCcEEEEecCChH----H----HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECC
Confidence 1334557888999999999999998652 1 11122211000 0 0011111 2
Q ss_pred ccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 270 SFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 270 ~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
....|.|..+.+++.+++++.| |++...+.|
T Consensus 202 ~~~~~~~~~~~~~~~~l~~~~G-~~~v~~~~f 232 (313)
T 3bgv_A 202 VVDVPEFLVYFPLLNEMAKKYN-MKLVYKKTF 232 (313)
T ss_dssp --CCEEECCCHHHHHHHGGGGT-EEEEEEEEH
T ss_pred cccCcceEEcHHHHHHHHHHcC-cEEEEecCH
Confidence 2345677889999999999999 998877654
No 48
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.74 E-value=1.9e-07 Score=91.89 Aligned_cols=155 Identities=19% Similarity=0.173 Sum_probs=95.2
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
....+|+|+|||+|..+..+... + |..+++.-|+|. . +........ ..+ ....-.
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~--~------~~~a~~~~~-~~~-l~~~v~ 255 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDA--------F-------PGLRGTLLERPP--V------AEEARELLT-GRG-LADRCE 255 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH--------C-------TTCEEEEEECHH--H------HHHHHHHHH-HTT-CTTTEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHH--------C-------CCCeEEEEcCHH--H------HHHHHHhhh-hcC-cCCceE
Confidence 34689999999999877766332 2 568889999842 0 000000011 111 000123
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +.|+|+ ..+|. ++|++++.+.||+.++ . +...+|+
T Consensus 256 ~---~~~d~~-~~~p~-~~D~v~~~~vlh~~~d---~------------------------------------~~~~~L~ 291 (369)
T 3gwz_A 256 I---LPGDFF-ETIPD-GADVYLIKHVLHDWDD---D------------------------------------DVVRILR 291 (369)
T ss_dssp E---EECCTT-TCCCS-SCSEEEEESCGGGSCH---H------------------------------------HHHHHHH
T ss_pred E---eccCCC-CCCCC-CceEEEhhhhhccCCH---H------------------------------------HHHHHHH
Confidence 4 569998 66777 8999999999998432 1 1224588
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.-++.|+|||++++.-.-.++..... ....+ +.-|+..| -..++.+|++.++++.| |++.++..
T Consensus 292 ~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d-~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~~~ 355 (369)
T 3gwz_A 292 RIATAMKPDSRLLVIDNLIDERPAAS-TLFVD-LLLLVLVG-------------GAERSESEFAALLEKSG-LRVERSLP 355 (369)
T ss_dssp HHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHH-HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEEEEE
T ss_pred HHHHHcCCCCEEEEEEeccCCCCCCc-hhHhh-HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEEEEE
Confidence 88999999999999765444221111 11111 11121111 23478999999999999 99887753
No 49
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.74 E-value=1.6e-07 Score=92.49 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=94.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... |..+++..|+|. ...... ...+-.|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~---------------p~~~~~~~D~~~-----~~~~a~------------~~~~v~~ 248 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHY---------------PTIKGVNFDLPH-----VISEAP------------QFPGVTH 248 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC---------------TTCEEEEEECHH-----HHTTCC------------CCTTEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHC---------------CCCeEEEecCHH-----HHHhhh------------hcCCeEE
Confidence 45899999999999888774332 668899999853 111111 0002234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
++|+|++ .+|.. |+++++++||..++ . |...+|+.
T Consensus 249 ---~~~D~~~-~~p~~--D~v~~~~vlh~~~d---~------------------------------------~~~~~L~~ 283 (364)
T 3p9c_A 249 ---VGGDMFK-EVPSG--DTILMKWILHDWSD---Q------------------------------------HCATLLKN 283 (364)
T ss_dssp ---EECCTTT-CCCCC--SEEEEESCGGGSCH---H------------------------------------HHHHHHHH
T ss_pred ---EeCCcCC-CCCCC--CEEEehHHhccCCH---H------------------------------------HHHHHHHH
Confidence 6699987 78875 99999999985321 1 23445888
Q ss_pred HHHHhccCceEEEEeccCC--CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEE
Q 044727 222 RSEELKTEGRMVLNFIGND--KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLE 299 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~--~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e 299 (380)
-++.|+|||++++.-.-.+ +........ ..+.++..-. .+..-..++.+|+++++++.| |++.++.
T Consensus 284 ~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~--~~~~d~~m~~---------~~~~g~~rt~~e~~~ll~~AG-F~~v~~~ 351 (364)
T 3p9c_A 284 CYDALPAHGKVVLVQCILPVNPEANPSSQG--VFHVDMIMLA---------HNPGGRERYEREFQALARGAG-FTGVKST 351 (364)
T ss_dssp HHHHSCTTCEEEEEECCBCSSCCSSHHHHH--HHHHHHHHHH---------HCSSCCCCBHHHHHHHHHHTT-CCEEEEE
T ss_pred HHHHcCCCCEEEEEEeccCCCCCcchhhhh--HHHhHHHHHh---------cccCCccCCHHHHHHHHHHCC-CceEEEE
Confidence 8999999999998754332 111111111 0111211100 011223468999999999999 9988776
Q ss_pred EE
Q 044727 300 TS 301 (380)
Q Consensus 300 ~~ 301 (380)
..
T Consensus 352 ~~ 353 (364)
T 3p9c_A 352 YI 353 (364)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 50
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.74 E-value=3.8e-08 Score=93.01 Aligned_cols=90 Identities=22% Similarity=0.310 Sum_probs=64.6
Q ss_pred CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEE
Q 044727 154 FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMV 233 (380)
Q Consensus 154 ~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~ 233 (380)
+|++++|+|+|+.+|||+..- + .|+..+|+.-++.|||||+|+
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~---~----------------------------------~~~~~~l~~~~r~LkpGG~l~ 212 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPD---L----------------------------------ASFQRALDHITTLLRPGGHLL 212 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSS---H----------------------------------HHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCC---H----------------------------------HHHHHHHHHHHHhcCCCCEEE
Confidence 567889999999999996532 1 134455888899999999999
Q ss_pred EEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEEeec
Q 044727 234 LNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETSHIS 304 (380)
Q Consensus 234 ~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~~~ 304 (380)
+......... ....-..+.++.+.+|+...+++.| |++..++.+..+
T Consensus 213 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 213 LIGALEESWY-----------------------LAGEARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp EEEEESCCEE-----------------------EETTEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred EEEecCcceE-----------------------EcCCeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 9743221100 0001133567889999999999999 999998877643
No 51
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.74 E-value=1.5e-07 Score=91.33 Aligned_cols=154 Identities=13% Similarity=0.131 Sum_probs=94.0
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..+..+... + |..+++.-|+|. .-...+ .... ..+ ... -+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~--~~~~a~------~~~~-~~~---~~~-~v 231 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRR--------H-------PQLTGQIWDLPT--TRDAAR------KTIH-AHD---LGG-RV 231 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHH--------C-------TTCEEEEEECGG--GHHHHH------HHHH-HTT---CGG-GE
T ss_pred CCEEEEeCCCcCHHHHHHHHh--------C-------CCCeEEEEECHH--HHHHHH------HHHH-hcC---CCC-ce
Confidence 689999999999988877432 2 568888889953 111111 0011 111 011 12
Q ss_pred eccCCCcccCC-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRL-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 143 ~~vpgSFy~~l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
.-+.|+|+... ++++++|++++...||++++ . +...+|+.
T Consensus 232 ~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~---~------------------------------------~~~~~l~~ 272 (352)
T 3mcz_A 232 EFFEKNLLDARNFEGGAADVVMLNDCLHYFDA---R------------------------------------EAREVIGH 272 (352)
T ss_dssp EEEECCTTCGGGGTTCCEEEEEEESCGGGSCH---H------------------------------------HHHHHHHH
T ss_pred EEEeCCcccCcccCCCCccEEEEecccccCCH---H------------------------------------HHHHHHHH
Confidence 22668887654 25677999999999997422 1 23445888
Q ss_pred HHHHhccCceEEEEeccCCCc-chhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeE
Q 044727 222 RSEELKTEGRMVLNFIGNDKY-HTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQ 297 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~-~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~ 297 (380)
-++.|+|||++++.-...+.. ....+..+.+..+ ++.. .-...++.+|++.++++.| |++.+
T Consensus 273 ~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~-~~~~------------~~~~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 273 AAGLVKPGGALLILTMTMNDDRVTPALSADFSLHM-MVNT------------NHGELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp HHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHH-HHHS------------TTCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred HHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHH-HhhC------------CCCCcCCHHHHHHHHHHCC-Cceee
Confidence 899999999999876544311 1122222211111 1110 0122468999999999999 99877
No 52
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.74 E-value=3.6e-07 Score=90.02 Aligned_cols=151 Identities=17% Similarity=0.163 Sum_probs=94.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... |..+++..|+|. ...... ...+-.|
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~---------------p~~~~~~~D~~~-----~~~~a~------------~~~~v~~ 250 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKY---------------PSINAINFDLPH-----VIQDAP------------AFSGVEH 250 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC---------------TTCEEEEEECHH-----HHTTCC------------CCTTEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC---------------CCCEEEEEehHH-----HHHhhh------------hcCCCEE
Confidence 45899999999999888874332 678899999852 111110 0002234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.|+|++ .+|+. |++++++.||++++ . +...+|+.
T Consensus 251 ---~~~d~~~-~~p~~--D~v~~~~vlh~~~~---~------------------------------------~~~~~l~~ 285 (368)
T 3reo_A 251 ---LGGDMFD-GVPKG--DAIFIKWICHDWSD---E------------------------------------HCLKLLKN 285 (368)
T ss_dssp ---EECCTTT-CCCCC--SEEEEESCGGGBCH---H------------------------------------HHHHHHHH
T ss_pred ---EecCCCC-CCCCC--CEEEEechhhcCCH---H------------------------------------HHHHHHHH
Confidence 6699987 77865 99999999986432 1 23345888
Q ss_pred HHHHhccCceEEEEeccCC--CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEE
Q 044727 222 RSEELKTEGRMVLNFIGND--KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLE 299 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~--~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e 299 (380)
-++.|+|||++++.-.-.+ +...... .. ..+.++..-.. ...-..++.+|+++++++.| |++.++.
T Consensus 286 ~~~~L~pgG~l~i~e~~~~~~~~~~~~~-~~-~~~~d~~~~~~---------~~~g~~rt~~e~~~ll~~AG-F~~v~~~ 353 (368)
T 3reo_A 286 CYAALPDHGKVIVAEYILPPSPDPSIAT-KV-VIHTDALMLAY---------NPGGKERTEKEFQALAMASG-FRGFKVA 353 (368)
T ss_dssp HHHHSCTTCEEEEEECCCCSSCCCCHHH-HH-HHHHHHHHHHH---------SSBCCCCCHHHHHHHHHHTT-CCEEEEE
T ss_pred HHHHcCCCCEEEEEEeccCCCCCCchhh-hH-HHhhhHHHHhh---------cCCCccCCHHHHHHHHHHCC-CeeeEEE
Confidence 8999999999998755432 1110000 00 01122111000 11223468999999999999 9987766
Q ss_pred EE
Q 044727 300 TS 301 (380)
Q Consensus 300 ~~ 301 (380)
..
T Consensus 354 ~~ 355 (368)
T 3reo_A 354 SC 355 (368)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 53
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.73 E-value=2e-07 Score=91.46 Aligned_cols=152 Identities=16% Similarity=0.106 Sum_probs=93.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
..-+|+|+|||+|..++.+++ ++ |.++++.-|+|. -....+.........+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~--------~~-------p~~~~~~~dlp~------------v~~~a~~~~~~~~~~r-- 229 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMS--------LY-------PGCKITVFDIPE------------VVWTAKQHFSFQEEEQ-- 229 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHH--------HC-------SSCEEEEEECHH------------HHHHHHHHSCC--CCS--
T ss_pred cCCeEEeeCCCCCHHHHHHHH--------hC-------CCceeEeccCHH------------HHHHHHHhhhhcccCc--
Confidence 346899999999998777733 33 778999999974 1111111100000112
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.-++|+|+...+|. .|+++.++.||-. |.. +-..+|+.
T Consensus 230 v~~~~gD~~~~~~~~--~D~~~~~~vlh~~---~d~------------------------------------~~~~iL~~ 268 (353)
T 4a6d_A 230 IDFQEGDFFKDPLPE--ADLYILARVLHDW---ADG------------------------------------KCSHLLER 268 (353)
T ss_dssp EEEEESCTTTSCCCC--CSEEEEESSGGGS---CHH------------------------------------HHHHHHHH
T ss_pred eeeecCccccCCCCC--ceEEEeeeecccC---CHH------------------------------------HHHHHHHH
Confidence 233789999876664 5999999999942 221 22345888
Q ss_pred HHHHhccCceEEEEeccCC--CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEE
Q 044727 222 RSEELKTEGRMVLNFIGND--KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLE 299 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~--~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e 299 (380)
-++.|+|||++++.=.-.+ ... +....+.+. .=|+. ..--.||.+|+++++++.| |++.++.
T Consensus 269 ~~~al~pgg~lli~e~~~~~~~~~-~~~~~~~dl-~ml~~-------------~~g~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 269 IYHTCKPGGGILVIESLLDEDRRG-PLLTQLYSL-NMLVQ-------------TEGQERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp HHHHCCTTCEEEEEECCCCTTSCC-CHHHHHHHH-HHHHS-------------SSCCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred HHhhCCCCCEEEEEEeeeCCCCCC-CHHHHHHHH-HHHHh-------------CCCcCCCHHHHHHHHHHCC-CceEEEE
Confidence 8999999999988644322 111 122121111 11111 1122479999999999999 9987764
No 54
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.72 E-value=1.3e-07 Score=84.74 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=94.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ..+++..|+.. ......+... +..+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~-----~~~~ 89 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA-----------------GFDVDATDGSP-----------ELAAEASRRL-----GRPV 89 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHHHH-----TSCC
T ss_pred CCCcEEEECCCCCHHHHHHHHc-----------------CCeEEEECCCH-----------HHHHHHHHhc-----CCce
Confidence 3579999999999988777321 25788888732 1111111111 1122
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++.... +++++|+++++.++|++. . .|+..+|+.
T Consensus 90 ---~~~d~~~~~-~~~~fD~v~~~~~l~~~~---~------------------------------------~~~~~~l~~ 126 (211)
T 3e23_A 90 ---RTMLFHQLD-AIDAYDAVWAHACLLHVP---R------------------------------------DELADVLKL 126 (211)
T ss_dssp ---EECCGGGCC-CCSCEEEEEECSCGGGSC---H------------------------------------HHHHHHHHH
T ss_pred ---EEeeeccCC-CCCcEEEEEecCchhhcC---H------------------------------------HHHHHHHHH
Confidence 236665444 899999999999999953 1 134456888
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
-.+.|+|||++++.+....... .+.+...+.+.+.+++..++++.|-|++..++..
T Consensus 127 ~~~~LkpgG~l~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 127 IWRALKPGGLFYASYKSGEGEG------------------------RDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHHEEEEEEEEEEEECCSSCE------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred HHHhcCCCcEEEEEEcCCCccc------------------------ccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 8999999999999976443211 1122334567899999999999987888887765
Q ss_pred e
Q 044727 302 H 302 (380)
Q Consensus 302 ~ 302 (380)
.
T Consensus 183 ~ 183 (211)
T 3e23_A 183 E 183 (211)
T ss_dssp E
T ss_pred c
Confidence 4
No 55
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.72 E-value=6.4e-08 Score=86.79 Aligned_cols=148 Identities=15% Similarity=0.142 Sum_probs=90.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
.+.+|+|+|||+|.++..+... ..+++..|+.. ......+.. + ...+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~-~----~~~~ 98 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR-----------------GIEAVGVDGDR-----------TLVDAARAA-G----AGEV 98 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT-----------------TCEEEEEESCH-----------HHHHHHHHT-C----SSCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC-----------------CCEEEEEcCCH-----------HHHHHHHHh-c----cccc
Confidence 3589999999999888766211 25788888742 111111111 1 1223
Q ss_pred eeccCCCcccC---C-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGR---L-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 142 ~~~vpgSFy~~---l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
.. +++..- . .+..++|+++++.++| ..+ +. .
T Consensus 99 ~~---~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~--------------------------~~---------------~ 133 (227)
T 3e8s_A 99 HL---ASYAQLAEAKVPVGKDYDLICANFALL-HQD--------------------------II---------------E 133 (227)
T ss_dssp EE---CCHHHHHTTCSCCCCCEEEEEEESCCC-SSC--------------------------CH---------------H
T ss_pred ch---hhHHhhcccccccCCCccEEEECchhh-hhh--------------------------HH---------------H
Confidence 22 333222 3 3455599999999999 221 11 2
Q ss_pred HHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccc-----cccCcccCCHHHHHHHHHhcCc
Q 044727 218 FLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLES-----FHFPMYNPCVEEVRQVIEREGS 292 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~-----f~~P~Y~ps~eE~~~~ie~~Gs 292 (380)
+|+.-.+.|+|||++++..+.+...... .+ .++. ..+.+.. ...+.++++.+|+..++++.|
T Consensus 134 ~l~~~~~~L~pgG~l~~~~~~~~~~~~~---~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG- 200 (227)
T 3e8s_A 134 LLSAMRTLLVPGGALVIQTLHPWSVADG---DY--------QDGW-REESFAGFAGDWQPMPWYFRTLASWLNALDMAG- 200 (227)
T ss_dssp HHHHHHHTEEEEEEEEEEECCTTTTCTT---CC--------SCEE-EEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT-
T ss_pred HHHHHHHHhCCCeEEEEEecCccccCcc---cc--------cccc-chhhhhccccCcccceEEEecHHHHHHHHHHcC-
Confidence 3677789999999999999876521100 00 0111 1111111 246678899999999999999
Q ss_pred eeEeEEEE
Q 044727 293 FNIHQLET 300 (380)
Q Consensus 293 F~I~~~e~ 300 (380)
|++.+++.
T Consensus 201 f~~~~~~~ 208 (227)
T 3e8s_A 201 LRLVSLQE 208 (227)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEec
Confidence 99988775
No 56
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.71 E-value=1.6e-07 Score=92.19 Aligned_cols=158 Identities=17% Similarity=0.176 Sum_probs=95.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
.+.+|+|+|||+|..+..+++. + |..+++..|+|. .. ...+......... --
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~-----------~~-~~a~~~~~~~~~~-~~ 230 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQY--------N-------KEVEVTIVDLPQ-----------QL-EMMRKQTAGLSGS-ER 230 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHH--------S-------TTCEEEEEECHH-----------HH-HHHHHHHTTCTTG-GG
T ss_pred CCCEEEEeCCCcCHHHHHHHHh--------C-------CCCEEEEEeCHH-----------HH-HHHHHHHHhcCcc-cc
Confidence 4579999999999988877433 2 668999999853 11 1111110000000 11
Q ss_pred eeccCCCcccC--CCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGR--LFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 142 ~~~vpgSFy~~--l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
+.-+.|+|+.. .+| +++|++++.+.||.+++ . +...+|
T Consensus 231 v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~---~------------------------------------~~~~~l 270 (363)
T 3dp7_A 231 IHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSE---E------------------------------------EVISIL 270 (363)
T ss_dssp EEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCH---H------------------------------------HHHHHH
T ss_pred eEEEEccccccCCCCC-CCcCEEEEechhhhCCH---H------------------------------------HHHHHH
Confidence 22367999875 467 89999999999985321 1 234458
Q ss_pred HHHHHHhccCceEEEEeccCC--CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeE
Q 044727 220 KFRSEELKTEGRMVLNFIGND--KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQ 297 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g~~--~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~ 297 (380)
+.-++.|+|||++++.-.-.+ ......+... ....++..- .......++.+|+++++++.| |++.+
T Consensus 271 ~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~t~~e~~~ll~~AG-f~~v~ 338 (363)
T 3dp7_A 271 TRVAQSIGKDSKVYIMETLWDRQRYETASYCLT-QISLYFTAM----------ANGNSKMFHSDDLIRCIENAG-LEVEE 338 (363)
T ss_dssp HHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHH-HHHHHHHHS----------SCSSCCSCCHHHHHHHHHTTT-EEESC
T ss_pred HHHHHhcCCCcEEEEEeeccCCccccchhhHHH-HhhhhHHhh----------hCCCCcccCHHHHHHHHHHcC-CeEEE
Confidence 888999999999988654333 1111111111 011111000 012234569999999999999 98876
Q ss_pred EE
Q 044727 298 LE 299 (380)
Q Consensus 298 ~e 299 (380)
+.
T Consensus 339 ~~ 340 (363)
T 3dp7_A 339 IQ 340 (363)
T ss_dssp CC
T ss_pred EE
Confidence 64
No 57
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.71 E-value=2.2e-07 Score=87.13 Aligned_cols=143 Identities=9% Similarity=0.003 Sum_probs=92.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCC-------
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGH------- 134 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~------- 134 (380)
...+|+|+|||+|.++..+.+ . ..+|+..|+.. .+. ...+...+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~--------~---------G~~V~gvD~S~----------~~i-~~a~~~~~~~~~~~~~ 119 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFAD--------R---------GHTVVGVEISE----------IGI-REFFAEQNLSYTEEPL 119 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHH--------T---------TCEEEEECSCH----------HHH-HHHHHHTTCCEEEEEC
T ss_pred CCCeEEEeCCCCcHHHHHHHH--------C---------CCeEEEEECCH----------HHH-HHHHHhcccccccccc
Confidence 357999999999999987722 1 26888889853 111 111111100
Q ss_pred -----------CCCCcceeeccCCCcccCCCCC-CccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHH
Q 044727 135 -----------DDFGSCFIAAAPGSFHGRLFPP-CFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFS 202 (380)
Q Consensus 135 -----------~~~~~~f~~~vpgSFy~~l~p~-~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~ 202 (380)
...+-.| +-|++.+..++. +++|+|++..+||++. ..
T Consensus 120 ~~~~~~~~~~~~~~~i~~---~~~D~~~l~~~~~~~FD~V~~~~~l~~l~---~~------------------------- 168 (252)
T 2gb4_A 120 AEIAGAKVFKSSSGSISL---YCCSIFDLPRANIGKFDRIWDRGALVAIN---PG------------------------- 168 (252)
T ss_dssp TTSTTCEEEEETTSSEEE---EESCTTTGGGGCCCCEEEEEESSSTTTSC---GG-------------------------
T ss_pred cccccccccccCCCceEE---EECccccCCcccCCCEEEEEEhhhhhhCC---HH-------------------------
Confidence 0011234 347887766654 8999999999999963 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHH
Q 044727 203 VHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEE 282 (380)
Q Consensus 203 ~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE 282 (380)
+...+++.-++.|+|||++++.++.... + ...-|.+..+++|
T Consensus 169 -----------~~~~~l~~~~~~LkpGG~l~l~~~~~~~-------------------~--------~~~g~~~~~~~~e 210 (252)
T 2gb4_A 169 -----------DHDRYADIILSLLRKEFQYLVAVLSYDP-------------------T--------KHAGPPFYVPSAE 210 (252)
T ss_dssp -----------GHHHHHHHHHHTEEEEEEEEEEEEECCT-------------------T--------SCCCSSCCCCHHH
T ss_pred -----------HHHHHHHHHHHHcCCCeEEEEEEEecCC-------------------c--------cCCCCCCCCCHHH
Confidence 1223467778999999999866543210 0 0112445578999
Q ss_pred HHHHHHhcCceeEeEEEEEee
Q 044727 283 VRQVIEREGSFNIHQLETSHI 303 (380)
Q Consensus 283 ~~~~ie~~GsF~I~~~e~~~~ 303 (380)
+...++. + |+|..++.++.
T Consensus 211 l~~~l~~-~-f~v~~~~~~~~ 229 (252)
T 2gb4_A 211 LKRLFGT-K-CSMQCLEEVDA 229 (252)
T ss_dssp HHHHHTT-T-EEEEEEEEEEC
T ss_pred HHHHhhC-C-eEEEEEecccc
Confidence 9999986 5 99999987653
No 58
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.68 E-value=7.3e-07 Score=85.90 Aligned_cols=152 Identities=16% Similarity=0.110 Sum_probs=91.2
Q ss_pred eEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcceee
Q 044727 64 IRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIA 143 (380)
Q Consensus 64 ~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 143 (380)
.+|+|+|||+|..+..+... + |..+++..|+|. . +......... .+.. ..-.|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~--~------~~~a~~~~~~-~~~~-~~v~~-- 221 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQA--------E-------PSARGVMLDREG--S------LGVARDNLSS-LLAG-ERVSL-- 221 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHH--------C-------TTCEEEEEECTT--C------THHHHHHTHH-HHHT-TSEEE--
T ss_pred CEEEEeCCCchHHHHHHHHH--------C-------CCCEEEEeCcHH--H------HHHHHHHHhh-cCCC-CcEEE--
Confidence 89999999999887776322 2 567899999943 1 1111110100 0000 01233
Q ss_pred ccCCCcccCCCCCCccceEEcccccc-cccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 144 AAPGSFHGRLFPPCFLNLVYSSFCLH-WLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 144 ~vpgSFy~~l~p~~svdl~~Ss~alh-Wls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
+.|+|.+ .+| +++|++++...+| | |.. +...+|+.-
T Consensus 222 -~~~d~~~-~~~-~~~D~v~~~~vl~~~----~~~------------------------------------~~~~~l~~~ 258 (334)
T 2ip2_A 222 -VGGDMLQ-EVP-SNGDIYLLSRIIGDL----DEA------------------------------------ASLRLLGNC 258 (334)
T ss_dssp -EESCTTT-CCC-SSCSEEEEESCGGGC----CHH------------------------------------HHHHHHHHH
T ss_pred -ecCCCCC-CCC-CCCCEEEEchhccCC----CHH------------------------------------HHHHHHHHH
Confidence 5688877 466 7899999999998 5 211 123457778
Q ss_pred HHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 223 SEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 223 a~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
++.|+|||++++.-...++.....+..+.+..+ +... .-..++.+|+++++++.| |++.++..
T Consensus 259 ~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~~~~ 321 (334)
T 2ip2_A 259 REAMAGDGRVVVIERTISASEPSPMSVLWDVHL-FMAC-------------AGRHRTTEEVVDLLGRGG-FAVERIVD 321 (334)
T ss_dssp HHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHH-HHHH-------------SCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHhcCCCCEEEEEEeccCCCCCcchhHHhhhHh-HhhC-------------CCcCCCHHHHHHHHHHCC-CceeEEEE
Confidence 899999999999865433111011111111111 1111 122358999999999999 99877654
No 59
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.67 E-value=3.9e-07 Score=82.41 Aligned_cols=98 Identities=12% Similarity=0.165 Sum_probs=66.9
Q ss_pred CCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044727 147 GSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEEL 226 (380)
Q Consensus 147 gSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL 226 (380)
+++....++++++|++++..++||+.+. ..+|+.-.+.|
T Consensus 91 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~~~~~~L 129 (219)
T 1vlm_A 91 GTAENLPLKDESFDFALMVTTICFVDDP-----------------------------------------ERALKEAYRIL 129 (219)
T ss_dssp CBTTBCCSCTTCEEEEEEESCGGGSSCH-----------------------------------------HHHHHHHHHHE
T ss_pred cccccCCCCCCCeeEEEEcchHhhccCH-----------------------------------------HHHHHHHHHHc
Confidence 5665556788999999999999996321 12366668899
Q ss_pred ccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEE
Q 044727 227 KTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETS 301 (380)
Q Consensus 227 ~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~ 301 (380)
+|||++++..+.+... +..+ +... ..+ ..+.....+.+.+|+..++++.| |++..+...
T Consensus 130 ~pgG~l~i~~~~~~~~----~~~~---~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 130 KKGGYLIVGIVDRESF----LGRE---YEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp EEEEEEEEEEECSSSH----HHHH---HHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred CCCcEEEEEEeCCccH----HHHH---HHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 9999999998765311 1111 1111 111 12333456689999999999999 998887654
No 60
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.65 E-value=4.7e-08 Score=89.72 Aligned_cols=146 Identities=15% Similarity=0.149 Sum_probs=93.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCC-CCCcc
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHD-DFGSC 140 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~-~~~~~ 140 (380)
...+|+|+|||+|..+..+... -..+++..|+.. ......+...... ...-.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~----------------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~ 131 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLP----------------LFREVDMVDITE-----------DFLVQAKTYLGEEGKRVRN 131 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTT----------------TCSEEEEEESCH-----------HHHHHHHHHTGGGGGGEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHh----------------cCCEEEEEeCCH-----------HHHHHHHHHhhhcCCceEE
Confidence 3689999999999988876221 124788888742 1111111100000 00112
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +.+++....++++++|++++..++|++.+ . ++..+|+
T Consensus 132 ~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---~------------------------------------~~~~~l~ 169 (241)
T 2ex4_A 132 Y---FCCGLQDFTPEPDSYDVIWIQWVIGHLTD---Q------------------------------------HLAEFLR 169 (241)
T ss_dssp E---EECCGGGCCCCSSCEEEEEEESCGGGSCH---H------------------------------------HHHHHHH
T ss_pred E---EEcChhhcCCCCCCEEEEEEcchhhhCCH---H------------------------------------HHHHHHH
Confidence 3 34677676778889999999999998533 1 2334577
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.-.+.|+|||++++....... . . . ++. ..+.+.++.+|+..++++.| |++...+.
T Consensus 170 ~~~~~LkpgG~l~i~~~~~~~-~-~----------------~-----~~~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 224 (241)
T 2ex4_A 170 RCKGSLRPNGIIVIKDNMAQE-G-V----------------I-----LDD-VDSSVCRDLDVVRRIICSAG-LSLLAEER 224 (241)
T ss_dssp HHHHHEEEEEEEEEEEEEBSS-S-E----------------E-----EET-TTTEEEEBHHHHHHHHHHTT-CCEEEEEE
T ss_pred HHHHhcCCCeEEEEEEccCCC-c-c----------------e-----ecc-cCCcccCCHHHHHHHHHHcC-CeEEEeee
Confidence 778999999999998765432 0 0 0 000 12344569999999999999 99988775
Q ss_pred E
Q 044727 301 S 301 (380)
Q Consensus 301 ~ 301 (380)
.
T Consensus 225 ~ 225 (241)
T 2ex4_A 225 Q 225 (241)
T ss_dssp C
T ss_pred c
Confidence 4
No 61
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.61 E-value=4.6e-08 Score=97.40 Aligned_cols=147 Identities=12% Similarity=0.108 Sum_probs=91.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+. +. ..+|+..|+.. ......+. .+.......|
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~--------~~---------g~~v~gvD~s~-----------~~~~~a~~-~~~~~~~~~~ 157 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQ--------EA---------GVRHLGFEPSS-----------GVAAKARE-KGIRVRTDFF 157 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------HT---------TCEEEEECCCH-----------HHHHHHHT-TTCCEECSCC
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hc---------CCcEEEECCCH-----------HHHHHHHH-cCCCcceeee
Confidence 35799999999999877662 21 25888889743 11111111 1100001112
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
. .++.....++++++|+++|..+|||+.+ ...||+.
T Consensus 158 ~---~~~~~~l~~~~~~fD~I~~~~vl~h~~d-----------------------------------------~~~~l~~ 193 (416)
T 4e2x_A 158 E---KATADDVRRTEGPANVIYAANTLCHIPY-----------------------------------------VQSVLEG 193 (416)
T ss_dssp S---HHHHHHHHHHHCCEEEEEEESCGGGCTT-----------------------------------------HHHHHHH
T ss_pred c---hhhHhhcccCCCCEEEEEECChHHhcCC-----------------------------------------HHHHHHH
Confidence 1 1222222357899999999999999742 1234777
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCccccccccc-ccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESF-HFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f-~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-++.|+|||++++.+.... .. +. .. .++.+ .-.+++++.++++.++++.| |++..++.
T Consensus 194 ~~r~LkpgG~l~i~~~~~~-------~~----~~----~~-----~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~ 252 (416)
T 4e2x_A 194 VDALLAPDGVFVFEDPYLG-------DI----VA----KT-----SFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQR 252 (416)
T ss_dssp HHHHEEEEEEEEEEEECHH-------HH----HH----HT-----CGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHHcCCCeEEEEEeCChH-------Hh----hh----hc-----chhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEE
Confidence 7999999999999875321 11 11 11 11111 23455689999999999999 99988887
Q ss_pred Ee
Q 044727 301 SH 302 (380)
Q Consensus 301 ~~ 302 (380)
+.
T Consensus 253 ~~ 254 (416)
T 4e2x_A 253 LP 254 (416)
T ss_dssp EC
T ss_pred cc
Confidence 63
No 62
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.61 E-value=2.8e-07 Score=91.20 Aligned_cols=117 Identities=16% Similarity=0.198 Sum_probs=72.5
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhc-C-CCCCCc
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTER-G-HDDFGS 139 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~-~-~~~~~~ 139 (380)
...+|+|+|||+|..++.+.... .|..+|+..|+.. +.-...+..- ....... | ....+-
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~--------------~~~~~v~gvD~s~-~~l~~a~~~~---~~~~~~~~g~~~~~~v 144 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV--------------GEHGKVIGVDMLD-NQLEVARKYV---EYHAEKFFGSPSRSNV 144 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------------TTTCEEEEEECCH-HHHHHHHHTH---HHHHHHHHSSTTCCCE
T ss_pred CCCEEEEecCccCHHHHHHHHHh--------------CCCCEEEEEECCH-HHHHHHHHHH---HHhhhhcccccCCCce
Confidence 35799999999999988774332 1457899999842 1111111000 0000000 1 000122
Q ss_pred ceeeccCCCcccC------CCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGR------LFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEI 213 (380)
Q Consensus 140 ~f~~~vpgSFy~~------l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~ 213 (380)
.| +.+++... .+|++++|+|+|..++||+.+.
T Consensus 145 ~~---~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~--------------------------------------- 182 (383)
T 4fsd_A 145 RF---LKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNK--------------------------------------- 182 (383)
T ss_dssp EE---EESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCH---------------------------------------
T ss_pred EE---EEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCH---------------------------------------
Confidence 34 34677554 7899999999999999996431
Q ss_pred HHHHHHHHHHHHhccCceEEEEeccCC
Q 044727 214 DFTSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 214 D~~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
..+|+.-.+.|||||+|+++.+...
T Consensus 183 --~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 183 --LALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp --HHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred --HHHHHHHHHHcCCCCEEEEEEeccc
Confidence 1236667899999999999877654
No 63
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.61 E-value=1.1e-07 Score=86.48 Aligned_cols=108 Identities=12% Similarity=0.172 Sum_probs=69.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ..+++..|+.. ......+.........-.|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-----------------~~~~~~~D~s~-----------~~~~~a~~~~~~~~~~~~~ 88 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-----------------FKNTWAVDLSQ-----------EMLSEAENKFRSQGLKPRL 88 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-----------------SSEEEEECSCH-----------HHHHHHHHHHHHTTCCCEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-----------------CCcEEEEECCH-----------HHHHHHHHHHhhcCCCeEE
Confidence 4579999999999998877211 25788888742 1111111100000001223
Q ss_pred eeccCCCcccCCCCCCccceEEccc-ccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSF-CLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~-alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
+.+++....++ +++|+++++. ++||+... .|...+|+
T Consensus 89 ---~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~--------------------------------------~~~~~~l~ 126 (246)
T 1y8c_A 89 ---ACQDISNLNIN-RKFDLITCCLDSTNYIIDS--------------------------------------DDLKKYFK 126 (246)
T ss_dssp ---ECCCGGGCCCS-CCEEEEEECTTGGGGCCSH--------------------------------------HHHHHHHH
T ss_pred ---EecccccCCcc-CCceEEEEcCccccccCCH--------------------------------------HHHHHHHH
Confidence 45777665566 8999999998 99996321 13455688
Q ss_pred HHHHHhccCceEEEEeccC
Q 044727 221 FRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~ 239 (380)
.-++.|+|||++++.+..+
T Consensus 127 ~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 127 AVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp HHHTTEEEEEEEEEEEECH
T ss_pred HHHHhcCCCcEEEEEecCH
Confidence 8899999999999988754
No 64
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.60 E-value=4.1e-07 Score=87.37 Aligned_cols=157 Identities=16% Similarity=0.095 Sum_probs=94.5
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... + |..+++..|++ +.-...+. ... ..+.. ..-.|
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~--~~~~~a~~------~~~-~~~~~-~~v~~ 219 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQH--------N-------PNAEIFGVDWA--SVLEVAKE------NAR-IQGVA-SRYHT 219 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHH--------C-------TTCEEEEEECH--HHHHHHHH------HHH-HHTCG-GGEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHH--------C-------CCCeEEEEecH--HHHHHHHH------HHH-hcCCC-cceEE
Confidence 4589999999999877766322 1 55799999985 22211111 010 01100 01133
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|.+ +|++++.+.+|.+++ .+...+|+.
T Consensus 220 ---~~~d~~~~~~~~~-~D~v~~~~~l~~~~~---------------------------------------~~~~~~l~~ 256 (335)
T 2r3s_A 220 ---IAGSAFEVDYGND-YDLVLLPNFLHHFDV---------------------------------------ATCEQLLRK 256 (335)
T ss_dssp ---EESCTTTSCCCSC-EEEEEEESCGGGSCH---------------------------------------HHHHHHHHH
T ss_pred ---EecccccCCCCCC-CcEEEEcchhccCCH---------------------------------------HHHHHHHHH
Confidence 5588876556655 999999999987421 133445777
Q ss_pred HHHHhccCceEEEEeccCCCc-chhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKY-HTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~-~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-.+.|+|||++++.-...... ....+..+.+..+ +... .....++.+|+++++++.| |++.++..
T Consensus 257 ~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~-~~~~------------~~~~~~t~~~~~~ll~~aG-f~~~~~~~ 322 (335)
T 2r3s_A 257 IKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVM-LATT------------PNGDAYTFAEYESMFSNAG-FSHSQLHS 322 (335)
T ss_dssp HHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHH-HHHS------------SSCCCCCHHHHHHHHHHTT-CSEEEEEC
T ss_pred HHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHH-HeeC------------CCCCcCCHHHHHHHHHHCC-CCeeeEEE
Confidence 789999999998877654421 1112222211111 1111 1224569999999999999 98877643
No 65
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.60 E-value=1.2e-07 Score=86.21 Aligned_cols=165 Identities=16% Similarity=0.199 Sum_probs=93.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.. . + . .+++..|+.. ......+.... . .+-.|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~--------~----~---~-~~v~~vD~s~-----------~~~~~a~~~~~-~-~~~~~ 93 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHE--------H----G---A-SYVLGLDLSE-----------KMLARARAAGP-D-TGITY 93 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T----T---C-SEEEEEESCH-----------HHHHHHHHTSC-S-SSEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHH--------C----C---C-CeEEEEcCCH-----------HHHHHHHHhcc-c-CCceE
Confidence 357999999999998776621 1 0 1 2788888732 11111111110 1 01123
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|+++++.++||+.+. ..+|+.
T Consensus 94 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~~ 129 (243)
T 3bkw_A 94 ---ERADLDKLHLPQDSFDLAYSSLALHYVEDV-----------------------------------------ARLFRT 129 (243)
T ss_dssp ---EECCGGGCCCCTTCEEEEEEESCGGGCSCH-----------------------------------------HHHHHH
T ss_pred ---EEcChhhccCCCCCceEEEEeccccccchH-----------------------------------------HHHHHH
Confidence 447777767889999999999999996321 123666
Q ss_pred HHHHhccCceEEEEeccCC---CcchhHHHHHHHHHHHHHHccCccccc-cccc---ccCcccCCHHHHHHHHHhcCcee
Q 044727 222 RSEELKTEGRMVLNFIGND---KYHTGVFELMGMVLNDMVYEGLIEVSK-LESF---HFPMYNPCVEEVRQVIEREGSFN 294 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~---~~~~~~~~~l~~al~~mv~eG~i~~e~-~d~f---~~P~Y~ps~eE~~~~ie~~GsF~ 294 (380)
-++.|+|||++++....+. ... ..|..-...-......++..... ...+ ....|+++.+|+..++++.| |+
T Consensus 130 ~~~~L~pgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aG-F~ 207 (243)
T 3bkw_A 130 VHQALSPGGHFVFSTEHPIYMAPAR-PGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSG-FA 207 (243)
T ss_dssp HHHHEEEEEEEEEEEECHHHHCCSS-CSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTT-CE
T ss_pred HHHhcCcCcEEEEEeCCcccccCcC-cceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcC-CE
Confidence 6899999999999886432 000 00000000000000000000000 0001 34567789999999999999 99
Q ss_pred EeEEEEE
Q 044727 295 IHQLETS 301 (380)
Q Consensus 295 I~~~e~~ 301 (380)
+..++..
T Consensus 208 ~~~~~~~ 214 (243)
T 3bkw_A 208 IEHVEEF 214 (243)
T ss_dssp EEEEEEC
T ss_pred eeeeccC
Confidence 9887643
No 66
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.59 E-value=3.6e-07 Score=84.71 Aligned_cols=104 Identities=12% Similarity=0.121 Sum_probs=68.4
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
++..+|+|+|||+|..+..+... ..+|+..|+.. ......+... . .-.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~gvD~s~-----------~~~~~a~~~~--~--~~~ 96 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-----------------FGTVEGLELSA-----------DMLAIARRRN--P--DAV 96 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-----------------SSEEEEEESCH-----------HHHHHHHHHC--T--TSE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-----------------CCeEEEEECCH-----------HHHHHHHhhC--C--CCE
Confidence 34589999999999988776211 14688888732 1111111111 1 123
Q ss_pred eeeccCCCcccCCCCCCccceEEccc-ccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSF-CLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~-alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
| +.+++....+ ++++|++++.. ++||+... .|+..+|
T Consensus 97 ~---~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~--------------------------------------~~~~~~l 134 (263)
T 3pfg_A 97 L---HHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQ--------------------------------------AELDAAL 134 (263)
T ss_dssp E---EECCTTTCCC-SCCEEEEEECTTGGGGSCHH--------------------------------------HHHHHHH
T ss_pred E---EECChHHCCc-cCCcCEEEEcCchhhhcCCH--------------------------------------HHHHHHH
Confidence 4 3467755444 78999999998 99995321 2445668
Q ss_pred HHHHHHhccCceEEEEecc
Q 044727 220 KFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g 238 (380)
+.-++.|+|||++++....
T Consensus 135 ~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 135 ERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp HHHHHTEEEEEEEEECCCC
T ss_pred HHHHHhcCCCcEEEEEecc
Confidence 8889999999999998543
No 67
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.58 E-value=2.2e-07 Score=83.77 Aligned_cols=157 Identities=15% Similarity=0.126 Sum_probs=89.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCC---CC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDD---FG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~---~~ 138 (380)
.+.+|+|+|||+|..+..+... . |..+++..|+... .-...+ ..... .+... ..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~--------~-------~~~~v~gvD~s~~-~~~~a~------~~~~~-~~~~~~~~~~ 85 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKD--------K-------SFEQITGVDVSYS-VLERAK------DRLKI-DRLPEMQRKR 85 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTS--------T-------TCCEEEEEESCHH-HHHHHH------HHHTG-GGSCHHHHTT
T ss_pred CCCEEEEecCCCCHHHHHHHhc--------C-------CCCEEEEEECCHH-HHHHHH------HHHHh-hccccccCcc
Confidence 3579999999999988777221 1 4478999998431 100000 00000 00000 01
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +-+++....++++++|+++++.++||+.+ . ++..+
T Consensus 86 v~~---~~~d~~~~~~~~~~fD~V~~~~~l~~~~~---~------------------------------------~~~~~ 123 (219)
T 3jwg_A 86 ISL---FQSSLVYRDKRFSGYDAATVIEVIEHLDE---N------------------------------------RLQAF 123 (219)
T ss_dssp EEE---EECCSSSCCGGGTTCSEEEEESCGGGCCH---H------------------------------------HHHHH
T ss_pred eEE---EeCcccccccccCCCCEEEEHHHHHhCCH---H------------------------------------HHHHH
Confidence 133 33666666677899999999999999621 1 34456
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHH----HHHHhcCcee
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVR----QVIEREGSFN 294 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~----~~ie~~GsF~ 294 (380)
|+.-++.|+|||.++.......+. .|..+ ..+.. ...-..+..+.+|++ .++++.| |+
T Consensus 124 l~~~~~~LkpgG~~i~~~~~~~~~---~~~~~--------~~~~~------~~~~~~~~~~~~~l~~~~~~l~~~~G-f~ 185 (219)
T 3jwg_A 124 EKVLFEFTRPQTVIVSTPNKEYNF---HYGNL--------FEGNL------RHRDHRFEWTRKEFQTWAVKVAEKYG-YS 185 (219)
T ss_dssp HHHHHTTTCCSEEEEEEEBGGGGG---CCCCT-------------------GGGCCTTSBCHHHHHHHHHHHHHHHT-EE
T ss_pred HHHHHHhhCCCEEEEEccchhhhh---hhccc--------Ccccc------cccCceeeecHHHHHHHHHHHHHHCC-cE
Confidence 788899999999555443322111 00000 00000 112234456899999 7788889 88
Q ss_pred EeEEEEE
Q 044727 295 IHQLETS 301 (380)
Q Consensus 295 I~~~e~~ 301 (380)
++....-
T Consensus 186 v~~~~~g 192 (219)
T 3jwg_A 186 VRFLQIG 192 (219)
T ss_dssp EEEEEES
T ss_pred EEEEecC
Confidence 8666543
No 68
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.56 E-value=5.9e-07 Score=87.83 Aligned_cols=156 Identities=21% Similarity=0.224 Sum_probs=92.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... + |..+++..|+|. .-...+ .... ..+.. ..-.|
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~--------~-------~~~~~~~~D~~~--~~~~a~------~~~~-~~~~~-~~v~~ 236 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALR--------A-------PHLRGTLVELAG--PAERAR------RRFA-DAGLA-DRVTV 236 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHH--------C-------TTCEEEEEECHH--HHHHHH------HHHH-HTTCT-TTEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHH--------C-------CCCEEEEEeCHH--HHHHHH------HHHH-hcCCC-CceEE
Confidence 4589999999999877776332 2 568899999831 111110 0111 11100 01233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++.+ .+|.+ +|++++...+|++++ . +...+|+.
