BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044728
(450 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425204|ref|XP_002266641.1| PREDICTED: uncharacterized protein LOC100250497 [Vitis vinifera]
gi|296088702|emb|CBI38152.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/450 (87%), Positives = 417/450 (92%), Gaps = 3/450 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCWS S V DEFEKLV+RMNPPRVTVDN S+R ATLIKVDSAN+RGSLLE+VQVLND+
Sbjct: 1 MDCWSPSLTVDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDM 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
DLIIRRAYISSDGEWFMDVFHVTDQ GNKLSEDDV+ERIQQSLGPRARSFRSLRRSVGVQ
Sbjct: 61 DLIIRRAYISSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQ 120
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
AA EHTTIELTGRDRPGLLSEVFAVL+DLKCNV+ AEVWTHNSRMASVVYIT + TGLPI
Sbjct: 121 AANEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPI 180
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
DDPD L KIK+LLLYVLKGDRDKRSANTAVSV ST+ +RRLHQMMYADRDYDM +SGS
Sbjct: 181 DDPDRLVKIKQLLLYVLKGDRDKRSANTAVSVGSTNTQRRLHQMMYADRDYDM---DSGS 237
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
+ RSKPLVTVE+ DKGYTVVNLRCPDRPKLLFD VCTLTDMQYVV+HATVIAE PEAY
Sbjct: 238 TNDRSKPLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAY 297
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEYYIRHVDG PISSEAE+QRVI CLEAAI+RRTSEGI LELC EDR GLLSDVTRIFRE
Sbjct: 298 QEYYIRHVDGCPISSEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRE 357
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP 420
NGLSVTRAEVTTRGSQAVN FYV D+SGNPVKSETIE+VRKEIGLTILRVKDDAYSKSPP
Sbjct: 358 NGLSVTRAEVTTRGSQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKDDAYSKSPP 417
Query: 421 QESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
QESGRFSLGNLFRSRSEK LYNLGL++S S
Sbjct: 418 QESGRFSLGNLFRSRSEKVLYNLGLMRSYS 447
>gi|147855097|emb|CAN83845.1| hypothetical protein VITISV_001862 [Vitis vinifera]
Length = 465
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/438 (88%), Positives = 407/438 (92%), Gaps = 3/438 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCWS S V DEFEKLV+RMNPPRVTVDN S+R ATLIKVDSAN+RGSLLE+VQVLND+
Sbjct: 1 MDCWSPSLTVDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDM 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
DLIIRRAYISSDGEWFMDVFHVTDQ GNKLSEDDV+ERIQQSLGPRARSFRSLRRSVGVQ
Sbjct: 61 DLIIRRAYISSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQ 120
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
AA EHTTIELTGRDRPGLLSEVFAVL+DLKCNV+ AEVWTHNSRMASVVYIT + TGLPI
Sbjct: 121 AANEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPI 180
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
DDPD L KIK+LLLYVLKGDRDKRSANTAVSV ST+ +RRLHQMMYADRDYDM +SGS
Sbjct: 181 DDPDRLVKIKQLLLYVLKGDRDKRSANTAVSVGSTNTQRRLHQMMYADRDYDM---DSGS 237
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
+ RSKPLVTVE+ DKGYTVVNLRCPDRPKLLFD VCTLTDMQYVV+HATVIAE PEAY
Sbjct: 238 TNDRSKPLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAY 297
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEYYIRHVDG PISSEAE+QRVI CLEAAI+RRTSEGI LELC EDR GLLSDVTRIFRE
Sbjct: 298 QEYYIRHVDGCPISSEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRE 357
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP 420
NGLSVTRAEVTTRGSQAVN FYV D+SGNPVKSETIE+VRKEIGLTILRVKDDAYSKSPP
Sbjct: 358 NGLSVTRAEVTTRGSQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKDDAYSKSPP 417
Query: 421 QESGRFSLGNLFRSRSEK 438
QESGRFSLGNLFRSRSEK
Sbjct: 418 QESGRFSLGNLFRSRSEK 435
>gi|255547636|ref|XP_002514875.1| amino acid binding protein, putative [Ricinus communis]
gi|223545926|gb|EEF47429.1| amino acid binding protein, putative [Ricinus communis]
Length = 450
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/450 (85%), Positives = 410/450 (91%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCWS S + DEFEKLV+RMNPPRVTVDN ++RKATLIKVDSANKRGSLLE+VQVL DL
Sbjct: 1 MDCWSPSVTMDDEFEKLVIRMNPPRVTVDNATSRKATLIKVDSANKRGSLLEVVQVLTDL 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
DL+IRRAYISSDGEWFMDVFHVTDQ+GNKLSEDDV+ERIQQSLGPRA SFRSLRRSVGVQ
Sbjct: 61 DLLIRRAYISSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRACSFRSLRRSVGVQ 120
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
A E+TTIELTGRDRPGLLSEVFAVL+DLKCNV+ AEVWTHNSRMASVVYIT E TG PI
Sbjct: 121 TASENTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPI 180
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
++PD L KIK+LLLYVLKGDRDKRSANTAVSV STHKERRLHQMMYADRDYD++ E GS
Sbjct: 181 NEPDRLTKIKQLLLYVLKGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDIDDGEGGS 240
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
S R KPLVTVE+C DKGYTVVNLRCPDRPKLLFD VCTLTDMQYVVYHAT+IAE PEAY
Sbjct: 241 TSERRKPLVTVENCADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAY 300
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEYYIRH+DG+PISSEAERQRVINCLEAAI+RR EGI LELC EDR GLLS+VTRIFRE
Sbjct: 301 QEYYIRHMDGSPISSEAERQRVINCLEAAIRRRNPEGIRLELCSEDRIGLLSEVTRIFRE 360
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP 420
NGLSVTRAEVTTR SQAVN FYV DASG PVKSETIE+VRKEIGLTILRVKDD+ S P
Sbjct: 361 NGLSVTRAEVTTRDSQAVNAFYVTDASGYPVKSETIEAVRKEIGLTILRVKDDSNSPPPQ 420
Query: 421 QESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+E GRFSLGN+FRSRSEKFLYNLGLIKS S
Sbjct: 421 EERGRFSLGNIFRSRSEKFLYNLGLIKSYS 450
>gi|449445562|ref|XP_004140541.1| PREDICTED: uncharacterized protein LOC101218687 [Cucumis sativus]
gi|449526489|ref|XP_004170246.1| PREDICTED: uncharacterized LOC101218687 [Cucumis sativus]
Length = 451
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/451 (86%), Positives = 413/451 (91%), Gaps = 1/451 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCWS S + DEFEKLV RMNPPRVTVDN S+RKATLIKVDSANKRGSLLE+VQVLNDL
Sbjct: 1 MDCWSLSLPLDDEFEKLVNRMNPPRVTVDNDSSRKATLIKVDSANKRGSLLEVVQVLNDL 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+LIIRRAYISSDGEWFMDVFHVTDQ GNKLSE+DV+ERIQQSLGPR RSFRSLRRSVGVQ
Sbjct: 61 NLIIRRAYISSDGEWFMDVFHVTDQRGNKLSENDVAERIQQSLGPRGRSFRSLRRSVGVQ 120
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
AA EHTTIELTGRDRPGLLSEVFAVL+DLKCNV+ AEVWTHNSRMASVVYIT EATG PI
Sbjct: 121 AAEEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPI 180
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
DDPD L KIK+LLL+VLKGDRDKRSANTAVSV STHKERRLHQMMYADRDYD + + GS
Sbjct: 181 DDPDRLGKIKQLLLFVLKGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDQDDLDCGS 240
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
S R KPLVTVESC DKGYTVVNLR PDRPKLLFD VCTLTDMQYVVYHATVIAE PEA
Sbjct: 241 TSERRKPLVTVESCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEAT 300
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEYYIRH+DG+PISSEAERQRVI+CLEAAI+RRTSEGI LELC +DRAGLLSDVTRIFRE
Sbjct: 301 QEYYIRHMDGSPISSEAERQRVIHCLEAAIRRRTSEGIRLELCSDDRAGLLSDVTRIFRE 360
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYS-KSP 419
NGLSVTRAEVTTRG+QAVNVFYV DASGNPVKSE IE+VRKEIGLT+L VKDD + KSP
Sbjct: 361 NGLSVTRAEVTTRGTQAVNVFYVTDASGNPVKSEMIEAVRKEIGLTVLCVKDDEFCMKSP 420
Query: 420 PQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
ES RFSLGNLFRSRSEKFLYNLGLIKSCS
Sbjct: 421 SPESSRFSLGNLFRSRSEKFLYNLGLIKSCS 451
>gi|224053525|ref|XP_002297856.1| predicted protein [Populus trichocarpa]
gi|118487724|gb|ABK95686.1| unknown [Populus trichocarpa]
gi|222845114|gb|EEE82661.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/450 (85%), Positives = 416/450 (92%), Gaps = 2/450 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCWS DEFEKLV+RMNPPRVTVDN S+RKATLIKVDSANKRGSLLE+VQVL DL
Sbjct: 1 MDCWSP-LTTDDEFEKLVIRMNPPRVTVDNASSRKATLIKVDSANKRGSLLEVVQVLTDL 59
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+LIIRRAYISSDGEWFMDVF+VTDQ+GNKLSEDDV+ERIQQSLGPR RSFRSLRRSVGVQ
Sbjct: 60 NLIIRRAYISSDGEWFMDVFYVTDQHGNKLSEDDVAERIQQSLGPRGRSFRSLRRSVGVQ 119
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
AA E+TTIELTGRDRPGLLSE+FA+L+DLKCNV+ +EVWTHNSRMASVVYIT EATGLPI
Sbjct: 120 AAAENTTIELTGRDRPGLLSEIFAILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPI 179
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
DDPD L KIK+LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDM+ A+ GS
Sbjct: 180 DDPDRLTKIKQLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMDDADFGS 239
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
AS R KP VT+E+C DKGYT+VNLRCPDRPKLLFD VCTLTDMQYVVYH T+IAE PEA
Sbjct: 240 ASER-KPFVTLENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEAC 298
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEY+IRH+DG+P+SSEAERQRVINCLEAAI+RRTSEG+ LELC EDR GLLSDVTRIFRE
Sbjct: 299 QEYFIRHMDGSPVSSEAERQRVINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRE 358
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP 420
NGLSVTRAEVTTRGSQAVNVFYV D+SG PVK+ETIE+VRKEIGLTIL V DDA+SKSPP
Sbjct: 359 NGLSVTRAEVTTRGSQAVNVFYVTDSSGYPVKNETIEAVRKEIGLTILHVNDDAHSKSPP 418
Query: 421 QESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
QE G FSLGN+FRSRSEKFLYNLGLI+S S
Sbjct: 419 QERGLFSLGNIFRSRSEKFLYNLGLIRSYS 448
>gi|449468820|ref|XP_004152119.1| PREDICTED: uncharacterized protein LOC101215960 [Cucumis sativus]
Length = 449
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/451 (82%), Positives = 411/451 (91%), Gaps = 3/451 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MD W+S V DE++KLV+RMNPPRV++DNTS+RKATLIKVDS+N+ GSLLE+VQVL DL
Sbjct: 1 MDSWAS-LPVHDEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDL 59
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+LIIRRAYISSDGEWFMDVFHVTDQNG KL +D V ERIQQSLGPRARSFRSLRRSVGVQ
Sbjct: 60 NLIIRRAYISSDGEWFMDVFHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQ 119
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
AA EHTTIEL+GRDRPGLLSEVFAVL+DLKCNV+ AEVWTHNSRMASVVYIT + +G+PI
Sbjct: 120 AAAEHTTIELSGRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPI 179
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
DDPD LAKIK+LLLYVLKGDRDK SANTAVS++STHKERRLHQMMYADRD+D+NY S S
Sbjct: 180 DDPDWLAKIKQLLLYVLKGDRDKHSANTAVSMNSTHKERRLHQMMYADRDFDLNYT-SCS 238
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
S +S+PLVTVE+C +KGYTVVNLRCPDRPKLLFD VCTLTDMQYVVYHAT+IAE PEAY
Sbjct: 239 ESYQSRPLVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAY 298
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEY+IRHVDG+PISSEAERQRVI+CLEAAI+RRT+EGI LELC EDR GLL+DVTRIFRE
Sbjct: 299 QEYFIRHVDGSPISSEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRE 358
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDD-AYSKSP 419
NGLSVTRAEVTTRG+QAVNVFYV DASGN V+SETI++VR+ IGLTIL VKDD SK P
Sbjct: 359 NGLSVTRAEVTTRGTQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKDDEQQSKCP 418
Query: 420 PQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
PQE FSLGNLFRSRSEK LYNLGLIKSCS
Sbjct: 419 PQEGSGFSLGNLFRSRSEKVLYNLGLIKSCS 449
>gi|449484676|ref|XP_004156949.1| PREDICTED: uncharacterized LOC101215960 [Cucumis sativus]
Length = 449
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/451 (82%), Positives = 410/451 (90%), Gaps = 3/451 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MD W+S V DE++KLV+RMNPPRV++DNTS+RKATLIKVDS+N+ GSLLE+VQVL DL
Sbjct: 1 MDSWAS-LPVHDEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDL 59
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+LIIRRAYISSDGEWFMDV HVTDQNG KL +D V ERIQQSLGPRARSFRSLRRSVGVQ
Sbjct: 60 NLIIRRAYISSDGEWFMDVLHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQ 119
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
AA EHTTIEL+GRDRPGLLSEVFAVL+DLKCNV+ AEVWTHNSRMASVVYIT + +G+PI
Sbjct: 120 AAAEHTTIELSGRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPI 179
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
DDPD LAKIK+LLLYVLKGDRDK SANTAVS++STHKERRLHQMMYADRD+D+NY S S
Sbjct: 180 DDPDWLAKIKQLLLYVLKGDRDKHSANTAVSMNSTHKERRLHQMMYADRDFDLNYT-SCS 238
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
S +S+PLVTVE+C +KGYTVVNLRCPDRPKLLFD VCTLTDMQYVVYHAT+IAE PEAY
Sbjct: 239 ESYQSRPLVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAY 298
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEY+IRHVDG+PISSEAERQRVI+CLEAAI+RRT+EGI LELC EDR GLL+DVTRIFRE
Sbjct: 299 QEYFIRHVDGSPISSEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRE 358
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDD-AYSKSP 419
NGLSVTRAEVTTRG+QAVNVFYV DASGN V+SETI++VR+ IGLTIL VKDD SK P
Sbjct: 359 NGLSVTRAEVTTRGTQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKDDEQQSKCP 418
Query: 420 PQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
PQE FSLGNLFRSRSEK LYNLGLIKSCS
Sbjct: 419 PQEGSGFSLGNLFRSRSEKVLYNLGLIKSCS 449
>gi|356568931|ref|XP_003552661.1| PREDICTED: uncharacterized protein LOC100816426 [Glycine max]
Length = 450
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/450 (82%), Positives = 403/450 (89%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCW S + DEFEKLV+RMNPPRV VDN S+ T+IKVDSANKRGSLLE+VQVL D+
Sbjct: 1 MDCWYSPHPLHDEFEKLVIRMNPPRVAVDNISSGTDTVIKVDSANKRGSLLEVVQVLTDM 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+L +RRAYISSDGEWFMDVFHVTDQNG K +DDV++RIQQSLGPRA SFRSLRRSVGVQ
Sbjct: 61 NLSVRRAYISSDGEWFMDVFHVTDQNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQ 120
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
A EHTTIELTGRDRPGLLSEVFAVL+DLKCNV+ AEVWTHNSRMASVVYIT EATGL I
Sbjct: 121 AEAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSI 180
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
DDPD LAKIK+LLLYVLKGD DK+SANTAVSV STHK+RRLHQ+MYADRDYD++ +SGS
Sbjct: 181 DDPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQLMYADRDYDVDDGDSGS 240
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
S R+K LVTV+ C DKGYTVVNLRCPDRPKLLFD VCTLTDMQYVVYH TVIAE PEAY
Sbjct: 241 TSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAY 300
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEYYIRHVDG+PISSEAERQRVI+CLEAA++RRTSEGI LELC EDR GLLSDVTRIFRE
Sbjct: 301 QEYYIRHVDGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELCGEDRVGLLSDVTRIFRE 360
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP 420
NGLSV RAEVTTRGSQA+NVFYV D SGNPVKSETIE+VRKEIGLTIL VKDD SK PP
Sbjct: 361 NGLSVNRAEVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEIGLTILHVKDDVCSKPPP 420
Query: 421 QESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
QESG+FSL NLFRS SEKFLYNLGL+KS S
Sbjct: 421 QESGKFSLSNLFRSSSEKFLYNLGLMKSYS 450
>gi|224075527|ref|XP_002304667.1| predicted protein [Populus trichocarpa]
gi|222842099|gb|EEE79646.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/450 (82%), Positives = 408/450 (90%), Gaps = 2/450 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCWS + DEFEKLV+RMNPPRVTVDN S+R ATLI+VDSANKRGSLLE+VQVL DL
Sbjct: 1 MDCWSP-LTMDDEFEKLVIRMNPPRVTVDNASSRTATLIEVDSANKRGSLLEVVQVLTDL 59
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+L+IRRAYISSDGEWFMDVFHVTDQ+GNKLSEDDV+ERIQQSLGPR SFRSLRRSV VQ
Sbjct: 60 NLLIRRAYISSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRGPSFRSLRRSVDVQ 119
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
A EHTTIELTGRDRPGLLSE+FAVL+ LKCNV+ +E+WTHNSRMASVVYIT EATGLPI
Sbjct: 120 GAAEHTTIELTGRDRPGLLSEIFAVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPI 179
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
DDPD L KIK+LLL +L GDRDKRSANTAVSV STHKERRLHQMMYADRDYD++ A+ S
Sbjct: 180 DDPDRLTKIKQLLLCILIGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDVDDADCSS 239
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
AS R++ VTVE+C DKGYTVVNLRCPDRPKL+FD VCTLTDMQYVVYHA +IAE PEA
Sbjct: 240 ASERNR-FVTVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEAC 298
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEY+IRH+DG+PI+SEAERQR+INCLEAAI+RRTSEG+ LELC EDR GLLSDVTRIFRE
Sbjct: 299 QEYFIRHMDGSPINSEAERQRLINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRE 358
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP 420
NGLSVTRAEVTTRGSQAVNVF+V D+SG+PVKSETIE+VRKEIGLTIL V DDAYSKSPP
Sbjct: 359 NGLSVTRAEVTTRGSQAVNVFFVTDSSGHPVKSETIEAVRKEIGLTILNVNDDAYSKSPP 418
Query: 421 QESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
QE G SLGN+FRS+SEKFLY+LGLIKS S
Sbjct: 419 QERGLLSLGNIFRSKSEKFLYHLGLIKSNS 448
>gi|357502937|ref|XP_003621757.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
gi|355496772|gb|AES77975.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
Length = 451
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/451 (79%), Positives = 401/451 (88%), Gaps = 1/451 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MD W+SS + DEFEKLV+RMNPPRVTVDNTS+R TLIKVDSANKRGSLLE+VQVL D+
Sbjct: 1 MDFWTSSLPLDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDM 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+LI+RRAYISSDG WFMDVFHVTDQNG K+ ++DV++RIQQSLGPR RSFRS+RRSVGVQ
Sbjct: 61 NLIVRRAYISSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQ 120
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
AA EHTTIELTGRDRPGLLSEVFA+L+DLKCNV+ AEVWTHNSRMASVVYIT + TGLPI
Sbjct: 121 AAAEHTTIELTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPI 180
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAE-SG 239
D+PD LAKIK LLLYVL+GD DK++ANTAVS STHK+RRLHQ+MYADRDYD+ + S
Sbjct: 181 DNPDRLAKIKHLLLYVLRGDIDKKNANTAVSFCSTHKDRRLHQLMYADRDYDIYDGDYSC 240
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
S + R+K VTV+ C DKGYTVVNLRCPDRPKLLFD VCT+TDMQYVVYH TV AE PEA
Sbjct: 241 STNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEA 300
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFR 359
YQEYYIRHVDG PISSEAERQRVI+CLEAA++RRTSEG+ LEL EDR GLLSDVTRIFR
Sbjct: 301 YQEYYIRHVDGYPISSEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRIFR 360
Query: 360 ENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP 419
ENGLSV RAEVTTRGSQA+NVFYV D SGNPVKSETIE+VRKEIGLTILRVKDD KSP
Sbjct: 361 ENGLSVCRAEVTTRGSQAMNVFYVTDVSGNPVKSETIEAVRKEIGLTILRVKDDPCLKSP 420
Query: 420 PQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+ESG+FSL +L RSRSE+FLYNLGL+KS S
Sbjct: 421 TRESGKFSLRDLVRSRSERFLYNLGLMKSSS 451
>gi|356502450|ref|XP_003520032.1| PREDICTED: uncharacterized protein LOC100798999 [Glycine max]
Length = 556
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/429 (82%), Positives = 384/429 (89%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFH 81
+P V VDN S+R T+IKVDSANKRGSLLE+VQVL D++L +RRAYISSDGEWFMDVFH
Sbjct: 128 DPVLVAVDNISSRTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFH 187
Query: 82 VTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSE 141
VTD NG K +DDV++RIQQSLGPRA SFRSLRRSVGVQA EHTTIELTGRDRPGLLSE
Sbjct: 188 VTDPNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSE 247
Query: 142 VFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDR 201
VFAVL+DLKCNV+ AEVWTHNSRMASVVYIT EATGL IDDPD LAKIK+LLLYVLKGD
Sbjct: 248 VFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDI 307
Query: 202 DKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTV 261
DK+SANTAVSV STHK+RRLHQ+MYADRDYD++ +SGS S R+K LVTV+ C DKGYTV
Sbjct: 308 DKKSANTAVSVGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDKGYTV 367
Query: 262 VNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQR 321
VNLRCPDRPKLLFD VCTLTDMQYVVYH TVIAE PEAYQEYYIRHVDG+PISSEAERQR
Sbjct: 368 VNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQR 427
Query: 322 VINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVF 381
VI+CLEAAI+RRTSEGI LELC EDR GLLSDVTRIFRENGLSV RAEVTTRG+QA+NVF
Sbjct: 428 VIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGTQAMNVF 487
Query: 382 YVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRFSLGNLFRSRSEKFLY 441
YV D SGNPV SETIE+VRKEIGLTIL VKDD SK PPQESG+FSL NLFRS SEKFLY
Sbjct: 488 YVTDVSGNPVNSETIEAVRKEIGLTILHVKDDVCSKPPPQESGKFSLSNLFRSSSEKFLY 547
Query: 442 NLGLIKSCS 450
NLGL+KS S
Sbjct: 548 NLGLMKSYS 556
>gi|217073154|gb|ACJ84936.1| unknown [Medicago truncatula]
Length = 387
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 308/386 (79%), Positives = 343/386 (88%), Gaps = 1/386 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MD W+SS + DEFEKLV+RMNPPRVTVDNTS+R TLIKVDSANKRGSLLE+VQVL D+
Sbjct: 1 MDFWTSSLPLDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDM 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+LI+RRAYISSDG WFMDVFHVTDQNG K+ ++DV++RIQQSLGPR RSFRS+RRSVGVQ
Sbjct: 61 NLIVRRAYISSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQ 120
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
AA EHTTIELTGRDRPGLLSEVFA+L+DLKCNV+ AEVWTHNSRMASVVYIT + TGLPI
Sbjct: 121 AAAEHTTIELTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPI 180
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAE-SG 239
D+PD L KIK LLLYVL+GD DK++ANTAVS STHK+RRLHQ+MYADRDYD+ + S
Sbjct: 181 DNPDRLTKIKHLLLYVLRGDIDKKNANTAVSFCSTHKDRRLHQLMYADRDYDIYDGDYSC 240
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
S + R+K VTV+ C DKGYTVVNLRCPDRPKLLFD VCT+TDMQYVVYH TV AE PEA
Sbjct: 241 STNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEA 300
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFR 359
YQEYYIRHVDG PISSEAERQRVI+CLEAA++RRTSEG+ LEL EDR GLLSDVTRIFR
Sbjct: 301 YQEYYIRHVDGYPISSEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRIFR 360
Query: 360 ENGLSVTRAEVTTRGSQAVNVFYVVD 385
ENGLSV RAEVTTRGSQA+NVFYV D
Sbjct: 361 ENGLSVCRAEVTTRGSQAMNVFYVTD 386
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 283/453 (62%), Positives = 348/453 (76%), Gaps = 7/453 (1%)
Query: 5 SSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLII 64
S S +VDEF+KLV+ MNPPRVTVDNTS+ ATL+KVDSANK G+LLE+VQVL DL L I
Sbjct: 6 SRSNEIVDEFQKLVINMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTDLKLAI 65
Query: 65 RRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALE 124
RAYISSDGEWFMDVFHV D+ GNKL + V +RI+QSLG + SFR R VGV+A E
Sbjct: 66 NRAYISSDGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRGTDRCVGVEAEAE 125
Query: 125 --HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
T IEL GRDRPGLLSEVFAVL++LKCN+ +EVWTH+ RMA+++Y+T TG I++
Sbjct: 126 AAQTVIELIGRDRPGLLSEVFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEE 185
Query: 183 PDTLAKIKRLLLYVLKGD-RDKRSANTAVSVDST--HKERRLHQMMYADRDYDMNYAESG 239
P+ L +KRLL +VL+G RDK++A A+S + H +RRLHQMM+ADR +
Sbjct: 186 PERLDTVKRLLRHVLRGSSRDKKAARAAISARAAAPHAQRRLHQMMHADRGVHRADGDDA 245
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
A RS P+V VE C ++GYT+VN+RC DRPKLLFD VCTLTDMQY+V+H TVIAE EA
Sbjct: 246 VADDRSLPVVVVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYLVFHGTVIAEGSEA 305
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFR 359
YQEYYIRH+D +S+ +R+++ CLEAAI+RR +EG+ LELCCEDR GLLSDVTRIFR
Sbjct: 306 YQEYYIRHLDDGAAASDEDREQLRRCLEAAIQRRNTEGLGLELCCEDRVGLLSDVTRIFR 365
Query: 360 ENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP 419
E+GLSVT AEV TRG +A NVFYVV ASG PV+++ +E+VR EIG IL VK+DA +
Sbjct: 366 EHGLSVTHAEVATRGERAANVFYVVTASGMPVQAQAVEAVRAEIGDEILLVKEDAAAPKS 425
Query: 420 P--QESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
P ++ G SLGN+ RSRSEKFLYNLGLI+SCS
Sbjct: 426 PLGRDGGGRSLGNMIRSRSEKFLYNLGLIRSCS 458
>gi|294464028|gb|ADE77534.1| unknown [Picea sitchensis]
Length = 439
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/439 (62%), Positives = 338/439 (76%), Gaps = 9/439 (2%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVF 80
MN PRV +DN ATL+KVDSANK G LLE VQVL DL L I +A +SSDG WFMDVF
Sbjct: 1 MNSPRVVIDNAVCGNATLVKVDSANKHGILLEAVQVLTDLKLNINKANVSSDGRWFMDVF 60
Query: 81 HVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ-AALEHTTIELTGRDRPGLL 139
+VTD+NG KL+++ V I+++L S +SVGV+ AA +HT IELTG DRPGLL
Sbjct: 61 YVTDENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDRPGLL 120
Query: 140 SEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKG 199
SE+FAVLSDLKCNV+ AEVWTHN R+A +VY+T E TG PIDD + KI+ LL V++G
Sbjct: 121 SEIFAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPIDDGQKICKIEELLRNVMRG 180
Query: 200 DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA------SGRSKPLVTVES 253
+ + R A T S+ TH ERRLHQ+M+ADRDY+ G A + +KP VTVE+
Sbjct: 181 NSNIRGAKTVASMGLTHTERRLHQLMFADRDYEKLDGTVGRAPPPLNDNDNAKPHVTVEN 240
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
C ++GY+VVN++C DRPKLLFD VCTLTDM+YVV+HAT+ ++ P+ +QEYYIRH DG P+
Sbjct: 241 CLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIRHTDGCPV 300
Query: 314 SSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTR 373
+SEAERQRVI CLEAAI+RR SEG+ LELC DR GLLSDVTRIFRENG+SVTRAEV+TR
Sbjct: 301 NSEAERQRVIQCLEAAIRRRASEGVRLELCTNDRVGLLSDVTRIFRENGMSVTRAEVSTR 360
Query: 374 GSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAY-SKSPPQESG-RFSLGNL 431
G +AVNVFYV DA+GNPV +T+E+VR+EIGLTIL+VKD+ +KSP +E FS GNL
Sbjct: 361 GDKAVNVFYVTDAAGNPVDPKTVEAVRREIGLTILQVKDNCMDTKSPRREPAIPFSFGNL 420
Query: 432 FRSRSEKFLYNLGLIKSCS 450
F+S+SE+FLY+LGLIKS S
Sbjct: 421 FKSKSERFLYSLGLIKSYS 439
>gi|242082077|ref|XP_002445807.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
gi|241942157|gb|EES15302.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
Length = 476
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/461 (61%), Positives = 335/461 (72%), Gaps = 20/461 (4%)
Query: 10 VVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI 69
+VDE++KLVLRMNPPRVTVDN S+ ATL+KVDS NK G+LLE+VQVL DL L I RAYI
Sbjct: 16 IVDEYQKLVLRMNPPRVTVDNDSDMTATLVKVDSVNKYGTLLEVVQVLTDLKLTINRAYI 75
Query: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALE---HT 126
SSDGEWFMDVFHV DQ+GNKL + V +RI+QSLG + SFR + A T
Sbjct: 76 SSDGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQT 135
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTL 186
TIEL GRDRPGLLSEVFAVL+DLKCN++ +EVWTH+ R+A++VY+T T I+DP L
Sbjct: 136 TIELVGRDRPGLLSEVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDPARL 195
Query: 187 AKIKRLLLYVLKGD-RDKRSANTAVSVDSTHKERRLHQMMYADRDY------DMNYAESG 239
+KRLL +VL+G RDK+++ A+S H RRLHQMM ADR E G
Sbjct: 196 DTVKRLLRHVLRGSSRDKKASRAAISPGVEHAPRRLHQMMQADRTARREVGDGEGVGERG 255
Query: 240 SASGRSK--PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP 297
ASG P+V VE C ++GYT+VN+RC DRPKLLFD VCTLTDMQYVV+H TVIAE
Sbjct: 256 EASGAGGGMPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGS 315
Query: 298 EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRI 357
EAYQEYYIRH+D + S +R R+ CLEAAI+RR +EG+ LELCCEDR GLLSDVTRI
Sbjct: 316 EAYQEYYIRHLDDSTGGSGEDRDRLCRCLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRI 375
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDD---- 413
FRE+GLSVT AEV TRG+QA NVFYVVDASG PV+ +++VR EIG L V++
Sbjct: 376 FREHGLSVTHAEVDTRGAQAANVFYVVDASGEPVQGHAVDAVRAEIGEQFLFVREQHDAA 435
Query: 414 ----AYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
A KSP GR SLGN+ RSRSEKFLYNLGLI+SCS
Sbjct: 436 AGAGAGPKSPVGGGGRRSLGNMIRSRSEKFLYNLGLIRSCS 476
>gi|218201514|gb|EEC83941.1| hypothetical protein OsI_30028 [Oryza sativa Indica Group]
Length = 467
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 285/467 (61%), Positives = 348/467 (74%), Gaps = 17/467 (3%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
M C S S VVDEFEKLV+RMNPPRVTVDNTS+ ATL+KVDSANK G+LLE+VQVL +L
Sbjct: 1 MACGSPSTEVVDEFEKLVIRMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTEL 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSL-RRSVGV 119
L I+RAYISSDGEWFMDVFHV DQ+GNKL + V +RI+ SLG + SFR+ RSV V
Sbjct: 61 KLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEV 120
Query: 120 QAALE--HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
+A T IEL G+DRPGLLSEVFAVL+DLKCN++ +EVWTH++RMA++V++T T
Sbjct: 121 EAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTL 180
Query: 178 LPIDDPDTLAKIKRLLLYVLKGD----RDKR-SANTAVSVD-----STHKERRLHQMMYA 227
IDD D L +KRLL ++L+G RD++ +A + + H RRLHQMM+
Sbjct: 181 GAIDDQDRLDTVKRLLRHLLRGGGAGARDRKDTARADIPAPRRDGAAAHAPRRLHQMMHD 240
Query: 228 DRDY--DMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQY 285
DR + SG GR +P+V V C ++GYT+VN+RC DRPKLLFD VCTLTDMQY
Sbjct: 241 DRAAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQY 300
Query: 286 VVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCE 345
VV+H TVIAE EAYQEYYIRH+D +P++S ER R+ CLEAAI+RR +EG+ LELCCE
Sbjct: 301 VVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELCCE 360
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLSDVTRIFRE+GLSVT AEV TRG++A NVFYVV ASG PV++ +E+VR EIG
Sbjct: 361 DRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGE 420
Query: 406 TILRVKDDAYSKSP--PQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+L V++DA P P R SLGN+ RSRSEKFLYNLGLI+SCS
Sbjct: 421 QVLFVREDAGGGEPRSPPGRDRRSLGNMIRSRSEKFLYNLGLIRSCS 467
>gi|224108635|ref|XP_002314917.1| predicted protein [Populus trichocarpa]
gi|222863957|gb|EEF01088.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/441 (60%), Positives = 331/441 (75%), Gaps = 8/441 (1%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL R+NPPRV +DN + + AT+I+VDSANK G LLE+VQVL DL+LII +AYISS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYISS 68
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTD +GNK++++ + + I +SLGP + F S RSVGV+ +++HT IELT
Sbjct: 69 DGGWFMDVFNVTDPDGNKVTDEAILDYITKSLGPES-CFTSSMRSVGVKQSMDHTAIELT 127
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+ LKCNV+ AEVWTHN R A+V+ +T E TG I DP+ L++IK
Sbjct: 128 GSDRPGLLSEVSAVLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLSRIKE 187
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTV 251
LL VLKG R A T VS TH ERRLHQMM+ADRDY+ A + + +P V+V
Sbjct: 188 LLCNVLKGSNKSRGAKTVVSHGVTHTERRLHQMMFADRDYER--ANNDELDEKQRPNVSV 245
Query: 252 ESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGN 311
+ +K Y+VV + DRPKLLFD VCTLTDM+YVV+HA + AE PEA+QEYYI+H+DG+
Sbjct: 246 VNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKHIDGS 305
Query: 312 PISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVT 371
P+ SEAERQR+I CLEAAI+RR SEG+ LELC DR GLLSDVTRIFREN L+VTRAEVT
Sbjct: 306 PVKSEAERQRIIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVT 365
Query: 372 TRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP-PQES-GRFSLG 429
TR +AVN FYV DASG PV ++TI+S+R+ IG TIL+VK + P QES RF G
Sbjct: 366 TRAGKAVNTFYVSDASGYPVDAKTIDSIRQAIGQTILKVKSSPEEQKPVSQESPTRFLFG 425
Query: 430 NLFRSRSEKFLYNLGLIKSCS 450
LF+SRS N GL++S S
Sbjct: 426 GLFKSRS---FVNFGLVRSYS 443
>gi|294460934|gb|ADE76039.1| unknown [Picea sitchensis]
Length = 454
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/445 (58%), Positives = 329/445 (73%), Gaps = 11/445 (2%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+FE L R++PP V +DN + +L+KV+SAN+ G LLE+VQVL DLDLII +AYISSD
Sbjct: 12 DFESLNQRIHPPMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLDLIISKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-----LRRSVGVQAALEHTT 127
G WFMDVFHVTDQ GNKL++ + + IQQ+LG + + L R+VGVQ+ EHT
Sbjct: 72 GRWFMDVFHVTDQLGNKLTDQRIIDYIQQALGAKQGGSTTEVKTCLGRTVGVQSIGEHTA 131
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELTG DRPGLLSE+ AVL++LKCNV+ AEVWTHN R+A VVY+T E+T PI++P+ LA
Sbjct: 132 IELTGTDRPGLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDESTSRPIEEPEQLA 191
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
IK L VLKG+ D+R T S+ TH ERRLHQMM+ADRDY+ S +GR P
Sbjct: 192 AIKEQLSNVLKGNDDRRGVKTDFSMGLTHTERRLHQMMFADRDYEGPDTRSLGENGR--P 249
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
++ +E+C +KGY+VV + C DRPKLLFD VCTLTDMQYVV HAT+ + A QEYYIRH
Sbjct: 250 IIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGTYALQEYYIRH 309
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
+DG + +E E+QRVI CLEAAI+RR SEG+ LELC DR GLLSD+TRIFRENGLSVTR
Sbjct: 310 MDGCTLDTEGEKQRVIKCLEAAIERRVSEGVRLELCTSDRVGLLSDITRIFRENGLSVTR 369
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP-PQESG-- 424
A+VTTR +AVNVFYV D SGNPV + +E++R+EIG TIL+VK S P P ++G
Sbjct: 370 ADVTTRADKAVNVFYVTDTSGNPVDMKIVEAMRREIGHTILQVKSIPSSPRPCPTDTGDK 429
Query: 425 -RFSLGNLFRSRSEKFLYNLGLIKS 448
+FS G+L +S+ E+ YN GLIKS
Sbjct: 430 AKFSFGSLLKSQLERLSYNFGLIKS 454
>gi|356499934|ref|XP_003518790.1| PREDICTED: uncharacterized protein LOC100813551 isoform 1 [Glycine
max]
Length = 449
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/446 (60%), Positives = 334/446 (74%), Gaps = 17/446 (3%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL RMNPPRV +DN + + AT+I+VDSANK G LLE+VQ+L DL+LII +AYISS
Sbjct: 14 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 73
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VT Q+GNK++++ + + I++SLGP + S RSVGV+ ++HT IEL
Sbjct: 74 DGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPES-CVTSPMRSVGVKQTMDHTAIELM 132
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL++LKCN++ AEVWTHN+R A+V+++T E TG I DP L+ IK
Sbjct: 133 GTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIKE 192
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDY-----DMNYAESGSASGRSK 246
LL VL G KR A T V+ ++TH ERRLHQMM+ADRDY D ++AE + +
Sbjct: 193 LLCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYERVNDDDDFAE------KQR 246
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V V + +DK Y+VV ++C DRPKLLFD VCTLTDMQYVV+HA + AE PEAYQEYYI+
Sbjct: 247 PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIK 306
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H+DG+P+ S+AERQRVI CL AAI+RR SEG+ LELC DR GLLSDVTRIFREN L+VT
Sbjct: 307 HIDGSPVKSDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVT 366
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYS-KSPPQESGR 425
RAEV T+G +AVN FYV ASG PV S+TIES+R+ IG TIL+VK KS PQ+S
Sbjct: 367 RAEVATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPT 426
Query: 426 FSL-GNLFRSRSEKFLYNLGLIKSCS 450
SL LF+SRS N GL+KS S
Sbjct: 427 RSLFSGLFKSRS---FVNFGLVKSYS 449
>gi|42761392|dbj|BAD11660.1| uridylyl transferase-like [Oryza sativa Japonica Group]
Length = 475
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 285/475 (60%), Positives = 348/475 (73%), Gaps = 25/475 (5%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIK--------VDSANKRGSLLE 52
M C S S VVDEFEKLV+RMNPPRVTVDNTS+ ATL+K VDSANK G+LLE
Sbjct: 1 MACGSPSTEVVDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLE 60
Query: 53 LVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS 112
+VQVL +L L I+RAYISSDGEWFMDVFHV DQ+GNKL + V +RI+ SLG + SFR+
Sbjct: 61 VVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRA 120
Query: 113 L-RRSVGVQAALE--HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVV 169
RSV V+A T IEL G+DRPGLLSEVFAVL+DLKCN++ +EVWTH++RMA++V
Sbjct: 121 PPERSVEVEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALV 180
Query: 170 YITSEATGLPIDDPDTLAKIKRLLLYVLKGD----RDKRS-ANTAVSVD-----STHKER 219
++T T IDD D L +KRLL ++L+G RD+++ A A+ + H R
Sbjct: 181 HVTDADTLGAIDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPR 240
Query: 220 RLHQMMYADRDY--DMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAV 277
RLHQMM+ DR + SG GR +P+V V C ++GYT+VN+RC DRPKLLFD V
Sbjct: 241 RLHQMMHDDRAAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTV 300
Query: 278 CTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEG 337
CTLTDMQYVV+H TVIAE EAYQEYYIRH+D +P++S ER R+ CLEAAI+RR +EG
Sbjct: 301 CTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEG 360
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+ LEL CEDR GLLSDVTRIFRE+GLSVT AEV TRG++A NVFYVV ASG PV++ +E
Sbjct: 361 LRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVE 420
Query: 398 SVRKEIGLTILRVKDDAYSKSP--PQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+VR EIG +L V++DA P P R SLGN+ RSRSEKFLYNLGLI+SCS
Sbjct: 421 AVRAEIGEQVLFVREDAGGGEPRSPPGRDRRSLGNMIRSRSEKFLYNLGLIRSCS 475
>gi|255541934|ref|XP_002512031.1| amino acid binding protein, putative [Ricinus communis]
gi|223549211|gb|EEF50700.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/441 (60%), Positives = 331/441 (75%), Gaps = 8/441 (1%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL R+NPPRV +DN S + AT+I+VDSANK G LLE+VQVL DL+LII +AYISS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNESCKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYISS 68
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+V DQ+GNK++++ + + I++SLGP +R F S RSVGV +++HT+IELT
Sbjct: 69 DGGWFMDVFNVRDQDGNKITDEAILDYIRKSLGPESR-FTSSMRSVGVIPSMDHTSIELT 127
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+ LKCNV+ AEVWTHN R A+V+ +T E TG I DP+ L++IK
Sbjct: 128 GSDRPGLLSELSAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRIKE 187
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTV 251
LL VLKG R A T VS TH ERRLHQMM+ADRDY+ A+ + +P V+V
Sbjct: 188 LLCNVLKGSNKFRGAKTVVSHGVTHTERRLHQMMFADRDYER--ADDEVLDEKQRPNVSV 245
Query: 252 ESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGN 311
+ DK Y+VV +R DRPKLLFD VCTLTDM+YVV+HA + AE PEAYQEYYIRH+DG+
Sbjct: 246 VNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIRHIDGS 305
Query: 312 PISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVT 371
P+ S+AER RVI CLEAAI+RR SEG+ LELC DR GLLSDVTRIFREN L+VTRAEVT
Sbjct: 306 PVKSDAERMRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVT 365
Query: 372 TRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP-PQES-GRFSLG 429
TR +A+N FYV DASG V +TIES+R+ IG TIL+VK + P QES RF G
Sbjct: 366 TRDGKAINTFYVRDASGYLVDGKTIESIRQVIGQTILKVKSNPDELKPVSQESPTRFLFG 425
Query: 430 NLFRSRSEKFLYNLGLIKSCS 450
LF+SRS N GL++S S
Sbjct: 426 GLFKSRS---FVNFGLVRSYS 443
>gi|293332811|ref|NP_001169709.1| hypothetical protein [Zea mays]
gi|224031079|gb|ACN34615.1| unknown [Zea mays]
gi|413921674|gb|AFW61606.1| hypothetical protein ZEAMMB73_976911 [Zea mays]
Length = 473
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 286/476 (60%), Positives = 341/476 (71%), Gaps = 29/476 (6%)
Query: 1 MDCWSSS---FAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVL 57
M C S S VDE+EKLVLRMNPPRVTVDN S+ ATL+KVDSANK G+LLE+VQVL
Sbjct: 1 MACGSRSRRTSETVDEYEKLVLRMNPPRVTVDNDSDMTATLVKVDSANKYGTLLEVVQVL 60
Query: 58 NDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSV 117
DL L I RAYISSDGEWFMDVFHV DQ+GNKL + V +RI+QSLG + SFR +
Sbjct: 61 TDLKLTINRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERL 120
Query: 118 ---GVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
+A TTIEL GRDRPGLLSEVFAVL+DL+CNV+ +EVWTH+ R+A++V++T
Sbjct: 121 VAVEAEAEEAQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDA 180
Query: 175 ATGLPIDDPDTLAKIKRLLLYVLKG-DRDKRSANTAVSVDST-HKERRLHQMMYADRD-- 230
T IDDP L +KRLL +VL+G RDK++A AVS H RRLHQMM ADR
Sbjct: 181 DTLGAIDDPARLDTVKRLLRHVLRGSSRDKKAARAAVSSARVEHAPRRLHQMMQADRSAR 240
Query: 231 ---------YDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLT 281
+ S +G P+V VE C ++GYT+VN+RC DRPKLLFD VCTLT
Sbjct: 241 REGGGDGDGEEERERGEASGNGNGVPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLT 300
Query: 282 DMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLE 341
DMQYVV+H TVIAE EAYQEYYIRH+D SS +R R+ LEAAI+RR +EG+ LE
Sbjct: 301 DMQYVVFHGTVIAEGSEAYQEYYIRHLDD---SSGEDRDRLCRGLEAAIQRRCTEGLRLE 357
Query: 342 LCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE-TIESVR 400
LCCEDR GLLSDVTRIFRE+GLSVT AEV TRG++A NVFYVVDASG PV+++ +++VR
Sbjct: 358 LCCEDRVGLLSDVTRIFREHGLSVTHAEVETRGARAANVFYVVDASGEPVQAQAAVDAVR 417
Query: 401 KEIGLTILRV----KDDAYS--KSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
EIG +L + + DA KSP GR SLGN+ RSRSEKFLYNLGLI+SCS
Sbjct: 418 AEIGEQVLLLVREQQQDAAGGPKSPAGAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 473
>gi|224101597|ref|XP_002312346.1| predicted protein [Populus trichocarpa]
gi|222852166|gb|EEE89713.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/441 (59%), Positives = 329/441 (74%), Gaps = 8/441 (1%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL R+NPPRV +DN + + AT+I+VDSANK G LLE+VQVL DL+LII +AY+SS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGKLLEVVQVLTDLNLIITKAYVSS 68
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++ + + I +SLG + F S S GV+ +++HT IELT
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEAILDYITKSLGTES-CFTSSMGSFGVKQSIDHTAIELT 127
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+ LKCNV+ AEVWTHN R A+V+ +T + TG I DP+ L+++K
Sbjct: 128 GSDRPGLLSEVSAVLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRVKE 187
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTV 251
LL VLKG R A T VS TH ERRLHQMM+ADRDY+ A + + +P V+V
Sbjct: 188 LLCNVLKGSNKYRGARTVVSHGVTHTERRLHQMMFADRDYER--ANNDVLDEKQRPNVSV 245
Query: 252 ESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGN 311
+ +K Y+V+ +R DRPKLLFD VCTLTDM+YVV+HA + AE PEA+QEYYI+HVDG+
Sbjct: 246 VNWYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKHVDGS 305
Query: 312 PISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVT 371
P+ SEAERQR+I CLEAAI+RR SEG+ LELC +DR GLLSDVTRIFREN L+VTRAEVT
Sbjct: 306 PVKSEAERQRIIQCLEAAIERRVSEGLKLELCTKDRIGLLSDVTRIFRENSLTVTRAEVT 365
Query: 372 TRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP-PQES-GRFSLG 429
TR +AVN FYV DASG PV ++TI+S+R+ G TIL+VK P QES RF G
Sbjct: 366 TRAGKAVNTFYVSDASGYPVDAKTIDSIRQATGQTILKVKGSPEELKPVSQESPTRFLFG 425
Query: 430 NLFRSRSEKFLYNLGLIKSCS 450
LF+SRS N GL+KS S
Sbjct: 426 GLFKSRS---FVNFGLVKSYS 443
>gi|356495189|ref|XP_003516462.1| PREDICTED: uncharacterized protein LOC100787134 [Glycine max]
Length = 449
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/441 (59%), Positives = 329/441 (74%), Gaps = 7/441 (1%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL RMNPPRV +DN + + AT+I+VDSANK G LLE+VQ+L DL+LII +AYISS
Sbjct: 14 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 73
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VT Q+GNK++++ + + I++SLGP + S RSVGV+ +H IEL
Sbjct: 74 DGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPES-CVTSPMRSVGVKQTTDHIAIELM 132
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL++LKCN++ AEVWTHN+R A+V+++T E +G I DP L+ IK
Sbjct: 133 GTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSIIKE 192
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTV 251
LL VL G KR A T V+ ++TH ERRLHQMM+ADRDY+ + + +P V V
Sbjct: 193 LLCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYE-RVNDDDDFDEKQRPNVNV 251
Query: 252 ESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGN 311
+ +DK Y+VV ++C DRPKLLFD VCTLTDMQYVV+HA + AE PEAYQEYYI+H+DG+
Sbjct: 252 VNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHIDGS 311
Query: 312 PISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVT 371
P+ S+AERQRVI CL AAI+RR SEG+ LELC DR GLLSDVTRIFREN L+VTRAEV
Sbjct: 312 PVKSDAERQRVIQCLAAAIQRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVA 371
Query: 372 TRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYS-KSPPQESGRFSL-G 429
T+G +AVN FYV ASG PV S+TIES+R+ IG TIL+VK KS PQ+S SL
Sbjct: 372 TKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTRSLFS 431
Query: 430 NLFRSRSEKFLYNLGLIKSCS 450
LF+SRS N GL+KS S
Sbjct: 432 GLFKSRS---FVNFGLVKSYS 449
>gi|312281803|dbj|BAJ33767.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/454 (57%), Positives = 336/454 (74%), Gaps = 12/454 (2%)
Query: 5 SSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLII 64
S S V DE+EKL+ RMNPPRV +DN S + AT+I+VDSAN+ G LLE+VQ+L DL+L I
Sbjct: 2 SFSQDVDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTI 61
Query: 65 RRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALE 124
+AYISSDG WFMDVF+VTDQ+GNK++++ V + IQ+SLGP A F S R+VGV + +
Sbjct: 62 TKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA-CFSSSMRTVGVIPSTD 120
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T IELTG DRPGLLSE+ AVL+ LKC+V+ AEVWTHN+R A+V+ +T ++TG I DP+
Sbjct: 121 STVIELTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPE 180
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA--S 242
L++IK LL VLKG R A T VS H +RRLHQMM+ DRDY+ + S+
Sbjct: 181 RLSRIKNLLRNVLKGSNTPREAKTVVSQGEVHTDRRLHQMMFEDRDYEHRVVDDDSSIQD 240
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
R +P V V++ DK Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V + EAYQE
Sbjct: 241 ERQRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQE 300
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENG 362
YY+RH+DG+P+ SEAE+QRVI CLEAAIKRR SEG+ LELC DR GLLS+VTRIFREN
Sbjct: 301 YYVRHIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENS 360
Query: 363 LSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-----YSK 417
L+VTRAEV T+G +A+N FYV DASG + ++T++S+R+ IG TIL+VK++ K
Sbjct: 361 LTVTRAEVKTKGGKALNTFYVSDASGYSIDAKTLDSIRQTIGQTILKVKNNPEEQQQRQK 420
Query: 418 SPPQES-GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
SP QES RF G LF+S+S N GL++S S
Sbjct: 421 SPSQESPTRFLFGGLFKSKS---FVNFGLVRSYS 451
>gi|297838675|ref|XP_002887219.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
gi|297333060|gb|EFH63478.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/447 (58%), Positives = 333/447 (74%), Gaps = 12/447 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+EKL+ RMNPPRV +DN S +KAT+I+VDSAN+ G LLE+VQ+L DL+L I +AYISS
Sbjct: 13 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 72
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++ V + IQ+SLGP A F + RSVGV + + T IELT
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA-CFSTSMRSVGVIPSTDSTVIELT 131
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+ LKC+V+ AEVWTHN+R A+V+ +T ++TG I DP+ L++IK
Sbjct: 132 GCDRPGLLSELSAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCGISDPERLSRIKN 191
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA--SGRSKPLV 249
LL VLKG R A T VS H +RRLHQMM+ DRDY+ + S+ R +P V
Sbjct: 192 LLRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDV 251
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
V++ DK Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E EAYQEYY+RH+D
Sbjct: 252 CVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVRHID 311
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G+P+ SEAE+QRVI CLEAAIKRR SEG+ LELC DR GLLS+VTRIFREN L+VTRAE
Sbjct: 312 GSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTSDRVGLLSNVTRIFRENSLTVTRAE 371
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAY-----SKSPPQES- 423
V T+G +A+N FYV DASG + ++TI+S+R+ IG TIL+VK++ KSP ES
Sbjct: 372 VKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESP 431
Query: 424 GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
RF G LF+S+S N GL++S S
Sbjct: 432 TRFLFGGLFKSKS---FVNFGLVRSYS 455
>gi|115477499|ref|NP_001062345.1| Os08g0533300 [Oryza sativa Japonica Group]
gi|113624314|dbj|BAF24259.1| Os08g0533300 [Oryza sativa Japonica Group]
Length = 498
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/498 (57%), Positives = 348/498 (69%), Gaps = 48/498 (9%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIK-------------------- 40
M C S S VVDEFEKLV+RMNPPRVTVDNTS+ ATL+K
Sbjct: 1 MACGSPSTEVVDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVLDNSCRLIQSI 60
Query: 41 -----------VDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNK 89
VDSANK G+LLE+VQVL +L L I+RAYISSDGEWFMDVFHV DQ+GNK
Sbjct: 61 SWEEFFSQTGEVDSANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNK 120
Query: 90 LSEDDVSERIQQSLGPRARSFRSL-RRSVGVQAALE--HTTIELTGRDRPGLLSEVFAVL 146
L + V +RI+ SLG + SFR+ RSV V+A T IEL G+DRPGLLSEVFAVL
Sbjct: 121 LYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGKDRPGLLSEVFAVL 180
Query: 147 SDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGD----RD 202
+DLKCN++ +EVWTH++RMA++V++T T IDD D L +KRLL ++L+G RD
Sbjct: 181 TDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLLRHLLRGGGAGARD 240
Query: 203 KR-SANTAVSVD-----STHKERRLHQMMYADRDY--DMNYAESGSASGRSKPLVTVESC 254
++ +A A+ + H RRLHQMM+ DR + SG GR +P+V V C
Sbjct: 241 RKATARAAIPAPRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDGGGRGRPVVEVVDC 300
Query: 255 TDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPIS 314
++GYT+VN+RC DRPKLLFD VCTLTDMQYVV+H TVIAE EAYQEYYIRH+D +P++
Sbjct: 301 AERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVT 360
Query: 315 SEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRG 374
S ER R+ CLEAAI+RR +EG+ LEL CEDR GLLSDVTRIFRE+GLSVT AEV TRG
Sbjct: 361 SGDERDRLGRCLEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRG 420
Query: 375 SQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP--PQESGRFSLGNLF 432
++A NVFYVV ASG PV++ +E+VR EIG +L V++DA P P R SLGN+
Sbjct: 421 ARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVLFVREDAGGGEPRSPPGRDRRSLGNMI 480
Query: 433 RSRSEKFLYNLGLIKSCS 450
RSRSEKFLYNLGLI+SCS
Sbjct: 481 RSRSEKFLYNLGLIRSCS 498
>gi|357487953|ref|XP_003614264.1| ACR4 [Medicago truncatula]
gi|355515599|gb|AES97222.1| ACR4 [Medicago truncatula]
Length = 451
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/449 (58%), Positives = 335/449 (74%), Gaps = 10/449 (2%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
+S S + DE+EKL RMNPPRV +DN +++ AT+I+VDSANK+G LLE+VQ+L DL+LI
Sbjct: 11 YSQSHYMDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLI 70
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I +AYISSDG WFMDVF+VTDQ+GNK++++ + + I++SLGP + F + RSVGV+
Sbjct: 71 ITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPES-CFATTMRSVGVKQTP 129
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
+HT IEL G DRPGLLSEV AVL++LKCN++ AEVWTHN R A+V+++T E TG I D
Sbjct: 130 DHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDS 189
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
L+ IK LL VL G KR A T V+ DSTH +RRLHQMM+ DRDY+ +
Sbjct: 190 QRLSLIKELLCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYER--VDDDDFDE 247
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ +P V V + +DK Y+VV + C DRPKL+FD VCTLTDMQYVV+HA + AE P+AYQEY
Sbjct: 248 KQRPNVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEY 307
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YI+H+DG+P+ S+AERQRVI+CLEAAI+RR SEG+ LELC DR GLLS+VTRIFREN L
Sbjct: 308 YIKHIDGSPVKSDAERQRVIHCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSL 367
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD--DAYSKSPPQ 421
+VTRAEVTT+G +AVN FYV ASG V S+TIES+R+ IG TIL+VK ++ + P
Sbjct: 368 TVTRAEVTTKGGKAVNTFYVRGASGCIVDSKTIESIRQTIGNTILKVKGSPESLPQDSPT 427
Query: 422 ESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
S FS LF+SRS N GL+KS S
Sbjct: 428 RSSIFS--GLFKSRS---FVNFGLVKSYS 451
>gi|6730631|gb|AAF27052.1|AC008262_1 F4N2.2 [Arabidopsis thaliana]
Length = 445
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/447 (57%), Positives = 332/447 (74%), Gaps = 12/447 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+EKL+ RMNPPRV +DN S +KAT+I+VDSAN+ G LLE+VQ+L DL+L I +AYISS
Sbjct: 3 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++ V + IQ+SLGP A F + RSVGV + + T IELT
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA-CFSTSMRSVGVIPSTDSTVIELT 121
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+ LKC+V+ AE+WTHN+R A+V+ +T + TG I DP+ L++IK
Sbjct: 122 GCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKN 181
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA--SGRSKPLV 249
LL VLKG R A T VS H +RRLHQMM+ DRDY+ + S+ R +P V
Sbjct: 182 LLRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDV 241
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
V++ DK Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E EA+QEYY+RH+D
Sbjct: 242 CVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHID 301
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G+P+ SEAE+QRVI CLEAAIKRR SEG+ LELC DR GLLS+VTRIFREN L+VTRAE
Sbjct: 302 GSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAE 361
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAY-----SKSPPQES- 423
V T+G +A+N FYV DASG + ++TI+S+R+ IG TIL+VK++ KSP ES
Sbjct: 362 VKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESP 421
Query: 424 GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
RF G LF+S+S N GL++S S
Sbjct: 422 TRFLFGGLFKSKS---FVNFGLVRSYS 445
>gi|15221589|ref|NP_177067.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|22138098|gb|AAM93429.1| ACR4 [Arabidopsis thaliana]
gi|115646770|gb|ABJ17112.1| At1g69040 [Arabidopsis thaliana]
gi|332196757|gb|AEE34878.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 451
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/447 (57%), Positives = 332/447 (74%), Gaps = 12/447 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+EKL+ RMNPPRV +DN S +KAT+I+VDSAN+ G LLE+VQ+L DL+L I +AYISS
Sbjct: 9 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 68
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++ V + IQ+SLGP A F + RSVGV + + T IELT
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA-CFSTSMRSVGVIPSTDSTVIELT 127
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+ LKC+V+ AE+WTHN+R A+V+ +T + TG I DP+ L++IK
Sbjct: 128 GCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKN 187
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA--SGRSKPLV 249
LL VLKG R A T VS H +RRLHQMM+ DRDY+ + S+ R +P V
Sbjct: 188 LLRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDV 247
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
V++ DK Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E EA+QEYY+RH+D
Sbjct: 248 CVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHID 307
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G+P+ SEAE+QRVI CLEAAIKRR SEG+ LELC DR GLLS+VTRIFREN L+VTRAE
Sbjct: 308 GSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAE 367
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAY-----SKSPPQES- 423
V T+G +A+N FYV DASG + ++TI+S+R+ IG TIL+VK++ KSP ES
Sbjct: 368 VKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESP 427
Query: 424 GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
RF G LF+S+S N GL++S S
Sbjct: 428 TRFLFGGLFKSKS---FVNFGLVRSYS 451
>gi|42572033|ref|NP_974107.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332196758|gb|AEE34879.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 455
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/447 (57%), Positives = 332/447 (74%), Gaps = 12/447 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+EKL+ RMNPPRV +DN S +KAT+I+VDSAN+ G LLE+VQ+L DL+L I +AYISS
Sbjct: 13 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 72
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++ V + IQ+SLGP A F + RSVGV + + T IELT
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA-CFSTSMRSVGVIPSTDSTVIELT 131
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+ LKC+V+ AE+WTHN+R A+V+ +T + TG I DP+ L++IK
Sbjct: 132 GCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKN 191
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA--SGRSKPLV 249
LL VLKG R A T VS H +RRLHQMM+ DRDY+ + S+ R +P V
Sbjct: 192 LLRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDV 251
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
V++ DK Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E EA+QEYY+RH+D
Sbjct: 252 CVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHID 311
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G+P+ SEAE+QRVI CLEAAIKRR SEG+ LELC DR GLLS+VTRIFREN L+VTRAE
Sbjct: 312 GSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAE 371
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAY-----SKSPPQES- 423
V T+G +A+N FYV DASG + ++TI+S+R+ IG TIL+VK++ KSP ES
Sbjct: 372 VKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESP 431
Query: 424 GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
RF G LF+S+S N GL++S S
Sbjct: 432 TRFLFGGLFKSKS---FVNFGLVRSYS 455
>gi|115453517|ref|NP_001050359.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|41469089|gb|AAS07063.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708791|gb|ABF96586.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548830|dbj|BAF12273.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|125860400|dbj|BAF46923.1| ACT-domain repeat protein 7 [Oryza sativa Japonica Group]
gi|215693262|dbj|BAG88644.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 452
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/450 (58%), Positives = 334/450 (74%), Gaps = 12/450 (2%)
Query: 6 SSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIR 65
SS+ DE++K + +MNPPRV +DNTS + AT++ VDSANK G LLE+VQVL +L LI++
Sbjct: 8 SSWDSDDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVK 67
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSE----DDVSERIQQSLGPRARSFRSLRRSVGVQA 121
+AYISSDG WFMDVF+VTDQNG K+ + D++ + I + LG + S RRSVGV+
Sbjct: 68 KAYISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEP 127
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ ++T IELTG DRPGLLSEV AVL++L+CNV+ AEVWTHN R A+V+ + TGL I
Sbjct: 128 SSDYTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAIS 187
Query: 182 DPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
D LA+IK L YV KG + T V++ TH ERRLHQ+M DRDY+ +
Sbjct: 188 DTQRLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYER--YDKDRT 245
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P+V+V + DK Y+VVN+RC DRPKLLFD VCTLTDMQYVV+H +V +E PEAYQ
Sbjct: 246 NVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQ 305
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFREN 361
EYYIRH+DG+P++SEAERQRVI CLEAAI+RR SEG+ LEL DR GLLSDVTRIFREN
Sbjct: 306 EYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFREN 365
Query: 362 GLSVTRAEVTTRGSQAVNVFYVVDASG-NPVKSETIESVRKEIGLTILRVKDDA-YSKSP 419
GL+VTRAEV+TRG +AVN FYV DA+G + V +T+E++R+EIG T+L+VK + KSP
Sbjct: 366 GLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSP 425
Query: 420 PQES-GRFSLGNLFRSRSEKFLYNLGLIKS 448
PQES RF +LFR RS LY+LGLI+S
Sbjct: 426 PQESPSRFLFSSLFRPRS---LYSLGLIRS 452
>gi|147858719|emb|CAN83103.1| hypothetical protein VITISV_015490 [Vitis vinifera]
Length = 416
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/430 (61%), Positives = 324/430 (75%), Gaps = 22/430 (5%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL+ RMNPPRV +DN + + A++I+VDSANK G LLE+VQVL DL+LII +AYISS
Sbjct: 3 DEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++++ + IQ+SLG A S+RRSVGV + +HT+IELT
Sbjct: 63 DGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELT 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+ LKC+V+ AEVWTHN+R A+V+++T E TG I DP+ L+K+K+
Sbjct: 123 GSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQ 182
Query: 192 LL----LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
LL L+ L G TH ERRLHQMM+ADRDY+ Y + + R P
Sbjct: 183 LLCNLRLWSLHG--------------VTHTERRLHQMMFADRDYERIYNDGSDEAQR--P 226
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
V V + DK Y+VV +R DRPKLLFD VCTLTDMQYVV+HA V AE PEAYQEYYIRH
Sbjct: 227 NVNVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRH 286
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
+DG+P+ S+AERQRVI CLEAAI+RR SEG+ LELC DR GLLSDVTRIFREN LSVTR
Sbjct: 287 IDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTR 346
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYS-KSPPQES-GR 425
AEVTTR +AVN F+V DASG PV ++TI+S+R+ IG TIL+VK K PQES R
Sbjct: 347 AEVTTRAGKAVNTFHVRDASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTR 406
Query: 426 FSLGNLFRSR 435
F L LFRSR
Sbjct: 407 FLLVGLFRSR 416
>gi|125544303|gb|EAY90442.1| hypothetical protein OsI_12028 [Oryza sativa Indica Group]
Length = 455
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/450 (58%), Positives = 334/450 (74%), Gaps = 12/450 (2%)
Query: 6 SSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIR 65
SS+ DE++K + +MNPPRV +DNTS + AT++ VDSANK G LLE+VQVL +L LI++
Sbjct: 11 SSWDSDDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVK 70
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSE----DDVSERIQQSLGPRARSFRSLRRSVGVQA 121
+AYISSDG WFMDVF+VTDQNG K+ + D++ + I + LG + S RRSVGV+
Sbjct: 71 KAYISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEP 130
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ ++T IELTG DRPGLLSEV AVL++L+CNV+ AEVWTHN R A+V+ + TGL I
Sbjct: 131 SSDYTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRETGLAIS 190
Query: 182 DPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
D LA+IK L YV KG + T V++ TH ERRLHQ+M DRDY+ +
Sbjct: 191 DTQRLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYER--YDKDRT 248
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P+V+V + DK Y+VVN+RC DRPKLLFD VCTLTDMQYVV+H +V +E PEAYQ
Sbjct: 249 NVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQ 308
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFREN 361
EYYIRH+DG+P++SEAERQRVI CLEAAI+RR SEG+ LEL DR GLLSDVTRIFREN
Sbjct: 309 EYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFREN 368
Query: 362 GLSVTRAEVTTRGSQAVNVFYVVDASG-NPVKSETIESVRKEIGLTILRVKDDA-YSKSP 419
GL+VTRAEV+TRG +AVN FYV DA+G + V +T+E++R+EIG T+L+VK + KSP
Sbjct: 369 GLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSP 428
Query: 420 PQES-GRFSLGNLFRSRSEKFLYNLGLIKS 448
PQES RF +LFR RS LY+LGLI+S
Sbjct: 429 PQESPSRFLFSSLFRPRS---LYSLGLIRS 455
>gi|125586650|gb|EAZ27314.1| hypothetical protein OsJ_11253 [Oryza sativa Japonica Group]
Length = 455
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/450 (58%), Positives = 334/450 (74%), Gaps = 12/450 (2%)
Query: 6 SSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIR 65
SS+ DE++K + +MNPPRV +DNTS + AT++ VDSANK G LLE+VQVL +L LI++
Sbjct: 11 SSWDSDDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVK 70
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSE----DDVSERIQQSLGPRARSFRSLRRSVGVQA 121
+AYISSDG WFMDVF+VTDQNG K+ + D++ + I + LG + S RRSVGV+
Sbjct: 71 KAYISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEP 130
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ ++T IELTG DRPGLLSEV AVL++L+CNV+ AEVWTHN R A+V+ + TGL I
Sbjct: 131 SSDYTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAIS 190
Query: 182 DPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
D LA+IK L YV KG + T V++ TH ERRLHQ+M DRDY+ +
Sbjct: 191 DTQRLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYER--YDKDRT 248
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P+V+V + DK Y+VVN+RC DRPKLLFD VCTLTDMQYVV+H +V +E PEAYQ
Sbjct: 249 NVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQ 308
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFREN 361
EYYIRH+DG+P++SEAERQRVI CLEAAI+RR SEG+ LEL DR GLLSDVTRIFREN
Sbjct: 309 EYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFREN 368
Query: 362 GLSVTRAEVTTRGSQAVNVFYVVDASG-NPVKSETIESVRKEIGLTILRVKDDA-YSKSP 419
GL+VTRAEV+TRG +AVN FYV DA+G + V +T+E++R+EIG T+L+VK + KSP
Sbjct: 369 GLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSP 428
Query: 420 PQES-GRFSLGNLFRSRSEKFLYNLGLIKS 448
PQES RF +LFR RS LY+LGLI+S
Sbjct: 429 PQESPSRFLFSSLFRPRS---LYSLGLIRS 455
>gi|195970393|gb|ACG60681.1| unknown protein [Brassica oleracea var. alboglabra]
Length = 446
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/448 (56%), Positives = 330/448 (73%), Gaps = 13/448 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL+ RMNPPRV +DN S + AT+I+VDSAN+ G LLE+VQ+L DL+L I +AYISS
Sbjct: 3 DEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++ V + IQ+SLGP A F + R++GV + + T IELT
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA-CFSTPMRTIGVTPSTDSTVIELT 121
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+ L+C+V+ AEVWTHN+R A+V+ +T ++TG I DP+ L++IK
Sbjct: 122 GCDRPGLLSELTAVLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRIKN 181
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYA---ESGSASGRSKPL 248
LL VLKG R A T +S H +RRLHQMM+ DRDY+ +S R +P
Sbjct: 182 LLRNVLKGSNTPREAKTVLSHGEVHTDRRLHQMMFEDRDYEHRAVVDDDSSIQDERQRPD 241
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V V++ DK Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E EAYQEYY+RH+
Sbjct: 242 VCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVRHI 301
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG+P+ SEAE+QRVI CLEAAI RR SEG+ LELC DR GLLS+VTRIFREN L+VTRA
Sbjct: 302 DGSPVKSEAEKQRVIQCLEAAINRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRA 361
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-----YSKSPPQES 423
EV T+G +A+N FYV DASG + ++TI+S+R+ IG TIL+VK++ K P Q+S
Sbjct: 362 EVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPEEQQQRQKPPSQDS 421
Query: 424 -GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
RF G LF+S+S N GL++S S
Sbjct: 422 PTRFLFGGLFKSKS---FVNFGLVRSYS 446
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 9 AVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAY 68
AVVD+ + P V VDN ++ +++ V ++ L + V L D+ ++
Sbjct: 225 AVVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGS 284
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTI 128
+ ++G ++V +G+ + + +R+ Q L ++ R V E +
Sbjct: 285 VDTEGTEAYQEYYVRHIDGSPVKSEAEKQRVIQCLEA------AINRRVS-----EGLKL 333
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
EL DR GLLS V + + V AEV T + + Y+ S+A+G ID
Sbjct: 334 ELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYV-SDASGYSID 385
>gi|356499936|ref|XP_003518791.1| PREDICTED: uncharacterized protein LOC100813551 isoform 2 [Glycine
max]
Length = 433
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/449 (58%), Positives = 324/449 (72%), Gaps = 34/449 (7%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL RMNPPRV +DN + + AT+I+VDSANK G LLE+VQ+L DL+LII +AYISS
Sbjct: 9 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 68
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQA---ALEHTTI 128
DG WFMDVF+VT Q+GNK++++ + + I R VGV ++HT I
Sbjct: 69 DGGWFMDVFNVTGQDGNKVTDEAILDYI---------------RKVGVSPFGQTMDHTAI 113
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL G DRPGLLSEV AVL++LKCN++ AEVWTHN+R A+V+++T E TG I DP L+
Sbjct: 114 ELMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSI 173
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDY-----DMNYAESGSASG 243
IK LL VL G KR A T V+ ++TH ERRLHQMM+ADRDY D ++AE
Sbjct: 174 IKELLCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYERVNDDDDFAE------ 227
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ +P V V + +DK Y+VV ++C DRPKLLFD VCTLTDMQYVV+HA + AE PEAYQEY
Sbjct: 228 KQRPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEY 287
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YI+H+DG+P+ S+AERQRVI CL AAI+RR SEG+ LELC DR GLLSDVTRIFREN L
Sbjct: 288 YIKHIDGSPVKSDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSL 347
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYS-KSPPQE 422
+VTRAEV T+G +AVN FYV ASG PV S+TIES+R+ IG TIL+VK KS PQ+
Sbjct: 348 TVTRAEVATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQD 407
Query: 423 SGRFSL-GNLFRSRSEKFLYNLGLIKSCS 450
S SL LF+SRS N GL+KS S
Sbjct: 408 SPTRSLFSGLFKSRS---FVNFGLVKSYS 433
>gi|449452827|ref|XP_004144160.1| PREDICTED: uncharacterized protein LOC101218703 [Cucumis sativus]
gi|449524655|ref|XP_004169337.1| PREDICTED: uncharacterized protein LOC101228960 [Cucumis sativus]
Length = 444
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/442 (58%), Positives = 327/442 (73%), Gaps = 11/442 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN + + AT+I+VDSANK G LLE+VQVL DL+LI+ +AYIS
Sbjct: 9 DEYVKLIRRMNPPRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYISC 68
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++ V + I++SL + F S RSVGV+ ++++T IEL
Sbjct: 69 DGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDS-CFASSMRSVGVKPSVDYTVIELI 127
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DR GLLSEV AVL+ LKCNV+ AEVWTHN+R A+V+++T + TG I D + L++IK
Sbjct: 128 GNDRQGLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRIKG 187
Query: 192 LLLYVLKGDRDK-RSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVT 250
LL VL+G + + A T VS TH ERRLHQMM+ADRDY++ + + KP V
Sbjct: 188 LLSNVLRGSNSRSKGAKTVVSHGVTHIERRLHQMMFADRDYEL--LDEDVMEDQQKPNVK 245
Query: 251 VESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDG 310
V + D Y+VV +R DRPKLLFD VCTLTDMQYVV+HA V+AE EAYQEYYIRH+DG
Sbjct: 246 VVNWCDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIRHIDG 305
Query: 311 NPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
+P+ S+AERQRVI+CLEAAI+RR SEG+ LELC DR GLLSDVTRIFREN L+VTRAEV
Sbjct: 306 SPVKSDAERQRVIHCLEAAIRRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEV 365
Query: 371 TTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQES----GRF 426
TT+ +A+N FYV D SG PV S+TI+S+R+ IG TIL+VK + K Q S RF
Sbjct: 366 TTKAGKAINTFYVRDPSGYPVDSKTIDSIRELIGQTILKVKGSSSPKEQKQASQDSPTRF 425
Query: 427 SLGNLFRSRSEKFLYNLGLIKS 448
G LFRSRS N GLI+S
Sbjct: 426 LFGGLFRSRS---FVNFGLIRS 444
>gi|302784474|ref|XP_002974009.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
gi|302803458|ref|XP_002983482.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300148725|gb|EFJ15383.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300158341|gb|EFJ24964.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
Length = 477
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/459 (55%), Positives = 328/459 (71%), Gaps = 23/459 (5%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L R+NPPRV +DN + AT+IK+DS+N+ G LL++VQVL DLDL I +A+ISSD
Sbjct: 17 EYETLAARINPPRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILKAFISSD 76
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTG 132
G WFMDVFHVTD++GNKLS++ V I+ +A S R++GVQ+ EHT IELTG
Sbjct: 77 GGWFMDVFHVTDRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHTAIELTG 136
Query: 133 RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT-SEATGLPIDDPDTLAKIKR 191
DRPGLLSE+ AVL+ L CNV+ AEVWTHN+R+A +VY+T E G P+ DP L IK+
Sbjct: 137 NDRPGLLSEISAVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTKLCHIKQ 196
Query: 192 LLLYVLKGDR-DKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAE------------S 238
+L V+KGD D ++A T ++ TH ERRLHQMM AD++ +M AE S
Sbjct: 197 MLGQVMKGDSLDGKTARTDFAMGLTHTERRLHQMMSADKEEEMEVAEEEAALSPAPTSIS 256
Query: 239 GSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
S + +P VTV++C +KGY+VV ++C DRPKLLFD VCTLTDM+YVV+HAT+ +E P
Sbjct: 257 DSVDYKGRPTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATIDSEGPN 316
Query: 299 AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIF 358
A+QEYYIRH+DG +++E ERQRV+ CLEAAI RR S+G+ LEL +DR GLLSDVTRIF
Sbjct: 317 AFQEYYIRHLDGYTLNTETERQRVVRCLEAAILRRASQGVRLELSTQDRIGLLSDVTRIF 376
Query: 359 RENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYS-- 416
RENGLSV RAEVTTR AVNVFYV DA+G V +E++R+E+GL IL+V + +
Sbjct: 377 RENGLSVARAEVTTRDDMAVNVFYVTDANGGSVDMRVVEAIREEVGLAILKVTQERFPPK 436
Query: 417 --KSPPQES-----GRFSLGNLFRSRSEKFLYNLGLIKS 448
S P ES RFSLG+ FRS SE+ LY LGL+KS
Sbjct: 437 MLHSSPTESADKSAARFSLGSFFRSHSERLLYTLGLLKS 475
>gi|226506214|ref|NP_001148163.1| LOC100281771 [Zea mays]
gi|195616314|gb|ACG29987.1| ACR5 [Zea mays]
gi|414869678|tpg|DAA48235.1| TPA: ACR5 [Zea mays]
Length = 471
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 281/471 (59%), Positives = 338/471 (71%), Gaps = 21/471 (4%)
Query: 1 MDCWSSSFA--VVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLN 58
M C S S +VDE+EKLVLRMNPPRVTVDN S+ ATL+KVDSANK G+LLE+VQVL
Sbjct: 1 MACGSRSRTNEMVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLT 60
Query: 59 DLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS---LRR 115
DL L I+RAYISSDGEWFMDVFHV DQ+GNKL + V +RI+QSLG + SFR
Sbjct: 61 DLKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAV 120
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+V +A TTIEL GRDRPGLLSEVFAVL+DL+CNV+ +EVWTH+ R+A++V++T
Sbjct: 121 AVEAEAEEAQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDAD 180
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGD-RDKRSANTAVSVDST-HKERRLHQMMYADRDYDM 233
T I+DP L +RLL +VL+G RDK++A AVS H RRLHQMM ADR
Sbjct: 181 TLGAIEDPARLDTARRLLRHVLRGSSRDKKAARAAVSARVVEHAPRRLHQMMRADRSARR 240
Query: 234 NYAESGSASGR------SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVV 287
+ G G P+V VE C ++GYT+VN+RC DR KLLFD VCTLTDMQYVV
Sbjct: 241 DGEGEGEGDGERERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVV 300
Query: 288 YHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDR 347
+H TVIAE EAYQEYYIRH+D SS ER+R+ LEAAI+RR +EG+ LELCCEDR
Sbjct: 301 FHGTVIAEGSEAYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDR 360
Query: 348 AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA-SGNPVKSETIESVRKEIGLT 406
GLLSDVTR+FRE+GLSVT AEV TRG++A NVFYVVDA SG PV+++ + +VR EIG
Sbjct: 361 VGLLSDVTRVFREHGLSVTHAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQ 420
Query: 407 ILRVKDD-------AYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+L V++ A GR SLGN+ RSRSEKFLYNLGLI+SCS
Sbjct: 421 LLFVREHQDAAAAAANGTRSTVAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 471
>gi|302818108|ref|XP_002990728.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
gi|300141466|gb|EFJ08177.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
Length = 466
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/459 (54%), Positives = 325/459 (70%), Gaps = 25/459 (5%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+++ L+ R+N P V +DN+S ATL+KVDSANK G LLE+VQVL DLDL I +AYISSD
Sbjct: 12 DYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLG----PRARSFRSLRRSVGVQAALEHTTI 128
G WFMDVFHVTD+ G+KL + + + IQQSLG ++ SL +VG Q++ HT I
Sbjct: 72 GGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL+GRDRPGLLSE+ VL+ + CNV+ AEVWTHN R+A VVY+T EATG PI DP+ LA+
Sbjct: 132 ELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLAR 191
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSAS---GRS 245
+K L VL+GD + R A T S TH ERRLHQMM ADRDYD+ + S + R
Sbjct: 192 MKEQLSQVLRGDDENRLATTDFSSGLTHTERRLHQMMLADRDYDVPSSTSSINAVLDARI 251
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P++++ +C +KGY+VV+++C DRPKLLFD VCTLTDM+YVV+HA+ A+ P AYQEYYI
Sbjct: 252 RPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYYI 311
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RH+DG + +AE++RV+ CLEAAI+RR SEG+ LELC DR GLLSDVTR+FRE GLSV
Sbjct: 312 RHMDGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREKGLSV 371
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA----------- 414
TRA+V+TRG +AVNVFYV D SG V + +E++R EIG IL VK++
Sbjct: 372 TRADVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVKEEVKEGRGEGAAEV 431
Query: 415 ---YSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+ + RFS GNL SE+F + LGL+KS S
Sbjct: 432 AAEVAAAGGMSRSRFSFGNL----SERFFHGLGLVKSYS 466
>gi|302810022|ref|XP_002986703.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
gi|300145591|gb|EFJ12266.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
Length = 466
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/459 (54%), Positives = 325/459 (70%), Gaps = 25/459 (5%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+++ L+ R+N P V +DN+S ATL+KVDSANK G LLE+VQVL DLDL I +AYISSD
Sbjct: 12 DYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLG----PRARSFRSLRRSVGVQAALEHTTI 128
G WFMDVFHVTD+ G+KL + + + IQQSLG ++ SL +VG Q++ HT I
Sbjct: 72 GGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL+GRDRPGLLSE+ VL+ + CNV+ AEVWTHN R+A VVY+T EATG PI DP+ LA+
Sbjct: 132 ELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLAR 191
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSAS---GRS 245
+K L VL+GD + R A T S TH ERRLHQMM ADRDYD+ + S + R
Sbjct: 192 MKERLSQVLRGDDENRLATTDFSSGLTHTERRLHQMMLADRDYDVPSSTSSINAVLDARI 251
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P++++ +C +KGY+VV+++C DRPKLLFD VCTLTDM+YVV+HA+ A+ P AYQEYYI
Sbjct: 252 RPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYYI 311
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RH+DG + +AE++RV+ CLEAAI+RR SEG+ LELC DR GLLSDVTR+FRE GLSV
Sbjct: 312 RHMDGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREKGLSV 371
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA----------- 414
TRA+V+TRG +AVNVFYV D SG V + +E++R EIG IL VK++
Sbjct: 372 TRADVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVKEEVKEGRGEGAAEV 431
Query: 415 ---YSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+ + RFS GNL SE+F + LGL+KS S
Sbjct: 432 AAEVAAAGGMSRSRFSFGNL----SERFFHGLGLVKSYS 466
>gi|219886627|gb|ACL53688.1| unknown [Zea mays]
Length = 471
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 280/471 (59%), Positives = 338/471 (71%), Gaps = 21/471 (4%)
Query: 1 MDCWSSSFA--VVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLN 58
M C S S +VDE+EKLVLRMNPPRVTVDN S+ ATL+KVDSANK G+LLE+VQVL
Sbjct: 1 MACGSRSRTNEMVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLT 60
Query: 59 DLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS---LRR 115
DL L I+RAYISSDGEWFMDVFHV DQ+GNKL + V +RI+QSLG + SFR
Sbjct: 61 DLKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAV 120
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+V +A TTIEL GRDRPGLLSEVFAVL+DL+CNV+ +EVWTH+ R+A++V++T
Sbjct: 121 AVEAEAEEAQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDAD 180
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGD-RDKRSANTAVSVDST-HKERRLHQMMYADRDYDM 233
T I+DP L +RLL +VL+G RDK++A AVS + RRLHQMM ADR
Sbjct: 181 TLGAIEDPARLDTARRLLRHVLRGSSRDKKAARAAVSARVVEYAPRRLHQMMRADRSARR 240
Query: 234 NYAESGSASGR------SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVV 287
+ G G P+V VE C ++GYT+VN+RC DR KLLFD VCTLTDMQYVV
Sbjct: 241 DGEGEGEGDGERERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVV 300
Query: 288 YHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDR 347
+H TVIAE EAYQEYYIRH+D SS ER+R+ LEAAI+RR +EG+ LELCCEDR
Sbjct: 301 FHGTVIAEGSEAYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDR 360
Query: 348 AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA-SGNPVKSETIESVRKEIGLT 406
GLLSDVTR+FRE+GLSVT AEV TRG++A NVFYVVDA SG PV+++ + +VR EIG
Sbjct: 361 VGLLSDVTRVFREHGLSVTHAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQ 420
Query: 407 ILRVKDD-------AYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+L V++ A GR SLGN+ RSRSEKFLYNLGLI+SCS
Sbjct: 421 LLFVREHQDAAAAAANGTRSTVAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 471
>gi|225451503|ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
gi|296082319|emb|CBI21324.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/442 (56%), Positives = 324/442 (73%), Gaps = 7/442 (1%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN ++ +AT+I+VDS NK G LLE+VQVL D++L+I +AYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDASEEATVIQVDSVNKHGILLEVVQVLTDMNLVITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+V D +GNK+ + V I ++L A +R +VGV + +HT+IEL+
Sbjct: 63 DGGWFMDVFNVVDGDGNKIRDKGVINYITKTLERDASFVPPMRGTVGVMPSEDHTSIELS 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+DL CNV+ AE+WTHN+R A+VV++T ++TG I+DP+ L+KIK
Sbjct: 123 GTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRLSKIKE 182
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYD-MNYAESGSASGRSKPLV 249
LL VLKG+ D ++A +S TH+ERRLHQ+M+ADRDY + AE G S+P V
Sbjct: 183 LLCNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADRDYQRVERAELGKDKS-SRPHV 241
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
TV C +K YTV+ +R DRPKLLFD VCTLTDMQYVV+H V EAYQEYYIRHVD
Sbjct: 242 TVLDCIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGVVHTGRMEAYQEYYIRHVD 301
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G P+SS+AER+RVI CLEAAI+RR SEG+ LEL EDR GLLSD+TR+FREN L + RAE
Sbjct: 302 GLPMSSDAERERVIECLEAAIERRASEGLELELRTEDRFGLLSDITRVFRENSLCIKRAE 361
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESG-RFSL 428
++T G +A + FYV D +GNPV + I+S+R++IG +IL+VK+ S PQE+ F
Sbjct: 362 ISTEGGKAKDTFYVTDVTGNPVNPQIIDSIRQQIGHSILQVKNSNLSPKAPQETTMSFLF 421
Query: 429 GNLFRSRSEKFLYNLGLIKSCS 450
GN+F+ R+ L N LI+S S
Sbjct: 422 GNIFKCRT---LQNFKLIRSYS 440
>gi|297818020|ref|XP_002876893.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
gi|297322731|gb|EFH53152.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/456 (56%), Positives = 333/456 (73%), Gaps = 13/456 (2%)
Query: 3 CWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
C S S+ + DE K + R+NPPRV +DN + T+IKVDSANK G LLE+VQVL +L+L
Sbjct: 4 CLSYSYNMDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNL 63
Query: 63 IIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGP-RARSFR-SLRRSVGVQ 120
I++AYISSDG WFMDVF+VTDQ+GNK++++ V + I++SLGP + F S+R ++GV+
Sbjct: 64 TIKKAYISSDGGWFMDVFNVTDQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVK 123
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
++++T IELTG DRPGLLSE+ AVL DL+CNV+ AE+WTH ++ A+V+ +T E T I
Sbjct: 124 QSVDYTVIELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAI 183
Query: 181 DDPDTLAKIKRLLLYVLKGD---RDKRSANTAVS--VDSTHKERRLHQMMYADRDYDM-- 233
DP+ L+KI++LL YVL G R R T VS +D TH +R+LHQ+M+ADRDYD
Sbjct: 184 TDPERLSKIRKLLGYVLTGGSSGRRFREPKTMVSSALDDTHTDRKLHQLMFADRDYDEWE 243
Query: 234 NYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI 293
N + GR P V V + D Y++V ++C DRPKLLFD V TLTDM YVV HA++
Sbjct: 244 NNVDDEDKCGRVVPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASID 303
Query: 294 AESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSD 353
AE PEAYQEYYIRH DG+P+ SEAERQRVI CL+AAI+RR SEG+ LELC DR GLLSD
Sbjct: 304 AEGPEAYQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSD 363
Query: 354 VTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK-D 412
VTRIFREN L+VTRAEV T+G +A+N FYV DASG V ++TIES+R+ IG TIL+VK
Sbjct: 364 VTRIFRENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDAKTIESIRQVIGQTILQVKGG 423
Query: 413 DAYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKS 448
+ +K+ PQ+S L +F+SRS N GLI+S
Sbjct: 424 NTDAKTSPQDSPTGFLFGVFKSRS---FVNFGLIRS 456
>gi|357503685|ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497146|gb|AES78349.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 442
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/445 (55%), Positives = 326/445 (73%), Gaps = 11/445 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN + AT+I+VDS NK G LL++VQV++D++L+I++AYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTD+NGNK+ + +V + IQ+ L S+R SVGV EHT IELT
Sbjct: 63 DGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRLEKNPSFETSMRESVGVVPTEEHTVIELT 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+DL+CNV+ AE+WTHN+R A+VV++T +++G I+DP L+ I+
Sbjct: 123 GTDRPGLLSEICAVLADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRD 182
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSASGRSK---P 247
LL VL+G D ++A TA+S T+++RRLHQ+M+ADRDY+ E R K P
Sbjct: 183 LLCNVLRGSDDPKTAKTALSHPGVTYRDRRLHQIMFADRDYER--VERAGLRERDKGPFP 240
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
VTV CT++ YTVV +R DRPKLLFD VCTLTDMQYVV+H V E AYQE+YIRH
Sbjct: 241 HVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRH 300
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
VDG PISSEAER+R+I CLEAAI+RR SEG+ LELC EDR GLLSD+TRIFREN L + R
Sbjct: 301 VDGFPISSEAERERLIQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKR 360
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK-DDAYSKSPPQESG-R 425
AE++T +A + FYV D +GNPV ++I+S+R++IG T+L+VK + + S PPQ +
Sbjct: 361 AEISTENGKAKDTFYVTDVTGNPVDPKSIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIG 420
Query: 426 FSLGNLFRSRSEKFLYNLGLIKSCS 450
F G+ F++RS N LI+S S
Sbjct: 421 FLFGSFFKARS---FQNFKLIRSYS 442
>gi|18395601|ref|NP_565304.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|79316674|ref|NP_001030965.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|20197900|gb|AAD20075.2| putative uridylyl transferase [Arabidopsis thaliana]
gi|24030269|gb|AAN41308.1| putative uridylyl transferase [Arabidopsis thaliana]
gi|222424419|dbj|BAH20165.1| AT2G03730 [Arabidopsis thaliana]
gi|330250648|gb|AEC05742.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|330250649|gb|AEC05743.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
Length = 456
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/456 (55%), Positives = 329/456 (72%), Gaps = 13/456 (2%)
Query: 3 CWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
C S S+ + DE K + R+NPPRV +DN + T+IKVDSANK G LLE+VQVL +L+L
Sbjct: 4 CLSYSYNMDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNL 63
Query: 63 IIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF--RSLRRSVGVQ 120
I++AYISSDG WFMDVF+VTDQ+GNK++++ V E I++SLGP S S+R ++GV+
Sbjct: 64 TIKKAYISSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVK 123
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
++++T +ELTG DRPGLLSE+ AVL DL+CNV+ AE+WTH ++ A+V+ +T E T I
Sbjct: 124 QSVDYTVVELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAI 183
Query: 181 DDPDTLAKIKRLLLYVLKGD---RDKRSANTAVS--VDSTHKERRLHQMMYADRDYDM-- 233
DP+ L+KI++LL YVL G R R T VS ++ TH +R+LHQ+M+ADRDYD
Sbjct: 184 TDPERLSKIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWE 243
Query: 234 NYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI 293
N + GR P V V + D Y++V ++C DRPKLLFD V TLTDM YVV HA++
Sbjct: 244 NNVDDEDKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASID 303
Query: 294 AESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSD 353
AE P+AYQEYYIRH DG+P+ SEAERQRVI CL+AAI+RR SEG+ LELC DR GLLSD
Sbjct: 304 AEGPQAYQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSD 363
Query: 354 VTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDD 413
VTRIFREN L+VTRAEV T+G +A+N FYV DASG V ++TIES+R+ IG TIL+VK
Sbjct: 364 VTRIFRENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGG 423
Query: 414 AYSKSP-PQESGRFSLGNLFRSRSEKFLYNLGLIKS 448
P PQ+S L +F+SRS N GLI+S
Sbjct: 424 NTDAKPSPQDSPTGFLFGVFKSRS---FVNFGLIRS 456
>gi|242040599|ref|XP_002467694.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
gi|241921548|gb|EER94692.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
Length = 427
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/434 (58%), Positives = 323/434 (74%), Gaps = 13/434 (2%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVF 80
MNPPRVT+DNTS AT+I VDSANK G LLE+VQVL DL LI+++AYISSDG WFMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGVLLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 81 HVTDQNGNKLSEDDVSERIQ----QSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRP 136
+VT+Q G+K+ ++ V E I+ +S+GP + S RR++GV+ + ++T IELTG DRP
Sbjct: 61 NVTNQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDYTLIELTGTDRP 120
Query: 137 GLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYV 196
GLLSEV AVL++L+CNV+ AE+WTHN R A+V+ +T +GL I D + L +IK L V
Sbjct: 121 GLLSEVSAVLTNLECNVVNAELWTHNERAAAVMQVTDRKSGLAISDAERLGRIKERLCNV 180
Query: 197 LKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTD 256
KG R A T V++ TH ERRLHQMM DRDYD + + ASG +V+V +
Sbjct: 181 FKGR--SRDAKTTVAMGITHTERRLHQMMLEDRDYDRH--DKDRASGSPTSMVSVVNWLQ 236
Query: 257 KGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSE 316
K Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E P+AYQ+YYIRH+DG+P++SE
Sbjct: 237 KDYSVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAYQDYYIRHIDGSPVNSE 296
Query: 317 AERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQ 376
AER+R+I+CLEAAI+RR SEG+ LEL DR GLLSDVTRIFRENGL+VTRAEV+T+G +
Sbjct: 297 AERKRIIHCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTKGDK 356
Query: 377 AVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQES-GRFSLGNLFRS 434
A+N FYV DA+G+ V+ +T+E++R+EIG T+L+VK KS QES RF +LFR
Sbjct: 357 AINTFYVRDAAGSSVELKTLEAIRQEIGQTVLQVKGHPDQPKSLTQESPTRFLFSSLFRP 416
Query: 435 RSEKFLYNLGLIKS 448
RS L NLGLI S
Sbjct: 417 RS---LCNLGLIGS 427
>gi|297742666|emb|CBI34815.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/457 (56%), Positives = 322/457 (70%), Gaps = 33/457 (7%)
Query: 8 FAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA 67
+ +DE+EKLV+RMN PRV VDN TL+KVDSA K G LLE VQVL DL+L I++A
Sbjct: 3 WPCLDEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKA 62
Query: 68 YISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLG----PRARSFRSLRRSVGVQAAL 123
YISSDG WFMDVFHVTD NGNKL+++ V I+QSLG R+ SF L
Sbjct: 63 YISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGL---------- 112
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
T +ELTG DR GLLSEVFAVL+DL+CNV+ +++WTHN R+AS++Y+ +G PI+D
Sbjct: 113 --TALELTGTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDS 170
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+ +I+ L VLKGD D RSA T+VS+ TH ERRLHQMM+ADRDY+ E S
Sbjct: 171 QKIDRIEGRLRNVLKGDNDIRSAKTSVSLAVTHTERRLHQMMFADRDYER---EPIIRSA 227
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
P VTV++ ++GY+VVN++C DR KLLFD VCTLTDMQYVV+HAT+ +AY E+
Sbjct: 228 SESPAVTVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEF 287
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YIRH DG+PISSEAERQRVI CL+AAI+RR SEG+ LELC EDR GLL+DVTR FRENGL
Sbjct: 288 YIRHTDGSPISSEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGL 347
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD-------DAYS 416
+VTRAE++T A+NVFYV DA GNP + IE+VR++IGL+ L+VK+ +A
Sbjct: 348 NVTRAEISTTSEIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAER 407
Query: 417 KSPPQESG---RFSLGNLFRSRSEKFLYNLGLIKSCS 450
P G SLG+L R + LYNLGLI+S S
Sbjct: 408 DEPTVGVGGAVLLSLGSLVR----RNLYNLGLIRSHS 440
>gi|225456388|ref|XP_002280377.1| PREDICTED: uncharacterized protein LOC100256112 [Vitis vinifera]
gi|297734456|emb|CBI15703.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/445 (56%), Positives = 321/445 (72%), Gaps = 13/445 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN S AT+I+VDSAN+ G LL++VQVL DL+LII +AYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTD +GNKL ++++ +Q++L A SLR SVGV + E T+IELT
Sbjct: 63 DGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIELT 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+DL+CNV+ AE+WTHN+R A+V+++T +ATG I+DP L+ IK+
Sbjct: 123 GSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMIKK 182
Query: 192 LLLYVLKGDRDKRSANTAVSVD---STHKERRLHQMMYADRDYD-MNYAESGSASGRSKP 247
L V KG+ R+ +S + +++RRLHQMM+A RD++ + Y + + S+P
Sbjct: 183 RLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYVQDKN----SRP 238
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
VTV C+D+ YTVV +R DRPKLLFD VC LTDMQYVV+H TVI EAYQE+YIRH
Sbjct: 239 HVTVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRH 298
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
VDG P+ SEAERQRV CLEAAI+RR EG+ LEL EDR GLLSDVTR+FRENGL + R
Sbjct: 299 VDGLPLRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCIKR 358
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQESGR- 425
A +TT+ +A + F+V D SGN V S+T+E +R++IG TILRVK + +S PQE R
Sbjct: 359 AVITTKCGKAKDTFFVTDVSGNTVDSKTVEMIRQQIGQTILRVKGNLNFSPKLPQEGTRS 418
Query: 426 FSLGNLFRSRSEKFLYNLGLIKSCS 450
F GNLF+ RS LIKS S
Sbjct: 419 FPFGNLFKGRS---FQTFKLIKSYS 440
>gi|225426651|ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
gi|147794108|emb|CAN62364.1| hypothetical protein VITISV_031924 [Vitis vinifera]
Length = 444
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/457 (56%), Positives = 322/457 (70%), Gaps = 33/457 (7%)
Query: 8 FAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA 67
+ +DE+EKLV+RMN PRV VDN TL+KVDSA K G LLE VQVL DL+L I++A
Sbjct: 7 WPCLDEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKA 66
Query: 68 YISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLG----PRARSFRSLRRSVGVQAAL 123
YISSDG WFMDVFHVTD NGNKL+++ V I+QSLG R+ SF L
Sbjct: 67 YISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGL---------- 116
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
T +ELTG DR GLLSEVFAVL+DL+CNV+ +++WTHN R+AS++Y+ +G PI+D
Sbjct: 117 --TALELTGTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDS 174
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+ +I+ L VLKGD D RSA T+VS+ TH ERRLHQMM+ADRDY+ E S
Sbjct: 175 QKIDRIEGRLRNVLKGDNDIRSAKTSVSLAVTHTERRLHQMMFADRDYE---REPIIRSA 231
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
P VTV++ ++GY+VVN++C DR KLLFD VCTLTDMQYVV+HAT+ +AY E+
Sbjct: 232 SESPAVTVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEF 291
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YIRH DG+PISSEAERQRVI CL+AAI+RR SEG+ LELC EDR GLL+DVTR FRENGL
Sbjct: 292 YIRHTDGSPISSEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGL 351
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD-------DAYS 416
+VTRAE++T A+NVFYV DA GNP + IE+VR++IGL+ L+VK+ +A
Sbjct: 352 NVTRAEISTTSEIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAER 411
Query: 417 KSPPQESG---RFSLGNLFRSRSEKFLYNLGLIKSCS 450
P G SLG+L R + LYNLGLI+S S
Sbjct: 412 DEPTVGVGGAVLLSLGSLVR----RNLYNLGLIRSHS 444
>gi|22138100|gb|AAM93430.1| ACR5 [Arabidopsis thaliana]
Length = 446
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/447 (56%), Positives = 324/447 (72%), Gaps = 13/447 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE K + R+NPPRV +DN + T+IKVDSANK G LLE+VQVL +L+L I++AYISS
Sbjct: 3 DEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF--RSLRRSVGVQAALEHTTIE 129
DG WFMDVF+VTDQ+GNK++++ V E I++SLGP S S+R ++GV+ ++++T +E
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTVVE 122
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189
LTG DRPGLLSE+ AVL DL+CNV+ AE+WTH ++ A+V+ +T E T I DP+ L+KI
Sbjct: 123 LTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLSKI 182
Query: 190 KRLLLYVLKGD---RDKRSANTAVS--VDSTHKERRLHQMMYADRDYDM--NYAESGSAS 242
++LL YVL G R R T VS ++ TH +R+LHQ+M+ADRDYD N +
Sbjct: 183 RKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDDEDKC 242
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
GR P V V + D Y++V ++C DRPKLLFD V TLTDM YVV HA++ AE P+AYQE
Sbjct: 243 GRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQAYQE 302
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENG 362
YYIRH DG+P+ SEAERQRVI CL+AAI+RR SEG+ LELC DR GLLSDVTRIFREN
Sbjct: 303 YYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFRENS 362
Query: 363 LSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP-PQ 421
L+VTRAEV T+G +A+N FYV DASG V ++TIES+R+ IG TIL+VK P PQ
Sbjct: 363 LTVTRAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGGNTDAKPSPQ 422
Query: 422 ESGRFSLGNLFRSRSEKFLYNLGLIKS 448
+S L +F+SRS N GLI+S
Sbjct: 423 DSPTGFLFGVFKSRS---FVNFGLIRS 446
>gi|26452308|dbj|BAC43240.1| unknown protein [Arabidopsis thaliana]
Length = 425
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/427 (57%), Positives = 315/427 (73%), Gaps = 12/427 (2%)
Query: 32 SNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLS 91
S +KAT+I+VDSAN+ G LLE+VQ+L DL+L I +AYISSDG WFMDVF+VTDQ+GNK++
Sbjct: 3 SCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVT 62
Query: 92 EDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKC 151
++ V + IQ+SLGP A F + RSVGV + + T IELTG DRPGLLSE+ AVL+ LKC
Sbjct: 63 DEVVLDYIQKSLGPEA-CFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLKC 121
Query: 152 NVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+V+ AE+WTHN+R A+V+ +T + TG I DP+ L++IK LL VLKG R A T VS
Sbjct: 122 SVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNVLKGSNTPREAKTVVS 181
Query: 212 VDSTHKERRLHQMMYADRDYDMNYAESGSA--SGRSKPLVTVESCTDKGYTVVNLRCPDR 269
H +RRLHQMM+ DRDY+ + S+ R +P V V++ DK Y+VV +RC DR
Sbjct: 182 HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCKDR 241
Query: 270 PKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA 329
PKLLFD VCTLTDMQYVV+H +V E EA+QEYY+RH+DG+P+ SEAE+QRVI CLEAA
Sbjct: 242 PKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPVKSEAEKQRVIQCLEAA 301
Query: 330 IKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
IKRR SEG+ LELC DR GLLS+VTRIFREN L+VTRAEV T+G +A+N FYV DASG
Sbjct: 302 IKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYVSDASGY 361
Query: 390 PVKSETIESVRKEIGLTILRVKDDAY-----SKSPPQES-GRFSLGNLFRSRSEKFLYNL 443
+ ++TI+S+R+ IG TIL+VK++ KSP ES RF G LF+S+S N
Sbjct: 362 SIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFLFGGLFKSKS---FVNF 418
Query: 444 GLIKSCS 450
GL++S S
Sbjct: 419 GLVRSYS 425
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V VDN ++ +++ V ++ L + V L D+ ++ + ++G ++V
Sbjct: 219 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 278
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVF 143
+G+ + + +R+ Q L +++R V E +EL DR GLLS V