T Consensus 237 ---~~~d~~~-~~~~~-~D~v~~~~vl~~~~~---~------------------------------------~~~~~l~~ 272 (374)
T 1qzz_A 237 ---AEGDFFK-PLPVT-ADVVLLSFVLLNWSD---E------------------------------------DALTILRG 272 (374)
T ss_dssp ---EECCTTS-CCSCC-EEEEEEESCGGGSCH---H------------------------------------HHHHHHHH
T ss_pred ---EeCCCCC-cCCCC-CCEEEEeccccCCCH---H------------------------------------HHHHHHHH
Confidence 5588876 45654 999999999986321 1 12345777
Q ss_pred HHHHhccCceEEEEec--cCC-CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEE
Q 044727 222 RSEELKTEGRMVLNFI--GND-KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQL 298 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~--g~~-~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~ 298 (380)
-.+.|+|||++++.-. ... ... ..+..+.+... ++..| ...++.+|+++++++.| |++.++
T Consensus 273 ~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~~~ 336 (374)
T 1qzz_A 273 CVRALEPGGRLLVLDRADVEGDGAD-RFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-LALASE 336 (374)
T ss_dssp HHHHEEEEEEEEEEECCH--------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-EEEEEE
T ss_pred HHHhcCCCcEEEEEechhhcCCCCC-cchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-CceEEE
Confidence 7899999999998766 322 111 11222111111 11111 24579999999999999 998887
Q ss_pred EEEe
Q 044727 299 ETSH 302 (380)
Q Consensus 299 e~~~ 302 (380)
....
T Consensus 337 ~~~~ 340 (374)
T 1qzz_A 337 RTSG 340 (374)
T ss_dssp EEEC
T ss_pred EECC
Confidence 7654
No 69
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.56 E-value=8e-07 Score=86.78 Aligned_cols=159 Identities=14% Similarity=0.112 Sum_probs=96.2
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
.+..+|+|+|||+|..+..+... + |..+++..|+|. .-... ..... ..+.. ..-.
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~--~~~~a------~~~~~-~~~~~-~~v~ 243 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKH--------F-------PELDSTILNLPG--AIDLV------NENAA-EKGVA-DRMR 243 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHH--------C-------TTCEEEEEECGG--GHHHH------HHHHH-HTTCT-TTEE
T ss_pred CCCCEEEEECCcccHHHHHHHHH--------C-------CCCeEEEEecHH--HHHHH------HHHHH-hcCCC-CCEE
Confidence 34679999999999988877433 2 568899999842 11110 01111 11101 0123
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +.|+|....+|+. |+++++..+|.++ . .+...+|+
T Consensus 244 ~---~~~d~~~~~~~~~--D~v~~~~vlh~~~---d------------------------------------~~~~~~l~ 279 (359)
T 1x19_A 244 G---IAVDIYKESYPEA--DAVLFCRILYSAN---E------------------------------------QLSTIMCK 279 (359)
T ss_dssp E---EECCTTTSCCCCC--SEEEEESCGGGSC---H------------------------------------HHHHHHHH
T ss_pred E---EeCccccCCCCCC--CEEEEechhccCC---H------------------------------------HHHHHHHH
Confidence 3 5689987767765 9999999998532 1 12345588
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHH-ccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVY-EGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLE 299 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~-eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e 299 (380)
.-.+.|+|||++++.-..........+..+ + .|.. .| .-.....+++.+|+++++++.| |++.++.
T Consensus 280 ~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~---~-~~~~~~~--------~g~~~~~~~t~~e~~~ll~~aG-f~~v~~~ 346 (359)
T 1x19_A 280 KAFDAMRSGGRLLILDMVIDDPENPNFDYL---S-HYILGAG--------MPFSVLGFKEQARYKEILESLG-YKDVTMV 346 (359)
T ss_dssp HHHTTCCTTCEEEEEEECCCCTTSCCHHHH---H-HHGGGGG--------SSCCCCCCCCGGGHHHHHHHHT-CEEEEEE
T ss_pred HHHHhcCCCCEEEEEecccCCCCCchHHHH---H-HHHHhcC--------CCCcccCCCCHHHHHHHHHHCC-CceEEEE
Confidence 889999999999776654431111222222 1 2211 11 0011234589999999999999 9987766
Q ss_pred EE
Q 044727 300 TS 301 (380)
Q Consensus 300 ~~ 301 (380)
.+
T Consensus 347 ~~ 348 (359)
T 1x19_A 347 RK 348 (359)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 70
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.56 E-value=8.3e-07 Score=79.90 Aligned_cols=152 Identities=11% Similarity=0.024 Sum_probs=87.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCC----
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDF---- 137 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~---- 137 (380)
...+|+|+|||+|..+..+.. .. +..+++..|+.. ......+........
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~--------~~-------~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~~ 82 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLK--------DS-------FFEQITGVDVSY-----------RSLEIAQERLDRLRLPRNQ 82 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHH--------CT-------TCSEEEEEESCH-----------HHHHHHHHHHTTCCCCHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHh--------hC-------CCCEEEEEECCH-----------HHHHHHHHHHHHhcCCccc
Confidence 357999999999998887732 11 447899999843 111111111000000
Q ss_pred --CcceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHH
Q 044727 138 --GSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDF 215 (380)
Q Consensus 138 --~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~ 215 (380)
.-.| +-+++....++.+++|+++++.++||+.+ . ++
T Consensus 83 ~~~v~~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---~------------------------------------~~ 120 (217)
T 3jwh_A 83 WERLQL---IQGALTYQDKRFHGYDAATVIEVIEHLDL---S------------------------------------RL 120 (217)
T ss_dssp HTTEEE---EECCTTSCCGGGCSCSEEEEESCGGGCCH---H------------------------------------HH
T ss_pred CcceEE---EeCCcccccccCCCcCEEeeHHHHHcCCH---H------------------------------------HH
Confidence 1123 33666555567789999999999999622 1 33
Q ss_pred HHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHH----HHHHhcC
Q 044727 216 TSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVR----QVIEREG 291 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~----~~ie~~G 291 (380)
..+|+.-.+.|+|||+++++.... +... +..+.. +.. ...-..+..+.+|++ .++++.|
T Consensus 121 ~~~l~~~~~~LkpgG~li~~~~~~-------~~~~---~~~~~~-~~~------~~~~~~~~~~~~~l~~~~~~~~~~~G 183 (217)
T 3jwh_A 121 GAFERVLFEFAQPKIVIVTTPNIE-------YNVK---FANLPA-GKL------RHKDHRFEWTRSQFQNWANKITERFA 183 (217)
T ss_dssp HHHHHHHHTTTCCSEEEEEEEBHH-------HHHH---TC------------------CCSCBCHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCEEEEEccCcc-------cchh---hccccc-ccc------cccccccccCHHHHHHHHHHHHHHcC
Confidence 456778889999999666554311 1111 111101 100 112234557899999 8888889
Q ss_pred ceeEeEEE
Q 044727 292 SFNIHQLE 299 (380)
Q Consensus 292 sF~I~~~e 299 (380)
|++....
T Consensus 184 -f~v~~~~ 190 (217)
T 3jwh_A 184 -YNVQFQP 190 (217)
T ss_dssp -EEEEECC
T ss_pred -ceEEEEe
Confidence 8875543
No 71
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.56 E-value=3.6e-07 Score=87.89 Aligned_cols=171 Identities=13% Similarity=0.127 Sum_probs=95.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHH---HhhhhcCCCC--
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYE---RLKTERGHDD-- 136 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~---~~~~~~~~~~-- 136 (380)
...+|+|+|||+|..+..++. . ...+|+..|+.. .++.. .+.. .+...
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~--------~--------~~~~v~GiD~S~----------~~l~~A~~~~~~-~~~~~~~ 100 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFY--------G--------EIALLVATDPDA----------DAIARGNERYNK-LNSGIKT 100 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHH--------T--------TCSEEEEEESCH----------HHHHHHHHHHHH-HCC----
T ss_pred CCCeEEEEecCCcHhHHHHHh--------c--------CCCeEEEEECCH----------HHHHHHHHHHHh-ccccccc
Confidence 357999999999987664411 1 126788999854 22211 1111 11000
Q ss_pred --CCcceeec-cCCCccc----CCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHH
Q 044727 137 --FGSCFIAA-APGSFHG----RLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLD 209 (380)
Q Consensus 137 --~~~~f~~~-vpgSFy~----~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~ 209 (380)
+.--|..+ +-++-+. ..+|++++|+|+|..++||+-+.+.
T Consensus 101 ~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~--------------------------------- 147 (302)
T 2vdw_A 101 KYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRH--------------------------------- 147 (302)
T ss_dssp CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTT---------------------------------
T ss_pred cccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHH---------------------------------
Confidence 00013222 3333332 2468899999999999999643221
Q ss_pred HHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHH----HHHH-HHHccC-----cccccc-------cccc
Q 044727 210 QFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGM----VLND-MVYEGL-----IEVSKL-------ESFH 272 (380)
Q Consensus 210 Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~----al~~-mv~eG~-----i~~e~~-------d~f~ 272 (380)
...+|+.-++.|||||+++++++.+.... ..+.. +... ...+.. ++.+.+ ..-.
T Consensus 148 -----~~~~l~~~~r~LkpGG~~i~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (302)
T 2vdw_A 148 -----YATVMNNLSELTASGGKVLITTMDGDKLS----KLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMSTP 218 (302)
T ss_dssp -----HHHHHHHHHHHEEEEEEEEEEEECHHHHT----TCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBSSC
T ss_pred -----HHHHHHHHHHHcCCCCEEEEEeCCHHHHH----HHHhcCCcccccccccccceeeeccccccccceeeccccCCC
Confidence 12348888999999999999987543110 00000 0000 000000 000010 0224
Q ss_pred cCcccCCHHHHHHHHHhcCceeEeEEEEEe
Q 044727 273 FPMYNPCVEEVRQVIEREGSFNIHQLETSH 302 (380)
Q Consensus 273 ~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~ 302 (380)
.|-|+.+++|+..++++.| |++.....+.
T Consensus 219 ~~e~~v~~~el~~l~~~~G-l~lv~~~~f~ 247 (302)
T 2vdw_A 219 MTEYIIKKNDIVRVFNEYG-FVLVDNVDFA 247 (302)
T ss_dssp EEEECCCHHHHHHHHHHTT-EEEEEEEEHH
T ss_pred ceeeeeEHHHHHHHHHHCC-CEEEEecChH
Confidence 4667888999999999999 9887776553
No 72
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.56 E-value=3.4e-07 Score=86.84 Aligned_cols=168 Identities=11% Similarity=0.032 Sum_probs=96.6
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCC----CC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDD----FG 138 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~----~~ 138 (380)
+.+|+|+|||+|..+..+... ..+|+..|+.. ......+....... .+
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~-----------------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~~~ 134 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL-----------------GWEVTALELST-----------SVLAAFRKRLAEAPADVRDR 134 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT-----------------TCCEEEEESCH-----------HHHHHHHHHHHTSCHHHHTT
T ss_pred CCcEEEEeccCCHHHHHHHHc-----------------CCeEEEEECCH-----------HHHHHHHHHHhhcccccccc
Confidence 349999999999999877221 25788888742 11111111100000 01
Q ss_pred cceeeccCCCcccCCCCCCccceEE-cccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVY-SSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~-Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
-.| +.+++....+ ++++|+++ +..++||++. .|...
T Consensus 135 v~~---~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~---------------------------------------~~~~~ 171 (299)
T 3g2m_A 135 CTL---VQGDMSAFAL-DKRFGTVVISSGSINELDE---------------------------------------ADRRG 171 (299)
T ss_dssp EEE---EECBTTBCCC-SCCEEEEEECHHHHTTSCH---------------------------------------HHHHH
T ss_pred eEE---EeCchhcCCc-CCCcCEEEECCcccccCCH---------------------------------------HHHHH
Confidence 234 4477765444 78999887 5688888431 13445
Q ss_pred HHHHHHHHhccCceEEEEeccCCC-----cch-hHHHHHHHHHHHHHHccCccc---------------ccccccccCcc
Q 044727 218 FLKFRSEELKTEGRMVLNFIGNDK-----YHT-GVFELMGMVLNDMVYEGLIEV---------------SKLESFHFPMY 276 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~~-----~~~-~~~~~l~~al~~mv~eG~i~~---------------e~~d~f~~P~Y 276 (380)
+|+.-++.|+|||+|++.++.+.. ... ..+..... ..-......... ..+..+....+
T Consensus 172 ~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (299)
T 3g2m_A 172 LYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSG-RRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRR 250 (299)
T ss_dssp HHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC--------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCC-cEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEE
Confidence 688889999999999999987751 110 01110000 000000000000 01122344556
Q ss_pred cCCHHHHHHHHHhcCceeEeEEEEEee
Q 044727 277 NPCVEEVRQVIEREGSFNIHQLETSHI 303 (380)
Q Consensus 277 ~ps~eE~~~~ie~~GsF~I~~~e~~~~ 303 (380)
+.+++|+..++++.| |++..++.+..
T Consensus 251 ~~t~~el~~ll~~aG-F~v~~~~~~~~ 276 (299)
T 3g2m_A 251 LLAPDQVVRELVRSG-FDVIAQTPFAS 276 (299)
T ss_dssp EECHHHHHHHHHHTT-CEEEEEEEECT
T ss_pred EeCHHHHHHHHHHCC-CEEEEEEecCC
Confidence 789999999999999 99999887653
No 73
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.55 E-value=6.8e-07 Score=79.88 Aligned_cols=135 Identities=10% Similarity=0.070 Sum_probs=84.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcc-eEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPIL-HAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~-~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
...+|+|+|||+|..+..+ . . +++..|+.. ......+.... .-.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-------------------~-~~~v~~vD~s~-----------~~~~~a~~~~~----~~~ 80 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-------------------P-YPQKVGVEPSE-----------AMLAVGRRRAP----EAT 80 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-------------------C-CSEEEEECCCH-----------HHHHHHHHHCT----TSE
T ss_pred CCCeEEEECCCCCHhHHhC-------------------C-CCeEEEEeCCH-----------HHHHHHHHhCC----CcE
Confidence 4579999999999876554 1 3 778888732 11111111100 123
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
+ +.+++....+|++++|++++..++||+.+. ..+|+
T Consensus 81 ~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------------~~~l~ 116 (211)
T 2gs9_A 81 W---VRAWGEALPFPGESFDVVLLFTTLEFVEDV-----------------------------------------ERVLL 116 (211)
T ss_dssp E---ECCCTTSCCSCSSCEEEEEEESCTTTCSCH-----------------------------------------HHHHH
T ss_pred E---EEcccccCCCCCCcEEEEEEcChhhhcCCH-----------------------------------------HHHHH
Confidence 3 346666666889999999999999996421 12366
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcC
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREG 291 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~G 291 (380)
.-.+.|+|||+++++.+.+.. .|... ...+...|. ...-...+.|++|++.+++ |
T Consensus 117 ~~~~~L~pgG~l~i~~~~~~~----~~~~~---~~~~~~~~~-------~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 117 EARRVLRPGGALVVGVLEALS----PWAAL---YRRLGEKGV-------LPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp HHHHHEEEEEEEEEEEECTTS----HHHHH---HHHHHHTTC-------TTGGGCCCCCHHHHHHHHC--S
T ss_pred HHHHHcCCCCEEEEEecCCcC----cHHHH---HHHHhhccC-------ccccccccCCHHHHHHHhc--C
Confidence 668999999999999986642 22222 111212221 1112345689999999999 7
No 74
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.55 E-value=1.8e-07 Score=83.14 Aligned_cols=144 Identities=13% Similarity=0.064 Sum_probs=92.5
Q ss_pred EEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcceeec
Q 044727 65 RFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAA 144 (380)
Q Consensus 65 ~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~ 144 (380)
+|+|+|||+|..+..+... ..+++..|+... .+........ ..+ ..-.|
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-----------------~~~v~~vD~s~~-------~~~~a~~~~~-~~~---~~~~~--- 80 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-----------------GYEVTAVDQSSV-------GLAKAKQLAQ-EKG---VKITT--- 80 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-----------------TCEEEEECSSHH-------HHHHHHHHHH-HHT---CCEEE---
T ss_pred CEEEECCCCCHhHHHHHhC-----------------CCeEEEEECCHH-------HHHHHHHHHH-hcC---CceEE---
Confidence 9999999999988766211 257888887320 0000000011 111 01123
Q ss_pred cCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 044727 145 APGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSE 224 (380)
Q Consensus 145 vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 224 (380)
+.+++....+|++++|+++++. .|| +. .|...+|+.-.+
T Consensus 81 ~~~d~~~~~~~~~~fD~v~~~~-~~~----~~------------------------------------~~~~~~l~~~~~ 119 (202)
T 2kw5_A 81 VQSNLADFDIVADAWEGIVSIF-CHL----PS------------------------------------SLRQQLYPKVYQ 119 (202)
T ss_dssp ECCBTTTBSCCTTTCSEEEEEC-CCC----CH------------------------------------HHHHHHHHHHHT
T ss_pred EEcChhhcCCCcCCccEEEEEh-hcC----CH------------------------------------HHHHHHHHHHHH
Confidence 4567766668889999999853 344 11 133455777789
Q ss_pred HhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEEEeec
Q 044727 225 ELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLETSHIS 304 (380)
Q Consensus 225 eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~~~~~ 304 (380)
.|+|||++++..+...... + ..| ....+.+.++++|++..++ | |++..++....+
T Consensus 120 ~L~pgG~l~~~~~~~~~~~---~-----------~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~~~ 174 (202)
T 2kw5_A 120 GLKPGGVFILEGFAPEQLQ---Y-----------NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIANNLERN 174 (202)
T ss_dssp TCCSSEEEEEEEECTTTGG---G-----------TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEEEEEEE
T ss_pred hcCCCcEEEEEEecccccc---C-----------CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEEEEEee
Confidence 9999999999998764221 0 001 1234678899999999999 7 999999887765
Q ss_pred C
Q 044727 305 W 305 (380)
Q Consensus 305 ~ 305 (380)
.
T Consensus 175 ~ 175 (202)
T 2kw5_A 175 L 175 (202)
T ss_dssp C
T ss_pred c
Confidence 4
No 75
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.55 E-value=2.4e-07 Score=85.44 Aligned_cols=99 Identities=20% Similarity=0.204 Sum_probs=67.9
Q ss_pred cCCCcccCC-CCC---CccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 145 APGSFHGRL-FPP---CFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 145 vpgSFy~~l-~p~---~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
+.+++.+.. +++ +++|++++..+||++..- + .|...+|+
T Consensus 140 ~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~---~----------------------------------~~~~~~l~ 182 (265)
T 2i62_A 140 LKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPD---L----------------------------------PAYRTALR 182 (265)
T ss_dssp EECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS---H----------------------------------HHHHHHHH
T ss_pred EEeeeccCCCCCccccCCccEEEEhhhhhhhcCC---h----------------------------------HHHHHHHH
Confidence 446665433 356 899999999999975321 1 13445577
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.-++.|+|||+|++......... ..| ....+.+..+.+++..++++.| |++..++.
T Consensus 183 ~~~~~LkpgG~li~~~~~~~~~~---------------~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 238 (265)
T 2i62_A 183 NLGSLLKPGGFLVMVDALKSSYY---------------MIG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQFEV 238 (265)
T ss_dssp HHHTTEEEEEEEEEEEESSCCEE---------------EET--------TEEEECCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred HHHhhCCCCcEEEEEecCCCceE---------------EcC--------CccccccccCHHHHHHHHHHCC-CEEEEEEE
Confidence 77999999999999875332110 001 1223445678999999999999 99999887
Q ss_pred Eeec
Q 044727 301 SHIS 304 (380)
Q Consensus 301 ~~~~ 304 (380)
....
T Consensus 239 ~~~~ 242 (265)
T 2i62_A 239 ISQN 242 (265)
T ss_dssp ECCC
T ss_pred eccc
Confidence 7644
No 76
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.53 E-value=5.1e-07 Score=86.09 Aligned_cols=162 Identities=12% Similarity=0.100 Sum_probs=95.4
Q ss_pred CceEEEeecCCC--CccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCC-CC
Q 044727 62 DCIRFTDMGCSS--GPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDD-FG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~--G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~-~~ 138 (380)
..-+|+|+|||+ |.|+..+++.+ . |..+|+..|... .++.. .+....... ..
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~-------~-------P~arVv~VD~sp----------~mLa~-Ar~~l~~~~~~~ 132 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSV-------A-------PESRVVYVDNDP----------IVLTL-SQGLLASTPEGR 132 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHH-------C-------TTCEEEEEECCH----------HHHHT-THHHHCCCSSSE
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHH-------C-------CCCEEEEEeCCh----------HHHHH-HHHHhccCCCCc
Confidence 346899999998 77887775443 1 678999999732 12211 111000000 01
Q ss_pred cceeeccCCCcccC--CC--C--CCccc-----eEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHH
Q 044727 139 SCFIAAAPGSFHGR--LF--P--PCFLN-----LVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAY 207 (380)
Q Consensus 139 ~~f~~~vpgSFy~~--l~--p--~~svd-----l~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay 207 (380)
-.| +.+++.+. ++ | ..++| .++++.+||||.+-..
T Consensus 133 ~~~---v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~------------------------------- 178 (277)
T 3giw_A 133 TAY---VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDD------------------------------- 178 (277)
T ss_dssp EEE---EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGC-------------------------------
T ss_pred EEE---EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhh-------------------------------
Confidence 234 44666432 11 1 35566 4889999999754211
Q ss_pred HHHHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHH
Q 044727 208 LDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVI 287 (380)
Q Consensus 208 ~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~i 287 (380)
....|+.-.+.|+|||+|+++.+..+... ...+.+.+.++ . --.|+.++|.+|+...+
T Consensus 179 -------p~~~l~~l~~~L~PGG~Lvls~~~~d~~p-~~~~~~~~~~~---~-----------~g~p~~~rs~~ei~~~f 236 (277)
T 3giw_A 179 -------AVGIVRRLLEPLPSGSYLAMSIGTAEFAP-QEVGRVAREYA---A-----------RNMPMRLRTHAEAEEFF 236 (277)
T ss_dssp -------HHHHHHHHHTTSCTTCEEEEEEECCTTSH-HHHHHHHHHHH---H-----------TTCCCCCCCHHHHHHTT
T ss_pred -------HHHHHHHHHHhCCCCcEEEEEeccCCCCH-HHHHHHHHHHH---h-----------cCCCCccCCHHHHHHHh
Confidence 11126666889999999999999876221 11223322222 1 13488999999999999
Q ss_pred HhcCceeEeEEEEEe-ecCCc
Q 044727 288 EREGSFNIHQLETSH-ISWSV 307 (380)
Q Consensus 288 e~~GsF~I~~~e~~~-~~~~~ 307 (380)
+ | |++..--+.. ..|.+
T Consensus 237 ~--G-lelvePG~v~~~~Wrp 254 (277)
T 3giw_A 237 E--G-LELVEPGIVQVHKWHP 254 (277)
T ss_dssp T--T-SEECTTCSEEGGGSSC
T ss_pred C--C-CcccCCcEeecccccC
Confidence 5 7 8876654443 34655
No 77
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.53 E-value=6.4e-07 Score=85.41 Aligned_cols=158 Identities=11% Similarity=0.013 Sum_probs=96.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCC--c
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFG--S 139 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~--~ 139 (380)
...+|+|+|||+|..++.+... ..|..+|+..|+.. ......+......... -
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~--------------~~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~v 172 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYS--------------ACPGVQLVGIDYDP-----------EALDGATRLAAGHALAGQI 172 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCT--------------TCTTCEEEEEESCH-----------HHHHHHHHHHTTSTTGGGE
T ss_pred CCCEEEEecCCCCHHHHHHHHh--------------cCCCCeEEEEECCH-----------HHHHHHHHHHHhcCCCCce
Confidence 4589999999999988766211 12568999999842 1111111111000001 1
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
.| +.+++....++ +++|++++..++||+.+.. ....||
T Consensus 173 ~~---~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~--------------------------------------~~~~~l 210 (305)
T 3ocj_A 173 TL---HRQDAWKLDTR-EGYDLLTSNGLNIYEPDDA--------------------------------------RVTELY 210 (305)
T ss_dssp EE---EECCGGGCCCC-SCEEEEECCSSGGGCCCHH--------------------------------------HHHHHH
T ss_pred EE---EECchhcCCcc-CCeEEEEECChhhhcCCHH--------------------------------------HHHHHH
Confidence 23 45888777777 9999999999999853310 122357
Q ss_pred HHHHHHhccCceEEEEeccCCCcc---------h---hHHHHHHHHHHHHHHccCcccccccccccCc-ccCCHHHHHHH
Q 044727 220 KFRSEELKTEGRMVLNFIGNDKYH---------T---GVFELMGMVLNDMVYEGLIEVSKLESFHFPM-YNPCVEEVRQV 286 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g~~~~~---------~---~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-Y~ps~eE~~~~ 286 (380)
+.-.+.|+|||++++....+.+.. . .........+.+ + ....+ .+++.+|+...
T Consensus 211 ~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~----~---------~~~~~~~~~~~~~~~~~ 277 (305)
T 3ocj_A 211 RRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTR----L---------IQPRWNALRTHAQTRAQ 277 (305)
T ss_dssp HHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHH----T---------TCCSCCCCCCHHHHHHH
T ss_pred HHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHH----H---------HhhhhhccCCHHHHHHH
Confidence 777899999999999998765211 0 000111111111 1 11111 45799999999
Q ss_pred HHhcCceeEeEEEE
Q 044727 287 IEREGSFNIHQLET 300 (380)
Q Consensus 287 ie~~GsF~I~~~e~ 300 (380)
+++.| |++.+++.
T Consensus 278 l~~aG-F~~v~~~~ 290 (305)
T 3ocj_A 278 LEEAG-FTDLRFED 290 (305)
T ss_dssp HHHTT-CEEEEEEC
T ss_pred HHHCC-CEEEEEEc
Confidence 99999 99988775
No 78
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.51 E-value=1.3e-06 Score=85.86 Aligned_cols=148 Identities=18% Similarity=0.188 Sum_probs=92.1
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
++..+|+|+|||+|..+..+... + |..+++.-|+|. .-...+. .++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~--------~-------~~~~~~~~D~~~--~~~~a~~----------------~~~- 253 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISK--------Y-------PLIKGINFDLPQ--VIENAPP----------------LSG- 253 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH--------C-------TTCEEEEEECHH--HHTTCCC----------------CTT-
T ss_pred CCCCEEEEeCCCCcHHHHHHHHH--------C-------CCCeEEEeChHH--HHHhhhh----------------cCC-
Confidence 34689999999999998877332 2 568888889842 1111110 011
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
+.-+.|+|++ .+|. +|+++++++||++++ . +...+|+
T Consensus 254 -v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d---~------------------------------------~~~~~l~ 290 (372)
T 1fp1_D 254 -IEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD---E------------------------------------KCIEFLS 290 (372)
T ss_dssp -EEEEECCTTT-CCCC--EEEEEEESSGGGSCH---H------------------------------------HHHHHHH
T ss_pred -CEEEeCCccc-CCCC--CCEEEEecccccCCH---H------------------------------------HHHHHHH
Confidence 2336689977 5676 899999999997432 1 1234588
Q ss_pred HHHHHhccCceEEEEeccCC-CcchhHHHHHHHHHHHH---HHccCcccccccccccCcccCCHHHHHHHHHhcCceeEe
Q 044727 221 FRSEELKTEGRMVLNFIGND-KYHTGVFELMGMVLNDM---VYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIH 296 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~-~~~~~~~~~l~~al~~m---v~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~ 296 (380)
.-++.|+|||++++.-...+ .......+.. ..+.++ +..| -..++.+|++.++++.| |++.
T Consensus 291 ~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~-~~~~d~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~ 355 (372)
T 1fp1_D 291 NCHKALSPNGKVIIVEFILPEEPNTSEESKL-VSTLDNLMFITVG-------------GRERTEKQYEKLSKLSG-FSKF 355 (372)
T ss_dssp HHHHHEEEEEEEEEEEEEECSSCCSSHHHHH-HHHHHHHHHHHHS-------------CCCEEHHHHHHHHHHTT-CSEE
T ss_pred HHHHhcCCCCEEEEEEeccCCCCccchHHHH-HHHhhHHHHhccC-------------CccCCHHHHHHHHHHCC-CceE
Confidence 88999999999998854322 1110111100 111111 1111 12358999999999999 9987
Q ss_pred EEEE
Q 044727 297 QLET 300 (380)
Q Consensus 297 ~~e~ 300 (380)
++..
T Consensus 356 ~~~~ 359 (372)
T 1fp1_D 356 QVAC 359 (372)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 79
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.51 E-value=9.6e-08 Score=88.85 Aligned_cols=155 Identities=14% Similarity=0.186 Sum_probs=92.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.. . ..+++..|+.. ......+.. . ...+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~gvD~s~-----------~~l~~a~~~-~----~~~~ 100 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQE--------R---------GFEVVLVDPSK-----------EMLEVAREK-G----VKNV 100 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHT--------T---------TCEEEEEESCH-----------HHHHHHHHH-T----CSCE
T ss_pred CCCeEEEeCCCcCHHHHHHHH--------c---------CCeEEEEeCCH-----------HHHHHHHhh-c----CCCE
Confidence 457999999999998886621 1 25788888732 111112111 1 1124
Q ss_pred eeccCCCcccCCCCCCccceEEccc-ccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSF-CLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~-alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
+.+++....+|++++|++++.. .+||..+ | ..+|+
T Consensus 101 ---~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~----------------------------------------~~~l~ 136 (260)
T 2avn_A 101 ---VEAKAEDLPFPSGAFEAVLALGDVLSYVEN-K----------------------------------------DKAFS 136 (260)
T ss_dssp ---EECCTTSCCSCTTCEEEEEECSSHHHHCSC-H----------------------------------------HHHHH
T ss_pred ---EECcHHHCCCCCCCEEEEEEcchhhhcccc-H----------------------------------------HHHHH
Confidence 3367766668899999999976 5677433 1 12366
Q ss_pred HHHHHhccCceEEEEeccCCCc-ch----hHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKY-HT----GVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNI 295 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~-~~----~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I 295 (380)
.-.+.|+|||++++.++++... .. ..|+. +......|...... ....++.++.+++|+..+ .| |++
T Consensus 137 ~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~ 207 (260)
T 2avn_A 137 EIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQ----ITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FET 207 (260)
T ss_dssp HHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHH----HHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEE
T ss_pred HHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHH----HHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceE
Confidence 6789999999999998865310 00 01111 22223334322110 011123347899999988 88 998
Q ss_pred eEEEEEe
Q 044727 296 HQLETSH 302 (380)
Q Consensus 296 ~~~e~~~ 302 (380)
.++....
T Consensus 208 ~~~~~~~ 214 (260)
T 2avn_A 208 VDIRGIG 214 (260)
T ss_dssp EEEEEEC
T ss_pred EEEECCC
Confidence 8777554
No 80
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.50 E-value=1.2e-06 Score=79.44 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=66.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... + +++..|+.. ......+... . +-.|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~---------------~--~v~~~D~s~-----------~~~~~a~~~~--~--~~~~ 87 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF---------------G--DTAGLELSE-----------DMLTHARKRL--P--DATL 87 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH---------------S--EEEEEESCH-----------HHHHHHHHHC--T--TCEE
T ss_pred CCCeEEEecccCCHHHHHHHHhC---------------C--cEEEEeCCH-----------HHHHHHHHhC--C--CCEE
Confidence 45799999999999988773321 2 677778632 1111111111 0 1233
Q ss_pred eeccCCCcccCCCCCCccceEEc-ccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYS-SFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~S-s~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
+.+++....+ ++++|+++| ..++||+... .|+..+|+
T Consensus 88 ---~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~--------------------------------------~~~~~~l~ 125 (239)
T 3bxo_A 88 ---HQGDMRDFRL-GRKFSAVVSMFSSVGYLKTT--------------------------------------EELGAAVA 125 (239)
T ss_dssp ---EECCTTTCCC-SSCEEEEEECTTGGGGCCSH--------------------------------------HHHHHHHH
T ss_pred ---EECCHHHccc-CCCCcEEEEcCchHhhcCCH--------------------------------------HHHHHHHH
Confidence 3366655444 789999995 4599995331 14455688
Q ss_pred HHHHHhccCceEEEEeccC
Q 044727 221 FRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~ 239 (380)
.-.+.|+|||++++.....
T Consensus 126 ~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 126 SFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp HHHHTEEEEEEEEECCCCC
T ss_pred HHHHhcCCCeEEEEEeccC
Confidence 8899999999999986544
No 81
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.49 E-value=1.3e-06 Score=84.98 Aligned_cols=157 Identities=17% Similarity=0.164 Sum_probs=94.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
+..+|+|+|||+|..+..+... + |..+++..|+|. .-...+ .... ..+.. .+-.|
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~--------~-------~~~~~~~~D~~~--~~~~a~------~~~~-~~~~~-~~v~~ 237 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARR--------A-------PHVSATVLEMAG--TVDTAR------SYLK-DEGLS-DRVDV 237 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH--------C-------TTCEEEEEECTT--HHHHHH------HHHH-HTTCT-TTEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHh--------C-------CCCEEEEecCHH--HHHHHH------HHHH-hcCCC-CceEE
Confidence 4579999999999988777332 1 568888899842 111111 0111 11100 01233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++.+ .+|.+ +|+++++..+|.+ |.. +...+|+.
T Consensus 238 ---~~~d~~~-~~~~~-~D~v~~~~vl~~~---~~~------------------------------------~~~~~l~~ 273 (360)
T 1tw3_A 238 ---VEGDFFE-PLPRK-ADAIILSFVLLNW---PDH------------------------------------DAVRILTR 273 (360)
T ss_dssp ---EECCTTS-CCSSC-EEEEEEESCGGGS---CHH------------------------------------HHHHHHHH
T ss_pred ---EeCCCCC-CCCCC-ccEEEEcccccCC---CHH------------------------------------HHHHHHHH
Confidence 5588875 45654 9999999999863 211 22345777
Q ss_pred HHHHhccCceEEEEecc-CC-CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEE
Q 044727 222 RSEELKTEGRMVLNFIG-ND-KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLE 299 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g-~~-~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e 299 (380)
-.+.|+|||++++.-.. .. ... ..+..+.+... ++..| ...++.+|++.++++.| |++.++.
T Consensus 274 ~~~~L~pgG~l~i~e~~~~~~~~~-~~~~~~~~~~~-~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~ 337 (360)
T 1tw3_A 274 CAEALEPGGRILIHERDDLHENSF-NEQFTELDLRM-LVFLG-------------GALRTREKWDGLAASAG-LVVEEVR 337 (360)
T ss_dssp HHHTEEEEEEEEEEECCBCGGGCC-SHHHHHHHHHH-HHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEE
T ss_pred HHHhcCCCcEEEEEEEeccCCCCC-cchhhhccHHH-hhhcC-------------CcCCCHHHHHHHHHHCC-CeEEEEE
Confidence 78999999999988655 22 111 11111111111 11111 23579999999999999 9998877
Q ss_pred EEee
Q 044727 300 TSHI 303 (380)
Q Consensus 300 ~~~~ 303 (380)
....
T Consensus 338 ~~~~ 341 (360)
T 1tw3_A 338 QLPS 341 (360)
T ss_dssp EEEC
T ss_pred eCCC
Confidence 6543
No 82
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.45 E-value=2.9e-07 Score=82.66 Aligned_cols=112 Identities=14% Similarity=0.124 Sum_probs=78.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+ . .+++..|+... . ..|
T Consensus 67 ~~~~vLDiG~G~G~~~~~l-------------------~-~~v~~~D~s~~----------~---------------~~~ 101 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI-------------------R-NPVHCFDLASL----------D---------------PRV 101 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC-------------------C-SCEEEEESSCS----------S---------------TTE
T ss_pred CCCeEEEECCcCCHHHHHh-------------------h-ccEEEEeCCCC----------C---------------ceE
Confidence 3579999999999977655 1 46777787543 0 012
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|+++++.++|| .+ ...+|+.
T Consensus 102 ---~~~d~~~~~~~~~~fD~v~~~~~l~~-~~-----------------------------------------~~~~l~~ 136 (215)
T 2zfu_A 102 ---TVCDMAQVPLEDESVDVAVFCLSLMG-TN-----------------------------------------IRDFLEE 136 (215)
T ss_dssp ---EESCTTSCSCCTTCEEEEEEESCCCS-SC-----------------------------------------HHHHHHH
T ss_pred ---EEeccccCCCCCCCEeEEEEehhccc-cC-----------------------------------------HHHHHHH
Confidence 22455555578899999999999996 11 1123666
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-++.|+|||++++..+... +++.+++...+++.| |++.....
T Consensus 137 ~~~~L~~gG~l~i~~~~~~------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~ 178 (215)
T 2zfu_A 137 ANRVLKPGGLLKVAEVSSR------------------------------------FEDVRTFLRAVTKLG-FKIVSKDL 178 (215)
T ss_dssp HHHHEEEEEEEEEEECGGG------------------------------------CSCHHHHHHHHHHTT-EEEEEEEC
T ss_pred HHHhCCCCeEEEEEEcCCC------------------------------------CCCHHHHHHHHHHCC-CEEEEEec
Confidence 6889999999999854210 128899999999999 98877553
No 83
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.44 E-value=1.8e-06 Score=81.37 Aligned_cols=156 Identities=9% Similarity=0.019 Sum_probs=91.2
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCC-cceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPP-ILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGS 139 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p-~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 139 (380)
.++.+|+|+|||+|..+..+.... | ..+|+..|+.. ......+........+-
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~v 74 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLL---------------PEGSKYTGIDSGE-----------TLLAEARELFRLLPYDS 74 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTS---------------CTTCEEEEEESCH-----------HHHHHHHHHHHSSSSEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC---------------CCCCEEEEEECCH-----------HHHHHHHHHHHhcCCce
Confidence 356899999999999888772221 3 37899999842 11111111100000111
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
.| +-+++.+..+ ++++|++++..++|++.+.+ .+|
T Consensus 75 ~~---~~~d~~~~~~-~~~fD~v~~~~~l~~~~~~~-----------------------------------------~~l 109 (284)
T 3gu3_A 75 EF---LEGDATEIEL-NDKYDIAICHAFLLHMTTPE-----------------------------------------TML 109 (284)
T ss_dssp EE---EESCTTTCCC-SSCEEEEEEESCGGGCSSHH-----------------------------------------HHH
T ss_pred EE---EEcchhhcCc-CCCeeEEEECChhhcCCCHH-----------------------------------------HHH
Confidence 33 4477766555 57999999999999964321 236
Q ss_pred HHHHHHhccCceEEEEecc-----CC-----Ccc-h-hHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHH
Q 044727 220 KFRSEELKTEGRMVLNFIG-----ND-----KYH-T-GVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVI 287 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g-----~~-----~~~-~-~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~i 287 (380)
+.-.+.|+|||++++..+. .. ... . .....+...+.+... ......++.+++...+
T Consensus 110 ~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~l 177 (284)
T 3gu3_A 110 QKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQ------------RNGKDGNIGMKIPIYL 177 (284)
T ss_dssp HHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHH------------HTCCCTTGGGTHHHHH
T ss_pred HHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhh------------hhcccccHHHHHHHHH
Confidence 6668899999999988765 11 000 0 001222222222111 1112344567899999
Q ss_pred HhcCceeEeEEEE
Q 044727 288 EREGSFNIHQLET 300 (380)
Q Consensus 288 e~~GsF~I~~~e~ 300 (380)
++.| |+..+...
T Consensus 178 ~~aG-F~~v~~~~ 189 (284)
T 3gu3_A 178 SELG-VKNIECRV 189 (284)
T ss_dssp HHTT-CEEEEEEE
T ss_pred HHcC-CCeEEEEE
Confidence 9999 98777644
No 84
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.41 E-value=1.4e-06 Score=78.49 Aligned_cols=164 Identities=15% Similarity=0.139 Sum_probs=93.6
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
.-+|+|+|||+|..++.+.... |..+++..|+.. ... ...+. ..+.. +-
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~---------------p~~~v~gvD~s~----------~~l-~~a~~~~~~~~~~--~v 93 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQN---------------PDINYIGIDIQK----------SVL-SYALDKVLEVGVP--NI 93 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHC---------------TTSEEEEEESCH----------HHH-HHHHHHHHHHCCS--SE
T ss_pred CCeEEEEccCcCHHHHHHHHHC---------------CCCCEEEEEcCH----------HHH-HHHHHHHHHcCCC--CE
Confidence 4689999999999988773321 568999999842 111 11111 11101 12
Q ss_pred ceeeccCCCccc--CCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHG--RLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 140 ~f~~~vpgSFy~--~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
.|+ .++... ..+|++++|++++.+..+|...- ... .. -+...
T Consensus 94 ~~~---~~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~---~~~---------~~---------------------~~~~~ 137 (214)
T 1yzh_A 94 KLL---WVDGSDLTDYFEDGEIDRLYLNFSDPWPKKR---HEK---------RR---------------------LTYKT 137 (214)
T ss_dssp EEE---ECCSSCGGGTSCTTCCSEEEEESCCCCCSGG---GGG---------GS---------------------TTSHH
T ss_pred EEE---eCCHHHHHhhcCCCCCCEEEEECCCCccccc---hhh---------hc---------------------cCCHH
Confidence 343 355544 33789999999999776663310 000 00 01234
Q ss_pred HHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccc-cccccCcccCCHHHHHHHHHhcCceeEe
Q 044727 218 FLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKL-ESFHFPMYNPCVEEVRQVIEREGSFNIH 296 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~-d~f~~P~Y~ps~eE~~~~ie~~GsF~I~ 296 (380)
||+.-++.|+|||.+++.+-.. ... ..++..+.+.|.-..+.. |-...+.......+|+.-+...| +.|.