Sbjct: 279 HIDGSPVKSEAEKQRVIQCLEA------AIKRRVS-----EGLKLELCTTDRVGLLSNVT 327
Query: 144 AVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ + V AEV T + + Y+ S+A+G ID
Sbjct: 328 RIFRENSLTVTRAEVKTKGGKALNTFYV-SDASGYSID 364
>gi|414867234|tpg|DAA45791.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 459
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/455 (56%), Positives = 329/455 (72%), Gaps = 24/455 (5%)
Query: 6 SSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIR 65
SS+ DE++K + MNPPRVT+DNTS AT+I VDSANK G LLE+VQVL DL LI++
Sbjct: 12 SSWDSDDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVK 71
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQ----QSLGPRARSFRSLRRSVGVQA 121
+AYISSDG WFMDVF VT+Q+G+K++++ V + I+ +S+GP + S RR+VGV+
Sbjct: 72 KAYISSDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEP 131
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ +HT IELTG DRPGLLSEV AVL+ L+CNV+ AE+WTHN R A+V+ +T +GL +
Sbjct: 132 SSDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVS 191
Query: 182 DPDTLAKIKRLLLYVLKGDRDKRSANTAV-SVDSTHKERRLHQMMYADRDY------DMN 234
D + + +IK L V +G R A TAV + +TH ERRLHQMM+ DRDY D
Sbjct: 192 DAERVGRIKGRLYNVFRGR--SRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGR 249
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
A SGS G P+V+V + K Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V
Sbjct: 250 AAASGSNPG---PVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDT 306
Query: 295 ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDV 354
E PEAYQ+YYIRH+DG P++SEAER+R+I CLEAAI+RR SEG+ LEL DR GLLSDV
Sbjct: 307 EGPEAYQDYYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDV 366
Query: 355 TRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA 414
TRIFRENGL+VTRAEV+TRG +AVN FYV DA+G+ V+ T+E++R+EIG T+L+VK
Sbjct: 367 TRIFRENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP 426
Query: 415 YSKSPP---QES-GRFSLGN-LFRSRSEKFLYNLG 444
PP Q+S RF + LFR RS L NLG
Sbjct: 427 EQPKPPVAAQDSPTRFLFSSLLFRPRS---LCNLG 458
>gi|226492720|ref|NP_001142223.1| uncharacterized protein LOC100274391 [Zea mays]
gi|194707686|gb|ACF87927.1| unknown [Zea mays]
gi|223947587|gb|ACN27877.1| unknown [Zea mays]
gi|414867235|tpg|DAA45792.1| TPA: ACR4 [Zea mays]
Length = 458
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/455 (56%), Positives = 329/455 (72%), Gaps = 24/455 (5%)
Query: 6 SSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIR 65
SS+ DE++K + MNPPRVT+DNTS AT+I VDSANK G LLE+VQVL DL LI++
Sbjct: 11 SSWDSDDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVK 70
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQ----QSLGPRARSFRSLRRSVGVQA 121
+AYISSDG WFMDVF VT+Q+G+K++++ V + I+ +S+GP + S RR+VGV+
Sbjct: 71 KAYISSDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEP 130
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ +HT IELTG DRPGLLSEV AVL+ L+CNV+ AE+WTHN R A+V+ +T +GL +
Sbjct: 131 SSDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVS 190
Query: 182 DPDTLAKIKRLLLYVLKGDRDKRSANTAV-SVDSTHKERRLHQMMYADRDY------DMN 234
D + + +IK L V +G R A TAV + +TH ERRLHQMM+ DRDY D
Sbjct: 191 DAERVGRIKGRLYNVFRGR--SRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGR 248
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
A SGS G P+V+V + K Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V
Sbjct: 249 AAASGSNPG---PVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDT 305
Query: 295 ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDV 354
E PEAYQ+YYIRH+DG P++SEAER+R+I CLEAAI+RR SEG+ LEL DR GLLSDV
Sbjct: 306 EGPEAYQDYYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDV 365
Query: 355 TRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA 414
TRIFRENGL+VTRAEV+TRG +AVN FYV DA+G+ V+ T+E++R+EIG T+L+VK
Sbjct: 366 TRIFRENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP 425
Query: 415 YSKSPP---QES-GRFSLGN-LFRSRSEKFLYNLG 444
PP Q+S RF + LFR RS L NLG
Sbjct: 426 EQPKPPVAAQDSPTRFLFSSLLFRPRS---LCNLG 457
>gi|147858899|emb|CAN80840.1| hypothetical protein VITISV_043834 [Vitis vinifera]
Length = 440
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/445 (56%), Positives = 320/445 (71%), Gaps = 13/445 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN S AT+I+VDSAN+ G LL++VQVL DL+LII +AYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTD +GNKL ++++ +Q++L A SLR SVGV + E T+IELT
Sbjct: 63 DGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIELT 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+DL+CNV+ AE+WTHN R A+V+++T +ATG I+DP L+ IK+
Sbjct: 123 GSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMIKK 182
Query: 192 LLLYVLKGDRDKRSANTAVSVD---STHKERRLHQMMYADRDYD-MNYAESGSASGRSKP 247
L V KG+ R+ +S + +++RRLHQMM+A RD++ + YA+ + S+P
Sbjct: 183 RLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYAQDTN----SRP 238
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
VTV C+D+ YTVV +R DRPKLLFD VC LTDMQYVV+H TVI EAYQE+YIRH
Sbjct: 239 HVTVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRH 298
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
VDG P+ SEAERQRV CLEAAI+RR EG+ LEL EDR GLLSDVTR+FRENGL + R
Sbjct: 299 VDGLPLRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCIKR 358
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQESGR- 425
A +TT+ +A + F+V D SGN V S+T+E +R++IG TILRVK + +S P E R
Sbjct: 359 AVITTKCGKAKDTFFVTDVSGNXVDSKTVEMIRQQIGQTILRVKGNLNFSPKLPXEGTRS 418
Query: 426 FSLGNLFRSRSEKFLYNLGLIKSCS 450
F GNLF+ RS LIKS S
Sbjct: 419 FXFGNLFKGRS---FQTFKLIKSYS 440
>gi|195607434|gb|ACG25547.1| ACR4 [Zea mays]
Length = 458
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/455 (56%), Positives = 328/455 (72%), Gaps = 24/455 (5%)
Query: 6 SSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIR 65
SS+ DE++K + MNPPRVT+DNTS AT+I VDSANK G LLE+VQVL DL LI++
Sbjct: 11 SSWDSDDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVK 70
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQ----QSLGPRARSFRSLRRSVGVQA 121
+AYISSDG WFMDVF VT+Q+G+K++++ V + I+ +S+GP + S R +VGV+
Sbjct: 71 KAYISSDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRXAVGVEP 130
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ +HT IELTG DRPGLLSEV AVL+ L+CNV+ AE+WTHN R A+V+ +T +GL +
Sbjct: 131 SSDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVS 190
Query: 182 DPDTLAKIKRLLLYVLKGDRDKRSANTAV-SVDSTHKERRLHQMMYADRDY------DMN 234
D + + +IK L V +G R A TAV + +TH ERRLHQMM+ DRDY D
Sbjct: 191 DAERVGRIKGRLYNVFRGR--SRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGR 248
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
A SGS G P+V+V + K Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V
Sbjct: 249 AAASGSNPG---PVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDT 305
Query: 295 ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDV 354
E PEAYQ+YYIRH+DG P++SEAER+R+I CLEAAI+RR SEG+ LEL DR GLLSDV
Sbjct: 306 EGPEAYQDYYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDV 365
Query: 355 TRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA 414
TRIFRENGL+VTRAEV+TRG +AVN FYV DA+G+ V+ T+E++R+EIG T+L+VK
Sbjct: 366 TRIFRENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP 425
Query: 415 YSKSPP---QES-GRFSLGN-LFRSRSEKFLYNLG 444
PP Q+S RF + LFR RS L NLG
Sbjct: 426 EQPKPPVAAQDSPTRFLFSSLLFRPRS---LCNLG 457
>gi|116781547|gb|ABK22147.1| unknown [Picea sitchensis]
Length = 466
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/454 (55%), Positives = 327/454 (72%), Gaps = 19/454 (4%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L R+NPP V++DN + TLIKVDSANK G LLE+VQ+L DLDL I +AYISSD
Sbjct: 12 EYENLERRINPPSVSIDNDTCPDCTLIKVDSANKHGILLEVVQLLTDLDLTISKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPR----ARSFRS-LRRSVGVQAALEHTT 127
G WFMDVFHVTDQ G+KL+++ + E IQQSLG + +R ++ L R VGVQ+ E+T
Sbjct: 72 GGWFMDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRIVGVQSIGEYTA 131
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELTG DRPGLLSE+ AVL+ CNV+ AE WTHN R+A VVY+T E++ PI+D L+
Sbjct: 132 IELTGTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESSNRPIEDEVRLS 191
Query: 188 KIKRLLLYVLKGDRDK-RSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA--SGR 244
IK L VLKG+ D + T S+ TH+ERRLHQ+M+ADRDY+ + S +
Sbjct: 192 TIKGQLSNVLKGNDDSTKGVKTDFSMGLTHRERRLHQLMFADRDYECSSDSSNPSLLDEN 251
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
KP++TVE+C +KGY+VVN++C DRPKLLFD VCTLTDMQYVV+HA++ P A QEYY
Sbjct: 252 MKPVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASITCNLPYALQEYY 311
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLS 364
IRH+DG + +E E+ RVI CLEAAI RR SEG+SLEL DR GLLSDVTR+FRENGLS
Sbjct: 312 IRHMDGCTLDTEGEKHRVIKCLEAAIGRRASEGLSLELSASDRIGLLSDVTRMFRENGLS 371
Query: 365 VTRAEVTTRGSQAVNVFYVVDA-SGN---PVKSETIESVRKEIGLTI-LRVK----DDAY 415
VTRA+VTTRG +A+NVFYV DA SGN + + +E++R+EIG T+ L+VK D AY
Sbjct: 372 VTRADVTTRGDKAINVFYVRDASSGNLAINIDMKVVEAMRREIGHTMFLQVKNMPGDIAY 431
Query: 416 SKSP--PQESGRFSLGNLFRSRSEKFLYNLGLIK 447
+ P + RFS +LF+++ ++ YN +IK
Sbjct: 432 NSLPIDSRSKFRFSFASLFKAQLDRISYNFRMIK 465
>gi|255537131|ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
gi|223549531|gb|EEF51019.1| amino acid binding protein, putative [Ricinus communis]
Length = 442
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/467 (55%), Positives = 321/467 (68%), Gaps = 47/467 (10%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
WS A +DE+EKLV+RM PRV +DN AT++KVDSA K G LLE VQVL DL+L
Sbjct: 3 WS---AYLDEYEKLVIRMTTPRVVIDNGVCPTATVVKVDSARKHGILLEAVQVLTDLNLS 59
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGP----RARSFRSLRRSVGV 119
I++AYISSDG WFMDVFHVTD NGNKL+++ V I+QSLG R F L
Sbjct: 60 IKKAYISSDGRWFMDVFHVTDINGNKLTDESVINYIEQSLGTIHYGRTHDFNGL------ 113
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +ELTG DR GLLSEVFAVL+DL+C+V+ A+VWTHN R+AS++Y+ +G P
Sbjct: 114 ------TALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSP 167
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESG 239
I+D + +I+ L VLKGD D RSA T+VS+ TH ERRLHQMM+ADRDY+
Sbjct: 168 IEDSQHIDRIEARLRNVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILRF 227
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
SA P+VTV++ ++GY+VVN++C DR KLLFD VCTLTDM+YVV+HAT+ +A
Sbjct: 228 SADS---PVVTVQNWVERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKA 284
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFR 359
Y E+YI+H DG PISSE ERQRVI CL+AA++RR SEG+ LELC DR GLL+DVTR FR
Sbjct: 285 YLEFYIKHTDGTPISSEPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFR 344
Query: 360 ENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP 419
ENGL+VTRAE++T A NVFYV DA GNP S+ IESVR+ IGL+ L+VK+ P
Sbjct: 345 ENGLNVTRAEISTSTKTATNVFYVTDAIGNPADSKIIESVRQRIGLSNLKVKE-----LP 399
Query: 420 P----QESGR------------FSLGNLFRSRSEKFLYNLGLIKSCS 450
P QE+ R SLG+L R K LYNLGLI+S S
Sbjct: 400 PLMYHQEAEREEQGVGVAGTVLLSLGSLVR----KNLYNLGLIRSYS 442
>gi|302794344|ref|XP_002978936.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
gi|300153254|gb|EFJ19893.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
Length = 452
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/454 (55%), Positives = 316/454 (69%), Gaps = 28/454 (6%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIK-----VDSANKRGSLLELVQVLNDLDLIIRRA 67
E++ L LR++PP V +DNTS ATLIK VDS NK G LLE+VQVL DLDL I +A
Sbjct: 6 EYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAISKA 65
Query: 68 YISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-----LRRSVGVQAA 122
YISSDG WFMDVFHVTDQ GNKL+++ + + IQQSLG + S + L R V +++
Sbjct: 66 YISSDGGWFMDVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSLRSN 125
Query: 123 LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
E T IEL GRDRPGLLS++ VL D+ CNV+ AEVWTHN R+A VVY+T E TG PI+D
Sbjct: 126 TEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIED 185
Query: 183 PDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESG--- 239
LA IK L L+GD + + T + + H ERRLHQ+M AD + ES
Sbjct: 186 EKKLAVIKARLSQALQGDESGKGSKTDIPMAVLHTERRLHQIMSAD--FAAIQPESTNTF 243
Query: 240 -SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
+A+ +++P ++V++C +KGY+VVN+RC DRPKLLFD VCTLTDM+YVV+HA + +E
Sbjct: 244 VAAADKTRPAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSF 303
Query: 299 AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIF 358
AYQEYYIR +DG + SEAE++ V+ CLEAAI+RRT GI LELC +DR GLLSDVTRIF
Sbjct: 304 AYQEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGLLSDVTRIF 363
Query: 359 RENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKS 418
RENGLSVTRA+V+T+G +AVNVFYV DASGNPV +E+ RKEIG +IL+VKD S
Sbjct: 364 RENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQVKDLTPSSP 423
Query: 419 PPQE----SGRFSLGNLFRSRSEKFLYNLGLIKS 448
Q RFS G FLY+LGLI S
Sbjct: 424 NSQHEVASKSRFSFGT--------FLYSLGLINS 449
>gi|225457853|ref|XP_002268570.1| PREDICTED: uncharacterized protein LOC100250578 isoform 1 [Vitis
vinifera]
gi|147789965|emb|CAN73861.1| hypothetical protein VITISV_007291 [Vitis vinifera]
Length = 447
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/440 (54%), Positives = 318/440 (72%), Gaps = 17/440 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L +R+NPPRV+VDN S TLIKVDS NK G LLE+VQ+L D+DL+I +AYISSD
Sbjct: 12 EYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ GNK+++ + + I+++LGP+ + ++ + VGV + +HT I
Sbjct: 72 GGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL G+DRPGLLSE+ AVL+DL NV+GAEVWTHN R+A VVY+ +AT +DDP L+
Sbjct: 132 ELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTRLSV 191
Query: 189 IKRLLLYVLKG-DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS-- 245
++ L VL+G + D + A T+ S+ TH +RRLHQM++ADRDY E G + +
Sbjct: 192 MEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDY-----EGGGTTIEADY 246
Query: 246 ----KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
KP +T++ C DKGY+ V++ C DRPKL+FD VCTLTDMQYVV+HA++ ++ P A Q
Sbjct: 247 PPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQ 306
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFREN 361
EY+IRH+DG + +E E++RVI CLEAAI+RR SEG+SLELC +DR GLLS+VTR+ RE+
Sbjct: 307 EYFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREH 366
Query: 362 GLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLT-ILRVKDDAYSKSPP 420
GLSVTRA V+T G QA+NVFYV DASG PV +TIE++RKEIG T +L VK + S P
Sbjct: 367 GLSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTP 426
Query: 421 QESGRFSLGNLFRSRSEKFL 440
+ SG F S E+FL
Sbjct: 427 EASGWAKTSFFFGSLFERFL 446
>gi|359492290|ref|XP_003634395.1| PREDICTED: uncharacterized protein LOC100250578 isoform 2 [Vitis
vinifera]
Length = 465
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/440 (54%), Positives = 318/440 (72%), Gaps = 17/440 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L +R+NPPRV+VDN S TLIKVDS NK G LLE+VQ+L D+DL+I +AYISSD
Sbjct: 30 EYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYISSD 89
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ GNK+++ + + I+++LGP+ + ++ + VGV + +HT I
Sbjct: 90 GGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAI 149
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL G+DRPGLLSE+ AVL+DL NV+GAEVWTHN R+A VVY+ +AT +DDP L+
Sbjct: 150 ELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTRLSV 209
Query: 189 IKRLLLYVLKG-DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS-- 245
++ L VL+G + D + A T+ S+ TH +RRLHQM++ADRDY E G + +
Sbjct: 210 MEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDY-----EGGGTTIEADY 264
Query: 246 ----KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
KP +T++ C DKGY+ V++ C DRPKL+FD VCTLTDMQYVV+HA++ ++ P A Q
Sbjct: 265 PPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQ 324
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFREN 361
EY+IRH+DG + +E E++RVI CLEAAI+RR SEG+SLELC +DR GLLS+VTR+ RE+
Sbjct: 325 EYFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREH 384
Query: 362 GLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLT-ILRVKDDAYSKSPP 420
GLSVTRA V+T G QA+NVFYV DASG PV +TIE++RKEIG T +L VK + S P
Sbjct: 385 GLSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTP 444
Query: 421 QESGRFSLGNLFRSRSEKFL 440
+ SG F S E+FL
Sbjct: 445 EASGWAKTSFFFGSLFERFL 464
>gi|356571573|ref|XP_003553951.1| PREDICTED: uncharacterized protein LOC100801859 [Glycine max]
Length = 445
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/446 (54%), Positives = 315/446 (70%), Gaps = 10/446 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN + AT+I+VDS NK G LL++VQV++D++L+I +AYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+V D GNK+ + +V + IQ+ L SLR SVGV EHT IELT
Sbjct: 63 DGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIELT 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+DL CNV+ AE+WTHN+R A+VV++T +++G I DP L+ I+
Sbjct: 123 GTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRD 182
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYD----MNYAESGSASGRSK 246
LL VL+G D ++A T +S T+++RRLHQ+M+ADRDY+ E R
Sbjct: 183 LLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERAGQEELRDRDKRPL 242
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P VTV C +K YTVV +R DRPKLLFD VCTLTDMQYVV+H V EA+QE+YIR
Sbjct: 243 PHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFYIR 302
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
HVDG PISSEAER+R++ CLEAAI+RR SEG+ LELC EDR GLLSD+TR FREN L +
Sbjct: 303 HVDGFPISSEAERERLMQCLEAAIERRASEGMGLELCTEDRVGLLSDITRTFRENSLCIK 362
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQESG- 424
RAE++T +A + FYV D +GNPV + I+S+R++IG +L+VK ++ S PPQ +
Sbjct: 363 RAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPPQPTTI 422
Query: 425 RFSLGNLFRSRSEKFLYNLGLIKSCS 450
F LGN F++RS N LIKS S
Sbjct: 423 GFLLGNFFKARS---FQNFKLIKSYS 445
>gi|356561659|ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
Length = 445
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/446 (54%), Positives = 318/446 (71%), Gaps = 10/446 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN + AT+I+VDS NK G LL++VQV++D++L+I +AYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
D WFMDVF+V D NGNK+ + +V + IQ+ L SLR SVGV EHT IELT
Sbjct: 63 DAVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLENNPSFAPSLRESVGVVPTEEHTVIELT 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+DL CNV+ AE+WTHN+R A+VV++T +++G I DP L+ I+
Sbjct: 123 GTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRD 182
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYD-MNYAESGSASGRSK--- 246
LL VL+G D ++A T +S T+++RRLHQ+M+ADRDY+ + A G R K
Sbjct: 183 LLSNVLRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDRDKRPL 242
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P VTV C +K YTVV +R DRPKLLFD VCTLTDMQYVV+H V EA+QE+YIR
Sbjct: 243 PHVTVVDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQEFYIR 302
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
HVDG PISSEAER+R++ CLEAAI+RR SEG+ LELC EDR GLLSD+TRIFREN L +
Sbjct: 303 HVDGFPISSEAERERLVQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIK 362
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQESG- 424
RAE++T +A + FYV D +GNPV + I+S+R++IG +L+VK ++ S P Q +
Sbjct: 363 RAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPSQPTTI 422
Query: 425 RFSLGNLFRSRSEKFLYNLGLIKSCS 450
F LGN F++RS N LI+S S
Sbjct: 423 GFLLGNFFKARS---FQNFKLIRSYS 445
>gi|302142726|emb|CBI19929.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/440 (54%), Positives = 318/440 (72%), Gaps = 17/440 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L +R+NPPRV+VDN S TLIKVDS NK G LLE+VQ+L D+DL+I +AYISSD
Sbjct: 31 EYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYISSD 90
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ GNK+++ + + I+++LGP+ + ++ + VGV + +HT I
Sbjct: 91 GGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAI 150
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL G+DRPGLLSE+ AVL+DL NV+GAEVWTHN R+A VVY+ +AT +DDP L+
Sbjct: 151 ELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTRLSV 210
Query: 189 IKRLLLYVLKG-DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS-- 245
++ L VL+G + D + A T+ S+ TH +RRLHQM++ADRDY E G + +
Sbjct: 211 MEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDY-----EGGGTTIEADY 265
Query: 246 ----KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
KP +T++ C DKGY+ V++ C DRPKL+FD VCTLTDMQYVV+HA++ ++ P A Q
Sbjct: 266 PPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQ 325
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFREN 361
EY+IRH+DG + +E E++RVI CLEAAI+RR SEG+SLELC +DR GLLS+VTR+ RE+
Sbjct: 326 EYFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREH 385
Query: 362 GLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLT-ILRVKDDAYSKSPP 420
GLSVTRA V+T G QA+NVFYV DASG PV +TIE++RKEIG T +L VK + S P
Sbjct: 386 GLSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTP 445
Query: 421 QESGRFSLGNLFRSRSEKFL 440
+ SG F S E+FL
Sbjct: 446 EASGWAKTSFFFGSLFERFL 465
>gi|357503687|ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497147|gb|AES78350.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 475
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/478 (52%), Positives = 330/478 (69%), Gaps = 44/478 (9%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN + AT+I+VDS NK G LL++VQV++D++L+I++AYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQ--------------SLGPRARSF------- 110
DG WFMDVF+VTD+NGNK+ + +V + IQ+ +L ARS
Sbjct: 63 DGVWFMDVFNVTDRNGNKIKDKEVIDYIQRVGSCLFAISRMLQLTLIYVARSLWKGDFTV 122
Query: 111 ------------RSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEV 158
S+R SVGV EHT IELTG DRPGLLSE+ AVL+DL+CNV+ AE+
Sbjct: 123 LYHRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLRCNVVTAEI 182
Query: 159 WTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS-THK 217
WTHN+R A+VV++T +++G I+DP L+ I+ LL VL+G D ++A TA+S T++
Sbjct: 183 WTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTALSHPGVTYR 242
Query: 218 ERRLHQMMYADRDYDMNYAESGSASGRSK---PLVTVESCTDKGYTVVNLRCPDRPKLLF 274
+RRLHQ+M+ADRDY+ E R K P VTV CT++ YTVV +R DRPKLLF
Sbjct: 243 DRRLHQIMFADRDYER--VERAGLRERDKGPFPHVTVSDCTERDYTVVIMRAKDRPKLLF 300
Query: 275 DAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRT 334
D VCTLTDMQYVV+H V E AYQE+YIRHVDG PISSEAER+R+I CLEAAI+RR
Sbjct: 301 DIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRHVDGFPISSEAERERLIQCLEAAIERRA 360
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
SEG+ LELC EDR GLLSD+TRIFREN L + RAE++T +A + FYV D +GNPV +
Sbjct: 361 SEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPK 420
Query: 395 TIESVRKEIGLTILRVK-DDAYSKSPPQESG-RFSLGNLFRSRSEKFLYNLGLIKSCS 450
+I+S+R++IG T+L+VK + + S PPQ + F G+ F++RS N LI+S S
Sbjct: 421 SIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFFKARS---FQNFKLIRSYS 475
>gi|302809521|ref|XP_002986453.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
gi|300145636|gb|EFJ12310.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
Length = 452
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/454 (55%), Positives = 314/454 (69%), Gaps = 28/454 (6%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIK-----VDSANKRGSLLELVQVLNDLDLIIRRA 67
E++ L LR++PP V +DNTS ATLIK VDS NK G LLE+VQVL DLDL I +A
Sbjct: 6 EYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAISKA 65
Query: 68 YISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-----LRRSVGVQAA 122
YISSDG WFMDVFHVTDQ GNKL ++ + + IQQSLG + S + L R +++
Sbjct: 66 YISSDGGWFMDVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSLRSN 125
Query: 123 LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
E T IEL GRDRPGLLS++ VL D+ CNV+ AEVWTHN R+A VVY+T E TG PI+D
Sbjct: 126 TEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIED 185
Query: 183 PDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESG--- 239
LA IK L L+GD + + T + + H ERRLHQ+M AD + ES
Sbjct: 186 EKKLAVIKARLSQALQGDESGKGSKTDIPMAVLHTERRLHQIMSAD--FAAIQPESTNTF 243
Query: 240 -SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
+A+ +++P ++V++C +KGY+VVN+RC DRPKLLFD VCTLTDM+YVV+HA + +E
Sbjct: 244 VAAADKTRPAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSF 303
Query: 299 AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIF 358
AYQEYYIR +DG + SEAE++ V+ CLEAAI+RRT GI LELC +DR GLLSDVTRIF
Sbjct: 304 AYQEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGLLSDVTRIF 363
Query: 359 RENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKS 418
RENGLSVTRA+V+T+G +AVNVFYV DASGNPV +E+ RKEIG +IL+VKD S
Sbjct: 364 RENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQVKDLTPSSP 423
Query: 419 PPQE----SGRFSLGNLFRSRSEKFLYNLGLIKS 448
Q RFS G FLY+LGLI S
Sbjct: 424 NSQHEVASKSRFSFGT--------FLYSLGLINS 449
>gi|224143611|ref|XP_002336061.1| predicted protein [Populus trichocarpa]
gi|222869846|gb|EEF06977.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/435 (55%), Positives = 320/435 (73%), Gaps = 8/435 (1%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+ KL+ R+NPPRV +DN + +AT+I+VDS NK G LL++VQVL D++L+I +AYISS
Sbjct: 3 EEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG+WFMDVF+V DQ+G K+ + +V + IQ+ L A SLR SVGV + EHT IELT
Sbjct: 63 DGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIELT 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+DL CNV+ AE+WTHN+R A+VV++T ++TG I DP L+ I+
Sbjct: 123 GTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIRE 182
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSA---SGRSKP 247
LL VLKG+ D ++A T +S T +ERRLHQ+M+ADRDY+ +G A S+P
Sbjct: 183 LLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYE-RVERAGLARFEDKSSRP 241
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
VTV + ++ YTVV++R DRPKLLFD VCTLTDM+YVV+H V EAYQE+YIRH
Sbjct: 242 HVTVLN-IERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRH 300
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
VDG P+SS+AER+RV+ CLEAAI+RR SEG+ LELC EDR GLLSD+TRIFREN L + R
Sbjct: 301 VDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKR 360
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQESGR- 425
AE+ T+G +A + FYV D +GNPV + I+S+ ++IG T L VK ++ S PPQE+
Sbjct: 361 AEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTMG 420
Query: 426 FSLGNLFRSRSEKFL 440
+ GNLF++R+ K +
Sbjct: 421 YIFGNLFKARTFKLI 435
>gi|414867236|tpg|DAA45793.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 433
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/440 (57%), Positives = 320/440 (72%), Gaps = 24/440 (5%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVF 80
MNPPRVT+DNTS AT+I VDSANK G LLE+VQVL DL LI+++AYISSDG WFMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 81 HVTDQNGNKLSEDDVSERIQ----QSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRP 136
VT+Q+G+K++++ V + I+ +S+GP + S RR+VGV+ + +HT IELTG DRP
Sbjct: 61 TVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRP 120
Query: 137 GLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYV 196
GLLSEV AVL+ L+CNV+ AE+WTHN R A+V+ +T +GL + D + + +IK L V
Sbjct: 121 GLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNV 180
Query: 197 LKGDRDKRSANTAV-SVDSTHKERRLHQMMYADRDY------DMNYAESGSASGRSKPLV 249
+G R A TAV + +TH ERRLHQMM+ DRDY D A SGS G P+V
Sbjct: 181 FRGR--SRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPG---PVV 235
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
+V + K Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E PEAYQ+YYIRH+D
Sbjct: 236 SVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHID 295
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G P++SEAER+R+I CLEAAI+RR SEG+ LEL DR GLLSDVTRIFRENGL+VTRAE
Sbjct: 296 GCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAE 355
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP---QES-GR 425
V+TRG +AVN FYV DA+G+ V+ T+E++R+EIG T+L+VK PP Q+S R
Sbjct: 356 VSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPPVAAQDSPTR 415
Query: 426 FSLGN-LFRSRSEKFLYNLG 444
F + LFR RS L NLG
Sbjct: 416 FLFSSLLFRPRS---LCNLG 432
>gi|449528978|ref|XP_004171478.1| PREDICTED: uncharacterized LOC101205369 [Cucumis sativus]
Length = 450
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/460 (54%), Positives = 319/460 (69%), Gaps = 25/460 (5%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
W S DE+EKLV+RMN PRV +DN + ATL+KVDSA + G+LLE VQVL DL+L
Sbjct: 3 WPSRL---DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLS 59
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I++AY+SSDG WFMDVFHVTDQNG KL+++ V ++QSLG +R G AL
Sbjct: 60 IKKAYVSSDGRWFMDVFHVTDQNGEKLTDESVISYLEQSLG--TTHYRRNEEFNGTTTAL 117
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
E LTG DR GLLSEVFAVL+DL+C+V+ A+VWTHN R+AS++Y+ +G PI+D
Sbjct: 118 E-----LTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDR 172
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+ I L VLKGD D RSA T+VS+ TH ERRLHQMM+ADRDY+ +A
Sbjct: 173 QKIDTIVARLRSVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILKLNAD- 231
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ P VTV++C ++GY+VV ++C DR KLLFD + TLTDMQYVV+HA + AY E+
Sbjct: 232 -NSPAVTVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEF 290
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YIRH DG PISSEAERQRVI CL+AAI+RR SEG+ LELC EDR GLL+DV R FRENGL
Sbjct: 291 YIRHSDGTPISSEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFRENGL 350
Query: 364 SVTRAEVTTRGSQ-------AVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD--DA 414
+VTRAE++T ++ A+NVFYV D GN +TIESVR+ IGL+ L+VK+
Sbjct: 351 NVTRAEISTTRAEISTTRDMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPST 410
Query: 415 YSKSPPQESGRFSLGN--LFR--SRSEKFLYNLGLIKSCS 450
Y ++ +E F +G LF S + LYNLGLI+SCS
Sbjct: 411 YHQTTEREEQTFGVGGAVLFTLGSMVRRNLYNLGLIRSCS 450
>gi|224082380|ref|XP_002306671.1| predicted protein [Populus trichocarpa]
gi|222856120|gb|EEE93667.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/433 (55%), Positives = 311/433 (71%), Gaps = 5/433 (1%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L R+NPPRV+VDNTS +TLIKVDS NK G LLE+VQ+L DLDLII +AYISSD
Sbjct: 12 EYENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLDLIITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR--RSVGVQAALEHTTIEL 130
G WFMDVFHVTDQ G K+++ + I+++LGP+ + + + VGV + +HT IEL
Sbjct: 72 GGWFMDVFHVTDQQGKKIADLKTIDYIEKALGPKGQEEVTTWSGKPVGVHSVGDHTAIEL 131
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
TGRDRPGLLSE+ AVL++L NV+ AEVWTHN R+A VVY+ + T +DDP L+ ++
Sbjct: 132 TGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRAVDDPTRLSAME 191
Query: 191 RLLLYVLKG-DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS-KPL 248
L +L+G D D++ T+ S+ TH +RRLHQM++ADRDY+ + S KP
Sbjct: 192 DQLKNILRGCDDDEKEGRTSFSMGFTHVDRRLHQMLFADRDYEGGIVATEIHDPPSFKPK 251
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
+TVE C +KGY+VV +RC DR KL+FD VCTLTDMQYVV+HAT+ +++P A QEYYIRH+
Sbjct: 252 ITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHASQEYYIRHM 311
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG + +E E+ RVI CLEAAI+RR SEG+SLELC +DR GLLS+VTRI RENGLSV+RA
Sbjct: 312 DGCVLDTEGEKDRVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRILRENGLSVSRA 371
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLT-ILRVKDDAYSKSPPQESGRFS 427
V T G QA+NVFYV DASGNPV + IE++R+EIG T +L VK S P+ G
Sbjct: 372 GVMTIGEQAMNVFYVRDASGNPVDMKIIEALRREIGHTMMLNVKKPPVSSREPEARGWAK 431
Query: 428 LGNLFRSRSEKFL 440
F + E+FL
Sbjct: 432 TSFFFGNLLERFL 444
>gi|357477003|ref|XP_003608787.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
gi|355509842|gb|AES90984.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
Length = 441
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/457 (52%), Positives = 315/457 (68%), Gaps = 28/457 (6%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
WS A DE+EKLV RM+ PRV +DN +T++K DSA K G LLE VQ+L+DL+L
Sbjct: 3 WS---ACTDEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLF 59
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I++AY+SSDG WFMDVFHVTDQNGNKL+++ V + I+QSL + R +
Sbjct: 60 IKKAYVSSDGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGL------ 113
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
T +EL G DR GLLSEVFAVL++L+C+V+ A+VWTHN R AS++Y+ TG I+D
Sbjct: 114 --TALELKGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDS 171
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+ +++ L YVL+GD D RSA T++S H ERRLHQMM+ADRDY MN S+
Sbjct: 172 QKINRLEARLRYVLQGDSDIRSATTSISDAVIHPERRLHQMMFADRDYQMNPIFKFSSE- 230
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
P+VTV++ ++GY+VVN++C DR KLLFD VC LTDM+YVV+HAT+ +AY E+
Sbjct: 231 --TPVVTVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRVDQAYMEF 288
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YIRH DG PISSE ERQRVI CL+AA++RR+ EG+ LELC EDR GLL++V R FRENGL
Sbjct: 289 YIRHKDGTPISSEPERQRVIQCLQAAVERRSCEGVRLELCTEDRQGLLAEVMRTFRENGL 348
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQE- 422
+VTRA++TT G A NVFY DA G P + IESVR++IGLT L+VK+ ++ E
Sbjct: 349 NVTRADITTTGDLAANVFYATDAIGYPADQKIIESVRQKIGLTNLKVKELPFASHQKVER 408
Query: 423 ---------SGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+ SLG++ R + LYNLGLIKSCS
Sbjct: 409 EDQSVGVGGAVLLSLGSIVR----RNLYNLGLIKSCS 441
>gi|449460443|ref|XP_004147955.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205369 [Cucumis sativus]
Length = 449
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/459 (54%), Positives = 318/459 (69%), Gaps = 24/459 (5%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
W S +DE+EKLV+RMN PRV +DN + ATL+KVDSA + G+LLE VQVL DL+L
Sbjct: 3 WPSR---LDEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLS 59
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I++AY+SSDG WFMDVFHVTDQNG KL+++ V ++QSLG +R G AL
Sbjct: 60 IKKAYVSSDGRWFMDVFHVTDQNGEKLTDESVISYLEQSLG--TTHYRRNEEFNGTTTAL 117
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
E LTG DR GLLSEVFAVL+DL+C+V+ A+VWTHN R+AS++Y+ +G PI+D
Sbjct: 118 E-----LTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDR 172
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+ I L VLKGD D RSA T+VS+ TH ERRLHQMM+ADRDY+ +A
Sbjct: 173 QKIDTIVARLRSVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILKLNAD- 231
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ P VTV++C ++GY+VV ++C DR KLLFD + TLTDMQYVV+HA + AY E+
Sbjct: 232 -NSPAVTVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEF 290
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLS------DVTRI 357
YIRH DG PISSEAERQRVI CL+AAI+RR SEG+ LELC EDR GLL+ DV R
Sbjct: 291 YIRHSDGTPISSEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFDVMRT 350
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD--DAY 415
FRENGL+VTRAE++T A+NVFYV D GN +TIESVR+ IGL+ L+VK+ Y
Sbjct: 351 FRENGLNVTRAEISTTRHMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTY 410
Query: 416 SKSPPQESGRFSLGN--LFR--SRSEKFLYNLGLIKSCS 450
++ +E F +G LF S + LYNLGLI+SCS
Sbjct: 411 HQTTEREEQTFGVGGAVLFTLGSMVRRNLYNLGLIRSCS 449
>gi|224124920|ref|XP_002329846.1| predicted protein [Populus trichocarpa]
gi|222871083|gb|EEF08214.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/463 (54%), Positives = 320/463 (69%), Gaps = 39/463 (8%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
WS A DE+EKLV+RM PRV +DN + KAT++KVDSA K LLE VQVL DL+L
Sbjct: 3 WS---ACSDEYEKLVIRMTTPRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLS 59
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I++AYISSDG WFMDVFHVTD NGNKL+++ V I+QSLG ++ G
Sbjct: 60 IKKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGTIHPG-----KTTGSNGL- 113
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
T +ELTG DR GLLSEVFAVL+DL+C+V+ A+VWTHN R+AS++Y+ +G PI+D
Sbjct: 114 --TALELTGTDRIGLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDT 171
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+ +I+ L VLKGD D RSA T VS+ TH ERRLHQ+M+ADRDY+ S
Sbjct: 172 QHIDRIEARLRNVLKGDNDIRSAKTMVSMAVTHTERRLHQVMFADRDYERKPILQPSGDS 231
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
P+VTV++ ++GY+VVN++C DR KLLFD VCTLTDM+Y+V+HAT+ AY E+
Sbjct: 232 ---PVVTVQNWVERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEF 288
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YIRH DG PISSE ERQRVI CL+AA++RR SEG+ LELC DR GLL+DVTR FRENGL
Sbjct: 289 YIRHTDGTPISSEPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGL 348
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP--- 420
+VTRAE++T G A+NVFYV DA GNP + IESVR++IG++ L+VK+ PP
Sbjct: 349 NVTRAEISTAGDMALNVFYVTDAVGNPADPKLIESVRQKIGVSNLKVKE-----LPPLIY 403
Query: 421 -QESGR------------FSLGNLFRSRSEKFLYNLGLIKSCS 450
QE+ R SLG+L + K LY+LGLI+S S
Sbjct: 404 HQEAEREDQTAGVAGTVLLSLGSLVK----KNLYHLGLIRSYS 442
>gi|224055763|ref|XP_002298641.1| predicted protein [Populus trichocarpa]
gi|222845899|gb|EEE83446.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/437 (55%), Positives = 320/437 (73%), Gaps = 10/437 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+ KL+ R+NPPRV +DN + +AT+I+VDS NK G LL++VQVL D++L+I +AYISS
Sbjct: 3 EEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQ--SLGPRARSFRSLRRSVGVQAALEHTTIE 129
DG+WFMDVF+V DQ+G K+ + +V + IQ+ L A SLR SVGV + EHT IE
Sbjct: 63 DGDWFMDVFNVVDQDGKKIRDKEVMDYIQRVRRLESNASFAPSLRGSVGVMPSEEHTAIE 122
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189
LTG DRPGLLSEV AVL+DL CNV+ AE+WTHN+R A+VV++T ++TG I DP L+ I
Sbjct: 123 LTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTI 182
Query: 190 KRLLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSA---SGRS 245
+ LL VLKG+ D ++A T +S T +ERRLHQ+M+ADRDY+ +G A S
Sbjct: 183 RELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYE-RVERAGLARFEDKSS 241
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P VTV + ++ YTVV++R DRPKLLFD VCTLTDM+YVV+H V EAYQE+YI
Sbjct: 242 RPHVTVLN-IERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYI 300
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RHVDG P+SS+AER+RV+ CLEAAI+RR SEG+ LELC EDR GLLSD+TRIFREN L +
Sbjct: 301 RHVDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCI 360
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQESG 424
RAE+ T+G +A + FYV D +GNPV + I+S+ ++IG T L VK ++ S PPQE+
Sbjct: 361 KRAEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETT 420
Query: 425 R-FSLGNLFRSRSEKFL 440
+ GNLF++R+ K +
Sbjct: 421 MGYIFGNLFKARTFKLI 437
>gi|255558468|ref|XP_002520259.1| amino acid binding protein, putative [Ricinus communis]
gi|223540478|gb|EEF42045.1| amino acid binding protein, putative [Ricinus communis]
Length = 447
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/438 (55%), Positives = 313/438 (71%), Gaps = 13/438 (2%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L R+NPPRV+VDNTS + TLIKVDS NK G LLE+VQ+L DLD II +AYISSD
Sbjct: 12 EYENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLDFIITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMD+FHVTDQ G K+ + + I+++LGP+ + L+ + VGV + ++T I
Sbjct: 72 GGWFMDIFHVTDQQGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRVGVHSVGDYTAI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL GRDRPGLLSE+ AVL++L NV AEVWTHN R+A VVY+ T P+DDP L+
Sbjct: 132 ELIGRDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTCRPVDDPTRLSV 191
Query: 189 IKRLLLYVLKG-DRDKRSANTAVSVDSTHKERRLHQMMYADRDYD----MNYAESGSASG 243
++ L +L+G + D++++ T+ S+ TH +RRLHQM +ADRDY+ N E S+
Sbjct: 192 MEEQLKNILRGCEDDEKASRTSFSMGFTHIDRRLHQMFFADRDYEGGGVTNEVEYPSSF- 250
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
KP +TVE C +KGY+VV++ C DR KLLFD VCTLTDMQYVV+HAT+ ++ P A QEY
Sbjct: 251 --KPKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSDGPYASQEY 308
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YIRH+DG + +E E++RVI CLEAAI+RR EG+SLELC +DR GLLS+VTR+ RENGL
Sbjct: 309 YIRHMDGCTLDTEGEKERVIKCLEAAIRRRVCEGLSLELCAKDRVGLLSEVTRVLRENGL 368
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLT-ILRVKDDAYSKSPPQE 422
SVTRA VTT G QA+NVFYV D+SGNPV +TIE++RKEIG T +L VK S S P+
Sbjct: 369 SVTRAGVTTVGEQAMNVFYVRDSSGNPVDMKTIEALRKEIGHTMMLNVKKTPVSASQPEA 428
Query: 423 SGRFSLGNLFRSRSEKFL 440
G F + E+FL
Sbjct: 429 KGWAKTSFFFGNLLERFL 446
>gi|224066763|ref|XP_002302203.1| predicted protein [Populus trichocarpa]
gi|222843929|gb|EEE81476.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/432 (55%), Positives = 308/432 (71%), Gaps = 4/432 (0%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L R+NPPRV+VDNTS +TL+KVDS NK G LLE+VQVL DLDLII +AYISSD
Sbjct: 12 EYENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLDLIITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR--RSVGVQAALEHTTIEL 130
G WFMDVFHVTDQ G K+++ + I+++LGP+++ + + VGV + HT IEL
Sbjct: 72 GGWFMDVFHVTDQQGKKITDIKTIDYIEKALGPKSQEEVTTWADKRVGVHSVGGHTAIEL 131
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
G+DRPGLLSE+ AVL++L NV+ AEVWTHNSR+A VVY+ + T + DP L+ ++
Sbjct: 132 IGKDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDTTSRAVADPTRLSIME 191
Query: 191 RLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS-KPLV 249
L +L+G + + T+ S+ TH +RRLHQM++ADRDY+ + S KP +
Sbjct: 192 DQLKNILRGCENDEAGRTSFSMGFTHVDRRLHQMLFADRDYEGGIVATEVDYPPSIKPKI 251
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
TVE C DKGY+VV +RC DR KL+FD VCTLTDMQYVV+HAT+ ++ P A QEYYIRH+D
Sbjct: 252 TVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYYIRHMD 311
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G + +E E++RVI CLEAAI+RR SEG+SLELC +DR GLLS+VTRI RENGL+V+RA
Sbjct: 312 GCVLDTEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRILRENGLAVSRAG 371
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLT-ILRVKDDAYSKSPPQESGRFSL 428
V T G QA NVFYV DASGNPV ++ IE++RKEIG T +L VK S P+ G
Sbjct: 372 VMTIGEQATNVFYVRDASGNPVDTKIIEALRKEIGHTMMLNVKKTPASSREPEARGWAKT 431
Query: 429 GNLFRSRSEKFL 440
F + E+FL
Sbjct: 432 SFFFGNLLERFL 443
>gi|18411317|ref|NP_565146.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699222|ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699224|ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|79321337|ref|NP_001031289.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|186495930|ref|NP_001117608.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|13430820|gb|AAK26032.1|AF360322_1 unknown protein [Arabidopsis thaliana]
gi|2829923|gb|AAC00631.1| Similar to uridylyl transferases [Arabidopsis thaliana]
gi|21280959|gb|AAM44939.1| unknown protein [Arabidopsis thaliana]
gi|22138096|gb|AAM93428.1| ACR3 [Arabidopsis thaliana]
gi|222424164|dbj|BAH20041.1| AT1G76990 [Arabidopsis thaliana]
gi|332197796|gb|AEE35917.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197797|gb|AEE35918.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197798|gb|AEE35919.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197799|gb|AEE35920.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197800|gb|AEE35921.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
Length = 453
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/437 (53%), Positives = 311/437 (71%), Gaps = 7/437 (1%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L R+NPP V++DNTS ++ TL+KVDS NK G LLE+VQVL DLDL I +AYISSD
Sbjct: 12 EYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ GNK+++ + I++ LGP+ + S + VGV + +HT+I
Sbjct: 72 GGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
E+ RDRPGLLSEV AVL+DL NV+ AE WTHN R+A V+Y+ AT +DDP+ L+
Sbjct: 132 EIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSS 191
Query: 189 IKRLLLYVLKG--DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
++ L VL+G ++D++ A T++S+ STH +RRLHQM +ADRDY+ SAS +
Sbjct: 192 MEEQLNNVLRGCEEQDEKFARTSLSIGSTHVDRRLHQMFFADRDYEAVTKLDDSASCGFE 251
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P +TVE C +KGY+V+N+ C DRPKL+FD VCTLTDMQY+V+HAT+ + A QEY+IR
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H DG + +E E++RV+ CLEAAI RR SEG SLELC +DR GLLS+VTRI RE+GLSV+
Sbjct: 312 HKDGCTLDTEGEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRILREHGLSVS 371
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRF 426
RA VTT G QAVNVFYV DASGNPV +TIE++R EIG +++ + +E G+
Sbjct: 372 RAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSRKWKEEGQA 431
Query: 427 SLGNLFRSRSEKFLYNL 443
G + +++ F NL
Sbjct: 432 GTGGGW-AKTSFFFGNL 447
>gi|357148614|ref|XP_003574833.1| PREDICTED: uncharacterized protein LOC100821029 [Brachypodium
distachyon]
Length = 472
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 267/475 (56%), Positives = 322/475 (67%), Gaps = 29/475 (6%)
Query: 1 MDCWS--SSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLN 58
M C S + VVDEFEKLV+RMNPPRVTVDN S+ ATL+KVDSANK G+LLE+VQVL
Sbjct: 2 MACGSRHGNAEVVDEFEKLVIRMNPPRVTVDNESDITATLVKVDSANKYGTLLEVVQVLT 61
Query: 59 DLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFR--SLRRS 116
DL L I RAYISSDGEWFMDVFHV D+ GNKL + V +RI+QSLG + SFR
Sbjct: 62 DLKLTINRAYISSDGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRATDAETE 121
Query: 117 VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEAT 176
A + T IEL GRDRPGLLSEVFAVL++L+CN+ +EVWTH+ RMA++V +T T
Sbjct: 122 TAAAAMAQATAIELVGRDRPGLLSEVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADT 181
Query: 177 GLPI---DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYAD--RDY 231
G I DDP+ L +KRLL +VL+G R+A A + H RRLHQMM AD
Sbjct: 182 GAGIEEDDDPERLDTVKRLLRHVLRG----RAAVQARPGGALHAHRRLHQMMSADLRSRA 237
Query: 232 DMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHAT 291
A +V VE C ++GYTVVN+RC DR KLLFD VCTLTDMQYVV+H T
Sbjct: 238 AAAGAGDEEEEDCEGVVVGVEECAERGYTVVNVRCRDRAKLLFDTVCTLTDMQYVVFHGT 297
Query: 292 VIAESPEAYQEYYIRHVDGNPISSEAERQRVI--NCLEAAIKRRTSEG-ISLELCCEDRA 348
VIAE EAYQE+YIRH+D +S + R CL+AAI+RR +EG + LEL CEDR
Sbjct: 298 VIAEGSEAYQEFYIRHLDDGAAASASAADRARLRRCLQAAIQRRNTEGVVGLELRCEDRP 357
Query: 349 GLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN-PVKSETIESVRKEIGLTI 407
GLLSDVTR+FRE+GLSVT AEV T G+QA +VF VV ASG+ PV + +++VR E+G I
Sbjct: 358 GLLSDVTRVFREHGLSVTHAEVATWGTQAADVFRVVTASGDAPVPARAVDAVRAEVGEDI 417
Query: 408 LRVKDDAYSKSPPQESG------------RFSLGNLFRSRSEKFLYNLGLIKSCS 450
L +KDD + S G R SLGN+ RSRSEKFL+NLGLI+SCS
Sbjct: 418 LFIKDDTLAASANAVGGPVSPTGRGGGDGRRSLGNMIRSRSEKFLFNLGLIRSCS 472
>gi|255543679|ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
gi|223547913|gb|EEF49405.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/445 (54%), Positives = 322/445 (72%), Gaps = 10/445 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN AT+I+VDS NK G LL++VQVL D++L+I++AYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDVCEDATVIQVDSVNKHGILLQVVQVLTDMNLVIKKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+V DQ+GNK+ + +V IQ+ L A SLR SVGV + +HT+IEL+
Sbjct: 63 DGGWFMDVFNVIDQDGNKIRDKEVIGYIQRRLESNASFAPSLRGSVGVMPSEDHTSIELS 122
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+DL+CNV+ AE+WTHN+R A+VV++T ++TG + DP L+ IK
Sbjct: 123 GNDRPGLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTIKE 182
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYD-MNYAESGSASGR-SKPL 248
LL VLKG+ D ++A +S T +ERRLHQ+M+ADRDY+ ++ G + S+P
Sbjct: 183 LLCNVLKGNNDLKAAKMTLSPPGITSRERRLHQIMFADRDYERVDRVGLGRLEDKSSRPH 242
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIRH 307
VTV + +K Y+V+ +R DRPKLLFD VCTLTDM+YVV+H V A EAYQE+YIRH
Sbjct: 243 VTVLN-IEKDYSVITMRSKDRPKLLFDIVCTLTDMEYVVFHGMVNAGRKEEAYQEFYIRH 301
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
VDG PISS+AER+RVI CLEAAI+RR SEG+ LELC EDR GLLSD+TR FREN L + R
Sbjct: 302 VDGLPISSDAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRTFRENSLCIKR 361
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDD-AYSKSPPQESGR- 425
AE++T+G A + FYV D +G+PV + ++S+ ++IG T L+VK + S P QE+
Sbjct: 362 AEISTKGGIAKDTFYVTDVTGSPVDPKIVDSICRQIGQTRLQVKQNLTLSPKPAQETTMG 421
Query: 426 FSLGNLFRSRSEKFLYNLGLIKSCS 450
+ LG LF++R+ N LI+S S
Sbjct: 422 YLLGTLFKART---FQNFKLIRSYS 443
>gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
Length = 453
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/437 (53%), Positives = 310/437 (70%), Gaps = 7/437 (1%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L R+NPP V++DNTS ++ TL+KVDS NK G LLE+VQVL DLDL I +AYISSD