T Consensus 138 ~l~~~~~~LkpgG~l~~~~~~~-----~~~---~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~~i~ 208 (214)
T 1yzh_A 138 FLDTFKRILPENGEIHFKTDNR-----GLF---EYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-QVIY 208 (214)
T ss_dssp HHHHHHHHSCTTCEEEEEESCH-----HHH---HHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-CCCE
T ss_pred HHHHHHHHcCCCcEEEEEeCCH-----HHH---HHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-CCeE
Confidence 5777789999999999976422 122 222334444464322221 32333344445568888888888 7776
Q ss_pred EEE
Q 044727 297 QLE 299 (380)
Q Consensus 297 ~~e 299 (380)
+++
T Consensus 209 ~~~ 211 (214)
T 1yzh_A 209 RVE 211 (214)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 85
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.40 E-value=7.3e-07 Score=83.89 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=71.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhh---cCCC-CC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTE---RGHD-DF 137 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~---~~~~-~~ 137 (380)
...+|+|+|||+|..++.+... ..+|+..|+.. .+. ...+.. .+.. ..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~gvD~s~----------~~l-~~a~~~~~~~~~~~~~ 108 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE-----------------GFSVTSVDASD----------KML-KYALKERWNRRKEPAF 108 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT-----------------TCEEEEEESCH----------HHH-HHHHHHHHHTTTSHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHC-----------------CCeEEEEECCH----------HHH-HHHHHhhhhccccccc
Confidence 3579999999999988776221 24888889843 111 111100 0000 00
Q ss_pred -CcceeeccCCCcccCC---CCCCccceEEcc-cccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHH
Q 044727 138 -GSCFIAAAPGSFHGRL---FPPCFLNLVYSS-FCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFE 212 (380)
Q Consensus 138 -~~~f~~~vpgSFy~~l---~p~~svdl~~Ss-~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~ 212 (380)
.-.+ +.+++.... ++++++|+|++. .++|++.+.... .
T Consensus 109 ~~~~~---~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~----------------------~------------ 151 (293)
T 3thr_A 109 DKWVI---EEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD----------------------Q------------ 151 (293)
T ss_dssp HTCEE---EECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS----------------------S------------
T ss_pred ceeeE---eecChhhCccccccCCCeEEEEEcChHHhhcCccccC----------------------H------------
Confidence 1122 335655544 799999999998 899997664322 0
Q ss_pred HHHHHHHHHHHHHhccCceEEEEecc
Q 044727 213 IDFTSFLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 213 ~D~~~FL~~Ra~eL~pgG~l~~~~~g 238 (380)
.++..+|+.-++.|+|||++++....
T Consensus 152 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 152 SEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 24566788889999999999999864
No 86
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.40 E-value=1.5e-06 Score=84.82 Aligned_cols=147 Identities=18% Similarity=0.162 Sum_probs=91.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... |..+++.-|+|. .- ..... .++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~---------------p~~~~~~~D~~~--~~---~~a~~-------------~~~-- 237 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIF---------------PHLKCTVFDQPQ--VV---GNLTG-------------NEN-- 237 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC---------------TTSEEEEEECHH--HH---SSCCC-------------CSS--
T ss_pred CCCEEEEECCCcCHHHHHHHHHC---------------CCCeEEEeccHH--HH---hhccc-------------CCC--
Confidence 34799999999999888773332 567888889852 11 11110 012
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.-+.|+|+. .+| ++|++++++.||++++ . +...+|+.
T Consensus 238 v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d---~------------------------------------~~~~~l~~ 275 (358)
T 1zg3_A 238 LNFVGGDMFK-SIP--SADAVLLKWVLHDWND---E------------------------------------QSLKILKN 275 (358)
T ss_dssp EEEEECCTTT-CCC--CCSEEEEESCGGGSCH---H------------------------------------HHHHHHHH
T ss_pred cEEEeCccCC-CCC--CceEEEEcccccCCCH---H------------------------------------HHHHHHHH
Confidence 3336689987 666 4999999999997432 1 12245778
Q ss_pred HHHHhcc---CceEEEEeccCC-CcchhHHHHHHHHHHHH---HHccCcccccccccccCcccCCHHHHHHHHHhcCcee
Q 044727 222 RSEELKT---EGRMVLNFIGND-KYHTGVFELMGMVLNDM---VYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFN 294 (380)
Q Consensus 222 Ra~eL~p---gG~l~~~~~g~~-~~~~~~~~~l~~al~~m---v~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~ 294 (380)
-.+.|+| ||++++.-.... ....+.+.. ...+.++ +..| -..++.+|+++++++.| |+
T Consensus 276 ~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~-~~~~~d~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~ 340 (358)
T 1zg3_A 276 SKEAISHKGKDGKVIIIDISIDETSDDRGLTE-LQLDYDLVMLTMFL-------------GKERTKQEWEKLIYDAG-FS 340 (358)
T ss_dssp HHHHTGGGGGGCEEEEEECEECTTCSCHHHHH-HHHHHHHHHHHHHS-------------CCCEEHHHHHHHHHHTT-CC
T ss_pred HHHhCCCCCCCcEEEEEEeccCCCCccchhhh-HHHhhCHHHhccCC-------------CCCCCHHHHHHHHHHcC-CC
Confidence 8999999 999998654332 111000000 0111111 1111 12469999999999999 99
Q ss_pred EeEEEE
Q 044727 295 IHQLET 300 (380)
Q Consensus 295 I~~~e~ 300 (380)
+.++..
T Consensus 341 ~~~~~~ 346 (358)
T 1zg3_A 341 SYKITP 346 (358)
T ss_dssp EEEEEE
T ss_pred eeEEEe
Confidence 877654
No 87
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.40 E-value=5.4e-07 Score=80.81 Aligned_cols=107 Identities=12% Similarity=0.080 Sum_probs=70.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ..+++..|+.. ......+.... ....-.|
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~~-~~~~~~~ 101 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH-----------------CKRLTVIDVMP-----------RAIGRACQRTK-RWSHISW 101 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG-----------------EEEEEEEESCH-----------HHHHHHHHHTT-TCSSEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHHc-----------------CCEEEEEECCH-----------HHHHHHHHhcc-cCCCeEE
Confidence 4689999999999988776211 15788888732 11111111111 1001233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++.... |++++|+++++.++||+.+. .++..+|+.
T Consensus 102 ---~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~~~~l~~ 139 (216)
T 3ofk_A 102 ---AATDILQFS-TAELFDLIVVAEVLYYLEDM--------------------------------------TQMRTAIDN 139 (216)
T ss_dssp ---EECCTTTCC-CSCCEEEEEEESCGGGSSSH--------------------------------------HHHHHHHHH
T ss_pred ---EEcchhhCC-CCCCccEEEEccHHHhCCCH--------------------------------------HHHHHHHHH
Confidence 447775444 89999999999999996542 123445777
Q ss_pred HHHHhccCceEEEEeccC
Q 044727 222 RSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~ 239 (380)
-++.|+|||.++++....
T Consensus 140 ~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 140 MVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHTEEEEEEEEEEEECH
T ss_pred HHHHcCCCCEEEEEecCC
Confidence 899999999999988644
No 88
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.39 E-value=4.7e-06 Score=81.13 Aligned_cols=149 Identities=18% Similarity=0.229 Sum_probs=91.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... + |..+++.-|+|. . ...... .++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~--~---~~~a~~-------------~~~-- 232 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICET--------F-------PKLKCIVFDRPQ--V---VENLSG-------------SNN-- 232 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH--------C-------TTCEEEEEECHH--H---HTTCCC-------------BTT--
T ss_pred cCceEEEeCCCccHHHHHHHHH--------C-------CCCeEEEeeCHH--H---Hhhccc-------------CCC--
Confidence 4579999999999888777332 2 567899999842 1 110100 012
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.-+.|+|++ .+|+ +|+++++++||.+++ . +...+|+.
T Consensus 233 v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d---~------------------------------------~~~~~l~~ 270 (352)
T 1fp2_A 233 LTYVGGDMFT-SIPN--ADAVLLKYILHNWTD---K------------------------------------DCLRILKK 270 (352)
T ss_dssp EEEEECCTTT-CCCC--CSEEEEESCGGGSCH---H------------------------------------HHHHHHHH
T ss_pred cEEEeccccC-CCCC--ccEEEeehhhccCCH---H------------------------------------HHHHHHHH
Confidence 3336689977 5674 999999999995322 1 12244777
Q ss_pred HHHHhcc---CceEEEEeccCC-CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeE
Q 044727 222 RSEELKT---EGRMVLNFIGND-KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQ 297 (380)
Q Consensus 222 Ra~eL~p---gG~l~~~~~g~~-~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~ 297 (380)
-++.|+| ||++++.-.... ......+... ..+.++.. +. + +-..++.+|+++++++.| |++.+
T Consensus 271 ~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~-~~~~d~~~--~~-------~--~g~~~t~~e~~~ll~~aG-f~~~~ 337 (352)
T 1fp2_A 271 CKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQI-KLLMDVNM--AC-------L--NGKERNEEEWKKLFIEAG-FQHYK 337 (352)
T ss_dssp HHHHHSGGGCCCEEEEEECEECTTTSCHHHHHH-HHHHHHHG--GG-------G--TCCCEEHHHHHHHHHHTT-CCEEE
T ss_pred HHHhCCCCCCCcEEEEEEeecCCCCCccchhhh-HhhccHHH--Hh-------c--cCCCCCHHHHHHHHHHCC-CCeeE
Confidence 8999999 999998865433 1110111111 11222211 00 1 123468999999999999 98877
Q ss_pred EEE
Q 044727 298 LET 300 (380)
Q Consensus 298 ~e~ 300 (380)
+..
T Consensus 338 ~~~ 340 (352)
T 1fp2_A 338 ISP 340 (352)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 89
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.39 E-value=3.1e-06 Score=73.68 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=84.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ..+++..|... ......+... . +..+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~~D~~~-----------~~~~~a~~~~--~--~~~~ 93 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ-----------------GHDVLGTDLDP-----------ILIDYAKQDF--P--EARW 93 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHHHC--T--TSEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC-----------------CCcEEEEcCCH-----------HHHHHHHHhC--C--CCcE
Confidence 4579999999999988766221 25788888632 1111111111 0 1123
Q ss_pred eeccCCCcccCCCCCCccceEEcc-cccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSS-FCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss-~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
+.+++....+|++++|+++++ ..+|+++. .+...+|+
T Consensus 94 ---~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~---------------------------------------~~~~~~l~ 131 (195)
T 3cgg_A 94 ---VVGDLSVDQISETDFDLIVSAGNVMGFLAE---------------------------------------DGREPALA 131 (195)
T ss_dssp ---EECCTTTSCCCCCCEEEEEECCCCGGGSCH---------------------------------------HHHHHHHH
T ss_pred ---EEcccccCCCCCCceeEEEECCcHHhhcCh---------------------------------------HHHHHHHH
Confidence 346666656788999999998 67777421 12345677
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLE 299 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e 299 (380)
.-.+.|+|||.+++.+.... ..+.+++...++..| |++....
T Consensus 132 ~~~~~l~~~G~l~~~~~~~~------------------------------------~~~~~~~~~~l~~~G-f~~~~~~ 173 (195)
T 3cgg_A 132 NIHRALGADGRAVIGFGAGR------------------------------------GWVFGDFLEVAERVG-LELENAF 173 (195)
T ss_dssp HHHHHEEEEEEEEEEEETTS------------------------------------SCCHHHHHHHHHHHT-EEEEEEE
T ss_pred HHHHHhCCCCEEEEEeCCCC------------------------------------CcCHHHHHHHHHHcC-CEEeeee
Confidence 78899999999999875321 046788999999888 8876654
No 90
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.39 E-value=1.3e-06 Score=78.70 Aligned_cols=159 Identities=9% Similarity=0.036 Sum_probs=87.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCc-c
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGS-C 140 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 140 (380)
...+|+|+|||+|..+..+... + |..+|+..|+...=...+. ...+........++ .
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~--------~-------p~~~v~gvD~s~~~l~~~~-------~~a~~~~~~~~~~~v~ 84 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQ--------N-------PSRLVVALDADKSRMEKIS-------AKAAAKPAKGGLPNLL 84 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHH--------C-------TTEEEEEEESCGGGGHHHH-------HHHTSCGGGTCCTTEE
T ss_pred CCCEEEEecCCCCHHHHHHHHH--------C-------CCCEEEEEECCHHHHHHHH-------HHHHHhhhhcCCCceE
Confidence 4589999999999999887332 1 5689999998541111000 00100000011122 3
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +-+++....+++++ |.++ ..+.|.......+. |...+|+
T Consensus 85 ~---~~~d~~~l~~~~~~-d~v~--~~~~~~~~~~~~~~----------------------------------~~~~~l~ 124 (218)
T 3mq2_A 85 Y---LWATAERLPPLSGV-GELH--VLMPWGSLLRGVLG----------------------------------SSPEMLR 124 (218)
T ss_dssp E---EECCSTTCCSCCCE-EEEE--EESCCHHHHHHHHT----------------------------------SSSHHHH
T ss_pred E---EecchhhCCCCCCC-CEEE--EEccchhhhhhhhc----------------------------------cHHHHHH
Confidence 4 44788777777777 7777 33334332111111 1123467
Q ss_pred HHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 221 FRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.-++.|||||++++.+........ +. ++.....+......+++...++..| |+|..++.
T Consensus 125 ~~~~~LkpgG~l~~~~~~~~~~~~------------------~~--~~~~~~~~~~~~~~~~l~~~l~~aG-f~i~~~~~ 183 (218)
T 3mq2_A 125 GMAAVCRPGASFLVALNLHAWRPS------------------VP--EVGEHPEPTPDSADEWLAPRYAEAG-WKLADCRY 183 (218)
T ss_dssp HHHHTEEEEEEEEEEEEGGGBTTB------------------CG--GGTTCCCCCHHHHHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHHHcCCCcEEEEEecccccccc------------------cc--ccccCCccchHHHHHHHHHHHHHcC-CCceeeec
Confidence 778999999999997653321100 00 0111111111123456888999999 99999987
Q ss_pred Eee
Q 044727 301 SHI 303 (380)
Q Consensus 301 ~~~ 303 (380)
+..
T Consensus 184 ~~~ 186 (218)
T 3mq2_A 184 LEP 186 (218)
T ss_dssp ECH
T ss_pred cch
Confidence 753
No 91
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.39 E-value=8e-07 Score=84.54 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=41.8
Q ss_pred cCCCcccCC-----CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 145 APGSFHGRL-----FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 145 vpgSFy~~l-----~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
+.+++.... ++++++|+|++...+||+.-. .-..++..+|
T Consensus 159 ~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~-----------------------------------~~~~~~~~~l 203 (292)
T 3g07_A 159 VTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLN-----------------------------------WGDEGLKRMF 203 (292)
T ss_dssp EECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHH-----------------------------------HHHHHHHHHH
T ss_pred EecccccCccccccccCCCcCEEEEChHHHHhhhc-----------------------------------CCHHHHHHHH
Confidence 346665433 578999999999999995310 0013556678
Q ss_pred HHHHHHhccCceEEEEec
Q 044727 220 KFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~ 237 (380)
+.-++.|+|||+|++...
T Consensus 204 ~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhCCCcEEEEecC
Confidence 888999999999999753
No 92
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.38 E-value=2.6e-06 Score=74.11 Aligned_cols=70 Identities=9% Similarity=0.039 Sum_probs=52.1
Q ss_pred CCCccceEEcccccccc-cCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEE
Q 044727 155 PPCFLNLVYSSFCLHWL-SRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMV 233 (380)
Q Consensus 155 p~~svdl~~Ss~alhWl-s~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~ 233 (380)
|++++|+++|++++||+ .+.+ .+|+.-++.|||||+++
T Consensus 60 ~~~~fD~V~~~~~l~~~~~~~~-----------------------------------------~~l~~~~r~LkpgG~l~ 98 (176)
T 2ld4_A 60 KESSFDIILSGLVPGSTTLHSA-----------------------------------------EILAEIARILRPGGCLF 98 (176)
T ss_dssp CSSCEEEEEECCSTTCCCCCCH-----------------------------------------HHHHHHHHHEEEEEEEE
T ss_pred CCCCEeEEEECChhhhcccCHH-----------------------------------------HHHHHHHHHCCCCEEEE
Confidence 78899999999999997 3221 12667799999999999
Q ss_pred EEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEe
Q 044727 234 LNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIH 296 (380)
Q Consensus 234 ~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~ 296 (380)
+....... .+ .+.|.++.+|+...+++.| | |+
T Consensus 99 ~~~~~~~~------------------~~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 99 LKEPVETA------------------VD-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp EEEEEESS------------------SC-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred EEcccccc------------------cc-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 95321100 00 1677789999999999999 8 66
No 93
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.38 E-value=1.2e-06 Score=75.53 Aligned_cols=131 Identities=11% Similarity=0.077 Sum_probs=84.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... - .+++..|+.. ......+.. . . .-.|
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~----------------~-~~v~~vD~s~-----------~~~~~a~~~-~-~--~v~~ 64 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEF----------------A-TKLYCIDINV-----------IALKEVKEK-F-D--SVIT 64 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTT----------------E-EEEEEECSCH-----------HHHHHHHHH-C-T--TSEE
T ss_pred CCCeEEEECCCCCHHHHHHHhh----------------c-CeEEEEeCCH-----------HHHHHHHHh-C-C--CcEE
Confidence 4579999999999998877211 1 3788888732 111111111 1 1 1233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
. .++ ..+|++++|+++++.++||+.+. ..+|+.
T Consensus 65 ~---~~d---~~~~~~~~D~v~~~~~l~~~~~~-----------------------------------------~~~l~~ 97 (170)
T 3i9f_A 65 L---SDP---KEIPDNSVDFILFANSFHDMDDK-----------------------------------------QHVISE 97 (170)
T ss_dssp E---SSG---GGSCTTCEEEEEEESCSTTCSCH-----------------------------------------HHHHHH
T ss_pred E---eCC---CCCCCCceEEEEEccchhcccCH-----------------------------------------HHHHHH
Confidence 2 244 55789999999999999996321 123666
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
-.+.|+|||++++..+....... + . ......+.+|++..++ | |++.+.+.
T Consensus 98 ~~~~L~pgG~l~~~~~~~~~~~~----------------~---~-------~~~~~~~~~~~~~~l~--G-f~~~~~~~ 147 (170)
T 3i9f_A 98 VKRILKDDGRVIIIDWRKENTGI----------------G---P-------PLSIRMDEKDYMGWFS--N-FVVEKRFN 147 (170)
T ss_dssp HHHHEEEEEEEEEEEECSSCCSS----------------S---S-------CGGGCCCHHHHHHHTT--T-EEEEEEEC
T ss_pred HHHhcCCCCEEEEEEcCcccccc----------------C---c-------hHhhhcCHHHHHHHHh--C-cEEEEccC
Confidence 68899999999999776542110 0 0 0123368999999999 7 99877654
No 94
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.37 E-value=3.5e-07 Score=82.34 Aligned_cols=107 Identities=18% Similarity=0.196 Sum_probs=66.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..+..+. +.. + +++..|+.. +.-... ..... ..+ . .-.|
T Consensus 39 ~~~vLDlG~G~G~~~~~l~--------~~~-------~--~v~~vD~s~-~~~~~a------~~~~~-~~~-~--~~~~- 89 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLE--------DYG-------F--EVVGVDISE-DMIRKA------REYAK-SRE-S--NVEF- 89 (227)
T ss_dssp CCEEEEETCTTSHHHHHHH--------HTT-------C--EEEEEESCH-HHHHHH------HHHHH-HTT-C--CCEE-
T ss_pred CCeEEEEeccCCHHHHHHH--------HcC-------C--EEEEEECCH-HHHHHH------HHHHH-hcC-C--CceE-
Confidence 6799999999998876652 211 3 788888732 000000 00011 111 1 2234
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
+.+++....+|++++|+++++.++|+... .|...+|+.-
T Consensus 90 --~~~d~~~~~~~~~~~D~v~~~~~~~~~~~---------------------------------------~~~~~~l~~~ 128 (227)
T 1ve3_A 90 --IVGDARKLSFEDKTFDYVIFIDSIVHFEP---------------------------------------LELNQVFKEV 128 (227)
T ss_dssp --EECCTTSCCSCTTCEEEEEEESCGGGCCH---------------------------------------HHHHHHHHHH
T ss_pred --EECchhcCCCCCCcEEEEEEcCchHhCCH---------------------------------------HHHHHHHHHH
Confidence 44777666678899999999988554211 1234457778
Q ss_pred HHHhccCceEEEEeccC
Q 044727 223 SEELKTEGRMVLNFIGN 239 (380)
Q Consensus 223 a~eL~pgG~l~~~~~g~ 239 (380)
.+.|+|||++++..+..
T Consensus 129 ~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 129 RRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp HHHEEEEEEEEEEEECH
T ss_pred HHHcCCCcEEEEEecCh
Confidence 89999999999998753
No 95
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.36 E-value=2.9e-06 Score=78.90 Aligned_cols=108 Identities=13% Similarity=0.000 Sum_probs=72.1
Q ss_pred eEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcceee
Q 044727 64 IRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIA 143 (380)
Q Consensus 64 ~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 143 (380)
.+|+|+|||+|..|..+...+ | |+-.|+.-|... .....+..... +..+-.++.
T Consensus 79 ~~VldlG~G~G~~~~~la~~V-----------G---~~G~V~avD~s~-----------~~~~~l~~~a~-~~~ni~~V~ 132 (233)
T 4df3_A 79 DRILYLGIASGTTASHMSDII-----------G---PRGRIYGVEFAP-----------RVMRDLLTVVR-DRRNIFPIL 132 (233)
T ss_dssp CEEEEETCTTSHHHHHHHHHH-----------C---TTCEEEEEECCH-----------HHHHHHHHHST-TCTTEEEEE
T ss_pred CEEEEecCcCCHHHHHHHHHh-----------C---CCceEEEEeCCH-----------HHHHHHHHhhH-hhcCeeEEE
Confidence 899999999999999884443 1 568899988743 11111222111 111235666
Q ss_pred ccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 044727 144 AAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRS 223 (380)
Q Consensus 144 ~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra 223 (380)
+..+....-.++..++|++++..+.|| |-..++..-.
T Consensus 133 ~d~~~p~~~~~~~~~vDvVf~d~~~~~-------------------------------------------~~~~~l~~~~ 169 (233)
T 4df3_A 133 GDARFPEKYRHLVEGVDGLYADVAQPE-------------------------------------------QAAIVVRNAR 169 (233)
T ss_dssp SCTTCGGGGTTTCCCEEEEEECCCCTT-------------------------------------------HHHHHHHHHH
T ss_pred EeccCccccccccceEEEEEEeccCCh-------------------------------------------hHHHHHHHHH
Confidence 677777677788899999987655444 0112366668
Q ss_pred HHhccCceEEEEeccCC
Q 044727 224 EELKTEGRMVLNFIGND 240 (380)
Q Consensus 224 ~eL~pgG~l~~~~~g~~ 240 (380)
+-|||||+++++.-.+.
T Consensus 170 r~LKpGG~lvI~ik~r~ 186 (233)
T 4df3_A 170 FFLRDGGYMLMAIKARS 186 (233)
T ss_dssp HHEEEEEEEEEEEECCH
T ss_pred HhccCCCEEEEEEeccc
Confidence 89999999999876554
No 96
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.33 E-value=1.7e-06 Score=76.89 Aligned_cols=154 Identities=14% Similarity=0.073 Sum_probs=90.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..++..+.. +..+++..|.... . +........ ..+ . .-.|
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~----------------~~~~v~~vD~s~~-~------~~~a~~~~~-~~~-~--~~~~ 75 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVE----------------DGYKTYGIEISDL-Q------LKKAENFSR-ENN-F--KLNI 75 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHH----------------TTCEEEEEECCHH-H------HHHHHHHHH-HHT-C--CCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHh----------------CCCEEEEEECCHH-H------HHHHHHHHH-hcC-C--ceEE
Confidence 3579999999999987655321 2368888887430 0 000000111 111 1 1233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....+|++++|+++++.++|+++ . .|...+|+.
T Consensus 76 ---~~~d~~~~~~~~~~fD~v~~~~~l~~~~---~------------------------------------~~~~~~l~~ 113 (209)
T 2p8j_A 76 ---SKGDIRKLPFKDESMSFVYSYGTIFHMR---K------------------------------------NDVKEAIDE 113 (209)
T ss_dssp ---EECCTTSCCSCTTCEEEEEECSCGGGSC---H------------------------------------HHHHHHHHH
T ss_pred ---EECchhhCCCCCCceeEEEEcChHHhCC---H------------------------------------HHHHHHHHH
Confidence 3366666667899999999999999852 1 133455777
Q ss_pred HHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHcc-Cccccc---cc-ccccCcccCCHHHHHHHHHhcCceeEe
Q 044727 222 RSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEG-LIEVSK---LE-SFHFPMYNPCVEEVRQVIEREGSFNIH 296 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG-~i~~e~---~d-~f~~P~Y~ps~eE~~~~ie~~GsF~I~ 296 (380)
-++.|+|||++++..+......- ..| .+.+.. .+ .......+.+.+|+...++..| |...
T Consensus 114 ~~~~LkpgG~l~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g-~~~~ 178 (209)
T 2p8j_A 114 IKRVLKPGGLACINFLTTKDERY--------------NKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMK-VLFK 178 (209)
T ss_dssp HHHHEEEEEEEEEEEEETTSTTT--------------TCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSE-EEEE
T ss_pred HHHHcCCCcEEEEEEecccchhc--------------cchhhhccccceeccCCCceeEEecCHHHHHHHHhhcC-ceee
Confidence 78999999999999987652110 000 000100 01 1112225679999999999887 5443
Q ss_pred EEE
Q 044727 297 QLE 299 (380)
Q Consensus 297 ~~e 299 (380)
...
T Consensus 179 ~~~ 181 (209)
T 2p8j_A 179 EDR 181 (209)
T ss_dssp EEE
T ss_pred eee
Confidence 333
No 97
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.33 E-value=6.7e-07 Score=81.91 Aligned_cols=158 Identities=15% Similarity=0.053 Sum_probs=88.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|.++..+.... + +|+..|+.. ......+.... . .+-.|
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~---------------~--~v~gvD~s~-----------~~~~~a~~~~~-~-~~~~~ 105 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFF---------------P--RVIGLDVSK-----------SALEIAAKENT-A-ANISY 105 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHS---------------S--CEEEEESCH-----------HHHHHHHHHSC-C-TTEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhC---------------C--CEEEEECCH-----------HHHHHHHHhCc-c-cCceE
Confidence 35789999999999998874321 2 677777732 11111111111 0 01233
Q ss_pred eeccCCCcccCCCCC-----CccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPP-----CFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~-----~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
+-+++....++. .++|++++..++||+.. . |..
T Consensus 106 ---~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~---~------------------------------------~~~ 143 (245)
T 3ggd_A 106 ---RLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPV---E------------------------------------KRE 143 (245)
T ss_dssp ---EECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCG---G------------------------------------GHH
T ss_pred ---EECcccccccccccccccCccEEEEcchhhcCCH---H------------------------------------HHH
Confidence 235554432222 34899999999999632 1 233
Q ss_pred HHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcc--cccccccccCcccCCHHHHHHHHHhcCcee
Q 044727 217 SFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIE--VSKLESFHFPMYNPCVEEVRQVIEREGSFN 294 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~--~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~ 294 (380)
.+|+.-.+.|+|||++++.-++.... ..+..+... ..|.-. ...+..-..|. ..+.+|+.+.+ .| |+
T Consensus 144 ~~l~~~~~~LkpgG~l~i~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--aG-f~ 212 (245)
T 3ggd_A 144 LLGQSLRILLGKQGAMYLIELGTGCI--DFFNSLLEK-----YGQLPYELLLVMEHGIRPG-IFTAEDIELYF--PD-FE 212 (245)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECTTHH--HHHHHHHHH-----HSSCCHHHHHHHTTTCCCC-CCCHHHHHHHC--TT-EE
T ss_pred HHHHHHHHHcCCCCEEEEEeCCcccc--HHHHHHHhC-----CCCCchhhhhccccCCCCC-ccCHHHHHHHh--CC-CE
Confidence 45777789999999998888765421 111111110 001100 00011112333 36899999999 78 99
Q ss_pred EeEEEEEe
Q 044727 295 IHQLETSH 302 (380)
Q Consensus 295 I~~~e~~~ 302 (380)
+.......
T Consensus 213 ~~~~~~~~ 220 (245)
T 3ggd_A 213 ILSQGEGL 220 (245)
T ss_dssp EEEEECCB
T ss_pred EEeccccc
Confidence 87766543
No 98
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.32 E-value=1.1e-06 Score=81.28 Aligned_cols=65 Identities=22% Similarity=0.227 Sum_probs=41.1
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEE
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQL 298 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~ 298 (380)
|+.-.+.|+|||++++.+ . +.++.. +..+-..|.+... ..+..+.+|+.+.++..| |++..+
T Consensus 120 l~~i~rvLkpgG~lv~~~-~------p~~e~~---~~~~~~~G~~~d~-------~~~~~~~~~l~~~l~~aG-f~v~~~ 181 (232)
T 3opn_A 120 LPPLYEILEKNGEVAALI-K------PQFEAG---REQVGKNGIIRDP-------KVHQMTIEKVLKTATQLG-FSVKGL 181 (232)
T ss_dssp HHHHHHHSCTTCEEEEEE-C------HHHHSC---HHHHC-CCCCCCH-------HHHHHHHHHHHHHHHHHT-EEEEEE
T ss_pred HHHHHHhccCCCEEEEEE-C------cccccC---HHHhCcCCeecCc-------chhHHHHHHHHHHHHHCC-CEEEEE
Confidence 555589999999999965 1 222211 2222233543221 123348899999999999 999887
Q ss_pred EEE
Q 044727 299 ETS 301 (380)
Q Consensus 299 e~~ 301 (380)
+..
T Consensus 182 ~~~ 184 (232)
T 3opn_A 182 TFS 184 (232)
T ss_dssp EEC
T ss_pred EEc
Confidence 754
No 99
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.28 E-value=4.6e-06 Score=75.71 Aligned_cols=106 Identities=15% Similarity=0.189 Sum_probs=65.8
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..+..+.. . .+++..|+.. ......+.........-.|
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~-----------------~-~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~- 83 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLAD-----------------H-YEVTGVDLSE-----------EMLEIAQEKAMETNRHVDF- 83 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTT-----------------T-SEEEEEESCH-----------HHHHHHHHHHHHTTCCCEE-
T ss_pred CCeEEEecCCCCHHHHHHhh-----------------C-CeEEEEECCH-----------HHHHHHHHhhhhcCCceEE-
Confidence 47999999999998876611 1 5677778732 1111111100000002233
Q ss_pred eccCCCcccCCCCCCccceEEccc-ccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSF-CLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~-alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....++ +++|++++.. ++||+... .|...+|+.
T Consensus 84 --~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~--------------------------------------~~~~~~l~~ 122 (243)
T 3d2l_A 84 --WVQDMRELELP-EPVDAITILCDSLNYLQTE--------------------------------------ADVKQTFDS 122 (243)
T ss_dssp --EECCGGGCCCS-SCEEEEEECTTGGGGCCSH--------------------------------------HHHHHHHHH
T ss_pred --EEcChhhcCCC-CCcCEEEEeCCchhhcCCH--------------------------------------HHHHHHHHH
Confidence 34666554555 8999999987 89985321 134455777
Q ss_pred HHHHhccCceEEEEeccC
Q 044727 222 RSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~ 239 (380)
-.+.|+|||++++.+..+
T Consensus 123 ~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 123 AARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp HHHHEEEEEEEEEEEECH
T ss_pred HHHhcCCCeEEEEEcCCH
Confidence 789999999999987643
No 100
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.25 E-value=3.2e-06 Score=74.27 Aligned_cols=139 Identities=12% Similarity=0.086 Sum_probs=85.1
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
+.+|+|+|||+|..+..+... ..+++..|+... . +........ ..+ .++ +
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~~-~------~~~a~~~~~-~~~---~~~--~ 82 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN-----------------GYDVDAWDKNAM-S------IANVERIKS-IEN---LDN--L 82 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT-----------------TCEEEEEESCHH-H------HHHHHHHHH-HHT---CTT--E
T ss_pred CCeEEEEcCCCCHHHHHHHHC-----------------CCeEEEEECCHH-H------HHHHHHHHH-hCC---CCC--c
Confidence 469999999999988776221 257888887320 0 000000011 111 111 2
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
..+.+++....+ ++++|+++++.++||+.. . |+..+|+.-
T Consensus 83 ~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~---~------------------------------------~~~~~l~~~ 122 (199)
T 2xvm_A 83 HTRVVDLNNLTF-DRQYDFILSTVVLMFLEA---K------------------------------------TIPGLIANM 122 (199)
T ss_dssp EEEECCGGGCCC-CCCEEEEEEESCGGGSCG---G------------------------------------GHHHHHHHH
T ss_pred EEEEcchhhCCC-CCCceEEEEcchhhhCCH---H------------------------------------HHHHHHHHH
Confidence 224467766555 889999999999999641 1 223457777
Q ss_pred HHHhccCceEEEEeccCC-CcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEEEE
Q 044727 223 SEELKTEGRMVLNFIGND-KYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQLET 300 (380)
Q Consensus 223 a~eL~pgG~l~~~~~g~~-~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~e~ 300 (380)
.+.|+|||++++...... ... . . ....+..+.+|+++.++. |++...+.
T Consensus 123 ~~~L~~gG~l~~~~~~~~~~~~-----------------~---~------~~~~~~~~~~~l~~~~~~---f~~~~~~~ 172 (199)
T 2xvm_A 123 QRCTKPGGYNLIVAAMDTADYP-----------------C---T------VGFPFAFKEGELRRYYEG---WERVKYNE 172 (199)
T ss_dssp HHTEEEEEEEEEEEEBCCSSSC-----------------C---C------SCCSCCBCTTHHHHHTTT---SEEEEEEC
T ss_pred HHhcCCCeEEEEEEeeccCCcC-----------------C---C------CCCCCccCHHHHHHHhcC---CeEEEecc
Confidence 899999999877654322 111 0 0 112345689999999975 88887753
No 101
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.18 E-value=2.8e-06 Score=77.06 Aligned_cols=111 Identities=16% Similarity=0.139 Sum_probs=67.3
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
.-+|+|+|||+|..++.+... + |..+++..|+.. .+. ...+. ..+ ..+
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~--------~-------p~~~v~giD~s~----------~~l-~~a~~~~~~~~---~~n 89 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQ--------N-------PDINYIGIELFK----------SVI-VTAVQKVKDSE---AQN 89 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHH--------C-------TTSEEEEECSCH----------HHH-HHHHHHHHHSC---CSS
T ss_pred CceEEEEecCCCHHHHHHHHH--------C-------CCCCEEEEEech----------HHH-HHHHHHHHHcC---CCC
Confidence 468999999999999887322 1 568899999843 111 11111 111 122
Q ss_pred ceeeccCCCccc--CCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHG--RLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 140 ~f~~~vpgSFy~--~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
+ .-+.++... ..+|++++|.++..+...|.... .. +..+ ....
T Consensus 90 v--~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~----~~--------~~rl---------------------~~~~ 134 (213)
T 2fca_A 90 V--KLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKR----HE--------KRRL---------------------TYSH 134 (213)
T ss_dssp E--EEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGG----GG--------GGST---------------------TSHH
T ss_pred E--EEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCcc----cc--------cccc---------------------CcHH
Confidence 1 124466544 23789999999987766663220 00 0000 0124
Q ss_pred HHHHHHHHhccCceEEEEec
Q 044727 218 FLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~ 237 (380)
||+.-++.|+|||.+++.+.
T Consensus 135 ~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 135 FLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp HHHHHHHHHTTSCEEEEEES
T ss_pred HHHHHHHHcCCCCEEEEEeC
Confidence 57777899999999999874
No 102
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.15 E-value=9.6e-06 Score=71.72 Aligned_cols=111 Identities=13% Similarity=0.102 Sum_probs=67.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..|..+.+.. +++..+|+..|+.... .++ +-.|
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~-------------~~~~~~v~gvD~s~~~------~~~---------------~v~~ 67 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERT-------------KNYKNKIIGIDKKIMD------PIP---------------NVYF 67 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHT-------------TTSCEEEEEEESSCCC------CCT---------------TCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHc-------------CCCCceEEEEeCCccC------CCC---------------CceE
Confidence 34799999999999998874432 0014788888885410 000 0112
Q ss_pred eeccCCCcccCC-------------------------CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEcc
Q 044727 142 IAAAPGSFHGRL-------------------------FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAK 196 (380)
Q Consensus 142 ~~~vpgSFy~~l-------------------------~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~ 196 (380)
+-+++.... +++.++|+++|..++||... ...+
T Consensus 68 ---~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~---~~~d---------------- 125 (201)
T 2plw_A 68 ---IQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN---KIDD---------------- 125 (201)
T ss_dssp ---EECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSC---HHHH----------------
T ss_pred ---EEccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC---cccC----------------
Confidence 113332222 57889999999999998421 0011
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccC
Q 044727 197 TCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 197 ~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
. + ...+....+|+.-.+-|+|||++++.++..
T Consensus 126 ------~---~--~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 126 ------H---L--NSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp ------H---H--HHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ------H---H--HHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 0 0 001223456777788999999999987654
No 103
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.14 E-value=1.7e-06 Score=79.18 Aligned_cols=138 Identities=13% Similarity=0.095 Sum_probs=78.9
Q ss_pred HHHHHHHHHhhHHHHHHHHhhhcc---C-CCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 35 APSREATLKTKPLLHESLFDLYCN---G-FPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 35 ~~Q~~~~~~~~~~l~~ai~~~~~~---~-~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..|++.+++..|.+.-....-..+ . ....-+|+|+|||+|..++.+... . |...|+..|+.
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f~~~~~~vLDiGcG~G~~~~~lA~~--------~-------p~~~v~giD~s 67 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKD--------R-------PEQDFLGIEVH 67 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHHSSCCCEEEEESCTTCHHHHHHHHH--------C-------TTSEEEEECSC
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHcCCCCCeEEEEeeeChHHHHHHHHH--------C-------CCCeEEEEEec
Confidence 457777777777654210000000 0 013468999999999998877332 1 66889999984
Q ss_pred CCchhhhhccCcchHHHhhh---hcCCCCCCc-ceeeccCCCcccC---CCCCCccceEEcccccccccCCCccccccCC
Q 044727 111 GNDFNTVSKSLPSFYERLKT---ERGHDDFGS-CFIAAAPGSFHGR---LFPPCFLNLVYSSFCLHWLSRMPKELVSECG 183 (380)
Q Consensus 111 ~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~-~f~~~vpgSFy~~---l~p~~svdl~~Ss~alhWls~~P~~~~~~~~ 183 (380)
. ++.. ..+. ..+ ..+ .| +.++..+- .+|++++|.+++.+...|.... ..
T Consensus 68 ~----------~~l~-~a~~~~~~~~---l~nv~~---~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~----~~--- 123 (218)
T 3dxy_A 68 S----------PGVG-ACLASAHEEG---LSNLRV---MCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKAR----HN--- 123 (218)
T ss_dssp H----------HHHH-HHHHHHHHTT---CSSEEE---ECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGG----GG---
T ss_pred H----------HHHH-HHHHHHHHhC---CCcEEE---EECCHHHHHHHHcCCCChheEEEeCCCCccchh----hh---
Confidence 3 1111 1111 112 123 23 45666432 4899999999999888883221 10
Q ss_pred CCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEec
Q 044727 184 IPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 184 ~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~ 237 (380)
+.++ - .+ .||+.-++.|||||.+++.+-
T Consensus 124 -----~rr~-----~-~~---------------~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 124 -----KRRI-----V-QV---------------PFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp -----GGSS-----C-SH---------------HHHHHHHHHEEEEEEEEEEES
T ss_pred -----hhhh-----h-hH---------------HHHHHHHHHcCCCcEEEEEeC
Confidence 0010 0 11 257777899999999999884
No 104
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.13 E-value=1.3e-05 Score=70.98 Aligned_cols=121 Identities=12% Similarity=0.005 Sum_probs=75.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... + + .+++..|+.. ......+.... ....-.+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~------------~---~-~~v~~~D~s~-----------~~~~~a~~~~~-~~~~i~~ 93 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLG------------G---F-PNVTSVDYSS-----------VVVAAMQACYA-HVPQLRW 93 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHT------------T---C-CCEEEEESCH-----------HHHHHHHHHTT-TCTTCEE
T ss_pred CCCeEEEECCCCcHHHHHHHHc------------C---C-CcEEEEeCCH-----------HHHHHHHHhcc-cCCCcEE
Confidence 4579999999999998876321 1 2 2788888732 11111111110 0001233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....++++++|++++..++|.+..... .+|+. .+ ....|...+|+.
T Consensus 94 ---~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~--------~~~~~----------~~--------~~~~~~~~~l~~ 144 (215)
T 2pxx_A 94 ---ETMDVRKLDFPSASFDVVLEKGTLDALLAGER--------DPWTV----------SS--------EGVHTVDQVLSE 144 (215)
T ss_dssp ---EECCTTSCCSCSSCEEEEEEESHHHHHTTTCS--------CTTSC----------CH--------HHHHHHHHHHHH
T ss_pred ---EEcchhcCCCCCCcccEEEECcchhhhccccc--------ccccc----------cc--------chhHHHHHHHHH
Confidence 33566555678899999999999987643211 12221 11 123466778999
Q ss_pred HHHHhccCceEEEEeccC
Q 044727 222 RSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~ 239 (380)
-.+.|+|||++++..++.
T Consensus 145 ~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 145 VSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHEEEEEEEEEEESCC
T ss_pred HHHhCcCCCEEEEEeCCC
Confidence 999999999999999876
No 105
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.06 E-value=1.1e-05 Score=69.56 Aligned_cols=100 Identities=18% Similarity=0.131 Sum_probs=63.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+.... |..+|+..|+.. ......+. ..+ ..
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~---------------~~~~v~~vD~~~-----------~~~~~a~~~~~~~~---~~ 75 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRST---------------PQTTAVCFEISE-----------ERRERILSNAINLG---VS 75 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTS---------------SSEEEEEECSCH-----------HHHHHHHHHHHTTT---CT
T ss_pred CCCeEEEeCCCCCHHHHHHHHHC---------------CCCeEEEEeCCH-----------HHHHHHHHHHHHhC---CC
Confidence 35799999999999888773221 458899999842 11111111 111 12
Q ss_pred -cceeeccCCCcccCCCCC--CccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHH
Q 044727 139 -SCFIAAAPGSFHGRLFPP--CFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDF 215 (380)
Q Consensus 139 -~~f~~~vpgSFy~~l~p~--~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~ 215 (380)
++++. ++..+ .+|. +++|++++..++|| +..
T Consensus 76 ~~~~~~---~d~~~-~~~~~~~~~D~i~~~~~~~~----~~~-------------------------------------- 109 (178)
T 3hm2_A 76 DRIAVQ---QGAPR-AFDDVPDNPDVIFIGGGLTA----PGV-------------------------------------- 109 (178)
T ss_dssp TSEEEE---CCTTG-GGGGCCSCCSEEEECC-TTC----TTH--------------------------------------
T ss_pred CCEEEe---cchHh-hhhccCCCCCEEEECCcccH----HHH--------------------------------------
Confidence 34433 55533 4455 89999999999988 111
Q ss_pred HHHHHHHHHHhccCceEEEEeccC
Q 044727 216 TSFLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
|+.-.+.|+|||++++..+..
T Consensus 110 ---l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 110 ---FAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp ---HHHHHHTCCTTCEEEEEECSH
T ss_pred ---HHHHHHhcCCCCEEEEEeecc
Confidence 445578899999999987643
No 106
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.05 E-value=2.4e-05 Score=71.59 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=70.4
Q ss_pred hhHHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcc
Q 044727 44 TKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPS 123 (380)
Q Consensus 44 ~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~ 123 (380)
...++++.+.... .+.+.+|+|+|||+|..+..+.. . ..+|+..|+.. .+
T Consensus 26 ~~~~~~~~~~~~~---~~~~~~vLDlGcG~G~~~~~l~~--------~---------~~~v~gvD~s~----------~~ 75 (252)
T 1wzn_A 26 EIDFVEEIFKEDA---KREVRRVLDLACGTGIPTLELAE--------R---------GYEVVGLDLHE----------EM 75 (252)
T ss_dssp HHHHHHHHHHHTC---SSCCCEEEEETCTTCHHHHHHHH--------T---------TCEEEEEESCH----------HH
T ss_pred HHHHHHHHHHHhc---ccCCCEEEEeCCCCCHHHHHHHH--------C---------CCeEEEEECCH----------HH
Confidence 3445555544332 13357999999999998887621 1 25788888742 11
Q ss_pred hHHHhhh---hcCCCCCCcceeeccCCCcccCCCCCCccceEEccc-ccccccCCCccccccCCCCCCCCccEEEccCCC
Q 044727 124 FYERLKT---ERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSF-CLHWLSRMPKELVSECGIPLLNKRDVCVAKTCS 199 (380)
Q Consensus 124 ~~~~~~~---~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~-alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~ 199 (380)
+ ...+. ..+ ..-.| +.+++....+ ++++|++++.. .+|+++ .