Sbjct: 12 EYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ GNK+++ + I++ LGP+ + S + VGV + +HT+I
Sbjct: 72 GGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
E+ RDRPGLLSEV AVL+DL NV+ AE WTHN R+A V+Y+ AT +DDP+ L+
Sbjct: 132 EIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSS 191
Query: 189 IKRLLLYVLKG--DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
++ L VL+G ++D++ A T++S+ STH +RRLHQM +ADRDY+ SAS +
Sbjct: 192 MEEQLNNVLRGCEEQDEKFARTSLSIGSTHVDRRLHQMFFADRDYEAVTKLDDSASCGFE 251
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P +TVE C +KGY+V+N+ C DRPKL+FD VCTLTDMQY+V+HAT+ + A QEY+IR
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H DG + +E E++R + CLEAAI RR SEG SLELC +DR GLLS+VTRI RE+GLSV+
Sbjct: 312 HKDGCTLDTEGEKERXVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRILREHGLSVS 371
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRF 426
RA VTT G QAVNVFYV DASGNPV +TIE++R EIG +++ + +E G+
Sbjct: 372 RAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSRKWKEEGQA 431
Query: 427 SLGNLFRSRSEKFLYNL 443
G + +++ F NL
Sbjct: 432 GTGGGW-AKTSFFFGNL 447
>gi|255540149|ref|XP_002511139.1| amino acid binding protein, putative [Ricinus communis]
gi|223550254|gb|EEF51741.1| amino acid binding protein, putative [Ricinus communis]
Length = 452
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/454 (52%), Positives = 314/454 (69%), Gaps = 20/454 (4%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
VDE+ KL+ RMN PRV +DN + AT+++VD+ N+ G+LL++VQVL DL+LII +AYIS
Sbjct: 5 VDEYAKLIRRMNSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLIITKAYIS 64
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIEL 130
SDG WFMDVF+VT +GNK+ ++ + I+++L S+R S+ + + EHT+IEL
Sbjct: 65 SDGVWFMDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTSIEL 124
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
+G DRPGLLSEV AVL+DL C+V+ AE+WTHN R+A++++IT ++TG +++P L+ IK
Sbjct: 125 SGTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLSLIK 184
Query: 191 RLLLYVLKGDRDKRSANTAVSV-DSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLV 249
LL VLKG+ RS ++S + TH RRLHQMM+A RD++ ES G +P V
Sbjct: 185 ELLRNVLKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFER--LESAKEKG-VEPCV 241
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
V C DK YTVV +RC DRPKLLFD V LTDMQYVV+H TVI EAYQEYYIRHVD
Sbjct: 242 IVSDCADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIRHVD 301
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSE-----------GISLELCCEDRAGLLSDVTRIF 358
G PISSEAERQRV CLEAAI+RR SE G+ LELC +DR GLLSD+TRIF
Sbjct: 302 GLPISSEAERQRVTECLEAAIERRASERYTHRNVTLSQGLELELCTDDRFGLLSDITRIF 361
Query: 359 RENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD--DAYS 416
RENGLS+ RAE++T+ +A + F+V D +GN V T+ +R++IG TIL K + S
Sbjct: 362 RENGLSIQRAEISTKNGKAKDTFFVTDVAGNSVDPTTVRMIREQIGQTILHAKGKLNVLS 421
Query: 417 KSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
K P + F G+ F+ RS ++ GL+KS S
Sbjct: 422 KFPQETPRSFLFGSFFKGRS---FHHFGLVKSYS 452
>gi|356540171|ref|XP_003538563.1| PREDICTED: Protein-PII uridylyltransferase [Glycine max]
Length = 441
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/457 (53%), Positives = 319/457 (69%), Gaps = 28/457 (6%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
W +S DE+EKL++RM+ PRV +DN+ ATL+KVDSA + G LL+ VQVL DL+L
Sbjct: 3 WPAS---TDEYEKLIIRMSTPRVVIDNSVCSSATLVKVDSARRHGILLDAVQVLTDLNLS 59
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I++AYIS+DG+WFMDVFHVTDQNGNK+ ++ V + I+QSLG + RS G+
Sbjct: 60 IKKAYISADGKWFMDVFHVTDQNGNKIMDESVLKYIEQSLGNI--HYGRTNRSNGL---- 113
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
T +ELTG DR GLLSEVFAVL+DL+C+V A+VWTHN R+AS++Y+ ++G I+D
Sbjct: 114 --TALELTGSDRVGLLSEVFAVLADLQCDVADAKVWTHNGRIASLIYVKDCSSGSAIEDS 171
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+ KI+ L VLKGD D RSA +VS+ H ERRLHQ+M+ DRDY+ ++
Sbjct: 172 QKINKIELRLRNVLKGDNDIRSAKMSVSMAVMHTERRLHQLMFVDRDYERTPILKLTSD- 230
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLVTV++ +GY+VVN++C DR KLLFD VC LTDM+YVV+HAT+ AY E+
Sbjct: 231 --NPLVTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYLEF 288
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YIRH DG PISSE ERQRVI CL+AA++RR SEG+ LELC EDR GLL++V R FRENGL
Sbjct: 289 YIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVMRTFRENGL 348
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD-----DAYSKS 418
+VTRAE++T G+ A N+FYV DA G P S+ IESVR++IGL+ L VK+ ++
Sbjct: 349 NVTRAEISTIGNMATNIFYVTDAIGIPADSKIIESVRQKIGLSNLEVKELPLINHQEAEG 408
Query: 419 PPQESG-----RFSLGNLFRSRSEKFLYNLGLIKSCS 450
Q G S+G+L R + LY+LGLIKSCS
Sbjct: 409 EDQAVGIGGAVLLSIGSLLR----RNLYHLGLIKSCS 441
>gi|297832736|ref|XP_002884250.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
gi|297330090|gb|EFH60509.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/432 (53%), Positives = 306/432 (70%), Gaps = 11/432 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN ++ AT+I+VDS NK G+LLE+VQVL D++L+I++AYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF-RSLRRSVGVQAALEHTTIEL 130
DG WFMDVF V DQ+GNK+ + V + IQ+ + A F LR SVGV E+T IEL
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIEL 123
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
G DRPGLLSEV AVL+DL CNV+ AE+WTHN+R A+V+++T T I DP L+ IK
Sbjct: 124 AGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNLTNSAITDPIRLSTIK 183
Query: 191 RLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVT 250
LL V++ + R+A T S TH+ERRLHQ+M+ DRDY+ SAS S L+
Sbjct: 184 ELLCNVVRTNSGSRAAKTVFSCSDTHRERRLHQIMFDDRDYEGVKRAKTSASRPSVTLMN 243
Query: 251 VESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDG 310
+E K YTVV +R DRPKL+FD VCTLTDMQYVV+H V E EAYQE+YIRHVDG
Sbjct: 244 IE----KDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDG 299
Query: 311 NPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
PI+SEAE++RVI CLEAAI+RR SEG+ LEL EDR GLLSD+TR FREN L++ RAE+
Sbjct: 300 LPINSEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRAEI 359
Query: 371 TTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDD------AYSKSPPQESG 424
+TR +A + FYV D +GNPV+S+ +ES+R++IG++ L+VK S+ + +
Sbjct: 360 STREGKAKDTFYVTDVTGNPVESKIVESIRQQIGVSKLKVKKKEDCSVLGTSRPSHETTM 419
Query: 425 RFSLGNLFRSRS 436
+ L N+F+ +S
Sbjct: 420 GYLLSNIFKPKS 431
>gi|219885449|gb|ACL53099.1| unknown [Zea mays]
gi|414867237|tpg|DAA45794.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 440
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/436 (57%), Positives = 316/436 (72%), Gaps = 24/436 (5%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
RVT+DNTS AT+I VDSANK G LLE+VQVL DL LI+++AYISSDG WFMDVF VT+
Sbjct: 12 RVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVTN 71
Query: 85 QNGNKLSEDDVSERIQ----QSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLS 140
Q+G+K++++ V + I+ +S+GP + S RR+VGV+ + +HT IELTG DRPGLLS
Sbjct: 72 QSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRPGLLS 131
Query: 141 EVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGD 200
EV AVL+ L+CNV+ AE+WTHN R A+V+ +T +GL + D + + +IK L V +G
Sbjct: 132 EVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNVFRGR 191
Query: 201 RDKRSANTAV-SVDSTHKERRLHQMMYADRDY------DMNYAESGSASGRSKPLVTVES 253
R A TAV + +TH ERRLHQMM+ DRDY D A SGS G P+V+V +
Sbjct: 192 --SRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPG---PVVSVVN 246
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
K Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E PEAYQ+YYIRH+DG P+
Sbjct: 247 WLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGCPV 306
Query: 314 SSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTR 373
+SEAER+R+I CLEAAI+RR SEG+ LEL DR GLLSDVTRIFRENGL+VTRAEV+TR
Sbjct: 307 NSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTR 366
Query: 374 GSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP---QES-GRFSLG 429
G +AVN FYV DA+G+ V+ T+E++R+EIG T+L+VK PP Q+S RF
Sbjct: 367 GDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPPVAAQDSPTRFLFS 426
Query: 430 N-LFRSRSEKFLYNLG 444
+ LFR RS L NLG
Sbjct: 427 SLLFRPRS---LCNLG 439
>gi|224074729|ref|XP_002304443.1| predicted protein [Populus trichocarpa]
gi|222841875|gb|EEE79422.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/463 (53%), Positives = 316/463 (68%), Gaps = 39/463 (8%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
WS A +DE+EKLV+RM PRV +DN KAT++KVDSA K G LLE VQVL DL+L
Sbjct: 3 WS---ACLDEYEKLVIRMTTPRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLS 59
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I++AYISSDG WFMDVFHVTD NGNKL++ V I+QSL R G
Sbjct: 60 IKKAYISSDGRWFMDVFHVTDLNGNKLTDKSVINYIEQSLVTIHYG-----RKTGSNGL- 113
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
T +ELTG DR GLLSEVFAVL+DL+CNV+ A+VWTHN R+A+++++ +G PI+D
Sbjct: 114 --TALELTGTDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDT 171
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+ +I+ L VLKGD D RSA T VS+ TH ERRLHQMM+ADRDY+ N S
Sbjct: 172 QQIDRIEARLRNVLKGDNDIRSAKTMVSMAVTHTERRLHQMMFADRDYERNPILQPSGDS 231
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
P+VTV++ ++GY+VVN++C DR KLLFD VCTLTDM+Y+V+HAT+ AY E+
Sbjct: 232 ---PVVTVQNWVERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEF 288
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
YIRH DG PISSE ERQRVI CL+AA++RR SEG+ LELC DR LL+DVTR FRENGL
Sbjct: 289 YIRHTDGTPISSEPERQRVIQCLQAAVERRVSEGVRLELCTLDRQCLLADVTRTFRENGL 348
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP--- 420
+VTRAE++T A+NVFYV DA GN + IESVR++IG++ L+VK+ PP
Sbjct: 349 NVTRAEISTTRDMALNVFYVTDAIGNAADPKLIESVRQKIGMSSLKVKE-----LPPLVY 403
Query: 421 -QESGR------------FSLGNLFRSRSEKFLYNLGLIKSCS 450
QE+ R SLG+L + + LY+LGLI+S S
Sbjct: 404 HQEAEREDQTAGVAGTVLLSLGSLVK----RNLYHLGLIRSYS 442
>gi|356509344|ref|XP_003523410.1| PREDICTED: uncharacterized protein LOC100789173 [Glycine max]
Length = 445
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/439 (53%), Positives = 317/439 (72%), Gaps = 17/439 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E RMNPPRV++DN S TLIKVDS NK G LLE+VQ+L DLD II +AYISSD
Sbjct: 12 EYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ G K+++ + I+++LGP+++S ++ + VGV + +HT I
Sbjct: 72 GGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSVGDHTAI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL GRDRPGLLSE+ AVL++L NV AEVWTHN R+A V+Y+ ++AT +D+ + L+
Sbjct: 132 ELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYV-NDATNQAVDEANRLSL 190
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS--K 246
++ L +L+G ++ A T+ S+ STH +RRLHQM++ADRDY+ +YA + +
Sbjct: 191 MEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYE-SYAVAREVDSPPSLR 249
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P +T+E C +KGY+VV+++C DR KL+FD VCTLTDMQYVV+HATV ++ P A QEY+IR
Sbjct: 250 PKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIR 309
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H+DG + ++ E++RVI C+EAAI+RR SEG+SLELC +DR GLLS+VTRI RENGL+V
Sbjct: 310 HMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVC 369
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL-RVKDDAYSKSPPQESG- 424
RA V+TRG QA+NVFYV DASGNPV +T+E++RKEIG T++ VK + P+ G
Sbjct: 370 RAGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAPETRGW 429
Query: 425 ---RFSLGNLFRSRSEKFL 440
F GNL E+FL
Sbjct: 430 AKTSFFFGNLL----ERFL 444
>gi|356515959|ref|XP_003526664.1| PREDICTED: uncharacterized protein LOC100797293 [Glycine max]
Length = 445
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/435 (53%), Positives = 313/435 (71%), Gaps = 9/435 (2%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E RMNPPRV+VDN S TLIK+DS NK G LLE+VQ+L DLD +I +AYISSD
Sbjct: 12 EYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ G K+++ + I+++LGP+++S ++ + VGV + ++T I
Sbjct: 72 GGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHVGVHSVGDYTAI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL GRDRPGLLSE+ AVL++L NV AEVWTHN R+A V+Y+ ++AT DDP L+
Sbjct: 132 ELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYV-NDATNQVADDPKRLSL 190
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS--K 246
++ L +L+G ++ A T+ S+ STH +RRLHQM++ADRDY+ +YA + +
Sbjct: 191 MEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYE-SYAVAREVDSPPSLR 249
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P +T+E C +KGY+VV+++C DR KL+FD VCTLTDMQYVV+HATV ++ P A QEY+IR
Sbjct: 250 PRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIR 309
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H+DG + ++ E++RVI C+EAAI+RR SEG+SLELC +DR GLLS+VTRI RENGLSV
Sbjct: 310 HMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLSVC 369
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL-RVKDDAYSKSPPQESGR 425
RA V+TRG QA+NVFYV DASGNPV +T+E++ KEIG T++ VK + P+ G
Sbjct: 370 RAGVSTRGEQALNVFYVRDASGNPVDMKTMEALCKEIGKTMMVDVKRVPSNTKAPETRGW 429
Query: 426 FSLGNLFRSRSEKFL 440
F + E+FL
Sbjct: 430 AKTSFFFGNLLERFL 444
>gi|356497179|ref|XP_003517440.1| PREDICTED: uncharacterized protein LOC100780903 [Glycine max]
Length = 441
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/452 (52%), Positives = 316/452 (69%), Gaps = 25/452 (5%)
Query: 9 AVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAY 68
A DE+EKL++RMN PRV +DN+ ATL+KVDSA + G LL+ V+VL DL+L I++AY
Sbjct: 5 ACTDEYEKLIIRMNTPRVVIDNSVFSSATLVKVDSARRHGILLDAVEVLADLNLSIKKAY 64
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTI 128
IS+DG+WFMDVFHVTDQNGNK+ ++ V + I+QSLG +L + T +
Sbjct: 65 ISADGKWFMDVFHVTDQNGNKIIDESVLKYIEQSLGNIHYGRTNLSNGL--------TAL 116
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
ELTG DR GLLSEVFAVL+DL+C+V+ ++VWTHN R+AS++Y+ ++G I+D + K
Sbjct: 117 ELTGTDRVGLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINK 176
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
I+ L VLKGD D RSA + S+ H ERRLHQ+M+ DRDY+ ++ S
Sbjct: 177 IELRLRNVLKGDNDIRSAKISFSMAVMHTERRLHQLMFVDRDYERAPILKLTSDNAS--- 233
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
VTV++ +GY+VVN++C DR KLLFD VC LTDM+YVV+HAT+ + AY E+YIRH
Sbjct: 234 VTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHK 293
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG PISSE ERQRVI CL+AA++RR SEG+ LELC EDR GLL++V R FRENGL+VTRA
Sbjct: 294 DGTPISSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVVRTFRENGLNVTRA 353
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD-----DAYSKSPPQES 423
E++T G+ A N+FYV DA GNP S+ IESVR++IGL+ L VK+ ++ Q
Sbjct: 354 EISTIGNMAKNIFYVTDAIGNPADSKIIESVRQKIGLSNLEVKELPLINHQEAEREDQAV 413
Query: 424 GR-----FSLGNLFRSRSEKFLYNLGLIKSCS 450
G S+G+L R + LY+LGLIKSCS
Sbjct: 414 GMGGAVLLSIGSLVR----RNLYHLGLIKSCS 441
>gi|212274877|ref|NP_001130980.1| uncharacterized protein LOC100192085 [Zea mays]
gi|194689578|gb|ACF78873.1| unknown [Zea mays]
gi|194690618|gb|ACF79393.1| unknown [Zea mays]
gi|194701104|gb|ACF84636.1| unknown [Zea mays]
gi|195614180|gb|ACG28920.1| ACR4 [Zea mays]
gi|223949731|gb|ACN28949.1| unknown [Zea mays]
gi|414871683|tpg|DAA50240.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/442 (52%), Positives = 312/442 (70%), Gaps = 12/442 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE++ + +MNPPR+ +DN S+ +AT+++VDSAN+ G LLE++QV+ DL+L+I +AYI+S
Sbjct: 16 DEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYITS 75
Query: 72 DGEWFMDVFHVTDQNGNKLSED----DVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT 127
DG WFMDVF+VTD+ G K+ ++ + + I++SLG +R S RRSV V AA +H
Sbjct: 76 DGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNI 135
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELTG DRPGLLSEV AVL+ LKCNV+ AE+WTHN+R A+V+ +T E TGL + D + L
Sbjct: 136 IELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLE 195
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
+I+ L Y+ +G R A + +TH ERRLHQMM D DY+ ++ S R P
Sbjct: 196 RIREKLSYLFRGGNLSRGATVSSRTATTHTERRLHQMMLDDGDYEQLQRQAPGQSQR--P 253
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
VTV + DK Y+VV +RC DR KLLFD VCTLTD+QYVV+HA + A+ +AYQE+Y+RH
Sbjct: 254 NVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRH 313
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
V+G+P+++E ER RVI CLEAAI+RR SEG+ LELC D+ GLLS+VTRIFREN L+VTR
Sbjct: 314 VNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTR 373
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESG--R 425
AEVTTRG AVN FYV ++G V + I+S+R+ IG + L+VK A P ++
Sbjct: 374 AEVTTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVKGQAEPPEPQKKESPTW 432
Query: 426 FSLGNLFRSRSEKFLYNLGLIK 447
F NLFR RS LY+ G ++
Sbjct: 433 FLFANLFRPRS---LYSFGFMR 451
>gi|242038905|ref|XP_002466847.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
gi|241920701|gb|EER93845.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
Length = 453
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/448 (52%), Positives = 316/448 (70%), Gaps = 22/448 (4%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE++ + +MNPPR+ +DN S+ +AT+++VDSAN+ G LLE++QV+ DL+L+I +AYI+S
Sbjct: 16 DEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVISKAYITS 75
Query: 72 DGEWFMDVFHVTDQNGNKLSED----DVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT 127
DG WFMDVF+VTD+ G K+ ++ + + I++SLG +R S RRSV V AA +H
Sbjct: 76 DGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNV 135
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELTG DRPGLLSEV AVL+ LKCNV+ AE+WTHN+R A+V+ +T E T L + D + L
Sbjct: 136 IELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNARAAAVMRVTDEDTRLAVTDTERLE 195
Query: 188 KIKRLLLYVLKGDRDKRSANTAVS--VDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
+I+ L Y+L+G R A AVS +TH ERRLHQMM D DY+ + S R
Sbjct: 196 RIREKLSYLLRGGNLSRGAAMAVSSGTATTHTERRLHQMMLDDCDYEQLQQLAPGQSQR- 254
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P VTV + DK Y+VV +RC DRPKLLFD VCTLTD+QYVV+HA + A+ +AYQE+Y+
Sbjct: 255 -PNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYV 313
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RHV+G+P+++E ER RVI CLEAAI+RR SEG+ LELC D+ GLLS+VTRIFREN L+V
Sbjct: 314 RHVNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTV 373
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGR 425
TRAEVTTRG AVN FYV ++G V + I+S+R+ IG + L+VK + PQE+ +
Sbjct: 374 TRAEVTTRGRMAVNTFYVRGSTGEDVDQKAIDSIRQAIGHS-LQVK----GQPEPQEAQK 428
Query: 426 ------FSLGNLFRSRSEKFLYNLGLIK 447
F NLFR RS LY+ G ++
Sbjct: 429 KESPTWFLFANLFRPRS---LYSFGFMR 453
>gi|15232835|ref|NP_186848.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
gi|6513932|gb|AAF14836.1|AC011664_18 unknown protein [Arabidopsis thaliana]
gi|22138102|gb|AAM93431.1| ACR6 [Arabidopsis thaliana]
gi|26451489|dbj|BAC42843.1| unknown protein [Arabidopsis thaliana]
gi|28973303|gb|AAO63976.1| unknown protein [Arabidopsis thaliana]
gi|332640226|gb|AEE73747.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
Length = 433
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/396 (56%), Positives = 292/396 (73%), Gaps = 5/396 (1%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN ++ AT+I+VDS NK G+LLE+VQVL D++L+I++AYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF-RSLRRSVGVQAALEHTTIEL 130
DG WFMDVF V DQ+GNK+ + V + IQ+ + A F LR SVGV E+T+IEL
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIEL 123
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
G DRPGLLSEV AVL+DL CNV+ AE+WTHN+R A+V+++T +T I DP L+ IK
Sbjct: 124 AGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTIK 183
Query: 191 RLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVT 250
LL V++ + R+A T S TH+ERRLHQ+M+ DRDY+ SAS S L+
Sbjct: 184 ELLCNVVRTNSGSRAAKTVFSCSDTHRERRLHQIMFDDRDYEGVKRARTSASRPSVTLMN 243
Query: 251 VESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDG 310
+E K YTVV +R DRPKL+FD VCTLTDMQYVV+H V E EAYQE+YIRHVDG
Sbjct: 244 IE----KDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDG 299
Query: 311 NPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
PI+SEAE++RVI CLEAAI+RR SEG+ LEL EDR GLLSD+TR FREN L++ RAE+
Sbjct: 300 LPINSEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRAEI 359
Query: 371 TTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLT 406
+TR +A + FYV D +GNPV+S+ +ES+R++IG++
Sbjct: 360 STREGKAKDTFYVTDVTGNPVESKIVESIRQQIGVS 395
>gi|356563282|ref|XP_003549893.1| PREDICTED: uncharacterized protein LOC100794729 [Glycine max]
Length = 441
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/452 (53%), Positives = 312/452 (69%), Gaps = 25/452 (5%)
Query: 9 AVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAY 68
A DE+EKLV+RM+ PRV +DN AT++KVDSA K G L++ VQVL+DL+L I++AY
Sbjct: 5 ACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAY 64
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTI 128
ISSDG WFMDVFHVTDQNGNKL+++ V I+QSLG S S G+ T +
Sbjct: 65 ISSDGRWFMDVFHVTDQNGNKLTDESVLSYIEQSLGSIHNGKTS--HSNGL------TIL 116
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
ELTG DR GLLSEVFAVL++ +C+V+ A+VWTHN R+AS++Y+ + PI+D ++
Sbjct: 117 ELTGTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSETPIEDSQRIST 176
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
I+ L VLKGD D R+A T+V+ H ERRLHQMMY DRDY N S+ P+
Sbjct: 177 IEARLRNVLKGDNDIRNAKTSVTNAVLHAERRLHQMMYTDRDYQRNPIFKFSSD---TPI 233
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
VTV++ ++GY+VVN++C DR KLLFD VC LT+M+YVV+HAT+ +AY E+YIRH
Sbjct: 234 VTVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTEMEYVVFHATIKTTIDQAYLEFYIRHK 293
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG PISSE ER RVI CL+AA++RR EG+ LELC EDR GLL++V R FRENGL+VTRA
Sbjct: 294 DGTPISSEPERHRVIQCLQAAVERRAFEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRA 353
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK-------DDAYSKSPPQ 421
E++T G A NVFYV DA G P + +ESVR+++GL+ L+VK + A + P
Sbjct: 354 EISTIGDMASNVFYVTDAIGYPADPKIVESVRQKVGLSNLKVKELPLVCHEKAEREDQPV 413
Query: 422 ESG---RFSLGNLFRSRSEKFLYNLGLIKSCS 450
G LG+L R + LYNLGLIKSCS
Sbjct: 414 GVGGAVLLCLGSLVR----RNLYNLGLIKSCS 441
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/437 (52%), Positives = 307/437 (70%), Gaps = 8/437 (1%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L R+NPP V++DNTS ++ TL+KVDS NK G LLE+VQVL DLDL I +AYISSD
Sbjct: 12 EYENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ GNK+++ + I++ LGP+ + S + VGV + +HT+I
Sbjct: 72 GGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
E+ RDRPGLLSEV A+L+DL NV+ AE WTHN R+A V+Y+ AT +DDP+ L+
Sbjct: 132 EIIARDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSA 191
Query: 189 IKRLLLYVLKG--DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
++ L VL+G D++ A T++S+ STH +RRLHQM +AD+DY+ AS +
Sbjct: 192 MEEQLNNVLRGCEQEDEKFARTSLSIGSTHVDRRLHQMFFADKDYEAVTKLDDFASRGLE 251
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P +TVE C +KGY+V+N+ C DRPKL+FD VCTLTDMQY+V+HAT+ + A QEY+IR
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H DG + + E++RV+ CLEAAI RR SEG SLELC +DR GLLS+VTRI RE+GLSV+
Sbjct: 312 HKDGCTLDT-GEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRILREHGLSVS 370
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRF 426
RA VTT G QAVNVFYV DASGNPV +TIE++R EIG +++ + +E G+
Sbjct: 371 RAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSRKGKEEGQA 430
Query: 427 SLGNLFRSRSEKFLYNL 443
G + +++ F NL
Sbjct: 431 GTGGGW-AKTTFFFGNL 446
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 13/174 (7%)
Query: 8 FAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA 67
+ V + + R P++TV++ + ++I V ++ + ++V L D+ I+ A
Sbjct: 236 YEAVTKLDDFASRGLEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHA 295
Query: 68 YISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT 127
ISS G + + ++G L G + R + L ++ + + E +
Sbjct: 296 TISSSGSHASQEYFIRHKDGCTL-----------DTGEKERVVKCLEAAIHRRVS-EGWS 343
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+EL +DR GLLSEV +L + +V A V T + +V Y+ +A+G P+D
Sbjct: 344 LELCAKDRVGLLSEVTRILREHGLSVSRAGVTTVGEQAVNVFYV-KDASGNPVD 396
>gi|356514172|ref|XP_003525780.1| PREDICTED: uncharacterized protein LOC100802262 [Glycine max]
Length = 441
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/452 (52%), Positives = 313/452 (69%), Gaps = 25/452 (5%)
Query: 9 AVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAY 68
A DE+EKLV+RM+ PRV +DN AT++KVDSA K G L++ VQVL+DL+L I++AY
Sbjct: 5 ACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAY 64
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTI 128
ISSDG WFMDVFHVTD+NG+KL++ V I+QSLG + S G+ T +
Sbjct: 65 ISSDGRWFMDVFHVTDENGDKLTDKSVLSYIEQSLGSIHNA--KTNHSNGL------TIL 116
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
ELTG DR GLLSEVFAVL++ +C+V+ A+VWTHN R+AS++Y+ +G I+D ++
Sbjct: 117 ELTGTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSGTLIEDSQRIST 176
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
I+ L VLKGD D R+A T+V+ H ERRLHQMMY DRDY N ++ P+
Sbjct: 177 IEARLRNVLKGDNDIRNAKTSVTNAVLHAERRLHQMMYTDRDYQRNPILKFASV---TPI 233
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
VTV++ ++GY+VVN++C DR KLLFD VC LTDM+YVV+HAT+ +AY E+YIRH
Sbjct: 234 VTVQNWAERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIRHR 293
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG PISSE ER RVI CL+AA++RR EG+ LELC EDR GLL++V R FRENG++VTRA
Sbjct: 294 DGTPISSEPERHRVIQCLQAAVERRAYEGVRLELCTEDRQGLLAEVMRTFRENGMNVTRA 353
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK-------DDAYSKSPPQ 421
E++T G+ A NVFYV DA G PV + +ESVR+++GL+ L+VK + A + P
Sbjct: 354 EISTIGNMASNVFYVTDAVGYPVDPKIVESVRQKVGLSNLKVKELPLVCHEKAEREDQPV 413
Query: 422 ESG---RFSLGNLFRSRSEKFLYNLGLIKSCS 450
G LG+L R K LYNLGLIKSCS
Sbjct: 414 GVGGAVLLCLGSLVR----KNLYNLGLIKSCS 441
>gi|357121213|ref|XP_003562315.1| PREDICTED: uncharacterized protein LOC100840593 [Brachypodium
distachyon]
Length = 453
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/443 (52%), Positives = 309/443 (69%), Gaps = 14/443 (3%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE++ + +MNPP + VDN S AT+++VDSAN+ G LLE++QVL DL+L+I +AYI+S
Sbjct: 15 DEYDNFIRKMNPPSIVVDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 72 DGEWFMDVFHVTDQNGNKLSED----DVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT 127
DG WFMDVF++TD+ G KL + + + I++SLG +R + RRSV V A+ H
Sbjct: 75 DGGWFMDVFNITDKEGKKLKDKATLAQIEDYIRKSLGADSRYLPARRRSVDVAASANHNV 134
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELTG DRPGLLSEV AVL++LKCNV+ AE+WTHN+R A+V+ +T + TGL + D + L
Sbjct: 135 IELTGTDRPGLLSEVSAVLANLKCNVVSAEIWTHNTRAAAVMQVTDQDTGLAVTDTERLE 194
Query: 188 KIKRLLLYVLKGDRDKRSANTAVS--VDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
+IK L Y+L+G R A AVS +TH ERRLHQMM D D + + + S R
Sbjct: 195 RIKERLSYLLRGGNLSRGAAMAVSSGTSTTHTERRLHQMMLDDGDCEQLQRHASNQSQR- 253
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P VTV + DK Y+VV +RC DRPKLLFD VCTLTD+ YVV+HA + A +AYQE+Y+
Sbjct: 254 -PNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDANDNQAYQEFYV 312
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RHV+G+P+++EAER RV+ CLEAAI+RR EG+ LELC D+ GLLS+VTRIFREN L+V
Sbjct: 313 RHVNGSPMNTEAERLRVVQCLEAAIERRVWEGMKLELCTNDKVGLLSEVTRIFRENSLTV 372
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESG- 424
TRAEV+TRG AVN FYV ++G V +TI+S+R+EIG I +VK P ++
Sbjct: 373 TRAEVSTRGRTAVNTFYVCGSAGEAVDQKTIDSIRQEIGHNI-QVKGQPEPSEPQKKESP 431
Query: 425 -RFSLGNLFRSRSEKFLYNLGLI 446
F NLFR RS LY+LG+
Sbjct: 432 TWFLFANLFRPRS---LYSLGMF 451
>gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa Japonica Group]
gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group]
gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group]
Length = 453
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/443 (53%), Positives = 308/443 (69%), Gaps = 14/443 (3%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE++ + +MNPPR+ +DN S AT+++VDSAN+ G LLE++QVL DL+L+I +AYI+S
Sbjct: 15 DEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQ----QSLGPRARSFRSLRRSVGVQAALEHTT 127
DG W MDVF++TD+ G KL + RI+ +SLG +R S RRSV V A+ +H
Sbjct: 75 DGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHNV 134
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELTG DRPGLLSEV AVL+ LKCNV+ AE+WTHN+R A+V+ +T E TG + D D L
Sbjct: 135 IELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRLE 194
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVD--STHKERRLHQMMYADRDYDMNYAESGSASGRS 245
+I+ L Y+L+G R A AVS STH ERRLHQMM D D++ + + S R
Sbjct: 195 RIRDRLSYLLRGGNLSRGAAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHRHPPNQSQR- 253
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P VTV + DK Y+VV +RC DRPKLLFD VCTLTD+ YVV+HA + A+ +AYQE+Y+
Sbjct: 254 -PNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYV 312
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RHV+G+P+ +EA+R RVI CLEAAI+RR SEG+ LELC D+ GLLS+VTRIFREN L+V
Sbjct: 313 RHVNGSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTV 372
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESG- 424
TRAEV+TRG AVN FYV D++G V +TI+S+R+ IG I +VK P ++
Sbjct: 373 TRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIGQNI-QVKGQPEPSEPQKKESP 431
Query: 425 -RFSLGNLFRSRSEKFLYNLGLI 446
F NLFR RS LY+ G+
Sbjct: 432 TWFLFANLFRPRS---LYSFGMF 451
>gi|357481871|ref|XP_003611221.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
gi|355512556|gb|AES94179.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
Length = 441
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/448 (52%), Positives = 312/448 (69%), Gaps = 17/448 (3%)
Query: 9 AVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAY 68
A DE+EKL++RM+ PRV +DN ATL+KV SA + GSLL +QVL DL+L+I++AY
Sbjct: 5 ACTDEYEKLLIRMSTPRVVIDNAVCSTATLVKVISARRNGSLLNAIQVLIDLNLLIKKAY 64
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTI 128
ISSDG+WFMDVFHVT QNG+K+ ++++ + I+QSLG +V + T +
Sbjct: 65 ISSDGKWFMDVFHVTHQNGSKIIDENILKYIEQSLGST--------HNVRTNCSNGLTVL 116
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL+G DR GLLSEVFAVL+DL+C+V+ A+VWTHN R+AS++Y+ +G I+D + K
Sbjct: 117 ELSGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKK 176
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
I+ L VLKGD D RSA T+VS+ H ERRLHQMM+ADRDY+ ++ L
Sbjct: 177 IEVRLRNVLKGDNDIRSAKTSVSMSVMHSERRLHQMMFADRDYERTPILKLTSDN---TL 233
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
VTV++ ++GY+VVN++C DR KLLFD VC LTDM+YVV+HAT+ S +AY E+YIRH
Sbjct: 234 VTVQNWAERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHK 293
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG PISSE ERQRVI CL+A+++RR SEG+ L+LC ED+ GLL++V R FRENGL+VTRA
Sbjct: 294 DGTPISSEPERQRVIQCLKASVERRASEGVQLKLCTEDKQGLLAEVMRTFRENGLNVTRA 353
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA--YSKSPPQESGRF 426
E++T + A NVFYV D +G P TIESVR++IG + L VK+ Y + +E
Sbjct: 354 EISTLENMATNVFYVTDVTGKPADPTTIESVRQKIGSSNLEVKELPLIYHQKTEREDQTV 413
Query: 427 SLGN----LFRSRSEKFLYNLGLIKSCS 450
+G S + LY+LGLIKSCS
Sbjct: 414 GIGGAVLWFIGSLVRRNLYSLGLIKSCS 441
>gi|218193266|gb|EEC75693.1| hypothetical protein OsI_12504 [Oryza sativa Indica Group]
Length = 453
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/443 (52%), Positives = 307/443 (69%), Gaps = 14/443 (3%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE++ + +MNPPR+ +DN S AT+++VDSAN+ G LLE++QVL DL+L+I +AYI+S
Sbjct: 15 DEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQ----QSLGPRARSFRSLRRSVGVQAALEHTT 127
DG W MDVF++TD+ G KL + RI+ +SLG +R S RRSV V A+ +H
Sbjct: 75 DGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHNV 134
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELTG DRPGLLSEV AVL+ LKCNV+ AE+WTHN+R A+V+ +T E TG + D D L
Sbjct: 135 IELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRLE 194
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVD--STHKERRLHQMMYADRDYDMNYAESGSASGRS 245
+I+ L Y+L+G R AVS STH ERRLHQMM D D++ + + S R
Sbjct: 195 RIRDRLSYLLRGGNLSRGTAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHRHPPNQSQR- 253
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P VTV + DK Y+VV +RC DRPKLLFD VCTLTD+ YVV+HA + A+ +AYQE+Y+
Sbjct: 254 -PNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYV 312
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RHV+G+P+ +EA+R RVI CLEAAI+RR SEG+ LELC D+ GLLS+VTRIFREN L+V
Sbjct: 313 RHVNGSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTV 372
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESG- 424
TRAEV+TRG AVN FYV D++G V +TI+S+R+ IG I +VK P ++
Sbjct: 373 TRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIGQNI-QVKGQPEPSEPQKKESP 431
Query: 425 -RFSLGNLFRSRSEKFLYNLGLI 446
F NLFR RS LY+ G+
Sbjct: 432 TWFLFANLFRPRS---LYSFGMF 451
>gi|449490057|ref|XP_004158495.1| PREDICTED: uncharacterized protein LOC101225681 [Cucumis sativus]
Length = 440
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/443 (52%), Positives = 314/443 (70%), Gaps = 9/443 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E++KL+ R+NPPRV +DN + + AT+I+VDS NK G LL++VQVL D++LII +AYISS
Sbjct: 3 NEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+V GNK+ + +V IQ L A SLR SVGV + +HT+IEL+
Sbjct: 63 DGGWFMDVFNVITYEGNKIRDQEVINAIQMRL--EASFVPSLRESVGVMPSEDHTSIELS 120
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+DL CNV+ A+VWTHN+R A+VV++T +ATG I+DP L IK
Sbjct: 121 GTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKE 180
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSASGRS-KPLV 249
LL VL+G+ + + A +S T +RRLHQ+M ADRDY+ ++ +P V
Sbjct: 181 LLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRPHV 240
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
TV CT+K YT++ R DRPKLLFD +CTLTDM+YVV+H V EA+ E+YIRH D
Sbjct: 241 TVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFLEFYIRHKD 300
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G PISS+AER RV++CLEAAI+RR SEG+ LELC EDR GLLSD+TRIFREN L + RAE
Sbjct: 301 GLPISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENSLCIRRAE 360
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQE-SGRFS 427
+ T+ +A ++FYV D +G + ++ +ES+RK+IG +L+VK ++ S++PP+E + F
Sbjct: 361 IATKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCLSETPPKEMTAGFF 420
Query: 428 LGNLFRSRSEKFLYNLGLIKSCS 450
LG F++R+ N LI+S S
Sbjct: 421 LGYFFKART---FQNFKLIRSYS 440
>gi|449441712|ref|XP_004138626.1| PREDICTED: uncharacterized protein LOC101213097 [Cucumis sativus]
Length = 445
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/448 (51%), Positives = 315/448 (70%), Gaps = 14/448 (3%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E++KL+ R+NPPRV +DN + + AT+I+VDS NK G LL++VQVL D++LII +AYISS
Sbjct: 3 NEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYISS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+V GNK+ + +V IQ L A SLR SVGV + +HT+IEL+
Sbjct: 63 DGGWFMDVFNVITYEGNKIRDQEVINAIQMRL--EASFVPSLRESVGVMPSEDHTSIELS 120
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+DL CNV+ A+VWTHN+R A+VV++T +ATG I+DP L IK
Sbjct: 121 GTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKE 180
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSASGRS-KPLV 249
LL VL+G+ + + A +S T +RRLHQ+M ADRDY+ ++ +P V
Sbjct: 181 LLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRPHV 240
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-----AYQEYY 304
TV CT+K YT++ R DRPKLLFD +CTLTDM+YVV+H V E ++QE+Y
Sbjct: 241 TVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEENWSFSFQEFY 300
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLS 364
IRH DG PISS+AER RV++CLEAAI+RR SEG+ LELC EDR GLLSD+TRIFREN L
Sbjct: 301 IRHKDGLPISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENSLC 360
Query: 365 VTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQE- 422
+ RAE+ T+ +A ++FYV D +G + ++ +ES+RK+IG +L+VK ++ S++PP+E
Sbjct: 361 IRRAEIATKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCLSETPPKEM 420
Query: 423 SGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+ F LG F++R+ N LI+S S
Sbjct: 421 TAGFFLGYFFKART---FQNFKLIRSYS 445
>gi|326500948|dbj|BAJ95140.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/445 (52%), Positives = 316/445 (71%), Gaps = 20/445 (4%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV MNPPRV +DN ++ AT+I+VDS N G+LL +VQV+ DL+L+IR+AY SS
Sbjct: 8 DEYAKLVRGMNPPRVVIDNDASDDATVIRVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 67
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTD++GNK+ + IQ++L + +R +VG+ + ++T+IELT
Sbjct: 68 DGSWFMDVFNVTDRDGNKVLDTPTISYIQKTLEAEDCYYPEVRNTVGIVPSEDYTSIELT 127
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT--SEATGLPIDDPDTLAKI 189
G DRPGLLSEV AVL+ ++C V AE+WTHN+R+A+VV +T ++A G I+D +A I
Sbjct: 128 GTDRPGLLSEVCAVLAGMQCAVRSAELWTHNTRVAAVVQVTDAAKAAGGAIEDDARIADI 187
Query: 190 KRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLV 249
R L +L+G R+A A THKERRLHQMM+ DRD Y +G R++ V
Sbjct: 188 SRRLDNLLRGQNGVRAAAAA---SLTHKERRLHQMMFEDRD----YGAAGPPDPRTE--V 238
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEYYIRHV 308
+V C ++GYTVV +RC DRPKLLFD VCT+TDMQYVV+H TV +E + AYQEYYIRHV
Sbjct: 239 SVTHCAERGYTVVVVRCRDRPKLLFDTVCTITDMQYVVHHGTVSSEPAGGAYQEYYIRHV 298
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG+P+S+EAER+RV+ CLEAA++RRT++G+ LE+ +DRAGLLSDVTRIFRENGL++ RA
Sbjct: 299 DGHPVSTEAERRRVVQCLEAAVERRTADGLELEVRTDDRAGLLSDVTRIFRENGLTIRRA 358
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK-----DDAYSKSP-PQE 422
E+++ +AV+ FY+ D G+PV+++TIE++R +IG LRVK DD S S
Sbjct: 359 EISSEDGEAVDTFYLSDPQGHPVEAKTIEAIRAQIGEATLRVKNNPLADDGGSTSEVAAG 418
Query: 423 SGRFSLGNLFRSRSEKFLYNLGLIK 447
S F GNLF+ + N GLIK
Sbjct: 419 STAFLFGNLFKFY--RPFQNFGLIK 441
>gi|6091737|gb|AAF03449.1|AC010797_25 unknown protein [Arabidopsis thaliana]
Length = 462
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/425 (53%), Positives = 292/425 (68%), Gaps = 34/425 (8%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KL+ RMNPPRV +DN ++ AT+I+VDS NK G+LLE+VQVL D++L+I++AYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQ-----------------------------QS 102
DG WFMDVF V DQ+GNK+ + V + IQ Q
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQR 123
Query: 103 LGPRARSF-RSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTH 161
+ A F LR SVGV E+T+IEL G DRPGLLSEV AVL+DL CNV+ AE+WTH
Sbjct: 124 IESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTH 183
Query: 162 NSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRL 221
N+R A+V+++T +T I DP L+ IK LL V++ + R+A T S TH+ERRL
Sbjct: 184 NTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCNVVRTNSGSRAAKTVFSCSDTHRERRL 243
Query: 222 HQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLT 281
HQ+M+ DRDY+ SAS S L+ +E K YTVV +R DRPKL+FD VCTLT
Sbjct: 244 HQIMFDDRDYEGVKRARTSASRPSVTLMNIE----KDYTVVTMRSKDRPKLVFDVVCTLT 299
Query: 282 DMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLE 341
DMQYVV+H V E EAYQE+YIRHVDG PI+SEAE++RVI CLEAAI+RR SEG+ LE
Sbjct: 300 DMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQERVIQCLEAAIERRASEGLELE 359
Query: 342 LCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRK 401
L EDR GLLSD+TR FREN L++ RAE++TR +A + FYV D +GNPV+S+ +ES+R+
Sbjct: 360 LSAEDRVGLLSDITRTFRENSLTIVRAEISTREGKAKDTFYVTDVTGNPVESKIVESIRQ 419
Query: 402 EIGLT 406
+IG++
Sbjct: 420 QIGVS 424
>gi|414871684|tpg|DAA50241.1| TPA: hypothetical protein ZEAMMB73_737306 [Zea mays]
Length = 442
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/441 (51%), Positives = 308/441 (69%), Gaps = 16/441 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F +L+ R R+ +DN S+ +AT+++VDSAN+ G LLE++QV+ DL+L+I +AYI+SD
Sbjct: 12 QFWRLIGR----RIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYITSD 67
Query: 73 GEWFMDVFHVTDQNGNKLSED----DVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTI 128
G WFMDVF+VTD+ G K+ ++ + + I++SLG +R S RRSV V AA +H I
Sbjct: 68 GGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNII 127
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
ELTG DRPGLLSEV AVL+ LKCNV+ AE+WTHN+R A+V+ +T E TGL + D + L +
Sbjct: 128 ELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLER 187
Query: 189 IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
I+ L Y+ +G R A + +TH ERRLHQMM D DY+ ++ S R P
Sbjct: 188 IREKLSYLFRGGNLSRGATVSSRTATTHTERRLHQMMLDDGDYEQLQRQAPGQSQR--PN 245
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
VTV + DK Y+VV +RC DR KLLFD VCTLTD+QYVV+HA + A+ +AYQE+Y+RHV
Sbjct: 246 VTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRHV 305
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
+G+P+++E ER RVI CLEAAI+RR SEG+ LELC D+ GLLS+VTRIFREN L+VTRA
Sbjct: 306 NGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRA 365
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESG--RF 426
EVTTRG AVN FYV ++G V + I+S+R+ IG + L+VK A P ++ F
Sbjct: 366 EVTTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVKGQAEPPEPQKKESPTWF 424
Query: 427 SLGNLFRSRSEKFLYNLGLIK 447
NLFR RS LY+ G ++
Sbjct: 425 LFANLFRPRS---LYSFGFMR 442
>gi|356546978|ref|XP_003541896.1| PREDICTED: uncharacterized protein LOC100797658 [Glycine max]
Length = 449
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/442 (51%), Positives = 311/442 (70%), Gaps = 19/442 (4%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E R+NPPRV+VDN S TLIK DS NK G LLE+VQ+L DLD II +AYISSD
Sbjct: 12 EYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ G K+++ + I+++LGP+ +S ++ + VGV + +HT I
Sbjct: 72 GGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDHTVI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL GRDRPGLLSE+ AVL+ L+ NV+ AEVWTHN R+A V+Y+ ++AT +DD L+
Sbjct: 132 ELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYV-NDATNQAMDDSKRLSI 190
Query: 189 IKRLLLYVLKG-DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS-- 245
I+ L ++L+G + D++ A T+ S+ TH +RRLHQM++ADRDY+ +
Sbjct: 191 IEEQLNHILRGCEDDEKVARTSFSMGITHMDRRLHQMLFADRDYESAGVTTTDVDCPPCF 250
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P + +E +KGY+VV+++C DR KL+FD VCTLTDM+YVV+HAT+ +E A QEY+I
Sbjct: 251 RPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFI 310
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RH+DG + +E E++R I C+EAAI+RR SEG+SLELC +DR GLLS+VTRI RENGL+V
Sbjct: 311 RHMDGCTLDTEGEKERAIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTV 370
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL-RVK--DDAYSKSPPQE 422
+RA V+T G + +NVFYV DASGNPV + IE++ KEIG T++ VK AY+K+P +
Sbjct: 371 SRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQTVMVNVKRIPAAYAKAPVET 430
Query: 423 SG----RFSLGNLFRSRSEKFL 440
G F GNL E+FL
Sbjct: 431 RGWARTSFFFGNLL----ERFL 448
>gi|224119390|ref|XP_002318060.1| predicted protein [Populus trichocarpa]
gi|222858733|gb|EEE96280.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/441 (52%), Positives = 310/441 (70%), Gaps = 14/441 (3%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDG 73
+ KLV RMN PRV ++N + AT+I++D+ ++G+LLE+VQVL DL+L+I +AY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDACEHATVIQLDTVYRQGTLLEVVQVLTDLNLVITKAYMSSDG 70
Query: 74 EWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGR 133
WFM+VFHVTD +GNK+ ++ + I+++L A +S+ + + + EHT IELTG
Sbjct: 71 GWFMNVFHVTDDDGNKIRDEGILNCIKKALETDAYMVKSMGKML---LSKEHTLIELTGT 127
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
DRPGLLSEV AVL+DL CNV+ AEVW HN+R A+V++IT ++TG I+DP L+ IK LL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKELL 187
Query: 194 LYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVE 252
VLKG D R+ ++S H RRLHQMM+A RD++ + R +P VTV
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPVSVDDI---RVRPYVTVS 244
Query: 253 SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP 312
C D+ YTVV R DRPKLLFD VCTLTDMQY+V+H TVI +S EAYQEYYIRH DG P
Sbjct: 245 DCPDRNYTVVTARSVDRPKLLFDTVCTLTDMQYLVFHGTVITDSDEAYQEYYIRHADGLP 304
Query: 313 ISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTT 372
+SSEAERQRV+ C++AAI+RR SEG+ LEL +D GLLSD+TRI RENGL RA+++T
Sbjct: 305 MSSEAERQRVMECIQAAIERRVSEGLQLELFTDDHFGLLSDITRILRENGLCPKRAKIST 364
Query: 373 RGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP--PQESGR-FSLG 429
+ +A + F V D SGNPV+ +TI +R+++G T+++VK + S SP PQE+ R F G
Sbjct: 365 KNGKARHNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVKGN-LSMSPKFPQETPRSFLFG 423
Query: 430 NLFRSRSEKFLYNLGLIKSCS 450
+ F+ S N LIKS S
Sbjct: 424 SFFKCPS---FQNSRLIKSLS 441
>gi|449459664|ref|XP_004147566.1| PREDICTED: uncharacterized protein LOC101209959 [Cucumis sativus]
gi|449520363|ref|XP_004167203.1| PREDICTED: uncharacterized LOC101209959 [Cucumis sativus]
Length = 448
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/462 (50%), Positives = 309/462 (66%), Gaps = 38/462 (8%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
W S DE+ KL+ RMN PRV +DN ATL+KVDSA + G LLE VQVL DL+L
Sbjct: 10 WPGSL---DEYSKLINRMNTPRVVIDNAVCETATLVKVDSARRHGILLEAVQVLTDLNLS 66
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-----GPRARSFRSLRRSVG 118
I++AYISSDG WFMDVFHVTD GNKL+++ V ++QSL G A S
Sbjct: 67 IQKAYISSDGIWFMDVFHVTDLEGNKLTDEGVISYLEQSLATIHCGKPATSN-------- 118
Query: 119 VQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
+ T +ELTG DR GLLSEVFAVL++L+C+V+ A+VWTHN R+AS++Y+ +G
Sbjct: 119 -----DLTALELTGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGS 173
Query: 179 PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAES 238
PI + + + I L VLKGD D A T+VS+ TH ERRLHQMM+ADRDY+ +
Sbjct: 174 PIKESERIDTIVGRLRNVLKGDDDILYAKTSVSMTVTHTERRLHQMMFADRDYERKPVQQ 233
Query: 239 GSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
+ P+VTV++ ++GY+VVN++C DR KLLFD +CT+TDM YVV+H T+
Sbjct: 234 HT---EDSPVVTVQNLVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHR 290
Query: 299 AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIF 358
AY E+YIRH DG PISSEAERQRVI CL+A+I+RRTS G+ LELC DR LL+DVTR F
Sbjct: 291 AYLEFYIRHTDGTPISSEAERQRVIQCLQASIERRTSRGVRLELCTTDRPCLLADVTRTF 350
Query: 359 RENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD---DAY 415
RENGL+VTRAEV+T A+N+FYV D G+ ++ I+SVR++IG++ L+VK+ +
Sbjct: 351 RENGLNVTRAEVSTSQEVALNLFYVTDGHGSAADTKMIDSVREKIGMSNLKVKELPLVSQ 410
Query: 416 SKSPPQESGR-------FSLGNLFRSRSEKFLYNLGLIKSCS 450
K+ +E SLG++ R + LYNLGLI+S S
Sbjct: 411 QKTEGEEQAASVGGAVLLSLGSILR----RNLYNLGLIRSYS 448
>gi|356552731|ref|XP_003544716.1| PREDICTED: uncharacterized protein LOC100789044 [Glycine max]
Length = 448
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/437 (51%), Positives = 306/437 (70%), Gaps = 10/437 (2%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E R+NPPRV+VDN S TLIK DS NK G LLE+VQ+L DLD II +AYISSD
Sbjct: 12 EYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTI 128
G WFMDVFHVTDQ G K+++ + I+++LGP+ +S + + VGV + +HT I
Sbjct: 72 GGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVNCWQGKRVGVHSIGDHTAI 131
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL GRDRPGLLSE+ AVL+ L+ NV+ AEVWTHN R+A V+Y+ ++AT +DD L+
Sbjct: 132 ELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYV-NDATNQAMDDSKRLSI 190
Query: 189 IKRLLLYVLKG-DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS-- 245
++ L ++L+G + D++ A T+ ++ TH +RRLHQM++ADRDY+ +
Sbjct: 191 MEEQLNHILRGCEDDEKVARTSFTMGFTHMDRRLHQMLFADRDYESVGLTTTDVDCPPSF 250
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P + +E +KGY+VV++RC DR KL+FD VCTLTDM+YVV+HAT+ +E A QEY+I
Sbjct: 251 RPKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFI 310
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RH+DG + +E E++RVI C+EAAI+RR SEG+SLELC +DR GLLS+VTRI RENGL V
Sbjct: 311 RHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLRV 370
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIG-LTILRVKD-DAYSKSPPQES 423
+RA V+T G + +NVFYV DASGNPV + IE++ KEIG + ++ VK Y K+P +
Sbjct: 371 SRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQIMMVNVKRVPGYVKAPAETR 430
Query: 424 GRFSLGNLFRSRSEKFL 440
G F + E+FL
Sbjct: 431 GWAKTSFFFGNLLERFL 447
>gi|195970384|gb|ACG60673.1| hypothetical protein BoB028L01.070 [Brassica oleracea var.