T Consensus 76 l-~~a~~~~~~~~---~~v~~---~~~d~~~~~~-~~~fD~v~~~~~~~~~~~---~----------------------- 121 (252)
T 1wzn_A 76 L-RVARRKAKERN---LKIEF---LQGDVLEIAF-KNEFDAVTMFFSTIMYFD---E----------------------- 121 (252)
T ss_dssp H-HHHHHHHHHTT---CCCEE---EESCGGGCCC-CSCEEEEEECSSGGGGSC---H-----------------------
T ss_pred H-HHHHHHHHhcC---CceEE---EECChhhccc-CCCccEEEEcCCchhcCC---H-----------------------
Confidence 1 11111 111 12233 4467755444 47899999863 444431 1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEecc
Q 044727 200 PFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 200 ~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g 238 (380)
.|...+|+.-++.|+|||++++.+..
T Consensus 122 -------------~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 122 -------------EDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp -------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------------HHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 13455688888999999999998754
No 107
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.05 E-value=3.6e-06 Score=79.01 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=86.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|.++..+... ..+|+..|+.. ......+. ..+ ..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-----------------g~~v~~vD~s~-----------~~~~~a~~~~~~~~---~~ 168 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-----------------GYDVTSWDHNE-----------NSIAFLNETKEKEN---LN 168 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHHHHHHTT---CC
T ss_pred CCCcEEEECCCCCHHHHHHHHC-----------------CCeEEEEECCH-----------HHHHHHHHHHHHcC---Cc
Confidence 3579999999999988876221 25788888742 11111111 111 11
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +.+++....+ ++++|++++..++||++. . ++..+
T Consensus 169 ~~~---~~~d~~~~~~-~~~fD~i~~~~~~~~~~~---~------------------------------------~~~~~ 205 (286)
T 3m70_A 169 IST---ALYDINAANI-QENYDFIVSTVVFMFLNR---E------------------------------------RVPSI 205 (286)
T ss_dssp EEE---EECCGGGCCC-CSCEEEEEECSSGGGSCG---G------------------------------------GHHHH
T ss_pred eEE---EEeccccccc-cCCccEEEEccchhhCCH---H------------------------------------HHHHH
Confidence 233 4477755444 899999999999999632 1 23345
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEE
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQL 298 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~ 298 (380)
|+.-.+.|+|||.+++......+... .-..+.+..+.+|++..++. |++...
T Consensus 206 l~~~~~~LkpgG~l~i~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~~~~~~---~~~~~~ 257 (286)
T 3m70_A 206 IKNMKEHTNVGGYNLIVAAMSTDDVP-------------------------CPLPFSFTFAENELKEYYKD---WEFLEY 257 (286)
T ss_dssp HHHHHHTEEEEEEEEEEEEBCCSSSC-------------------------CSSCCSCCBCTTHHHHHTTT---SEEEEE
T ss_pred HHHHHHhcCCCcEEEEEEecCCCCCC-------------------------CCCCccccCCHHHHHHHhcC---CEEEEE
Confidence 77778999999998887654321110 01223567788999998854 888776
Q ss_pred E
Q 044727 299 E 299 (380)
Q Consensus 299 e 299 (380)
+
T Consensus 258 ~ 258 (286)
T 3m70_A 258 N 258 (286)
T ss_dssp E
T ss_pred E
Confidence 5
No 108
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.04 E-value=2.3e-05 Score=75.13 Aligned_cols=156 Identities=16% Similarity=0.165 Sum_probs=87.4
Q ss_pred HHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHH
Q 044727 48 LHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYER 127 (380)
Q Consensus 48 l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~ 127 (380)
|++++..+..+ ....+|+|+|||||..|..+++. ..-+|+.-|+-. .++...
T Consensus 73 l~~~l~~~~~~--~~g~~vLDiGcGTG~~t~~L~~~----------------ga~~V~aVDvs~----------~mL~~a 124 (291)
T 3hp7_A 73 LEKALAVFNLS--VEDMITIDIGASTGGFTDVMLQN----------------GAKLVYAVDVGT----------NQLVWK 124 (291)
T ss_dssp HHHHHHHTTCC--CTTCEEEEETCTTSHHHHHHHHT----------------TCSEEEEECSSS----------SCSCHH
T ss_pred HHHHHHhcCCC--ccccEEEecCCCccHHHHHHHhC----------------CCCEEEEEECCH----------HHHHHH
Confidence 34444444321 23479999999999999876221 236899999865 222221
Q ss_pred hhhhcCCCCCCcceeeccCCCc---ccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHH
Q 044727 128 LKTERGHDDFGSCFIAAAPGSF---HGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVH 204 (380)
Q Consensus 128 ~~~~~~~~~~~~~f~~~vpgSF---y~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~ 204 (380)
+++. +.+-.. -...+ -..-+|..++|++++..++||+..+
T Consensus 125 ~r~~------~rv~~~-~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~~v------------------------------ 167 (291)
T 3hp7_A 125 LRQD------DRVRSM-EQYNFRYAEPVDFTEGLPSFASIDVSFISLNLI------------------------------ 167 (291)
T ss_dssp HHTC------TTEEEE-CSCCGGGCCGGGCTTCCCSEEEECCSSSCGGGT------------------------------
T ss_pred HHhC------ccccee-cccCceecchhhCCCCCCCEEEEEeeHhhHHHH------------------------------
Confidence 2110 010000 00111 0012466789999999999986222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHH-HccCcccccccccccCcccCCHHHH
Q 044727 205 KAYLDQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMV-YEGLIEVSKLESFHFPMYNPCVEEV 283 (380)
Q Consensus 205 ~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv-~eG~i~~e~~d~f~~P~Y~ps~eE~ 283 (380)
|..-++.|+|||++++.. .+. |+.- ++-+ ..|.+... -.+..+.+++
T Consensus 168 --------------L~e~~rvLkpGG~lv~lv-kPq------fe~~----~~~~~~~G~vrd~-------~~~~~~~~~v 215 (291)
T 3hp7_A 168 --------------LPALAKILVDGGQVVALV-KPQ------FEAG----REQIGKNGIVRES-------SIHEKVLETV 215 (291)
T ss_dssp --------------HHHHHHHSCTTCEEEEEE-CGG------GTSC----GGGCC-CCCCCCH-------HHHHHHHHHH
T ss_pred --------------HHHHHHHcCcCCEEEEEE-Ccc------cccC----hhhcCCCCccCCH-------HHHHHHHHHH
Confidence 334488999999999963 221 1110 0000 11332221 1233578889
Q ss_pred HHHHHhcCceeEeEEEEE
Q 044727 284 RQVIEREGSFNIHQLETS 301 (380)
Q Consensus 284 ~~~ie~~GsF~I~~~e~~ 301 (380)
...++..| |.+..+...
T Consensus 216 ~~~~~~~G-f~v~~~~~s 232 (291)
T 3hp7_A 216 TAFAVDYG-FSVKGLDFS 232 (291)
T ss_dssp HHHHHHTT-EEEEEEEEC
T ss_pred HHHHHHCC-CEEEEEEEC
Confidence 99999999 998877653
No 109
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.02 E-value=4.7e-05 Score=66.31 Aligned_cols=73 Identities=12% Similarity=-0.007 Sum_probs=49.2
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..++.+. + .- +|+..|+.. .+. .. . . +-.|
T Consensus 24 ~~~vLD~GcG~G~~~~~l~--------~---------~~-~v~gvD~s~----------~~~----~~-~--~--~~~~- 65 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLR--------K---------RN-TVVSTDLNI----------RAL----ES-H--R--GGNL- 65 (170)
T ss_dssp SCEEEEETCTTCHHHHHHT--------T---------TS-EEEEEESCH----------HHH----HT-C--S--SSCE-
T ss_pred CCeEEEeccCccHHHHHHH--------h---------cC-cEEEEECCH----------HHH----hc-c--c--CCeE-
Confidence 4599999999999888771 1 11 888888732 111 00 0 1 1233
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCc
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPK 176 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~ 176 (380)
+-+++.+ .++++++|+++|+..+||.++.+.
T Consensus 66 --~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~ 96 (170)
T 3q87_B 66 --VRADLLC-SINQESVDVVVFNPPYVPDTDDPI 96 (170)
T ss_dssp --EECSTTT-TBCGGGCSEEEECCCCBTTCCCTT
T ss_pred --EECChhh-hcccCCCCEEEECCCCccCCcccc
Confidence 3377755 677799999999999999776543
No 110
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.01 E-value=1.3e-05 Score=68.08 Aligned_cols=111 Identities=15% Similarity=0.179 Sum_probs=71.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... .|..+++..|+.. .- .++ .-.+
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~--------------~~~~~v~~~D~~~--~~----~~~---------------~~~~ 66 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQI--------------GGKGRIIACDLLP--MD----PIV---------------GVDF 66 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH--------------CTTCEEEEEESSC--CC----CCT---------------TEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHh--------------CCCCeEEEEECcc--cc----ccC---------------cEEE
Confidence 34699999999999888774432 1347888888732 11 011 1122
Q ss_pred eeccCCCcccCC--------CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRL--------FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEI 213 (380)
Q Consensus 142 ~~~vpgSFy~~l--------~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~ 213 (380)
+.+++.... ++++++|++++...+||...... + . .....
T Consensus 67 ---~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---~----------------------~-----~~~~~ 113 (180)
T 1ej0_A 67 ---LQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAV---D----------------------I-----PRAMY 113 (180)
T ss_dssp ---EESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH---H----------------------H-----HHHHH
T ss_pred ---EEcccccchhhhhhhccCCCCceeEEEECCCccccCCCcc---c----------------------h-----HHHHH
Confidence 224554433 68899999999999999644211 1 0 00112
Q ss_pred HHHHHHHHHHHHhccCceEEEEeccCC
Q 044727 214 DFTSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 214 D~~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
....+|+.-.+.|+|||.+++..+...
T Consensus 114 ~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 114 LVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 346678888899999999999887554
No 111
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.96 E-value=1.5e-05 Score=70.89 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=76.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+. +. +..+++..|+.. ......+. ..+ ..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~--------~~--------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~---~~ 109 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAH--------KL--------GAKSVLATDISD-----------ESMTAAEENAALNG---IY 109 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESCH-----------HHHHHHHHHHHHTT---CC
T ss_pred CCCEEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECCH-----------HHHHHHHHHHHHcC---CC
Confidence 35799999999998877652 11 335888888842 11111111 111 12
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
+ +..+.+++.. ++++++|++++...+||+. .+
T Consensus 110 ~--v~~~~~d~~~--~~~~~fD~i~~~~~~~~~~--------------------------------------------~~ 141 (205)
T 3grz_A 110 D--IALQKTSLLA--DVDGKFDLIVANILAEILL--------------------------------------------DL 141 (205)
T ss_dssp C--CEEEESSTTT--TCCSCEEEEEEESCHHHHH--------------------------------------------HH
T ss_pred c--eEEEeccccc--cCCCCceEEEECCcHHHHH--------------------------------------------HH
Confidence 1 2224466644 3568999999987776631 22
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEE
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQL 298 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~ 298 (380)
|+.-.+.|+|||+++++.+... +.+++...+++.| |++...
T Consensus 142 l~~~~~~L~~gG~l~~~~~~~~--------------------------------------~~~~~~~~~~~~G-f~~~~~ 182 (205)
T 3grz_A 142 IPQLDSHLNEDGQVIFSGIDYL--------------------------------------QLPKIEQALAENS-FQIDLK 182 (205)
T ss_dssp GGGSGGGEEEEEEEEEEEEEGG--------------------------------------GHHHHHHHHHHTT-EEEEEE
T ss_pred HHHHHHhcCCCCEEEEEecCcc--------------------------------------cHHHHHHHHHHcC-CceEEe
Confidence 4444788999999999765331 3667888888888 887665
Q ss_pred EE
Q 044727 299 ET 300 (380)
Q Consensus 299 e~ 300 (380)
..
T Consensus 183 ~~ 184 (205)
T 3grz_A 183 MR 184 (205)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 112
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.95 E-value=2.3e-05 Score=73.98 Aligned_cols=100 Identities=7% Similarity=-0.084 Sum_probs=62.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..|+.+.. + ..+|+..|+.. .+ ....+.... . . +
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~--------~---------g~~V~gvD~S~----------~m-l~~Ar~~~~-~---~-~ 91 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALE--------R---------GASVTVFDFSQ----------RM-CDDLAEALA-D---R-C 91 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHH--------T---------TCEEEEEESCH----------HH-HHHHHHHTS-S---S-C
T ss_pred CcCEEEEEeCcchHHHHHHHh--------c---------CCEEEEEECCH----------HH-HHHHHHHHH-h---c-c
Confidence 357999999999999987732 1 25788888742 11 121222111 1 1 1
Q ss_pred eeccCCCcccCCC-----CCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLF-----PPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 142 ~~~vpgSFy~~l~-----p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
+.+++..-.. +++++|+++|+.++||+.. . |+.
T Consensus 92 ---v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~--~-------------------------------------~~~ 129 (261)
T 3iv6_A 92 ---VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTT--E-------------------------------------EAR 129 (261)
T ss_dssp ---CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCH--H-------------------------------------HHH
T ss_pred ---ceeeeeecccccccccCCCccEEEEhhhhHhCCH--H-------------------------------------HHH
Confidence 2234422211 2679999999999998531 1 223
Q ss_pred HHHHHHHHHhccCceEEEEec
Q 044727 217 SFLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~ 237 (380)
..|+.-++.| |||++++++.
T Consensus 130 ~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 130 RACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp HHHHHHHHHH-TTSEEEEEEE
T ss_pred HHHHHHHHhC-cCcEEEEEec
Confidence 3366667788 9999999986
No 113
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.93 E-value=9.7e-05 Score=63.97 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=66.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ..+++..|+-.. .-.. ...... ..+ ..+--
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-----------------~~~v~~~D~~~~-~~~~------a~~~~~-~~~---~~~~~ 103 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-----------------VKSTTMADINRR-AIKL------AKENIK-LNN---LDNYD 103 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-----------------SSEEEEEESCHH-HHHH------HHHHHH-HTT---CTTSC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-----------------CCeEEEEECCHH-HHHH------HHHHHH-HcC---CCccc
Confidence 3579999999999988766211 257888887320 0000 000011 111 11100
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+..+.+++.. .++++++|++++...+||- ..++..+|+.
T Consensus 104 ~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~----------------------------------------~~~~~~~l~~ 142 (194)
T 1dus_A 104 IRVVHSDLYE-NVKDRKYNKIITNPPIRAG----------------------------------------KEVLHRIIEE 142 (194)
T ss_dssp EEEEECSTTT-TCTTSCEEEEEECCCSTTC----------------------------------------HHHHHHHHHH
T ss_pred eEEEECchhc-ccccCCceEEEECCCcccc----------------------------------------hhHHHHHHHH
Confidence 1124467655 5678899999998777760 0134456777
Q ss_pred HHHHhccCceEEEEeccC
Q 044727 222 RSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~ 239 (380)
-.+.|+|||++++.....
T Consensus 143 ~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 143 GKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHHEEEEEEEEEEEEST
T ss_pred HHHHcCCCCEEEEEECCC
Confidence 899999999999998765
No 114
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.93 E-value=3.2e-05 Score=76.73 Aligned_cols=107 Identities=9% Similarity=-0.012 Sum_probs=72.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+... ..+|+..|.-. ......+. .++ ..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-----------------g~~V~gvDis~-----------~al~~A~~n~~~~~---~~ 281 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-----------------GAEVVGVEDDL-----------ASVLSLQKGLEANA---LK 281 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-----------------TCEEEEEESBH-----------HHHHHHHHHHHHTT---CC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-----------------CCEEEEEECCH-----------HHHHHHHHHHHHcC---CC
Confidence 3579999999999999887321 25888888732 11111111 111 12
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
..| +.+++...+.+++++|+|+|...+||...... .+...|
T Consensus 282 v~~---~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~------------------------------------~~~~~~ 322 (381)
T 3dmg_A 282 AQA---LHSDVDEALTEEARFDIIVTNPPFHVGGAVIL------------------------------------DVAQAF 322 (381)
T ss_dssp CEE---EECSTTTTSCTTCCEEEEEECCCCCTTCSSCC------------------------------------HHHHHH
T ss_pred eEE---EEcchhhccccCCCeEEEEECCchhhcccccH------------------------------------HHHHHH
Confidence 233 44788777777799999999999998433221 244567
Q ss_pred HHHHHHHhccCceEEEEecc
Q 044727 219 LKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g 238 (380)
|+.-.+.|+|||++++....
T Consensus 323 l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 323 VNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp HHHHHHHEEEEEEEEEEECT
T ss_pred HHHHHHhcCcCcEEEEEEcC
Confidence 88889999999999998643
No 115
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.88 E-value=2.1e-05 Score=72.12 Aligned_cols=70 Identities=17% Similarity=0.213 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeE
Q 044727 216 TSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNI 295 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I 295 (380)
..+|+.-++.|||||++++.+..... ++.+...+. +. ....|.|++ .+|+...++..| |+|
T Consensus 119 ~~~l~~~~r~LkpGG~l~i~~~~~~~-----~~~~~~~~~-----~~-------~~~~~~~~~-~~el~~~l~~aG-f~v 179 (225)
T 3p2e_A 119 RDILSNVADLAKKEAHFEFVTTYSDS-----YEEAEIKKR-----GL-------PLLSKAYFL-SEQYKAELSNSG-FRI 179 (225)
T ss_dssp HHHHHHHHTTEEEEEEEEEEECCCC-------------------------------CCHHHHH-SHHHHHHHHHHT-CEE
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccc-----chhchhhhc-----CC-------CCCChhhcc-hHHHHHHHHHcC-CCe
Confidence 34577789999999999995432221 111100001 10 011233333 247999999999 999
Q ss_pred eEEEEEeec
Q 044727 296 HQLETSHIS 304 (380)
Q Consensus 296 ~~~e~~~~~ 304 (380)
..++.+..+
T Consensus 180 ~~~~~~~~~ 188 (225)
T 3p2e_A 180 DDVKELDNE 188 (225)
T ss_dssp EEEEEECHH
T ss_pred eeeeecCHH
Confidence 999988644
No 116
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.88 E-value=1.9e-05 Score=72.14 Aligned_cols=109 Identities=12% Similarity=0.099 Sum_probs=65.5
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+. +. .+ -+|+..|+.. ......+........+-.|
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~--------~~-------~~-~~v~gvD~s~-----------~~l~~a~~~~~~~~~~v~~ 112 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECND-----------GVFQRLRDWAPRQTHKVIP 112 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHH--------TS-------CE-EEEEEEECCH-----------HHHHHHHHHGGGCSSEEEE
T ss_pred CCCeEEEEeccCCHHHHHHH--------hc-------CC-CeEEEEcCCH-----------HHHHHHHHHHHhcCCCeEE
Confidence 35899999999999887661 11 12 4788888743 1111111111001111123
Q ss_pred eeccCCCcccC--CCCCCccceEEc-ccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGR--LFPPCFLNLVYS-SFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 142 ~~~vpgSFy~~--l~p~~svdl~~S-s~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
+-|++.+. .+|++++|++++ .+++++ ..... .++..+
T Consensus 113 ---~~~d~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~~------------------------------------~~~~~~ 152 (236)
T 1zx0_A 113 ---LKGLWEDVAPTLPDGHFDGILYDTYPLSE-ETWHT------------------------------------HQFNFI 152 (236)
T ss_dssp ---EESCHHHHGGGSCTTCEEEEEECCCCCBG-GGTTT------------------------------------HHHHHH
T ss_pred ---EecCHHHhhcccCCCceEEEEECCcccch-hhhhh------------------------------------hhHHHH
Confidence 44777655 688999999999 666522 11110 134456
Q ss_pred HHHHHHHhccCceEEEEec
Q 044727 219 LKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~ 237 (380)
|+.-++.|||||+|++..+
T Consensus 153 l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 153 KNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp HHTHHHHEEEEEEEEECCH
T ss_pred HHHHHHhcCCCeEEEEEec
Confidence 7778999999999987654
No 117
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.85 E-value=6.1e-05 Score=68.28 Aligned_cols=69 Identities=14% Similarity=0.060 Sum_probs=41.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... ..+|+..|+.. ......+.. . . +-.|
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~-~-~--~~~~ 95 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ-----------------AARWAAYDFSP-----------ELLKLARAN-A-P--HADV 95 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG-----------------SSEEEEEESCH-----------HHHHHHHHH-C-T--TSEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-----------------CCEEEEEECCH-----------HHHHHHHHh-C-C--CceE
Confidence 4579999999999988776211 25788888742 111111111 1 1 2234
Q ss_pred eeccCCCcc-cCCCC-CCccceEEcc
Q 044727 142 IAAAPGSFH-GRLFP-PCFLNLVYSS 165 (380)
Q Consensus 142 ~~~vpgSFy-~~l~p-~~svdl~~Ss 165 (380)
+.+++. ...++ ++++|+++|+
T Consensus 96 ---~~~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 96 ---YEWNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp ---EECCSCSSCCTTCCCCEEEEEEE
T ss_pred ---EEcchhhccCCcCCCCEEEEEeC
Confidence 336663 33466 8899999987
No 118
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.82 E-value=5.3e-05 Score=66.49 Aligned_cols=119 Identities=15% Similarity=0.207 Sum_probs=68.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..++.+.... .. .......+..+|+..|+... ..++ ...+
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~----~~--~~~~~~~~~~~v~~vD~s~~------~~~~---------------~~~~ 74 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKV----NA--AGTDPSSPVGFVLGVDLLHI------FPLE---------------GATF 74 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHT----TT--TCCCTTSCCCEEEEECSSCC------CCCT---------------TCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh----cc--ccccccCCCceEEEEechhc------ccCC---------------CCeE
Confidence 35799999999999988774332 00 00000112378999998541 0010 1112
Q ss_pred eeccCCCcccC--------CCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGR--------LFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEI 213 (380)
Q Consensus 142 ~~~vpgSFy~~--------l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~ 213 (380)
+ ..+++... .++++++|+++|..++||.-.. ..+ + .....
T Consensus 75 ~--~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~---~~~--------------------~-------~~~~~ 122 (196)
T 2nyu_A 75 L--CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFR---DLD--------------------H-------DRLIS 122 (196)
T ss_dssp E--CSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCH---HHH--------------------H-------HHHHH
T ss_pred E--EeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCc---ccC--------------------H-------HHHHH
Confidence 1 03444322 2567799999998777663210 011 0 00112
Q ss_pred HHHHHHHHHHHHhccCceEEEEeccC
Q 044727 214 DFTSFLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 214 D~~~FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
....+|+.-.+.|+|||++++..+..
T Consensus 123 ~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 123 LCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 33466777899999999999997754
No 119
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.82 E-value=2.6e-05 Score=76.18 Aligned_cols=106 Identities=11% Similarity=0.097 Sum_probs=67.5
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..++.+.+. +..+|+..|+. +.-...+.. . ..++.. ..-.|
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~----------------g~~~v~gvD~s--~~l~~a~~~------~-~~~~~~-~~v~~- 119 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA----------------GARKVIGIECS--SISDYAVKI------V-KANKLD-HVVTI- 119 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT----------------TCSEEEEEECS--THHHHHHHH------H-HHTTCT-TTEEE-
T ss_pred CCEEEEEeccchHHHHHHHHC----------------CCCEEEEECcH--HHHHHHHHH------H-HHcCCC-CcEEE-
Confidence 479999999999988776221 23689999984 221111110 1 111100 01234
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
+-|++.+-.+|.+++|+++|....+++...+ ++..+|..+
T Consensus 120 --~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~--------------------------------------~~~~~l~~~ 159 (349)
T 3q7e_A 120 --IKGKVEEVELPVEKVDIIISEWMGYCLFYES--------------------------------------MLNTVLHAR 159 (349)
T ss_dssp --EESCTTTCCCSSSCEEEEEECCCBBTBTBTC--------------------------------------CHHHHHHHH
T ss_pred --EECcHHHccCCCCceEEEEEccccccccCch--------------------------------------hHHHHHHHH
Confidence 4478877778999999999987666543321 233458889
Q ss_pred HHHhccCceEEEE
Q 044727 223 SEELKTEGRMVLN 235 (380)
Q Consensus 223 a~eL~pgG~l~~~ 235 (380)
.+.|+|||+++..
T Consensus 160 ~r~LkpgG~li~~ 172 (349)
T 3q7e_A 160 DKWLAPDGLIFPD 172 (349)
T ss_dssp HHHEEEEEEEESC
T ss_pred HHhCCCCCEEccc
Confidence 9999999999843
No 120
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.82 E-value=7.2e-05 Score=69.26 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=63.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... |..+++..|... ......+. .+ . .-.|
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~v~~vD~s~-----------~~~~~a~~-~~-~--~~~~ 134 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL---------------PEITTFGLDVSK-----------VAIKAAAK-RY-P--QVTF 134 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC---------------TTSEEEEEESCH-----------HHHHHHHH-HC-T--TSEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC---------------CCCeEEEEeCCH-----------HHHHHHHH-hC-C--CcEE
Confidence 35799999999999998773321 346788888742 11111111 11 1 1234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.+++....++++++|++++..+ |.. |+.
T Consensus 135 ---~~~d~~~~~~~~~~fD~v~~~~~-------~~~-----------------------------------------l~~ 163 (269)
T 1p91_A 135 ---CVASSHRLPFSDTSMDAIIRIYA-------PCK-----------------------------------------AEE 163 (269)
T ss_dssp ---EECCTTSCSBCTTCEEEEEEESC-------CCC-----------------------------------------HHH
T ss_pred ---EEcchhhCCCCCCceeEEEEeCC-------hhh-----------------------------------------HHH
Confidence 33666566688899999998543 211 334
Q ss_pred HHHHhccCceEEEEeccCC
Q 044727 222 RSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g~~ 240 (380)
-.+.|+|||++++..++.+
T Consensus 164 ~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 164 LARVVKPGGWVITATPGPR 182 (269)
T ss_dssp HHHHEEEEEEEEEEEECTT
T ss_pred HHHhcCCCcEEEEEEcCHH
Confidence 4788999999999998765
No 121
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.78 E-value=6.4e-05 Score=65.52 Aligned_cols=111 Identities=11% Similarity=0.077 Sum_probs=61.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..|+.+... ..+|+..|+.. ......+. ..+ ..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~-----------------~~~v~~vD~s~-----------~~l~~a~~~~~~~~---~~ 70 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL-----------------SKKVYAFDVQE-----------QALGKTSQRLSDLG---IE 70 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT-----------------SSEEEEEESCH-----------HHHHHHHHHHHHHT---CC
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-----------------CCEEEEEECCH-----------HHHHHHHHHHHHcC---CC
Confidence 3579999999999999887211 26788888742 11111111 112 12
Q ss_pred c-ceeeccCCCcccCC-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 139 S-CFIAAAPGSFHGRL-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 139 ~-~f~~~vpgSFy~~l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
+ .|+. +++..-. ++++++|++++. ++|+......+.. .+ .+..
T Consensus 71 ~v~~~~---~~~~~l~~~~~~~fD~v~~~--~~~~~~~~~~~~~-------------------~~-----------~~~~ 115 (185)
T 3mti_A 71 NTELIL---DGHENLDHYVREPIRAAIFN--LGYLPSADKSVIT-------------------KP-----------HTTL 115 (185)
T ss_dssp CEEEEE---SCGGGGGGTCCSCEEEEEEE--EC------------------------------CH-----------HHHH
T ss_pred cEEEEe---CcHHHHHhhccCCcCEEEEe--CCCCCCcchhccc-------------------Ch-----------hhHH
Confidence 2 3332 5553311 458899999765 3553321111110 11 2334
Q ss_pred HHHHHHHHHhccCceEEEEecc
Q 044727 217 SFLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g 238 (380)
.+|+.-.+.|+|||++++....
T Consensus 116 ~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 116 EAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC-
T ss_pred HHHHHHHHhcCCCcEEEEEEeC
Confidence 4577778999999999998763
No 122
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.77 E-value=2.3e-05 Score=77.57 Aligned_cols=111 Identities=12% Similarity=0.027 Sum_probs=66.5
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
..+|+|+|||+|..++.+... + |..+|+..|.-. ......+. .++.. ..
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~--------~-------p~~~V~gvD~s~-----------~al~~Ar~n~~~ngl~--~~ 274 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDK--------N-------PQAKVVFVDESP-----------MAVASSRLNVETNMPE--AL 274 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHH--------C-------TTCEEEEEESCH-----------HHHHHHHHHHHHHCGG--GG
T ss_pred CCeEEEEeCcchHHHHHHHHH--------C-------CCCEEEEEECcH-----------HHHHHHHHHHHHcCCC--cC
Confidence 379999999999999887332 1 568899999832 11111111 11100 01
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
.-+..+.++++. .+|++++|+|++.-.+|+...++.. ....||
T Consensus 275 ~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~------------------------------------~~~~~l 317 (375)
T 4dcm_A 275 DRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDN------------------------------------VAWEMF 317 (375)
T ss_dssp GGEEEEECSTTT-TCCTTCEEEEEECCCC-------CC------------------------------------HHHHHH
T ss_pred ceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHH------------------------------------HHHHHH
Confidence 111224477765 5788999999999888874443222 112457
Q ss_pred HHHHHHhccCceEEEEecc
Q 044727 220 KFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g 238 (380)
+.-.+.|+|||++++....
T Consensus 318 ~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 318 HHARRCLKINGELYIVANR 336 (375)
T ss_dssp HHHHHHEEEEEEEEEEEET
T ss_pred HHHHHhCCCCcEEEEEEEC
Confidence 7778899999999997643
No 123
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.74 E-value=5.9e-05 Score=74.47 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=67.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
+..+|+|+|||+|..++.+.. . ..-+|+..|+. +.-...+.. . ..++.. ..-.|
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~--------~--------g~~~V~gvD~s--~~~~~a~~~------~-~~~~~~-~~v~~ 116 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQ--------A--------GARKVYAVEAT--KMADHARAL------V-KANNLD-HIVEV 116 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHH--------T--------TCSEEEEEESS--TTHHHHHHH------H-HHTTCT-TTEEE
T ss_pred CCCEEEEeccCcCHHHHHHHh--------c--------CCCEEEEEccH--HHHHHHHHH------H-HHcCCC-CeEEE
Confidence 457999999999988877622 1 11489999984 322222211 1 111100 01234
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.|+..+-.+| +++|+++|....|++...+ ++..+|+.
T Consensus 117 ---~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~--------------------------------------~~~~~l~~ 154 (376)
T 3r0q_C 117 ---IEGSVEDISLP-EKVDVIISEWMGYFLLRES--------------------------------------MFDSVISA 154 (376)
T ss_dssp ---EESCGGGCCCS-SCEEEEEECCCBTTBTTTC--------------------------------------THHHHHHH
T ss_pred ---EECchhhcCcC-CcceEEEEcChhhcccchH--------------------------------------HHHHHHHH
Confidence 44777665666 9999999977666654221 23456888
Q ss_pred HHHHhccCceEEEEec
Q 044727 222 RSEELKTEGRMVLNFI 237 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~ 237 (380)
+.+-|+|||+|++...
T Consensus 155 ~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 155 RDRWLKPTGVMYPSHA 170 (376)
T ss_dssp HHHHEEEEEEEESSEE
T ss_pred HHhhCCCCeEEEEecC
Confidence 9999999999986543
No 124
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.73 E-value=8.1e-05 Score=68.67 Aligned_cols=120 Identities=13% Similarity=0.089 Sum_probs=63.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCc-c
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGS-C 140 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 140 (380)
+..+|+|+|||+|..++.+... + |...|+..|+-. +.-...+. ....+..... ....+ .
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~--------~-------p~~~v~GiDis~-~~l~~A~~---~~~~l~~~~~-~~~~nv~ 105 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPL--------F-------PDTLILGLEIRV-KVSDYVQD---RIRALRAAPA-GGFQNIA 105 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGG--------S-------TTSEEEEEESCH-HHHHHHHH---HHHHHHHSTT-CCCTTEE
T ss_pred CCCeEEEEccCCcHHHHHHHHH--------C-------CCCeEEEEECCH-HHHHHHHH---HHHHHHHHHh-cCCCeEE
Confidence 4579999999999998877221 1 567899999742 00000000 0000000000 01122 3
Q ss_pred eeeccCCCccc---CCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHG---RLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 141 f~~~vpgSFy~---~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
| +-++... ..||++++|.++..+.-.|..+. . .|.++ ....
T Consensus 106 ~---~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~----h--------~krr~---------------------~~~~ 149 (235)
T 3ckk_A 106 C---LRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRT----K--------HKWRI---------------------ISPT 149 (235)
T ss_dssp E---EECCTTTCHHHHCCTTCEEEEEEESCC-----------------------C---------------------CCHH
T ss_pred E---EECcHHHhhhhhCCCcCeeEEEEeCCCchhhhh----h--------hhhhh---------------------hhHH
Confidence 3 3355543 23789999999876665552210 0 00000 0124
Q ss_pred HHHHHHHHhccCceEEEEec
Q 044727 218 FLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~ 237 (380)
||+.-++.|+|||.+++.+.
T Consensus 150 ~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 150 LLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp HHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHCCCCCEEEEEeC
Confidence 57777999999999999874
No 125
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.72 E-value=9.3e-05 Score=67.78 Aligned_cols=99 Identities=12% Similarity=0.047 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhh---hhcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLK---TERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~---~~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+... . |..+|+..|... .....++ ...+ ..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~--------~-------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~---~~ 120 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKIC--------F-------PHLHVTIVDSLN-----------KRITFLEKLSEALQ---LE 120 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHH--------C-------TTCEEEEEESCH-----------HHHHHHHHHHHHHT---CS
T ss_pred CCCEEEEecCCCCHHHHHHHHh--------C-------CCCEEEEEeCCH-----------HHHHHHHHHHHHcC---CC
Confidence 3579999999999999887321 1 457899999732 1111111 1112 11
Q ss_pred cceeeccCCCcccCCCC---CCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFP---PCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDF 215 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p---~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~ 215 (380)
+ +..+.|++.+-.++ ++++|+++|.. + . |+
T Consensus 121 ~--v~~~~~d~~~~~~~~~~~~~fD~V~~~~-------~----~----------------------------------~~ 153 (240)
T 1xdz_A 121 N--TTFCHDRAETFGQRKDVRESYDIVTARA-------V----A----------------------------------RL 153 (240)
T ss_dssp S--EEEEESCHHHHTTCTTTTTCEEEEEEEC-------C----S----------------------------------CH
T ss_pred C--EEEEeccHHHhcccccccCCccEEEEec-------c----C----------------------------------CH
Confidence 2 22244677554443 68999999843 0 1 23
Q ss_pred HHHHHHHHHHhccCceEEEEe
Q 044727 216 TSFLKFRSEELKTEGRMVLNF 236 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~ 236 (380)
..+|+.-.+.|+|||++++..
T Consensus 154 ~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 154 SVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp HHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEe
Confidence 345777789999999998863
No 126
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.71 E-value=1.4e-05 Score=77.78 Aligned_cols=106 Identities=12% Similarity=0.096 Sum_probs=69.4
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
..+|+|+|||+|..++.+... + |..+|+..|... ......+. .++ ...
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~--------~-------~~~~v~~vD~s~-----------~~l~~a~~~~~~~~---~~~ 247 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARH--------S-------PKIRLTLCDVSA-----------PAVEASRATLAANG---VEG 247 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHH--------C-------TTCBCEEEESBH-----------HHHHHHHHHHHHTT---CCC
T ss_pred CCeEEEecCccCHHHHHHHHH--------C-------CCCEEEEEECCH-----------HHHHHHHHHHHHhC---CCC
Confidence 358999999999999877322 1 557888888742 11111111 111 112
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
.+ +.+++.. ++++++|+++++..+||.-.. ...+...||
T Consensus 248 ~~---~~~d~~~--~~~~~fD~Iv~~~~~~~g~~~------------------------------------~~~~~~~~l 286 (343)
T 2pjd_A 248 EV---FASNVFS--EVKGRFDMIISNPPFHDGMQT------------------------------------SLDAAQTLI 286 (343)
T ss_dssp EE---EECSTTT--TCCSCEEEEEECCCCCSSSHH------------------------------------HHHHHHHHH
T ss_pred EE---EEccccc--cccCCeeEEEECCCcccCccC------------------------------------CHHHHHHHH
Confidence 23 4467655 347899999999999972210 013566778
Q ss_pred HHHHHHhccCceEEEEecc
Q 044727 220 KFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g 238 (380)
+.-.+.|+|||.+++....
T Consensus 287 ~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 287 RGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp HHHGGGEEEEEEEEEEEET
T ss_pred HHHHHhCCCCcEEEEEEcC
Confidence 8999999999999997653
No 127
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.71 E-value=7.5e-05 Score=67.62 Aligned_cols=33 Identities=15% Similarity=0.007 Sum_probs=25.0
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..|..+...+ +..+|+..|+.
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~---------------~~~~V~gvD~s 90 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIV---------------DEGIIYAVEYS 90 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHT---------------TTSEEEEECCC
T ss_pred CCEEEEECCcCCHHHHHHHHHc---------------CCCEEEEEECC
Confidence 4799999999999888773322 23688998974
No 128
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.69 E-value=1.8e-05 Score=70.39 Aligned_cols=102 Identities=15% Similarity=0.067 Sum_probs=63.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+... . |..+|+..|... ......+. ..+ ..
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~--------~-------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~---~~ 90 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNL--------M-------PNGRIFALERNP-----------QYLGFIRDNLKKFV---AR 90 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHH--------C-------TTSEEEEEECCH-----------HHHHHHHHHHHHHT---CT
T ss_pred CCCEEEEECCCCCHHHHHHHHH--------C-------CCCEEEEEeCCH-----------HHHHHHHHHHHHhC---CC
Confidence 3579999999999998877322 1 457899999732 11111111 111 01
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
+ +..+.+++.+.+.+..++|++++..+++ +...+
T Consensus 91 ~--v~~~~~d~~~~~~~~~~~D~i~~~~~~~--------------------------------------------~~~~~ 124 (204)
T 3e05_A 91 N--VTLVEAFAPEGLDDLPDPDRVFIGGSGG--------------------------------------------MLEEI 124 (204)
T ss_dssp T--EEEEECCTTTTCTTSCCCSEEEESCCTT--------------------------------------------CHHHH
T ss_pred c--EEEEeCChhhhhhcCCCCCEEEECCCCc--------------------------------------------CHHHH
Confidence 1 1123466655555557789988776553 11234
Q ss_pred HHHHHHHhccCceEEEEecc
Q 044727 219 LKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g 238 (380)
|+.-.+.|+|||++++....
T Consensus 125 l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 125 IDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp HHHHHHHCCTTCEEEEEECB
T ss_pred HHHHHHhcCCCeEEEEEecc
Confidence 66778899999999998753
No 129
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.68 E-value=8.6e-05 Score=65.20 Aligned_cols=107 Identities=11% Similarity=-0.002 Sum_probs=64.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+++ . +..+|+..|+-. .....++. ..+ . ..
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~--------~--------~~~~v~~vD~~~-----------~~~~~a~~~~~~~~-~-~~ 94 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALS--------R--------GAASVLFVESDQ-----------RSAAVIARNIEALG-L-SG 94 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T--------TCSEEEEEECCH-----------HHHHHHHHHHHHHT-C-SC
T ss_pred CCCEEEEeCCCcCHHHHHHHH--------C--------CCCeEEEEECCH-----------HHHHHHHHHHHHcC-C-Cc
Confidence 357999999999999886522 1 235788888732 11111111 111 0 01
Q ss_pred cceeeccCCCcccCC--CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRL--FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l--~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
-.| +-+++.+-+ ++++++|++++...+||.. .++.
T Consensus 95 v~~---~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~----------------------------------------~~~~ 131 (189)
T 3p9n_A 95 ATL---RRGAVAAVVAAGTTSPVDLVLADPPYNVDS----------------------------------------ADVD 131 (189)
T ss_dssp EEE---EESCHHHHHHHCCSSCCSEEEECCCTTSCH----------------------------------------HHHH
T ss_pred eEE---EEccHHHHHhhccCCCccEEEECCCCCcch----------------------------------------hhHH
Confidence 234 336664433 4688999999876666521 1233
Q ss_pred HHHHHHHH--HhccCceEEEEeccCC
Q 044727 217 SFLKFRSE--ELKTEGRMVLNFIGND 240 (380)
Q Consensus 217 ~FL~~Ra~--eL~pgG~l~~~~~g~~ 240 (380)
.+|+.-.+ .|+|||++++....+.
T Consensus 132 ~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 132 AILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred HHHHHHHhcCccCCCeEEEEEecCCC
Confidence 34555555 8999999999987654
No 130
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.65 E-value=0.00019 Score=65.19 Aligned_cols=34 Identities=9% Similarity=-0.016 Sum_probs=25.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..++.+...+ +..+|+..|..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~---------------~~~~v~gvD~s 107 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIA---------------DKGIVYAIEYA 107 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHT---------------TTSEEEEEESC
T ss_pred CCCEEEEEcccCCHHHHHHHHHc---------------CCcEEEEEECC
Confidence 35799999999999988874332 24688888874
No 131
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.63 E-value=3e-05 Score=69.03 Aligned_cols=76 Identities=8% Similarity=-0.003 Sum_probs=49.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..+..+... ..+|+..|... ......+. ..+ ..
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~-----------------~~~v~~vD~~~-----------~~~~~a~~~~~~~~---~~ 125 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL-----------------VQHVCSVERIK-----------GLQWQARRRLKNLD---LH 125 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-----------------SSEEEEEESCH-----------HHHHHHHHHHHHTT---CC
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-----------------CCEEEEEecCH-----------HHHHHHHHHHHHcC---CC
Confidence 3579999999999998876322 15777888732 11111111 111 12
Q ss_pred c-ceeeccCCCcccCCCCCCccceEEcccccccc
Q 044727 139 S-CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWL 171 (380)
Q Consensus 139 ~-~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWl 171 (380)
+ .| +-++....+.+.+++|++++..++||+
T Consensus 126 ~v~~---~~~d~~~~~~~~~~~D~i~~~~~~~~~ 156 (210)
T 3lbf_A 126 NVST---RHGDGWQGWQARAPFDAIIVTAAPPEI 156 (210)
T ss_dssp SEEE---EESCGGGCCGGGCCEEEEEESSBCSSC
T ss_pred ceEE---EECCcccCCccCCCccEEEEccchhhh
Confidence 2 23 447777777778899999999998874
No 132
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.63 E-value=6.3e-05 Score=66.68 Aligned_cols=98 Identities=17% Similarity=0.136 Sum_probs=61.2
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
..+|+|+|||+|..++.+.... |..+++..|... ......+. ..+ ..+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~---------------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~---~~~ 116 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR---------------PEAHFTLLDSLG-----------KRVRFLRQVQHELK---LEN 116 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC---------------TTSEEEEEESCH-----------HHHHHHHHHHHHTT---CSS
T ss_pred CCeEEEECCCCCHHHHHHHHHC---------------CCCEEEEEeCCH-----------HHHHHHHHHHHHcC---CCC
Confidence 4699999999999998873321 457899999742 11111111 111 122
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
+..+.+++.. +.|++++|++++.. + . ++..+|
T Consensus 117 --v~~~~~d~~~-~~~~~~~D~i~~~~-~----------~----------------------------------~~~~~l 148 (207)
T 1jsx_A 117 --IEPVQSRVEE-FPSEPPFDGVISRA-F----------A----------------------------------SLNDMV 148 (207)
T ss_dssp --EEEEECCTTT-SCCCSCEEEEECSC-S----------S----------------------------------SHHHHH
T ss_pred --eEEEecchhh-CCccCCcCEEEEec-c----------C----------------------------------CHHHHH
Confidence 2224577744 34678999999732 0 0 123457
Q ss_pred HHHHHHhccCceEEEEec
Q 044727 220 KFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~ 237 (380)
+.-.+.|+|||++++...
T Consensus 149 ~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 149 SWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp HHHTTSEEEEEEEEEEES
T ss_pred HHHHHhcCCCcEEEEEeC
Confidence 777899999999999753
No 133
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.60 E-value=0.00014 Score=70.71 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=62.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
+..+|+|+|||+|..++.+. +. +..+|+..|.. ..-...+ ...+ .++.. ..-.+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~gvD~s--~~~~~a~------~~~~-~~~~~-~~i~~ 117 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAA--------KA--------GAKKVLGVDQS--EILYQAM------DIIR-LNKLE-DTITL 117 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESS--THHHHHH------HHHH-HTTCT-TTEEE
T ss_pred CCCEEEEeeccCcHHHHHHH--------Hc--------CCCEEEEEChH--HHHHHHH------HHHH-HcCCC-CcEEE
Confidence 35799999999998877662 11 22588999973 2211111 1111 11100 01233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+.|++.+..+|++++|+++|....+-+... .++..+|..
T Consensus 118 ---~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~--------------------------------------~~~~~~l~~ 156 (340)
T 2fyt_A 118 ---IKGKIEEVHLPVEKVDVIISEWMGYFLLFE--------------------------------------SMLDSVLYA 156 (340)
T ss_dssp ---EESCTTTSCCSCSCEEEEEECCCBTTBTTT--------------------------------------CHHHHHHHH
T ss_pred ---EEeeHHHhcCCCCcEEEEEEcCchhhccCH--------------------------------------HHHHHHHHH
Confidence 447776667888999999986521111110 134456888
Q ss_pred HHHHhccCceEE
Q 044727 222 RSEELKTEGRMV 233 (380)
Q Consensus 222 Ra~eL~pgG~l~ 233 (380)
+.+.|+|||+++
T Consensus 157 ~~~~LkpgG~li 168 (340)
T 2fyt_A 157 KNKYLAKGGSVY 168 (340)
T ss_dssp HHHHEEEEEEEE
T ss_pred HHhhcCCCcEEE
Confidence 999999999998
No 134
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.60 E-value=0.00017 Score=71.50 Aligned_cols=137 Identities=14% Similarity=0.190 Sum_probs=71.8
Q ss_pred chHHHhcHHHHHHHHHhh-HHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEe
Q 044727 28 NSYANNSAPSREATLKTK-PLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFL 106 (380)
Q Consensus 28 ~sY~~nS~~Q~~~~~~~~-~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~ 106 (380)
.||+..+..+..+-+... .--++||..-... -+--+|+|+|||+|..|+..+ +. | + -+|+.
T Consensus 50 ~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~--~~~k~VLDvG~GtGiLs~~Aa--------~a----G---A-~~V~a 111 (376)
T 4hc4_A 50 ECYSDVSVHEEMIADRVRTDAYRLGILRNWAA--LRGKTVLDVGAGTGILSIFCA--------QA----G---A-RRVYA 111 (376)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHH--HTTCEEEEETCTTSHHHHHHH--------HT----T---C-SEEEE
T ss_pred hhccCcHHHHHHhCCHHHHHHHHHHHHhCHHh--cCCCEEEEeCCCccHHHHHHH--------Hh----C---C-CEEEE
Confidence 478877766554443321 2223444311100 123589999999998776551 11 1 2 57888
Q ss_pred cCCCCCchhhhhccCcchHHHhhhhcCCCCCCcceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCC
Q 044727 107 NDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPL 186 (380)
Q Consensus 107 nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~ 186 (380)
.|.. +.-...+ .....+|.. ..-.+ +.|+..+ +-.+..+|+++|- |+... +..
T Consensus 112 ve~s--~~~~~a~-------~~~~~n~~~-~~i~~---i~~~~~~-~~lpe~~DvivsE----~~~~~---l~~------ 164 (376)
T 4hc4_A 112 VEAS--AIWQQAR-------EVVRFNGLE-DRVHV---LPGPVET-VELPEQVDAIVSE----WMGYG---LLH------ 164 (376)
T ss_dssp EECS--TTHHHHH-------HHHHHTTCT-TTEEE---EESCTTT-CCCSSCEEEEECC----CCBTT---BTT------
T ss_pred EeCh--HHHHHHH-------HHHHHcCCC-ceEEE---Eeeeeee-ecCCccccEEEee----ccccc---ccc------
Confidence 8852 2111111 111222211 01123 4566644 4444789999994 33221 111
Q ss_pred CCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEE
Q 044727 187 LNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEELKTEGRMVL 234 (380)
Q Consensus 187 ~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~eL~pgG~l~~ 234 (380)
+..+..+|.+|.+-|+|||+++-
T Consensus 165 -------------------------e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 165 -------------------------ESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp -------------------------TCSHHHHHHHHHHHEEEEEEEES
T ss_pred -------------------------cchhhhHHHHHHhhCCCCceECC
Confidence 01234559999999999999873
No 135
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.57 E-value=0.00013 Score=72.93 Aligned_cols=121 Identities=11% Similarity=0.062 Sum_probs=77.5
Q ss_pred CCceEEEeecCC------CCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCC
Q 044727 61 PDCIRFTDMGCS------SGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGH 134 (380)
Q Consensus 61 ~~~~~IaD~GCs------~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~ 134 (380)
.++.+|||+||| +|..|+.++... + |..+|+..|+..+- .+ ..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~-------f-------P~a~V~GVDiSp~m---~~-------------~~- 263 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSF-------F-------PRGQIYGLDIMDKS---HV-------------DE- 263 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHH-------C-------TTCEEEEEESSCCG---GG-------------CB-
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHh-------C-------CCCEEEEEECCHHH---hh-------------cC-
Confidence 356899999999 888888774332 1 45899999995431 10 00
Q ss_pred CCCCcceeeccCCCcccCCCC------CCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHH
Q 044727 135 DDFGSCFIAAAPGSFHGRLFP------PCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYL 208 (380)
Q Consensus 135 ~~~~~~f~~~vpgSFy~~l~p------~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~ 208 (380)
. +-.|+. |+..+..|+ ++++|+|+|..+ ||..
T Consensus 264 ~--rI~fv~---GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~------------------------------------ 301 (419)
T 3sso_A 264 L--RIRTIQ---GDQNDAEFLDRIARRYGPFDIVIDDGS-HINA------------------------------------ 301 (419)
T ss_dssp T--TEEEEE---CCTTCHHHHHHHHHHHCCEEEEEECSC-CCHH------------------------------------
T ss_pred C--CcEEEE---ecccccchhhhhhcccCCccEEEECCc-ccch------------------------------------
Confidence 1 223433 777665566 789999998754 5521
Q ss_pred HHHHHHHHHHHHHHHHHhccCceEEEEeccCC-------Cc----ch-hHHHHHHHHHHHHHH
Q 044727 209 DQFEIDFTSFLKFRSEELKTEGRMVLNFIGND-------KY----HT-GVFELMGMVLNDMVY 259 (380)
Q Consensus 209 ~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~-------~~----~~-~~~~~l~~al~~mv~ 259 (380)
|+..+|+.-.+.|||||++++.-+-.. .. .. .+.+.++..+..+-.
T Consensus 302 -----d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~ 359 (419)
T 3sso_A 302 -----HVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQH 359 (419)
T ss_dssp -----HHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTG
T ss_pred -----hHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcc
Confidence 223347777899999999999744311 11 11 677777777776643
No 136
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.57 E-value=0.00013 Score=69.31 Aligned_cols=49 Identities=10% Similarity=0.226 Sum_probs=35.1
Q ss_pred CCcccCCCC-CCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044727 147 GSFHGRLFP-PCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFRSEE 225 (380)
Q Consensus 147 gSFy~~l~p-~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~Ra~e 225 (380)
++..+..+| .+++|+|+|.+.|+|+.. + +....|+.-++.
T Consensus 201 ~dl~~~~~~~~~~fDlI~crnvliyf~~--~-------------------------------------~~~~vl~~~~~~ 241 (274)
T 1af7_A 201 VNLLEKQYNVPGPFDAIFCRNVMIYFDK--T-------------------------------------TQEDILRRFVPL 241 (274)
T ss_dssp CCTTCSSCCCCCCEEEEEECSSGGGSCH--H-------------------------------------HHHHHHHHHGGG
T ss_pred cccCCCCCCcCCCeeEEEECCchHhCCH--H-------------------------------------HHHHHHHHHHHH
Confidence 455453355 578999999999999643 1 112336677999
Q ss_pred hccCceEEE
Q 044727 226 LKTEGRMVL 234 (380)
Q Consensus 226 L~pgG~l~~ 234 (380)
|+|||.|++
T Consensus 242 L~pgG~L~l 250 (274)
T 1af7_A 242 LKPDGLLFA 250 (274)
T ss_dssp EEEEEEEEE
T ss_pred hCCCcEEEE
Confidence 999999987
No 137
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.56 E-value=1.4e-05 Score=72.37 Aligned_cols=98 Identities=11% Similarity=0.061 Sum_probs=59.1
Q ss_pred HHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchH
Q 044727 46 PLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFY 125 (380)
Q Consensus 46 ~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~ 125 (380)
|.+++--.....- .+.+.+|+|+|||+|+.++.++.. .|..++...|.-. .+..
T Consensus 34 p~ld~fY~~~~~~-l~~~~~VLDlGCG~GplAl~l~~~---------------~p~a~~~A~Di~~----------~~le 87 (200)
T 3fzg_A 34 ATLNDFYTYVFGN-IKHVSSILDFGCGFNPLALYQWNE---------------NEKIIYHAYDIDR----------AEIA 87 (200)
T ss_dssp GGHHHHHHHHHHH-SCCCSEEEEETCTTHHHHHHHHCS---------------SCCCEEEEECSCH----------HHHH
T ss_pred HhHHHHHHHHHhh-cCCCCeEEEecCCCCHHHHHHHhc---------------CCCCEEEEEeCCH----------HHHH
Confidence 6665543332111 245789999999999999988222 2678999999843 1110
Q ss_pred --HHhhhhcCCCCCC-cceeeccCCCcccCCCCCCccceEEcccccccccCCCcc
Q 044727 126 --ERLKTERGHDDFG-SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKE 177 (380)
Q Consensus 126 --~~~~~~~~~~~~~-~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~ 177 (380)
.......| . . ++-+ .+.-.. .|+.++|++.++..||-|.+.+..
T Consensus 88 iar~~~~~~g-~--~~~v~~----~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~a 134 (200)
T 3fzg_A 88 FLSSIIGKLK-T--TIKYRF----LNKESD-VYKGTYDVVFLLKMLPVLKQQDVN 134 (200)
T ss_dssp HHHHHHHHSC-C--SSEEEE----ECCHHH-HTTSEEEEEEEETCHHHHHHTTCC
T ss_pred HHHHHHHhcC-C--CccEEE----eccccc-CCCCCcChhhHhhHHHhhhhhHHH
Confidence 10111122 1 2 2222 344333 688999999999999998554443
No 138
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.55 E-value=0.00014 Score=63.93 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=67.4
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..++.+...+ .|..+|+..|+-.. . +........ ..+.. .+-.|
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~--------------~~~~~v~~vD~s~~-~------~~~a~~~~~-~~~~~-~~v~~- 78 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLV--------------GENGRVFGFDIQDK-A------IANTTKKLT-DLNLI-DRVTL- 78 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHH--------------CTTCEEEEECSCHH-H------HHHHHHHHH-HTTCG-GGEEE-
T ss_pred CCEEEEcCCCCCHHHHHHHHHh--------------CCCCEEEEEECCHH-H------HHHHHHHHH-HcCCC-CCeEE-
Confidence 4799999999999888774432 13468999998420 0 000000011 11100 01123
Q ss_pred eccCCCcccCC-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRL-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 143 ~~vpgSFy~~l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
+-+++..-. ++++++|++++...+ +|..-. .+. . .+ +|...+|+.
T Consensus 79 --~~~d~~~~~~~~~~~fD~v~~~~~~-----~~~~~~-----------~~~---~--~~-----------~~~~~~l~~ 124 (197)
T 3eey_A 79 --IKDGHQNMDKYIDCPVKAVMFNLGY-----LPSGDH-----------SIS---T--RP-----------ETTIQALSK 124 (197)
T ss_dssp --ECSCGGGGGGTCCSCEEEEEEEESB-----CTTSCT-----------TCB---C--CH-----------HHHHHHHHH
T ss_pred --EECCHHHHhhhccCCceEEEEcCCc-----ccCccc-----------ccc---c--Cc-----------ccHHHHHHH
Confidence 447764443 677999999987655 232100 000 0 11 144457888
Q ss_pred HHHHhccCceEEEEecc
Q 044727 222 RSEELKTEGRMVLNFIG 238 (380)
Q Consensus 222 Ra~eL~pgG~l~~~~~g 238 (380)
-.+.|+|||++++..+.
T Consensus 125 ~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 125 AMELLVTGGIITVVIYY 141 (197)
T ss_dssp HHHHEEEEEEEEEEECC
T ss_pred HHHhCcCCCEEEEEEcc
Confidence 89999999999998753
No 139
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.55 E-value=1.5e-05 Score=73.97 Aligned_cols=61 Identities=11% Similarity=-0.022 Sum_probs=40.9
Q ss_pred hHHHhcHHHHHHHHHhhHHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecC
Q 044727 29 SYANNSAPSREATLKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLND 108 (380)
Q Consensus 29 sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nD 108 (380)
.|......|.+....++..|+ .+. .....+|+|+|||+|..|..+...+ .|.-+|+..|
T Consensus 50 ~yr~w~~~~skla~~ll~~l~----~~~---l~~g~~VLDlG~GtG~~t~~la~~v--------------~~~G~V~avD 108 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLK----TNP---IRKGTKVLYLGAASGTTISHVSDII--------------ELNGKAYGVE 108 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCS----CCS---CCTTCEEEEETCTTSHHHHHHHHHH--------------TTTSEEEEEE
T ss_pred chhhhchHHHHHHHHHHhhhh----hcC---CCCCCEEEEEeecCCHHHHHHHHHh--------------CCCCEEEEEE
Confidence 487778888877755543322 111 1224899999999999888874433 1457899999
Q ss_pred CC
Q 044727 109 LP 110 (380)
Q Consensus 109 Lp 110 (380)
+.
T Consensus 109 ~s 110 (232)
T 3id6_C 109 FS 110 (232)
T ss_dssp CC
T ss_pred Cc
Confidence 74
No 140
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.52 E-value=0.00039 Score=63.92 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=26.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..++.+...+ .. +..+|+..|+-
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~------~~-------~~~~v~gvDis 86 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLH------RR-------SLRQVIASDVD 86 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHT------GG-------GEEEEEEEESC
T ss_pred CCCeEEECCCCCCHHHHHHHHHh------cc-------CCCeEEEEECC
Confidence 46899999999998877764332 01 35789999984
No 141
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.52 E-value=0.00021 Score=66.71 Aligned_cols=125 Identities=14% Similarity=0.087 Sum_probs=66.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCC---CCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGH---DDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~---~~~~ 138 (380)
...+|+|+|||+|..++.+.... |..+|+..|+-. ......+..... ..+.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~---------------~~~~v~gvDi~~-----------~~~~~a~~n~~~~~~~~l~ 89 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARL---------------EKAEVTLYERSQ-----------EMAEFARRSLELPDNAAFS 89 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHC---------------TTEEEEEEESSH-----------HHHHHHHHHTTSGGGTTTG
T ss_pred CCCEEEEeCChHhHHHHHHHHhC---------------CCCeEEEEECCH-----------HHHHHHHHHHHhhhhCCCc
Confidence 35799999999999988774321 457888888832 111111111000 0001
Q ss_pred cceeeccCCCcccC-------CCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHH-
Q 044727 139 SCFIAAAPGSFHGR-------LFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQ- 210 (380)
Q Consensus 139 ~~f~~~vpgSFy~~-------l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q- 210 (380)
. -+.-+-+++.+- .++++++|+|++.--.++.... . .+...++.+..
T Consensus 90 ~-~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~----~--------------------~~~~~~~~a~~~ 144 (260)
T 2ozv_A 90 A-RIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDR----R--------------------TPDALKAEAHAM 144 (260)
T ss_dssp G-GEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC-------------------------------------------
T ss_pred c-eEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCC----C--------------------CcCHHHHHHhhc
Confidence 0 011134666543 3678999999997444442100 0 01111111111
Q ss_pred HHHHHHHHHHHHHHHhccCceEEEEec
Q 044727 211 FEIDFTSFLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 211 ~~~D~~~FL~~Ra~eL~pgG~l~~~~~ 237 (380)
...++..||+.-.+-|+|||++++...
T Consensus 145 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 145 TEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp --CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 123477889999999999999999764
No 142
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.51 E-value=3.8e-05 Score=67.85 Aligned_cols=130 Identities=13% Similarity=0.009 Sum_probs=64.6
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
....+|+|+|||+|..++.+.... |..+++..|+-.. .. ...+.... . ...
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~---------------~~~~v~~vD~~~~----------~~-~~a~~~~~-~--~~~ 79 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC---------------PGVSVTAVDLSMD----------AL-AVARRNAE-R--FGA 79 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC---------------TTEEEEEEECC------------------------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC---------------CCCeEEEEECCHH----------HH-HHHHHHHH-H--hCC
Confidence 346899999999999888774321 4578999998431 10 00100000 0 000
Q ss_pred eeeccCCCcccCCCCC-----CccceEEcccccccccCCCc---cccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPP-----CFLNLVYSSFCLHWLSRMPK---ELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFE 212 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~-----~svdl~~Ss~alhWls~~P~---~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~ 212 (380)
-+.-+.+++.. .+++ +++|++++.-..++...... .+... ....-.... ....
T Consensus 80 ~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~------~~~~~~~~~------------~~~~ 140 (215)
T 4dzr_A 80 VVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDY------EPRLALDGG------------EDGL 140 (215)
T ss_dssp ---CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------------------------CTT
T ss_pred ceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhcc------CccccccCC------------CcHH
Confidence 11224466655 5665 99999999766655443321 11100 000000000 0011
Q ss_pred HHHHHHHHHHHHHhccCceEEEEecc
Q 044727 213 IDFTSFLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 213 ~D~~~FL~~Ra~eL~pgG~l~~~~~g 238 (380)
..+..||+.-.+.|+|||++++...+
T Consensus 141 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 141 QFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 23467888889999999994444443
No 143
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.50 E-value=9.9e-05 Score=68.64 Aligned_cols=121 Identities=19% Similarity=0.207 Sum_probs=74.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+ .+. + + +|+..|+.. ......+. .++ ..
T Consensus 120 ~~~~VLDiGcG~G~l~~~l--------a~~----g---~--~v~gvDi~~-----------~~v~~a~~n~~~~~---~~ 168 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAA--------EKL----G---G--KALGVDIDP-----------MVLPQAEANAKRNG---VR 168 (254)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHT----T---C--EEEEEESCG-----------GGHHHHHHHHHHTT---CC
T ss_pred CCCEEEEecCCCcHHHHHH--------HHh----C---C--eEEEEECCH-----------HHHHHHHHHHHHcC---Cc
Confidence 3579999999999987765 221 1 2 888888742 11111111 111 11
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
+..+.+++.. .+|++++|+++++...|++ ..+
T Consensus 169 ---v~~~~~d~~~-~~~~~~fD~Vv~n~~~~~~--------------------------------------------~~~ 200 (254)
T 2nxc_A 169 ---PRFLEGSLEA-ALPFGPFDLLVANLYAELH--------------------------------------------AAL 200 (254)
T ss_dssp ---CEEEESCHHH-HGGGCCEEEEEEECCHHHH--------------------------------------------HHH
T ss_pred ---EEEEECChhh-cCcCCCCCEEEECCcHHHH--------------------------------------------HHH
Confidence 2223466644 3577899999986543331 233
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccccCcccCCHHHHHHHHHhcCceeEeEE
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFHFPMYNPCVEEVRQVIEREGSFNIHQL 298 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~Y~ps~eE~~~~ie~~GsF~I~~~ 298 (380)
+..-.+.|+|||+++++..... +.+++.+.+++.| |++...
T Consensus 201 l~~~~~~LkpgG~lils~~~~~--------------------------------------~~~~v~~~l~~~G-f~~~~~ 241 (254)
T 2nxc_A 201 APRYREALVPGGRALLTGILKD--------------------------------------RAPLVREAMAGAG-FRPLEE 241 (254)
T ss_dssp HHHHHHHEEEEEEEEEEEEEGG--------------------------------------GHHHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHcCCCCEEEEEeeccC--------------------------------------CHHHHHHHHHHCC-CEEEEE
Confidence 5556888999999999754221 2568888888888 887665
Q ss_pred EE
Q 044727 299 ET 300 (380)
Q Consensus 299 e~ 300 (380)
..
T Consensus 242 ~~ 243 (254)
T 2nxc_A 242 AA 243 (254)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 144
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.49 E-value=7.7e-05 Score=74.92 Aligned_cols=112 Identities=16% Similarity=0.186 Sum_probs=63.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcc-hHHHhhhhcCCCCCCcc
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPS-FYERLKTERGHDDFGSC 140 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~~~~~~~~~~~ 140 (380)
...+|+|+|||+|..++.+... . +.-+|+.-|+.. +.-.+.+.... +.... ...|....+--
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~--------~-------g~~kVvGIDiS~-~~lelAr~n~e~frkr~-~~~Gl~~~rVe 235 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAA--------T-------NCKHHYGVEKAD-IPAKYAETMDREFRKWM-KWYGKKHAEYT 235 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH--------C-------CCSEEEEEECCH-HHHHHHHHHHHHHHHHH-HHHTBCCCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHH--------C-------CCCEEEEEeCCH-HHHHHHHHHHHHHHHHH-HHhCCCCCCeE
Confidence 3479999999999999877321 1 324588888842 11111111000 00000 01110000123
Q ss_pred eeeccCCCcccCCCCC--CccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPP--CFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~--~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
| +-|+|.+..++. .++|++++.+.++| |.. ..-
T Consensus 236 f---i~GD~~~lp~~d~~~~aDVVf~Nn~~F~----pdl--------------------------------------~~a 270 (438)
T 3uwp_A 236 L---ERGDFLSEEWRERIANTSVIFVNNFAFG----PEV--------------------------------------DHQ 270 (438)
T ss_dssp E---EECCTTSHHHHHHHHTCSEEEECCTTCC----HHH--------------------------------------HHH
T ss_pred E---EECcccCCccccccCCccEEEEcccccC----chH--------------------------------------HHH
Confidence 4 458988766654 57999998777654 221 111
Q ss_pred HHHHHHHhccCceEEEE
Q 044727 219 LKFRSEELKTEGRMVLN 235 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~ 235 (380)
|....+.|||||++++.
T Consensus 271 L~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 271 LKERFANMKEGGRIVSS 287 (438)
T ss_dssp HHHHHTTSCTTCEEEES
T ss_pred HHHHHHcCCCCcEEEEe
Confidence 56667899999999987
No 145
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.48 E-value=0.00022 Score=66.69 Aligned_cols=124 Identities=14% Similarity=0.069 Sum_probs=72.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+.... |..+|+..|... ......+. ..+ ..
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~---------------~~~~v~~vD~s~-----------~~l~~a~~n~~~~~---~~ 159 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASER---------------PDCEIIAVDRMP-----------DAVSLAQRNAQHLA---IK 159 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHC---------------TTSEEEEECSSH-----------HHHHHHHHHHHHHT---CC
T ss_pred CCCEEEEecCCccHHHHHHHHhC---------------CCCEEEEEECCH-----------HHHHHHHHHHHHcC---CC
Confidence 35799999999999888773321 457899999742 11111111 112 11
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCcc---ccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKE---LVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDF 215 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~---~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~ 215 (380)
+ +..+.+++.. .+|++++|+++|.-..+|... +.. +.......++..| ...-.++
T Consensus 160 ~--v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~~------------------~~g~~~~ 217 (276)
T 2b3t_A 160 N--IHILQSDWFS-ALAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVAA------------------DSGMADI 217 (276)
T ss_dssp S--EEEECCSTTG-GGTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBCH------------------HHHTHHH
T ss_pred c--eEEEEcchhh-hcccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcCC------------------CcHHHHH
Confidence 1 2224577755 456789999999877777554 111 1100000011000 0112456
Q ss_pred HHHHHHHHHHhccCceEEEEe
Q 044727 216 TSFLKFRSEELKTEGRMVLNF 236 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~ 236 (380)
..+++.-.+.|+|||++++..
T Consensus 218 ~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 218 VHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp HHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCEEEEEE
Confidence 778888899999999999974
No 146
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.48 E-value=6.5e-05 Score=68.51 Aligned_cols=76 Identities=18% Similarity=0.189 Sum_probs=45.2
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
..+|+|+|||+|..+..+.... + .+|+..|... ......+. ..+ ..+
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~---------------~-~~v~~vD~~~-----------~~~~~a~~~~~~~~---~~~ 141 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIV---------------K-TDVYTIERIP-----------ELVEFAKRNLERAG---VKN 141 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHH---------------C-SCEEEEESCH-----------HHHHHHHHHHHHTT---CCS
T ss_pred CCEEEEEeCCcCHHHHHHHHHh---------------C-CEEEEEeCCH-----------HHHHHHHHHHHHcC---CCC
Confidence 4699999999999998774332 3 5778888632 11111111 111 122
Q ss_pred ceeeccCCCcccCCCCCCc-cceEEcccccccc
Q 044727 140 CFIAAAPGSFHGRLFPPCF-LNLVYSSFCLHWL 171 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~s-vdl~~Ss~alhWl 171 (380)
+.-+.+++ ...+|+.+ +|++++..+++++
T Consensus 142 --v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~ 171 (235)
T 1jg1_A 142 --VHVILGDG-SKGFPPKAPYDVIIVTAGAPKI 171 (235)
T ss_dssp --EEEEESCG-GGCCGGGCCEEEEEECSBBSSC
T ss_pred --cEEEECCc-ccCCCCCCCccEEEECCcHHHH
Confidence 12244666 44455554 9999999888763
No 147
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.48 E-value=0.00012 Score=67.35 Aligned_cols=22 Identities=18% Similarity=0.176 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhccCceEEEE
Q 044727 214 DFTSFLKFRSEELKTEGRMVLN 235 (380)
Q Consensus 214 D~~~FL~~Ra~eL~pgG~l~~~ 235 (380)
|...||+.-++.|||||+|++.
T Consensus 148 ~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 148 QFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHHHHTHHHHEEEEEEEEEC
T ss_pred chhhhhhhhhheeCCCCEEEEE
Confidence 5556677789999999998764
No 148
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.48 E-value=0.00012 Score=65.39 Aligned_cols=83 Identities=12% Similarity=0.047 Sum_probs=47.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+.... + |..+|+..|... +.-... ..... ..+.. .-.|
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~-----------~---~~~~v~~vD~~~-~~~~~a------~~~~~-~~~~~--~v~~ 132 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIV-----------G---EDGLVVSIERIP-ELAEKA------ERTLR-KLGYD--NVIV 132 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEEESCH-HHHHHH------HHHHH-HHTCT--TEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHh-----------C---CCCEEEEEeCCH-HHHHHH------HHHHH-HcCCC--CeEE
Confidence 34799999999999998774332 1 346888888732 000000 00010 11101 1123
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccc
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWL 171 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWl 171 (380)
+.+++...+.+.+++|++++..++|++
T Consensus 133 ---~~~d~~~~~~~~~~fD~v~~~~~~~~~ 159 (215)
T 2yxe_A 133 ---IVGDGTLGYEPLAPYDRIYTTAAGPKI 159 (215)
T ss_dssp ---EESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred ---EECCcccCCCCCCCeeEEEECCchHHH
Confidence 346664433337899999999999874
No 149
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.46 E-value=0.0002 Score=64.64 Aligned_cols=78 Identities=9% Similarity=-0.112 Sum_probs=46.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..+..+... - .+|+..|... ......+....... .-.+
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~----------------~-~~v~~vD~~~-----------~~~~~a~~~~~~~~-~v~~ 120 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEI----------------V-DKVVSVEINE-----------KMYNYASKLLSYYN-NIKL 120 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH----------------S-SEEEEEESCH-----------HHHHHHHHHHTTCS-SEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHH----------------c-CEEEEEeCCH-----------HHHHHHHHHHhhcC-CeEE
Confidence 3479999999999998877322 1 4677777632 11111111110000 1123
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccc
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWL 171 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWl 171 (380)
+.+++...+.+++++|++++..++|++
T Consensus 121 ---~~~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 121 ---ILGDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp ---EESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred ---EECCcccccccCCCccEEEECCcHHHH
Confidence 346765544457899999999998874
No 150
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.42 E-value=0.00085 Score=72.57 Aligned_cols=114 Identities=10% Similarity=0.018 Sum_probs=71.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhh-cC-CCCCC-
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTE-RG-HDDFG- 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~-~~-~~~~~- 138 (380)
...+|+|+|||+|..++.+... .+|..+|+.-|+.. .. +..-...+... +. ....+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~--------------g~p~a~VtGVDIS~---em----Le~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDY--------------PTSLQTIIGVDISP---KG----LARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSS--------------CCCCCEEEEEESCH---HH----HHHHHHHHHHHTTTTCSSCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHh--------------CCCCCeEEEEECCH---HH----HHHHHHHhhhccchhhcCCCc
Confidence 4579999999999998877211 11346899999843 00 00000001100 00 00111
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-.| +-|++....++.+++|+|++..++||+.+ . +...|
T Consensus 780 Vef---iqGDa~dLp~~d~sFDlVV~~eVLeHL~d---p------------------------------------~l~~~ 817 (950)
T 3htx_A 780 ATL---YDGSILEFDSRLHDVDIGTCLEVIEHMEE---D------------------------------------QACEF 817 (950)
T ss_dssp EEE---EESCTTSCCTTSCSCCEEEEESCGGGSCH---H------------------------------------HHHHH
T ss_pred eEE---EECchHhCCcccCCeeEEEEeCchhhCCh---H------------------------------------HHHHH
Confidence 234 45888888888999999999999999543 1 12235
Q ss_pred HHHHHHHhccCceEEEEeccC
Q 044727 219 LKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~ 239 (380)
|+.-.+.|+|| .++++++..
T Consensus 818 L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 818 GEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp HHHHHHTTCCS-EEEEEECBG
T ss_pred HHHHHHHcCCC-EEEEEecCc
Confidence 67778999999 888888654
No 151
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.41 E-value=0.00013 Score=70.59 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=63.0
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..++.+. +. +..+|+..|+. ..-...+ .... .++.. ..-.+
T Consensus 39 ~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~~vD~s--~~~~~a~------~~~~-~~~~~-~~i~~- 91 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAA--------KH--------GAKHVIGVDMS--SIIEMAK------ELVE-LNGFS-DKITL- 91 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT--------CCSEEEEEESS--THHHHHH------HHHH-HTTCT-TTEEE-
T ss_pred CCEEEEecCccHHHHHHHH--------HC--------CCCEEEEEChH--HHHHHHH------HHHH-HcCCC-CCEEE-
Confidence 4699999999999877652 11 22589999983 2211111 1111 11100 01123
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
+.|++.+-.+|.+++|+++|....+.+... .++..+|..+
T Consensus 92 --~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~--------------------------------------~~~~~~l~~~ 131 (328)
T 1g6q_1 92 --LRGKLEDVHLPFPKVDIIISEWMGYFLLYE--------------------------------------SMMDTVLYAR 131 (328)
T ss_dssp --EESCTTTSCCSSSCEEEEEECCCBTTBSTT--------------------------------------CCHHHHHHHH
T ss_pred --EECchhhccCCCCcccEEEEeCchhhcccH--------------------------------------HHHHHHHHHH
Confidence 447776666788999999997543332211 0233458888
Q ss_pred HHHhccCceEEE
Q 044727 223 SEELKTEGRMVL 234 (380)
Q Consensus 223 a~eL~pgG~l~~ 234 (380)
.+.|+|||+++.
T Consensus 132 ~~~LkpgG~li~ 143 (328)
T 1g6q_1 132 DHYLVEGGLIFP 143 (328)
T ss_dssp HHHEEEEEEEES
T ss_pred HhhcCCCeEEEE
Confidence 999999999973
No 152
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.41 E-value=0.00015 Score=67.16 Aligned_cols=124 Identities=8% Similarity=-0.015 Sum_probs=65.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+... .+ .+|+..|+-. ......+. .++.. ..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~---------------~~-~~v~gvDi~~-----------~~~~~a~~n~~~~~~~-~~ 100 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTR---------------TK-AKIVGVEIQE-----------RLADMAKRSVAYNQLE-DQ 100 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTT---------------CC-CEEEEECCSH-----------HHHHHHHHHHHHTTCT-TT
T ss_pred CCCEEEEcCCchhHHHHHHHHh---------------cC-CcEEEEECCH-----------HHHHHHHHHHHHCCCc-cc
Confidence 3579999999999988876221 13 3889999832 11111111 11100 01
Q ss_pred cceeeccCCCcccCC--CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRL--FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l--~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
-.+ +-+++.+-. ++++++|++++.-..+..... .+.. +......-......++.
T Consensus 101 v~~---~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~--~~~~-------------------~~~~~~~a~~~~~~~~~ 156 (259)
T 3lpm_A 101 IEI---IEYDLKKITDLIPKERADIVTCNPPYFATPDT--SLKN-------------------TNEHFRIARHEVMCTLE 156 (259)
T ss_dssp EEE---ECSCGGGGGGTSCTTCEEEEEECCCC--------------------------------------------HHHH
T ss_pred EEE---EECcHHHhhhhhccCCccEEEECCCCCCCccc--cCCC-------------------CchHHHhhhccccCCHH
Confidence 123 446665443 678999999986443332100 0000 00000000111235778
Q ss_pred HHHHHHHHHhccCceEEEEec
Q 044727 217 SFLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~ 237 (380)
.||+.-.+-|+|||++++...
T Consensus 157 ~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 157 DTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHccCCcEEEEEEc
Confidence 899999999999999999653
No 153
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.40 E-value=0.00057 Score=62.62 Aligned_cols=76 Identities=16% Similarity=0.115 Sum_probs=45.5
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..++.+...+ .|..+++..|+.. ++-...+ .... ..+ ..+ .
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~--------------~~~~~v~~~D~~~-~~~~~a~------~~~~-~~~---~~~-~ 146 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIV--------------GPEGRVVSYEIRE-DFAKLAW------ENIK-WAG---FDD-R 146 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEECSCH-HHHHHHH------HHHH-HHT---CTT-T
T ss_pred CCCEEEEecCCchHHHHHHHHHh--------------CCCeEEEEEecCH-HHHHHHH------HHHH-HcC---CCC-c
Confidence 35799999999999998885443 1457899999842 1111111 0010 111 011 1
Q ss_pred eeccCCCcccCCCCCCccceEEc
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYS 164 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~S 164 (380)
+..+.+++. ..+|++++|++++
T Consensus 147 v~~~~~d~~-~~~~~~~~D~v~~ 168 (255)
T 3mb5_A 147 VTIKLKDIY-EGIEEENVDHVIL 168 (255)
T ss_dssp EEEECSCGG-GCCCCCSEEEEEE
T ss_pred eEEEECchh-hccCCCCcCEEEE
Confidence 222557886 4589999999997
No 154
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.39 E-value=0.00029 Score=67.89 Aligned_cols=165 Identities=11% Similarity=0.010 Sum_probs=63.1
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhh---hhcCCC-CCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLK---TERGHD-DFG 138 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~---~~~~~~-~~~ 138 (380)
..+|+|+|||+|..++.+...+ + |..+|+..|+-. ++-...+..- ..+. .-++.. ...
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~-----------g---~~~~v~~vD~~~-~~~~~a~~~~---~~~~~~~~ln~~~~~~~ 167 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAV-----------G---SQGRVISFEVRK-DHHDLAKKNY---KHWRDSWKLSHVEEWPD 167 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH-----------C---TTCEEEEEESSH-HHHHHHHHHH---HHHHHHHTTTCSSCCCC
T ss_pred CCEEEEeCCCcCHHHHHHHHHh-----------C---CCceEEEEeCCH-HHHHHHHHHH---HHhhcccccccccccCC
Confidence 4799999999999998874432 1 447888888732 1111111000 0000 000000 001
Q ss_pred cceeeccCCCcccC--CCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGR--LFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 139 ~~f~~~vpgSFy~~--l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
+ +.-+.+++.+. -++++++|++++...-+|.
T Consensus 168 ~--v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~--------------------------------------------- 200 (336)
T 2b25_A 168 N--VDFIHKDISGATEDIKSLTFDAVALDMLNPHV--------------------------------------------- 200 (336)
T ss_dssp C--EEEEESCTTCCC-------EEEEEECSSSTTT---------------------------------------------
T ss_pred c--eEEEECChHHcccccCCCCeeEEEECCCCHHH---------------------------------------------
Confidence 1 12244676554 3577889999974221110
Q ss_pred HHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHcc--Cc----ccccccccccCcccCCHHHHHHHHHhc
Q 044727 217 SFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEG--LI----EVSKLESFHFPMYNPCVEEVRQVIERE 290 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG--~i----~~e~~d~f~~P~Y~ps~eE~~~~ie~~ 290 (380)
+|..-.+.|+|||+|++...... .+...+..+...+ .. .+.....+..-...+...+|...++..
T Consensus 201 -~l~~~~~~LkpgG~lv~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~a 271 (336)
T 2b25_A 201 -TLPVFYPHLKHGGVCAVYVVNIT--------QVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESK 271 (336)
T ss_dssp -THHHHGGGEEEEEEEEEEESSHH--------HHHHHHHHHHHHTCCEEEEEEECCCCCCEEECC---------------
T ss_pred -HHHHHHHhcCCCcEEEEEeCCHH--------HHHHHHHHHHhcCCCcccceEEEecccceEEEeecccccchhhhhccc
Confidence 15555889999999998775321 1222223332211 11 111112222222223334899999999
Q ss_pred CceeEeEEEEEe
Q 044727 291 GSFNIHQLETSH 302 (380)
Q Consensus 291 GsF~I~~~e~~~ 302 (380)
| |++.+++...
T Consensus 272 G-F~~v~~~~~~ 282 (336)
T 2b25_A 272 I-NTDVQLDSQE 282 (336)
T ss_dssp ------------
T ss_pred c-cccccccccc
Confidence 9 9987776543
No 155
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.38 E-value=0.00027 Score=67.72 Aligned_cols=78 Identities=13% Similarity=0.060 Sum_probs=49.2
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCC-cceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPP-ILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p-~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
..+|+|+|||+|..++.+.... + ..+|+..|+.. ......+. ..+ ..
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~---------------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~g---~~ 126 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVV---------------GEKGLVVSVEYSR-----------KICEIAKRNVERLG---IE 126 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH---------------CTTCEEEEEESCH-----------HHHHHHHHHHHHTT---CC
T ss_pred cCEEEEecCCchHHHHHHHHhc---------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcC---CC
Confidence 4799999999999888774332 2 36788888742 11111111 112 12
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccc
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWL 171 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWl 171 (380)
+ +.-+-+++...+.+.+++|++++...+|++
T Consensus 127 ~--v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 127 N--VIFVCGDGYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp S--EEEEESCGGGCCGGGCCEEEEEECSBBSCC
T ss_pred C--eEEEECChhhccccCCCeEEEEEcCCHHHH
Confidence 2 222447776656667899999999999874
No 156
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.37 E-value=0.00037 Score=66.67 Aligned_cols=116 Identities=18% Similarity=0.069 Sum_probs=63.0
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhcc-CcchHHHhhhhcCCCCCCc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKS-LPSFYERLKTERGHDDFGS 139 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~-l~~~~~~~~~~~~~~~~~~ 139 (380)
+++.+|+|+|||+|..+..+... .+..+|+..|+-. +.-.+.+. ++.+. ... ...+-
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~---------------~~~~~v~~vDid~-~~i~~a~~~~~~~~----~~~--~~~~v 151 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRH---------------GTVEHCDLVDIDG-EVMEQSKQHFPQIS----RSL--ADPRA 151 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTC---------------TTCCEEEEEESCH-HHHHHHHHHCHHHH----GGG--GCTTE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhC---------------CCCCEEEEEECCH-HHHHHHHHHhHHhh----ccc--CCCcE
Confidence 45689999999999988776211 1346888888742 11111111 11100 000 00011
Q ss_pred ceeeccCCCcccCCC--CCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLF--PPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~--p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
.+ +-+++..-+. +++++|+|++....++.. +..+. . ..
T Consensus 152 ~~---~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~--~~~l~--------------------~---------------~~ 191 (304)
T 3bwc_A 152 TV---RVGDGLAFVRQTPDNTYDVVIIDTTDPAGP--ASKLF--------------------G---------------EA 191 (304)
T ss_dssp EE---EESCHHHHHHSSCTTCEEEEEEECC-----------C--------------------C---------------HH
T ss_pred EE---EECcHHHHHHhccCCceeEEEECCCCcccc--chhhh--------------------H---------------HH
Confidence 23 3356644443 588999999966555411 00000 0 24
Q ss_pred HHHHHHHHhccCceEEEEecc
Q 044727 218 FLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g 238 (380)
||+.-.+.|+|||+|++....
T Consensus 192 ~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 192 FYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp HHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHhcCCCcEEEEecCC
Confidence 577778999999999998643
No 157
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.33 E-value=0.00033 Score=63.10 Aligned_cols=122 Identities=10% Similarity=0.011 Sum_probs=65.8
Q ss_pred CceEEEeecCC-CCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCC
Q 044727 62 DCIRFTDMGCS-SGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDF 137 (380)
Q Consensus 62 ~~~~IaD~GCs-~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~ 137 (380)
...+|+|+||| +|..++.+.... ..+|+..|+-. ......+. ..+ .
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~----------------~~~v~~vD~s~-----------~~~~~a~~~~~~~~---~ 104 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF----------------NCKVTATEVDE-----------EFFEYARRNIERNN---S 104 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH----------------CCEEEEEECCH-----------HHHHHHHHHHHHTT---C
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc----------------CCEEEEEECCH-----------HHHHHHHHHHHHhC---C
Confidence 45899999999 999988773321 26788888732 11111111 111 1
Q ss_pred CcceeeccCCCcc-cCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 138 GSCFIAAAPGSFH-GRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 138 ~~~f~~~vpgSFy-~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
.-.+ +-++.. -..+|++++|++++.-..+|...... .... .++..+ ... ..+..
T Consensus 105 ~v~~---~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~-~~~~---~~~~~~-----~~~-------------~~~~~ 159 (230)
T 3evz_A 105 NVRL---VKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRV-LTER---EAIGGG-----KYG-------------EEFSV 159 (230)
T ss_dssp CCEE---EECSSCSSTTTCCSCEEEEEECCCCC-------------------CC-----SSS-------------CHHHH
T ss_pred CcEE---EeCCchhhhhcccCceeEEEECCCCcCCccccc-cChh---hhhccC-----ccc-------------hHHHH
Confidence 1223 235531 22356799999999877777554211 0000 000000 000 12345
Q ss_pred HHHHHHHHHhccCceEEEEecc
Q 044727 217 SFLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g 238 (380)
.||+.-.+-|+|||++++.+..
T Consensus 160 ~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 160 KLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp HHHHHHGGGEEEEEEEEEEEES
T ss_pred HHHHHHHHHhCCCeEEEEEecc
Confidence 6788889999999999998753
No 158
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.32 E-value=0.00051 Score=66.58 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=67.3
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCc-
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGS- 139 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 139 (380)
+++.+|+|+|||+|..+..+... + |..++...|+-. ......++..+....++
T Consensus 88 p~~~rVLdIG~G~G~la~~la~~--------~-------p~~~v~~VEidp-----------~vi~~Ar~~~~~~~~~rv 141 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFADV--------Y-------PQSRNTVVELDA-----------ELARLSREWFDIPRAPRV 141 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHHHH--------S-------TTCEEEEEESCH-----------HHHHHHHHHSCCCCTTTE
T ss_pred CCCCEEEEEECCcCHHHHHHHHH--------C-------CCcEEEEEECCH-----------HHHHHHHHhccccCCCce
Confidence 44679999999999887766322 2 557788888732 11111111111000011
Q ss_pred ceeeccCCCcccCC--CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRL--FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 140 ~f~~~vpgSFy~~l--~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
.++ -|+...-+ ++++++|+|++-...+| ..|..+.. ..