alboglabra]
Length = 425
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/449 (51%), Positives = 298/449 (66%), Gaps = 47/449 (10%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL+ RMNPPRV +DN S ++AT+I+VDSAN+ G LLE+VQ+L DLDL I +AYISS
Sbjct: 14 DEYEKLIRRMNPPRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKAYISS 73
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VT Q+GNK++++ V + IQ+SLGP A F + RSVGV + + T IELT
Sbjct: 74 DGGWFMDVFNVTHQDGNKVTDEVVLDYIQKSLGPEA-CFSTSLRSVGVIPSTDSTVIELT 132
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSE+ AVL+ LKC+V+ AEVWTHN+R A+V+ +T + TG + DP+ L+ IK
Sbjct: 133 GCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLIKS 192
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG----RSKP 247
LL VLKG + A T VS H +RRLHQMM+ DRDY+ +S R +P
Sbjct: 193 LLRNVLKGSNTPKEAKTVVSQGEVHTDRRLHQMMFEDRDYENGVMVDDDSSNVQDERQRP 252
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
V V++ DK Y+VV +RC DRPKLLFD VCTLTDMQYVV+H +V E EA+QEY
Sbjct: 253 DVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEY---- 308
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
G+ LELC DR GLLS+VTRIFREN L+VTR
Sbjct: 309 -----------------------------GLKLELCTTDRVGLLSNVTRIFRENSLTVTR 339
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD-----DAYSKSPPQE 422
AEV T+G +AVN FYV DASG + ++TI+S+R+ IG T+L+VK+ K P QE
Sbjct: 340 AEVKTKGGKAVNTFYVSDASGYSIDAKTIDSIRQTIGKTLLKVKNKPKDQQQREKPPSQE 399
Query: 423 S-GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
S RF G LF+S+S N GL++S S
Sbjct: 400 SPTRFLFGGLFKSKS---FVNFGLVRSYS 425
>gi|224119726|ref|XP_002318147.1| predicted protein [Populus trichocarpa]
gi|222858820|gb|EEE96367.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/430 (50%), Positives = 301/430 (70%), Gaps = 10/430 (2%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDG 73
+ KLV RMN PRV ++N AT+I+VD+ ++G+LLE+VQ L DL+L+I +AY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDVCEHATVIQVDTVYRQGTLLEVVQALADLNLVITKAYMSSDG 70
Query: 74 EWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGR 133
WFM+VFHVTD GNK+ ++ + I+++L A +S+ + + + EHT +ELTG
Sbjct: 71 GWFMNVFHVTDDGGNKIRDEGILNCIEKALETDAYMVKSMGKML---LSKEHTLVELTGT 127
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
DRPGLLSEV AVL+DL CNV+ AE+W HN+R A+V+++T ++TG I+DP L+ IK LL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEIWAHNARAAAVIHVTDQSTGTAIEDPRQLSLIKELL 187
Query: 194 LYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVE 252
VLKG D R+ ++S H RRLHQMM+A RD++ +E ++ +P VTV
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPLSEDDNSV---RPSVTVS 244
Query: 253 SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP 312
C D+ YTVV DRPKLLFD VCTLTDMQY+V+H TV S EAYQEYYIRHVDG P
Sbjct: 245 DCPDRDYTVVTATSIDRPKLLFDTVCTLTDMQYLVFHGTVNTSSDEAYQEYYIRHVDGLP 304
Query: 313 ISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTT 372
+SSEAERQRV+ C++AAI+RR +EG+ LEL +D GL+SD+TRI RENGL RAE++T
Sbjct: 305 VSSEAERQRVMECIQAAIERRATEGLHLELFTDDHFGLISDITRILRENGLCPKRAEIST 364
Query: 373 RGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDD--AYSKSPPQESGRFSLGN 430
+ +A + F V D SGNPV+ +TI +R+++G T+++VK + S+ P E+ +F L
Sbjct: 365 KNGKAKHNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVKGNFKYVSEISPAETKKFPLWE 424
Query: 431 LFR-SRSEKF 439
LF+ R KF
Sbjct: 425 LFQMPRFPKF 434
>gi|15221327|ref|NP_172704.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
gi|8778647|gb|AAF79655.1|AC025416_29 F5O11.14 [Arabidopsis thaliana]
gi|22138106|gb|AAM93433.1| ACR8 [Arabidopsis thaliana]
gi|110737291|dbj|BAF00592.1| hypothetical protein [Arabidopsis thaliana]
gi|111074504|gb|ABH04625.1| At1g12420 [Arabidopsis thaliana]
gi|332190757|gb|AEE28878.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
Length = 441
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/452 (52%), Positives = 304/452 (67%), Gaps = 29/452 (6%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN AT++KVDS+ + G LLE VQ+L DL+L I++AYIS
Sbjct: 7 LDEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYIS 66
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIEL 130
SDG W MDVFHVTD NGNKL++ V I+QS+ ++ V T +EL
Sbjct: 67 SDGTWNMDVFHVTDLNGNKLNDQSVLRYIEQSIETVYYG-----ENIEVNGL---TALEL 118
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
TG DR GLLSE+FAVLSDL C+V+ A++WTHN R+ASV+Y+ +G PI D ++KI+
Sbjct: 119 TGTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLKDCISGAPILDSHRISKIE 178
Query: 191 RLLLYVLKGDRDKRSA-NTAVSVDST-HKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
L VL GD D SA T V+VDS H ERRLHQ+M+ DRDY E S P+
Sbjct: 179 GRLKNVLNGDNDVNSAAKTCVTVDSMMHIERRLHQLMFEDRDY-----ERRSKKHERSPM 233
Query: 249 V--TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
V TV++ ++GY+VVN+ C DR KLLFD VCTLTDM+Y V+HAT+ +A+ E+YIR
Sbjct: 234 VVVTVQNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIR 293
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H DG+PISSEAERQRVI CLEAA++RR EG+ LEL D+ GLL++VTR FRENGL+VT
Sbjct: 294 HKDGSPISSEAERQRVIQCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVT 353
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD--DAYSKSPPQESG 424
R E++T A N+FYV DA+G+ + IESVR++IGL LRVK+ Y K E
Sbjct: 354 RTEISTSSDMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMYHKKGDGEEQ 413
Query: 425 R------FSLGNLFRSRSEKFLYNLGLIKSCS 450
+ SLG+L + L+N GLIKSCS
Sbjct: 414 QQTKAVLVSLGSLVW----RNLFNFGLIKSCS 441
>gi|297849610|ref|XP_002892686.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
gi|297338528|gb|EFH68945.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
Length = 440
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/451 (52%), Positives = 306/451 (67%), Gaps = 28/451 (6%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN AT++KVDS+ + G LLE VQ+L DL+L I++AYIS
Sbjct: 7 LDEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYIS 66
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIEL 130
SDG W MDVFHVTD NGNKL++ V I+QS+ ++ V T +EL
Sbjct: 67 SDGRWNMDVFHVTDLNGNKLNDQSVLRYIEQSIETVYYG-----ENIEVNGL---TALEL 118
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
TG DR GLLSE+FAVLSDL C+V+ A++WTHN R+ASV+Y+ ++G PI D ++KI+
Sbjct: 119 TGTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLRDGSSGAPILDSQRISKIE 178
Query: 191 RLLLYVLKGDRDKRSA-NTAVSVDST-HKERRLHQMMYADRDYDMNYAESGSASGRSKP- 247
L VL GD D SA T VSVDS H ERRLHQ+M+ DRDY E S + P
Sbjct: 179 GRLKNVLNGDNDVNSAAKTCVSVDSMMHIERRLHQLMFEDRDY-----ERRSNKQETSPT 233
Query: 248 -LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
+VTV++ ++GY+VVN+ C DR KLLFD VCTLTDM+Y V+HAT+ +A+ E+YIR
Sbjct: 234 VVVTVQNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIR 293
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H DG+PISSEAERQRVI CLEAA++RR EG+ LEL D+ GLL++VTR FRENGL+VT
Sbjct: 294 HKDGSPISSEAERQRVILCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVT 353
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA---YSKSPPQES 423
R E++T A N+FYV DA+G+ + IESVR++IGL LRVK+ + K +E
Sbjct: 354 RTEISTSSEMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMNHKKGDGEEQ 413
Query: 424 GR----FSLGNLFRSRSEKFLYNLGLIKSCS 450
SLG+L + L+N GLIKSCS
Sbjct: 414 QTKAVLVSLGSLVW----RNLFNFGLIKSCS 440
>gi|297738125|emb|CBI27326.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/424 (53%), Positives = 283/424 (66%), Gaps = 65/424 (15%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+EKL+ RMNPPRV +DN + + A++I+VDSANK G LLE+VQVL DL+LII +AYISS
Sbjct: 9 DEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISS 68
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTDQ+GNK++++++ + IQ+SLG A S+RRSVGV + +HT+IELT
Sbjct: 69 DGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELT 128
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+ LKC+V+ AEVWTHN+R A+V+++T E TG I DP+ L+K+K+
Sbjct: 129 GSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQ 188
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTV 251
LL VLKG R A T + +D TV
Sbjct: 189 LLCNVLKGSNKSREAKTLL--------------------FD-----------------TV 211
Query: 252 ESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGN 311
+ TD Y V +HA V AE PEAYQEYYIRH+DG+
Sbjct: 212 CTLTDMQYVV--------------------------FHANVDAEGPEAYQEYYIRHIDGS 245
Query: 312 PISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVT 371
P+ S+AERQRVI CLEAAI+RR SEG+ LELC DR GLLSDVTRIFREN LSVTRAEVT
Sbjct: 246 PVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEVT 305
Query: 372 TRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYS-KSPPQES-GRFSLG 429
TR +AVN F+V DASG PV ++TI+S+R+ IG TIL+VK K PQES RF L
Sbjct: 306 TRAGKAVNTFHVRDASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTRFLLV 365
Query: 430 NLFR 433
LFR
Sbjct: 366 GLFR 369
>gi|115458090|ref|NP_001052645.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|38347211|emb|CAD40537.2| OSJNBa0055C08.5 [Oryza sativa Japonica Group]
gi|113564216|dbj|BAF14559.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|116309365|emb|CAH66445.1| OSIGBa0145N07.1 [Oryza sativa Indica Group]
gi|125548085|gb|EAY93907.1| hypothetical protein OsI_15680 [Oryza sativa Indica Group]
gi|125860408|dbj|BAF46927.1| ACT-domain repeat protein 6 [Oryza sativa Japonica Group]
gi|215695164|dbj|BAG90355.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 470
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/454 (49%), Positives = 303/454 (66%), Gaps = 20/454 (4%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV MNPPRV VDN + +AT+I+VDS + G+LL +VQV+ DL L+IR+AY SS
Sbjct: 16 DEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFSS 75
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTD++GNK+ +D IQ +L + +R +VG+ A E+T IELT
Sbjct: 76 DGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIELT 135
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE-ATGLPIDDPDTLAKIK 190
G DRPGLLSEV AVL+ ++C V AE+WTHN+R+A+VV++T + +G I+D +A I
Sbjct: 136 GTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADIS 195
Query: 191 RLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMY-ADRDYDMNYAESGSASGRSKPL- 248
L +L+G R+A A THKERRLHQMM+ A S S GRS
Sbjct: 196 TRLGNLLRGQSGVRAAAAAAPGGLTHKERRLHQMMFDDRDYDGGGGAASSSPRGRSPTPA 255
Query: 249 --VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAES-PEAYQEYYI 305
V+V C ++GYT V +RC DRPKLLFD VCT+TDM YV++H V +E AYQEYYI
Sbjct: 256 TEVSVTPCAERGYTAVVVRCRDRPKLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYI 315
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RHVDG+P+ SEAERQRV+ CLEAAI+RRT++G++LE+ DRAGLLSDVTRIFRENGL++
Sbjct: 316 RHVDGDPVRSEAERQRVVQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTI 375
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQE--- 422
RAE+++ +AV+ FY+ D G+PV+++TI+++R +IG LRVK + ++
Sbjct: 376 RRAEISSERGEAVDTFYLSDPQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAGGGG 435
Query: 423 ---------SGRFSLGNLFRSRSEKFLYNLGLIK 447
S F GNLF+ + N LIK
Sbjct: 436 GGATDDVAGSTAFLFGNLFKFY--RPFQNFSLIK 467
>gi|41469088|gb|AAS07062.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708792|gb|ABF96587.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 374
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/379 (57%), Positives = 277/379 (73%), Gaps = 12/379 (3%)
Query: 77 MDVFHVTDQNGNKLSE----DDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTG 132
M VF+VTDQNG K+ + D++ + I + LG + S RRSVGV+ + ++T IELTG
Sbjct: 1 MSVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 60
Query: 133 RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRL 192
DRPGLLSEV AVL++L+CNV+ AEVWTHN R A+V+ + TGL I D LA+IK
Sbjct: 61 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 120
Query: 193 LLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVE 252
L YV KG + T V++ TH ERRLHQ+M DRDY+ + + + P+V+V
Sbjct: 121 LSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVN--PTPVVSVV 178
Query: 253 SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP 312
+ DK Y+VVN+RC DRPKLLFD VCTLTDMQYVV+H +V +E PEAYQEYYIRH+DG+P
Sbjct: 179 NWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDGSP 238
Query: 313 ISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTT 372
++SEAERQRVI CLEAAI+RR SEG+ LEL DR GLLSDVTRIFRENGL+VTRAEV+T
Sbjct: 239 VNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 298
Query: 373 RGSQAVNVFYVVDASG-NPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQES-GRFSLG 429
RG +AVN FYV DA+G + V +T+E++R+EIG T+L+VK + KSPPQES RF
Sbjct: 299 RGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFLFS 358
Query: 430 NLFRSRSEKFLYNLGLIKS 448
+LFR RS LY+LGLI+S
Sbjct: 359 SLFRPRS---LYSLGLIRS 374
>gi|224134040|ref|XP_002321721.1| predicted protein [Populus trichocarpa]
gi|222868717|gb|EEF05848.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/401 (52%), Positives = 287/401 (71%), Gaps = 7/401 (1%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
D + KL+ R+N PRV VDN + AT+I+VD+ ++G+LLE+VQVL DL+L++ +AY+SS
Sbjct: 3 DAYAKLLRRVNSPRVVVDNDACEHATVIQVDTVKRQGALLEVVQVLTDLNLVMTKAYMSS 62
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFM+VF+VTD +GNK+ ++D+ I+++L A +S + + + EHT IELT
Sbjct: 63 DGVWFMNVFYVTDDHGNKIRDEDIVNCIEKALETDACMVKSTGKML---PSKEHTLIELT 119
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+DL+CNV+ AE+W HN R A+V++I ++TG I+DP L+ IK
Sbjct: 120 GTDRPGLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLIKE 179
Query: 192 LLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSASGRSKPLVT 250
LL VLKG D R+ ++S H RRLHQMM+A RD++ +E+ ++ +P VT
Sbjct: 180 LLYNVLKGHGDFRTPIVSISSPGEIHIGRRLHQMMFAARDFERPGSENDNSV---RPYVT 236
Query: 251 VESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDG 310
V C D+ YTVV DRPKL+FD VCTLTDMQY+V+H TVI +S +AYQEYYIRHVDG
Sbjct: 237 VFDCPDRDYTVVTATSIDRPKLVFDTVCTLTDMQYLVFHGTVITDSKKAYQEYYIRHVDG 296
Query: 311 NPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
P SSEAERQRVI C++AAI+RR SEG+ LEL +D GLLS +TRI RENGL AE+
Sbjct: 297 FPTSSEAERQRVIECIQAAIERRASEGLPLELFTDDHFGLLSYITRILRENGLWPKSAEI 356
Query: 371 TTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK 411
+TR +A + + V D SGNPV +TI + +++G T+L+VK
Sbjct: 357 STRNGKAKHSYIVTDVSGNPVDPKTILLIHQQMGQTVLQVK 397
>gi|168045560|ref|XP_001775245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673458|gb|EDQ59981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/440 (50%), Positives = 299/440 (67%), Gaps = 17/440 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
++E NPPRVT++N + AT+++V SAN+ G LL +VQVL DLDL+I ++ + SD
Sbjct: 12 DYETTSSSFNPPRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLDLVITKSDMFSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRA-------RSFRSLRRSVGVQAALEH 125
G WF+DVFHV D +GNK+ + V + IQ+ G + S LRRS G+ A +H
Sbjct: 72 GGWFLDVFHVVDDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQSSADLLRRSSGLTTA-DH 130
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +ELTG DRPGLLSE+ AVL+ ++CNV AEVWTHN R+A V+Y T+ TG PI+
Sbjct: 131 TVVELTGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTNTGGPIESQSL 190
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDS--THKERRLHQMMYADRDYDMNYAESGSASG 243
L IK L VLKGD D++ A + S TH ERRLHQ+MY DR ++ + +
Sbjct: 191 LELIKEQLSRVLKGDHDEQHARCKIEYASEITHVERRLHQLMYEDR---LHGEQDCDRNS 247
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ +P + ++ +++GY++V+++C DRPKLLFD VCTLTDMQYV++HA + + PE QE+
Sbjct: 248 QGRPKIQIKK-SERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSPGPETTQEF 306
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGL 363
+IRH +G + + AE Q + CLEAAI RRT+EG+ LELC DR GLLSDVT+IFRENGL
Sbjct: 307 FIRHENGCVLDTAAE-QHLKVCLEAAINRRTTEGLRLELCMNDRVGLLSDVTKIFRENGL 365
Query: 364 SVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQES 423
SV RA+VTTR +AVNVFYVVDASG V + +E++RK IG IL+VK + P S
Sbjct: 366 SVARADVTTRDDKAVNVFYVVDASGCTVDMKVVEAMRKSIGHAILQVK-GVPRQEPELSS 424
Query: 424 GRFSLGNLFRSRSEKFLYNL 443
+ SLG LFR+ SE+F+Y L
Sbjct: 425 SKLSLGGLFRT-SERFIYGL 443
>gi|449437402|ref|XP_004136481.1| PREDICTED: uncharacterized protein LOC101219701 [Cucumis sativus]
gi|449525060|ref|XP_004169538.1| PREDICTED: uncharacterized LOC101219701 [Cucumis sativus]
Length = 469
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/457 (45%), Positives = 300/457 (65%), Gaps = 22/457 (4%)
Query: 13 EFEKLVLRMNPP--RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+F+ L R+N P RV +DN S T++KVDS NK+G LLE+VQ+L DL+L I ++YIS
Sbjct: 12 DFDTLPERINGPTCRVCIDNESMEDCTIVKVDSLNKQGLLLEVVQILTDLNLSISKSYIS 71
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGP------RARSFRSLRRSVGVQAALE 124
D WFMDVFHV D+N +KL++ V IQQ++G A++ R + + + + E
Sbjct: 72 CDAGWFMDVFHVKDENSHKLTDQKVINSIQQAIGTTKGPDNSAKTRRYVNKLLNSDNSGE 131
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT IE+TG DRPGL SE+ A L+DL CNV+ A W+HN+R+A + YI+ ++T PI+DP
Sbjct: 132 HTAIEMTGTDRPGLFSEISAALADLHCNVVEAHAWSHNARLACIAYISDQSTDSPIEDPH 191
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVD---------STHKERRLHQMMYADRDYDMNY 235
LA I+ L VL+ A+ ++ +T+ ERRLHQ++ + +DYD
Sbjct: 192 RLANIEEHLSTVLRAATAPPIASWTHTLQQEVKISATITTNVERRLHQLLVSVKDYDWTS 251
Query: 236 AESGSASGRS----KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHAT 291
R K V++ESC KGY++V++ C DRP+L+FD VCTLTDMQYV++HA+
Sbjct: 252 ESISRRPKRKEEWRKTTVSIESCDQKGYSIVSIECKDRPRLMFDTVCTLTDMQYVIFHAS 311
Query: 292 VIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLL 351
+ ++ A+QEY+IRHV+G ++S+ ++ RV+ CLEAAI+RR EG+ LELC +R GLL
Sbjct: 312 ISSKKDNAFQEYFIRHVNGYALNSDYDKHRVVKCLEAAIERRVCEGVRLELCANNRVGLL 371
Query: 352 SDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK 411
SD+TR+ RENGL+V RA++ T+G +A+N FYV D SG V E +ESV+KEIG +LRVK
Sbjct: 372 SDITRVLRENGLNVVRADIATQGEKAINAFYVKDISGKEVDMEMVESVKKEIGPVVLRVK 431
Query: 412 DDAYSKSPPQES-GRFSLGNLFRSRSEKFLYNLGLIK 447
++ S PQ + RFS ++ +S+ E+ +N I+
Sbjct: 432 NETSPPSTPQITRSRFSFSDMLKSQLERLSHNFIAIR 468
>gi|168033466|ref|XP_001769236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679501|gb|EDQ65948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/428 (53%), Positives = 288/428 (67%), Gaps = 14/428 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
++E N PRVTV+ ++ AT++KV+SAN+ G LL +VQVL DLDL I ++ I D
Sbjct: 12 DYETTCSSFNSPRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLDLTITKSDIFHD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRAR----SFRSLRRSVGVQAALEHTTI 128
WFMDVFHV D NGNK + + I SLG R R S SLRRS G+ A +HT I
Sbjct: 72 LGWFMDVFHVVDSNGNKALDKQTCDHIMNSLGYRTRREQFSADSLRRSTGLTVA-DHTVI 130
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
ELTG DRPGLLSE+ AVL+ L+CNV AEVWTHN R AS+VY T +TG PI + L
Sbjct: 131 ELTGPDRPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSSTGRPITNQSKLDY 190
Query: 189 IKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
IK L V+KGD D+ A + + + TH ERRLHQ+MY DR ++ SG+ GR
Sbjct: 191 IKEQLSRVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRANEVP-DRSGNMQGR-- 247
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P + ++ ++GY+VV++ C DRPKLLFD VCTLTDMQYV+YHA + E QE++IR
Sbjct: 248 PAIHIKR-NERGYSVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGSETSQEFFIR 306
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
HV+G + + AE Q + CLEAAI RRTSEG+ LELC DR GLLSDVTRIFRENGLSV
Sbjct: 307 HVNGCTLDTAAE-QHLKACLEAAISRRTSEGLRLELCMNDRVGLLSDVTRIFRENGLSVA 365
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRF 426
RA++TTR +A+NVFYVVDASG PV + +E++R+ IG + L VK S+ P S +
Sbjct: 366 RADITTRHDKAINVFYVVDASGRPVNMKVVEAMRETIG-SSLEVKGLPRSE-PELPSTKL 423
Query: 427 SLGNLFRS 434
SLG LFR+
Sbjct: 424 SLGGLFRN 431
>gi|226498746|ref|NP_001152134.1| ACR4 [Zea mays]
gi|195653115|gb|ACG46025.1| ACR4 [Zea mays]
Length = 451
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 296/428 (69%), Gaps = 9/428 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV RMNPPRV +DN ++ AT+IKVDS N G+LL +VQV+ DL+L+IR+AY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMD F+VTD++GNK+ + IQ++L + +VG+ + ++T+IELT
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+ + V AE+WTHN+R+A+VV++T TG I+D +A I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTV 251
L +L+ D R+ A S+ + HKERRLHQMM+ DR + +A + G + V+V
Sbjct: 192 RLGNLLREHSDVRAGGGAGSL-ALHKERRLHQMMFDDRGVE-GHAATAPPDGSLRTEVSV 249
Query: 252 ESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEYYIRHVDG 310
+ ++GYT V +RC DRPKLLFD VCT+TDM+YVV+H TV AE AYQEYYIRHVDG
Sbjct: 250 -THAERGYTAVVVRCRDRPKLLFDTVCTITDMKYVVHHGTVSAEPGGGAYQEYYIRHVDG 308
Query: 311 NPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
+ I E E+QR++ CL AAI+RRT++G+ LE+ DRAGLLSD+TRIFRENGL++ RAE+
Sbjct: 309 HAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIRRAEI 368
Query: 371 TTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQE-----SGR 425
++ +AV+ FY+ D G PV+++TIE++R +IG LRV+++++ + +
Sbjct: 369 SSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNSFGTGDHADVAGAGTTA 428
Query: 426 FSLGNLFR 433
F GNLF+
Sbjct: 429 FIFGNLFK 436
>gi|414587548|tpg|DAA38119.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 295/428 (68%), Gaps = 9/428 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV RMNPPRV +DN ++ AT+IKVDS N G+LL +VQV+ DL+L+IR+AY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMD F+VTD++GNK+ + IQ++L + +VG+ + ++T+IELT
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEV AVL+ + V AE+WTHN+R+A+VV++T TG I+D +A I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 192 LLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTV 251
L +L+ D R+ A S+ + HKERRLHQMM+ DR + +A + G + V+V
Sbjct: 192 RLGNLLREHSDVRAGGGAGSL-ALHKERRLHQMMFDDRGVE-GHAAAAPPDGSLRTEVSV 249
Query: 252 ESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEYYIRHVDG 310
+ ++GYT V +RC DRPKLLFD VCT+TDM+YVV+H TV AE AYQEYYIRHVDG
Sbjct: 250 -THAERGYTAVVVRCRDRPKLLFDTVCTITDMEYVVHHGTVSAEPGGGAYQEYYIRHVDG 308
Query: 311 NPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
+ I E E+QR++ CL AAI+RRT++G+ LE+ DRAGLLSD+TRIFRENGL++ RAE+
Sbjct: 309 HAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIRRAEI 368
Query: 371 TTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQE-----SGR 425
++ +AV+ FY+ D G PV+++TIE++R +IG LRV+++ + + +
Sbjct: 369 SSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNPFGTGDDADMAGAGTTA 428
Query: 426 FSLGNLFR 433
F GNLF+
Sbjct: 429 FIFGNLFK 436
>gi|255568655|ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
gi|223535459|gb|EEF37129.1| amino acid binding protein, putative [Ricinus communis]
Length = 477
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/466 (47%), Positives = 303/466 (65%), Gaps = 30/466 (6%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
EFE L+ R+ PPRV +DN + + T++KVDSANK G LLE+VQVL DLDL+I ++YI SD
Sbjct: 12 EFESLIERIYPPRVCIDNEACQDCTVVKVDSANKHGILLEMVQVLTDLDLVISKSYICSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS------LRRSV-GVQAALEH 125
G WFMDVFHVTDQ GNKL+++ + IQQ+L R+ S L+R V + +H
Sbjct: 72 GGWFMDVFHVTDQLGNKLTDESLILYIQQALCTNRRAGASQELQNCLKREVRPRHVSTDH 131
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+TG DRPG+LSE+ AVL++L+C+V A WTHNSR A ++Y+ +G PI D +
Sbjct: 132 TAMEMTGIDRPGMLSEISAVLAELQCHVTAAVAWTHNSRAACIIYMEDGLSGGPITDSNK 191
Query: 186 LAKIKRLLLYVLK---GDRDKRSANTAVSV-DSTHKERRLHQMMYADRDYD--MNYAESG 239
LA ++ L V++ G + RS A V TH ERRLHQ+M A DY+ +
Sbjct: 192 LAHVEEQLQNVVEAHHGIGEMRSVRLASPVTGQTHTERRLHQLMSATLDYEPCCGCTDGD 251
Query: 240 SASGR--SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP 297
+A R +K V++ESC +KGY+VVN+R DRPKLLFD +C LTDMQYVV+HA V ++
Sbjct: 252 AAHQRNCTKIHVSIESCKEKGYSVVNMRSMDRPKLLFDTLCALTDMQYVVFHAAVSSKGT 311
Query: 298 EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRI 357
A QEY+IRH DG + +E+ER ++ CL AA +RR S G+ L++ +R GLLSDVTR+
Sbjct: 312 MARQEYFIRHKDGCTLDTESERHKLTKCLIAATERRASHGLRLDISTHNRVGLLSDVTRV 371
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRV-KDDAYS 416
FRENGLS++RAE+ +G +AV FY+ DASG+ + T+E VRKEIG ++L V K ++
Sbjct: 372 FRENGLSISRAEIGLQGDRAVGSFYITDASGDEANTHTLELVRKEIGGSVLVVNKSPGWT 431
Query: 417 KSPPQESG--------------RFSLGNLFRSRSEKFLYNLGLIKS 448
P +G +FSLG+L S+ E+ N G I+S
Sbjct: 432 PRTPSTAGISRTSSGSVGEEKPKFSLGSLLWSQLERLSGNFGSIRS 477
>gi|302812986|ref|XP_002988179.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
gi|300143911|gb|EFJ10598.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
Length = 482
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/460 (46%), Positives = 294/460 (63%), Gaps = 30/460 (6%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L +NPPRV ++N + AT+IK+DS N+ G LLE+VQVL DLDL I +AY+SSD
Sbjct: 16 EYESLNASLNPPRVVIENAAFTDATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYVSSD 75
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTG 132
WFMDVFHVTD +GNK+++++V + IQ+ + G +HT IEL+G
Sbjct: 76 AGWFMDVFHVTDIDGNKITDEEVLKFIQEVCSAEGGEITRVSLGTGPH---QHTAIELSG 132
Query: 133 RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE-ATGLPIDDPDTLAKIKR 191
+RPGLLSEVF+ LS + CNV A VWTHN R+A ++++ + ++G PI+D D L IK
Sbjct: 133 PNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIEDCDKLKDIKD 192
Query: 192 LLLYVLKGDRDKRSANTAVSVDS----THKERRLHQMMYADRDYDM----------NYAE 237
L V++ + +R + D TH ERRLHQMM AD D+ + E
Sbjct: 193 RLCRVIRANDGERGGGAGRTADFFSGLTHMERRLHQMMSADEDHSGESRELEGRLGDETE 252
Query: 238 SGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP 297
+ +G+ +P VTV +C ++GY+VVN+ C DR KLLFD VCTLTDM Y+++HAT+++E
Sbjct: 253 QRTVNGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATILSEGY 312
Query: 298 EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRI 357
AYQE+YIRH DG + ++ ERQR+I L AAI+RR EG+ LELC DR GLLSDVT++
Sbjct: 313 FAYQEFYIRHTDGCTLETDEERQRLIKRLVAAIQRRFPEGLRLELCTYDRVGLLSDVTKV 372
Query: 358 FRENGLSVTRAEV-TTRGSQAVNVFYVVD-ASGNPVKSETIESVRKEIGLTILRVKDDAY 415
F +GL VTRA V TTR N FYV D ASG+ V T+E++R+E+G +L V+
Sbjct: 373 FHRHGLCVTRAHVSTTRAGTVANTFYVTDAASGDAVDMRTVEAIREELGQAMLNVRS--- 429
Query: 416 SKSPPQESG-------RFSLGNLFRSRSEKFLYNLGLIKS 448
+ PQ G RFSL F+ SE+ LY+LGLI S
Sbjct: 430 APVCPQLLGLDDSPSPRFSLAAFFKLHSERILYSLGLITS 469
>gi|255635655|gb|ACU18177.1| unknown [Glycine max]
Length = 245
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/242 (85%), Positives = 221/242 (91%)
Query: 165 MASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQM 224
MASVVYIT EATGL IDDPD LAKIK+LLLYVLKGD DK+SANTAVSV STHK+RRLHQ+
Sbjct: 1 MASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQL 60
Query: 225 MYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQ 284
MYADRDYD++ +SGS S R+K LVTV+ C DKGYTVVNLRCPDRPKLLFD VCTLTDMQ
Sbjct: 61 MYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQ 120
Query: 285 YVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCC 344
YVVYH TVIAE PEAYQEYYIRHVDG+PISSEAERQRVI+CLEAA++RRTSEGI LELC
Sbjct: 121 YVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELCG 180
Query: 345 EDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIG 404
EDR GLLSDVTRIFRENGLSV RAEVTTRGSQA+NVFYV D SGNPVKSETIE+VRKEIG
Sbjct: 181 EDRVGLLSDVTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEIG 240
Query: 405 LT 406
LT
Sbjct: 241 LT 242
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFH 81
N VTVD+ ++ T++ + ++ L + V L D+ ++ + ++G ++
Sbjct: 81 NKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYY 140
Query: 82 VTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSE 141
+ +G+ +S + +R+ L R R S G++ +EL G DR GLLS+
Sbjct: 141 IRHVDGSPISSEAERQRVIHCLEAAVRR----RTSEGIK-------LELCGEDRVGLLSD 189
Query: 142 VFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
V + + +V AEV T S+ +V Y+T + +G P+
Sbjct: 190 VTRIFRENGLSVNRAEVTTRGSQAMNVFYVT-DVSGNPV 227
>gi|413937243|gb|AFW71794.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937244|gb|AFW71795.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937245|gb|AFW71796.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
Length = 460
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/418 (51%), Positives = 284/418 (67%), Gaps = 20/418 (4%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E R+NPPRV +DNT+ TL+KVDS NK G LLE++QVL+DLDL I +AYI+SD
Sbjct: 8 EYENFNQRINPPRVCIDNTTCSDCTLVKVDSMNKNGILLEVLQVLSDLDLHIFKAYITSD 67
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPR-----ARSFRSLRRSVGVQAALEHTT 127
G WFMDVFHV D+ G K+++D + I+++LGP A+ S RSVG+ + +HT
Sbjct: 68 GGWFMDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLGAKGSNSAGRSVGLHSIGDHTA 127
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IEL G DR GLLSE+FAVL+DL+CNV+ AEVWTH R+A VVY+ ATG IDDPD +A
Sbjct: 128 IELKGPDRRGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGQAIDDPDRVA 187
Query: 188 KIKRLLLYVLKGDRDKRS-----------ANTAVSVDSTHK-ERRLHQMMYADRD-YDMN 234
+++ L +VL+G AN A + + H +RRLHQ+M+AD D +
Sbjct: 188 RVEDRLRHVLRGYGGGGGAGDDDDGSGAHANFAAASSTPHHVDRRLHQLMHADVDAVHGD 247
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
A + + +P VTVE C +K Y+VVN++C DR KLLFD VCTLTDM+YVV+HA V +
Sbjct: 248 GAHAAAGGEGDRPAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYVVFHAAVSS 307
Query: 295 ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDV 354
E+ QE YIR DG + + E ++VI CLEAAI RR SEG +LE+C DR GLLSDV
Sbjct: 308 EANYGIQELYIRRKDGKTLLKD-EAEKVIRCLEAAISRRVSEGFTLEVCGRDRVGLLSDV 366
Query: 355 TRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLT-ILRVK 411
TR+ RE+GL+V+RA+VTT G QA NVFYV + SG PV +T+E +R + G T +L VK
Sbjct: 367 TRVLREHGLTVSRADVTTAGGQATNVFYVRNPSGQPVDMKTVEGLRGQFGQTAMLNVK 424
>gi|115474541|ref|NP_001060867.1| Os08g0118100 [Oryza sativa Japonica Group]
gi|42407901|dbj|BAD09041.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725644|dbj|BAD33111.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113622836|dbj|BAF22781.1| Os08g0118100 [Oryza sativa Japonica Group]
Length = 441
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/457 (49%), Positives = 299/457 (65%), Gaps = 36/457 (7%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN ATL++VDSA K G LLE VQVL DLDL I +AYIS
Sbjct: 4 LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYIS 63
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH-TTIE 129
SDG WFMDVFHVTD+ G KL++D V I+QSLG R AALE T +E
Sbjct: 64 SDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARP--------AALEGLTALE 115
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189
LTG DR GL+SEVFAVL+D+ C V+ A WTH R+ +V++ E D + +A+I
Sbjct: 116 LTGADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARI 170
Query: 190 KRLLLYVLKGD--RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
+ L ++L+GD + + H ERRLHQ+M ADRD + A + +AS P
Sbjct: 171 EARLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAAS--PTP 228
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
V+V+S ++GY+VV ++C DRPKLLFD VCTLTDM YVV+H T+ +A+QE+YIRH
Sbjct: 229 AVSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRH 288
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
DG+PISSEAER RV CL+ AI+RR+ EG+ LELC DR LLSDVTR FRENGL V +
Sbjct: 289 ADGSPISSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQ 348
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA----YSKSPPQES 423
AEV+T+G A NVFYV DA+G+ V+ I++VR+ +G+ L +++ Y K+ P+++
Sbjct: 349 AEVSTKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDA 408
Query: 424 ----------GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
G F LGN + + L +LGLIKSCS
Sbjct: 409 VDGNGGGGGIGLFYLGNFVK----RNLVSLGLIKSCS 441
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/454 (47%), Positives = 305/454 (67%), Gaps = 31/454 (6%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+EKLV+RMN PRV +DN +T++K+DSA G LLE VQ+L D++L I++AYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG+W MDVFHV+D NGNKL+++++ I++S+ + G+ T +ELT
Sbjct: 68 DGKWNMDVFHVSDLNGNKLTDENLIRYIEKSI--ETSHYCKTEGYTGL------TALELT 119
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID-DPDTLAKIK 190
G DR GLLSEVFAVL+DL+C+V+ A+ WTHN R+AS++Y+ +G PID D D + +++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 191 RLLLYVLKGDRD-KRSANTAVSVD-STHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
L +LK D + T VS +TH ERRLHQ M+ DRDY+ + S P+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS------PI 233
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V+V++ +GY+VVNL+C DR KLLFD VCTLTDM Y+V+HA + A+ E+Y+RH
Sbjct: 234 VSVQNLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHS 293
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG+P+SSE ERQR+I CL+AAI+RRT +G+ LELC DR GLL++VTR+ RENGL++ RA
Sbjct: 294 DGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRVLRENGLNIARA 353
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD-------DAYSKSPPQ 421
E++T+ A NVFYV DA+GN + E I+S+R++IG+ L VK+ +A K Q
Sbjct: 354 EISTKDGVARNVFYVTDANGNLIDPEIIQSIREKIGIDDLSVKEPFPISCREAVEKEQHQ 413
Query: 422 ES----GRFSLGNLFRSRSE---KFLYNLGLIKS 448
E+ GR+ G + S + LY+LGLIKS
Sbjct: 414 EAQDHQGRYGGGTVLVSLGSLVMRNLYHLGLIKS 447
>gi|168012723|ref|XP_001759051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689750|gb|EDQ76120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/429 (50%), Positives = 290/429 (67%), Gaps = 15/429 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
++E NPP+VTV+ +N AT++KV SAN+ G LL +VQVL DLDL I ++ I D
Sbjct: 12 DYETTFSSFNPPKVTVETEANENATVVKVYSANRHGILLNVVQVLTDLDLTITKSDIFHD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSE---RIQQSL-GPRARSFRSLRRSVGVQAALEHTTI 128
WFMDVFHV D NGNK + + +++ +L A + LRRS G+ + EHT I
Sbjct: 72 LGWFMDVFHVVDSNGNKTLDKRTCDHILKVRHTLPHSSAAAIYHLRRSTGLTCS-EHTVI 130
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
ELTG DRPGLLSE+ AVL+ L+CNV GAEVWTHN R+AS++Y TG PI L
Sbjct: 131 ELTGPDRPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGRPITAQSKLDH 190
Query: 189 IKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
I+ L V+KGD D+ A + + + TH ERRLHQ+MY DR +N S + + +
Sbjct: 191 IRGQLSKVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDR---VNEVPHVSGNPQQR 247
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P++ ++ ++GY+VV+++C DR KLLFD VCTLTDMQYV+YHA + + PE QE++IR
Sbjct: 248 PVIQIKR-NERGYSVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPETSQEFFIR 306
Query: 307 HVDGNPI-SSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
HV+G + +++AE +V CLEAAI RRTSEG+ LELC DR GLLSDVTR+FRENGLSV
Sbjct: 307 HVNGCTLDTADAEHLKV--CLEAAINRRTSEGLRLELCMSDRIGLLSDVTRLFRENGLSV 364
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGR 425
RA++TTR +AVNVFYVVDASG+PV +E++RK +G +IL VK + P S +
Sbjct: 365 ARADITTRDDKAVNVFYVVDASGSPVNMNVVETMRKSLGHSILEVKGLPRPE-PELPSSK 423
Query: 426 FSLGNLFRS 434
SLG LFR+
Sbjct: 424 LSLGGLFRN 432
>gi|242080357|ref|XP_002444947.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
gi|241941297|gb|EES14442.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
Length = 443
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/456 (51%), Positives = 295/456 (64%), Gaps = 32/456 (7%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN ATL++VDSA KRG LLE VQVL DLDL I +AYIS
Sbjct: 4 LDEYEKLVIRMNMPRVVIDNAICPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYIS 63
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH-TTIE 129
SDG WFMDVFHVTD+ G KL++D V IQQSLG R AALE T +E
Sbjct: 64 SDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNEPARP--------AALEGLTALE 115
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE--ATGLPIDDPDTLA 187
LTG DR GLLSEVFAVL+D++C+V+ A WTH R+A VV++ E A+G DD D +A
Sbjct: 116 LTGPDRTGLLSEVFAVLADMQCSVVDARAWTHRGRLACVVFLRGEELASGASADDDDRVA 175
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDST-HKERRLHQMMYADRDYDMNYAESGSASGRSK 246
+I L ++L+GD + A AV H +R LHQ+M AD ++ A S A S
Sbjct: 176 RILARLGHLLRGDGEAPGAVAAVPAAGVAHADRCLHQLMAAD----LDRAPSFPAPALS- 230
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V+V+S ++GY+VV + C DRPKLLFD VCTL DM YVV+H TV A QE+YIR
Sbjct: 231 PAVSVQSWAERGYSVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIR 290
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
DG+PI SEAER+R+ CL+AAI+RR+ EG+ LELC DR GLLS+VTR FRENGL V
Sbjct: 291 RADGSPIRSEAERERLNQCLQAAIERRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVV 350
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRF 426
+AEV+T+G A NVFYV DA+G I++VR+ +G+ L V ++ PPQ +
Sbjct: 351 QAEVSTKGDLASNVFYVTDAAGKAADQSAIDAVRERVGMDRLVVSEE---PRPPQVFSKD 407
Query: 427 SLGNLFRSRS------------EKFLYNLGLIKSCS 450
G+ S ++ LYNLGLIKSCS
Sbjct: 408 GPGDRDDSVGGGLGLVYLGNLVKRNLYNLGLIKSCS 443
>gi|357149509|ref|XP_003575136.1| PREDICTED: uncharacterized protein LOC100839017 [Brachypodium
distachyon]
Length = 450
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/440 (50%), Positives = 292/440 (66%), Gaps = 22/440 (5%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E R+NPPRV +DN + + T++KVDS NK G LLE+VQVL+DLDL I +AYI+SD
Sbjct: 8 EYENFNQRINPPRVCIDNDTMSECTVVKVDSMNKNGILLEVVQVLSDLDLTILKAYITSD 67
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRA------RSFRSLRRSVGVQAALEHT 126
G WFMDVFHV ++ G K+++D + I+++LGP + + S RSVG+ + +HT
Sbjct: 68 GGWFMDVFHVLNKQGQKVTDDKTIKYIEKALGPGSNLPSAKKGGGSPGRSVGMHSIGDHT 127
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID-DPDT 185
IEL G DR GLLSE+FAVL++L+CNV+ AEVWTH +R+A VVY+ ATG PID D
Sbjct: 128 AIELKGPDRTGLLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPIDVDTRR 187
Query: 186 LAKIKRLLLYVLKG----DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
+ I+ L VL+G D D A+T +V STH +RRLHQ+M AD + ++ G
Sbjct: 188 MTSIEHRLRNVLRGHGGDDEDGTGAHTEFAVGSTHVDRRLHQLMNADMEL-VDAQGEGEE 246
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
VTV C +K Y+VVN+RC DR KLLFD VCTLTDMQYVV HA V ++ Q
Sbjct: 247 VADDGMSVTVGYCKEKDYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDGLYGVQ 306
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFREN 361
E +IR DG + + E +V+ CL+AAI RR SEG +LE+C DR GLLS+VTR+ RE+
Sbjct: 307 ELFIRRKDGRTLLKD-EEDKVVKCLQAAISRRVSEGFTLEVCGRDRVGLLSEVTRVLREH 365
Query: 362 GLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTI-LRVKD-DAYSKSP 419
GL+VTRA+V T G QA+NVFYV DASG V +TIE +R +IG T+ L VK A + P
Sbjct: 366 GLTVTRADVATVGEQAMNVFYVRDASGQTVDMKTIEGLRGQIGQTVMLNVKKVPAPAVKP 425
Query: 420 PQ-------ESGRFSLGNLF 432
P+ ++G FS G+LF
Sbjct: 426 PEPARGGVAKTGFFSFGSLF 445
>gi|22328873|ref|NP_194009.2| ACT domain repeat 7 protein [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
gi|332659257|gb|AEE84657.1| ACT domain repeat 7 protein [Arabidopsis thaliana]
Length = 449
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/454 (47%), Positives = 304/454 (66%), Gaps = 31/454 (6%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+EKLV+RMN PRV +DN +T++K+DSA G LLE VQ+L D++L I++AYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG+W MDVFHV+D NG+KL+++++ I++S+ + G+ T +ELT
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSI--ETSHYCKTEGYTGL------TALELT 119
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID-DPDTLAKIK 190
G DR GLLSEVFAVL+DL+C+V+ A+ WTHN R+AS++Y+ +G PID D D + +++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 191 RLLLYVLKGDRD-KRSANTAVSVD-STHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
L +LK D + T VS +TH ERRLHQ M+ DRDY+ + S P+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS------PI 233
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V+V++ +GY+VVNL+C DR KLLFD VCTLTDM Y+V+HA + A+ E+Y+RH
Sbjct: 234 VSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHS 293
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG+P+SSE ERQR+I CL+AAI+RRT +G+ LELC DR GLL++VTRI RENGL++ RA
Sbjct: 294 DGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARA 353
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD-------DAYSK---- 417
E++T+ S A NVFYV DA+GN + E I+S+R++IG+ L VK+ +A K
Sbjct: 354 EISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVKEPFPISCREAVEKEQHI 413
Query: 418 SPPQESGRFSLGNLFRSRSE---KFLYNLGLIKS 448
P GR+ G + S + LY+LGLIKS
Sbjct: 414 EPQDHQGRYGGGTVLVSLGSLVMRNLYHLGLIKS 447
>gi|357487955|ref|XP_003614265.1| ACR4 [Medicago truncatula]
gi|355515600|gb|AES97223.1| ACR4 [Medicago truncatula]
Length = 362
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/343 (57%), Positives = 257/343 (74%), Gaps = 3/343 (0%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
+S S + DE+EKL RMNPPRV +DN +++ AT+I+VDSANK+G LLE+VQ+L DL+LI
Sbjct: 11 YSQSHYMDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLI 70
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I +AYISSDG WFMDVF+VTDQ+GNK++++ + + I++SLGP + F + RSVGV+
Sbjct: 71 ITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPES-CFATTMRSVGVKQTP 129
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
+HT IEL G DRPGLLSEV AVL++LKCN++ AEVWTHN R A+V+++T E TG I D
Sbjct: 130 DHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDS 189
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
L+ IK LL VL G KR A T V+ DSTH +RRLHQMM+ DRDY+ +
Sbjct: 190 QRLSLIKELLCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYER--VDDDDFDE 247
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ +P V V + +DK Y+VV + C DRPKL+FD VCTLTDMQYVV+HA + AE P+AYQEY
Sbjct: 248 KQRPNVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEY 307
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCED 346
YI+H+DG+P+ S+AERQRVI+CLEAAI+RR SE L L D
Sbjct: 308 YIKHIDGSPVKSDAERQRVIHCLEAAIERRVSEVRDLMLVLSD 350
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V +++ + TV+ + ++ +L + V LTD+ ++ A + ++ + +
Sbjct: 31 PRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 90
Query: 307 HVDGNPISSEAERQRV------INCLEAAIK----RRTSEGISLELCCEDRAGLLSDVTR 356
DGN ++ E + +C ++ ++T + ++EL DR GLLS+V+
Sbjct: 91 DQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMGSDRPGLLSEVSA 150
Query: 357 IFRENGLSVTRAEVTTRGSQAVNVFYVVD-ASGNPVKSETIESVRKEIGLTIL 408
+ ++ AEV T +A V +V D +G+ + S+ KE+ +L
Sbjct: 151 VLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKELLCNVL 203
>gi|302760087|ref|XP_002963466.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
gi|300168734|gb|EFJ35337.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
Length = 503
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/479 (45%), Positives = 301/479 (62%), Gaps = 47/479 (9%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L +NPPRV ++N + AT+IK+DS N+ G LLE+VQVL DLDL I +AY+SSD
Sbjct: 16 EYESLNASLNPPRVVIENAAFTGATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYVSSD 75
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSL------------------- 113
WFMDVFHVTD +GNK+++++V + IQ+SL +A +
Sbjct: 76 AGWFMDVFHVTDIDGNKITDEEVLKFIQESLEKKAAEMPWIGSKCSNPSKVCSAEGGEIT 135
Query: 114 RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
R S+G +HT IEL+G +RPGLLSEVF+ LS + CNV A VWTHN R+A ++++ +
Sbjct: 136 RVSLGT-GPHQHTAIELSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDN 194
Query: 174 E-ATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS----THKERRLHQMMYAD 228
++G PI+D D L IK L V++ + +R + + TH ERRLHQMM AD
Sbjct: 195 ACSSGGPIEDCDKLKDIKDRLCRVIRANDGERGGGAGRTAEFFSGLTHMERRLHQMMSAD 254
Query: 229 RDYD----------MNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVC 278
D+ + E + +G+ +P VT+ +C ++GY+VVN+ C DR KLLFD VC
Sbjct: 255 EDHCGESRELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLLFDTVC 314
Query: 279 TLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGI 338
TLTDM Y+++HAT+++E AYQE+YIRH DG + ++ ERQR+I L AAI+RR EG+
Sbjct: 315 TLTDMDYMIFHATILSEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQRRFPEGL 374
Query: 339 SLELCCEDRAGLLSDVTRIFRENGLSVTRAEV-TTRGSQAVNVFYVVD-ASGNPVKSETI 396
LELC DR GLLSDVT++F +GL VTRA + TTR N FYV D ASG+ V T+
Sbjct: 375 RLELCTYDRVGLLSDVTKVFHRHGLCVTRAYISTTRAGTVANTFYVTDAASGDAVDMRTV 434
Query: 397 ESVRKEIGLTILRVKDDAYSKSPPQESG-------RFSLGNLFRSRSEKFLYNLGLIKS 448
E++R+E+G +L V+ + PQ G RFSL F+ SE+ LY+LGLI S
Sbjct: 435 EAIREELGQAMLNVRS---APVCPQLLGLDDSPSPRFSLAAFFKLHSERILYSLGLITS 490
>gi|125562330|gb|EAZ07778.1| hypothetical protein OsI_30031 [Oryza sativa Indica Group]
Length = 463
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/412 (51%), Positives = 284/412 (68%), Gaps = 9/412 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV RMNPP V +DN S AT+I+VD K G LLE VQVL DL+L+I +AYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT-IEL 130
DG WFMDVF+VTDQ+GNK+ +V++ I++ L G A E TT IEL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVPPASSPAGGAAPSEETTCIEL 134
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
TG DRPGLLSEV AVL+ L+CN++ AEVWTH+ R A+V+ IT EATGLP+ D L++++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 191 RLLLYVLKGDRD----KRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
LL V++GD D R +TAVS+ + + ERRLH++M D D E G +
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 247 PLVTVE-SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE---SPEAYQE 302
V CT++ YTVV LRC DRP+LLFD +C LTD+ YVV+H TV AE + EAYQE
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQE 314
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENG 362
YY+RHVDG+P+ +AER R++ CLEAA++RR S+G+ LE+ EDRAGLLS++TR+FREN
Sbjct: 315 YYVRHVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRENS 374
Query: 363 LSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA 414
LS+ RA +TT+ +A + FYV DA GNPV + +E++ +++G +LRVK +
Sbjct: 375 LSIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNG 426
>gi|115477501|ref|NP_001062346.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|42761394|dbj|BAD11662.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|45735790|dbj|BAD13153.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113624315|dbj|BAF24260.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|125860404|dbj|BAF46925.1| ACT-domain repeat protein 8 [Oryza sativa Japonica Group]
gi|215692655|dbj|BAG88075.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741115|dbj|BAG97610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/412 (51%), Positives = 284/412 (68%), Gaps = 9/412 (2%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV RMNPP V +DN S AT+I+VD K G LLE VQVL DL+L+I +AYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT-IEL 130
DG WFMDVF+VTDQ+GNK+ +V++ I++ L G A E TT IEL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIEL 134
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
TG DRPGLLSEV AVL+ L+CN++ AEVWTH+ R A+V+ IT EATGLP+ D L++++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 191 RLLLYVLKGDRD----KRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
LL V++GD D R +TAVS+ + + ERRLH++M D D E G +
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 247 PLVTVE-SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE---SPEAYQE 302
V CT++ YTVV LRC DRP+LLFD +C LTD+ YVV+H TV AE + EAYQE
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQE 314
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENG 362
YY+RHVDG+P+ +AER R++ CLEAA++RR S+G+ LE+ EDRAGLLS++TR+FREN
Sbjct: 315 YYVRHVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRENS 374
Query: 363 LSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA 414
LS+ RA +TT+ +A + FYV DA GNPV + +E++ +++G +LRVK +
Sbjct: 375 LSIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNG 426
>gi|224129764|ref|XP_002320665.1| predicted protein [Populus trichocarpa]
gi|222861438|gb|EEE98980.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/470 (46%), Positives = 296/470 (62%), Gaps = 34/470 (7%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
EFE L+ R+ PPRV VDN + + TLIKVDSANK+G LLE+VQVL DLDL+I ++YISSD
Sbjct: 13 EFESLMERIYPPRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLVISKSYISSD 72
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL------GPRARSFRSLRRSV-GVQAALEH 125
G WFM+VFHVTDQ G+KL++D + IQQ+L G S SL R V A+ +H
Sbjct: 73 GGWFMEVFHVTDQLGSKLTDDSLILYIQQALCVDRRRGVSKESQTSLHREVRPPYASTDH 132
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+TG DRPGLLSE+ AVLS L+C+V + VWTHN+R AS++Y+ G PI DP
Sbjct: 133 TAMEITGTDRPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGPITDPKR 192
Query: 186 LAKIKRLLLYVLK-----GDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
LA ++ L V++ G+R TH RRLHQ+MYA+ DY+ +G
Sbjct: 193 LAHVQEQLENVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYANMDYEPCQGCNGG 252
Query: 241 ASGR----SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAES 296
+K V+++SC +KGY+VVN+R DRPKLLFD +C LTDMQYVV+HA V A+
Sbjct: 253 GLAHRNNCTKIHVSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAAVSAKG 312
Query: 297 PEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTR 356
A QEY+IR DG + +E+ER ++ CL AAI+RR S G L++C +R GLLS+VTR
Sbjct: 313 TMADQEYFIRQQDGCTLDTESERHKLTQCLIAAIERRVSHGARLDICTHNRMGLLSNVTR 372
Query: 357 IFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-- 414
FRENGLS++RAE+ T G +AV FYV DASG + I+ V+KE+G +++ V
Sbjct: 373 AFRENGLSISRAEIGTNGDRAVGSFYVTDASGYEANPQAIDEVKKEMGGSVVVVNKSPGW 432
Query: 415 ---YSKSPP-------------QESGRFSLGNLFRSRSEKFLYNLGLIKS 448
S++P +E R S G+LF S+ ++ N I+S
Sbjct: 433 TPKTSRTPSVGSVSRNSSGSIDEEKPRLSPGSLFWSQLKRLSSNFSSIRS 482
>gi|115446687|ref|NP_001047123.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|46389854|dbj|BAD15455.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725785|dbj|BAD33316.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113536654|dbj|BAF09037.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|215701465|dbj|BAG92889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 481
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/470 (48%), Positives = 294/470 (62%), Gaps = 51/470 (10%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E R+NPPRV +DN++ TL+KVDS NK G LLE+VQVL+DLDL I +AYI+SD
Sbjct: 8 EYENFSQRINPPRVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSD 67
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGP------RARSFRSLRRSVGVQAALEHT 126
G WFMDVFHV D+ G K++++ + I+++LGP A+ S RSVG+ + +HT
Sbjct: 68 GGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHT 127
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTL 186
IEL G DR GLLSEVFAVL++L CNV+ AEVWTH +R+A VVY+ A+G + DP L
Sbjct: 128 AIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRL 187
Query: 187 AKIKRLLLYVLKGDRDKRSA------------NTAVSVDSTHKERRLHQMMYADRDYDMN 234
++I+ L VL+G ++ + +TH +RRLHQ+M+AD D D +
Sbjct: 188 SRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDD 247
Query: 235 YAESGSA----------SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQ 284
A + +P+VTVE C +K Y+VVN++C DR KLLFD VCTLTDM
Sbjct: 248 DGLDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMH 307
Query: 285 YVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCC 344
YVV HA+V ++ QE YIR DG + + E RVI CLEAAI RR SEG +LELC
Sbjct: 308 YVVSHASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCG 366
Query: 345 EDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIG 404
DR GLLSDVTR+ RE+GL+VTRA+VTT G QA+NVFYV DASG PV +TIE +R ++G
Sbjct: 367 RDRVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVG 426
Query: 405 LTI-LRVKD--------------DAYSKSPPQESGR-------FSLGNLF 432
T+ L VK A KSP Q + FS GNLF
Sbjct: 427 HTVMLNVKKVPSSPSSSSAAAAAAANGKSPGQPASGALSRTSFFSFGNLF 476
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/454 (47%), Positives = 303/454 (66%), Gaps = 31/454 (6%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+EKLV+RMN PRV +DN +T++K+DSA G LLE VQ+L D++L I++AYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG+W MDVFHV+D NG+KL+++++ I++S+ + G+ T +ELT
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSI--ETSHYCKTEGYTGL------TALELT 119
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID-DPDTLAKIK 190
G DR GLLSEVFAVL+DL+C+V+ A+ WTHN R+AS++Y+ +G PID D D + +++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 191 RLLLYVLKGDRD-KRSANTAVSVD-STHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
L +LK D + T VS +TH ERRLHQ M+ DRDY+ + S P+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS------PI 233
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V+V++ +GY+VVNL+C DR KLLFD VCTLTDM Y+V+HA + A+ E+Y+RH
Sbjct: 234 VSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHS 293
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG+P+SSE ERQR+I CL+AAI+RRT +G+ LELC DR GLL++VTRI RENGL++ RA
Sbjct: 294 DGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARA 353
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD-------DAYSK---- 417
E++T+ S A NVFYV DA+GN + E I+S+R++IG+ L VK+ +A K
Sbjct: 354 EISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVKEPFPISCREAVEKEQHI 413
Query: 418 SPPQESGRFSLGNLFRSRSE---KFLYNLGLIKS 448
P R+ G + S + LY+LGLIKS
Sbjct: 414 EPQDHQERYGGGTVLVSLGSLVMRNLYHLGLIKS 447
>gi|359496882|ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
gi|296085715|emb|CBI29515.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/459 (46%), Positives = 298/459 (64%), Gaps = 29/459 (6%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
++E L+ R++PPRV +DN + + TL+KVDSANK G LLE+VQVL DL+L+I ++YI SD
Sbjct: 12 DYESLIERIHPPRVCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLELVISKSYICSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF--RSLRRSVGVQ-----AALEH 125
G WFMDVFHVTDQ GNKL+++ + IQQ+L + + L+ +G + + EH
Sbjct: 72 GGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRKQGISKELQARLGREMNPRHVSTEH 131
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T E+TG DRPGL+SE+ AVL++L C+V A WTHNSR+A ++ + E G PI DP+
Sbjct: 132 TAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPER 191
Query: 186 LAKIKRLLLYVLK-----GDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
LA ++ L V++ G+R K TA TH +RRLHQ+M+AD+DY+
Sbjct: 192 LAHVEEQLENVVEARHQSGERRKVRL-TAPVAGRTHTDRRLHQLMFADKDYERCCGGCDG 250
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
+S R + V++E+C +KGY+VVN++ DRPKLLFD VCTLTDMQYVV+HA V ++ A
Sbjct: 251 SSDRIQ--VSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAV 308
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
QEY+IR +DG + +++ER RV CL AAI+RR + G+ L++ ++R GLLSD+TR+FRE
Sbjct: 309 QEYFIRQMDGCTLGTQSERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRE 368
Query: 361 NGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP 420
NGLS+ AE+ G +A FYV D SG V T+E +RKEIG TI+ V + S P
Sbjct: 369 NGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLP 428
Query: 421 -------------QESGRFSLGNLFRSRSEKFLYNLGLI 446
+ RFSLG L+ S+ E+F N G I
Sbjct: 429 ASPSRDRSTASSVENRPRFSLGTLW-SQIERFSSNFGPI 466
>gi|224095019|ref|XP_002310330.1| predicted protein [Populus trichocarpa]
gi|222853233|gb|EEE90780.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/471 (47%), Positives = 294/471 (62%), Gaps = 35/471 (7%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
EFE L+ R+ PPRV +DN + + TL+K DSANK G LLE+VQVL DLDL+I ++YISSD
Sbjct: 12 EFESLIERIYPPRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLDLVISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS------LRRSV-GVQAALEH 125
G WFMDVFHVTDQ GNKL+++ + IQQ+L R S L R V + EH
Sbjct: 72 GGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRRRGVSKELPTCLNREVRPRHVSTEH 131
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
TT+E+ G DRPGLLSE+ AVL +L+C+V A WTHN+R AS++Y+ G PI DP
Sbjct: 132 TTLEMAGTDRPGLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDGFRGGPITDPKR 191
Query: 186 LAKIKRLLLYVLK-----GDRDKRSANTAVSVDSTHKERRLHQMMYADRDYD-MNYAESG 239
LA ++ L V++ G+R TH ERRLHQ+MYA+ DY+ G
Sbjct: 192 LAHVQEQLENVVEARHGMGERRSVRLTAPAPGQQTHTERRLHQLMYANIDYEPCQGCNGG 251
Query: 240 SASGR---SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAES 296
A+ R +K V +ESC +KGY+VVN+R DRPKLLFD +C LTDMQYVV+HA V ++
Sbjct: 252 GAAHRNNCTKTHVFIESCEEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAVVSSKG 311
Query: 297 PEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTR 356
A QEY+IR DG + +++ER ++ CL AAI+RR S G+ L++ +R GLLSD+TR
Sbjct: 312 TMADQEYFIRQKDGCTLDTDSERHKLTQCLIAAIERRVSHGLRLDIRTHNRMGLLSDLTR 371
Query: 357 IFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA-- 414
FRENGLS++ AE+ T G +AV FYV DASG + IE V+KEIG +I+ V
Sbjct: 372 AFRENGLSISSAEIGTNGDRAVGSFYVTDASGYEANPQVIEHVKKEIGGSIVVVNKSPGW 431
Query: 415 ---YSKSPP--------------QESGRFSLGNLFRSRSEKFLYNLGLIKS 448
SK+P ++ RFSLG+LF S+ E+ N I+S
Sbjct: 432 TPKTSKTPSVASISRTSSGSSIHEDKPRFSLGSLFWSQLERLSNNFSSIRS 482
>gi|168034813|ref|XP_001769906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678812|gb|EDQ65266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 291/438 (66%), Gaps = 10/438 (2%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E++ + ++PP+V +DN S + ATL+KV S NK G+LLE+VQ L D+DL I +AYI+SD
Sbjct: 13 EYDTMSSIIDPPKVMIDNDSEKNATLVKVSSQNKHGTLLEVVQELMDMDLTISKAYITSD 72
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF-----RSLRRSVGVQAALEHTT 127
G WFMDVFHVTDQ G K+ ++ + IQ++L + + + + RSVG Q EHT
Sbjct: 73 GGWFMDVFHVTDQKGLKIRDEKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQTISEHTA 132
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELTG DRPGLLSEV AVL+++ C V AEVWTHN R+A V+Y+T E T PI++ L
Sbjct: 133 IELTGTDRPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTDEDTLGPIENVRKLE 192
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK- 246
+I L +++G D++ A + V+ TH ERRLHQ+M AD D D + ++S +S + K
Sbjct: 193 RILEKLNPIMQGCDDEKVARSVVAESFTHVERRLHQLMLADHDSDPSVSQSQISSRKQKN 252
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P +TVE ++K Y+VV ++C DRPKLLFD VCTLTD++YVV HAT+ A QEY+IR
Sbjct: 253 PNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAVQEYHIR 312
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
+DG + A + +V CLEAAI+RR+SEG+ L LC DR GLL++VTR FRENGLSVT
Sbjct: 313 SMDGRTLDDPA-KAKVKRCLEAAIERRSSEGLRLYLCTTDRPGLLTEVTRTFRENGLSVT 371
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRF 426
RAEV+T+G +AVN FYV D +G PV + +E++RKE + A + ++ F
Sbjct: 372 RAEVSTQGDKAVNTFYVTDVNGLPVDLKKVEAIRKENPFLEVHAVPAASEGARVLDASPF 431
Query: 427 SLGNLFRSRSEKFLYNLG 444
S F SE+ L LG
Sbjct: 432 S---KFIKSSERLLQGLG 446
>gi|15239390|ref|NP_197914.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332006043|gb|AED93426.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 500
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/495 (42%), Positives = 306/495 (61%), Gaps = 57/495 (11%)
Query: 3 CWSSSFAVVDEFEKLVLRM-NPP-RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
CW +F+ L R+ PP RV +DN S + T++KV+S NK+G LLE+VQ+L D+
Sbjct: 5 CWP---YFDPDFDNLGERIYGPPCRVYIDNDSIQDCTVVKVNSENKQGLLLEVVQILTDM 61
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+LII ++YISSDG WFMDVFHV D++GNKL++ V I+ ++G R ++ S
Sbjct: 62 NLIITKSYISSDGGWFMDVFHVKDEHGNKLTDKSVINHIKHAIGTSRRESDFIKASEANN 121
Query: 121 AALE--------HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
+LE HT IE+TG DRPGL SE+FA +DL CNVM A W+HN+R+A + Y++
Sbjct: 122 NSLEPQLADHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVS 181
Query: 173 SEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVD----------------STH 216
+ T PIDDP LA I+ L V++ D S +T V +++
Sbjct: 182 DDNTHTPIDDPSRLASIEDHLSTVIRATADPASNSTHVGHKENETDGFLAGQGKGCMNSN 241
Query: 217 KERRLHQMMYADRDYDMNYAESGSASG------------RSKPLVTVESCTDKGYTVVNL 264
ERRLHQ+M + RD+D + E S S R +V++ +C ++GY++V +
Sbjct: 242 MERRLHQLMLSVRDFDEPFCEPSSLSLLSSKLEYCDHKERKTTIVSIGNCEERGYSIVTV 301
Query: 265 RCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVIN 324
+ DR +L+FD +CTL DMQYV++HA + ++ +A+QEY+IRH+DG +++E E++RVI
Sbjct: 302 KSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIK 361
Query: 325 CLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVV 384
CLEAAI+RR EG+ LELC E+R GLLSD+TR+ RENGL+V RA+V T+G +++N FYV
Sbjct: 362 CLEAAIERRVCEGVKLELCAENRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFYVR 421
Query: 385 DASGNPVKSETIESVRKEIGLTILRVKDD-------------AYSKSPPQ---ESGRFSL 428
D SGN + E +ESV+KE+ L VK++ A + + PQ + RFSL
Sbjct: 422 DISGNKIDMEFVESVKKEMRPIHLEVKNEDTKIDTVGSDEPTASASATPQRQPQPHRFSL 481
Query: 429 GNLFRSRSEKFLYNL 443
G++ RS+ E+ N
Sbjct: 482 GDILRSQMERLSLNF 496
>gi|168024574|ref|XP_001764811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684105|gb|EDQ70510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/435 (48%), Positives = 290/435 (66%), Gaps = 22/435 (5%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
++E +PPRVT++N ++ T+++V SA++ G LL +VQVL DLDL+I ++ + SD
Sbjct: 12 DYETASSSFDPPRVTIENDTSDNVTVVQVHSADRHGILLNVVQVLTDLDLVIVKSDMFSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS----LRRSVGVQAALEHTTI 128
WF DVFHV D +GNK+ + V + IQ SLG R R +S LRRS G+ + +HT +
Sbjct: 72 KGWFFDVFHVVDHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSSGLSVS-DHTVV 130
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
ELTG DRPGLLSE+ A+L+ L CNV AEVWTHN R+A V+Y+T TG PI L
Sbjct: 131 ELTGPDRPGLLSEISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGGPIQTQSRLEL 190
Query: 189 IKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
IK L VL+G D+ A + + + TH ERRLHQ+MY DR + + S S +
Sbjct: 191 IKEQLSKVLRGAHDENLARWKIEYATEITHVERRLHQLMYDDRRH---AGQDYSRSSEDR 247
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P + ++ ++GY++V+++C DRPKLLFD VCTLTDMQYV++HA + + + QE++IR
Sbjct: 248 PKIQIKR-NERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSHEADTTQEFFIR 306
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
H +G + + AE Q +I CLEAAI RRT++G+ LELC DR GLLS+VT+IFRENGLSV
Sbjct: 307 HENGCTLETPAE-QHLIVCLEAAINRRTTKGLRLELCMNDRVGLLSEVTKIFRENGLSVA 365
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQES--- 423
RA+V+TR +AVNVFYV+DASG PV + +E +RK IG IL+VK +PPQES
Sbjct: 366 RADVSTRDDKAVNVFYVLDASGRPVNMKVVEEMRKTIGHAILQVK-----GTPPQESELP 420
Query: 424 --GRFSLGNLFRSRS 436
G G L+R+ S
Sbjct: 421 NPGANFFGGLYRTFS 435
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/463 (47%), Positives = 304/463 (65%), Gaps = 40/463 (8%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKV---------DSANKRGSLLELVQVLNDLDL 62
+E+EKLV+RMN PRV +DN +T++KV DSA G LLE VQ+L D++L
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKVFTLTQPSSIDSARSPGILLESVQLLTDMNL 67
Query: 63 IIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAA 122
I++AYISSDG+W MDVFHV+D NG+KL+++++ I++S+ + G+
Sbjct: 68 WIKKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSI--ETSHYCKTEGYTGL--- 122
Query: 123 LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID- 181
T +ELTG DR GLLSEVFAVL+DL+C+V+ A+ WTHN R+AS++Y+ +G PID
Sbjct: 123 ---TALELTGTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDG 179
Query: 182 DPDTLAKIKRLLLYVLKGDRD-KRSANTAVSVD-STHKERRLHQMMYADRDYDMNYAESG 239
D D + +++ L +LK D + T VS +TH ERRLHQ M+ DRDY+ +
Sbjct: 180 DSDRVQRVEGQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEK 239
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
S P+V+V++ +GY+VVNL+C DR KLLFD VCTLTDM Y+V+HA + A
Sbjct: 240 S------PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETA 293
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFR 359
+ E+Y+RH DG+P+SSE ERQR+I CL+AAI+RRT +G+ LELC DR GLL++VTRI R
Sbjct: 294 FLEFYVRHSDGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILR 353
Query: 360 ENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKD------- 412
ENGL++ RAE++T+ S A NVFYV DA+GN + E I+S+R++IG+ L VK+
Sbjct: 354 ENGLNIARAEISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVKEPFPISCR 413
Query: 413 DAYSK----SPPQESGRFSLGNLFRSRSE---KFLYNLGLIKS 448
+A K P GR+ G + S + LY+LGLIKS
Sbjct: 414 EAVEKEQHIEPQDHQGRYGGGTVLVSLGSLVMRNLYHLGLIKS 456
>gi|414869679|tpg|DAA48236.1| TPA: ACR4 [Zea mays]
Length = 453
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/459 (48%), Positives = 291/459 (63%), Gaps = 43/459 (9%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDG 73
+ KLV RMNPPRV +DN S AT+I+VD NK G LLE VQVL DL+L+I +AYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 74 EWFMDVFHVTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRSVGVQAAL---E 124
WFM VF+VTDQ+G+KL +V + IQ+ L P A + AL +
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGY-----------ALPEDQ 124
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T+IELTG DRPGLLSEV AVL+ L CN++ AEVWTH+ R A+V+ +T EATG + D
Sbjct: 125 FTSIELTGADRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAG 184
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMY------ADRDYDMNYAES 238
L++++ LL V++GD T +S ERRLH +M + ES
Sbjct: 185 RLSRVQELLRDVMRGDGTCNRGGTGISA-----ERRLHTLMLDSVGGGGAEEAGGGRDES 239
Query: 239 GSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP- 297
G G ++P V V C ++ YTVV LRC DRPKLLFD +C L D+QYVV+H TV AE
Sbjct: 240 GGC-GVARPKVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGAS 298
Query: 298 ---EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDV 354
EAYQEYYIRHVDG+P+ S+AER R++ CLEAA++RR S G+ LE+ EDR GLLS++
Sbjct: 299 KDKEAYQEYYIRHVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEI 358
Query: 355 TRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK--- 411
TR+FREN LS+ RA +TTR +A + FYV DA GNPV T+++V +++G +LRVK
Sbjct: 359 TRVFRENSLSIIRAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGG 418
Query: 412 DDAYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
DA K + LG+L +S + L LI+S S
Sbjct: 419 HDAPVKHEAEGGAVSVLGSLLKSSFQ----GLRLIRSYS 453
>gi|242082075|ref|XP_002445806.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
gi|241942156|gb|EES15301.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
Length = 461
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/458 (49%), Positives = 289/458 (63%), Gaps = 33/458 (7%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDG 73
+ KLV RMNPPRV +DN + AT+I+VD K G LLE VQVL DL+L+I +AYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDACDNATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 74 EWFMDVFHVTDQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHT 126
WFMDVF+VTDQ+G+KL +V + IQ+ L P F V + T
Sbjct: 76 NWFMDVFNVTDQDGSKLQNREVIDHIQKCLESDGYLPPPANGGF--------VPPEDQFT 127
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTL 186
+IELTG DRPGLLSEV AVL+ L CN++ AEVWTH+ R A+V+ IT EATGL I D L
Sbjct: 128 SIELTGADRPGLLSEVCAVLAALSCNIVKAEVWTHDRRAAAVIQITDEATGLAIHDVGRL 187
Query: 187 AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADR------DYDMNYAESGS 240
++ + LL +++ D T VSV + ERRLH+MM DR G
Sbjct: 188 SRAQELLSNLMQSDGRCNRGATGVSVGTARTERRLHKMMLDDRVGGGEEAVGGGEERGGC 247
Query: 241 ASGRSKPL-VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE--SP 297
R K V V CT++ YTVV LRC DRPKLLFD +C L D+QYVV+H TV AE S
Sbjct: 248 GKARHKAAKVVVMDCTERQYTVVILRCRDRPKLLFDTLCALNDLQYVVFHGTVDAEGASK 307
Query: 298 EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCC--EDRAGLLSDVT 355
EAYQEYYIRHVDG+P+ ++AER R++ CLEAA++RR S G+ LEL EDR GLLS++T
Sbjct: 308 EAYQEYYIRHVDGHPVRADAERTRLVRCLEAAVERRASNGLELELEVRTEDRVGLLSEIT 367
Query: 356 RIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAY 415
R+FREN LS+ RA +TT+ +A + FYV D GNPV TI++V +++G +LRVK +
Sbjct: 368 RVFRENSLSIIRAAITTKDGKAEDTFYVSDTYGNPVDGRTIDAVGEQLGHAVLRVKRRGH 427
Query: 416 SKSPPQES--GRFS-LGNLFRSRSEKFLYNLGLIKSCS 450
S E+ G S LG+L + L LI+S S
Sbjct: 428 DASVKHEAEGGAVSVLGSLLKGS----FQGLRLIRSYS 461
>gi|343173131|gb|AEL99268.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/238 (81%), Positives = 211/238 (88%), Gaps = 4/238 (1%)
Query: 216 HKERRLHQMMYADRDYD---MNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKL 272
H ERRLHQMMYADRDYD +N +S + R+ PLVTVE+C++KGYT VNLRC DRPKL
Sbjct: 1 HTERRLHQMMYADRDYDVTNLNCNDSSAYPPRT-PLVTVENCSEKGYTAVNLRCADRPKL 59
Query: 273 LFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR 332
LFDAVCTLTDMQYVVYHATVIAE PEAYQEY+IRH+DG PISSEAERQR+I+CLEAAIKR
Sbjct: 60 LFDAVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKR 119
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
RTSEGI LELC EDR GLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV+D+SG PVK
Sbjct: 120 RTSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVK 179
Query: 393 SETIESVRKEIGLTILRVKDDAYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
SETIE+VR EIG TIL VK D YSKSPPQESG FSLG LF+SRSEKFLY+LGL+KS S
Sbjct: 180 SETIEAVRNEIGKTILHVKQDDYSKSPPQESGGFSLGTLFKSRSEKFLYHLGLVKSYS 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 23 PPR---VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDV 79
PPR VTV+N S + T + + A++ L + V L D+ ++ A + ++G
Sbjct: 30 PPRTPLVTVENCSEKGYTAVNLRCADRPKLLFDAVCTLTDMQYVVYHATVIAEGPEAYQE 89
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLL 139
+ + +G +S + +R+ L + R S G++ +EL DR GLL
Sbjct: 90 YFIRHIDGCPISSEAERQRLIHCLEAAIKR----RTSEGIR-------LELCSEDRVGLL 138
Query: 140 SEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA---KIKRLLLYV 196
S+V + + +V AEV T S+ +V Y+ +++G P+ A +I + +L+V
Sbjct: 139 SDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVI-DSSGYPVKSETIEAVRNEIGKTILHV 197
Query: 197 LKGDRDK 203
+ D K
Sbjct: 198 KQDDYSK 204
>gi|218200397|gb|EEC82824.1| hypothetical protein OsI_27619 [Oryza sativa Indica Group]
Length = 433
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/440 (49%), Positives = 288/440 (65%), Gaps = 32/440 (7%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN ATL++VDSA K G LLE VQVL DLDL I +AYIS
Sbjct: 4 LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYIS 63
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH-TTIE 129
SDG WFMDVFHVTD+ G KL++D V I+QSLG R AALE T +E
Sbjct: 64 SDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARP--------AALEGLTALE 115
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189
LTG DR GL+SEVFAVL+D+ C V+ A WTH R+ +V++ E D + +A+I
Sbjct: 116 LTGADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARI 170
Query: 190 KRLLLYVLKGD--RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
+ L ++L+GD + + H ERRLHQ+M ADRD + A + +AS P
Sbjct: 171 EARLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAAS--PTP 228
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
V+V+S ++GY+VV ++C DRPKLLFD VCTLTDM YVV+H T+ +A+QE+YIRH
Sbjct: 229 AVSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRH 288
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
DG+PISSEAER RV CL+ AI+RR+ EG+ LELC DR LLSDVTR FRENGL V +
Sbjct: 289 ADGSPISSEAERHRVSQCLQYAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQ 348
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA----YSKSPPQES 423
AEV+T+G A NVFYV DA+G+ V+ I++VR+ +G+ L +++ Y K+ P+++
Sbjct: 349 AEVSTKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDA 408
Query: 424 ----------GRFSLGNLFR 433
G F LGN +
Sbjct: 409 VDGNGGGGGIGLFYLGNFVK 428
>gi|222639814|gb|EEE67946.1| hypothetical protein OsJ_25838 [Oryza sativa Japonica Group]
Length = 433
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/440 (49%), Positives = 288/440 (65%), Gaps = 32/440 (7%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN ATL++VDSA K G LLE VQVL DLDL I +AYIS
Sbjct: 4 LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYIS 63
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH-TTIE 129
SDG WFMDVFHVTD+ G KL++D V I+QSLG R AALE T +E
Sbjct: 64 SDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARP--------AALEGLTALE 115
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189
LTG DR GL+SEVFAVL+D+ C V+ A WTH R+ +V++ E D + +A+I
Sbjct: 116 LTGADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARI 170
Query: 190 KRLLLYVLKGD--RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
+ L ++L+GD + + H ERRLHQ+M ADRD + A + +AS P
Sbjct: 171 EARLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAAS--PTP 228
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
V+V+S ++GY+VV ++C DRPKLLFD VCTLTDM YVV+H T+ +A+QE+YIRH
Sbjct: 229 AVSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRH 288
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
DG+PISSEAER RV CL+ AI+RR+ EG+ LELC DR LLSDVTR FRENGL V +
Sbjct: 289 ADGSPISSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQ 348
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA----YSKSPPQES 423
AEV+T+G A NVFYV DA+G+ V+ I++VR+ +G+ L +++ Y K+ P+++
Sbjct: 349 AEVSTKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDA 408
Query: 424 ----------GRFSLGNLFR 433
G F LGN +
Sbjct: 409 VDGNGGGGGIGLFYLGNFVK 428
>gi|255548868|ref|XP_002515490.1| amino acid binding protein, putative [Ricinus communis]
gi|223545434|gb|EEF46939.1| amino acid binding protein, putative [Ricinus communis]
Length = 478
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/467 (44%), Positives = 300/467 (64%), Gaps = 32/467 (6%)
Query: 13 EFEKLVLRMNPP--RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+F++L R+ P RV +DN S +++KVDS NK+G LLE+VQVL DL+L I ++YIS
Sbjct: 12 DFDRLPERIYGPTCRVCIDNESMEDCSVVKVDSVNKQGLLLEVVQVLTDLNLTISKSYIS 71
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGP--RARSFRSLRRSVG----VQAALE 124
SD WFMDVFHV D+ G KL++ V + I Q++G +S + + V + + E
Sbjct: 72 SDAGWFMDVFHVKDERGKKLTDQHVIDYIHQAIGTTRETQSPATPKSYVNDVFEGEHSSE 131
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT IE++G DRPGL SE+ A L DL CN++ A W+HN+R+A V YI+ ++T PIDDP
Sbjct: 132 HTAIEMSGTDRPGLFSEISAALVDLHCNIVEAHAWSHNARLACVAYISDQSTDTPIDDPH 191
Query: 185 TLAKIKRLLLYVLKG-------DRDKRSANTAVSVDSTHKERRLHQMMYADRDYD----M 233
LA I+ L V++ K T+ ERRLHQ+M + RD+D
Sbjct: 192 RLATIEDHLTTVIRATGPQPNSQEVKTGGVVGGEGTVTNVERRLHQLMLSARDFDGPLGS 251
Query: 234 NYAESGSASGRS------------KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLT 281
+ SG SGR K +V++++C +KGY++V++ C DRP+L+FD VCTLT
Sbjct: 252 SITGSGPRSGRGSGSGLDNEDEGRKTVVSIDNCEEKGYSIVSIECKDRPRLMFDTVCTLT 311
Query: 282 DMQYVVYHATVIA-ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISL 340
DMQYV++HA++ A + A+QEY+IR++DG +++E+E++RVI CLEAAI+RR EG+ +
Sbjct: 312 DMQYVIFHASIGAGDDGYAFQEYFIRYIDGYALNTESEKERVIKCLEAAIERRVCEGVKV 371
Query: 341 ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVR 400
ELC E+R GLLSD+TR+ RENGL+V RA+V T+G +AVN FYV D SGN V ++S++
Sbjct: 372 ELCAENRVGLLSDITRVLRENGLTVVRADVATQGEKAVNAFYVRDISGNEVDMGFVKSMK 431
Query: 401 KEIGLTILRVKDDAYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIK 447
KE+G L VK D + RFS+G++ +S+ +F +N IK
Sbjct: 432 KEMGAINLEVKKDISRPISRDQRARFSIGDMLKSQIGRFSHNFIQIK 478
>gi|297812735|ref|XP_002874251.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320088|gb|EFH50510.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/497 (42%), Positives = 305/497 (61%), Gaps = 59/497 (11%)
Query: 3 CWSSSFAVVDEFEKLVLRM-NPP-RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
CW +F+ L R+ PP RV +DN S T++KV+S NK+G LLE+VQ+L D+
Sbjct: 5 CWP---YFDPDFDNLGERIYGPPCRVYIDNDSIIDCTVVKVNSENKQGLLLEVVQILTDM 61
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVG-- 118
+LII ++YISSDG WFMDVFHV D+ GNKL++ V I+ ++G R ++ S
Sbjct: 62 NLIITKSYISSDGGWFMDVFHVKDEYGNKLTDKSVINHIKHAIGTSRRESDFIKASEAHN 121
Query: 119 ------VQAAL----EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASV 168
+++ L EHT IE+TG DRPGL SE+FA +DL CNVM A W+HN+R+A +
Sbjct: 122 NPNNNSLESPLSDHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACI 181
Query: 169 VYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVD--------------- 213
Y++ + T PIDDP LA I+ L V++ D S +T V
Sbjct: 182 AYVSDDNTHTPIDDPSRLASIEDHLSTVIRATSDPASNSTHVGHKENETDGFLAGQGKGC 241
Query: 214 -STHKERRLHQMMYADRDYDMNYAESGSASG------------RSKPLVTVESCTDKGYT 260
+++ ERRLHQ+M + RD+D + E S S R +V++ +C ++GY+
Sbjct: 242 MNSNVERRLHQLMLSVRDFDEPFCEPSSLSLLSSKLEYCDQKERKTTIVSIGNCEERGYS 301
Query: 261 VVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQ 320
+V ++ DR +L+FD +CTL DMQYV++HA + ++ +A+QEY+IRH+DG +++E E++
Sbjct: 302 IVTVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKE 361
Query: 321 RVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNV 380
RVI CLEAAI+RR EG+ LELC E+R GLLSD+TR+ RENGL+V RA+V T+G +++N
Sbjct: 362 RVIKCLEAAIERRVCEGVKLELCAENRVGLLSDITRVLRENGLTVVRADVETQGQKSLNA 421
Query: 381 FYVVDASGNPVKSETIESVRKEIGLTILRVK-----------DDAYSKSPPQ---ESGRF 426
FYV D SGN + E +ESV+KE+ L VK DD + + PQ + RF
Sbjct: 422 FYVRDISGNKIDMEFVESVKKEMRPIHLEVKNEDTTTDIVGSDDPPASAAPQPQPQPHRF 481
Query: 427 SLGNLFRSRSEKFLYNL 443
SLG++ RS+ E+ N
Sbjct: 482 SLGDILRSQIERLSLNF 498
>gi|226501350|ref|NP_001147811.1| ACR4 [Zea mays]
gi|195613876|gb|ACG28768.1| ACR4 [Zea mays]
Length = 453
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/458 (48%), Positives = 289/458 (63%), Gaps = 41/458 (8%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDG 73
+ KLV RMNPPRV +DN S AT+I+VD NK G LLE VQVL DL+L+I +AYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 74 EWFMDVFHVTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRSVGVQAAL---E 124
WFM VF+VTDQ+G+KL +V + IQ+ L P A + AL +
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGY-----------ALPEDQ 124
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T+IELTG DRPGLLSEV AVL+ L CN++ AEVWTH+ R A+V+ +T EATG + D
Sbjct: 125 FTSIELTGADRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAG 184
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMY-----ADRDYDMNYAESG 239
L++++ LL V++GD T +S ERRLH +M + +
Sbjct: 185 RLSRVQELLRDVMRGDGTCNHGGTGISA-----ERRLHTLMLDSVGGGGAEEAGGGGDES 239
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP-- 297
G ++P V V C ++ YTVV LRC DRPKLLFD +C L D+QYVV+H TV AE
Sbjct: 240 GGCGVARPKVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASK 299
Query: 298 --EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVT 355
EAYQEYYIRHVDG+P+ S+AER R++ CLEAA++RR S G+ LE+ EDR GLLS++T
Sbjct: 300 DKEAYQEYYIRHVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEIT 359
Query: 356 RIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK---D 412
R+FREN LS+ RA +TTR +A + FYV DA GNPV T+++V +++G +LRVK
Sbjct: 360 RVFRENSLSIIRAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGH 419
Query: 413 DAYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
DA K + LG+L +S + L LI+S S
Sbjct: 420 DAPVKHEAEGGAVSVLGSLLKSSFQ----GLRLIRSYS 453
>gi|343173133|gb|AEL99269.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/238 (81%), Positives = 211/238 (88%), Gaps = 4/238 (1%)
Query: 216 HKERRLHQMMYADRDYDM---NYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKL 272
H ERRLHQ+MYADRDYD+ N +S + R+ PLVTVE+C++KGYT VNLRC DRPKL
Sbjct: 1 HTERRLHQIMYADRDYDVTNPNCNDSSAYPPRT-PLVTVENCSEKGYTAVNLRCADRPKL 59
Query: 273 LFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR 332
LFDAVCTLTDMQYVVYHATVIAE PEAYQEY+IRH+DG PISSEAERQR+I+CLEAAIKR
Sbjct: 60 LFDAVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKR 119
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
RTSEGI LELC EDR GLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV+D+SG PVK
Sbjct: 120 RTSEGIRLELCSEDRIGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVK 179
Query: 393 SETIESVRKEIGLTILRVKDDAYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
SETIE+VR EIG TIL VK D YSKSPPQESG FSLG LF+SRSEKFLY+LGL+KS S
Sbjct: 180 SETIEAVRNEIGKTILHVKQDDYSKSPPQESGGFSLGTLFKSRSEKFLYHLGLVKSYS 237
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 23 PPR---VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDV 79
PPR VTV+N S + T + + A++ L + V L D+ ++ A + ++G
Sbjct: 30 PPRTPLVTVENCSEKGYTAVNLRCADRPKLLFDAVCTLTDMQYVVYHATVIAEGPEAYQE 89
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLL 139
+ + +G +S + +R+ L + R S G++ +EL DR GLL
Sbjct: 90 YFIRHIDGCPISSEAERQRLIHCLEAAIKR----RTSEGIR-------LELCSEDRIGLL 138
Query: 140 SEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA---KIKRLLLYV 196
S+V + + +V AEV T S+ +V Y+ +++G P+ A +I + +L+V
Sbjct: 139 SDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVI-DSSGYPVKSETIEAVRNEIGKTILHV 197
Query: 197 LKGDRDK 203
+ D K
Sbjct: 198 KQDDYSK 204
>gi|449508537|ref|XP_004163340.1| PREDICTED: uncharacterized protein LOC101229243 [Cucumis sativus]
Length = 476
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/472 (45%), Positives = 293/472 (62%), Gaps = 27/472 (5%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
+ + V + E L+ R+ PPRV +DN + + TL+KVDSANK G LLE+VQVL DLDL+
Sbjct: 5 YHQPYFVDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLV 64
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGP--RARSFRSLRRSVGVQA 121
I ++YISSDG WFMDVFHVTDQ GNKL+++ + I+Q+L + S R +R +
Sbjct: 65 ISKSYISSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKE 124
Query: 122 AL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
L EHT E+TG DRPGLLSE+FAVL +L CNV A WTH+ + AS++YI G
Sbjct: 125 LLSPEHTAAEITGIDRPGLLSEIFAVLVELGCNVTAAVAWTHHKKAASIIYIEEGWNGGM 184
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSAN----TAVSVDSTHKERRLHQMMYADRDYDMNY 235
I D LA ++ L V+ + + TA S TH ERRLHQ+MYA+ DY+
Sbjct: 185 IKDSKRLAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCR 244
Query: 236 AESGSASGR---SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV 292
S S + ++ V +ESC +KGY+++N+R DRPKLLFD VC LTD+QYVV+HA V
Sbjct: 245 CHDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAV 304
Query: 293 IAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLS 352
+ AYQEY+IR G + SE+ER+R++ L AAI+RR S G+ LELC +R GLLS
Sbjct: 305 SSNGTVAYQEYFIRQKGGCILDSESERKRLLQALVAAIERRVSHGLRLELCALNRVGLLS 364
Query: 353 DVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN--PVKSETIESVRKEIGLTILRV 410
D+TR+FRENG S++ +V T G +A+ ++ DASG+ V ++ V KEIG +I V
Sbjct: 365 DITRVFRENGFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIGGSIAVV 424
Query: 411 K-----DDAYSKSPP---------QESGRFSLGNLFRSRSEKFLYNLGLIKS 448
+ DD S S ++ RFSLGNL S+ E+ N G IKS
Sbjct: 425 QGPSKWDDRTSSSRANHGTKVARVEDKPRFSLGNLLWSQLERLSTNFGSIKS 476
>gi|449451315|ref|XP_004143407.1| PREDICTED: uncharacterized protein LOC101215529 [Cucumis sativus]
Length = 476
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/472 (45%), Positives = 292/472 (61%), Gaps = 27/472 (5%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
+ + V + E L+ R+ PPRV +DN + + TL+KVDSANK G LLE+VQVL DLDL+
Sbjct: 5 YHQPYFVDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLV 64
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGP--RARSFRSLRRSVGVQA 121
I ++YISSDG WFMDVFHVTDQ GNKL+++ + I+Q+L + S R +R +
Sbjct: 65 ISKSYISSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKE 124
Query: 122 AL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
L EHT E+TG DRPGLLSE+FAVL +L CN+ A WTH+ + AS++YI G
Sbjct: 125 LLSPEHTAAEITGIDRPGLLSEIFAVLVELGCNITAAVAWTHHKKAASIIYIEEGWNGGM 184
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSAN----TAVSVDSTHKERRLHQMMYADRDYDMNY 235
I D LA ++ L V+ + + TA S TH ERRLHQ+MYA+ DY+
Sbjct: 185 IKDSKRLAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCR 244
Query: 236 AESGSASGR---SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV 292
S S + ++ V +ESC +KGY+++N+R DRPKLLFD VC LTD+QYVV+HA V
Sbjct: 245 CHDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAV 304
Query: 293 IAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLS 352
+ AYQEY+IR G + SE ER+R++ L AAI+RR S G+ LELC +R GLLS
Sbjct: 305 SSNGTVAYQEYFIRQKGGCILDSECERKRLLQALVAAIERRVSHGLRLELCALNRVGLLS 364
Query: 353 DVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN--PVKSETIESVRKEIGLTILRV 410
D+TR+FRENG S++ +V T G +A+ ++ DASG+ V ++ V KEIG +I V
Sbjct: 365 DITRVFRENGFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIGGSIAVV 424
Query: 411 K-----DDAYSKSPP---------QESGRFSLGNLFRSRSEKFLYNLGLIKS 448
+ DD S S ++ RFSLGNL S+ E+ N G IKS
Sbjct: 425 QGPSKWDDRTSSSRANHGTKVARVEDKPRFSLGNLLWSQLERLSTNFGSIKS 476
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/474 (44%), Positives = 301/474 (63%), Gaps = 46/474 (9%)
Query: 13 EFEKLVLRMNPP--RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+F+ L R+ P RV +DN S T++KVDS NK+G LLE+VQVL DL+L I + YIS
Sbjct: 1750 DFDSLPERIFGPTCRVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKGYIS 1809
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLG---------PRARSFRSLRRSVGVQA 121
SD WFMDVFHV D++G KL + +V IQQ++G P AR++ +
Sbjct: 1810 SDAGWFMDVFHVKDEHGKKLRDQNVINYIQQAIGTTRESTPSPPNARAYTN--NIFEADH 1867
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ EHT IE++G DRPGL SE+ A L+DL+CN++ W+HN+R+A V YI+ ++ PI+
Sbjct: 1868 SSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIE 1927
Query: 182 DPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS---------------THKERRLHQMMY 226
DP LA I+ L VL+ + RSA +++ ++ ERRLHQ+M
Sbjct: 1928 DPHRLASIEDHLTTVLRANT-VRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLML 1986
Query: 227 ADRDYDMNYAESGSASG------RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTL 280
+ RD+D + S + +G SK +V++E+C K Y++VN+ C DR +L+FD +CTL
Sbjct: 1987 SVRDFDGPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTL 2046
Query: 281 TDMQYVVYHATVIAESP-EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS 339
DMQYV++HA+V ++ A+QEY+IRH DG ++E+E++RVI CLEAAI+RR SEG+
Sbjct: 2047 NDMQYVIFHASVSSDHDGRAFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSEGVL 2106
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
L+L E+R GLLSD+TR+ RENGL+V RA+V T G +AVN FYV D SGN V I+S+
Sbjct: 2107 LKLRAENRLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVDMGFIKSM 2166
Query: 400 RKEIGLTILRV-KDD---------AYSKSPPQESGRFSLGNLFRSRSEKFLYNL 443
+KE+GLT L V K+D + P E RFS G+L +S+ E+F +N
Sbjct: 2167 KKEMGLTDLEVIKNDTSPTTSPTRTITNISPHERHRFSFGDLLKSQIERFSHNF 2220
>gi|356554239|ref|XP_003545456.1| PREDICTED: uncharacterized protein LOC100820595 [Glycine max]
Length = 483
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/476 (44%), Positives = 296/476 (62%), Gaps = 47/476 (9%)
Query: 13 EFEKLVLRMNPP--RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
EF+ L R++ P RV VDN S T++KVDS NK+G LLE+VQ+L D++L I +++IS
Sbjct: 12 EFDTLPERIHGPPCRVCVDNESMEGCTVVKVDSVNKQGLLLEVVQILTDMNLQICKSFIS 71
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARS----------------FRSLR 114
SD WFMDVFHV D+NGNKL++ V IQQ++G R+R+ F ++
Sbjct: 72 SDAGWFMDVFHVRDENGNKLTDQKVINDIQQAIG-RSRASSPSQQHSNNNNNNSVFTTMT 130
Query: 115 RSVGVQAAL---------EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRM 165
L +HT IE+TG DRPGL SE+ A L+DL CN++ A W+HN+R+
Sbjct: 131 NYKTYSKRLLPLLPNPNDQHTAIEMTGADRPGLFSEISAALADLHCNIVEAHAWSHNARL 190
Query: 166 ASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVD------------ 213
A V YI+ ++T IDDP LA I+ L VL+ + A D
Sbjct: 191 ACVAYISDQSTDTAIDDPSRLASIEDHLTTVLRATTNPNGGGGANHPDVKTSELLGGEGQ 250
Query: 214 STHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLL 273
T ERRLHQ+M + RD++ + GR K +V+VESC KGY++V++ C DRP+L+
Sbjct: 251 MTTVERRLHQLMLSVRDFE-TPSSPKEKKGR-KRMVSVESCEQKGYSIVSIECKDRPRLM 308
Query: 274 FDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRR 333
FD VCTLTDMQYV++HA++ + + A QEY+IRHVDG + + +E++RV+ CLEAAI+RR
Sbjct: 309 FDTVCTLTDMQYVIFHASITSHAGYACQEYFIRHVDGCALDTASEKERVMKCLEAAIERR 368
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
EGI LELC ++R GLLSD+TR+ RENGL V RA+V T G ++VN FYV D SGN V
Sbjct: 369 VCEGIRLELCADNRVGLLSDITRVLRENGLVVVRADVETHGEKSVNAFYVRDISGNEVDI 428
Query: 394 ETI-ESVRKEIG-LTILRVKDDAYSKSP--PQESGRFSLGNLFRSRSEKFLYNLGL 445
E SV+KE+G + L VK+D + P P+++ S G + RSR E+F + L
Sbjct: 429 EYFSNSVKKEMGPIATLHVKNDTNRRKPNSPKQAP-LSFGGMLRSRIERFSHGFIL 483
>gi|125539879|gb|EAY86274.1| hypothetical protein OsI_07644 [Oryza sativa Indica Group]
Length = 608
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/456 (48%), Positives = 286/456 (62%), Gaps = 49/456 (10%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
RV +DN++ TL+KVDS NK G LLE+VQVL+DLDL I +AYI+SDG WFMDVFHV D
Sbjct: 149 RVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWFMDVFHVVD 208
Query: 85 QNGNKLSEDDVSERIQQSLGP------RARSFRSLRRSVGVQAALEHTTIELTGRDRPGL 138
+ G K++++ + I+++LGP A+ S RSVG+ + +HT IEL G DR GL
Sbjct: 209 KQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIELKGPDRTGL 268
Query: 139 LSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
LSEVFAVL++L CNV+ AEVWTH +R+A VVY+ A+G + DP L++I+ L VL+
Sbjct: 269 LSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIEHRLRLVLR 328
Query: 199 GDRDKRSA------------NTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA----- 241
G ++ + +TH +RRLHQ+M+AD D D + A
Sbjct: 329 GHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLDSRAIVSGE 388
Query: 242 -----SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAES 296
+ +P+VTVE C +K Y+VVN++C DR KLLFD VCTLTDM YVV HA+V ++
Sbjct: 389 AGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDG 448
Query: 297 PEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTR 356
QE YIR DG + + E RVI CLEAAI RR SEG +LELC DR GLLSDVTR
Sbjct: 449 IYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRVGLLSDVTR 507
Query: 357 IFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTI-LRVKD--- 412
+ RE+GL+VTRA+VTT G QA+NVFYV DASG PV +TIE +R ++G T+ L VK
Sbjct: 508 VLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVMLNVKKVPS 567
Query: 413 ---------DAYSKSPPQESGR-------FSLGNLF 432
A KSP Q + FS GNLF
Sbjct: 568 SPSSSSSAAAANGKSPGQPASGALSRTSFFSFGNLF 603
>gi|125582506|gb|EAZ23437.1| hypothetical protein OsJ_07127 [Oryza sativa Japonica Group]
Length = 610
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/458 (48%), Positives = 286/458 (62%), Gaps = 51/458 (11%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
RV +DN++ TL+KVDS NK G LLE+VQVL+DLDL I +AYI+SDG WFMDVFHV D
Sbjct: 149 RVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWFMDVFHVVD 208
Query: 85 QNGNKLSEDDVSERIQQSLGP------RARSFRSLRRSVGVQAALEHTTIELTGRDRPGL 138
+ G K++++ + I+++LGP A+ S RSVG+ + +HT IEL G DR GL
Sbjct: 209 KQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIELKGPDRTGL 268
Query: 139 LSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
LSEVFAVL++L CNV+ AEVWTH +R+A VVY+ A+G + DP L++I+ L VL+
Sbjct: 269 LSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIEHRLRLVLR 328
Query: 199 GDRDKRSA------------NTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA----- 241
G ++ + +TH +RRLHQ+M+AD D D + A
Sbjct: 329 GHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLDSRAIVSGE 388
Query: 242 -----SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAES 296
+ +P+VTVE C +K Y+VVN++C DR KLLFD VCTLTDM YVV HA+V ++
Sbjct: 389 AGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDG 448
Query: 297 PEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTR 356
QE YIR DG + + E RVI CLEAAI RR SEG +LELC DR GLLSDVTR
Sbjct: 449 IYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRVGLLSDVTR 507
Query: 357 IFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTI-LRVKD--- 412
+ RE+GL+VTRA+VTT G QA+NVFYV DASG PV +TIE +R ++G T+ L VK
Sbjct: 508 VLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVMLNVKKVPS 567
Query: 413 -----------DAYSKSPPQESGR-------FSLGNLF 432
A KSP Q + FS GNLF
Sbjct: 568 SPSSSSAAAAAAANGKSPGQPASGALSRTSFFSFGNLF 605
>gi|359476144|ref|XP_003631797.1| PREDICTED: uncharacterized protein LOC100852414 [Vitis vinifera]
Length = 481
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/470 (44%), Positives = 293/470 (62%), Gaps = 34/470 (7%)
Query: 13 EFEKLVLRMNPP--RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
EF++L R+ P RV +DN S TL+KV+S NK+G LLE+V+VL D++L I ++YIS
Sbjct: 12 EFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKSYIS 71
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPR---ARSFRSLRRSVGVQAALEHTT 127
SD WFM VFHV D++GNKL++ V IQQ++G S + + + A EHT
Sbjct: 72 SDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTA 131
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IE++G DRPGL SE+ A L+DL+ N++ A WTHN R+A V YIT ++T I+DP LA
Sbjct: 132 IEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPHRLA 191
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDSTH--------KERRLHQMMYADRDYDMNYAESG 239
KI+ L VL R+ + V H ERRLHQ+M + D++ A +
Sbjct: 192 KIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSAPTT 251
Query: 240 SASGR-----------SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY 288
S+S SK +V++ESC ++GY++V++ C DR +L+FD VCT+TDMQY+++
Sbjct: 252 SSSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLIF 311
Query: 289 HATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRA 348
H + + A QEY+IRH+DG ++SE E++ V+ CLEAAI+RR EG+ LELC +R
Sbjct: 312 HGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCANNRL 371
Query: 349 GLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE---------TIESV 399
GLLSD+TR+ RENGL+V RA+V T+G +AVN FYV D SGN V +E IESV
Sbjct: 372 GLLSDITRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFIESV 431
Query: 400 RKEIGLTILRVKDD-AYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKS 448
+KE+G L VK + S S P RFS+ ++ +S ++ N IK+
Sbjct: 432 KKEMGPIDLAVKKEITSSPSSPDHRPRFSVADMVKSHVDRLSNNFIPIKN 481
>gi|296082058|emb|CBI21063.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/470 (44%), Positives = 292/470 (62%), Gaps = 34/470 (7%)
Query: 13 EFEKLVLRMNPP--RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
EF++L R+ P RV +DN S TL+KV+S NK+G LLE+V+VL D++L I ++YIS
Sbjct: 15 EFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKSYIS 74
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPR---ARSFRSLRRSVGVQAALEHTT 127
SD WFM VFHV D++GNKL++ V IQQ++G S + + + A EHT
Sbjct: 75 SDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTA 134
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IE++G DRPGL SE+ A L+DL+ N++ A WTHN R+A V YIT ++T I+DP LA
Sbjct: 135 IEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPHRLA 194
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDSTH--------KERRLHQMMYADRDYDMNYAESG 239
KI+ L VL R+ + V H ERRLHQ+M + D++ A +
Sbjct: 195 KIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSAPTT 254
Query: 240 SASGR-----------SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY 288
S+S SK +V++ESC ++GY++V++ C DR +L+FD VCT+TDMQY+++
Sbjct: 255 SSSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLIF 314
Query: 289 HATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRA 348
H + + A QEY+IRH+DG ++SE E++ V+ CLEAAI+RR EG+ LELC +R
Sbjct: 315 HGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCANNRL 374
Query: 349 GLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE---------TIESV 399
GLLSD+TR+ RENGL+V RA+V T+G +AVN FYV D SGN V +E IESV
Sbjct: 375 GLLSDITRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFIESV 434
Query: 400 RKEIGLTILRVKDD-AYSKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKS 448
+KE+G L VK + S S P RFS+ ++ +S N+ L +S
Sbjct: 435 KKEMGPIDLAVKKEITSSPSSPDHRPRFSVADMVKSHVVNMKNNIILEQS 484
>gi|413921426|gb|AFW61358.1| ACR8 [Zea mays]
Length = 432
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/454 (49%), Positives = 280/454 (61%), Gaps = 39/454 (8%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN ATL++VDSA KRG LLE VQVL DLDL I +AYIS
Sbjct: 4 LDEYEKLVVRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYIS 63
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH-TTIE 129
SDG WFMDVFHVTD+ G KL++D V IQQSLG R AALE T +E
Sbjct: 64 SDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNEPARP--------AALEGLTALE 115
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189
LTG DR GLLSEVFAVL+DL+C V+ A WTH R+A V ++ E D D +A+I
Sbjct: 116 LTGPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEG------DADRVARI 169
Query: 190 KRLLLYVLKGDRDKRSANTAVSVDST-HKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
L ++++GD + A AV + H +RRLHQ+M AD + SA+
Sbjct: 170 LARLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHQLMAADHN--------NSATPYPAAA 221
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV-IAESPEAYQEYYIRH 307
V+V+S ++GY+VV ++C DRPKLLFD VC L + YVV+H TV A A QE+YI
Sbjct: 222 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRARQEFYICS 281
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
DG+PI SEAER+R+ CL+AAI RR+ EG+ LELC DR GLLS+VTR FRENGL V
Sbjct: 282 ADGSPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAH 341
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQ------ 421
AEV+T+G A NVFYV DA G IE+VR +G L V ++ PP+
Sbjct: 342 AEVSTKGGLASNVFYVTDADGKAAGQSAIEAVRARVGADCLVVGEE---PRPPRVFPEAG 398
Query: 422 -----ESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
G + ++ LYNLGLIKSCS
Sbjct: 399 PGDRDHGGGGLGLVYLGNLVKRNLYNLGLIKSCS 432
>gi|226510421|ref|NP_001151985.1| ACR8 [Zea mays]
gi|195651513|gb|ACG45224.1| ACR8 [Zea mays]
Length = 433
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/453 (48%), Positives = 280/453 (61%), Gaps = 36/453 (7%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN ATL++VDSA KRG LLE VQVL DLDL I +AYIS
Sbjct: 4 LDEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYIS 63
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH-TTIE 129
SDG WFMDVFHVTD+ G KL++D V IQQSLG R AALE T +E
Sbjct: 64 SDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGXWNEPARP--------AALEGLTALE 115
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189
LTG DR GLLSEVFAVL+DL+C V+ A WTH R+A V ++ E D +A+I
Sbjct: 116 LTGPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEGXA------DRVARI 169
Query: 190 KRLLLYVLKGDRDKRSANTAVSVDST-HKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
L ++++GD + A AV + H +RRLH++M AD + S + +
Sbjct: 170 LARLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHELMAADHN------NSATPYPAAAAA 223
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV-IAESPEAYQEYYIRH 307
V+V+S ++GY+VV ++C DRPKLLFD VC L + YVV+H TV A QE+YIR
Sbjct: 224 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQEFYIRS 283
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
DG+PI SEAER+R+ CL+AAI RR+ EG+ LELC DR GLLS+VTR FRENGL V
Sbjct: 284 ADGSPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAH 343
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRFS 427
AEV+T+G A NVFYV DA G I++VR +G L V ++ PP+
Sbjct: 344 AEVSTKGGLASNVFYVTDADGKAAGQSAIDAVRARVGADCLVVGEE---PRPPRVFPEAG 400
Query: 428 LGN----------LFRSRSEKFLYNLGLIKSCS 450
G+ + ++ LYNLGLIKSCS
Sbjct: 401 PGDRDHGGGLGLVYLGNLVKRNLYNLGLIKSCS 433
>gi|224030455|gb|ACN34303.1| unknown [Zea mays]
Length = 437
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 282/448 (62%), Gaps = 43/448 (9%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
RV +DN S AT+I+VD NK G LLE VQVL DL+L+I +AYISSDG WFM VF+VTD
Sbjct: 11 RVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDGNWFMHVFNVTD 70
Query: 85 QNGNKLSEDDVSERIQQSLG------PRARSFRSLRRSVGVQAAL---EHTTIELTGRDR 135
Q+G+KL +V + IQ+ L P A + AL + T+IELTG DR
Sbjct: 71 QDGSKLHNREVIDHIQKCLESDGYLVPPANGY-----------ALPEDQFTSIELTGADR 119
Query: 136 PGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLY 195
PGLLSEV AVL+ L CN++ AEVWTH+ R A+V+ +T EATG + D L++++ LL
Sbjct: 120 PGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRD 179
Query: 196 VLKGDRDKRSANTAVSVDSTHKERRLHQMMY------ADRDYDMNYAESGSASGRSKPLV 249
V++GD T +S ERRLH +M + ESG G ++P V
Sbjct: 180 VMRGDGTCNRGGTGISA-----ERRLHTLMLDSVGGGGAEEAGGGRDESGGC-GVARPKV 233
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP----EAYQEYYI 305
V C ++ YTVV LRC DRPKLLFD +C L D+QYVV+H TV AE EAYQEYYI
Sbjct: 234 VVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYI 293
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
RHVDG+P+ S+AER R++ CLEAA++RR S G+ LE+ EDR GLLS++TR+FREN LS+
Sbjct: 294 RHVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSI 353
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK---DDAYSKSPPQE 422
RA +TTR +A + FYV DA GNPV T+++V +++G +LRVK DA K +
Sbjct: 354 IRAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAEG 413
Query: 423 SGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
LG+L +S + L LI+S S
Sbjct: 414 GAVSVLGSLLKSSFQ----GLRLIRSYS 437
>gi|357113138|ref|XP_003558361.1| PREDICTED: uncharacterized protein LOC100843093 [Brachypodium
distachyon]
Length = 454
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/456 (47%), Positives = 286/456 (62%), Gaps = 30/456 (6%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD- 72
+E V MN PRV VDN ATL++V SA K G LLE V L+D + +R+ YISSD
Sbjct: 10 YEHFVRHMNTPRVVVDNGVCETATLVQVHSARKNGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 73 GEWFMDVFHVTDQNGNKLSE-DDVSERIQQSLGPRARSFRSLRRSVGVQAALEH----TT 127
G WFMDVFHVTD G K+++ D + R++ SL A + +L R G ++ +
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADKLLARLESSLAAAAATADALPRPAGCDSSPAQNEGLSL 129
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
+EL G DRPGLLSEVFAVL DL+C+++ A+ WTH R+A++V++ E TG PIDD
Sbjct: 130 LELIGVDRPGLLSEVFAVLHDLRCSIVDAKAWTHGGRVAALVFVRDEDTGAPIDDAARTR 189
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDST---HKERRLHQMMYADRDYDMNYAESGSASGR 244
+I+ L YVL+G R A T + VD+ + +RRLHQ++ DR+ D A A
Sbjct: 190 RIESRLRYVLRGG--ARGART-ILVDAAAVGNLDRRLHQLLNEDREADGRPA----ADRP 242
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
+ V V+ ++GY+VV + C DRPKLLFD VCTLTD+ YVVYH T + A QE+Y
Sbjct: 243 TTTAVAVQEWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFY 302
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLS 364
IR +DG PISS AERQRVI L+AAI+RR SEG+ LEL +DR GLL+ VTR+FREN LS
Sbjct: 303 IRRLDGQPISSAAERQRVIQRLQAAIERRASEGVRLELSIKDRRGLLAYVTRVFRENSLS 362
Query: 365 VTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESG 424
VT AE+TTRG +A+NVF+V D +G P + I+ V IG LRV ++ + + +
Sbjct: 363 VTHAEITTRGDKALNVFHVTDVAGRPADPKAIDEVIHGIGTESLRVDEERWPRLCSTQGD 422
Query: 425 R----------FSLGNLFRSRSEKFLYNLGLIKSCS 450
FSLG+L + K LYNLGLI+SCS
Sbjct: 423 AGRDGGAGGGLFSLGSLVK----KNLYNLGLIRSCS 454
>gi|224141917|ref|XP_002324307.1| predicted protein [Populus trichocarpa]
gi|222865741|gb|EEF02872.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/428 (46%), Positives = 278/428 (64%), Gaps = 33/428 (7%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F+ L R+ P V +DN S T++KVDS NK+G LLE+VQVL DL+L I + YISSD
Sbjct: 12 DFDSLPERIFGPTVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKGYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQ--------SLGPRARSFRSLRRSVGVQAALE 124
WFMDVFHV D++G KL + +V IQQ S P AR++ + + E
Sbjct: 72 AGWFMDVFHVKDEHGKKLRDQNVINYIQQVINCDLSPSYPPNARAYTN--NIFEADHSSE 129
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT IE++G DRPGL SE+ A L+DL+CN++ W+HN+R+A V YI+ ++ PI+DP
Sbjct: 130 HTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDPH 189
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDS---------------THKERRLHQMMYADR 229
LA I+ L VL+ + RSA +++ ++ ERRLHQ+M + R
Sbjct: 190 RLASIEDHLTTVLRANT-VRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLMLSVR 248
Query: 230 DYDMNYAESGSASG------RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDM 283
D+D + S + +G SK +V++E+C K Y++VN+ C DR +L+FD +CTL DM
Sbjct: 249 DFDGPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDM 308
Query: 284 QYVVYHATVIAESP-EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLEL 342
QYV++HA+V ++ A+QEY+IRH DG ++E+E++RVI CLEAAI+RR SEG+ L+L
Sbjct: 309 QYVIFHASVSSDHDGRAFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSEGVLLKL 368
Query: 343 CCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKE 402
E+R GLLSD+TR+ RENGL+V RA+V T G +AVN FYV D SGN V I+S++KE
Sbjct: 369 RAENRLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVDMGFIKSMKKE 428
Query: 403 IGLTILRV 410
+GLT L V
Sbjct: 429 MGLTDLEV 436
>gi|357482521|ref|XP_003611547.1| ACT domain-containing protein [Medicago truncatula]
gi|355512882|gb|AES94505.1| ACT domain-containing protein [Medicago truncatula]
Length = 486
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/481 (43%), Positives = 291/481 (60%), Gaps = 51/481 (10%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E E L R++P RV +DN + + T++KVDSANK G LLE+VQVL DLDLII ++YISSD
Sbjct: 12 EIETLTERLHPARVCIDNNTCKDCTVVKVDSANKYGILLEMVQVLTDLDLIISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-GPRAR------------SFRSLRRSVGV 119
G WFMDVFHVTDQ G KL++ ++ +I++ L RA+ + + S +
Sbjct: 72 GGWFMDVFHVTDQAGKKLTDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYSKQI 131
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
+ E+T +E++G DRPGLLSE+ AVL ++ CNV A WTHN R+A ++Y+ + P
Sbjct: 132 -VSTENTALEMSGMDRPGLLSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEASKPGP 190
Query: 180 IDDPDTLAKIKRLLLYVL-----KGDRDK-RSANTAVSVDSTHKERRLHQMMYADRDYDM 233
I DP LA++K L V+ KG+R+ R N A TH ERRLHQ+MYADRDY+
Sbjct: 191 IRDPRRLAQVKEQLESVVVAHCEKGERNNVRLRNFAAG--RTHTERRLHQLMYADRDYEG 248
Query: 234 NYAESGSASGRSKP-----LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY 288
A G +SG K V++ C D+GY VVNL C DRPKL FD VC L DMQYVV+
Sbjct: 249 CRACHGDSSGDHKKGCDGTHVSISRCKDRGYWVVNLVCRDRPKLFFDTVCVLRDMQYVVF 308
Query: 289 HATVIAESPEAYQEYYIRH-VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDR 347