T Consensus 142 ~v~---~~Da~~~l~~~~~~~fDvIi~D~~~~~--~~~~~L~t-----------------------------------~e 181 (317)
T 3gjy_A 142 KIR---VDDARMVAESFTPASRDVIIRDVFAGA--ITPQNFTT-----------------------------------VE 181 (317)
T ss_dssp EEE---ESCHHHHHHTCCTTCEEEEEECCSTTS--CCCGGGSB-----------------------------------HH
T ss_pred EEE---ECcHHHHHhhccCCCCCEEEECCCCcc--ccchhhhH-----------------------------------HH
Confidence 232 25544322 46789999999776665 22332221 24
Q ss_pred HHHHHHHHhccCceEEEEeccC
Q 044727 218 FLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
|++.-.+.|+|||+|++.....
T Consensus 182 fl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 182 FFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCcEEEEEecCC
Confidence 5777889999999999998754
No 159
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.28 E-value=0.00075 Score=63.11 Aligned_cols=100 Identities=8% Similarity=0.080 Sum_probs=61.9
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCC-CCCc-c
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHD-DFGS-C 140 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~-~~~~-~ 140 (380)
..+|+|+|||+|..++.+...+ . |..+|+..|+.. ......+...... ...+ .
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~-------~-------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~g~~~v~ 165 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYAL-------N-------GKGTLTVVERDE-----------DNLKKAMDNLSEFYDIGNVR 165 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH-------T-------TSSEEEEECSCH-----------HHHHHHHHHHHTTSCCTTEE
T ss_pred cCEEEEecCCCCHHHHHHHHHc-------C-------CCCEEEEEECCH-----------HHHHHHHHHHHhcCCCCcEE
Confidence 4799999999999988774432 1 457899999832 1111111100000 0012 2
Q ss_pred eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 044727 141 FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLK 220 (380)
Q Consensus 141 f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~ 220 (380)
| +.+++.. .+|++++|++++ | +|.. . .+|+
T Consensus 166 ~---~~~d~~~-~~~~~~fD~Vi~----~----~~~~-----------------------~---------------~~l~ 195 (275)
T 1yb2_A 166 T---SRSDIAD-FISDQMYDAVIA----D----IPDP-----------------------W---------------NHVQ 195 (275)
T ss_dssp E---ECSCTTT-CCCSCCEEEEEE----C----CSCG-----------------------G---------------GSHH
T ss_pred E---EECchhc-cCcCCCccEEEE----c----CcCH-----------------------H---------------HHHH
Confidence 3 4577755 778889999997 2 2321 1 1266
Q ss_pred HHHHHhccCceEEEEec
Q 044727 221 FRSEELKTEGRMVLNFI 237 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~ 237 (380)
.-.+.|+|||++++...
T Consensus 196 ~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 196 KIASMMKPGSVATFYLP 212 (275)
T ss_dssp HHHHTEEEEEEEEEEES
T ss_pred HHHHHcCCCCEEEEEeC
Confidence 66888999999999874
No 160
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.28 E-value=0.00098 Score=64.00 Aligned_cols=99 Identities=12% Similarity=0.012 Sum_probs=62.0
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDF 137 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~ 137 (380)
....+|+|+|||+|+.|..++... +..+|+.-|+-. ......+. ..| . .
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~---------------~ga~V~gIDis~-----------~~l~~Ar~~~~~~g-l-~ 172 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHV---------------YGMRVNVVEIEP-----------DIAELSRKVIEGLG-V-D 172 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHT---------------TCCEEEEEESSH-----------HHHHHHHHHHHHHT-C-C
T ss_pred CCcCEEEEECCCccHHHHHHHHHc---------------cCCEEEEEECCH-----------HHHHHHHHHHHhcC-C-C
Confidence 346899999999999887664321 357889889832 11111111 112 1 1
Q ss_pred CcceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 138 GSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 138 ~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
+-.|+. |++.+ +|++++|++++... +|. ...
T Consensus 173 ~v~~v~---gDa~~--l~d~~FDvV~~~a~------~~d--------------------------------------~~~ 203 (298)
T 3fpf_A 173 GVNVIT---GDETV--IDGLEFDVLMVAAL------AEP--------------------------------------KRR 203 (298)
T ss_dssp SEEEEE---SCGGG--GGGCCCSEEEECTT------CSC--------------------------------------HHH
T ss_pred CeEEEE---Cchhh--CCCCCcCEEEECCC------ccC--------------------------------------HHH
Confidence 224533 66655 47899999997543 121 123
Q ss_pred HHHHHHHHhccCceEEEEe
Q 044727 218 FLKFRSEELKTEGRMVLNF 236 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~ 236 (380)
+|+.-.+.|||||++++..
T Consensus 204 ~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 204 VFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEc
Confidence 3667789999999999876
No 161
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.27 E-value=0.0004 Score=62.76 Aligned_cols=85 Identities=15% Similarity=0.051 Sum_probs=47.0
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhc-----CCCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTER-----GHDDF 137 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~-----~~~~~ 137 (380)
..+|+|+|||+|..+..+.... .. .+ ..+..+|+..|.-. +.-...+ ....... . .
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~----~~----~~-~~~~~~v~~vD~~~-~~~~~a~------~~~~~~~~~~~~~-~-- 145 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYI----KA----KG-VDADTRIVGIEHQA-ELVRRSK------ANLNTDDRSMLDS-G-- 145 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH----HH----SC-CCTTCEEEEEESCH-HHHHHHH------HHHHHHHHHHHHH-T--
T ss_pred CCEEEEECCCccHHHHHHHHhc----cc----cc-CCccCEEEEEEcCH-HHHHHHH------HHHHhcCccccCC-C--
Confidence 4799999999999998874432 10 00 01235888888732 1111000 0000000 0 0
Q ss_pred CcceeeccCCCcccCCCCC-CccceEEccccccc
Q 044727 138 GSCFIAAAPGSFHGRLFPP-CFLNLVYSSFCLHW 170 (380)
Q Consensus 138 ~~~f~~~vpgSFy~~l~p~-~svdl~~Ss~alhW 170 (380)
+-.+ +.++... .+|+ +++|++++..++||
T Consensus 146 ~v~~---~~~d~~~-~~~~~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 146 QLLI---VEGDGRK-GYPPNAPYNAIHVGAAAPD 175 (227)
T ss_dssp SEEE---EESCGGG-CCGGGCSEEEEEECSCBSS
T ss_pred ceEE---EECCccc-CCCcCCCccEEEECCchHH
Confidence 1123 3366654 4555 88999999998887
No 162
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.27 E-value=0.0022 Score=59.41 Aligned_cols=106 Identities=14% Similarity=0.132 Sum_probs=63.4
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..+..+...+ .|..+|+..|+-. +.-...+ .......| ....+ +
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~~~-~~~~~a~------~~~~~~~g-~~~~~--v 155 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAV--------------GPAGQVISYEQRA-DHAEHAR------RNVSGCYG-QPPDN--W 155 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEECSCH-HHHHHHH------HHHHHHHT-SCCTT--E
T ss_pred CCEEEEEcccccHHHHHHHHHh--------------CCCCEEEEEeCCH-HHHHHHH------HHHHHhcC-CCCCc--E
Confidence 4699999999999998774432 1457888888732 1111000 00110001 00011 1
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
..+.+++.+..++++++|++++. +|. +. .+|+.-
T Consensus 156 ~~~~~d~~~~~~~~~~~D~v~~~--------~~~-----------------------~~---------------~~l~~~ 189 (280)
T 1i9g_A 156 RLVVSDLADSELPDGSVDRAVLD--------MLA-----------------------PW---------------EVLDAV 189 (280)
T ss_dssp EEECSCGGGCCCCTTCEEEEEEE--------SSC-----------------------GG---------------GGHHHH
T ss_pred EEEECchHhcCCCCCceeEEEEC--------CcC-----------------------HH---------------HHHHHH
Confidence 22457887777888999999972 121 11 126666
Q ss_pred HHHhccCceEEEEecc
Q 044727 223 SEELKTEGRMVLNFIG 238 (380)
Q Consensus 223 a~eL~pgG~l~~~~~g 238 (380)
.+.|+|||++++....
T Consensus 190 ~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 190 SRLLVAGGVLMVYVAT 205 (280)
T ss_dssp HHHEEEEEEEEEEESS
T ss_pred HHhCCCCCEEEEEeCC
Confidence 8899999999998863
No 163
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.26 E-value=0.00097 Score=66.80 Aligned_cols=127 Identities=13% Similarity=0.045 Sum_probs=74.1
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..|..+.... +..+|+.+|....=...+-. .++ ..| ....+
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~---------------~~~~v~a~D~~~~~l~~~~~-------~~~-~~g---~~~~~- 299 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVA---------------PEAQVVAVDIDEQRLSRVYD-------NLK-RLG---MKATV- 299 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHC---------------TTCEEEEEESSTTTHHHHHH-------HHH-HTT---CCCEE-
T ss_pred cCeEEEECCCchHHHHHHHHHc---------------CCCEEEEECCCHHHHHHHHH-------HHH-HcC---CCeEE-
Confidence 4699999999999999884432 33789999985421111111 111 112 12223
Q ss_pred eccCCCcccCC--CCCCccceEEc---ccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRL--FPPCFLNLVYS---SFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 143 ~~vpgSFy~~l--~p~~svdl~~S---s~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
+.+++.... ++++++|+|++ .+....+.+.|...... + +..+ ....+....
T Consensus 300 --~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~---------------~--~~~~-----~~l~~~q~~ 355 (429)
T 1sqg_A 300 --KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR---------------R--DRDI-----PELAQLQSE 355 (429)
T ss_dssp --EECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHC---------------C--TTHH-----HHHHHHHHH
T ss_pred --EeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcC---------------C--HHHH-----HHHHHHHHH
Confidence 335553332 56789999986 34445555555432110 0 1212 222334456
Q ss_pred HHHHHHHHhccCceEEEEeccCC
Q 044727 218 FLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
+|+.-.+-|+|||+|++++..-.
T Consensus 356 ~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 356 ILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HHHHHGGGEEEEEEEEEEESCCC
T ss_pred HHHHHHHhcCCCCEEEEEECCCC
Confidence 78888899999999999987654
No 164
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.25 E-value=0.00091 Score=61.37 Aligned_cols=34 Identities=12% Similarity=-0.056 Sum_probs=26.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..++.+.... |..+|+..|+.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~---------------~~~~v~gvD~s 98 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL---------------NGWYFLATEVD 98 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH---------------HCCEEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC---------------CCCeEEEEECC
Confidence 35799999999999998874432 34788888973
No 165
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.22 E-value=0.0005 Score=61.86 Aligned_cols=87 Identities=10% Similarity=-0.070 Sum_probs=47.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCC---CCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGH---DDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~---~~~~~ 139 (380)
..+|+|+|||+|..+..+.... . ....|..+|+..|.-. +.-... ...... .+. ...+-
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~--------~--~~~~~~~~v~~vD~~~-~~~~~a------~~~~~~-~~~~~~~~~~v 142 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKM--------N--VLENKNSYVIGLERVK-DLVNFS------LENIKR-DKPELLKIDNF 142 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHT--------T--TTTCTTCEEEEEESCH-HHHHHH------HHHHHH-HCGGGGSSTTE
T ss_pred CCEEEEECCCCCHHHHHHHHHh--------c--ccCCCCCEEEEEeCCH-HHHHHH------HHHHHH-cCccccccCCE
Confidence 4799999999999888773321 0 0011446888888732 000000 000110 000 00012
Q ss_pred ceeeccCCCcccCC----CCCCccceEEccccccc
Q 044727 140 CFIAAAPGSFHGRL----FPPCFLNLVYSSFCLHW 170 (380)
Q Consensus 140 ~f~~~vpgSFy~~l----~p~~svdl~~Ss~alhW 170 (380)
.| +-+++...+ .+.+++|++++..++|+
T Consensus 143 ~~---~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 143 KI---IHKNIYQVNEEEKKELGLFDAIHVGASASE 174 (227)
T ss_dssp EE---EECCGGGCCHHHHHHHCCEEEEEECSBBSS
T ss_pred EE---EECChHhcccccCccCCCcCEEEECCchHH
Confidence 23 346776544 56788999999988876
No 166
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.22 E-value=0.0028 Score=56.32 Aligned_cols=26 Identities=12% Similarity=0.147 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhccCceEEEEeccC
Q 044727 214 DFTSFLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 214 D~~~FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
.....|+.-.+.|+|||.|++.++..
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 34556777789999999999988744
No 167
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.22 E-value=0.00036 Score=65.78 Aligned_cols=32 Identities=13% Similarity=0.189 Sum_probs=23.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..++.+. +. ...+|+..|++
T Consensus 80 ~~~vLDlG~G~G~~~~~~a--------~~--------~~~~v~~~D~s 111 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAF--------LA--------GADQVVATDYP 111 (281)
T ss_dssp TCEEEETTCTTSHHHHHHH--------HT--------TCSEEEEEECS
T ss_pred CCeEEEecccccHHHHHHH--------Hc--------CCCEEEEEeCC
Confidence 4699999999999887652 11 11489999984
No 168
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.19 E-value=0.00032 Score=65.18 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=26.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..++.+... + |..+|+..|.-
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~--------~-------~~~~v~~vD~s 113 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV--------R-------PELELVLVDAT 113 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH--------C-------TTCEEEEEESC
T ss_pred CCCEEEEEcCCCCHHHHHHHHH--------C-------CCCEEEEEECC
Confidence 4579999999999999887321 1 56899999974
No 169
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.19 E-value=0.0012 Score=63.34 Aligned_cols=129 Identities=12% Similarity=-0.037 Sum_probs=69.4
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..|+.+.+.+ .+..+|+.+|+... .+.......+ ..| ..+ +
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~--------------~~~~~v~avD~s~~-------~l~~a~~~~~-~~g---~~~--v 171 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLM--------------RNDGVIYAFDVDEN-------RLRETRLNLS-RLG---VLN--V 171 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHT--------------TTCSEEEEECSCHH-------HHHHHHHHHH-HHT---CCS--E
T ss_pred CCEEEEeCCCCCHHHHHHHHHh--------------CCCCEEEEEcCCHH-------HHHHHHHHHH-HhC---CCe--E
Confidence 4799999999999999874432 13478999998431 0011111111 112 112 1
Q ss_pred eccCCCcccCCCCCCccceEEcc---cccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSS---FCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss---~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
..+-+++..-..+++++|+|++. +.+.-+.+.|..... . + +..+ ....+.-..+|
T Consensus 172 ~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~---------------~-~-~~~~-----~~~~~~q~~~L 229 (315)
T 1ixk_A 172 ILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWN---------------R-T-MDDI-----KFCQGLQMRLL 229 (315)
T ss_dssp EEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC-----------------------C-C-HHHH-----HHHHHHHHHHH
T ss_pred EEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhc---------------C-C-HHHH-----HHHHHHHHHHH
Confidence 22446664433356789999862 112212222321110 0 0 1112 22344456789
Q ss_pred HHHHHHhccCceEEEEeccCC
Q 044727 220 KFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
+.-.+-|||||+|++++....
T Consensus 230 ~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 230 EKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp HHHHHHEEEEEEEEEEESCCC
T ss_pred HHHHHhCCCCCEEEEEeCCCC
Confidence 988999999999999887554
No 170
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.19 E-value=0.00027 Score=71.32 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=26.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..++.+.... +..+|+.-|+.
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~---------------g~~~V~GVDis 275 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALEC---------------GCALSFGCEIM 275 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH---------------CCSEEEEEECC
T ss_pred CCCEEEEeCCCcCHHHHHHHHHC---------------CCCEEEEEeCC
Confidence 35799999999999999884432 33578888874
No 171
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.18 E-value=0.00036 Score=60.14 Aligned_cols=21 Identities=29% Similarity=0.529 Sum_probs=17.1
Q ss_pred HHHHHHHHhccCceEEEEecc
Q 044727 218 FLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g 238 (380)
+|+.-.+.|+|||++++....
T Consensus 116 ~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 116 ILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp HHHHHHHTEEEEEEEEEEECB
T ss_pred HHHHHHHhcCCCcEEEEEecC
Confidence 466668899999999998753
No 172
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.16 E-value=0.00044 Score=66.51 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=66.2
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhcc-CcchHHHhhhhcC-CCCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKS-LPSFYERLKTERG-HDDFG 138 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~-l~~~~~~~~~~~~-~~~~~ 138 (380)
+++.+|+|+|||+|..+..+... .+..+|+..|+-. +.-.+.+. ++.. ..+ .+...
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~---------------~~~~~v~~vDid~-~~i~~ar~~~~~~------~~~~~~~~~ 133 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKH---------------PTVEKAVMVDIDG-ELVEVAKRHMPEW------HQGAFDDPR 133 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS---------------TTCCEEEEEESCH-HHHHHHHHHCHHH------HTTGGGCTT
T ss_pred CCCCeEEEEcCCcCHHHHHHHhc---------------CCCCEEEEEECCH-HHHHHHHHHhHhh------ccccccCCc
Confidence 45689999999999988776211 1346888888742 11111111 1100 000 00001
Q ss_pred cceeeccCCCcccCC-CCCCccceEEccccccc-ccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRL-FPPCFLNLVYSSFCLHW-LSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFT 216 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l-~p~~svdl~~Ss~alhW-ls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~ 216 (380)
--+ +-|+...-+ .+++++|++++....|| ++..+..+. ..
T Consensus 134 v~~---~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~-----------------------------------~~ 175 (314)
T 1uir_A 134 AVL---VIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLY-----------------------------------TV 175 (314)
T ss_dssp EEE---EESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGS-----------------------------------SH
T ss_pred eEE---EEchHHHHHHhcCCCccEEEECCCCcccccCcchhcc-----------------------------------HH
Confidence 122 234543321 24788999999888777 211111111 12
Q ss_pred HHHHHHHHHhccCceEEEEeccC
Q 044727 217 SFLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
.|++.-.+.|+|||++++....+
T Consensus 176 ~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 176 EFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEccCc
Confidence 45777789999999999986543
No 173
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.15 E-value=0.00094 Score=60.54 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=25.9
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..+..+.+.+ + |..+|+.-|+.
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~-----------g---~~~~v~gvD~s 111 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIV-----------G---PDGLVYAVEFS 111 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH-----------C---TTCEEEEECCC
T ss_pred CCEEEEEcccCCHHHHHHHHHh-----------C---CCcEEEEEECC
Confidence 4799999999999998884432 1 34688888874
No 174
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.15 E-value=0.00085 Score=62.64 Aligned_cols=75 Identities=15% Similarity=0.163 Sum_probs=43.4
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..++.+.+.+ .|..+|+..|+.. +.-...+ .... ..+.. .+ +
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~--------------~~~~~v~~vD~s~-~~~~~a~------~~~~-~~~~~--~~--v 166 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAV--------------GSSGKVFAYEKRE-EFAKLAE------SNLT-KWGLI--ER--V 166 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHT--------------TTTCEEEEECCCH-HHHHHHH------HHHH-HTTCG--GG--E
T ss_pred CCEEEEECCcCCHHHHHHHHHh--------------CCCcEEEEEECCH-HHHHHHH------HHHH-HcCCC--CC--E
Confidence 4699999999999988774332 1457899999732 1100000 0000 01100 11 2
Q ss_pred eccCCCcccCCCCCCccceEEc
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYS 164 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~S 164 (380)
..+.+++.+. +|++++|++++
T Consensus 167 ~~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 167 TIKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp EEECCCGGGC-CSCCSEEEEEE
T ss_pred EEEECCHHHc-ccCCccCEEEE
Confidence 2245777554 78889999997
No 175
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.14 E-value=0.0021 Score=61.45 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhccCceEEEEeccC
Q 044727 216 TSFLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
...|+.-.+.|||||++++..+..
T Consensus 151 ~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 151 TYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECSS
T ss_pred HHHHHHHHHhcCCCcEEEEEEecc
Confidence 455777789999999999977643
No 176
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.14 E-value=8e-05 Score=67.82 Aligned_cols=82 Identities=16% Similarity=0.021 Sum_probs=51.5
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+... ..+|+..|+.. .....++. ..+.. ..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-~~ 128 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-----------------GMRVIAIDIDP-----------VKIALARNNAEVYGIA-DK 128 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHHHHHHTTCG-GG
T ss_pred CCCEEEECccccCHHHHHHHHc-----------------CCEEEEEECCH-----------HHHHHHHHHHHHcCCC-cC
Confidence 3579999999999999887321 26788888742 11111111 11100 01
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCc
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPK 176 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~ 176 (380)
-.| +-+++...+ +++++|++++...+||......
T Consensus 129 ~~~---~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~ 162 (241)
T 3gdh_A 129 IEF---ICGDFLLLA-SFLKADVVFLSPPWGGPDYATA 162 (241)
T ss_dssp EEE---EESCHHHHG-GGCCCSEEEECCCCSSGGGGGS
T ss_pred eEE---EECChHHhc-ccCCCCEEEECCCcCCcchhhh
Confidence 233 447775544 7889999999999999766543
No 177
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.14 E-value=0.0009 Score=56.83 Aligned_cols=19 Identities=26% Similarity=0.148 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCccchHH
Q 044727 62 DCIRFTDMGCSSGPNAFLP 80 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~ 80 (380)
...+|+|+|||+|..++.+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l 59 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEA 59 (171)
T ss_dssp TCCEEEEETCSSCHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHH
Confidence 3478999999999988877
No 178
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.10 E-value=0.0019 Score=61.61 Aligned_cols=117 Identities=13% Similarity=0.019 Sum_probs=62.2
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhcc-CcchHHHhhhhcC-CCCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKS-LPSFYERLKTERG-HDDFG 138 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~-l~~~~~~~~~~~~-~~~~~ 138 (380)
+++.+|+|+|||+|..+..++. . .+..+|...|+-. +.-.+.+. ++.. ..+ .+..+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~V~~VDid~-~vi~~ar~~~~~~------~~~~~~~~r 139 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTR--------H-------KNVESITMVEIDA-GVVSFCRQYLPNH------NAGSYDDPR 139 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHT--------C-------TTCCEEEEECSCT-THHHHHHHHCHHH------HSSCTTCTT
T ss_pred CCCCEEEEEeCChhHHHHHHHh--------C-------CCCCEEEEEECCH-HHHHHHHHhhhhc------ccccccCCc
Confidence 4578999999999998876621 1 1447888899843 11111111 1110 000 00001
Q ss_pred cceeeccCCCcccCC-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRL-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
--++ -|+...-+ .+++++|+|++-..-+| .|.. .. .-..
T Consensus 140 v~~~---~~D~~~~l~~~~~~fDvIi~D~~~p~---~~~~---------------------------~l-------~~~~ 179 (294)
T 3adn_A 140 FKLV---IDDGVNFVNQTSQTFDVIISDCTDPI---GPGE---------------------------SL-------FTSA 179 (294)
T ss_dssp CCEE---CSCSCC---CCCCCEEEEEECC-----------------------------------------------CCHH
T ss_pred eEEE---EChHHHHHhhcCCCccEEEECCCCcc---Ccch---------------------------hc-------cHHH
Confidence 1232 24443322 25789999999554433 1110 00 0034
Q ss_pred HHHHHHHHhccCceEEEEeccC
Q 044727 218 FLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
|++.-.+.|+|||+|++....+
T Consensus 180 f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 180 FYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp HHHHHHHTEEEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEecCCc
Confidence 6777899999999999987544
No 179
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.10 E-value=0.00065 Score=58.55 Aligned_cols=33 Identities=21% Similarity=0.053 Sum_probs=24.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..++.+.. . +..+|+..|+-
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~--------~--------~~~~v~~vD~~ 63 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVS--------R--------GMSAAVLVEKN 63 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHH--------T--------TCCEEEEECCC
T ss_pred CCCeEEEeCCCCCHHHHHHHH--------c--------CCCEEEEEECC
Confidence 357999999999999887621 1 23688999973
No 180
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.10 E-value=0.0014 Score=58.75 Aligned_cols=35 Identities=17% Similarity=-0.046 Sum_probs=26.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..+..+.... + +..+|+..|+.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~-----------~---~~~~v~~vD~s 111 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMV-----------G---CTGKVIGIDHI 111 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-----------C---TTCEEEEEESC
T ss_pred CCCEEEEEcCCcCHHHHHHHHHh-----------C---CCcEEEEEeCC
Confidence 35799999999999998774322 1 34688888873
No 181
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.10 E-value=0.0011 Score=60.59 Aligned_cols=103 Identities=12% Similarity=0.057 Sum_probs=61.6
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..++.+...+ + |..+|+..|... +.-...+ .......|.. .-.|
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~-----------~---~~~~v~~~D~~~-~~~~~a~------~~~~~~~g~~--~v~~- 152 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAV-----------G---EKGLVESYEARP-HHLAQAE------RNVRAFWQVE--NVRF- 152 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEEESCH-HHHHHHH------HHHHHHCCCC--CEEE-
T ss_pred CCEEEEECCCcCHHHHHHHHHh-----------C---CCCEEEEEeCCH-HHHHHHH------HHHHHhcCCC--CEEE-
Confidence 4799999999999998774432 1 447888888732 1000000 0011000101 1123
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
+.+++.+..+|++++|++++. .|.. . .+|+.-
T Consensus 153 --~~~d~~~~~~~~~~~D~v~~~--------~~~~-----------------------~---------------~~l~~~ 184 (258)
T 2pwy_A 153 --HLGKLEEAELEEAAYDGVALD--------LMEP-----------------------W---------------KVLEKA 184 (258)
T ss_dssp --EESCGGGCCCCTTCEEEEEEE--------SSCG-----------------------G---------------GGHHHH
T ss_pred --EECchhhcCCCCCCcCEEEEC--------CcCH-----------------------H---------------HHHHHH
Confidence 347776555888999999972 1211 1 126666
Q ss_pred HHHhccCceEEEEec
Q 044727 223 SEELKTEGRMVLNFI 237 (380)
Q Consensus 223 a~eL~pgG~l~~~~~ 237 (380)
.+.|+|||++++...
T Consensus 185 ~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 185 ALALKPDRFLVAYLP 199 (258)
T ss_dssp HHHEEEEEEEEEEES
T ss_pred HHhCCCCCEEEEEeC
Confidence 889999999999874
No 182
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.09 E-value=0.0015 Score=61.39 Aligned_cols=99 Identities=6% Similarity=-0.154 Sum_probs=60.6
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
..+|+|+|||+|..|+.+... . +. +|+..|+.. .....++. .++.. +.
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~--------~-------~~-~V~~vD~s~-----------~~~~~a~~n~~~n~~~--~~ 176 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVY--------G-------KA-KVIAIEKDP-----------YTFKFLVENIHLNKVE--DR 176 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHH--------T-------CC-EEEEECCCH-----------HHHHHHHHHHHHTTCT--TT
T ss_pred CCEEEEecccCCHHHHHHHHh--------C-------CC-EEEEEECCH-----------HHHHHHHHHHHHcCCC--ce
Confidence 479999999999999887332 1 33 799999842 11111111 11211 11
Q ss_pred c-eeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 140 C-FIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 140 ~-f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
+ | +-|+..+-+. ++++|++++. .|... ..|
T Consensus 177 v~~---~~~D~~~~~~-~~~fD~Vi~~--------~p~~~-------------------------------------~~~ 207 (278)
T 2frn_A 177 MSA---YNMDNRDFPG-ENIADRILMG--------YVVRT-------------------------------------HEF 207 (278)
T ss_dssp EEE---ECSCTTTCCC-CSCEEEEEEC--------CCSSG-------------------------------------GGG
T ss_pred EEE---EECCHHHhcc-cCCccEEEEC--------CchhH-------------------------------------HHH
Confidence 2 4 4477755444 8899999872 23210 122
Q ss_pred HHHHHHHhccCceEEEEeccC
Q 044727 219 LKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~ 239 (380)
|..-.+.|+|||++++....+
T Consensus 208 l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 208 IPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp HHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHCCCCeEEEEEEeec
Confidence 555578999999999988764
No 183
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.05 E-value=0.0012 Score=60.58 Aligned_cols=38 Identities=8% Similarity=-0.142 Sum_probs=27.4
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPG 111 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~ 111 (380)
+.+|+|+|||+|..|+.+...+ +... |..+|+..|+..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~----~~~~-------~~~~V~gvD~s~ 119 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLT----KIMG-------IDCQVIGIDRDL 119 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHH----HHTT-------CCCEEEEEESCC
T ss_pred CCEEEEEeCCCCHHHHHHHHhh----hhcC-------CCCEEEEEeCCh
Confidence 4699999999999999874432 1111 457899989843
No 184
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.03 E-value=0.00065 Score=65.27 Aligned_cols=22 Identities=9% Similarity=0.217 Sum_probs=17.7
Q ss_pred HHHHHHHHhccCceEEEEeccC
Q 044727 218 FLKFRSEELKTEGRMVLNFIGN 239 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~ 239 (380)
.|..-.+.|+|||.+++.++..
T Consensus 173 ~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp HHHHHHHHCCTTCEEEEEESCC
T ss_pred HHHHHHHHhCCCCEEEEEeCCC
Confidence 4666678999999999987754
No 185
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.00 E-value=0.0068 Score=54.38 Aligned_cols=34 Identities=18% Similarity=-0.028 Sum_probs=25.5
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..++.+.+.+ + |..+|+..|..
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~-----------~---~~~~v~~vD~s 107 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIV-----------G---WEGKIFGIEFS 107 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHH-----------C---TTSEEEEEESC
T ss_pred CCEEEEEeccCCHHHHHHHHHh-----------C---CCeEEEEEECC
Confidence 4699999999999998884443 1 33678888863
No 186
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.00 E-value=0.0034 Score=61.00 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=44.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
+..+|+|+|||+|..++.+.. . +..+|+..|+. ..-...+ ... ..++.. ..-.+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~--------~--------g~~~V~~vD~s--~~~~~a~------~~~-~~~~l~-~~v~~ 103 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQ--------A--------GARKIYAVEAS--TMAQHAE------VLV-KSNNLT-DRIVV 103 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--------T--------TCSEEEEEECS--THHHHHH------HHH-HHTTCT-TTEEE
T ss_pred CcCEEEEcCCCccHHHHHHHh--------C--------CCCEEEEECCH--HHHHHHH------HHH-HHcCCC-CcEEE
Confidence 347999999999998876621 1 23689999973 2111111 111 111100 01123
Q ss_pred eeccCCCcccCCCCCCccceEEcccccc
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLH 169 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alh 169 (380)
+.+++.+-.+| .++|+++|...++
T Consensus 104 ---~~~d~~~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 104 ---IPGKVEEVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp ---EESCTTTCCCS-SCEEEEEECCCBT
T ss_pred ---EEcchhhCCCC-CceeEEEEeCchh
Confidence 44666443444 6899999987654
No 187
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.96 E-value=0.00063 Score=60.68 Aligned_cols=32 Identities=16% Similarity=-0.002 Sum_probs=23.8
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..++.++.. . . .+|+..|+.
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~--------~-------~-~~v~gvD~s 85 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSR--------Q-------A-KKVTFLELD 85 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHT--------T-------C-SEEEEECSC
T ss_pred CCeEEEcCCccCHHHHHHHHc--------c-------C-CEEEEEECC
Confidence 469999999999998875221 0 2 578888974
No 188
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.92 E-value=0.0013 Score=59.57 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=25.5
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..++.+.... |..+|+..|..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~---------------~~~~v~~vD~~ 87 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQAL---------------PEATIVSIERD 87 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHC---------------TTCEEEEECCC
T ss_pred CCEEEEecCCCcHHHHHHHHHC---------------CCCEEEEEECC
Confidence 4699999999999988774332 34788888873
No 189
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.91 E-value=0.00085 Score=61.88 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=26.5
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
.+.+|+|+|||+|..|+.+...+ ++..+|+..|+.
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~s 97 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMAREL--------------PADGQLLTLEAD 97 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEECC
T ss_pred CCCEEEEecCCchHHHHHHHHhC--------------CCCCEEEEEECC
Confidence 35799999999999998773322 125789999983
No 190
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.91 E-value=0.0011 Score=60.29 Aligned_cols=34 Identities=9% Similarity=0.072 Sum_probs=26.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
++.+|+|+|||+|..++.+... .|..+|+..|+-
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~---------------~~~~~v~~vD~~ 104 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASI---------------SDDIHVTTIERN 104 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTT---------------CTTCEEEEEECC
T ss_pred CCCEEEEEeCchhHHHHHHHHh---------------CCCCEEEEEECC
Confidence 3579999999999999887321 145789999983
No 191
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.91 E-value=0.0021 Score=57.52 Aligned_cols=32 Identities=19% Similarity=-0.021 Sum_probs=24.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..++.+... ..+|+..|+-
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~-----------------~~~v~~vD~s 86 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA-----------------GGRAITIEPR 86 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-----------------TCEEEEEESC
T ss_pred CCCEEEEecCCCCHHHHHHHHc-----------------CCEEEEEeCC
Confidence 3479999999999998877221 2678888873
No 192
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.90 E-value=0.0011 Score=62.65 Aligned_cols=119 Identities=13% Similarity=0.070 Sum_probs=67.4
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhh---hhcCCCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLK---TERGHDDF 137 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~---~~~~~~~~ 137 (380)
+.|.+|+|+|||.|+.|+.++. ..|..+++..|.-. ...+... ...| .
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~---------------~~p~a~y~a~DId~-----------~~le~a~~~l~~~g---~ 181 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMG---------------LPAETVYIASDIDA-----------RLVGFVDEALTRLN---V 181 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTT---------------CCTTCEEEEEESBH-----------HHHHHHHHHHHHTT---C
T ss_pred CCCceeeeeccCccHHHHHHHh---------------hCCCCEEEEEeCCH-----------HHHHHHHHHHHhcC---C
Confidence 4588999999999999998822 22668999888832 1111111 1112 1
Q ss_pred CcceeeccCCCcccCCCCCCccceEEcccccccccCCCcc-ccccCCCCCCCCccEEEccCC-----CCHHHHHHHHHHH
Q 044727 138 GSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKE-LVSECGIPLLNKRDVCVAKTC-----SPFSVHKAYLDQF 211 (380)
Q Consensus 138 ~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~-~~~~~~~~~~nkg~i~~~~~s-----~~~~~~~ay~~Q~ 211 (380)
+..|.. .++-... |+...|++.++-++|-|.+-... ...- -.++|.++|.|+-.. +++...+-|.++|
T Consensus 182 ~~~~~v---~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~~l--l~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~ 255 (281)
T 3lcv_B 182 PHRTNV---ADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGWEV--IDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSF 255 (281)
T ss_dssp CEEEEE---CCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHHHH--HHHSSCSEEEEEEECC-------CHHHHHHHHH
T ss_pred CceEEE---eeecccC-CCCCcchHHHHHHHHHhhhhhhHHHHHH--HHHhCCCCEEEeccchhhcCCCcchhhHHHHHH
Confidence 222222 4553444 78889999999999998654321 1100 023455555555443 3455555566655
Q ss_pred HHH
Q 044727 212 EID 214 (380)
Q Consensus 212 ~~D 214 (380)
+++
T Consensus 256 e~~ 258 (281)
T 3lcv_B 256 ESQ 258 (281)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 193
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.89 E-value=0.001 Score=56.97 Aligned_cols=72 Identities=14% Similarity=0.071 Sum_probs=44.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+.. +..+++..|... ......+. ..+ ..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-----------------~~~~v~~vD~~~-----------~~~~~a~~~~~~~~---~~ 83 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-----------------RCKFVYAIDYLD-----------GAIEVTKQNLAKFN---IK 83 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-----------------TSSEEEEEECSH-----------HHHHHHHHHHHHTT---CC
T ss_pred CCCEEEEeCCCCCHHHHHHHh-----------------cCCeEEEEeCCH-----------HHHHHHHHHHHHcC---CC
Confidence 357999999999998887722 247888888732 11111111 111 11
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccc
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFC 167 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~a 167 (380)
+ +.-+.+++.+ .+|++++|++++...
T Consensus 84 ~--~~~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 84 N--CQIIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp S--EEEEESCHHH-HGGGCCCSEEEECSC
T ss_pred c--EEEEECCccc-cccCCCCcEEEECCc
Confidence 2 1124477766 677789999998766
No 194
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.87 E-value=0.0048 Score=57.93 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=18.0
Q ss_pred HHHHHHHHhccCc--eEEEEecc
Q 044727 218 FLKFRSEELKTEG--RMVLNFIG 238 (380)
Q Consensus 218 FL~~Ra~eL~pgG--~l~~~~~g 238 (380)
.|..-.+.|+||| .+++..+.
T Consensus 165 ~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 165 ILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHHhccCCCeEEEEEeCC
Confidence 5777788999999 99998877
No 195
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.83 E-value=0.0015 Score=59.84 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=26.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
+..+|+|+|||+|..++.+.... |...|+..|..
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~---------------~~~~v~gvD~s 82 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAF---------------PEDLILGMEIR 82 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHS---------------TTSEEEEEESC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC---------------CCCCEEEEEcC
Confidence 34799999999999998873321 55789999974
No 196
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.82 E-value=0.0033 Score=63.32 Aligned_cols=130 Identities=9% Similarity=-0.006 Sum_probs=70.8
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..|..+...+ +...+|+.+|....= +........ ..| ..++
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~--------------~~~~~v~a~D~s~~~-------l~~~~~~~~-~~g---~~~v-- 312 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELM--------------KNKGKIYAFDVDKMR-------MKRLKDFVK-RMG---IKIV-- 312 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT--------------TTCSEEEEECSCHHH-------HHHHHHHHH-HTT---CCSE--
T ss_pred cCEEEEeCCCccHHHHHHHHHc--------------CCCCEEEEEcCCHHH-------HHHHHHHHH-HcC---CCcE--
Confidence 3699999999999999884432 023789999984310 000001111 112 1121
Q ss_pred eccCCCcccCC--CCCCccceEEc---ccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRL--FPPCFLNLVYS---SFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 143 ~~vpgSFy~~l--~p~~svdl~~S---s~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
..+.+++..-. ++++++|.+++ .+.+.-+.+.|......+ +..+ ....+.-..
T Consensus 313 ~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~-----------------~~~~-----~~l~~~q~~ 370 (450)
T 2yxl_A 313 KPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLR-----------------EDKI-----NEMSQLQRE 370 (450)
T ss_dssp EEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCC-----------------TTSH-----HHHHHHHHH
T ss_pred EEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCC-----------------HHHH-----HHHHHHHHH
Confidence 12345553322 56688999985 233333334443211100 1112 111222256
Q ss_pred HHHHHHHHhccCceEEEEeccCCC
Q 044727 218 FLKFRSEELKTEGRMVLNFIGNDK 241 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~~ 241 (380)
+|+.-.+-|+|||+|++++....+
T Consensus 371 iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 371 LLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp HHHHHHTTEEEEEEEEEEESCCCG
T ss_pred HHHHHHHhcCCCcEEEEEeCCCCh
Confidence 688888999999999999876553
No 197
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.80 E-value=0.0073 Score=57.04 Aligned_cols=111 Identities=12% Similarity=0.026 Sum_probs=61.2
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..|..+.+. .+|+..|+-.- ....... ... ... ..++-.|+
T Consensus 83 g~~VLDlGcGtG~~s~~la~~------------------~~V~gVD~s~m-----~~~a~~~--~~~-~~~-~~~~v~~~ 135 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ------------------PNVREVKAYTL-----GTSGHEK--PRL-VET-FGWNLITF 135 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS------------------TTEEEEEEECC-----CCTTSCC--CCC-CCC-TTGGGEEE
T ss_pred CCEEEEeccCCCHHHHHHHHc------------------CCEEEEECchh-----hhhhhhc--hhh-hhh-cCCCeEEE
Confidence 479999999999988776221 35666676321 0000000 000 000 00012332
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKFR 222 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~R 222 (380)
. --|++.. +|++++|+++|..+ ++... |. .+ .+ +.+ ..|+.-
T Consensus 136 ~-~~~D~~~--l~~~~fD~Vvsd~~-~~~~~-~~--~d-------------------------~~-----~~l-~~L~~~ 177 (276)
T 2wa2_A 136 K-SKVDVTK--MEPFQADTVLCDIG-ESNPT-AA--VE-------------------------AS-----RTL-TVLNVI 177 (276)
T ss_dssp E-CSCCGGG--CCCCCCSEEEECCC-CCCSC-HH--HH-------------------------HH-----HHH-HHHHHH
T ss_pred e-ccCcHhh--CCCCCcCEEEECCC-cCCCc-hh--hh-------------------------HH-----HHH-HHHHHH
Confidence 0 0467755 57899999999877 55211 11 11 00 001 157777
Q ss_pred HHHhccCc--eEEEEecc
Q 044727 223 SEELKTEG--RMVLNFIG 238 (380)
Q Consensus 223 a~eL~pgG--~l~~~~~g 238 (380)
.+.|+||| .+++..+.
T Consensus 178 ~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 178 SRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp HHHHHHSTTCEEEEEESC
T ss_pred HHHhccCCCcEEEEEeCC
Confidence 88999999 99998877
No 198
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.79 E-value=0.0025 Score=56.76 Aligned_cols=32 Identities=16% Similarity=0.012 Sum_probs=23.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..++.++.. + . -+|+..|+.
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~------------~---~-~~V~~vD~s 86 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSR------------Y---A-AGATLIEMD 86 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHT------------T---C-SEEEEECSC
T ss_pred CCeEEEeCCCcCHHHHHHHhc------------C---C-CEEEEEECC
Confidence 469999999999999875221 0 1 478888874
No 199
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.73 E-value=0.0031 Score=60.82 Aligned_cols=35 Identities=6% Similarity=-0.085 Sum_probs=25.9
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
+++.+|+|+|||+|..+..+... .|..+|+..|+-
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~---------------~~~~~v~~vDis 149 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKY---------------KSVENIDICEID 149 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTC---------------TTCCEEEEEESC
T ss_pred CCCCEEEEEcCCccHHHHHHHHc---------------CCCCEEEEEECC
Confidence 35689999999999988876211 144788888874
No 200
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.71 E-value=0.0022 Score=61.45 Aligned_cols=116 Identities=15% Similarity=0.109 Sum_probs=61.2
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhcc-CcchHHHhhhhcCCCCCCc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKS-LPSFYERLKTERGHDDFGS 139 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~-l~~~~~~~~~~~~~~~~~~ 139 (380)
+++.+|+|+|||+|..+..+... .+..+|+..|+-. +.-.+.+. ++.....+. . . +-
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~---------------~~~~~v~~vDid~-~~i~~ar~~~~~~~~~~~---~-~--rv 151 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKH---------------PSVESVVQCEIDE-DVIQVSKKFLPGMAIGYS---S-S--KL 151 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC---------------TTCCEEEEEESCH-HHHHHHHHHCHHHHGGGG---C-T--TE
T ss_pred CCCCEEEEECCCchHHHHHHHHc---------------CCCCEEEEEECCH-HHHHHHHHHhHHhhcccC---C-C--cE
Confidence 45689999999999988877211 1447888888732 11111111 110000000 0 0 11
Q ss_pred ceeeccCCCcccCC-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRL-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 140 ~f~~~vpgSFy~~l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
.+ +-++...-+ .+++++|+|++....+|- |.. . -....|
T Consensus 152 ~v---~~~Da~~~l~~~~~~fD~Ii~d~~~~~~---~~~---------------------------~-------l~~~~~ 191 (304)
T 2o07_A 152 TL---HVGDGFEFMKQNQDAFDVIITDSSDPMG---PAE---------------------------S-------LFKESY 191 (304)
T ss_dssp EE---EESCHHHHHHTCSSCEEEEEEECC------------------------------------------------CHH
T ss_pred EE---EECcHHHHHhhCCCCceEEEECCCCCCC---cch---------------------------h-------hhHHHH
Confidence 22 224543311 246889999986544431 110 0 011245
Q ss_pred HHHHHHHhccCceEEEEecc
Q 044727 219 LKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g 238 (380)
++.-.+.|+|||++++....