HA + ++ A QEYYIRH +G + +++ER+++I C+ AAI+RR S G+ +++C E++
Sbjct: 309 HAAISSKKSIADQEYYIRHKWNGLALRTQSEREKLILCIIAAIERRVSHGLRVDICTENK 368
Query: 348 AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTI 407
GLLS VTR+ RENGLS+ R E+ RG V FYV D SG VK +E +R+E G ++
Sbjct: 369 TGLLSKVTRVIRENGLSIPRVEIGMRGDDVVGTFYVRDPSGQEVKPNIVELLRQECGGSV 428
Query: 408 LRVKDDAYSKSPP--------------------QESGRFSLGNLFRSRSEKFLYNLGLIK 447
V D K+P +++ R S+G+ S+ K NL IK
Sbjct: 429 DVVTD---HKAPRKLSRTSSSSSSSTNSENSSIEDTPRLSIGSKLWSQIGKISSNLSPIK 485
Query: 448 S 448
S
Sbjct: 486 S 486
>gi|108707164|gb|ABF94959.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125860406|dbj|BAF46926.1| ACT-domain repeat protein 9 [Oryza sativa Japonica Group]
gi|215769363|dbj|BAH01592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 215/450 (47%), Positives = 281/450 (62%), Gaps = 30/450 (6%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD- 72
+E V MN PRV VD+ ATL++V SA K G LLE V L++ + +R+ YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 73 GEWFMDVFHVTDQNGNKLSEDD-VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
G WFMDVFHVTD G K+++ D + R++ SL A R + G AA T +EL
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALP----RAAAGGPAAEGLTLLELV 125
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEVFAVL DL+CN + A WTH R+A++V++ E TG PIDD + +I+
Sbjct: 126 GADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIES 185
Query: 192 LLLYVLKGDRDKRSANTAVSVDST--HKERRLHQMMYADRDYDMNYAESGSASGRSKPLV 249
L +VL+G R A T ++ S + +RRLHQ++ D + D A +A V
Sbjct: 186 RLRHVLRGG--ARCARTVLADPSAAGNLDRRLHQLLKEDGEADSRGAAPMTA-------V 236
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
V+ ++GY+VV + C DRPKLLFD VCTLTD+ YVVYH T + A QE+YIR D
Sbjct: 237 AVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSD 296
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G PISSEAERQ VI CL+AAI+RR SEG+ LEL DR GLL+ VTR+FRENGLSVT AE
Sbjct: 297 GRPISSEAERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAE 356
Query: 370 VTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSK---------SPP 420
+TTR A+NVF+V D +G P +TI+ V + IG LRV ++ + +
Sbjct: 357 ITTRDDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSAEGDAAGRG 416
Query: 421 QESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
G FSLG+L + K L++LGLI+SCS
Sbjct: 417 GGGGLFSLGSLVK----KNLFSLGLIRSCS 442
>gi|15239186|ref|NP_201390.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|13430688|gb|AAK25966.1|AF360256_1 putative uridylyl transferases [Arabidopsis thaliana]
gi|9759573|dbj|BAB11136.1| uridylyl transferases-like [Arabidopsis thaliana]
gi|14532892|gb|AAK64128.1| putative uridylyl transferases [Arabidopsis thaliana]
gi|22138094|gb|AAM93427.1| ACR1 [Arabidopsis thaliana]
gi|332010736|gb|AED98119.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 477
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/461 (44%), Positives = 283/461 (61%), Gaps = 37/461 (8%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E E LV R+NPPRV VDN S+ + TLIKVDSANK G LL++VQVL DLDL+I + YISSD
Sbjct: 13 EIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYISSD 72
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-----GPRARSFRS-LRRSVGV-QAALEH 125
GEWFMDVFHVTDQ GNKL++ + IQQ++ G + +S L+R V + EH
Sbjct: 73 GEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVSTEH 132
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T E+TG +RPGLLSE+ AVLSD+ C+V A WTH+ R A V+Y+ G PI DP
Sbjct: 133 TAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDPIR 192
Query: 186 LAKIKRLLLYVLK-----GDRDKRSANT----AVSVDSTHKERRLHQMMYADRDYDMNYA 236
A++K L V++ GD V V H ERRLH++MY + DY+ N
Sbjct: 193 KAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYE-NCF 251
Query: 237 ESGSASGRSKPL---------VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVV 287
+ R L VT+E+C GY++VN++C DRPKLLFD VC L ++Q+VV
Sbjct: 252 DCDCFGDRCDALWRGRCERIHVTIEACN--GYSMVNVKCRDRPKLLFDTVCALKELQFVV 309
Query: 288 YHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDR 347
+HA A+ A QEY+IR +G + +E +R+R+ +CL AAI RR S+G+ LE+ E++
Sbjct: 310 FHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRTENK 369
Query: 348 AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTI 407
GLLSDVTR+ RENGLS+TRAE+ T+G AV FYV D +G +E+V +E+G +
Sbjct: 370 MGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGAV 429
Query: 408 LRV---------KDDAYSKSPPQESGRFSLGNLFRSRSEKF 439
+ + + S S Q+ + S+G +F S+ E+
Sbjct: 430 VSAVKGVGMMPRRIGSTSDSVEQDKAKSSIGRMFWSKLERL 470
>gi|356541590|ref|XP_003539257.1| PREDICTED: uncharacterized protein LOC100811109 [Glycine max]
Length = 459
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 208/455 (45%), Positives = 286/455 (62%), Gaps = 26/455 (5%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E E L+ R++PPRV +DN S R T++KVDSAN++G LLE+VQVL DLDLII ++YISSD
Sbjct: 12 EIESLLERIHPPRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-GPRARSFRS----LRRSVGVQA-----A 122
G W MDVFHVTD+ G KL+++ + IQQ L R++ S L G QA A
Sbjct: 72 GGWCMDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQNVA 131
Query: 123 LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
+E+T +E++ DR GLLSE+ AVL +L +V A WTHN R+A ++++ ++ PI D
Sbjct: 132 MENTALEMSVTDRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGPISD 191
Query: 183 PDTLAKIKRLLLYVLKGDRDKRSAN----TAVSVDSTHKERRLHQMMYADRDYDMNYAES 238
P L ++ L V+ + N T + TH ERRLHQ+MYADRDY ES
Sbjct: 192 PKRLGLVEEQLENVVAAHGETGQKNSVRVTTLGTGRTHTERRLHQLMYADRDY-----ES 246
Query: 239 GSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
A R+ V+V C DKGY VVN+R DRPKLLFD VC LTDMQYVV+HA + ++
Sbjct: 247 CRACDRTH--VSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKRSM 304
Query: 299 AYQEYYIRHVDGN-PISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRI 357
A QEY+IRH G+ + SE+E + + CL AAI+RR S G+ +++ E+R GLLS+VTR+
Sbjct: 305 ADQEYFIRHCKGSLALPSESETEELTLCLIAAIERRVSRGLMVDIRTENRMGLLSNVTRV 364
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAY-- 415
FRENGLS++R E+ T G +AV F+V D+SG V +E VR+ G +++ +
Sbjct: 365 FRENGLSISRFEIGTEGEKAVGSFFVTDSSGEQVNPNIVELVRQASGGSVVTDHKSPHRV 424
Query: 416 --SKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKS 448
S+S + +FSLG+L SR E+ G I+S
Sbjct: 425 RQSQSDIEAKPKFSLGSLLWSRLERLSGGFGPIRS 459
>gi|297794201|ref|XP_002864985.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
gi|297310820|gb|EFH41244.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/461 (44%), Positives = 283/461 (61%), Gaps = 37/461 (8%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E E LV R+NPPRV VDN S+ + TLIKVDSANK G LL++VQVL DLDL+I + YISSD
Sbjct: 13 EIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYISSD 72
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-----GPRARSFRS-LRRSVGV-QAALEH 125
GEWFMDVFHVTDQ GNKL++ + IQQ++ G + +S L+R V + EH
Sbjct: 73 GEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVSTEH 132
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T E+TG +RPGLLSE+ AVLSD+ C+V A WTH+ R A V+Y+ G PI DP
Sbjct: 133 TAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDPIR 192
Query: 186 LAKIKRLLLYVLK-----GDRDKRSANT----AVSVDSTHKERRLHQMMYADRDYDMNYA 236
A++K L V++ GD V H ERRLH++MY + DY+ N
Sbjct: 193 KAQVKDHLDTVMEAHHRVGDVSHVVVRVVEAKGAPVGWAHTERRLHELMYGEGDYE-NCF 251
Query: 237 ESGSASGRSKPL---------VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVV 287
+ R L VT+E+C GY++VN++C DRPKLLFD VC L ++Q+VV
Sbjct: 252 DCDCFGDRCDALWRGRCERIHVTIEACN--GYSMVNVKCRDRPKLLFDTVCALKELQFVV 309
Query: 288 YHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDR 347
+HA A+ A QEY+IR +G + +E +R+R+ +CL AAI RR S G+ LE+ E++
Sbjct: 310 FHAVAGAKGSTAEQEYFIRKKNGCTLETEVQRERLRHCLVAAISRRASRGLKLEIRTENK 369
Query: 348 AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIG--- 404
GLLSDVTR+ RENGLS+TRAE+ T+G AV FYV D +G + +E+V +E+G
Sbjct: 370 MGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETNANAVEAVVRELGGAV 429
Query: 405 ------LTILRVKDDAYSKSPPQESGRFSLGNLFRSRSEKF 439
+ ++ + + S S Q+ + S+G LF S+ E+
Sbjct: 430 VSAVKAVGMVPTRMGSTSDSVEQDKAKSSIGRLFWSKLERL 470
>gi|242041567|ref|XP_002468178.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
gi|241922032|gb|EER95176.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
Length = 448
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 210/455 (46%), Positives = 283/455 (62%), Gaps = 34/455 (7%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD- 72
+E V MN PRV VDN ATL++V SA K G LLE V L+D + +R+ YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 73 GEWFMDVFHVTDQNGNKLSEDD-VSERIQQSLGPRARSFRSLRRSV---GVQAALEHTTI 128
G WFMDVFHVTD +G K+++ D + R++ SL A R+ + G A+ T +
Sbjct: 70 GRWFMDVFHVTDASGRKVADADALLARLESSLTADALPPRTPPAAAVGNGAGPAMP-TLL 128
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
EL G DRPGLLSEVFAVL DL+C++ A WTH R+A++V++ TG PIDD + +
Sbjct: 129 ELVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDVETGAPIDDAARVRR 188
Query: 189 IKRLLLYVLKGD----RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
++ L +VL+G R R AV++D RRLHQ++ D + + ++ + +
Sbjct: 189 VESRLRHVLRGGALGARMVREDAAAVNMD-----RRLHQLLNEDGEAECRADQADATA-- 241
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
V V+ ++GY+VV + C DRPKLLFD VCTLTD+ YVVYH T + A QE+Y
Sbjct: 242 ----VAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFY 297
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLS 364
IR +DG PISS AER+RVI CL+AAI+RR SEG+ LEL DR GLL+ VTR+FREN LS
Sbjct: 298 IRRLDGRPISSAAERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLS 357
Query: 365 VTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESG 424
VT AE+TTRG +A+NVF+V D +G P +TI+ V + IG LRV ++ + + E
Sbjct: 358 VTHAEITTRGDKAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGD 417
Query: 425 R---------FSLGNLFRSRSEKFLYNLGLIKSCS 450
FSLG+L + K L +LGLI+SCS
Sbjct: 418 AGRGGGGAGIFSLGSLVK----KNLASLGLIRSCS 448
>gi|357139522|ref|XP_003571330.1| PREDICTED: uncharacterized protein LOC100825212 [Brachypodium
distachyon]
Length = 456
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 294/479 (61%), Gaps = 65/479 (13%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKV-------DSANKRGSLLELVQVLNDLDLI 63
++E+EKLV+RM+ P+V +DN + ATL++V DSA RG LLE VQVL DLDL
Sbjct: 4 LNEYEKLVIRMDTPKVVIDNAACPTATLVQVRLPSTSVDSARNRGVLLEAVQVLADLDLS 63
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ--- 120
I +AYISSDG WFMDVFHVTD+ G KL++ V IQQSL + VG+
Sbjct: 64 INKAYISSDGRWFMDVFHVTDRRGRKLTDHSVISYIQQSLA-------AWNGPVGIDPSA 116
Query: 121 --AALEH-TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
A +E T +ELTG DR GL+SEVFAVL+D+ C V+ A W+H R+A +VY+
Sbjct: 117 SAAGMEGLTVLELTGADRTGLISEVFAVLADMGCGVVDARAWSHRGRLACLVYLRDADVA 176
Query: 178 LPIDDPDTLAKIKRLLLYVLKG--------DRDKRSANTAVSVDSTHKERRLHQMMYAD- 228
A+I+ L +L+G D +A A SV +H +RRLHQ+M+A
Sbjct: 177 A-----AGAARIEARLTPLLRGAAAAEPFSDSSVVAAVPACSV--SHPDRRLHQLMHAAA 229
Query: 229 -RDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVV 287
R++D A S S P V+VES ++GY+VV ++C DRPKLL+D VCTLTDM YVV
Sbjct: 230 AREHDDRRA---SPSEADTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVV 286
Query: 288 YHATV-IAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCED 346
+H TV + S A QE+YIR DG+PISS+AE +RV CL+ AI+RR+ EG+ LELC D
Sbjct: 287 FHGTVDTSASGGARQEFYIRSADGSPISSDAEMRRVSLCLQDAIERRSFEGVRLELCTPD 346
Query: 347 RAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS-GNPVKSETIESVRKEIGL 405
R GLLSDVTR FRENGL V +AEV+T+G A NVFYV + G V I++VR+++G+
Sbjct: 347 RPGLLSDVTRTFRENGLLVAQAEVSTKGDMASNVFYVTGTTAGQAVHRSAIDAVREKVGV 406
Query: 406 TILRVKDDAYSKSPPQES--------------GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
L V++ PPQ G F LGNLF+ + LY+LGLIKS S
Sbjct: 407 DSLVVEE-----RPPQLHQKETRPADRSDGGLGLFYLGNLFK----RNLYSLGLIKSFS 456
>gi|413941729|gb|AFW74378.1| hypothetical protein ZEAMMB73_033208 [Zea mays]
Length = 443
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 214/454 (47%), Positives = 274/454 (60%), Gaps = 28/454 (6%)
Query: 11 VDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS 70
+DE+EKLV+RMN PRV +DN ATL++VDSA KRG LLE VQVL DLDL I +AYIS
Sbjct: 4 LDEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYIS 63
Query: 71 SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIEL 130
SDG WFMDVFHVTD+ G KL++ V IQQSLG + T +EL
Sbjct: 64 SDGRWFMDVFHVTDRLGRKLTDASVIAYIQQSLG-------TWVEPAAAAPPEGLTALEL 116
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
TG R GLLSEVFAVL+D++C V A W H R+A V ++ ++ D +++I
Sbjct: 117 TGPGRAGLLSEVFAVLADMQCGVADARAWAHRGRLACVAHLRADDPADGDGD-GRVSRIL 175
Query: 191 RLLLYVLKGDRDKRSANTAVSVDS--THKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
L ++L+GD A S H +RRLHQ+M AD A P
Sbjct: 176 ARLSHLLRGDGVVAPGAVAAVPASGVAHADRRLHQLMSADLH---RAAPVPVPVPALAPA 232
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V+V+S ++GY+VV ++C DRPKLLFD CTL DM YVV+H TV + A QE+YIR
Sbjct: 233 VSVQSWAERGYSVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRA 292
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
DG+PI SEAER+ + + L+AAI+RR+ EG+ LELC DRAGLLS+VTR FRENGL V +A
Sbjct: 293 DGSPIRSEAEREMLTHHLQAAIERRSLEGVRLELCAPDRAGLLSEVTRTFRENGLLVAQA 352
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQES----- 423
EV+T+G QA NVFYV DA+G I++VR+ +G L V ++ PPQ+
Sbjct: 353 EVSTKGDQACNVFYVTDAAGKAPDRGAIDAVRERVGADRLVVSEE---PRPPQQQLYPDA 409
Query: 424 -------GRFSLGNLFRSRSEKFLYNLGLIKSCS 450
G + + LYNLGLIKSCS
Sbjct: 410 SGPGSGGGGGLGLVYLGNLVRRNLYNLGLIKSCS 443
>gi|356497013|ref|XP_003517359.1| PREDICTED: uncharacterized protein LOC100781435 [Glycine max]
Length = 477
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 204/466 (43%), Positives = 291/466 (62%), Gaps = 30/466 (6%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E E L+ R++PPRV ++N S T++KVDSAN++G LLE+VQVL DLDLII ++YISSD
Sbjct: 12 EIESLIERIHPPRVCIENDSCPDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFR-----SLRRSVGVQAAL--EH 125
G W MDVFHVTD+ G KL+++ + IQQ + + R S + Q + E+
Sbjct: 72 GGWCMDVFHVTDEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVPKEN 131
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E++ DRPGLLSE+ AVL +L C+V A WTHN R+A ++++ ++ PI DP+
Sbjct: 132 TALEMSVTDRPGLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPISDPER 191
Query: 186 LAKIKRLLLYVLKGDRD---KRSAN-TAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L ++ L V+ + K+S T + TH ERRLHQ+MYADRDY+ A G +
Sbjct: 192 LGLVEEQLENVVAAHGETGQKKSVRVTTLGTGRTHTERRLHQLMYADRDYESCRACDGDS 251
Query: 242 SGRSKP-----LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAES 296
SG K V+V C DKGY VVN+R DRPKLLFD VC LTDMQYVV+HA + ++
Sbjct: 252 SGEHKKGCDGTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKR 311
Query: 297 PEAYQEYYIRHVDGN-PISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVT 355
A+QEY+IR+ G+ + SE E++ + CL AAI+RR S G+ +++ ++R GLLS+VT
Sbjct: 312 SMAHQEYFIRNCKGSLALPSEREKEELTLCLIAAIERRVSHGLMVDIRTDNRMGLLSNVT 371
Query: 356 RIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL------- 408
R+FRENGLS++R E+ T G +AV F+V D+SG V + +E VR+ G +++
Sbjct: 372 RVFRENGLSISRFEIGTEGEKAVGSFFVTDSSGEEVNPDIVELVRQASGGSVVTDHKSPH 431
Query: 409 RVKDDAYSKSPPQESG------RFSLGNLFRSRSEKFLYNLGLIKS 448
RV + S + G +FSLG+L SR E+ G ++S
Sbjct: 432 RVHQSSSSSDINETMGSMEPKPKFSLGSLLWSRLERLSGGFGPLRS 477
>gi|242061954|ref|XP_002452266.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
gi|241932097|gb|EES05242.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
Length = 422
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/385 (51%), Positives = 258/385 (67%), Gaps = 20/385 (5%)
Query: 45 NKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLG 104
NK G LLE++QVL+DLDL I +AYI+SDG WFMDVFHV D+ G K+++D + I+++LG
Sbjct: 2 NKNGILLEVLQVLSDLDLHIFKAYITSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKALG 61
Query: 105 PRA-----RSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVW 159
P + ++ RSVG+ + +HT IEL G DR GLLSE+FAVL+DL+CNV+ AEVW
Sbjct: 62 PESNLLCPKASNKQGRSVGLHSIGDHTAIELKGPDRTGLLSEIFAVLADLQCNVLAAEVW 121
Query: 160 THNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRS-----------AN- 207
TH R+A VVY+ ATGL IDDP +++I+ L +VL+G AN
Sbjct: 122 THRMRVACVVYVNDVATGLAIDDPGRVSRIENRLRHVLRGYGGGGGGNDDDDGSGAHANF 181
Query: 208 TAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCP 267
T S H +RRLHQ+M+AD D A + G +P VTVE C +K Y+VVN++C
Sbjct: 182 TDASSTPHHLDRRLHQLMHADVDVAPAAALAAGGQG-DRPEVTVEHCEEKSYSVVNVKCR 240
Query: 268 DRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLE 327
DR KLLFD VCTLTDM+YVV+HA V +E+ QE YIR DG + + E ++VI LE
Sbjct: 241 DRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIRRKDGKTLLKD-EAEKVIRSLE 299
Query: 328 AAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
AAI RR SEG +LE+ DR GLLSDVTR+ RE+GL+V+RA+VTT G QA NVFYV D S
Sbjct: 300 AAISRRVSEGFTLEVRGRDRVGLLSDVTRVLREHGLTVSRADVTTEGGQATNVFYVRDPS 359
Query: 388 GNPVKSETIESVRKEIGLT-ILRVK 411
G PV +T+E +R + G T +L VK
Sbjct: 360 GQPVDMKTVEGLRGQFGQTAMLNVK 384
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VTV++ + +++ V ++ L ++V L D++ ++ A +SS+ + + ++
Sbjct: 220 PEVTVEHCEEKSYSVVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIR 279
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVF 143
++G L +D+ + I RSL ++ + + E T+E+ GRDR GLLS+V
Sbjct: 280 RKDGKTLLKDEAEKVI-----------RSLEAAISRRVS-EGFTLEVRGRDRVGLLSDVT 327
Query: 144 AVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
VL + V A+V T + +V Y+ + +G P+D
Sbjct: 328 RVLREHGLTVSRADVTTEGGQATNVFYV-RDPSGQPVD 364
>gi|414865819|tpg|DAA44376.1| TPA: ACR8 [Zea mays]
Length = 440
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 209/451 (46%), Positives = 275/451 (60%), Gaps = 34/451 (7%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD- 72
+E V MN PRV VDN ATL++V SA K G LLE V L+D + +R+ YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTG 132
G WFMDVFHVTD G K+++ D + + + R A T +EL G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADADALLARLESSLSADALPPRTPPAAAAGTP-TLLELVG 128
Query: 133 RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRL 192
DRPGLLSEVFAVL DL+C++ A WTH R+A++V++ E TG PIDD + +++
Sbjct: 129 ADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDEDTGAPIDDAARVRRVESR 188
Query: 193 LLYVLKGD----RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS--K 246
L +VL+G R R+ AV++D RRLHQ++ E G A R+
Sbjct: 189 LRHVLRGGALGARMVRADAAAVNMD-----RRLHQLLN----------EDGEAESRADQA 233
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
V V+ ++GY+V+ + C DRPKLLFD VCTLTD+ YVVYH T + A QE+YIR
Sbjct: 234 TAVAVQDWGERGYSVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIR 293
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
+DG PISS AER+RVI CL+AAI+RR SEG+ LEL DR GLL+ VTR+FREN LSVT
Sbjct: 294 RLDGRPISSAAERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVT 353
Query: 367 RAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQE---- 422
AE+TTRG A+NVF+V D +G P +TI+ V + IG LRV ++ + + E
Sbjct: 354 HAEITTRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCLTEGDAG 413
Query: 423 ---SGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
+G FSLG+L + K L +LGLI+SCS
Sbjct: 414 RGGAGIFSLGSLVK----KNLASLGLIRSCS 440
>gi|195639256|gb|ACG39096.1| ACR8 [Zea mays]
Length = 450
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 209/460 (45%), Positives = 278/460 (60%), Gaps = 42/460 (9%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS-D 72
+E V MN PRV VDN + ATL++V SA K G LL+ V L+D + +R+ YISS D
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLBAVXALSDHGVCVRKGYISSBD 69
Query: 73 GEWFMDVFHVTDQNGNKLSEDD-VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
G WFMDVFHV D G K+++ + R++ SL + R A T +EL
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGALLARLESSL---SADALPPRPPPAAAGAGTPTLLELV 126
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEVFAVL DL+C + A WTH R+A++V++ E TG PIDD + +++
Sbjct: 127 GADRPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVES 186
Query: 192 LLLYVLKGD----RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
L +VL+G R R+ +AV++D RRLHQ++ D E+GS + R++
Sbjct: 187 RLRHVLRGGALGARMVRADASAVNMD-----RRLHQLLNED-------GEAGSRADRAES 234
Query: 248 --------LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
V V+ ++GY+VV + C DRPKLLFD VCTLTD+ YVVYH T + A
Sbjct: 235 EAEAPTPTAVAVQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHA 294
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFR 359
QE+YIR +D PISS ER+RVI CLEAAI+RR SEG+ LEL DR GLL+ VTR+FR
Sbjct: 295 RQEFYIRRLDERPISSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFR 354
Query: 360 ENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP 419
EN LSVT AE+TTRG A+NVF+V D +G P +TI+ V + IG LRV ++ + +
Sbjct: 355 ENSLSVTHAEITTRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLC 414
Query: 420 PQESGR---------FSLGNLFRSRSEKFLYNLGLIKSCS 450
E FSLG+L + K L +LGLI+SCS
Sbjct: 415 STEGDAGRGGGGAGIFSLGSLVK----KNLVSLGLIRSCS 450
>gi|357487957|ref|XP_003614266.1| ACR4 [Medicago truncatula]
gi|355515601|gb|AES97224.1| ACR4 [Medicago truncatula]
Length = 312
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/302 (56%), Positives = 223/302 (73%), Gaps = 3/302 (0%)
Query: 4 WSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
+S S + DE+EKL RMNPPRV +DN +++ AT+I+VDSANK+G LLE+VQ+L DL+LI
Sbjct: 11 YSQSHYMDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLI 70
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL 123
I +AYISSDG WFMDVF+VTDQ+GNK++++ + + I++SLGP + F + RSVGV+
Sbjct: 71 ITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPES-CFATTMRSVGVKQTP 129
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
+HT IEL G DRPGLLSEV AVL++LKCN++ AEVWTHN R A+V+++T E TG I D
Sbjct: 130 DHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDS 189
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
L+ IK LL VL G KR A T V+ DSTH +RRLHQMM+ DRDY+ +
Sbjct: 190 QRLSLIKELLCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYER--VDDDDFDE 247
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ +P V V + +DK Y+VV + C DRPKL+FD VCTLTDMQYVV+HA + AE P+AYQ Y
Sbjct: 248 KQRPNVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQVY 307
Query: 304 YI 305
I
Sbjct: 308 II 309
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V +++ + TV+ + ++ +L + V LTD+ ++ A + ++ + +
Sbjct: 31 PRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 90
Query: 307 HVDGNPISSEAERQRV------INCLEAAIK----RRTSEGISLELCCEDRAGLLSDVTR 356
DGN ++ E + +C ++ ++T + ++EL DR GLLS+V+
Sbjct: 91 DQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMGSDRPGLLSEVSA 150
Query: 357 IFRENGLSVTRAEVTTRGSQAVNVFYVVD-ASGNPVKSETIESVRKEIGLTIL 408
+ ++ AEV T +A V +V D +G+ + S+ KE+ +L
Sbjct: 151 VLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKELLCNVL 203
>gi|125543116|gb|EAY89255.1| hypothetical protein OsI_10752 [Oryza sativa Indica Group]
Length = 398
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 260/414 (62%), Gaps = 30/414 (7%)
Query: 50 LLELVQVLNDLDLIIRRAYISSD-GEWFMDVFHVTDQNGNKLSEDD-VSERIQQSLGPRA 107
LLE V L++ + +R+ YISSD G WFMDVFHVTD G K+++ D + R++ SL A
Sbjct: 2 LLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKVADADALLARLESSLSAEA 61
Query: 108 RSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMAS 167
R + G AA T +EL G DRPGLLSEVFAVL DL+CN + A WTH R+A+
Sbjct: 62 LP----RAAAGGPAAEGLTLLELVGADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAA 117
Query: 168 VVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDST--HKERRLHQMM 225
+V++ E TG PIDD + +I+ L +VL+G R A T ++ S + +RRLHQ++
Sbjct: 118 LVFVRDEETGAPIDDAARVRRIESRLRHVLRGG--ARCARTVLADPSAAGNLDRRLHQLL 175
Query: 226 YADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQY 285
D + D A +A V V+ ++GY+VV + C DRPKLLFD VCTLTD+ Y
Sbjct: 176 NEDGEADSRGAAPMTA-------VAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDY 228
Query: 286 VVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCE 345
VVYH T + A QE+YIR DG PISSEAERQ VI CL+AAI+RR SEG+ LEL
Sbjct: 229 VVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAERQHVIRCLQAAIERRASEGVRLELRIS 288
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLL+ VTR+FRENGLSVT AE+TTR A+NVF+V D +G P +TI+ V + IG
Sbjct: 289 DRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKTIDEVIQRIGT 348
Query: 406 TILRVKDDAYSK---------SPPQESGRFSLGNLFRSRSEKFLYNLGLIKSCS 450
LRV ++ + + G FSLG+L + K L++LGLI+SCS
Sbjct: 349 ESLRVDEERWPRLCSAEGDAAGRGGGGGLFSLGSLVK----KNLFSLGLIRSCS 398
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
V V + R +++ V ++ L ++V L DLD ++ +DG+ F++
Sbjct: 192 VAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRS 251
Query: 86 NGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAV 145
+G +S S R R L+ ++ +A+ E +EL DR GLL+ V V
Sbjct: 252 DGRPIS----------SEAERQHVIRCLQAAIERRAS-EGVRLELRISDRRGLLAYVTRV 300
Query: 146 LSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK-IKRLLLYVLKGDRDK 203
+ +V AE+ T + MA V+ ++ G P DP T+ + I+R+ L+ D ++
Sbjct: 301 FRENGLSVTHAEITTRDD-MAMNVFHVTDVAGRPA-DPKTIDEVIQRIGTESLRVDEER 357
>gi|357163126|ref|XP_003579632.1| PREDICTED: uncharacterized protein LOC100841900 [Brachypodium
distachyon]
Length = 474
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 198/428 (46%), Positives = 276/428 (64%), Gaps = 28/428 (6%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV MNPPRV +DN ++ T I+VDS N G+LL LVQV+ DL+L++R+AY ++
Sbjct: 8 DEYAKLVRGMNPPRVEIDNEISKIGTFIQVDSVNTHGTLLALVQVITDLNLVVRKAYFTA 67
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR-------RSVGVQAALE 124
DG+WFMDVF+VTD++G K++++ IQ +L + R S + + +
Sbjct: 68 DGDWFMDVFYVTDRDGEKVTDEATLNYIQTTLESDDCYYTEARDNSADIVPSESEEDSHQ 127
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID-DP 183
+++IELTG DRPGLLSEV AVLSD++C V+ A++WT N+R+A+VV + ATG+ I DP
Sbjct: 128 YSSIELTGTDRPGLLSEVCAVLSDVRCAVVSADLWTCNTRVAAVVQVADAATGVAISADP 187
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVD------STHKERRLHQMMYADRDY-----D 232
+A+I R L ++L+ R A A SV + HKERRLHQ+M AD + D
Sbjct: 188 ARVAEISRRLAHLLRS-RSWCHATVAASVAEEPSLVAMHKERRLHQLMAADPESGVIEGD 246
Query: 233 MNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV 292
Y + + + +V V C +GYT V +RC D PKLLFD VCT+TD QYVVYH V
Sbjct: 247 GAYLQPAPGTTPAT-VVEVTDCAQRGYTFVVVRCRDVPKLLFDTVCTITDAQYVVYHGNV 305
Query: 293 IAESPE---AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAG 349
E P+ AYQEYY+R+ G ++E ER + LEAA++RR ++GI LE+ DRAG
Sbjct: 306 STE-PDGVTAYQEYYVRNKAGLA-ATEPERLLLKRQLEAAVERRFADGIELEVRSGDRAG 363
Query: 350 LLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG--NPVKSETIESVRKEIGLTI 407
LLSDVTRI RENGL++ RA V ++G +AV+ FYV D G PV+ TI+++R +IG
Sbjct: 364 LLSDVTRIIRENGLTILRAGVKSQGGEAVDTFYVSDPMGLDYPVEPRTIDTIRAQIGEAT 423
Query: 408 LRVKDDAY 415
LRVK + +
Sbjct: 424 LRVKKNPF 431
>gi|326518242|dbj|BAK07373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 193/482 (40%), Positives = 274/482 (56%), Gaps = 47/482 (9%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F+ ++ R P V VDN + TL+KVDS N+ G LLE+VQ+L DLDL+I ++YISSD
Sbjct: 12 DFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARS-------FRSLRRSV---GVQAA 122
G W MDVFHVTDQ G KL++ + IQQ+L P RS F + +V G
Sbjct: 72 GGWLMDVFHVTDQIGCKLTDPSLPGFIQQALLPFQRSGSGPSPKFTTCLGNVVGPGGPDV 131
Query: 123 LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
+ ++E T DRPGLLS + VL D C+V + WTH+ R A V+Y+T+
Sbjct: 132 SDCASLEFTVHDRPGLLSSITQVLVDQGCHVASGQAWTHSGRAAGVLYVTATGADSAALH 191
Query: 183 PDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS-----THKERRLHQMMYADRDYDMN--- 234
P A+I+RL+ V+ + V + + H ERR+HQ+M+ D DY+ +
Sbjct: 192 PSRWARIERLVNAVVDARENMSGERRWVCMSAPVRGRVHTERRMHQLMHDDGDYESSPAP 251
Query: 235 -------------YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLT 281
A + ++ R++ VT+++ +KGY +V + DRPKLLFD VC LT
Sbjct: 252 TPVDEEHFCMGDRAATAARSAHRTETRVTIDNWEEKGYAIVKMTSRDRPKLLFDTVCALT 311
Query: 282 DMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLE 341
DM YVV+HATV A+ P A QEYYIRH DG + S AERQ+V CL AA++RR S G+ +E
Sbjct: 312 DMHYVVFHATVGAQGPLAIQEYYIRHKDGRTVDSYAERQKVSRCLVAAVERRASHGVRVE 371
Query: 342 LCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVR- 400
+ DR+GLLSD TR RE+GLS+ R E+ + +A+ F++V +G V+ E + +VR
Sbjct: 372 VRAADRSGLLSDFTRALREHGLSLLRVEIKRQKEEAIGTFFLVTDTGGEVRPEALRAVRT 431
Query: 401 --KEIGLTILRVKDDAYSKSP------------PQESGRFSLGNLFRSRSEKFLYNLGLI 446
E+G++ L V +A+ P QE R+SLG+L S K N G I
Sbjct: 432 RVAEMGIS-LDVAKEAFGWPPVRKTRALAPSPADQERPRYSLGSLLWSHLGKLSNNFGYI 490
Query: 447 KS 448
+S
Sbjct: 491 RS 492
>gi|357140136|ref|XP_003571626.1| PREDICTED: uncharacterized protein LOC100823992 [Brachypodium
distachyon]
Length = 470
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/458 (41%), Positives = 283/458 (61%), Gaps = 28/458 (6%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
++E L R+ RV VDN S + T++KV+S NK+ LLE+++VL DL+L I + Y+SSD
Sbjct: 11 DYENLNERIYGTRVHVDNESCGRCTVVKVNSRNKQDLLLEVLEVLIDLELSITKCYVSSD 70
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPR-ARSFRSLRRSVGVQA----ALEHTT 127
G W +DVFHV DQ G+K+ I+Q++ R AR F ++R S + A +T
Sbjct: 71 GGWSLDVFHVKDQEGSKVYNKKAISYIEQAICTREARRF-TVRGSNEFASRPDVAAHYTE 129
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IE+ G +RPG+ SE+ AVL++ CNV+ A W+H +A V +++ E+T PI+D + LA
Sbjct: 130 IEMIGHNRPGIFSEISAVLAEEGCNVIEAHAWSHKDSLACVAFVSDESTSSPINDRNRLA 189
Query: 188 KIKRLLLYVLKG----DRDKRSANTAV-SVD--STHKERRLHQMMYADRDYDMNYAESGS 240
I+ L VL+ D D+RSA + VD ++H ERRLHQ+M+A RD+D + +
Sbjct: 190 TIEDHLGTVLRSGTSMDDDQRSARAHLLGVDGLTSHPERRLHQLMFASRDFDGQPGQVST 249
Query: 241 A------SGRSK---PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHAT 291
A G K +V+++ C +KGY+VVN+ C DRPKL+FD VCTLTDMQ+ V+HA+
Sbjct: 250 AFPMLSLDGYKKDKSTVVSLDRCNEKGYSVVNVECVDRPKLMFDTVCTLTDMQFNVFHAS 309
Query: 292 VIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDR-AGL 350
V ++ P A QEYYIRH DG+ + + E+ V+ L+AA++RRT EG+ LELC E + G
Sbjct: 310 VSSQGPFACQEYYIRHKDGHMLDTADEKCLVVKGLKAAVERRTCEGVKLELCTEKKNVGF 369
Query: 351 LSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRV 410
LS +TR+ RE+GL+VTRA++ G N FYV D SGN + +ESVR+E+ +V
Sbjct: 370 LSHITRVLRESGLTVTRADIAMDGDVTKNTFYVKDISGNKIDMNAVESVRRELEPLPFQV 429
Query: 411 KDDAYSK-----SPPQESGRFSLGNLFRSRSEKFLYNL 443
KD+ S +P E F + + +S+ E+ +
Sbjct: 430 KDELLSPGLPEGNPASERNGFCILGMLKSKIERLSHGF 467
>gi|28273389|gb|AAO38475.1| putative ACT domain containing protein [Oryza sativa Japonica
Group]
Length = 512
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 200/502 (39%), Positives = 267/502 (53%), Gaps = 67/502 (13%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F+ L+ R P V VDN + TL+KVDS N+ G LLE+VQ+L DLDL+I ++YISSD
Sbjct: 12 DFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL---------GPRARSFRSLRRSVGVQA-- 121
G W MDVFHVTDQ G KL++ + E IQ++L GP R L VG
Sbjct: 72 GGWLMDVFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLGNVVGPGGPD 131
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ +E T DRPGLLS + VL+D C+V + WTH+ R A V+Y+T+ G +
Sbjct: 132 VSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVTTAGGGAAAE 191
Query: 182 DPDT----LAKIKRLLLYV------LKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDY 231
I+ L+ V L G+R S + V H ERRLHQ+M+ DRDY
Sbjct: 192 AAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVE-GRVHTERRLHQLMHDDRDY 250
Query: 232 DMN----------------YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFD 275
+ A + + R + V++ES ++GY VV + DRPKLLFD
Sbjct: 251 ESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTSRDRPKLLFD 310
Query: 276 AVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTS 335
VC LTDM YVV+HATV ++ P A QEYYIRH DG + S AERQ+V CL AA++RR S
Sbjct: 311 TVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAAVERRAS 370
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
G +E+ DR+GLLSD TR+ RE+GLS+ R E+ R +A+ FY+V +G V++E
Sbjct: 371 HGAKVEVRAADRSGLLSDFTRMLREHGLSLLRVELKRRKDEAIGTFYLVTDAGGEVRAEA 430
Query: 396 IESVRKEIGLTIL--RVKDDAYSKSP---------------------------PQESGRF 426
+ +VR +G + V DA P QE R
Sbjct: 431 LHAVRARVGKVGISFEVAKDAPGWPPVRKTSVPAPPAEAAPAVATPAAPPAAEGQERPRS 490
Query: 427 SLGNLFRSRSEKFLYNLGLIKS 448
SLG+L S K N G IKS
Sbjct: 491 SLGSLLWSHLGKLSNNFGYIKS 512
>gi|357116994|ref|XP_003560261.1| PREDICTED: uncharacterized protein LOC100826395 [Brachypodium
distachyon]
Length = 506
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 248/435 (57%), Gaps = 44/435 (10%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F+ ++ R P V VDN + TL+KVDS N+ G LLE+VQ+L DLDL+I ++YISSD
Sbjct: 12 DFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL---------GPRARSFRSLRRSVGVQAA- 122
G W MDVFHVTDQ G KL++ + IQQ+L GP + L VG
Sbjct: 72 GGWLMDVFHVTDQIGRKLTDPSLPGFIQQALVPFQRRPGHGPSPKFTTCLGNVVGPGGPD 131
Query: 123 -LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT--SEATGLP 179
+ ++E T DRPGLLS + VL D C+V + WTH+ R A V+Y+T + A P
Sbjct: 132 VSDCASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLYVTMTAAAEAQP 191
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS-----THKERRLHQMMYADRDYD-- 232
A I+RL+ V+ A V + + H ERRLHQ+M+ DRDY+
Sbjct: 192 PHQ-SRWAHIERLVSAVVDARESVSGARRWVCMSAPAPGRVHTERRLHQLMHDDRDYESG 250
Query: 233 -----------------------MNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDR 269
M SG+ G + VT+++ ++GY VV + DR
Sbjct: 251 PAPTPVDEEHFSMGDVRAATMMLMAARRSGARRGAADTRVTIDNWEERGYAVVKMTSRDR 310
Query: 270 PKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA 329
PKLLFD VC LTDMQYVV+HATV ++ P A QEYYIRH DG + S AERQ+V CL AA
Sbjct: 311 PKLLFDTVCGLTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAA 370
Query: 330 IKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
++RR S G+ +E+ DR+GLLSD TRI RE+GLS+ R E+ + +AV FY+V SG
Sbjct: 371 VERRASHGVRVEVRAADRSGLLSDFTRILREHGLSLLRVELKRQKDEAVGTFYLVTDSGG 430
Query: 390 PVKSETIESVRKEIG 404
V+ E + +VR +G
Sbjct: 431 EVRPEVVRAVRARVG 445
>gi|145334915|ref|NP_001078803.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|332010737|gb|AED98120.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 425
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 252/421 (59%), Gaps = 37/421 (8%)
Query: 53 LVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-----GPRA 107
+VQVL DLDL+I + YISSDGEWFMDVFHVTDQ GNKL++ + IQQ++ G
Sbjct: 1 MVQVLADLDLVISKCYISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGIT 60
Query: 108 RSFRS-LRRSVGV-QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRM 165
+ +S L+R V + EHT E+TG +RPGLLSE+ AVLSD+ C+V A WTH+ R
Sbjct: 61 KEMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERA 120
Query: 166 ASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK-----GDRDKRSANT----AVSVDSTH 216
A V+Y+ G PI DP A++K L V++ GD V V H
Sbjct: 121 AMVIYLEDGFNGGPIIDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAH 180
Query: 217 KERRLHQMMYADRDYDMNYAESGSASGRSKPL---------VTVESCTDKGYTVVNLRCP 267
ERRLH++MY + DY+ N + R L VT+E+C GY++VN++C
Sbjct: 181 TERRLHELMYGEGDYE-NCFDCDCFGDRCDALWRGRCERIHVTIEACN--GYSMVNVKCR 237
Query: 268 DRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLE 327
DRPKLLFD VC L ++Q+VV+HA A+ A QEY+IR +G + +E +R+R+ +CL
Sbjct: 238 DRPKLLFDTVCALKELQFVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLV 297
Query: 328 AAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
AAI RR S+G+ LE+ E++ GLLSDVTR+ RENGLS+TRAE+ T+G AV FYV D +
Sbjct: 298 AAISRRASQGLKLEIRTENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVN 357
Query: 388 GNPVKSETIESVRKEIGLTILRV---------KDDAYSKSPPQESGRFSLGNLFRSRSEK 438
G +E+V +E+G ++ + + S S Q+ + S+G +F S+ E+
Sbjct: 358 GGETGPSEVEAVVRELGGAVVSAVKGVGMMPRRIGSTSDSVEQDKAKSSIGRMFWSKLER 417
Query: 439 F 439
Sbjct: 418 L 418
>gi|125604137|gb|EAZ43462.1| hypothetical protein OsJ_28068 [Oryza sativa Japonica Group]
Length = 415
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/409 (44%), Positives = 244/409 (59%), Gaps = 51/409 (12%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV RMNPP V +DN S AT+I+VD K G LLE VQVL DL+L+I +AYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT-IEL 130
DG WFMDVF+VTDQ+GNK+ +V++ I++ L G A E TT IEL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIEL 134
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
TG DRPGLLSEV AVL+ L+CN++ AEVWTH+ R A+V+ IT EATGLP+ D L++++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 191 RLLLYVLK----GDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
LL V++ G D R +TAVS+ + + ERRLH++M D D E G +
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 247 PLVTVE-SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
V CT++ YTVV LRC DRP+LLFD + LTD+ YVV+H T
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLSPLTDLHYVVFHGT-------------- 300
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
G+ LE+ EDRAGLLS++TR+FREN LS+
Sbjct: 301 -------------------------------GLELEVKTEDRAGLLSEITRVFRENSLSI 329
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA 414
RA +TT+ +A + FYV DA GNPV + +E++ +++G +LRVK +
Sbjct: 330 IRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNG 378
>gi|226508650|ref|NP_001145757.1| uncharacterized protein LOC100279264 [Zea mays]
gi|219884321|gb|ACL52535.1| unknown [Zea mays]
gi|413933158|gb|AFW67709.1| hypothetical protein ZEAMMB73_506779 [Zea mays]
Length = 494
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 200/504 (39%), Positives = 281/504 (55%), Gaps = 68/504 (13%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
M C S ++ D F+ L+ R+ P V VDN + TL+KVDS N+ G LL++VQ+L DL
Sbjct: 1 MKCVSGAYFEPD-FDPLLDRLGTPGVVVDNETREDCTLVKVDSVNRDGVLLDMVQLLTDL 59
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL----------GPRARSF 110
DL+I ++YI SDG W MDVFHVTD+ G KL++ + E IQ++L PR F
Sbjct: 60 DLVISKSYICSDGGWLMDVFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPR---F 116
Query: 111 RSLRRSVGVQAALEHT---TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMAS 167
+ +V A + + +E T DRPGLLS + +VL+D C+V + WTHN R A
Sbjct: 117 TTCLGNVVGPAGPDVSGCAALEFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAG 176
Query: 168 VVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSAN---TAVSVDS---THKERRL 221
V+Y+T P+ P A+++RL+ V+ G R+ + T VS + H ERRL
Sbjct: 177 VLYVTP-----PL--PSRWARVERLVEAVV-GARENVAGERHWTRVSGPARGRVHTERRL 228
Query: 222 HQMMYADRDYDMNYAESGSASG------------------RSKPLVTVESCTDKGYTVVN 263
HQ+M DRDY+ A + G R+ V+V+S ++GY VV
Sbjct: 229 HQLMRDDRDYESGPAPTPVDEGLFGVGDKAATTARTARRARAATRVSVDSWEERGYVVVK 288
Query: 264 LRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVI 323
+ DRP LLFD VC LTDMQYVV+HATV ++ A QEYYIRH DG + S AERQ+V
Sbjct: 289 MTSRDRPSLLFDTVCALTDMQYVVFHATVGSQGVLAIQEYYIRHKDGGTVDSSAERQKVS 348
Query: 324 NCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
CL AA++RR + G+ +E+ DR+GLLSD TR+ RE+GLS+ R E+ +A VFY+
Sbjct: 349 RCLVAAVERRATHGVRVEVHAADRSGLLSDFTRVLREHGLSLLRVELKRHRDEAFGVFYL 408
Query: 384 VDASGNPVKSETIESVR---KEIGLTILRVKDDAYSKSP----------------PQESG 424
+G V++E + +V+ E+G+++ VK+ P PQE
Sbjct: 409 DTDTGGEVRTEALRAVQMRVAEMGISLDVVKETKAPGWPPVRKTSVPAPPVAGQQPQEKP 468
Query: 425 RFSLGNLFRSRSEKFLYNLGLIKS 448
R SLG+L S EK N I+S
Sbjct: 469 RPSLGSLLWSNLEKLSNNFNYIRS 492
>gi|356514354|ref|XP_003525871.1| PREDICTED: uncharacterized protein LOC100783892 [Glycine max]
Length = 481
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/468 (40%), Positives = 272/468 (58%), Gaps = 33/468 (7%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E E L+ R++PPRV +DN S+R T++K+DSAN+ G LLE+VQVL DLD +I ++YISSD
Sbjct: 12 EIESLIERIHPPRVCIDNDSSRDCTVVKIDSANRHGILLEMVQVLTDLDPVISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALE-----HTT 127
G W MDVFHVTD +GNKL++ + IQQ+L + + + + + + E +
Sbjct: 72 GGWLMDVFHVTDHDGNKLTDRGLVHYIQQTLCEARSNSKEISSDIELTSCNEPPRLVNLA 131
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELT ++ GL SE+ AVL L NV A WTHN R+A ++++ PI+ + LA
Sbjct: 132 IELTTANQHGLFSEMSAVLLGLGFNVTSATAWTHNDRVACIIHLEDAKKLGPIN-AERLA 190
Query: 188 KIKRLLLYVLKG-DRDKRSANTAVSVDS-----THKERRLHQMMYADRDYDMNYA-ESGS 240
+++ L V+K DR+ + + S H ERRLHQMMYAD DY+ A G
Sbjct: 191 QVQPELRNVVKARDRNGEEERVRLRLRSFGAGRNHTERRLHQMMYADGDYERCRACHVGD 250
Query: 241 ASGRSKP-----LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE 295
+G K VTV +KGY VVN+R DRPKLLFD VC LTDMQY V+HA V +
Sbjct: 251 RNGEKKKGCEETQVTVGRYEEKGYWVVNVRSRDRPKLLFDTVCVLTDMQYEVFHAAVSSN 310
Query: 296 SPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVT 355
A QEY++R + + +E+E+Q++ CL AAI+RR S G+ +++ E+ GLLS VT
Sbjct: 311 GSMADQEYFVRPKGSSNLDNESEKQKLSLCLIAAIERRVSHGLKVDIRAENTTGLLSKVT 370
Query: 356 RIFRENGLSVTRAEVTTRGSQ-AVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA 414
R+ RENGLS+T+ ++ + AV F V ++SG V E VR+E G +++ +
Sbjct: 371 RVIRENGLSITKVQIGVESDEMAVGSFCVANSSGQEVNPNIAELVRRETGGSVVANYNSP 430
Query: 415 Y--------------SKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKS 448
Y +KS + RFS+G++ S+ E N I+S
Sbjct: 431 YRVPKSLSSSKTMHETKSSTEVGQRFSIGSMLWSQLECLSNNFRPIRS 478
>gi|242038257|ref|XP_002466523.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
gi|241920377|gb|EER93521.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
Length = 500
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 193/489 (39%), Positives = 271/489 (55%), Gaps = 53/489 (10%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F+ L+ R P V VDN + TL+KVDS N+ G LLE+VQ+L DLDL+I ++YISSD
Sbjct: 12 DFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVIYKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL--------GPRARSFRSLRRSV---GVQA 121
G W MDVFHVTDQ G KL++ + E IQ++L GP F + +V G
Sbjct: 72 GGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTCLGNVVGPGGPD 131
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ +E T DR GLLS + +VL D C+V + WTHN R A V+Y+T+ A D
Sbjct: 132 VSDCAALEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLYVTTTAAATTAD 191
Query: 182 D-------PDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS-----THKERRLHQMMYADR 229
P A+I+RL+ V+ + V V H ERRLHQ+M+ DR
Sbjct: 192 GAGAAALLPSRWARIERLVNAVVDARENVTGERHWVCVSEPVQGRVHTERRLHQLMHDDR 251
Query: 230 DYDMNYAESG-----------SASGRSK-----PLVTVESCTDKGYTVVNLRCPDRPKLL 273
DY+ A + +A+ R+ V+++S ++GY VV + DRP+LL
Sbjct: 252 DYESGPAPTPVDEELFSMGEKAATARTARRGAVTRVSIDSWEERGYAVVKMTSRDRPRLL 311
Query: 274 FDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRR 333
FD VC LTDMQYVV+HATV ++ A QEYYIRH DG + S AERQ+V CL AA++RR
Sbjct: 312 FDTVCALTDMQYVVFHATVGSQGALAIQEYYIRHKDGRTVDSSAERQKVSRCLVAAVERR 371
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
+ G+ +E+ DR+GLLSD TR+ RE+GLS+ R E+ A +FY+V +G V++
Sbjct: 372 ATHGVRVEVRAADRSGLLSDFTRVLREHGLSLLRVELKRHKDDAFGIFYLVTDTGGEVRA 431
Query: 394 ETIESVR---KEIGLTILRVKD--------DAYSKSPP---QESGRFSLGNLFRSRSEKF 439
E + +V+ E+ +++ VK+ +PP E R SLG+L S K
Sbjct: 432 EALRAVQARVAEMDISLDVVKEAPGWPPVRKTSVPAPPVAGPERPRPSLGSLLWSHLGKL 491
Query: 440 LYNLGLIKS 448
N I+S
Sbjct: 492 SNNFNYIRS 500
>gi|413956339|gb|AFW88988.1| hypothetical protein ZEAMMB73_242006 [Zea mays]
Length = 486
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/372 (47%), Positives = 232/372 (62%), Gaps = 17/372 (4%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD- 72
+E V MN PRV VDN + ATL++V SA K G LL+ V L+D + +R+ YISSD
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLDAVAALSDHGVCVRKGYISSDD 69
Query: 73 GEWFMDVFHVTDQNGNKLSEDD-VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
G WFMDVFHV D G K+++ + R++ SL + R A T +EL
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGALLARLESSL---SADALPPRPPPAAAGAGTPTLLELV 126
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEVFAVL DL+C + A WTH R+A++V++ E TG PIDD + +++
Sbjct: 127 GADRPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVES 186
Query: 192 LLLYVLKGD----RDKRSANTAVSVDSTHKERRLHQMMYADRDYD--MNYAESGSASGRS 245
L +VL+G R R+ +AV++D RRLHQ++ D + + AES A +
Sbjct: 187 RLRHVLRGGALGARMVRADASAVNMD-----RRLHQLLNEDGEAGSRADRAES-EAEAPT 240
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
V V+ ++GY+VV + C DRPKLLFD VCTLTD+ YVVYH T + A QE+YI
Sbjct: 241 PTAVAVQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYI 300
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
R +D PISS ER+RVI CLEAAI+RR SEG+ LEL DR GLL+ VTR+FREN LSV
Sbjct: 301 RRLDERPISSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSV 360
Query: 366 TRAEVTTRGSQA 377
T AE+TTRG
Sbjct: 361 THAEITTRGRHG 372
>gi|125545602|gb|EAY91741.1| hypothetical protein OsI_13381 [Oryza sativa Indica Group]
Length = 551
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 200/541 (36%), Positives = 268/541 (49%), Gaps = 106/541 (19%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F+ L+ R P V VDN + TL+KVDS N+ G LLE+VQ+L DLDL+I ++YISSD
Sbjct: 12 DFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSD 71
Query: 73 GEWFMD---------VFHVTDQNGNKLSEDDVSERIQQSL---------GPRARSFRSLR 114
G W MD +FHVTDQ G KL++ + E IQ++L GP R L
Sbjct: 72 GGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLG 131
Query: 115 RSVGVQA--ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
VG + +E T DRPGLLS + VL+D C+V + WTH+ R A V+Y+T
Sbjct: 132 NVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVT 191
Query: 173 SEATGLPIDDPDTLA----KIKRLLLYV------LKGDRDKRSANTAVSVDSTHKERRLH 222
+ G + I+ L+ V L G+R S + V H ERRLH
Sbjct: 192 TAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVE-GRVHTERRLH 250
Query: 223 QMMYADRDYDMN----------------YAESGSASGRSKPLVTVESCTDKGYTVVNLRC 266
Q+M+ DRDY+ A + + R + V++ES ++GY VV +
Sbjct: 251 QLMHDDRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTS 310
Query: 267 PDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCL 326
DRPKLLFD VC LTDM YVV+HATV ++ P A QEYYIRH DG + S AERQ+V CL
Sbjct: 311 RDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCL 370
Query: 327 EAAIKRRTS------------------------------EGISLELCCEDRAGLLSDVTR 356
AA++RR S +G +E+ DR+GLLSD TR
Sbjct: 371 VAAVERRASHVRLIIAILHFSPVGYSYARRHGRSLTMFPQGAKVEVRAADRSGLLSDFTR 430
Query: 357 IFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL--RVKDDA 414
+ RE+GLS+ R E+ R +AV FY+V +G V++E + +VR +G + V DA
Sbjct: 431 MLREHGLSLLRVELKRRKDEAVGTFYLVTDAGGEVRAEALHAVRARVGKVGISFEVAKDA 490
Query: 415 YSKSP---------------------------PQESGRFSLGNLFRSRSEKFLYNLGLIK 447
P QE R SLG+L S K N G IK
Sbjct: 491 PGWPPVRKTSVPAPPAEAAPAVATPAAPPAAEGQERPRSSLGSLLWSHLGKLSNNFGYIK 550
Query: 448 S 448
S
Sbjct: 551 S 551
>gi|115455115|ref|NP_001051158.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|108710889|gb|ABF98684.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549629|dbj|BAF13072.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|125587799|gb|EAZ28463.1| hypothetical protein OsJ_12444 [Oryza sativa Japonica Group]
Length = 551
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 199/541 (36%), Positives = 268/541 (49%), Gaps = 106/541 (19%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F+ L+ R P V VDN + TL+KVDS N+ G LLE+VQ+L DLDL+I ++YISSD
Sbjct: 12 DFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSD 71
Query: 73 GEWFMD---------VFHVTDQNGNKLSEDDVSERIQQSL---------GPRARSFRSLR 114
G W MD +FHVTDQ G KL++ + E IQ++L GP R L
Sbjct: 72 GGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLG 131
Query: 115 RSVGVQA--ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
VG + +E T DRPGLLS + VL+D C+V + WTH+ R A V+Y+T
Sbjct: 132 NVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVT 191
Query: 173 SEATGLPIDDPDTLA----KIKRLLLYV------LKGDRDKRSANTAVSVDSTHKERRLH 222
+ G + I+ L+ V L G+R S + V H ERRLH
Sbjct: 192 TAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVE-GRVHTERRLH 250
Query: 223 QMMYADRDYDMN----------------YAESGSASGRSKPLVTVESCTDKGYTVVNLRC 266
Q+M+ DRDY+ A + + R + V++ES ++GY VV +
Sbjct: 251 QLMHDDRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTS 310
Query: 267 PDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCL 326
DRPKLLFD VC LTDM YVV+HATV ++ P A QEYYIRH DG + S AERQ+V CL
Sbjct: 311 RDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCL 370
Query: 327 EAAIKRRTS------------------------------EGISLELCCEDRAGLLSDVTR 356
AA++RR S +G +E+ DR+GLLSD TR
Sbjct: 371 VAAVERRASHVRLIIAILHFSPVGYSYARRHGRSLTMFPQGAKVEVRAADRSGLLSDFTR 430
Query: 357 IFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL--RVKDDA 414
+ RE+GLS+ R E+ R +A+ FY+V +G V++E + +VR +G + V DA
Sbjct: 431 MLREHGLSLLRVELKRRKDEAIGTFYLVTDAGGEVRAEALHAVRARVGKVGISFEVAKDA 490
Query: 415 YSKSP---------------------------PQESGRFSLGNLFRSRSEKFLYNLGLIK 447
P QE R SLG+L S K N G IK
Sbjct: 491 PGWPPVRKTSVPAPPAEAAPAVATPAAPPAAEGQERPRSSLGSLLWSHLGKLSNNFGYIK 550
Query: 448 S 448
S
Sbjct: 551 S 551
>gi|359497228|ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
vinifera]
Length = 338
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 215/340 (63%), Gaps = 22/340 (6%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT E+TG DRPGL+SE+ AVL++L C+V A WTHNSR+A ++ + E G PI DP+
Sbjct: 1 HTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPE 60
Query: 185 TLAKIKRLLLYVLK-----GDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESG 239
L ++ L V++ G+R K TA TH +RRLHQ+M+AD+DY+
Sbjct: 61 RLVHVEEQLENVVEARHQSGERRKVRL-TAPVAGRTHTDRRLHQLMFADKDYERCCGGCD 119
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
+S R + V++E+C +KGY+VVN++ DRPKLLFD VCTLTDMQYVV+HA V ++ A
Sbjct: 120 GSSDRIQ--VSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIA 177
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFR 359
QEY+IR +DG + +E+ER RV CL AAI+RR + G+ L++ ++R GLLSD+TR+FR
Sbjct: 178 VQEYFIRQMDGCTLGTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFR 237
Query: 360 ENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSP 419
ENGLS+ AE+ G +A FYV D SG V T+E +RKEIG TI+ V + S
Sbjct: 238 ENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSL 297
Query: 420 P-------------QESGRFSLGNLFRSRSEKFLYNLGLI 446
P + RFSLG L+ S+ E+F N G I
Sbjct: 298 PASPSRDRSTASSVENRPRFSLGTLW-SQIERFSSNFGPI 336
>gi|226491840|ref|NP_001142557.1| uncharacterized protein LOC100274815 [Zea mays]
gi|195606406|gb|ACG25033.1| hypothetical protein [Zea mays]
Length = 372
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/392 (44%), Positives = 233/392 (59%), Gaps = 38/392 (9%)
Query: 77 MDVFHVTDQNGNKLSEDD-VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDR 135
MDVFHV D G K+++ + R++ SL A R + L +EL G DR
Sbjct: 1 MDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAGAGTPTL----LELVGADR 56
Query: 136 PGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLY 195
PGLLSEVFAVL DL+C + A WTH R+A++V++ E TG PIDD + +++ L +
Sbjct: 57 PGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRH 116
Query: 196 VLKGD----RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS----ASGRSKP 247
VL+G R R+ AV++D RRLHQ++ D E+GS A +
Sbjct: 117 VLRGGALGARMVRADAAAVNMD-----RRLHQLLNED-------GEAGSRADQAEAPTPT 164
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
V V+ ++GY+VV + C DRPKLLFD VCTLTD+ YVVYH T + A QE+YIR
Sbjct: 165 AVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRR 224
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
+D PISS ER+RVI CL+AAI+RR SEG+ LEL DR GLL+ VTR+FREN LSVT
Sbjct: 225 LDERPISSATERRRVIQCLQAAIERRASEGVRLELRINDRRGLLAYVTRVFRENSLSVTH 284
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGR-- 425
A +TTRG A+NVF+V D +G P +TI+ V + IG LRV ++ + + E
Sbjct: 285 AVITTRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAGR 344
Query: 426 -------FSLGNLFRSRSEKFLYNLGLIKSCS 450
FSLG+L + K L +LGLI+SCS
Sbjct: 345 GGGGAGIFSLGSLVK----KNLVSLGLIRSCS 372
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFH 81
P V V + R +++ V ++ L ++V L DLD ++ +D + F+
Sbjct: 162 TPTAVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFY 221
Query: 82 VTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSE 141
+ +L E +S S R R + L+ ++ +A+ E +EL DR GLL+
Sbjct: 222 I-----RRLDERPIS-----SATERRRVIQCLQAAIERRAS-EGVRLELRINDRRGLLAY 270
Query: 142 VFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK-IKRLLLYVLKGD 200
V V + +V A + T MA V+ ++ G P DP T+ + I+R+ L+ D
Sbjct: 271 VTRVFRENSLSVTHAVITTRGD-MAMNVFHVTDVAGRPA-DPKTIDEVIQRIGTESLRVD 328
Query: 201 RDK 203
++
Sbjct: 329 EER 331