T Consensus 192 l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 192 YQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHhccCCCeEEEEecCC
Confidence 77778999999999998754
No 201
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.69 E-value=0.00052 Score=59.34 Aligned_cols=33 Identities=15% Similarity=-0.073 Sum_probs=24.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..++.++. . +..+|+..|+-
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~--------~--------~~~~v~~vD~~ 76 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS--------R--------GMDKSICIEKN 76 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH--------T--------TCSEEEEEESC
T ss_pred CCCCEEEeCCccCHHHHHHHH--------c--------CCCEEEEEECC
Confidence 357999999999999887632 1 23688888873
No 202
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.69 E-value=0.00085 Score=61.09 Aligned_cols=33 Identities=6% Similarity=-0.163 Sum_probs=25.7
Q ss_pred eEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 64 IRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 64 ~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
.+|+|+|||+|..|+.+...+ ++..+|+..|+-
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~ 90 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGL--------------ADNTTLTCIDPE 90 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHS--------------CTTSEEEEECSC
T ss_pred CCEEEEcCCchHHHHHHHHhC--------------CCCCEEEEEECC
Confidence 499999999999999884432 135789999983
No 203
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.69 E-value=0.0032 Score=64.20 Aligned_cols=129 Identities=9% Similarity=0.044 Sum_probs=71.2
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..|+.+.+.+ .+..+|+.+|+-..=. ......++ ..| ..++
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~--------------~~~g~V~avDis~~~l-------~~~~~n~~-r~g---~~nv-- 170 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARM--------------NNEGAILANEFSASRV-------KVLHANIS-RCG---ISNV-- 170 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHT--------------TTCSEEEEECSSHHHH-------HHHHHHHH-HHT---CCSE--
T ss_pred CCEEEEeCCCCCHHHHHHHHhC--------------CCCCEEEEEECCHHHH-------HHHHHHHH-HcC---CCcE--
Confidence 4799999999999999884432 1247899999843111 01111111 112 1221
Q ss_pred eccCCCcccCCC-CCCccceEEc---ccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLF-PPCFLNLVYS---SFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 143 ~~vpgSFy~~l~-p~~svdl~~S---s~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
..+-++...-.. +++++|.|++ .+...-+.+.|..... | .++. .....+.-..+
T Consensus 171 ~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~------~------------~~~~----~~~l~~~q~~i 228 (479)
T 2frx_A 171 ALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKN------W------------SPES----NQEIAATQREL 228 (479)
T ss_dssp EEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSS------C------------CHHH----HHHHHHHHHHH
T ss_pred EEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhh------c------------CHhH----HHHHHHHHHHH
Confidence 113345432221 4578999987 3344444444442111 1 1211 12223333567
Q ss_pred HHHHHHHhccCceEEEEeccCC
Q 044727 219 LKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
|..-.+-|||||+|+.++..-.
T Consensus 229 L~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 229 IDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp HHHHHHHEEEEEEEEEEESCCS
T ss_pred HHHHHHhcCCCCEEEEecccCC
Confidence 8888899999999999987654
No 204
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.66 E-value=0.0043 Score=58.46 Aligned_cols=22 Identities=18% Similarity=0.289 Sum_probs=17.8
Q ss_pred HHHHHHHHHhccCceEEEEecc
Q 044727 217 SFLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g 238 (380)
.|++.-.+.|+|||++++....
T Consensus 174 ~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 174 EFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEcCC
Confidence 4577778999999999998644
No 205
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.65 E-value=0.0016 Score=60.91 Aligned_cols=80 Identities=16% Similarity=0.113 Sum_probs=52.1
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDF 137 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~ 137 (380)
+.+-+|+|+|||+|+.++..+ +...+...|+-. .....+.. ..| .
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~------------------~~~~y~a~DId~-----------~~i~~ar~~~~~~g---~ 151 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER------------------GIASVWGCDIHQ-----------GLGDVITPFAREKD---W 151 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT------------------TCSEEEEEESBH-----------HHHHHHHHHHHHTT---C
T ss_pred CCCCeEEEecCCccHHHHHhc------------------cCCeEEEEeCCH-----------HHHHHHHHHHHhcC---C
Confidence 457899999999999998872 358888888842 11111111 111 1
Q ss_pred CcceeeccCCCcccCCCCCCccceEEcccccccccCCCc
Q 044727 138 GSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPK 176 (380)
Q Consensus 138 ~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~ 176 (380)
+-.|.. +++.....| .+.|++.+.-++|-|.+-..
T Consensus 152 ~~~~~v---~D~~~~~~~-~~~DvvLllk~lh~LE~q~~ 186 (253)
T 3frh_A 152 DFTFAL---QDVLCAPPA-EAGDLALIFKLLPLLEREQA 186 (253)
T ss_dssp EEEEEE---CCTTTSCCC-CBCSEEEEESCHHHHHHHST
T ss_pred CceEEE---eecccCCCC-CCcchHHHHHHHHHhhhhch
Confidence 223322 566566644 49999999999999877544
No 206
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.64 E-value=0.0019 Score=59.58 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=27.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPG 111 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~ 111 (380)
++.+|+|+|||+|..|+.+...+ ++..+|+..|+-.
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~--------------~~~~~v~~iD~~~ 95 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLAL--------------PDDGQVITCDINE 95 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTS--------------CTTCEEEEEECCC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhC--------------CCCCEEEEEECCH
Confidence 35799999999999999874332 1257889889843
No 207
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.64 E-value=0.001 Score=62.40 Aligned_cols=125 Identities=7% Similarity=0.020 Sum_probs=65.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..|..+.... +...+|+..|+... . +.......+ ..| ..++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~--------------~~~~~v~avD~~~~---~----l~~~~~~~~-~~g---~~~v-- 136 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLM--------------KNKGTIVAVEISKT---R----TKALKSNIN-RMG---VLNT-- 136 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHT--------------TTCSEEEEEESCHH---H----HHHHHHHHH-HTT---CCSE--
T ss_pred cCEEEEeCCCccHHHHHHHHHc--------------CCCCEEEEECCCHH---H----HHHHHHHHH-HhC---CCcE--
Confidence 4699999999999998874332 02378999998420 0 000011111 112 1121
Q ss_pred eccCCCcccCCC----CCCccceEEcc---cccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRLF----PPCFLNLVYSS---FCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDF 215 (380)
Q Consensus 143 ~~vpgSFy~~l~----p~~svdl~~Ss---~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~ 215 (380)
..+-+++..... +.+++|++++. +.+..+.+.|. | ...-.....++.
T Consensus 137 ~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~----------~----------------~~~~~~~~~~~~ 190 (274)
T 3ajd_A 137 IIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRN----------V----------------SEEDIKYCSLRQ 190 (274)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEEEECCC--------------------------------------HHHHTGGGTCH
T ss_pred EEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCC----------C----------------CHHHHHHHHHHH
Confidence 113355543322 26789998763 12222222220 0 001111223455
Q ss_pred HHHHHHHHHHhccCceEEEEeccCC
Q 044727 216 TSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
..+|+.-.+.|+|||+|++++....
T Consensus 191 ~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 191 KELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred HHHHHHHHHhCCCCCEEEEEECCCC
Confidence 6788888999999999999987654
No 208
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.63 E-value=0.0021 Score=61.20 Aligned_cols=35 Identities=14% Similarity=0.141 Sum_probs=25.9
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
+++.+|+|+|||+|..+..+... .+..+|+..|+-
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~---------------~~~~~v~~vDid 123 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKH---------------DSVEKAILCEVD 123 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTS---------------TTCSEEEEEESC
T ss_pred CCCCEEEEEcCCcCHHHHHHHhc---------------CCCCEEEEEECC
Confidence 35689999999999988877221 134788888873
No 209
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.62 E-value=0.00074 Score=60.79 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=26.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
++.+|+|+|||+|..|+.+...+ ++..+|+..|+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~ 92 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLL--------------QPGARLLTMEIN 92 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhC--------------CCCCEEEEEeCC
Confidence 35799999999999998873321 135788888873
No 210
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.59 E-value=0.0052 Score=59.56 Aligned_cols=112 Identities=14% Similarity=-0.019 Sum_probs=68.2
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
..+|+|+|||+|..++.+.... .|...++..|.-. ......+. ..|.. .-
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~--------------~~~~~v~g~Di~~-----------~~i~~a~~n~~~~g~~--~i 256 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTL--------------GPTSPVYAGDLDE-----------KRLGLAREAALASGLS--WI 256 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHH--------------CTTSCEEEEESCH-----------HHHHHHHHHHHHTTCT--TC
T ss_pred CCEEEeCCCCcCHHHHHHHHhh--------------CCCceEEEEECCH-----------HHHHHHHHHHHHcCCC--ce
Confidence 4799999999999888773322 0347888999832 11111111 12201 12
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFL 219 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL 219 (380)
.| +-+++.+-..|..++|++++.--.+|.. .+ .. ........++
T Consensus 257 ~~---~~~D~~~~~~~~~~~D~Ii~npPyg~r~------~~-------------------~~--------~~~~~~~~~~ 300 (354)
T 3tma_A 257 RF---LRADARHLPRFFPEVDRILANPPHGLRL------GR-------------------KE--------GLFHLYWDFL 300 (354)
T ss_dssp EE---EECCGGGGGGTCCCCSEEEECCCSCC-----------------------------CH--------HHHHHHHHHH
T ss_pred EE---EeCChhhCccccCCCCEEEECCCCcCcc------CC-------------------cc--------cHHHHHHHHH
Confidence 34 4478877667777889998753333210 00 11 2233456678
Q ss_pred HHHHHHhccCceEEEEec
Q 044727 220 KFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 220 ~~Ra~eL~pgG~l~~~~~ 237 (380)
+.-.+.|+|||++++.+.
T Consensus 301 ~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 301 RGALALLPPGGRVALLTL 318 (354)
T ss_dssp HHHHHTSCTTCEEEEEES
T ss_pred HHHHHhcCCCcEEEEEeC
Confidence 888899999999999875
No 211
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.58 E-value=0.0016 Score=63.32 Aligned_cols=114 Identities=17% Similarity=0.063 Sum_probs=62.8
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhcc-CcchHHHhhhhcCCCCCCc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKS-LPSFYERLKTERGHDDFGS 139 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~-l~~~~~~~~~~~~~~~~~~ 139 (380)
+++.+|+|+|||+|..+..+... .|..+|+..|+-. +.-.+.+. ++... .+....+-
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~---------------~~~~~V~~VDis~-~~l~~Ar~~~~~~~------~gl~~~rv 176 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARH---------------ASIEQIDMCEIDK-MVVDVSKQFFPDVA------IGYEDPRV 176 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTC---------------TTCCEEEEEESCH-HHHHHHHHHCHHHH------GGGGSTTE
T ss_pred CCCCEEEEECCCccHHHHHHHHc---------------CCCCEEEEEECCH-HHHHHHHHHHHhhc------cccCCCcE
Confidence 45689999999999988776211 1457888888742 11111111 11000 00000011
Q ss_pred ceeeccCCCcccCC--CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRL--FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 140 ~f~~~vpgSFy~~l--~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
-+ +-|+...-+ ++++++|+|++....+|. .+..+ ....
T Consensus 177 ~~---~~~D~~~~l~~~~~~~fDlIi~d~~~p~~--~~~~l-----------------------------------~~~~ 216 (334)
T 1xj5_A 177 NL---VIGDGVAFLKNAAEGSYDAVIVDSSDPIG--PAKEL-----------------------------------FEKP 216 (334)
T ss_dssp EE---EESCHHHHHHTSCTTCEEEEEECCCCTTS--GGGGG-----------------------------------GSHH
T ss_pred EE---EECCHHHHHHhccCCCccEEEECCCCccC--cchhh-----------------------------------hHHH
Confidence 23 335654322 356899999986543331 00100 0134
Q ss_pred HHHHHHHHhccCceEEEEe
Q 044727 218 FLKFRSEELKTEGRMVLNF 236 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~ 236 (380)
|++.-.+.|+|||+|++..
T Consensus 217 ~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 217 FFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCcEEEEec
Confidence 5777789999999999974
No 212
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.58 E-value=0.0047 Score=60.75 Aligned_cols=113 Identities=15% Similarity=0.046 Sum_probs=67.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~ 139 (380)
..+|+|+|||+|..|+.+... ..+|+..|+.. ......+. .++ ..+
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-----------------~~~v~~vD~s~-----------~~~~~a~~n~~~n~---~~~ 258 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-----------------FREVVAVDSSA-----------EALRRAEENARLNG---LGN 258 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-----------------EEEEEEEESCH-----------HHHHHHHHHHHHTT---CTT
T ss_pred CCeEEEeeeccCHHHHHHHHh-----------------CCEEEEEECCH-----------HHHHHHHHHHHHcC---CCC
Confidence 579999999999999888332 15778888732 11111111 112 122
Q ss_pred ceeeccCCCcccCCC----CCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRLF----PPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDF 215 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~----p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~ 215 (380)
+..+.++..+-+. +..++|++++ +.|....+ +..+ ....+++
T Consensus 259 --~~~~~~d~~~~~~~~~~~~~~fD~Ii~--------dpP~~~~~-------------------~~~~-----~~~~~~~ 304 (382)
T 1wxx_A 259 --VRVLEANAFDLLRRLEKEGERFDLVVL--------DPPAFAKG-------------------KKDV-----ERAYRAY 304 (382)
T ss_dssp --EEEEESCHHHHHHHHHHTTCCEEEEEE--------CCCCSCCS-------------------TTSH-----HHHHHHH
T ss_pred --ceEEECCHHHHHHHHHhcCCCeeEEEE--------CCCCCCCC-------------------hhHH-----HHHHHHH
Confidence 1223466544322 1568899885 33432111 1111 3445788
Q ss_pred HHHHHHHHHHhccCceEEEEeccCC
Q 044727 216 TSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 216 ~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
..+|..-.+.|+|||.++++.....
T Consensus 305 ~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 305 KEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCCCEEEEEECCCC
Confidence 8899999999999999999986544
No 213
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.56 E-value=0.0047 Score=56.11 Aligned_cols=20 Identities=15% Similarity=0.238 Sum_probs=17.4
Q ss_pred ceEEEeecCCCCccchHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTL 82 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~ 82 (380)
+.+|+|+|||+|..++.+..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~ 80 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFAS 80 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHH
Confidence 57999999999999998744
No 214
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.55 E-value=0.0064 Score=57.18 Aligned_cols=116 Identities=18% Similarity=0.094 Sum_probs=62.6
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhcc-CcchHHHhhhhcCCCCCCc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKS-LPSFYERLKTERGHDDFGS 139 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~-l~~~~~~~~~~~~~~~~~~ 139 (380)
+++.+|+|+|||+|..+..++.. .+..+|...|+-. +.-.+.+. ++.. . .+....+-
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~---------------~~~~~v~~vEid~-~~v~~ar~~~~~~----~--~~~~~~rv 131 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKH---------------PSVKKATLVDIDG-KVIEYSKKFLPSI----A--GKLDDPRV 131 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTC---------------TTCSEEEEEESCH-HHHHHHHHHCHHH----H--TTTTSTTE
T ss_pred CCCCEEEEECCchHHHHHHHHhC---------------CCCceEEEEECCH-HHHHHHHHHhHhh----c--cccCCCce
Confidence 45789999999999887766211 1346788888732 11111111 1100 0 00000011
Q ss_pred ceeeccCCCcccCC-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRL-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 140 ~f~~~vpgSFy~~l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
-+ +-|+...-+ .+++++|++++....+|. .|..+.. ..|
T Consensus 132 ~v---~~~D~~~~l~~~~~~fD~Ii~d~~~~~~--~~~~l~~-----------------------------------~~~ 171 (275)
T 1iy9_A 132 DV---QVDDGFMHIAKSENQYDVIMVDSTEPVG--PAVNLFT-----------------------------------KGF 171 (275)
T ss_dssp EE---EESCSHHHHHTCCSCEEEEEESCSSCCS--CCCCCST-----------------------------------THH
T ss_pred EE---EECcHHHHHhhCCCCeeEEEECCCCCCC--cchhhhH-----------------------------------HHH
Confidence 22 234543322 246789999996655552 1111110 124
Q ss_pred HHHHHHHhccCceEEEEecc
Q 044727 219 LKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g 238 (380)
++.-.+.|+|||++++....
T Consensus 172 ~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 172 YAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp HHHHHHHEEEEEEEEEECCC
T ss_pred HHHHHHhcCCCcEEEEEcCC
Confidence 66667899999999998643
No 215
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.52 E-value=0.0033 Score=59.40 Aligned_cols=35 Identities=6% Similarity=-0.075 Sum_probs=25.7
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
+++.+|+|+|||+|..+..+.. . .|..++...|+-
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vDid 111 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCK--------Y-------KSVENIDICEID 111 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTT--------C-------TTCCEEEEEESC
T ss_pred CCCCeEEEEeCCcCHHHHHHHH--------c-------CCCCEEEEEECC
Confidence 4568999999999998877621 1 134688888873
No 216
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.50 E-value=0.0033 Score=63.91 Aligned_cols=128 Identities=12% Similarity=0.057 Sum_probs=71.0
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..|+.+.+.+ +...+|+.+|+-..- +......+ ...| - . +
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~--------------~~~g~V~AvDis~~~-------l~~a~~n~-~r~G-~--~---v 153 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARM--------------GGKGLLLANEVDGKR-------VRGLLENV-ERWG-A--P---L 153 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT--------------TTCSEEEEECSCHHH-------HHHHHHHH-HHHC-C--C---C
T ss_pred CCEEEEEcCCcCHHHHHHHHhC--------------CCCCEEEEEECCHHH-------HHHHHHHH-HHcC-C--e---E
Confidence 4799999999999999884433 123689999984310 00000101 1112 1 1 2
Q ss_pred eccCCCcccCC-CCCCccceEEc---ccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 143 AAAPGSFHGRL-FPPCFLNLVYS---SFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 143 ~~vpgSFy~~l-~p~~svdl~~S---s~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
..+-++...-. ++++++|.|++ .+..--+.+.|..... | + +..+ ....+.-..+
T Consensus 154 ~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~------~----------~-~~~~-----~~l~~~Q~~i 211 (464)
T 3m6w_A 154 AVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARH------W----------G-PSAP-----KRMAEVQKAL 211 (464)
T ss_dssp EEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGG------C----------C-TTHH-----HHHHHHHHHH
T ss_pred EEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhh------c----------C-HHHH-----HHHHHHHHHH
Confidence 22345553322 24678999984 2222223333432211 0 0 2222 2223344667
Q ss_pred HHHHHHHhccCceEEEEeccCC
Q 044727 219 LKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
|..-.+-|||||+|+.++..-.
T Consensus 212 L~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 212 LAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp HHHHHTTEEEEEEEEEEESCCC
T ss_pred HHHHHHhcCCCcEEEEEeccCc
Confidence 8888999999999999887654
No 217
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.40 E-value=0.018 Score=51.98 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=40.9
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..++.+... ..+++..|+.. +.-...+ .... ..+.. ..-.+
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~-----------------~~~v~~vD~~~-~~~~~a~------~~~~-~~~~~-~~~~~- 144 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV-----------------AGEVWTFEAVE-EFYKTAQ------KNLK-KFNLG-KNVKF- 144 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-----------------SSEEEEECSCH-HHHHHHH------HHHH-HTTCC-TTEEE-
T ss_pred CCEEEEeCCCccHHHHHHHHh-----------------CCEEEEEecCH-HHHHHHH------HHHH-HcCCC-CcEEE-
Confidence 479999999999988877332 15788888732 0000000 0000 01100 01122
Q ss_pred eccCCCcccCCCCCCccceEEc
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYS 164 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~S 164 (380)
+.+++.+.+++++++|++++
T Consensus 145 --~~~d~~~~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 145 --FNVDFKDAEVPEGIFHAAFV 164 (248)
T ss_dssp --ECSCTTTSCCCTTCBSEEEE
T ss_pred --EEcChhhcccCCCcccEEEE
Confidence 45777654447889999997
No 218
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.36 E-value=0.00087 Score=60.08 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=25.9
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
+.+|+|+|||+|..|+.+...+ ++..+|+..|..
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~ 98 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLAL--------------PKDGTLITCDVD 98 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTC--------------CTTCEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHhC--------------CCCCEEEEEeCC
Confidence 5699999999999998873322 125788988873
No 219
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.34 E-value=0.0006 Score=61.14 Aligned_cols=35 Identities=6% Similarity=0.005 Sum_probs=26.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
.+.+|+|+|||+|..|+.+...+ ++..+|+..|+-
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~ 92 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGL--------------SSGGRVVTLEAS 92 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTC--------------CSSCEEEEEESC
T ss_pred CCCEEEEecCCccHHHHHHHHhC--------------CCCCEEEEEECC
Confidence 35799999999999998873321 125789999973
No 220
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.27 E-value=0.0071 Score=58.59 Aligned_cols=29 Identities=10% Similarity=-0.121 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHhccCceEEEEeccCC
Q 044727 212 EIDFTSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 212 ~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
.+|+..+|+.-.+.|+|||.+++......
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 35677788888999999999888876554
No 221
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.27 E-value=0.0072 Score=61.59 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=42.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
+..+|+|+|||+|..++.+. +. +..+|+..|+. .. ..... ... ..++.. ..-.|
T Consensus 158 ~~~~VLDiGcGtG~la~~la--------~~--------~~~~V~gvD~s--~~---l~~A~---~~~-~~~gl~-~~v~~ 211 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAS--TM---AQHAE---VLV-KSNNLT-DRIVV 211 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHH--------HT--------TCSEEEEEECH--HH---HHHHH---HHH-HHTTCT-TTEEE
T ss_pred CCCEEEEecCcccHHHHHHH--------Hc--------CCCEEEEEEcH--HH---HHHHH---HHH-HHcCCC-CcEEE
Confidence 34799999999999776551 11 34689999973 11 11110 001 111200 01233
Q ss_pred eeccCCCcccCCCCCCccceEEccccc
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCL 168 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~al 168 (380)
+.|++.+-.+| .++|+++|...+
T Consensus 212 ---~~~d~~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 212 ---IPGKVEEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp ---EESCTTTCCCS-SCEEEEECCCCH
T ss_pred ---EECchhhCccC-CCeEEEEEeCch
Confidence 44777553444 689999997653
No 222
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.25 E-value=0.0068 Score=58.32 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=26.1
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
+++.+|+|+|||+|..+..++.. .|..+|...|+-
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~---------------~~~~~v~~vDid 141 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKH---------------ESVEKVTMCEID 141 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTC---------------TTCCEEEEECSC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHc---------------CCCCEEEEEECC
Confidence 35689999999999988876211 145788888873
No 223
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.17 E-value=0.02 Score=55.18 Aligned_cols=128 Identities=9% Similarity=-0.052 Sum_probs=69.4
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|.|||+|..++.+...+ .... ....+++..|+ |+...-..... +. ..| . ...+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~----~~~~------~~~~~v~GiDi--~~~~~~~a~~n-----~~-~~g-~--~~~i 188 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQL----ELKG------DVDVHASGVDV--DDLLISLALVG-----AD-LQR-Q--KMTL 188 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHH----HTTS------SCEEEEEEEES--CHHHHHHHHHH-----HH-HHT-C--CCEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHH----HHhc------CCCceEEEEEC--CHHHHHHHHHH-----HH-hCC-C--CceE
Confidence 46899999999999988875554 1100 12378999998 32221111000 00 011 1 1122
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHH-HHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDF-TSFLK 220 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~-~~FL~ 220 (380)
+.|++... .+...+|++++.--+++.... . ... .-.+...+|. .|. ..|+.
T Consensus 189 ---~~~D~l~~-~~~~~fD~Ii~NPPfg~~~~~-~-~~~-~~~~~~~~g~---------------------~~~~~~~l~ 240 (344)
T 2f8l_A 189 ---LHQDGLAN-LLVDPVDVVISDLPVGYYPDD-E-NAK-TFELCREEGH---------------------SFAHFLFIE 240 (344)
T ss_dssp ---EESCTTSC-CCCCCEEEEEEECCCSEESCH-H-HHT-TSTTCCSSSC---------------------EEHHHHHHH
T ss_pred ---EECCCCCc-cccCCccEEEECCCCCCcCch-h-hhh-hccccCCCCc---------------------chHHHHHHH
Confidence 33565443 356889999998777664321 0 000 0000000110 022 24677
Q ss_pred HHHHHhccCceEEEEecc
Q 044727 221 FRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 221 ~Ra~eL~pgG~l~~~~~g 238 (380)
.-.+-|+|||++++.+..
T Consensus 241 ~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 241 QGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp HHHHTEEEEEEEEEEEEG
T ss_pred HHHHHhCCCCEEEEEECc
Confidence 778899999999999854
No 224
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.11 E-value=0.0092 Score=55.85 Aligned_cols=33 Identities=9% Similarity=-0.128 Sum_probs=25.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDL 109 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDL 109 (380)
...+|+|+|||+|..|+.+.... +..+|+..|+
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~---------------~~~~V~~vD~ 151 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS---------------KPKLVYAIEK 151 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT---------------CCSEEEEEEC
T ss_pred CCCEEEEecCcCCHHHHHHHHhC---------------CCCEEEEEeC
Confidence 34799999999999999883321 3468899997
No 225
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.11 E-value=0.0099 Score=59.04 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHH
Q 044727 209 DQFEIDFTSFLKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLN 255 (380)
Q Consensus 209 ~Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~ 255 (380)
....+|+..++..-.+-|+|||+|++.............+.+.+++.
T Consensus 299 ~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~ 345 (393)
T 4dmg_A 299 PAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAA 345 (393)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 34567888899999999999999997776554332123344444444
No 226
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=95.91 E-value=0.0056 Score=56.51 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=26.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
++.+|+|+|||+|..|+.+...+ ++..+|+..|..
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~--------------~~~~~v~~iD~s 113 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAI--------------PEDGKILAMDIN 113 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHS--------------CTTCEEEEEESC
T ss_pred CcCEEEEeCCCcCHHHHHHHHhC--------------CCCCEEEEEECC
Confidence 45799999999999999874432 125788998974
No 227
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=95.90 E-value=0.0027 Score=56.43 Aligned_cols=35 Identities=9% Similarity=-0.080 Sum_probs=25.7
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
++.+|+|+|||+|..|+.+...+ ++..+|+..|+.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~ 90 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAI--------------SISSRVVMIDPD 90 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTS--------------CTTCEEEEEESC
T ss_pred CCCEEEEEcCCccHHHHHHHHhC--------------CCCCEEEEEECC
Confidence 35799999999999998873321 124788888873
No 228
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.79 E-value=0.05 Score=53.31 Aligned_cols=121 Identities=16% Similarity=0.092 Sum_probs=66.8
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..++.+.+.. .+..+++..|+-..=. .+.. ...+
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~--------------~~~~~i~gvDi~~~~~-----~~a~--------------~~~~- 85 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAH--------------GTAYRFVGVEIDPKAL-----DLPP--------------WAEG- 85 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHH--------------CSCSEEEEEESCTTTC-----CCCT--------------TEEE-
T ss_pred CCEEEECCCCChHHHHHHHHHh--------------CCCCeEEEEECCHHHH-----HhCC--------------CCcE-
Confidence 4699999999998888774432 0347888888743000 0000 1112
Q ss_pred eccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHH------HHHHH
Q 044727 143 AAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQF------EIDFT 216 (380)
Q Consensus 143 ~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~------~~D~~ 216 (380)
+-+++.. ..+..++|++++. |+...... ++++..+ . +++..+.|...+ ...+.
T Consensus 86 --~~~D~~~-~~~~~~fD~Ii~N---------PPy~~~~~------~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~ 144 (421)
T 2ih2_A 86 --ILADFLL-WEPGEAFDLILGN---------PPYGIVGE------ASKYPIH--V-FKAVKDLYKKAFSTWKGKYNLYG 144 (421)
T ss_dssp --EESCGGG-CCCSSCEEEEEEC---------CCCCCBSC------TTTCSBC--C-CHHHHHHHHHHCTTCCTTCCHHH
T ss_pred --EeCChhh-cCccCCCCEEEEC---------cCccCccc------ccccccc--c-CHHHHHHHHHhhhcccCCccHHH
Confidence 3366644 3456789999984 32221100 0000000 0 233433333211 01345
Q ss_pred HHHHHHHHHhccCceEEEEecc
Q 044727 217 SFLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g 238 (380)
.||+.-.+-|+|||++++.+..
T Consensus 145 ~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 145 AFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHhCCCCEEEEEECh
Confidence 7899889999999999999874
No 229
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=95.78 E-value=0.0065 Score=61.62 Aligned_cols=129 Identities=11% Similarity=0.038 Sum_probs=69.6
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCccee
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFI 142 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 142 (380)
..+|+|+|||+|..|+.+.+.+ ....+|+.+|+-..- +......+. ..| ..++
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~--------------~~~g~V~AvDis~~r-------l~~~~~n~~-r~g---~~nv-- 158 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQM--------------KGKGLLVTNEIFPKR-------AKILSENIE-RWG---VSNA-- 158 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHH--------------TTCSEEEEECSSHHH-------HHHHHHHHH-HHT---CSSE--
T ss_pred CCEEEEECCCcCHHHHHHHHHc--------------CCCCEEEEEeCCHHH-------HHHHHHHHH-HcC---CCce--
Confidence 4799999999999999885543 024689999984310 111111111 112 1222
Q ss_pred eccCCCcccCC-CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHH----HHHHHHHHHHH
Q 044727 143 AAAPGSFHGRL-FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKA----YLDQFEIDFTS 217 (380)
Q Consensus 143 ~~vpgSFy~~l-~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~a----y~~Q~~~D~~~ 217 (380)
..+-++...-. .+++++|.|++ +.|+.-.. .+.+ .|++... ........-..
T Consensus 159 ~v~~~Da~~l~~~~~~~FD~Il~--------DaPCSg~G-----~~rr----------~p~~~~~~~~~~~~~l~~~Q~~ 215 (456)
T 3m4x_A 159 IVTNHAPAELVPHFSGFFDRIVV--------DAPCSGEG-----MFRK----------DPNAIKEWTEESPLYCQKRQQE 215 (456)
T ss_dssp EEECCCHHHHHHHHTTCEEEEEE--------ECCCCCGG-----GTTT----------CHHHHHHCCTTHHHHHHHHHHH
T ss_pred EEEeCCHHHhhhhccccCCEEEE--------CCCCCCcc-----cccc----------CHHHhhhcCHHHHHHHHHHHHH
Confidence 11334442211 23578999975 34432111 0000 1222110 11233344457
Q ss_pred HHHHHHHHhccCceEEEEeccCCC
Q 044727 218 FLKFRSEELKTEGRMVLNFIGNDK 241 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~~ 241 (380)
+|..=.+-|+|||+|+.++..-.+
T Consensus 216 iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 216 ILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp HHHHHHHTEEEEEEEEEEESCCCG
T ss_pred HHHHHHHhcCCCcEEEEEEeeccc
Confidence 888889999999999998876553
No 230
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.69 E-value=0.024 Score=53.50 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=24.9
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..++.+... |..+|+..|+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~----------------~~~~v~~vDis 155 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF----------------SDAIVFATDVS 155 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH----------------SSCEEEEEESC
T ss_pred CCEEEEEeCchhHHHHHHHHC----------------CCCEEEEEECC
Confidence 368999999999998877221 34789999984
No 231
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.49 E-value=0.0051 Score=56.26 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=26.3
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDL 109 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDL 109 (380)
++.+|+|+|||+|..|+.+...+ ++..+++..|+
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~--------------~~~~~v~~iD~ 103 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSI--------------PDDGKITAIDF 103 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHS--------------CTTCEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC--------------CCCCEEEEEEC
Confidence 45799999999999999884432 12578888887
No 232
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=95.49 E-value=0.029 Score=52.16 Aligned_cols=102 Identities=10% Similarity=0.057 Sum_probs=61.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+... . |..+|+..|+-. ......+. .+|. .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~--------~-------~~~~V~avDi~~-----------~al~~A~~N~~~~gl---~ 71 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKN--------Q-------TASFAIAGEVVD-----------GPFQSAQKQVRSSGL---T 71 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHT--------T-------SEEEEEEEESSH-----------HHHHHHHHHHHHTTC---T
T ss_pred CCCEEEEECCccHHHHHHHHHh--------C-------CCCEEEEEECCH-----------HHHHHHHHHHHHcCC---C
Confidence 3489999999999999988322 1 556899999842 11111211 1221 1
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
+ -+..+-|+.++.+.|...+|++++. . .. . .-+..+
T Consensus 72 ~-~I~v~~gD~l~~~~~~~~~D~Ivia-----------g-------------------mG--g-----------~lI~~I 107 (244)
T 3gnl_A 72 E-QIDVRKGNGLAVIEKKDAIDTIVIA-----------G-------------------MG--G-----------TLIRTI 107 (244)
T ss_dssp T-TEEEEECSGGGGCCGGGCCCEEEEE-----------E-------------------EC--H-----------HHHHHH
T ss_pred c-eEEEEecchhhccCccccccEEEEe-----------C-------------------Cc--h-----------HHHHHH
Confidence 1 1122447777777665568887752 1 11 0 124456
Q ss_pred HHHHHHHhccCceEEEEe
Q 044727 219 LKFRSEELKTEGRMVLNF 236 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~ 236 (380)
|.....-|+++|+|+++-
T Consensus 108 L~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 108 LEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp HHHTGGGGTTCCEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEc
Confidence 777788889999998875
No 233
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.38 E-value=0.028 Score=55.37 Aligned_cols=31 Identities=10% Similarity=-0.121 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHhccCceEEEEeccCC
Q 044727 210 QFEIDFTSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 210 Q~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
...+++..+|..-.+.|+|||.++++.....
T Consensus 309 ~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 309 AGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 3457888899999999999999998887554
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.27 E-value=0.01 Score=56.01 Aligned_cols=81 Identities=10% Similarity=0.037 Sum_probs=47.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCC--Cc
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDF--GS 139 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~--~~ 139 (380)
...+|+|+|||+|..|..+... ..+|+.-|+-. .....++........ .-
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~-----------------~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~v 79 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK-----------------AKKVVACELDP-----------RLVAELHKRVQGTPVASKL 79 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH-----------------SSEEEEEESCH-----------HHHHHHHHHHTTSTTGGGE
T ss_pred CCCEEEEEcCcccHHHHHHHhh-----------------CCEEEEEECCH-----------HHHHHHHHHHHhcCCCCce
Confidence 3579999999999999988432 14677777632 111111111000000 11
Q ss_pred ceeeccCCCcccCCCCCCccceEEcccccccccCCC
Q 044727 140 CFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMP 175 (380)
Q Consensus 140 ~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P 175 (380)
.+ +-|++..-.+| ++|.++++...||.+.+-
T Consensus 80 ~~---~~~D~~~~~~~--~fD~vv~nlpy~~~~~~~ 110 (285)
T 1zq9_A 80 QV---LVGDVLKTDLP--FFDTCVANLPYQISSPFV 110 (285)
T ss_dssp EE---EESCTTTSCCC--CCSEEEEECCGGGHHHHH
T ss_pred EE---EEcceecccch--hhcEEEEecCcccchHHH
Confidence 23 44777554444 799999999998876543
No 235
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.24 E-value=0.059 Score=49.44 Aligned_cols=34 Identities=12% Similarity=0.040 Sum_probs=26.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||||..++.+... . |..+|+..|.-
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~--------~-------~~~~V~avDi~ 48 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVER--------G-------QIKSAIAGEVV 48 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHT--------T-------SEEEEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHHHh--------C-------CCCEEEEEECC
Confidence 3479999999999999988322 1 55789999983
No 236
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=95.23 E-value=0.085 Score=49.18 Aligned_cols=20 Identities=15% Similarity=0.029 Sum_probs=17.1
Q ss_pred HHHHHHHHhccCceEEEEec
Q 044727 218 FLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~ 237 (380)
|++.-.+.|+|||+|++...
T Consensus 153 ~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEcC
Confidence 67788999999999999753
No 237
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=95.12 E-value=0.051 Score=50.08 Aligned_cols=102 Identities=13% Similarity=0.012 Sum_probs=61.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||||..++.+... . |..+|+..|+-. ......+. .+|. .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~--------~-------~~~~V~AvDi~~-----------~al~~A~~N~~~~gl---~ 71 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQM--------G-------YCDFAIAGEVVN-----------GPYQSALKNVSEHGL---T 71 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHT--------T-------CEEEEEEEESSH-----------HHHHHHHHHHHHTTC---T
T ss_pred CCCEEEEECCchHHHHHHHHHh--------C-------CCCEEEEEECCH-----------HHHHHHHHHHHHcCC---C
Confidence 3589999999999999988322 1 556899999842 11111211 1221 1
Q ss_pred cceeeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSF 218 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~F 218 (380)
+ -+..+-|+..+-+.|...+|+++.. ... . .-...+
T Consensus 72 ~-~I~~~~gD~l~~~~~~~~~D~Ivia------------------------------GmG--g-----------~lI~~I 107 (230)
T 3lec_A 72 S-KIDVRLANGLSAFEEADNIDTITIC------------------------------GMG--G-----------RLIADI 107 (230)
T ss_dssp T-TEEEEECSGGGGCCGGGCCCEEEEE------------------------------EEC--H-----------HHHHHH
T ss_pred C-cEEEEECchhhccccccccCEEEEe------------------------------CCc--h-----------HHHHHH
Confidence 1 1122446776766665578877642 111 0 124456
Q ss_pred HHHHHHHhccCceEEEEe
Q 044727 219 LKFRSEELKTEGRMVLNF 236 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~ 236 (380)
|....+-|+++|+|+++-
T Consensus 108 L~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 108 LNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp HHHTGGGGTTCCEEEEEE
T ss_pred HHHHHHHhCcCCEEEEEC
Confidence 777777899999988875
No 238
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.09 E-value=0.0081 Score=53.75 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=25.9
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
++.+|+|+|||+|..++.+...+ ++..+|+..|+-
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~ 103 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALAL--------------PADGRVVTCEVD 103 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEESC
T ss_pred CCCEEEEEcCCccHHHHHHHHhC--------------CCCCEEEEEECC
Confidence 35799999999999998873321 124788888873
No 239
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=94.98 E-value=0.055 Score=47.28 Aligned_cols=75 Identities=12% Similarity=-0.020 Sum_probs=42.8
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..++.+. +. +.-+|+..|+-. ......+... . +-.|
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~--------~~--------~~~~v~~vD~~~-----------~~~~~a~~~~--~--~~~~ 99 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSY--------LL--------GAESVTAFDIDP-----------DAIETAKRNC--G--GVNF 99 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHH--------HT--------TBSEEEEEESCH-----------HHHHHHHHHC--T--TSEE
T ss_pred CCCEEEEEeCCccHHHHHHH--------Hc--------CCCEEEEEECCH-----------HHHHHHHHhc--C--CCEE
Confidence 45799999999999887762 11 224688888732 1111111111 0 1233
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccC
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSR 173 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~ 173 (380)
+.+++.. +| +++|++++.-.+||+.+
T Consensus 100 ---~~~d~~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 100 ---MVADVSE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp ---EECCGGG--CC-CCEEEEEECCCC-----
T ss_pred ---EECcHHH--CC-CCeeEEEECCCchhccC
Confidence 3466655 24 79999999999999654
No 240
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=94.85 E-value=0.025 Score=55.77 Aligned_cols=29 Identities=14% Similarity=0.259 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHhccCceEEEEeccCC
Q 044727 212 EIDFTSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 212 ~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
.+++..+++.-.+.|+|||.++++.....
T Consensus 307 ~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 307 SKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 45667778888899999999999986554
No 241
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=94.83 E-value=0.013 Score=53.15 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=25.3
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
+.+|+|+|||+|..|+.+...+ ++..+++..|..
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~iD~~ 106 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQL--------------PPDGQIIACDQD 106 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEESC
T ss_pred CCEEEEecCCCCHHHHHHHHhC--------------CCCCEEEEEECC
Confidence 5699999999999998873321 124688888873
No 242
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=94.81 E-value=0.18 Score=52.09 Aligned_cols=145 Identities=15% Similarity=0.174 Sum_probs=70.5
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcc
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSC 140 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 140 (380)
+.+.+|+|.+||||...+.+...+.+.-..............+++..|+ |....-...+.... .|.. .++
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Ei--d~~~~~lA~~Nl~l------~gi~--~~i 312 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQES--NPTTWKLAAMNMVI------RGID--FNF 312 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCC--CHHHHHHHHHHHHH------TTCC--CBC
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeC--CHHHHHHHHHHHHH------hCCC--ccc
Confidence 3446999999999988777766554321111000000001478898888 33222111111111 1101 111
Q ss_pred eeeccCCC-cccCCCCCCccceEEcc--ccc-ccccCCCccccccCCCCCCCCcc-----EEEccCCCCHHHHHHHHHHH
Q 044727 141 FIAAAPGS-FHGRLFPPCFLNLVYSS--FCL-HWLSRMPKELVSECGIPLLNKRD-----VCVAKTCSPFSVHKAYLDQF 211 (380)
Q Consensus 141 f~~~vpgS-Fy~~l~p~~svdl~~Ss--~al-hWls~~P~~~~~~~~~~~~nkg~-----i~~~~~s~~~~~~~ay~~Q~ 211 (380)
.-+.|+ +....++...+|+|++. +.. .|-... +... +-|.-|. ..+ ++.-
T Consensus 313 --~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~---~~~d---~r~~~g~~~~~~~~~-----~~~~-------- 371 (544)
T 3khk_A 313 --GKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEK---LADD---PRWTINTNGEKRILT-----PPTG-------- 371 (544)
T ss_dssp --CSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGG---GTTC---GGGEECCC--CEECC-----CCTT--------
T ss_pred --ceeccchhcCcccccccccEEEECCCcCCccccchh---hhhh---hhhhcCccccccccc-----CCCc--------
Confidence 112344 44455678899999984 222 353211 1100 0010000 000 1110
Q ss_pred HHHHHHHHHHHHHHhccCceEEEEec
Q 044727 212 EIDFTSFLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 212 ~~D~~~FL~~Ra~eL~pgG~l~~~~~ 237 (380)
..|+ .||.+-.+-|+|||++++.++
T Consensus 372 ~~~~-~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 372 NANF-AWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp CTHH-HHHHHHHHTEEEEEEEEEEEE
T ss_pred chhH-HHHHHHHHHhccCceEEEEec
Confidence 0122 489989999999999999985
No 243
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=94.75 E-value=0.093 Score=49.60 Aligned_cols=21 Identities=10% Similarity=0.110 Sum_probs=17.7
Q ss_pred HHHHHHHhccC-ceEEEEeccC
Q 044727 219 LKFRSEELKTE-GRMVLNFIGN 239 (380)
Q Consensus 219 L~~Ra~eL~pg-G~l~~~~~g~ 239 (380)
|+.-.+.|+|| |.+++-.+.+
T Consensus 166 L~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 166 LDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp HHHHHHHHTTCCSEEEEEESCT
T ss_pred HHHHHHHhCCCCCeEEEEecCC
Confidence 66667899999 9999998863
No 244
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=94.74 E-value=0.048 Score=57.43 Aligned_cols=108 Identities=14% Similarity=0.131 Sum_probs=64.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
+..+|+|+|||+|+.+...+... ++. . -.+.||.-+- |.-..+.+. ..+.++ |...
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~----a~~------~-~~vkVyAVEk--np~A~~a~~-------~v~~N~---~~dk- 412 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAA----KQA------D-RRIKLYAVEK--NPNAVVTLE-------NWQFEE---WGSQ- 412 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHH----HHT------T-CEEEEEEEES--CHHHHHHHH-------HHHHHT---TGGG-
T ss_pred CCcEEEEECCCCcHHHHHHHHHH----Hhc------C-CCcEEEEEEC--CHHHHHHHH-------HHHhcc---CCCe-
Confidence 46899999999999987775554 221 1 2377887765 331111111 112222 2222
Q ss_pred eeccCCCcccCCCCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTSFLKF 221 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~FL~~ 221 (380)
|--|-|+. +.+-++..+|+++| -|+-.. +. |.+ -+++ |.+
T Consensus 413 VtVI~gd~-eev~LPEKVDIIVS----EwMG~f---Ll--------~E~---------mlev---------------L~A 452 (637)
T 4gqb_A 413 VTVVSSDM-REWVAPEKADIIVS----ELLGSF---AD--------NEL---------SPEC---------------LDG 452 (637)
T ss_dssp EEEEESCT-TTCCCSSCEEEEEC----CCCBTT---BG--------GGC---------HHHH---------------HHH
T ss_pred EEEEeCcc-eeccCCcccCEEEE----EcCccc---cc--------ccC---------CHHH---------------HHH
Confidence 33356777 56666789999998 454332 22 111 2345 888
Q ss_pred HHHHhccCceEE
Q 044727 222 RSEELKTEGRMV 233 (380)
Q Consensus 222 Ra~eL~pgG~l~ 233 (380)
|-+-|||||.|+
T Consensus 453 rdr~LKPgGimi 464 (637)
T 4gqb_A 453 AQHFLKDDGVSI 464 (637)
T ss_dssp HGGGEEEEEEEE
T ss_pred HHHhcCCCcEEc
Confidence 999999999875
No 245
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=94.64 E-value=0.015 Score=55.46 Aligned_cols=77 Identities=9% Similarity=-0.105 Sum_probs=48.2
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhc-CCCCCCcce
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTER-GHDDFGSCF 141 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~-~~~~~~~~f 141 (380)
..+|+|+|||+|..|..+... . .+|+.-|+-. .....++... + . .+-.+
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~----------------~-~~V~aVEid~-----------~li~~a~~~~~~-~-~~v~v 100 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKN----------------A-KKVYVIEIDK-----------SLEPYANKLKEL-Y-NNIEI 100 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHH----------------S-SEEEEEESCG-----------GGHHHHHHHHHH-C-SSEEE
T ss_pred cCEEEEECCCchHHHHHHHhc----------------C-CEEEEEECCH-----------HHHHHHHHHhcc-C-CCeEE
Confidence 479999999999999988432 1 4677777632 1111111110 0 0 01234
Q ss_pred eeccCCCcccCCCCCCccceEEccccccccc
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLS 172 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls 172 (380)
+-|++..--+|+.++|.++++...||-+
T Consensus 101 ---i~gD~l~~~~~~~~fD~Iv~NlPy~is~ 128 (295)
T 3gru_A 101 ---IWGDALKVDLNKLDFNKVVANLPYQISS 128 (295)
T ss_dssp ---EESCTTTSCGGGSCCSEEEEECCGGGHH
T ss_pred ---EECchhhCCcccCCccEEEEeCcccccH
Confidence 4478877777888899999887777743
No 246
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=94.53 E-value=0.058 Score=57.49 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHhccCceEEEEeccCC
Q 044727 211 FEIDFTSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 211 ~~~D~~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
..+|...++..-.+-|+|||+|++++..+.
T Consensus 632 ~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~ 661 (703)
T 3v97_A 632 VQRDHLALMKDLKRLLRAGGTIMFSNNKRG 661 (703)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEECCcc
Confidence 346778889888999999999998887654
No 247
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=94.45 E-value=0.12 Score=51.71 Aligned_cols=21 Identities=33% Similarity=0.382 Sum_probs=18.6
Q ss_pred HHHHHHHHHhccCceEEEEec
Q 044727 217 SFLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~ 237 (380)
.||++-.+.|+|||++++.++
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhccCCEEEEEEC
Confidence 678888899999999999986
No 248
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.24 E-value=0.033 Score=51.95 Aligned_cols=20 Identities=10% Similarity=0.027 Sum_probs=17.6
Q ss_pred ceEEEeecCCCCccchHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTL 82 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~ 82 (380)
..+|+|+|||+|..|..+..
T Consensus 30 ~~~VLEIG~G~G~lt~~La~ 49 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLT 49 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTT
T ss_pred cCEEEEEcccccHHHHHHHH
Confidence 47899999999999998854
No 249
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=94.07 E-value=0.032 Score=54.64 Aligned_cols=74 Identities=14% Similarity=-0.093 Sum_probs=44.6
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFG 138 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~ 138 (380)
...+|+|+|||+|..++.+.... +..+|+..|+-. ......+. ..|.. ..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~---------------~~~~v~g~Dis~-----------~~l~~A~~n~~~~gl~-~~ 269 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRR---------------YSGEIIGIEKYR-----------KHLIGAEMNALAAGVL-DK 269 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTT---------------CCSCEEEEESCH-----------HHHHHHHHHHHHTTCG-GG
T ss_pred CCCEEEEccCcCcHHHHHHHHhC---------------CCCeEEEEeCCH-----------HHHHHHHHHHHHcCCC-Cc
Confidence 35789999999999887763211 224788888732 11111111 11200 01
Q ss_pred cceeeccCCCcccCCCCCCccceEEcc
Q 044727 139 SCFIAAAPGSFHGRLFPPCFLNLVYSS 165 (380)
Q Consensus 139 ~~f~~~vpgSFy~~l~p~~svdl~~Ss 165 (380)
-.| +-+++.+..+|++++|++++.
T Consensus 270 i~~---~~~D~~~~~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 270 IKF---IQGDATQLSQYVDSVDFAISN 293 (373)
T ss_dssp CEE---EECCGGGGGGTCSCEEEEEEE
T ss_pred eEE---EECChhhCCcccCCcCEEEEC
Confidence 234 347887777788999999985
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=93.88 E-value=0.041 Score=52.20 Aligned_cols=106 Identities=10% Similarity=0.037 Sum_probs=51.6
Q ss_pred CCCCcchHHHhcHHHHHHHHHhhHHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcc
Q 044727 23 GGEGDNSYANNSAPSREATLKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPIL 102 (380)
Q Consensus 23 gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~ 102 (380)
++....+|.+|-..+..++..+...+ . .....+|+|+|||+|..|..+... ..
T Consensus 13 ~~~~~k~~Gq~fl~~~~i~~~i~~~~-------~---~~~~~~VLDiG~G~G~lt~~La~~-----------------~~ 65 (299)
T 2h1r_A 13 GRENLYFQGQHLLKNPGILDKIIYAA-------K---IKSSDIVLEIGCGTGNLTVKLLPL-----------------AK 65 (299)
T ss_dssp ----------CEECCHHHHHHHHHHH-------C---CCTTCEEEEECCTTSTTHHHHTTT-----------------SS
T ss_pred cccchhccccceecCHHHHHHHHHhc-------C---CCCcCEEEEEcCcCcHHHHHHHhc-----------------CC
Confidence 33344556666555555544433221 1 123479999999999999887211 25
Q ss_pred eEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCCCcceeeccCCCcccCCCCCCccceEEcccccccccC
Q 044727 103 HAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSR 173 (380)
Q Consensus 103 ~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alhWls~ 173 (380)
+|+.-|+-. .....++. ..+ .++ +.-+-|++..-. ..++|++++....||.+.
T Consensus 66 ~v~~vDi~~-----------~~~~~a~~~~~~~~---~~~--v~~~~~D~~~~~--~~~~D~Vv~n~py~~~~~ 121 (299)
T 2h1r_A 66 KVITIDIDS-----------RMISEVKKRCLYEG---YNN--LEVYEGDAIKTV--FPKFDVCTANIPYKISSP 121 (299)
T ss_dssp EEEEECSCH-----------HHHHHHHHHHHHTT---CCC--EEC----CCSSC--CCCCSEEEEECCGGGHHH
T ss_pred EEEEEECCH-----------HHHHHHHHHHHHcC---CCc--eEEEECchhhCC--cccCCEEEEcCCcccccH
Confidence 788888732 11111111 111 112 122457775543 348999999988888654
No 251
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=93.59 E-value=0.63 Score=50.35 Aligned_cols=24 Identities=13% Similarity=0.057 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhccCceEEEEecc
Q 044727 215 FTSFLKFRSEELKTEGRMVLNFIG 238 (380)
Q Consensus 215 ~~~FL~~Ra~eL~pgG~l~~~~~g 238 (380)
...|+.+-.+-|+|||++++.++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 556899999999999999999874
No 252
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=93.57 E-value=0.084 Score=56.13 Aligned_cols=46 Identities=9% Similarity=0.053 Sum_probs=28.1
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDL 109 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDL 109 (380)
+..+|+|+|||+|+.+...+...-.+ ....+ .+.....+.||.-+-
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a-~~~~~-~~~~~~~~kVyAVEk 454 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREY-NNTFR-QGQESLKVKLYIVEK 454 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHH-HHHHS-TTSCCCEEEEEEEEC
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHh-Ccccc-ccccccccEEEEEeC
Confidence 46899999999999987765554211 11111 111222378888776
No 253
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=93.56 E-value=0.19 Score=48.98 Aligned_cols=102 Identities=10% Similarity=0.001 Sum_probs=61.3
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhh---hhcCCCCCCc
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLK---TERGHDDFGS 139 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~---~~~~~~~~~~ 139 (380)
..+|+|+| |+|..++.+.. .. |..+|+..|+.. .+. ...+ ...| ..+
T Consensus 173 ~~~VLDlG-G~G~~~~~la~--------~~-------~~~~v~~vDi~~----------~~l-~~a~~~~~~~g---~~~ 222 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALML--------SG-------LPKRIAVLDIDE----------RLT-KFIEKAANEIG---YED 222 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHH--------HT-------CCSEEEEECSCH----------HHH-HHHHHHHHHHT---CCC
T ss_pred CCEEEEEC-CCCHHHHHHHH--------hC-------CCCEEEEEECCH----------HHH-HHHHHHHHHcC---CCC
Confidence 47999999 99999987721 11 447899999842 111 1111 1112 112
Q ss_pred ceeeccCCCcccCC--CCCCccceEEcccccccccCCCccccccCCCCCCCCccEEEccCCCCHHHHHHHHHHHHHHHHH
Q 044727 140 CFIAAAPGSFHGRL--FPPCFLNLVYSSFCLHWLSRMPKELVSECGIPLLNKRDVCVAKTCSPFSVHKAYLDQFEIDFTS 217 (380)
Q Consensus 140 ~f~~~vpgSFy~~l--~p~~svdl~~Ss~alhWls~~P~~~~~~~~~~~~nkg~i~~~~~s~~~~~~~ay~~Q~~~D~~~ 217 (380)
+..+.|++...+ .+++++|++++..-+++. +...
T Consensus 223 --v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~------------------------------------------~~~~ 258 (373)
T 2qm3_A 223 --IEIFTFDLRKPLPDYALHKFDTFITDPPETLE------------------------------------------AIRA 258 (373)
T ss_dssp --EEEECCCTTSCCCTTTSSCBSEEEECCCSSHH------------------------------------------HHHH
T ss_pred --EEEEEChhhhhchhhccCCccEEEECCCCchH------------------------------------------HHHH
Confidence 233567876522 124689999875322210 1256
Q ss_pred HHHHHHHHhccCceE-EEEecc
Q 044727 218 FLKFRSEELKTEGRM-VLNFIG 238 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l-~~~~~g 238 (380)
||+.-.+.|+|||++ ++++..
T Consensus 259 ~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 259 FVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp HHHHHHHTBCSTTCEEEEEECT
T ss_pred HHHHHHHHcccCCeEEEEEEec
Confidence 788889999999954 666654
No 254
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=93.47 E-value=0.062 Score=55.62 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=50.6
Q ss_pred CCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhh---hcCCCCC
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKT---ERGHDDF 137 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~ 137 (380)
+++.+|||+|||.|..|..+ .+. -.+|..-|+.. ....-.+. +.| ..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~l--------a~~---------ga~V~giD~~~-----------~~i~~a~~~a~~~~--~~ 114 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSL--------ASK---------GATIVGIDFQQ-----------ENINVCRALAEENP--DF 114 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHH--------HHT---------TCEEEEEESCH-----------HHHHHHHHHHHTST--TS
T ss_pred CCCCeEEEECCCCcHHHHHH--------HhC---------CCEEEEECCCH-----------HHHHHHHHHHHhcC--CC
Confidence 45799999999999888776 221 26899999853 11111111 111 01
Q ss_pred CcceeeccCCCcccC--CCCCCccceEEcccccccccC
Q 044727 138 GSCFIAAAPGSFHGR--LFPPCFLNLVYSSFCLHWLSR 173 (380)
Q Consensus 138 ~~~f~~~vpgSFy~~--l~p~~svdl~~Ss~alhWls~ 173 (380)
.--|.. ++..+- .++++++|+|++.-.||++.+
T Consensus 115 ~~~~~~---~~~~~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 115 AAEFRV---GRIEEVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp EEEEEE---CCHHHHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred ceEEEE---CCHHHHhhhccCCCccEEEECcchhcCCC
Confidence 224544 454332 357889999999999999754
No 255
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=93.33 E-value=0.33 Score=50.11 Aligned_cols=133 Identities=15% Similarity=0.143 Sum_probs=70.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|.+||||...+.+...+. .....+++..|+ |....-...+....+ | ....+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~------------~~~~~~i~G~Ei--d~~~~~lA~~Nl~l~------g-i~~~~-- 277 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSR------------QPQTVVYFGQEL--NTSTYNLARMNMILH------G-VPIEN-- 277 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCS------------CTTTCEEEEEES--CHHHHHHHHHHHHHT------T-CCGGG--
T ss_pred CCCEEeecccchhHHHHHHHHHHH------------hccCceEEEEEC--cHHHHHHHHHHHHHc------C-CCcCc--
Confidence 357999999999999888755431 113588999888 332221111111111 1 00001
Q ss_pred eeccCCCcccC---CCCCCccceEEcc--cccccccCCCccccccCCCCCCC-CccEEEccCCCCHHHHHHHHHHHHHHH
Q 044727 142 IAAAPGSFHGR---LFPPCFLNLVYSS--FCLHWLSRMPKELVSECGIPLLN-KRDVCVAKTCSPFSVHKAYLDQFEIDF 215 (380)
Q Consensus 142 ~~~vpgSFy~~---l~p~~svdl~~Ss--~alhWls~~P~~~~~~~~~~~~n-kg~i~~~~~s~~~~~~~ay~~Q~~~D~ 215 (380)
+.-+.|++... .++...+|+|++. +...|-.. .....+ +-|. -|.+ ++.- ..|+
T Consensus 278 ~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d----~rf~~~G~~-------~~~s--------~~~~ 337 (542)
T 3lkd_A 278 QFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDD----PRFSPFGKL-------APKS--------KADF 337 (542)
T ss_dssp EEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGS----TTTGGGSSC-------CCTT--------CCHH
T ss_pred cceEecceecccccccccccccEEEecCCcCCccccc-hhhhhh----hhhhhhhhc-------CCCc--------hhhH
Confidence 01123555444 3567889999986 44555211 111111 1111 0111 1100 1133
Q ss_pred HHHHHHHHHHhc-cCceEEEEecc
Q 044727 216 TSFLKFRSEELK-TEGRMVLNFIG 238 (380)
Q Consensus 216 ~~FL~~Ra~eL~-pgG~l~~~~~g 238 (380)
.|+.+-.+-|+ |||++++.++.
T Consensus 338 -~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 338 -AFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp -HHHHHHHHTBCTTTCEEEEEEET
T ss_pred -HHHHHHHHHhCCCceeEEEEecc
Confidence 48888899999 99999998864
No 256
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=93.18 E-value=0.34 Score=45.81 Aligned_cols=20 Identities=10% Similarity=0.184 Sum_probs=17.3
Q ss_pred HHHHHHHhccC--ceEEEEecc
Q 044727 219 LKFRSEELKTE--GRMVLNFIG 238 (380)
Q Consensus 219 L~~Ra~eL~pg--G~l~~~~~g 238 (380)
|..-.+.|+|| |.+++-.+-
T Consensus 182 L~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 182 LNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp HHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHHHHcCCCCCCcEEEEEec
Confidence 66667889999 999999886
No 257
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=93.13 E-value=0.12 Score=50.69 Aligned_cols=27 Identities=7% Similarity=0.028 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHhccCceEEEEeccCC
Q 044727 214 DFTSFLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 214 D~~~FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
++..++..-.+.|+|||.+++++....
T Consensus 317 ~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 317 GYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 556678888899999999999886443
No 258
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=92.85 E-value=0.3 Score=46.02 Aligned_cols=31 Identities=10% Similarity=-0.097 Sum_probs=24.7
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDL 109 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDL 109 (380)
..+|+|+|||+|+.|+.+.. . ...+|+.+|+
T Consensus 126 g~~VlD~~aG~G~~~i~~a~--------~--------g~~~V~avD~ 156 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAV--------Y--------GKAKVIAIEK 156 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHH--------H--------TCCEEEEECC
T ss_pred CCEEEEecCcCcHHHHHHHH--------h--------cCCeEEEEEC
Confidence 47999999999999998732 1 2367999998
No 259
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=92.52 E-value=0.016 Score=53.43 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=26.0
Q ss_pred chHHHhcHHHHHHHHHhhHHHHHHHHhhhccCCCCceEEEeecCCCCccchHHH
Q 044727 28 NSYANNSAPSREATLKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPT 81 (380)
Q Consensus 28 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~ 81 (380)
.+|.+|-..+..++..+. ..+. .....+|+|+|||+|..|..+.
T Consensus 6 k~~gQ~fl~d~~~~~~i~-------~~~~---~~~~~~VLDiG~G~G~lt~~l~ 49 (244)
T 1qam_A 6 IKHSQNFITSKHNIDKIM-------TNIR---LNEHDNIFEIGSGKGHFTLELV 49 (244)
T ss_dssp ----CCBCCCHHHHHHHH-------TTCC---CCTTCEEEEECCTTSHHHHHHH
T ss_pred ccCCccccCCHHHHHHHH-------HhCC---CCCCCEEEEEeCCchHHHHHHH
Confidence 456666666666554332 2111 1234799999999999998874
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=92.17 E-value=0.031 Score=52.62 Aligned_cols=53 Identities=13% Similarity=-0.036 Sum_probs=32.5
Q ss_pred eccCCCCCcchHHHhcHHHHHHHHHhhHHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHH
Q 044727 19 LFMNGGEGDNSYANNSAPSREATLKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTL 82 (380)
Q Consensus 19 l~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~ 82 (380)
+...|=-...+|.+|-..+..++.++...+. . ... +|+|+|||+|..|..+..
T Consensus 14 ~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~---------~-~~~-~VLEIG~G~G~lt~~L~~ 66 (271)
T 3fut_A 14 LERHGLFADKRFGQNFLVSEAHLRRIVEAAR---------P-FTG-PVFEVGPGLGALTRALLE 66 (271)
T ss_dssp HHHTTCCCSTTSSCCEECCHHHHHHHHHHHC---------C-CCS-CEEEECCTTSHHHHHHHH
T ss_pred HHhcCCCccccCCccccCCHHHHHHHHHhcC---------C-CCC-eEEEEeCchHHHHHHHHH
Confidence 3344444445666666655555544332221 1 224 999999999999998844
No 261
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=92.16 E-value=0.28 Score=49.03 Aligned_cols=32 Identities=13% Similarity=-0.024 Sum_probs=24.2
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
...+|+|+|||+|..|+.+... ..+|+..|..
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~-----------------~~~V~gvD~s 321 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR-----------------GFNVKGFDSN 321 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT-----------------TCEEEEEESC
T ss_pred CCCEEEEeeccchHHHHHHHHc-----------------CCEEEEEECC
Confidence 3479999999999999877221 1478888873
No 262
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=91.82 E-value=0.13 Score=49.49 Aligned_cols=23 Identities=22% Similarity=0.349 Sum_probs=17.8
Q ss_pred HHHHHHHHhccCceEEEEeccCC
Q 044727 218 FLKFRSEELKTEGRMVLNFIGND 240 (380)
Q Consensus 218 FL~~Ra~eL~pgG~l~~~~~g~~ 240 (380)
|+..-.+.|+|||++++..+.+.
T Consensus 273 ~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 273 FIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp GHHHHHHHEEEEEEEEEEEEESS
T ss_pred HHHHHHHHcCCCCEEEEEEeecC
Confidence 35555778999999999877664
No 263
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=91.43 E-value=0.04 Score=52.06 Aligned_cols=21 Identities=14% Similarity=0.058 Sum_probs=18.1
Q ss_pred ceEEEeecCCCCccchHHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQ 83 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ 83 (380)
..+|+|+|||+|..|..+...
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~ 63 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIAR 63 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHH
T ss_pred cCEEEEEccccHHHHHHHHHh
Confidence 479999999999999988544
No 264
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=90.52 E-value=0.03 Score=51.23 Aligned_cols=20 Identities=10% Similarity=0.091 Sum_probs=17.5
Q ss_pred CceEEEeecCCCCccchHHH
Q 044727 62 DCIRFTDMGCSSGPNAFLPT 81 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~ 81 (380)
...+|+|+|||+|..|..+.
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~ 48 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLA 48 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHH
Confidence 35799999999999999883
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=89.33 E-value=0.039 Score=51.13 Aligned_cols=18 Identities=11% Similarity=0.102 Sum_probs=16.3
Q ss_pred ceEEEeecCCCCccchHH
Q 044727 63 CIRFTDMGCSSGPNAFLP 80 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~ 80 (380)
..+|+|+|||+|..|..+
T Consensus 32 ~~~VLDiG~G~G~lt~~L 49 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVL 49 (249)
T ss_dssp TCEEEEEESCHHHHHHHH
T ss_pred cCEEEEEcCchHHHHHHH
Confidence 479999999999998887
No 266
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=89.24 E-value=2 Score=40.97 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=18.1
Q ss_pred CCceEEEeecCCCCccchHHHH
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTL 82 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~ 82 (380)
....+|+|||||.|..|..+++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~ 101 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAA 101 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHT
T ss_pred CCCCEEEEcCCCCCHHHHHHHH
Confidence 3458999999999999987743
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=87.07 E-value=0.33 Score=46.26 Aligned_cols=21 Identities=10% Similarity=-0.110 Sum_probs=18.1
Q ss_pred ceEEEeecCCCCccchHHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQ 83 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ 83 (380)
..+|+|+|||+|..|+.+++.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~ 47 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEH 47 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHHHH
Confidence 469999999999999988554
No 268
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=86.86 E-value=0.55 Score=43.41 Aligned_cols=16 Identities=6% Similarity=-0.027 Sum_probs=14.7
Q ss_pred ceEEEeecCCCCccch
Q 044727 63 CIRFTDMGCSSGPNAF 78 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~ 78 (380)
..+|+|+|||+|..|.
T Consensus 22 ~~~VLEIG~G~G~lt~ 37 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE 37 (252)
T ss_dssp TCCEEEECCTTTTTHH
T ss_pred cCEEEEECCCCcHHHH
Confidence 4689999999999999
No 269
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=86.31 E-value=0.51 Score=41.02 Aligned_cols=78 Identities=12% Similarity=0.053 Sum_probs=44.0
Q ss_pred CceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhccCcchHHHhhhhcCCCCCCcce
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCF 141 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 141 (380)
...+|+|+|||+|..++.+.. . + + -+|+..|+-. ......+.........-.+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~--------~----~---~-~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~~ 101 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALL--------L----G---A-KEVICVEVDK-----------EAVDVLIENLGEFKGKFKV 101 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T----T---C-SEEEEEESCH-----------HHHHHHHHHTGGGTTSEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHH--------c----C---C-CEEEEEECCH-----------HHHHHHHHHHHHcCCCEEE
Confidence 357999999999998877621 1 0 2 3688888732 1111111110000011123
Q ss_pred eeccCCCcccCCCCCCccceEEccccccccc
Q 044727 142 IAAAPGSFHGRLFPPCFLNLVYSSFCLHWLS 172 (380)
Q Consensus 142 ~~~vpgSFy~~l~p~~svdl~~Ss~alhWls 172 (380)
+.+++.. +| .++|++++.-.+|+.+
T Consensus 102 ---~~~d~~~--~~-~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 102 ---FIGDVSE--FN-SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp ---EESCGGG--CC-CCCSEEEECCCCSSSS
T ss_pred ---EECchHH--cC-CCCCEEEEcCCCcccc
Confidence 4467755 24 5899999887777654
No 270
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=86.27 E-value=1.5 Score=41.74 Aligned_cols=34 Identities=15% Similarity=0.040 Sum_probs=26.5
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|.-|+.+...+ . +.-+|+.+|+-
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~----~----------~~g~V~a~D~~ 136 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALL----K----------NQGKIFAFDLD 136 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHH----T----------TCSEEEEEESC
T ss_pred CCEEEEeCCChhHHHHHHHHHh----C----------CCCEEEEEeCC
Confidence 3699999999999999885443 0 34789999984
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=85.94 E-value=1.2 Score=45.68 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=18.6
Q ss_pred HHHHHHHHHhccCceEEEEec
Q 044727 217 SFLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~ 237 (380)
.|+..-.+-|+|||++++.++
T Consensus 293 ~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 293 CFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEec
Confidence 578888899999999999976
No 272
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=85.09 E-value=3.2 Score=40.78 Aligned_cols=20 Identities=30% Similarity=0.318 Sum_probs=16.6
Q ss_pred ceEEEeecCCCCccchHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTL 82 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~ 82 (380)
..+|+|.+||+|...+....
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHH
Confidence 47899999999998876644
No 273
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=84.57 E-value=4 Score=39.87 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=17.3
Q ss_pred ceEEEeecCCCCccchHHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQ 83 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ 83 (380)
..+|+|.|||+|..++.+...
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHH
Confidence 478999999999988877543
No 274
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=83.18 E-value=1.7 Score=42.74 Aligned_cols=88 Identities=9% Similarity=0.023 Sum_probs=52.6
Q ss_pred hHHHHHHHHhhhcc-----CCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCCchhhhhc
Q 044727 45 KPLLHESLFDLYCN-----GFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSK 119 (380)
Q Consensus 45 ~~~l~~ai~~~~~~-----~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~ 119 (380)
.=.|++|+...... ....-.+++|+|||.|.-|..+++. ...|+.-|.-
T Consensus 189 ~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r-----------------g~~V~aVD~~--------- 242 (375)
T 4auk_A 189 TLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR-----------------NMWVYSVDNG--------- 242 (375)
T ss_dssp HHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT-----------------TCEEEEECSS---------
T ss_pred HHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC-----------------CCEEEEEEhh---------
Confidence 33466666544210 1122489999999999999876321 2689999962
Q ss_pred cCcchHHHhhhhcCCCCCCcceeeccCCCcccCCCCCCccceEEcccccc
Q 044727 120 SLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLH 169 (380)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~alh 169 (380)
+.. ..+.. . ..-.| +.++.+....+...+|+++|=.+.+
T Consensus 243 --~l~-~~l~~----~-~~V~~---~~~d~~~~~~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 243 --PMA-QSLMD----T-GQVTW---LREDGFKFRPTRSNISWMVCDMVEK 281 (375)
T ss_dssp --CCC-HHHHT----T-TCEEE---ECSCTTTCCCCSSCEEEEEECCSSC
T ss_pred --hcC-hhhcc----C-CCeEE---EeCccccccCCCCCcCEEEEcCCCC
Confidence 111 11111 0 01234 4578877777788899998855443
No 275
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=82.26 E-value=7.8 Score=37.90 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=16.6
Q ss_pred ceEEEeecCCCCccchHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTL 82 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~ 82 (380)
..+|+|.+||+|...+....
T Consensus 195 ~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHH
Confidence 47899999999998876654
No 276
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=81.95 E-value=1.4 Score=42.26 Aligned_cols=64 Identities=22% Similarity=0.311 Sum_probs=40.1
Q ss_pred CCceEEEeecC------CCCccchHHHHHHHHHHHHHhhhcCCCCCc-ceEEecCCCCCchhhhhccCcchHHHhhhhcC
Q 044727 61 PDCIRFTDMGC------SSGPNAFLPTLQVIEALDTICSRLKHKPPI-LHAFLNDLPGNDFNTVSKSLPSFYERLKTERG 133 (380)
Q Consensus 61 ~~~~~IaD~GC------s~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~-~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~ 133 (380)
|...+|+|+|+ +-|. .++ ++. + |+ ..|+-+|| ||+.+.
T Consensus 108 p~gmrVLDLGA~s~kg~APGS-------~VL---r~~----~---p~g~~VVavDL--~~~~sd---------------- 152 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT-------AVL---RQW----L---PTGTLLVDSDL--NDFVSD---------------- 152 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH-------HHH---HHH----S---CTTCEEEEEES--SCCBCS----------------
T ss_pred cCCCEEEeCCCCCCCCCCCcH-------HHH---HHh----C---CCCcEEEEeeC--cccccC----------------
Confidence 44599999995 6666 122 221 1 44 58999999 665541
Q ss_pred CCCCCcceeeccCCCcccCCCCCCccceEEcccc
Q 044727 134 HDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFC 167 (380)
Q Consensus 134 ~~~~~~~f~~~vpgSFy~~l~p~~svdl~~Ss~a 167 (380)
..+| +-|++ ..+.....+|+++|=.|
T Consensus 153 ----a~~~---IqGD~-~~~~~~~k~DLVISDMA 178 (344)
T 3r24_A 153 ----ADST---LIGDC-ATVHTANKWDLIISDMY 178 (344)
T ss_dssp ----SSEE---EESCG-GGEEESSCEEEEEECCC
T ss_pred ----CCeE---EEccc-cccccCCCCCEEEecCC
Confidence 1244 33776 44666788999987544
No 277
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=81.85 E-value=0.93 Score=38.97 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=24.5
Q ss_pred CceEEEeecCCCCc-cchHHHHHHHHHHHHHhhhcCCCCCcceEEecCC
Q 044727 62 DCIRFTDMGCSSGP-NAFLPTLQVIEALDTICSRLKHKPPILHAFLNDL 109 (380)
Q Consensus 62 ~~~~IaD~GCs~G~-Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDL 109 (380)
.+.+|+|+|||.|. |+..+ .+. ..+.|...|+
T Consensus 35 ~~~rVlEVG~G~g~~vA~~L--------a~~--------~g~~V~atDI 67 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYI--------RKH--------SKVDLVLTDI 67 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHH--------HHH--------SCCEEEEECS
T ss_pred CCCcEEEEccCCChHHHHHH--------HHh--------CCCeEEEEEC
Confidence 35799999999995 88887 221 1388888888
No 278
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=78.60 E-value=0.85 Score=42.33 Aligned_cols=24 Identities=13% Similarity=0.064 Sum_probs=20.6
Q ss_pred CCceEEEeecCCCCccchHHHHHH
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQV 84 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~i 84 (380)
.++.+|+|+|||+|.|++.++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 357999999999999999987654
No 279
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=78.09 E-value=3.7 Score=38.36 Aligned_cols=27 Identities=19% Similarity=0.140 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHhccCceEEEEec
Q 044727 211 FEIDFTSFLKFRSEELKTEGRMVLNFI 237 (380)
Q Consensus 211 ~~~D~~~FL~~Ra~eL~pgG~l~~~~~ 237 (380)
+-.++..+++.-.+.|+|||.+++...
T Consensus 72 ~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 72 FLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 444556677777899999999999875
No 280
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=76.65 E-value=1.5 Score=43.46 Aligned_cols=31 Identities=16% Similarity=0.003 Sum_probs=24.0
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..|+.+... ..+|+..|..
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~-----------------~~~V~gvD~s 317 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQ-----------------AASVVGVEGV 317 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTT-----------------SSEEEEEESC
T ss_pred CCEEEECCCCCCHHHHHHHhh-----------------CCEEEEEeCC
Confidence 469999999999999987221 2578888873
No 281
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=74.43 E-value=1.3 Score=43.42 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=26.3
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLP 110 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 110 (380)
..+|+|+|||+|..++.+...+ +..+|+.+|+-
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~---------------~~~~V~avDi~ 80 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET---------------PAEEVWLNDIS 80 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS---------------SCSEEEEEESC
T ss_pred CCEEEECCCchhHHHHHHHHhC---------------CCCeEEEEECC
Confidence 4789999999999999884432 33679999983
No 282
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=72.32 E-value=1.1 Score=41.41 Aligned_cols=18 Identities=17% Similarity=0.182 Sum_probs=16.3
Q ss_pred ceEEEeecCCCCccchHH
Q 044727 63 CIRFTDMGCSSGPNAFLP 80 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~ 80 (380)
..+|+|+|||+|..|+.+
T Consensus 84 ~~~VLDlgcG~G~~a~~l 101 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVL 101 (258)
T ss_dssp CCCEEETTCTTCHHHHHH
T ss_pred cCeEEEeeCccCHHHHHH
Confidence 468999999999999987
No 283
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=71.71 E-value=21 Score=37.62 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=16.6
Q ss_pred ceEEEeecCCCCccchHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTL 82 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~ 82 (380)
..+|+|.+||||...+....
T Consensus 191 ~~~llDP~CGSGt~lIeAa~ 210 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAM 210 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHH
Confidence 46899999999998886644
No 284
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=66.22 E-value=3.6 Score=39.74 Aligned_cols=17 Identities=12% Similarity=0.245 Sum_probs=15.5
Q ss_pred eEEEeecCCCCccchHH
Q 044727 64 IRFTDMGCSSGPNAFLP 80 (380)
Q Consensus 64 ~~IaD~GCs~G~Ns~~~ 80 (380)
.+|+|+|||+|..|+.+
T Consensus 215 ~~vLDl~cG~G~~~l~l 231 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLAL 231 (369)
T ss_dssp SEEEEESCTTSHHHHHH
T ss_pred CEEEEccCCCCHHHHHH
Confidence 57999999999999976
No 285
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=56.75 E-value=12 Score=36.65 Aligned_cols=65 Identities=17% Similarity=0.163 Sum_probs=39.5
Q ss_pred CCCcchHHHhcHHHHHHHHHhhHHHHHHHHhhhccCCCCceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcce
Q 044727 24 GEGDNSYANNSAPSREATLKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILH 103 (380)
Q Consensus 24 G~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~ 103 (380)
|.....|+-+...-+.....+...+... . ....+|+|++||+|..++.+.+.. . ..-+
T Consensus 22 ~~~~~Ffn~~~~~nR~l~~~~~~~~~~~-~-------~~g~~VLDlfaGtG~~sl~aa~~~-------------~-ga~~ 79 (392)
T 3axs_A 22 SDMPVFYNPRMRVNRDLAVLGLEYLCKK-L-------GRPVKVADPLSASGIRAIRFLLET-------------S-CVEK 79 (392)
T ss_dssp TTCCSSCCGGGHHHHHHHHHHHHHHHHH-H-------CSCEEEEESSCTTSHHHHHHHHHC-------------S-CEEE
T ss_pred CCCCEEEcCCcHHHHHHHHHHHHHHhhc-c-------CCCCEEEECCCcccHHHHHHHHhC-------------C-CCCE
Confidence 4456788666655555443333222110 0 124799999999999999884432 0 1267
Q ss_pred EEecCCC
Q 044727 104 AFLNDLP 110 (380)
Q Consensus 104 v~~nDLp 110 (380)
|+.+|+-
T Consensus 80 V~avDi~ 86 (392)
T 3axs_A 80 AYANDIS 86 (392)
T ss_dssp EEEECSC
T ss_pred EEEEECC
Confidence 8999983
No 286
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=56.40 E-value=3.3 Score=41.09 Aligned_cols=18 Identities=11% Similarity=0.082 Sum_probs=15.8
Q ss_pred ceEEEeecCCCCccchHH
Q 044727 63 CIRFTDMGCSSGPNAFLP 80 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~ 80 (380)
..+|+|+|||+|..++.+
T Consensus 94 g~~VLDLgcG~G~~al~L 111 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIAL 111 (410)
T ss_dssp TCEEEESSCSSSHHHHHH
T ss_pred CCEEEEeCCCchHHHHHH
Confidence 368999999999998876
No 287
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=53.43 E-value=7.3 Score=37.21 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=25.1
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGN 112 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~N 112 (380)
..+|+|||||+|..|..+... ... -.|+.-|+-.+
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~--------------~gv-~~V~avdvG~~ 129 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQ--------------KRV-QEVRGYTKGGP 129 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTC--------------TTE-EEEEEECCCST
T ss_pred CCEEEEeCCCCCcHHHHHHhh--------------cCC-CEEEEEEcCCC
Confidence 369999999999999865111 112 47888998664
No 288
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=53.07 E-value=4.4 Score=37.50 Aligned_cols=19 Identities=21% Similarity=0.251 Sum_probs=17.1
Q ss_pred eEEEeecCCCCccchHHHH
Q 044727 64 IRFTDMGCSSGPNAFLPTL 82 (380)
Q Consensus 64 ~~IaD~GCs~G~Ns~~~~~ 82 (380)
.+|+|+|||+|..|+.+.+
T Consensus 90 ~~VLDl~~G~G~dal~lA~ 108 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLAS 108 (258)
T ss_dssp CCEEETTCTTCHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHH
Confidence 7999999999999998844
No 289
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=52.28 E-value=9.7 Score=35.30 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=24.4
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPG 111 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~ 111 (380)
..+|+|||||.|..|..+... ..+ -.|+.-|+-.
T Consensus 79 g~~VvDLGaapGGWSq~~a~~--------------~g~-~~V~avdvG~ 112 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGL--------------KKV-TEVRGYTKGG 112 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTS--------------TTE-EEEEEECCCS
T ss_pred CCEEEEcCCCCCcHHHHHHHh--------------cCC-CEEEEEecCC
Confidence 469999999999999865211 112 4788889854
No 290
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=46.08 E-value=11 Score=35.85 Aligned_cols=24 Identities=25% Similarity=0.333 Sum_probs=20.3
Q ss_pred CCceEEEeecCCCCccchHHHHHH
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQV 84 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~i 84 (380)
..+++|+|+|=|+|.|++..+...
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~ 118 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHL 118 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCccHHHHHHHHHH
Confidence 457999999999999998876655
No 291
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=42.01 E-value=15 Score=34.04 Aligned_cols=18 Identities=11% Similarity=-0.060 Sum_probs=15.4
Q ss_pred ceEEEeecCCCCccchHH
Q 044727 63 CIRFTDMGCSSGPNAFLP 80 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~ 80 (380)
.-+|+|++||+|..++.+
T Consensus 236 ~~~vlD~f~GsGt~~~~a 253 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAA 253 (297)
T ss_dssp TCEEEETTCTTTHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH
Confidence 368999999999887766
No 292
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=38.03 E-value=11 Score=36.84 Aligned_cols=20 Identities=10% Similarity=-0.154 Sum_probs=17.0
Q ss_pred CCceEEEeecCCCCccchHH
Q 044727 61 PDCIRFTDMGCSSGPNAFLP 80 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~ 80 (380)
+++.+|+|+|||+|..+..+
T Consensus 187 p~pkrVL~IGgG~G~~arel 206 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEI 206 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHH
Confidence 56899999999999876655
No 293
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=35.95 E-value=29 Score=26.16 Aligned_cols=30 Identities=27% Similarity=0.657 Sum_probs=25.0
Q ss_pred cccccCcccCCHHHHHHHHH----hcCceeEeEEE
Q 044727 269 ESFHFPMYNPCVEEVRQVIE----REGSFNIHQLE 299 (380)
Q Consensus 269 d~f~~P~Y~ps~eE~~~~ie----~~GsF~I~~~e 299 (380)
.+|-+|+|..++||-..+-| +.| |.|.++.
T Consensus 45 ~s~EVPV~A~sLdEAlE~AE~eYeeaG-F~V~RVR 78 (84)
T 2lmc_A 45 HSFEVPIYAETLDEALELAEWQYVPAG-FEVTRVR 78 (84)
T ss_dssp CEEEEEECCSSHHHHHHHHHHTTGGGT-CEEEEEE
T ss_pred ceEEEeeecccHHHHHHHHHHHhhhcc-ceEEEec
Confidence 46889999999999888887 346 9998875
No 294
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=35.44 E-value=45 Score=32.17 Aligned_cols=26 Identities=15% Similarity=0.093 Sum_probs=21.1
Q ss_pred HHHHHHHHHhccCceEEEEeccCCCc
Q 044727 217 SFLKFRSEELKTEGRMVLNFIGNDKY 242 (380)
Q Consensus 217 ~FL~~Ra~eL~pgG~l~~~~~g~~~~ 242 (380)
.+|..=.+-|||||+||-++..-.+.
T Consensus 265 ~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 265 QLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp HHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred HHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 45777788899999999999876644
No 295
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=31.04 E-value=63 Score=39.25 Aligned_cols=39 Identities=10% Similarity=-0.056 Sum_probs=26.5
Q ss_pred ceEEEeecCCCCccchHHHHHHHHHHHHHhhhcCCCCCcceEEecCCCC
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPG 111 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~ 111 (380)
.++|+++|.|+|..|..++..+ .. .+....+..+.|...
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l----~~------~~~~~~~yt~td~s~ 1279 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALL----NT------QPVMDLDYTATDRNP 1279 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHT----TT------SSSCEEEEEEECSSS
T ss_pred CceEEEECCCccHHHHHHHHhh----cc------cCcccceEEEecCCh
Confidence 5899999999999987665443 10 011235778888764
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=30.61 E-value=18 Score=33.68 Aligned_cols=18 Identities=22% Similarity=0.573 Sum_probs=16.0
Q ss_pred ceEEEeecCCCCccchHH
Q 044727 63 CIRFTDMGCSSGPNAFLP 80 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~ 80 (380)
-.+|+||||+-|.=|..+
T Consensus 74 g~~VVDLGaAPGGWSQvA 91 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYA 91 (269)
T ss_dssp CEEEEEETCTTSHHHHHH
T ss_pred CCEEEEcCCCCCHHHHHH
Confidence 589999999999988766
No 297
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=30.47 E-value=21 Score=37.29 Aligned_cols=23 Identities=17% Similarity=0.211 Sum_probs=20.7
Q ss_pred CceEEEeecCCCCccchHHHHHH
Q 044727 62 DCIRFTDMGCSSGPNAFLPTLQV 84 (380)
Q Consensus 62 ~~~~IaD~GCs~G~Ns~~~~~~i 84 (380)
++++|+|+|.|+|.|.+..++..
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~ 80 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDF 80 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHH
T ss_pred CceEEEEecCchHHHHHHHHHHH
Confidence 57999999999999999997764
No 298
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=28.56 E-value=29 Score=32.67 Aligned_cols=21 Identities=10% Similarity=-0.179 Sum_probs=18.2
Q ss_pred ceEEEeecCCCCccchHHHHH
Q 044727 63 CIRFTDMGCSSGPNAFLPTLQ 83 (380)
Q Consensus 63 ~~~IaD~GCs~G~Ns~~~~~~ 83 (380)
..+++|.+||.|.-|..+++.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~ 43 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER 43 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT
T ss_pred CCEEEEeCCCCcHHHHHHHHC
Confidence 369999999999999988664
No 299
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=23.14 E-value=34 Score=35.47 Aligned_cols=24 Identities=13% Similarity=0.064 Sum_probs=21.1
Q ss_pred CCceEEEeecCCCCccchHHHHHH
Q 044727 61 PDCIRFTDMGCSSGPNAFLPTLQV 84 (380)
Q Consensus 61 ~~~~~IaD~GCs~G~Ns~~~~~~i 84 (380)
...++|+|+|-|+|.|.+..+...
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~ 88 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAF 88 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHHH
Confidence 356999999999999999997764
No 300
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=23.12 E-value=36 Score=26.20 Aligned_cols=41 Identities=12% Similarity=0.290 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHccCcccc----cccccccCcccCCHHHHHHHHHh
Q 044727 249 LMGMVLNDMVYEGLIEVS----KLESFHFPMYNPCVEEVRQVIER 289 (380)
Q Consensus 249 ~l~~al~~mv~eG~i~~e----~~d~f~~P~Y~ps~eE~~~~ie~ 289 (380)
.+.+++..|..+|+|... .-......+|..+.+++...++.
T Consensus 49 tV~~~L~~L~~~GlV~~~~~~~~~~g~~v~~~~~~~~~i~~~~~~ 93 (110)
T 1q1h_A 49 DVRKKLNLLEEQGFVSYRKTRDKDSGWFIYYWKPNIDQINEILLN 93 (110)
T ss_dssp HHHHHHHHHHHHTSCEEEEEC---CCCCEEEEECTHHHHC-----
T ss_pred HHHHHHHHHHHCCCEEEEecccCCCceEEEEeecCHHHHHHHHHH
Confidence 567778999999999887 33444444557788888777763
No 301
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=20.06 E-value=83 Score=29.24 Aligned_cols=53 Identities=9% Similarity=-0.055 Sum_probs=31.0
Q ss_pred HHHHHHHhccCceEEEEeccCCCcchhHHHHHHHHHHHHHHccCcccccccccc-cCcccCC
Q 044727 219 LKFRSEELKTEGRMVLNFIGNDKYHTGVFELMGMVLNDMVYEGLIEVSKLESFH-FPMYNPC 279 (380)
Q Consensus 219 L~~Ra~eL~pgG~l~~~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~-~P~Y~ps 279 (380)
|..-..-|+|||.+++=-.+. |.-..+||++..++--++- .++.+. .+.|++.
T Consensus 227 Le~~~p~L~pGGiIv~DD~~~-------~~G~~~Av~Ef~~~~~i~~-~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 227 LTNLYPKVSVGGYVIVDDYMM-------CPPCKDAVDEYRAKFDIAD-ELITIDRDGVYWQR 280 (282)
T ss_dssp HHHHGGGEEEEEEEEESSCTT-------CHHHHHHHHHHHHHTTCCS-CCEECSSSCEEEEC
T ss_pred HHHHHhhcCCCEEEEEcCCCC-------CHHHHHHHHHHHHhcCCce-EEEEecCEEEEEEe
Confidence 555566799999988854421 2334667787766644443 244443 3555543
Done!