>gi|222624567|gb|EEE58699.1| hypothetical protein OsJ_10135 [Oryza sativa Japonica Group]
Length = 369
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 170/370 (45%), Positives = 220/370 (59%), Gaps = 33/370 (8%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD- 72
+E V MN PRV VD+ ATL++V SA K G LLE V L++ + +R+ YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 73 GEWFMDVFHVTDQNGNKLSEDD-VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
G WFMDVFHVTD G K+++ D + R++ SL A R + G AA T +EL
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALP----RAAAGGPAAEGLTLLELV 125
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRP WTH R+A++V++ E TG PIDD + +I+
Sbjct: 126 GADRPASFRRA----------------WTHGGRVAALVFVRDEETGAPIDDAARVRRIES 169
Query: 192 LLLYVLKGDRDKRSANTAVSVDST--HKERRLHQMMYADRDYDMNYAESGSASGRSKPLV 249
L +VL+G R A T ++ S + +RRLHQ++ D + D A +A V
Sbjct: 170 RLRHVLRGG--ARCARTVLADPSAAGNLDRRLHQLLKEDGEADSRGAAPMTA-------V 220
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
V+ ++GY+VV + C DRPKLLFD VCTLTD+ YVVYH T + A QE+YIR D
Sbjct: 221 AVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSD 280
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
G PISSEAERQ VI CL+AAI+RR SEG+ LEL DR GLL+ VTR+FRENGLSVT AE
Sbjct: 281 GRPISSEAERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAE 340
Query: 370 VTTRGSQAVN 379
+TTR A+
Sbjct: 341 ITTRDDMAMT 350
>gi|108707165|gb|ABF94960.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 538
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/327 (48%), Positives = 205/327 (62%), Gaps = 17/327 (5%)
Query: 14 FEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD- 72
+E V MN PRV VD+ ATL++V SA K G LLE V L++ + +R+ YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 73 GEWFMDVFHVTDQNGNKLSEDD-VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
G WFMDVFHVTD G K+++ D + R++ SL A R + G AA T +EL
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALP----RAAAGGPAAEGLTLLELV 125
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
G DRPGLLSEVFAVL DL+CN + A WTH R+A++V++ E TG PIDD + +I+
Sbjct: 126 GADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIES 185
Query: 192 LLLYVLKGDRDKRSANTAVSVDST--HKERRLHQMMYADRDYDMNYAESGSASGRSKPLV 249
L +VL+G R A T ++ S + +RRLHQ++ D + D A +A V
Sbjct: 186 RLRHVLRGG--ARCARTVLADPSAAGNLDRRLHQLLKEDGEADSRGAAPMTA-------V 236
Query: 250 TVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVD 309
V+ ++GY+VV + C DRPKLLFD VCTLTD+ YVVYH T + A QE+YIR D
Sbjct: 237 AVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSD 296
Query: 310 GNPISSEAERQRVINCLEAAIKRRTSE 336
G PISSEAERQ VI CL+AAI+RR SE
Sbjct: 297 GRPISSEAERQHVIRCLQAAIERRASE 323
>gi|356565477|ref|XP_003550966.1| PREDICTED: uncharacterized protein LOC100797191 [Glycine max]
Length = 440
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 244/463 (52%), Gaps = 64/463 (13%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E E L+ R+ PPRV +DN S+R+ T++K+DSAN+ G LLE+ QVL DLDL+I ++YISSD
Sbjct: 12 EIESLIERIYPPRVCIDNDSSRECTVVKIDSANRHGILLEMAQVLTDLDLVISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALE-----HTT 127
G W MDVFHVTDQ+GNKL++ + IQQ+L S + + + + + E +
Sbjct: 72 GGWLMDVFHVTDQDGNKLTDVGLVHYIQQALCESRSSNKEISSDIELTSCNEPPRVVNLA 131
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IELT D+ G+ SE+ AVL L NV A WTHN R+A ++++ PI + + LA
Sbjct: 132 IELTTTDKHGMFSEISAVLLGLGFNVTSATAWTHNDRVACIIHLEDANKLGPI-NAERLA 190
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSV-------DSTHKERRLHQMMYADRDYDMNYAESGS 240
+++ L V+K K + V + H ERRLHQMMYAD DY+ A G
Sbjct: 191 QVQAQLQNVVKARDGKNGEDDRVRLRLRSFGGGRNHTERRLHQMMYADGDYERLRACHGE 250
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
G V+V KGY VVN+R DRPKL FD VC LTDMQY V+HA V + A
Sbjct: 251 -KGCEGTNVSVGRYEVKGYWVVNVRSRDRPKLFFDTVCVLTDMQYEVFHAAVSSNGSMAD 309
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRE 360
Q G+ +++ E+ GLLS VTR+ RE
Sbjct: 310 Q-----------------------------------GLKVDIRAENTTGLLSKVTRVIRE 334
Query: 361 NGLSVTRAEVTTRGSQ-AVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAY---- 415
NGLS+T+ ++ G + AV F+V ++SG + E VR++IG +++ + Y
Sbjct: 335 NGLSITKVQIGVEGDEMAVGSFHVANSSGQELNPNIAELVRRQIGGSVVANNNSPYRVPK 394
Query: 416 ----------SKSPPQESGRFSLGNLFRSRSEKFLYNLGLIKS 448
+KS RFS G++ S+ + N I+S
Sbjct: 395 SLSTSKTMHETKSSRDVRPRFSTGSMLWSQIKCLSNNFRPIRS 437
>gi|297742910|emb|CBI35746.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 204/326 (62%), Gaps = 22/326 (6%)
Query: 139 LSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
+SE+ AVL++L C+V A WTHNSR+A ++ + E G PI DP+ L ++ L V++
Sbjct: 1 MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLVHVEEQLENVVE 60
Query: 199 -----GDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
G+R K TA TH +RRLHQ+M+AD+DY+ +S R + V++E+
Sbjct: 61 ARHQSGERRKVRL-TAPVAGRTHTDRRLHQLMFADKDYERCCGGCDGSSDRIQ--VSIEN 117
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
C +KGY+VVN++ DRPKLLFD VCTLTDMQYVV+HA V ++ A QEY+IR +DG +
Sbjct: 118 CKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQMDGCTL 177
Query: 314 SSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTR 373
+E+ER RV CL AAI+RR + G+ L++ ++R GLLSD+TR+FRENGLS+ AE+
Sbjct: 178 GTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIH 237
Query: 374 GSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPP------------- 420
G +A FYV D SG V T+E +RKEIG TI+ V + S P
Sbjct: 238 GERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPSRDRSTASSV 297
Query: 421 QESGRFSLGNLFRSRSEKFLYNLGLI 446
+ RFSLG L+ S+ E+F N G I
Sbjct: 298 ENRPRFSLGTLW-SQIERFSSNFGPI 322
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
+V+++N + +++ V S ++ L + V L D+ ++ A +SS G + + +
Sbjct: 112 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 171
Query: 85 QNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFA 144
+G L + R+ Q L ++ R V +++ ++R GLLS++
Sbjct: 172 MDGCTLGTESERNRVAQCL------IAAIERRV-----THGLRLDIRIKNRLGLLSDITR 220
Query: 145 VLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
V + ++ AE+ H R + Y+T + +G + P+T+ I++
Sbjct: 221 VFRENGLSIRMAEIGIHGERASGSFYVT-DVSGRDV-SPNTVELIRK 265
>gi|414872600|tpg|DAA51157.1| TPA: hypothetical protein ZEAMMB73_416104 [Zea mays]
Length = 390
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 204/354 (57%), Gaps = 31/354 (8%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
+F+ L+ R P V VDN + TL+KVDS N+ G LLE+VQ+L DLDL+I ++YISSD
Sbjct: 12 DFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSD 71
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL--------GPRARSFRSLRRSVGVQAA-- 122
G W MDVFHVTDQ G KL++ + E IQ++L GP R L VG
Sbjct: 72 GGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCLGNVVGPGGPDV 131
Query: 123 LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
+E T DRPGLLS + +VL+D C+V + WTHN R A V+Y+T A G +
Sbjct: 132 SGCAALEFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGGAALL- 190
Query: 183 PDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS-----THKERRLHQMMYADRDYDMNYAE 237
P A+I+RL+ V+ + V V H ERRLHQ+M+ DRDY+ A
Sbjct: 191 PGRCARIERLVNAVVDARENVTGERHWVRVSEPAQGRVHTERRLHQLMHDDRDYESGPAP 250
Query: 238 S---------------GSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTD 282
+ + R+ V+++S ++GY VV + DRP+LLFD VC LTD
Sbjct: 251 TPVDEDLFSVGEKAATARTARRAVTRVSIDSWEERGYAVVKMTSRDRPRLLFDTVCALTD 310
Query: 283 MQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
MQYVV+HATV ++ P A QEYYIRH DG + + AERQ+V CL AA++RR +
Sbjct: 311 MQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDNSAERQKVSRCLVAAVERRATH 364
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 65/169 (38%), Gaps = 31/169 (18%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYV---------------VYHAT 291
P V V++ T + T+V + +R +L + V LTD+ V V+H T
Sbjct: 23 PGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSDGGWLMDVFHVT 82
Query: 292 -------VIAESPEAYQEYYI-RHVDGNPISSEAERQRVINCLEAAIKRR---TSEGISL 340
PE Q + H GN S R CL + S +L
Sbjct: 83 DQIGRKLTDPSLPEFIQRALVPTHRPGNGPSP-----RFTTCLGNVVGPGGPDVSGCAAL 137
Query: 341 ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
E DR GLLS +T + +NG V + T +A V YV D +G
Sbjct: 138 EFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGG 186
>gi|388512679|gb|AFK44401.1| unknown [Lotus japonicus]
Length = 224
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/229 (60%), Positives = 168/229 (73%), Gaps = 7/229 (3%)
Query: 224 MMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDM 283
MM+ADRDY+ + + +P VTV + +DK Y+VV + DRPKLLFD VCTLTDM
Sbjct: 1 MMFADRDYER--VDDDDFDEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDM 58
Query: 284 QYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELC 343
QYVV+HA + AE P+AYQEYYIRH+DG+P+ S+AERQRVI CLEAAI+RR SEG+ LELC
Sbjct: 59 QYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELC 118
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEI 403
DR GLLS+VTRIFREN L+VTRAEVTT+G +AVN FYV ASG V S+TIES+R+ I
Sbjct: 119 TTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIESIRQAI 178
Query: 404 GLTILRVKDDAYS-KSPPQESGRFSL-GNLFRSRSEKFLYNLGLIKSCS 450
G TIL+VK KS Q+S SL LF+SRS N GL+KS S
Sbjct: 179 GNTILKVKGTPDELKSTHQDSPTRSLFSGLFKSRS---FVNFGLVKSYS 224
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VTV N S++ +++ + S ++ L + V L D+ ++ A I ++G +++
Sbjct: 22 PNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIR 81
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVF 143
+G+ + D +R+ Q L ++ R V E +EL DR GLLS V
Sbjct: 82 HIDGSPVKSDAERQRVIQCLEA------AIERRVS-----EGLKLELCTTDRVGLLSNVT 130
Query: 144 AVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDK 203
+ + V AEV T + + Y+ S A+G +D T+ I++ + G+
Sbjct: 131 RIFRENSLTVTRAEVTTKGDKAVNTFYV-SGASGYLVDSK-TIESIRQAI-----GNTIL 183
Query: 204 RSANTAVSVDSTHKE---RRLHQMMYADRDY 231
+ T + STH++ R L ++ R +
Sbjct: 184 KVKGTPDELKSTHQDSPTRSLFSGLFKSRSF 214
>gi|2827701|emb|CAA16674.1| predicted protein [Arabidopsis thaliana]
Length = 446
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 202/347 (58%), Gaps = 30/347 (8%)
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
+ EHT E+TG +RPGLLSE+ AVLSD+ C+V A WTH+ R A V+Y+ G P
Sbjct: 96 HVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGP 155
Query: 180 IDDPDTLAKIKRLLLYVLK-----GDRDKRSANT----AVSVDSTHKERRLHQMMYADRD 230
I DP A++K L V++ GD V V H ERRLH++MY + D
Sbjct: 156 IIDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGD 215
Query: 231 YDMNYAESGSASGRSKPL---------VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLT 281
Y+ N + R L VT+E+C GY++VN++C DRPKLLFD VC L
Sbjct: 216 YE-NCFDCDCFGDRCDALWRGRCERIHVTIEACN--GYSMVNVKCRDRPKLLFDTVCALK 272
Query: 282 DMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLE 341
++Q+VV+HA A+ A QEY+IR +G + +E +R+R+ +CL AAI RR S+G+ LE
Sbjct: 273 ELQFVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLE 332
Query: 342 LCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRK 401
+ E++ GLLSDVTR+ RENGLS+TRAE+ T+G AV FYV D +G +E+V +
Sbjct: 333 IRTENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVR 392
Query: 402 EIGLTILRV---------KDDAYSKSPPQESGRFSLGNLFRSRSEKF 439
E+G ++ + + S S Q+ + S+G +F S+ E+
Sbjct: 393 ELGGAVVSAVKGVGMMPRRIGSTSDSVEQDKAKSSIGRMFWSKLERL 439
>gi|388519119|gb|AFK47621.1| unknown [Lotus japonicus]
Length = 262
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 166/235 (70%), Gaps = 10/235 (4%)
Query: 214 STHKERRLHQMMYADRDYDMNYAESGSASGRS----KPLVTVESCTDKGYTVVNLRCPDR 269
STH +RRLHQM++ADRDY+ + + +P + +E C +KGY+ V+++C DR
Sbjct: 29 STHMDRRLHQMLFADRDYERASVTTTTPDVDCPLSFRPKIEIERCGEKGYSAVSVKCKDR 88
Query: 270 PKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA 329
KL+FD VCTLTDMQYVV+HAT+ +E P A QEY+IRH+DG + +E E++RV C+EAA
Sbjct: 89 AKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGCTLDTEGEKERVTKCIEAA 148
Query: 330 IKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
I+RR SEG+SLELC +DR GLLS+VTRI RE+GL+V RA V+T G + +NVFYV DA GN
Sbjct: 149 IQRRVSEGVSLELCAKDRVGLLSEVTRILREHGLTVCRAGVSTVGEKGLNVFYVRDAYGN 208
Query: 390 PVKSETIESVRKEIGLTIL----RVKDDAYSKSPPQESGRFSLGNLFRSRSEKFL 440
PV + IE++RKEIG T++ RV +A K+P + G + F + E+FL
Sbjct: 209 PVDMKIIEALRKEIGQTVMVNVKRVPTNA--KAPAETRGWAKISFFFGNLLERFL 261
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P++ ++ + + + V ++ + ++V L D+ ++ A ISS+G + + +
Sbjct: 66 PKIEIERCGEKGYSAVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIR 125
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVF 143
+G L + ER+ + + +++R V E ++EL +DR GLLSEV
Sbjct: 126 HMDGCTLDTEGEKERVTKCIEA------AIQRRVS-----EGVSLELCAKDRVGLLSEVT 174
Query: 144 AVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+L + V A V T + +V Y+ +A G P+D
Sbjct: 175 RILREHGLTVCRAGVSTVGEKGLNVFYV-RDAYGNPVD 211
>gi|357476531|ref|XP_003608551.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
gi|355509606|gb|AES90748.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
Length = 375
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/309 (44%), Positives = 180/309 (58%), Gaps = 16/309 (5%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E E L R++PPRV +DN S R T++K+D ANK G LLE+VQ L DLDLII ++YISSD
Sbjct: 31 EIESLKERIHPPRVCIDNDSCRNCTVVKIDRANKHGILLEMVQALTDLDLIISKSYISSD 90
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALE-----HTT 127
G W MDVFHV DQ GNKL++ + I+Q L S VQ + +
Sbjct: 91 GGWLMDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQHCCKGPQEANVA 150
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
IE+ G DRPGL SE+ VL DL N++ A+ WTHN ++ ++Y + PI++ + LA
Sbjct: 151 IEVIGTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPEDASRPGPINERERLA 210
Query: 188 KIKRLLLYVL-----KGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMNYAESGSA 241
++ + V+ KGD+D RS S +H ERRLHQMMYA DY+ +A G
Sbjct: 211 QVVDQIRNVIEANEGKGDKDMRSVVLKSSTTGHSHTERRLHQMMYAASDYESCHACHGDN 270
Query: 242 SGRSK-----PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAES 296
K V+V+ + Y VVN+R DRPKLLFD VC LTDMQY V+HA V + S
Sbjct: 271 DSEHKRQYDGTHVSVDRYQGRDYWVVNVRSRDRPKLLFDIVCMLTDMQYEVFHAAVTSNS 330
Query: 297 PEAYQEYYI 305
P A Q + I
Sbjct: 331 PMAEQVHRI 339
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V +++ + + TVV + ++ +L + V LTD+ ++ + + ++ ++++
Sbjct: 42 PRVCIDNDSCRNCTVVKIDRANKHGILLEMVQALTDLDLIISKSYISSDGGWLMDVFHVK 101
Query: 307 HVDGNPISSEAERQRV--INCLEAAIKRRTSEGISLELCCE--------------DRAGL 350
GN ++ ++ + I C A + +++ CC+ DR GL
Sbjct: 102 DQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQHCCKGPQEANVAIEVIGTDRPGL 161
Query: 351 LSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
S+++ + + G ++ A+ T + V + Y DAS
Sbjct: 162 FSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPEDAS 198
>gi|384244797|gb|EIE18295.1| hypothetical protein COCSUDRAFT_10349, partial [Coccomyxa
subellipsoidea C-169]
Length = 385
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 225/392 (57%), Gaps = 14/392 (3%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
++E L LR+NP ++ +DN S+ T I++DSAN G+L+E+VQ + L+L IRRA ISSD
Sbjct: 1 DYEALELRINPTQIEIDNDSDDLVTRIELDSANYPGTLVEVVQYMLGLNLQIRRARISSD 60
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAA---LEHTTIE 129
WF DVF VT+ NG K+ + +++ L S ++G + A E T +E
Sbjct: 61 RSWFHDVFEVTEVNGEKVRNTRKLDFLKRMLNIEEEGIFSNAGAMGHEGASGPTESTVVE 120
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189
L G D+ G L++V +L++ CNV A VWT+ R+A V+ + + G PI D L +
Sbjct: 121 LAGPDKAGKLAQVTRLLTNNGCNVRSAAVWTYYGRVAFVLSVLEK--GKPIADQVKLQGL 178
Query: 190 KRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYAD--RDYDMNYAESGSASGRSKP 247
++++L ++ + + S H +R LHQMM A+ R +D +++ + + R KP
Sbjct: 179 RQIMLDIMGPEGEGISGVHVQHSGVVHHDRTLHQMMLAEDSRAWDQSHS---THAARLKP 235
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQEYYI 305
+++ C GY ++++ C DR KLLFD VCTL DM+Y VYH T I P+ A QEYY
Sbjct: 236 NISIVQCRHTGYWLISIACKDRNKLLFDTVCTLADMEYDVYHGT-INSHPDGSATQEYYA 294
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSV 365
+ G P + A +++ LEA+I+RR +G+ L + D G L+ +T + R+ GL++
Sbjct: 295 KPRWGRPWDARAA-EKLAAMLEASIQRRFPKGLKLHVHSVDSFGSLATLTGVLRDAGLTI 353
Query: 366 TRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
RA+ + + + FYV+DASG + +E
Sbjct: 354 NRAKTNSANNVCGHTFYVMDASGAAPERAAVE 385
>gi|343172210|gb|AEL98809.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 118/130 (90%), Gaps = 1/130 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCW S V DEF+K VLRMNPPRVTVDN S+R TLIKVDSANKRGSLLE+VQVLND+
Sbjct: 1 MDCWMQSLKVDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDM 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+L IRRAYISSDGEWFMDVFHVTDQ+GNKLSEDDV+ERIQQSLGPR RSFRS +RSVGVQ
Sbjct: 61 NLHIRRAYISSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRTRSFRS-KRSVGVQ 119
Query: 121 AALEHTTIEL 130
+A+EHTTIEL
Sbjct: 120 SAVEHTTIEL 129
>gi|343172212|gb|AEL98810.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 117/130 (90%), Gaps = 1/130 (0%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL 60
MDCW S V DEF+K VLRMNPPRVTVDN S+R TLIKVDSANKRGSLLE+VQVLND+
Sbjct: 1 MDCWMQSLKVDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDM 60
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+L +RRAYISSDGEWFMDVFHVTDQNGNKLSEDDV+ERIQQSLGPR SFRS +RSVGVQ
Sbjct: 61 NLHVRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVAERIQQSLGPRTCSFRS-KRSVGVQ 119
Query: 121 AALEHTTIEL 130
+A+EHTTIEL
Sbjct: 120 SAVEHTTIEL 129
>gi|159463310|ref|XP_001689885.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283873|gb|EDP09623.1| predicted protein [Chlamydomonas reinhardtii]
Length = 580
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 214/452 (47%), Gaps = 72/452 (15%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L LR++PP V VDN S TLI +DSAN+ G+L+E+VQ+L +L L + +A ISSD
Sbjct: 122 EYETLELRVHPPNVVVDNESYSDRTLITLDSANRPGTLVEVVQLLTELGLCVTKARISSD 181
Query: 73 GEWFMDVFHVTDQNGNKLSED-DVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
G WF+D FHVTD LS D D + +G V +A+ T EL
Sbjct: 182 GGWFVDEFHVTDAGKKVLSVDTDPGSDAEADVG------------VFEEASQCSTVFELA 229
Query: 132 GRDRPGLLSEVFAVLSDLKC--------NVMGAEVWTHNSRMASVVYI------------ 171
G DR GLL+EV A+L + C V A VWTHN R+A V+ +
Sbjct: 230 GNDRIGLLAEVIALLKNNGCEVGPGAWGQVRSAAVWTHNHRVAFVISVLEASASATAGAV 289
Query: 172 -------TSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQM 224
PI D LA++++LLL ++ N A + H ERRLHQ+
Sbjct: 290 AAPAPGGGVGGGSCPIKDGIKLARLRQLLLGMMDPSGQDSVVNVATTKGLIHYERRLHQL 349
Query: 225 MYAD------RDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVC 278
+ + R ++ A + KP V+++ Y ++++RC DR KLLFD VC
Sbjct: 350 LLKEEEAQWRRAGELAAAYEAELAELQKPEVSIQHTKQHNYWMISIRCRDRQKLLFDTVC 409
Query: 279 TLTDMQYVVYHATVIAESPE----------AYQEYYIRHVDGNPISSEAERQRVINCLEA 328
TL D+ Y VYH V E A Q +Y+R G+ + ++ LE
Sbjct: 410 TLADLNYDVYHGAVDCEVERERAHGQPLSIAVQTFYLRPRFGDCVWDAKRAAKLKYMLEV 469
Query: 329 AIKRRTSEGISLELCCEDRAGL---------------LSDVTRIFRENGLSVTRAEV-TT 372
AI+RR G + + + L +T ++R+ GL ++RA+V
Sbjct: 470 AIQRRQPTGTKVHISGVPASAAAAASGAGGGGGATSDLPALTAVWRDFGLCISRAKVRAL 529
Query: 373 RGSQAVNVFYVVDASGNPVKSETIESVRKEIG 404
G+ + FY+VD +G P +++ ++IG
Sbjct: 530 AGAAGEHTFYLVDRNGLPPADTVVQAACQQIG 561
>gi|125590195|gb|EAZ30545.1| hypothetical protein OsJ_14593 [Oryza sativa Japonica Group]
Length = 397
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 188/340 (55%), Gaps = 28/340 (8%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
DE+ KLV MNPPRV VDN + +AT+I+VDS + G+LL +VQV+ DL L+IR+AY SS
Sbjct: 16 DEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFSS 75
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT 131
DG WFMDVF+VTD++GNK+ +D IQ +L + +R +VG+ A E+T IELT
Sbjct: 76 DGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIELT 135
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE-ATGLPIDDPDTLAKIK 190
G DRPGLLSEV AVL+ ++C V AE+WTHN+R+A+VV++T + +G I+D +A I
Sbjct: 136 GTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADIS 195
Query: 191 RLLLYVLKG-------------DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAE 237
L +L+G D + AVS + + + + + D D + AE
Sbjct: 196 TRLGNLLRGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEAE 255
Query: 238 SGSASGRSKPLVTVESCTDKGYT---VVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
R + + +E+ ++ + +R DR LL D + + A + +
Sbjct: 256 ------RQRVVQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISS 309
Query: 295 ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRT 334
E EA +Y+ G+P+ + + I+ + A I T
Sbjct: 310 ERGEAVDTFYLSDPQGHPVEA-----KTIDAIRAQIGEAT 344
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 130/189 (68%), Gaps = 15/189 (7%)
Query: 272 LLFDAVCTLTDMQYVVYHATVIAES-PEAYQEYYIRHVDGNPISSEAERQRVINCLEAAI 330
LLFD VCT+TDM YV++H V +E AYQEYYIRHVDG+P+ SEAERQRV+ CLEAAI
Sbjct: 208 LLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEAERQRVVQCLEAAI 267
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
+RRT++G++LE+ DRAGLLSDVTRIFRENGL++ RAE+++ +AV+ FY+ D G+P
Sbjct: 268 ERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSERGEAVDTFYLSDPQGHP 327
Query: 391 VKSETIESVRKEIGLTILRVKDDAYSKSPPQE------------SGRFSLGNLFRSRSEK 438
V+++TI+++R +IG LRVK + ++ S F GNLF+ +
Sbjct: 328 VEAKTIDAIRAQIGEATLRVKHNPFADGDGAGGGGGGATDDVAGSTAFLFGNLFKFY--R 385
Query: 439 FLYNLGLIK 447
N LIK
Sbjct: 386 PFQNFSLIK 394
>gi|326507160|dbj|BAJ95657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 143/243 (58%), Gaps = 20/243 (8%)
Query: 79 VFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQA----ALEHTTIELTGRD 134
VFHV DQ GNK+ I+Q++ R ++ RS + + A +T IE+ G +
Sbjct: 18 VFHVRDQEGNKVYSKKAINYIEQAICTRDSGRFTVTRSNELASKPDVATHYTGIEMIGHN 77
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLL 194
RPG+ SE+ AVL++ CNVM A W+H +A V +++ E+T I+DPD LA I+ L
Sbjct: 78 RPGIFSEISAVLAEQGCNVMEAHAWSHKDSLACVAFVSDESTSTRINDPDRLASIQDHLC 137
Query: 195 YVLKG----DRDKRSANTAV-SVD--STHKERRLHQMMYADRDYDMNYAESGSA------ 241
VL D D R A + VD ++H ERRLHQ+M+A +D+D + +A
Sbjct: 138 TVLGPGTSVDEDGRRARAHLLGVDGLTSHPERRLHQLMFASKDFDGQPGQVSAAFPMLSL 197
Query: 242 ---SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
S+ +V+V+ C +KGY+V+++ C DRPKL+FD VCTLTDMQ+ V+HA+V + P
Sbjct: 198 DGYKKGSRTVVSVDRCNEKGYSVISVECVDRPKLMFDTVCTLTDMQFDVFHASVSSCGPF 257
Query: 299 AYQ 301
A Q
Sbjct: 258 ACQ 260
>gi|222640928|gb|EEE69060.1| hypothetical protein OsJ_28067 [Oryza sativa Japonica Group]
Length = 314
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 120/168 (71%), Gaps = 18/168 (10%)
Query: 1 MDCWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIK--------VDSANKRGSLLE 52
M C S S VVDEFEKLV+RMNPPRVTVDNTS+ ATL+K VDSANK G+LLE
Sbjct: 1 MACGSPSTEVVDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLE 60
Query: 53 LVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS 112
+VQVL +L L I+RAYISSDGEWFMD + NKL + V +RI+ SLG + SFR+
Sbjct: 61 VVQVLTELKLTIKRAYISSDGEWFMDGW-------NKLYDGLVIDRIELSLGAGSLSFRA 113
Query: 113 -LRRSV--GVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAE 157
RSV +AA T IEL G+DRPGLLSEVFAVL+DLKCN++ +E
Sbjct: 114 PPERSVELEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSE 161
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 92/131 (70%), Gaps = 10/131 (7%)
Query: 268 DRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLE 327
DRP LL + LTD++ + + +EYYIRH+D +P++S ER R+ CLE
Sbjct: 138 DRPGLLSEVFAVLTDLKCNIVSS----------EEYYIRHLDDSPVTSGDERDRLGRCLE 187
Query: 328 AAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
AAI+RR +EG+ LEL CEDR GLLSDVTRIFRE+GLSVT AEV TRG++A NVFYVV AS
Sbjct: 188 AAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAAS 247
Query: 388 GNPVKSETIES 398
G PV++ E
Sbjct: 248 GEPVEAHAREG 258
>gi|294460772|gb|ADE75960.1| unknown [Picea sitchensis]
Length = 178
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 119/190 (62%), Gaps = 13/190 (6%)
Query: 262 VNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQR 321
+ ++ ++ +L D V L D ++ A + ++ +++ DGN ++ E
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEG---- 56
Query: 322 VINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVF 381
+I+ ++ +G LELC D+ G LSD TRIFRENGLSVTRA++T+R + V+VF
Sbjct: 57 LIDHIQ--------QGTRLELCRTDQIGPLSDATRIFRENGLSVTRADITSRDEKGVDVF 108
Query: 382 YVVDASGNPVKSETIESVRKEIGLTILRVKDDA-YSKSPPQESGRFSLGNLFRSRSEKFL 440
YV D +GN V S+T+E++R+EIG L+VK+ + + S PQES FS G+LF+S+SE+FL
Sbjct: 109 YVTDVAGNFVDSKTVEAIRQEIGKRALQVKESSMHVDSSPQESSAFSFGDLFKSQSERFL 168
Query: 441 YNLGLIKSCS 450
YN+G KS S
Sbjct: 169 YNIGFKKSDS 178
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 30/180 (16%)
Query: 39 IKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSER 98
+++ SANK G LL++VQVL D DL+I +AYISSDG W MDVFHVTD +GNK++++ + +
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 99 IQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEV 158
IQQ T +EL D+ G LS+ + + +V A++
Sbjct: 61 IQQG-----------------------TRLELCRTDQIGPLSDATRIFRENGLSVTRADI 97
Query: 159 WTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKE 218
+ + + V Y+T A D T+ I++ + G R + +++ VDS+ +E
Sbjct: 98 TSRDEKGVDVFYVTDVAGNFV--DSKTVEAIRQEI-----GKRALQVKESSMHVDSSPQE 150
>gi|302841007|ref|XP_002952049.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
gi|300262635|gb|EFJ46840.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
Length = 735
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 132/236 (55%), Gaps = 34/236 (14%)
Query: 9 AVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAY 68
V+ E+E L LR++PP V +DN + TLI +DSAN+ G+L+E+VQ+L +L L + +A
Sbjct: 41 GVLLEYETLELRVHPPNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKAR 100
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSV----------- 117
ISSDG WF+D F VTD G K++ + R R++R+ +
Sbjct: 101 ISSDGGWFVDEFSVTDA-GKKVTNE--------------RKLRAIRKVLSVDADPGSDNE 145
Query: 118 -GVQAALEH-----TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
GV +A E T EL G DR GLL++V +L C V A VWTHN R A V+ +
Sbjct: 146 SGVDSAFEEASQCSTLFELAGNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISV 205
Query: 172 TSEATGLPIDDPDTLAKIKRLLLYVL--KGDRDKRSANTAVSVDSTHKERRLHQMM 225
+TGLPI D LA++++LLL ++ GD + N + + H ERRLHQ++
Sbjct: 206 LDCSTGLPIKDNIKLARLRQLLLNMMHTPGDVAESVVNVSNTKGLIHYERRLHQLL 261
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE------- 298
KP V V+ + Y +VN+RC DR KLLFD VCTL D+ Y VYH V E
Sbjct: 504 KPEVFVQHSKQRDYWMVNIRCRDRQKLLFDTVCTLADLNYDVYHGAVDCELDRDKAGAKV 563
Query: 299 --AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGL------ 350
A Q +Y+R G+ + ++ LE AI+RR +G + + +G
Sbjct: 564 SIAVQTFYMRPRYGDAYWDPRKAAKLKYMLECAIQRRQPQGTKVHIQGAPSSGSGGSGGA 623
Query: 351 ----LSDVTRIFRENGLSVTRAEV-TTRGSQAVNVFYVVDASGNPVKSETIESVRKEIG 404
L +T ++R+ GL +TRA+V GS + FY+VD G P ++ ++IG
Sbjct: 624 PAADLPALTAVWRKFGLCITRAKVRALAGSAGEHTFYLVDNFGRPPAEAVVQQACQQIG 682
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V +++ T T++ L +RP L + V LT++ V A + ++ E+ +
Sbjct: 56 PNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSDGGWFVDEFSVT 115
Query: 307 HVDGNPISSEAERQRVINCL--------------EAAIKRRTSEGISLELCCEDRAGLLS 352
G +++E + + + L ++A + + EL DR GLL+
Sbjct: 116 DA-GKKVTNERKLRAIRKVLSVDADPGSDNESGVDSAFEEASQCSTLFELAGNDRIGLLA 174
Query: 353 DVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS-GNPVKSETIESVRKEIGLTILRVK 411
DV + + NG V A V T + V V+D S G P+K + +++ L ++
Sbjct: 175 DVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLARLRQLLLNMMHTP 234
Query: 412 DD 413
D
Sbjct: 235 GD 236
>gi|255646078|gb|ACU23526.1| unknown [Glycine max]
Length = 135
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 98/138 (71%), Gaps = 9/138 (6%)
Query: 308 VDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
+DG + ++ E++RVI +EAAI+RR SEG+SLELC +DR GLLS+VTRI RENGL+V R
Sbjct: 1 MDGCTLDTQGEKERVIQRIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCR 60
Query: 368 AEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL-RVKDDAYSKSPPQESG-- 424
A V+TRG QA+NVFYV DASGNPV +T+E++RKEIG T++ VK + P+ G
Sbjct: 61 AGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAPETRGWA 120
Query: 425 --RFSLGNLFRSRSEKFL 440
F GNL E+FL
Sbjct: 121 KTSFFFGNLL----ERFL 134
>gi|343173273|gb|AEL99339.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 71/81 (87%)
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
GRDRPGLLSE+FAVL+D KCNV+ +EVWTHNSRMASVVYIT EATG PIDDP LA I+
Sbjct: 1 GRDRPGLLSEIFAVLADHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 192 LLLYVLKGDRDKRSANTAVSV 212
LLL VL GDRDKRSANTAVSV
Sbjct: 61 LLLSVLMGDRDKRSANTAVSV 81
>gi|343173271|gb|AEL99338.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 71/81 (87%)
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
GRDRPGLLSE+FAVL+D KCNV+ +EVWTHNSRMASVVYIT EATG PIDDP LA I+
Sbjct: 1 GRDRPGLLSEIFAVLTDHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 192 LLLYVLKGDRDKRSANTAVSV 212
LLL VL GDRDKRSANTAVSV
Sbjct: 61 LLLSVLMGDRDKRSANTAVSV 81
>gi|241865260|gb|ACS68708.1| amino acid binding protein [Sonneratia alba]
gi|241865493|gb|ACS68779.1| amino acid binding protein [Sonneratia alba]
Length = 129
Score = 135 bits (341), Expect = 3e-29, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 92/129 (71%), Gaps = 5/129 (3%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD-VFHVTD 84
V++DNTS TLIKVDS NK G LLE+VQ+L DLDLII +AY+SSDG WFMD VFH TD
Sbjct: 1 VSIDNTSCTDCTLIKVDSMNKPGILLEVVQILADLDLIITKAYVSSDGGWFMDAVFHATD 60
Query: 85 QNGNKLSEDDVSERIQQSLGPRARSFRSLR----RSVGVQAALEHTTIELTGRDRPGLLS 140
Q GNK+++ + I++ LGP ++ + VG+ + ++T IELTG+DRPGLLS
Sbjct: 61 QQGNKITDRKTIDYIEKVLGPNGHLTDRIKMWPGKRVGIHSIGDYTAIELTGKDRPGLLS 120
Query: 141 EVFAVLSDL 149
E+ AVL+ L
Sbjct: 121 EISAVLAGL 129
>gi|12323212|gb|AAG51584.1|AC011665_5 unknown protein, 3' partial [Arabidopsis thaliana]
Length = 104
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 82/96 (85%)
Query: 12 DEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS 71
+E+EKL+ RMNPPRV +DN S +KAT+I+VDSAN+ G LLE+VQ+L DL+L I +AYISS
Sbjct: 9 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 68
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRA 107
DG WFMDVF+VTDQ+GNK++++ V + IQ+SLGP A
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA 104
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 349 GLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETI-ESVRKEIG 404
G+L +V +I + L++T+A +++ G ++VF V D GN V E + + ++K +G
Sbjct: 45 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 101
>gi|307103237|gb|EFN51499.1| hypothetical protein CHLNCDRAFT_59210 [Chlorella variabilis]
Length = 997
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 124/233 (53%), Gaps = 26/233 (11%)
Query: 17 LVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF 76
L LR++PP + +DN ++ K T + +DSAN+ GSL+ +VQ +LDL I A ISSDG WF
Sbjct: 460 LELRVHPPTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWF 519
Query: 77 MDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSL---RRSVGVQAALEHTTIELTGR 133
+DVFH+++ NG K+ + I+Q L + L +E T EL G
Sbjct: 520 VDVFHLSEPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGP 579
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
DRPGLL+EV +L+ CNV A VWT+ R+A V+ IT + GLP+ D L ++++L+
Sbjct: 580 DRPGLLAEVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITEK--GLPVVDGIKLQRLRQLV 637
Query: 194 LYVL---KGDRDKRSANTAVSVDST------------------HKERRLHQMM 225
L ++ G D A A+ H +RRLHQ+M
Sbjct: 638 LGIMTRRPGPSDSNGALAAMGGGGLGPGSAGVIVNIRKVRGEIHHDRRLHQLM 690
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 326 LEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGS--QAVNVFYV 383
LE++I+RR +G+ + + DR G L+ +TR+ + GLSVTRA+V T + + + FYV
Sbjct: 828 LESSIQRRFPKGLKVHVHSLDRFGCLAALTRVLHQTGLSVTRAKVRTYATSKSSGHTFYV 887
Query: 384 VDASGNPVKSETIESVRKEIGLTILRVKDDAYSKSPPQESGRFSLGNLFRSRSEKFLYNL 443
+DA G P +E+ +EIG ++ +A S S S RFS F +R+ + +
Sbjct: 888 MDARGGPPDKARVEAACREIGGQLVEAGQEARSSS--LGSHRFSFS--FLARNWNSAWGI 943
Query: 444 GLI 446
G I
Sbjct: 944 GHI 946
>gi|302819653|ref|XP_002991496.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
gi|300140698|gb|EFJ07418.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
Length = 109
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 78/113 (69%), Gaps = 12/113 (10%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
LELC +DR GLLSDVTRIFRENGLSVTRA+V+T+G +AVNVFYV DASGNPV +E+
Sbjct: 2 LELCTKDRVGLLSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEAT 61
Query: 400 RKEIGLTILRVKDDAYSKSPPQE----SGRFSLGNLFRSRSEKFLYNLGLIKS 448
RKEIG +IL+VKD S Q RFS G FLY+LGLI S
Sbjct: 62 RKEIGQSILQVKDLTPSSPNSQHEVASKSRFSFGT--------FLYSLGLINS 106
>gi|159483207|ref|XP_001699652.1| hypothetical protein CHLREDRAFT_186726 [Chlamydomonas reinhardtii]
gi|158281594|gb|EDP07348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 756
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 24/195 (12%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L LR++PP V +DN + T+I +DSAN+ G+L+E+VQ L +L L IR A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNETYEDVTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT----- 127
G WF+D F VT+ K+ + R +R+ + ++ E T
Sbjct: 105 GGWFVDEFFVTETPKGKILDQ--------------RKINIIRKVLSIETDAERTARDKEL 150
Query: 128 ---IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
EL GRDR GLL+ V +L C V+ A VWT + R+A V+ T G P+ DP
Sbjct: 151 CTVFELAGRDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPP 208
Query: 185 TLAKIKRLLLYVLKG 199
L +++++L +L G
Sbjct: 209 KLDRLEQILYDMLGG 223
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 239 GSASGRSKPL----VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
G A+ + PL V ++ T Y +V +RC DR KL FD VCTL DM Y +YHAT+ +
Sbjct: 537 GGAADQLAPLRRSEVRIQHSTLLNYWLVTIRCRDRNKLFFDTVCTLADMNYDIYHATIDS 596
Query: 295 ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDV 354
E A Q +Y+R G + E ++ LE+A++RR G + + DR+ L++ +
Sbjct: 597 EGDAASQLFYVRPRYGECVWDERRAAKLRYMLESAVQRRFPRGTKVCVQSGDRSSLVA-L 655
Query: 355 TRIFRENGLSVTRAEVTTRGS-QAVNVFYVVDASGNPVKSETIESVRKEIG 404
G +TRA+V G AV F + D G + ++ + + +G
Sbjct: 656 FSALSSGGFWITRADVRAHGHDNAVFEFTITDTRGQLPEQTHVQRICEAVG 706
>gi|302850060|ref|XP_002956558.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
gi|300258085|gb|EFJ42325.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
Length = 763
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 109/191 (57%), Gaps = 11/191 (5%)
Query: 13 EFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD 72
E+E L LR++PP V +DN + T+I +DSAN+ G+L+E+VQ L +L L IR A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNDTYDDMTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLR-RSVGVQAALEHTTIELT 131
G WF+D F VT+ KL + I++ L + S S + + + T EL
Sbjct: 105 GGWFVDEFFVTETPKGKLLDPRKINIIRKVLSVESDSSASYKDKDI-------CTVFELA 157
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
GRDR GLL+ V +L C V+ A VWT + R+A V+ T G P+ DP L ++++
Sbjct: 158 GRDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPVKLDRLEQ 215
Query: 192 LLLYVLKGDRD 202
+LY + G D
Sbjct: 216 -ILYDMLGSGD 225
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAE 318
Y +V ++C DR KL FD VCTL DM Y +YHAT+ +E A Q +Y+R G I E
Sbjct: 620 YWLVTIQCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPRYGECIWDERR 679
Query: 319 RQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
++ LE+A++RR G + + DR+ L+ ++ G +TR
Sbjct: 680 AAKLRYMLESAVQRRFPRGTKVCVQSSDRSALV-NLFSALSSAGFWITR 727
>gi|1532164|gb|AAB07874.1| similar to uridylyl transferase, Swiss-Prot Accession Number
P43919; localized according to blastn similarity to EST
sequences; therefore, the coding span corresponds only
to an area of similarity since the initation codon and
stop codon could not be precisely determined, partial
[Arabidopsis thaliana]
Length = 211
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 84/156 (53%), Gaps = 30/156 (19%)
Query: 79 VFHVTDQNGNKLSEDDVSERIQ-----------------------------QSLGPRARS 109
VF V DQ+GNK+ + V + IQ Q + A
Sbjct: 1 VFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQRIESNAGW 60
Query: 110 F-RSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASV 168
F LR SVGV E+T+IEL G DRPGLLSEV AVL+DL CNV+ AE+WTHN+R A+V
Sbjct: 61 FIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAV 120
Query: 169 VYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKR 204
+++T +T I DP L+ IK LL VL+ + R
Sbjct: 121 IHVTDNSTHSAITDPIRLSTIKELLCNVLELSAEDR 156
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAE 318
YT + L DRP LL + LTD+ V +A + + A ++ + ++
Sbjct: 77 YTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPI 136
Query: 319 RQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAV 378
R I L + LEL EDR GLLSD+TR FREN L++ RAE++TR +A
Sbjct: 137 RLSTIKELLCNV---------LELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGKAK 187
Query: 379 NVFYVVDASGNPVKSETIESVRKE 402
+ FYV D +GNPV+S+ +ES+R++
Sbjct: 188 DTFYVTDVTGNPVESKIVESIRQQ 211
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS-----G 388
T E S+EL DR GLLS+V+ + + +V AE+ T ++A V +V D S
Sbjct: 74 TDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAIT 133
Query: 389 NPVKSETIESV 399
+P++ TI+ +
Sbjct: 134 DPIRLSTIKEL 144
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 21/159 (13%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P R +V + T I++ ++ G L E+ VL DL + A I + V HV
Sbjct: 64 PLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHV 123
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEV 142
TD + + D + R + + L +V +EL+ DR GLLS++
Sbjct: 124 TDNSTHSAITDPI----------RLSTIKELLCNV----------LELSAEDRVGLLSDI 163
Query: 143 FAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ ++ AE+ T + Y+T + TG P++
Sbjct: 164 TRTFRENSLTIVRAEISTREGKAKDTFYVT-DVTGNPVE 201
>gi|22795259|gb|AAN08231.1| unknown protein, 5'-partial [Oryza sativa Japonica Group]
Length = 108
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 71/109 (65%), Gaps = 6/109 (5%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
LELC D+ GLLS+VTRIFREN L+VTRAEV+TRG AVN FYV D++G V +TI+S+
Sbjct: 2 LELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSI 61
Query: 400 RKEIGLTILRVKDDAYSKSPPQESGR--FSLGNLFRSRSEKFLYNLGLI 446
R+ IG I +VK P ++ F NLFR RS LY+ G+
Sbjct: 62 RQAIGQNI-QVKGQPEPSEPQKKESPTWFLFANLFRPRS---LYSFGMF 106
>gi|12039282|gb|AAG46072.1|AC079830_12 hypothetical protein [Oryza sativa Japonica Group]
Length = 222
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 9/126 (7%)
Query: 182 DPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDST---HKERRLHQMMYADRDYDMNYAES 238
D + +A+I+ L ++L GD + +V + H ERRLHQ+M DRD +
Sbjct: 97 DTERMARIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQEER---- 152
Query: 239 GSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
A+ +P V+V+SC ++GY+VV ++C RPKLL D VCTLTDM YVV+H+T+ +
Sbjct: 153 --ATTSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQ 210
Query: 299 AYQEYY 304
A+QE +
Sbjct: 211 AHQESH 216
>gi|108710368|gb|ABF98163.1| ACT domain-containing protein, putative [Oryza sativa Japonica
Group]
Length = 122
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDST---HKERRLHQMMYADRDYDMNYAESGSAS 242
+A+I+ L ++L GD + +V + H ERRLHQ+M DRD + A+
Sbjct: 1 MARIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRD------QEERAT 54
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
+P V+V+SC ++GY+VV ++C RPKLL D VCTLTDM YVV+H+T+ +A+QE
Sbjct: 55 TSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQE 114
Query: 303 YY 304
+
Sbjct: 115 SH 116
>gi|297600649|ref|NP_001049552.2| Os03g0247900 [Oryza sativa Japonica Group]
gi|255674366|dbj|BAF11466.2| Os03g0247900 [Oryza sativa Japonica Group]
Length = 177
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 77/124 (62%), Gaps = 13/124 (10%)
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+G+ LEL DR GLL+ VTR+FRENGLSVT AE+TTR A+NVF+V D +G P +T
Sbjct: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
Query: 396 IESVRKEIGLTILRVKDDAYSK---------SPPQESGRFSLGNLFRSRSEKFLYNLGLI 446
I+ V + IG LRV ++ + + G FSLG+L + K L++LGLI
Sbjct: 118 IDEVIQRIGTESLRVDEERWPRLCSAEGDAAGRGGGGGLFSLGSLVK----KNLFSLGLI 173
Query: 447 KSCS 450
+SCS
Sbjct: 174 RSCS 177
>gi|148279892|gb|ABQ53997.1| unknown protein [Cicer arietinum]
Length = 106
Score = 96.3 bits (238), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/108 (48%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Query: 345 EDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIG 404
EDR GLLSD+TRIFREN L + RAE++T +A + FYV D +G+PV + I+S+R++IG
Sbjct: 2 EDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGSPVDPKIIDSIRRQIG 61
Query: 405 LTILRVK-DDAYSKSPPQESG-RFSLGNLFRSRSEKFLYNLGLIKSCS 450
T+L+VK + + S PPQ + F LG+ F++RS N LI+S S
Sbjct: 62 DTVLQVKHNSSLSPKPPQGTKIGFLLGSFFKARS---FQNFKLIRSYS 106
>gi|218193487|gb|EEC75914.1| hypothetical protein OsI_12989 [Oryza sativa Indica Group]
Length = 119
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 9/122 (7%)
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDST---HKERRLHQMMYADRDYDMNYAESGSAS 242
+A+I+ L ++L+GD S + +V +T H ERRLHQ+M DRD + A+
Sbjct: 1 MARIEAHLGHLLRGDSSSVSGSAVATVPATSVAHAERRLHQLMSPDRD------QEERAT 54
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
+P V+V+SC ++GY+VV ++C RPKLL D VCTLTDM YVV+H+T+ +A+QE
Sbjct: 55 TSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQE 114
Query: 303 YY 304
+
Sbjct: 115 SH 116
>gi|297846572|ref|XP_002891167.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
gi|297337009|gb|EFH67426.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
Length = 113
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 142 VFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDR 201
+FAVLSDL C+V+ A++WTHN R+A V+Y+ ++G PI D ++KI+ L VL D
Sbjct: 1 MFAVLSDLNCDVVDAKLWTHNGRVAYVIYLRDGSSGAPILDSQRISKIEGWLKNVLNVDN 60
Query: 202 DKRS-ANTAVSVDS-THKERRLHQMMYADRDYD 232
D S A T VS+DS H E RLHQ+M+ RDY+
Sbjct: 61 DVNSAAKTCVSMDSMMHIEHRLHQLMFEVRDYE 93
>gi|222625543|gb|EEE59675.1| hypothetical protein OsJ_12082 [Oryza sativa Japonica Group]
Length = 117
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDST---HKERRLHQMMYADRDYDMNYAESGSAS 242
+A+I+ L ++L GD + +V + H ERRLHQ+M DRD + E + S
Sbjct: 1 MARIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQE----ERATTS 56
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYV 286
R P V+V+SC ++GY+VV ++C RPKLL D VCTLTDM YV
Sbjct: 57 PR--PAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYV 98
>gi|46390848|dbj|BAD16352.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 14/116 (12%)
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH-TTIELTGRD 134
FMDVFHVTD+ G KL+ D V I+QSLG R + ALE T +ELTG
Sbjct: 26 FMDVFHVTDRLGCKLTNDSVITYIEQSLGMWNGPTRPM--------ALEGLTALELTGAG 77
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
R GL+SEVFAVL+D+ C V+ W H + ++++ ++ T D + +A+I+
Sbjct: 78 RTGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNKET-----DTERMARIE 128
>gi|357437023|ref|XP_003588787.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
gi|355477835|gb|AES59038.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
Length = 168
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Query: 272 LLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIK 331
+L D + LTDM + I +S + EY+IRH++G +++ +E++++I +EAAI+
Sbjct: 54 VLLDMLHVLTDMNFQ------IIKSYISSDEYFIRHINGYALNTTSEKEQLIKFIEAAIE 107
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGS 375
RR E + LEL ++ G LSD++R+ REN L + RA + S
Sbjct: 108 RRVCESVKLELSADNSVGFLSDISRVLRENSLVIVRAFINLFSS 151
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 18/133 (13%)
Query: 15 EKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGS-LLELVQVLNDLDLIIRRAYISSDG 73
E++ + +V +DN S T++KVDS NK G LL+++ VL D++ I ++YISSD
Sbjct: 19 ERIYMVHRNCQVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISSD- 77
Query: 74 EWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGR 133
E+F+ H+ NG L+ E++ + + ++ R V E +EL+
Sbjct: 78 EYFIR--HI---NGYALNTTSEKEQLIKFIEA------AIERRV-----CESVKLELSAD 121
Query: 134 DRPGLLSEVFAVL 146
+ G LS++ VL
Sbjct: 122 NSVGFLSDISRVL 134
>gi|28201273|dbj|BAC56782.1| unknown protein [Oryza sativa Japonica Group]
Length = 328
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 23/124 (18%)
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSLGPRAR---SFRSLRRS----VGVQAALEH--- 125
FMDVFHVTD+ G KL+ D V I+Q G S S+RRS + A+L+
Sbjct: 199 FMDVFHVTDRLGCKLTNDSVITYIEQVGGFSWWFLDSGTSVRRSWDFLMAYMASLQSLGM 258
Query: 126 -------------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +ELTG DR GL+SEVF VL+D+ C V+ WTH + ++++
Sbjct: 259 WNGPTRPMALEGLTALELTGADRTGLISEVFVVLADMDCGVVEGRTWTHRVHLGCLIFLR 318
Query: 173 SEAT 176
E T
Sbjct: 319 DEET 322
>gi|413941730|gb|AFW74379.1| hypothetical protein ZEAMMB73_033208, partial [Zea mays]
Length = 76
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 77 MDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRP 136
MDVFHVTD+ G KL++ V IQQSLG + T +ELTG R
Sbjct: 1 MDVFHVTDRLGRKLTDASVIAYIQQSLG-------TWVEPAAAAPPEGLTALELTGPGRA 53
Query: 137 GLLSEVFAVLSDLKCNVMGAEVW 159
GLLSEVFAVL+D++C V A W
Sbjct: 54 GLLSEVFAVLADMQCGVADARAW 76
>gi|145355694|ref|XP_001422087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582327|gb|ABP00404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V +DN S+ AT+++V N G LL+ V L +L L I + + G+ F+V
Sbjct: 12 PIVIIDNKSDAFATVVEVSFGNYLGELLDTVAALKNLGLDINKGDVQMSGDSTKTSKFYV 71
Query: 83 TD-QNGNKLSEDDVSERIQQSLGPRARSFR----------------------SLRRSV-- 117
D +NG K+++ + E I+Q++ +F +++ V
Sbjct: 72 IDRENGEKVTKSERLEEIRQTILTNMMAFHPEAAEYIQAKAPTRAGGEGVLGKVKKKVQT 131
Query: 118 GVQAALE--HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
G++ A E H+ +E+ DRPGLL +V L DL V+ AEV T + + ++Y+T +
Sbjct: 132 GIKCAPERYHSKLEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKASDIIYVTHK- 190
Query: 176 TGLPIDDP 183
G P+ P
Sbjct: 191 -GGPLSPP 197
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 41/192 (21%)
Query: 238 SGSASGRSKP--LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV--I 293
G++ G KP +V +++ +D TVV + + L D V L ++ + V
Sbjct: 1 GGASVGTEKPVPIVIIDNKSDAFATVVEVSFGNYLGELLDTVAALKNLGLDINKGDVQMS 60
Query: 294 AESPEAYQEYYIRHVDGNPISS----EAERQRVINCL-----EAA--------------- 329
+S + + Y I +G ++ E RQ ++ + EAA
Sbjct: 61 GDSTKTSKFYVIDRENGEKVTKSERLEEIRQTILTNMMAFHPEAAEYIQAKAPTRAGGEG 120
Query: 330 ----IKRRTSEGIS---------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQ 376
+K++ GI LE+ DR GLL DV R ++ L V AEV T G +
Sbjct: 121 VLGKVKKKVQTGIKCAPERYHSKLEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDK 180
Query: 377 AVNVFYVVDASG 388
A ++ YV G
Sbjct: 181 ASDIIYVTHKGG 192
>gi|194695564|gb|ACF81866.1| unknown [Zea mays]
gi|413917413|gb|AFW57345.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917414|gb|AFW57346.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917415|gb|AFW57347.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 158
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 17/87 (19%)
Query: 6 SSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIR 65
SS+ DE++K + MNPPRVT+DNTS A +I VL +L LI+
Sbjct: 19 SSWDSDDEYQKFIQNMNPPRVTIDNTSCPSAIVI---------------HVLTNLKLIVT 63
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSE 92
+AYISSDG WFMDV TD+ K E
Sbjct: 64 KAYISSDGGWFMDV--STDEGEAKAQE 88
>gi|297599874|ref|NP_001048007.2| Os02g0729500 [Oryza sativa Japonica Group]
gi|255671227|dbj|BAF09921.2| Os02g0729500 [Oryza sativa Japonica Group]
Length = 159
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDR 135
FMDVFHVTD+ G KL+ D V I+QSLG + R + ++ T +ELTG R
Sbjct: 87 FMDVFHVTDRLGCKLTNDSVITYIEQSLG----MWNGPTRPMALEGL---TALELTGAGR 139
Query: 136 PGLLSEVFAVLSDLKC 151
GL+SEVFAVL+D+ C
Sbjct: 140 TGLISEVFAVLADMDC 155
>gi|90420550|ref|ZP_01228457.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335278|gb|EAS49031.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 943
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV+VDNT + + T+I+V+ ++ G L ++ ++DL+L IR A+IS+ GE +DVF+VT
Sbjct: 836 PRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVT 895
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++ + ERI+ L
Sbjct: 896 DLIGTKITSETRIERIEVRL 915
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 105 PRARSFRSLRRSVGVQAALEH--TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
PR+ +++ V V L + T IE+ G DRPGLLS+V +SDL ++ A + T+
Sbjct: 826 PRSTELFAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYG 885
Query: 163 SRMASVVYIT 172
++ V Y+T
Sbjct: 886 EKVVDVFYVT 895
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
DR GLLSDVT + L + A ++T G + V+VFYV D G + SET
Sbjct: 857 DRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVTDLIGTKITSET 906
>gi|308813530|ref|XP_003084071.1| unnamed protein product [Ostreococcus tauri]
gi|116055954|emb|CAL58487.1| unnamed protein product [Ostreococcus tauri]
Length = 481
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 28/183 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+V +DN S+ AT+++V G L++ + L +L L I R ++ G+ F+V
Sbjct: 275 PKVIIDNKSDAFATVLEVTFGTYLGELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVL 334
Query: 84 DQN-GNKLSEDDVSERIQQSL-----------------------GPRARSFRSLRRSV-- 117
D++ G K+++ + E I+Q++ G +R +V
Sbjct: 335 DRDTGEKVTKSERLEEIRQTVLTNMLAFHPESAEFIQAKAPTRAGANDSPLGKVRSTVET 394
Query: 118 GVQAALE--HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
G++ E HT +++ DRPGLL +V L DL V+ AEV T ++ ++YIT
Sbjct: 395 GIKCTAEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYITHRG 454
Query: 176 TGL 178
L
Sbjct: 455 GPL 457
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
L++ DR GLL DV R ++ L V AEV T G++A ++ Y+ G
Sbjct: 407 LDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYITHRGG 455
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 250 TVES---CT-DKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
TVE+ CT +K +T +++ DRP LL D V TL D+ V A V +A YI
Sbjct: 391 TVETGIKCTAEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYI 450
Query: 306 RHVDGNPISSEAERQRVINCL 326
H G P+S E Q V+N L
Sbjct: 451 TH-RGGPLSPAME-QLVVNSL 469
>gi|388495334|gb|AFK35733.1| unknown [Lotus japonicus]
Length = 282
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 26/164 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+ +AT++++ ++ G+L++ ++ L DL L + + +S++G F +T
Sbjct: 76 PMVLIDQDSDSEATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFIT 135
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
N G K+ + D+ ERI+ ++ P + ++ G++A ++ ++ R
Sbjct: 136 QSNTGRKVEDPDMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKLDLDFATRIQ 195
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWTH 161
DRPGLL E+ V++D+ +V AE+ T
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTE 239
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 25/205 (12%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
E T ++L+ DR G L + L DL +V V T S + +IT TG ++DP
Sbjct: 87 EATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFITQSNTGRKVEDP 146
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAE--SGSA 241
D L +I+ ++ L + S A+ + + + D+++A
Sbjct: 147 DMLERIRLTIISNLLKYHPESSEQLAMG--------EVFGIKAPVKKLDLDFATRIQVKE 198
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
G + L+ +E+ DRP LL + + + D+ V A + E A
Sbjct: 199 DGPKRSLLYIETA-------------DRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKD 245
Query: 302 EYYIRHVDGNPISSEAERQRVINCL 326
++++ + G + + Q ++NCL
Sbjct: 246 KFHVSY--GGAALNSSMSQVLVNCL 268
>gi|332288112|ref|YP_004418964.1| PII uridylyltransferase [Gallibacterium anatis UMN179]
gi|330431008|gb|AEC16067.1| PII uridylyltransferase [Gallibacterium anatis UMN179]
Length = 877
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 33/190 (17%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYIR 306
+V V S +G T + + C D+P+L V TL ++ A +I AES E + + +
Sbjct: 688 VVLVSSRFSRGATEIFIYCADQPQLFNKVVRTLDAKNLSIHDAQIITAESGEVFDSFIVT 747
Query: 307 HVDGNPISSEAERQRVINCLEAAIK----------RRTS-------------------EG 337
DG+ + ++ R + L+A +K RR+S E
Sbjct: 748 ENDGSALR-KSRRDEIAQVLKAVLKGEKRVPTATARRSSKLQHFNVPLEVCFLNIEKTEQ 806
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-- 395
LEL +DRAGLL+ ++ IF + L+++ A++TT G +A + F + + G + E
Sbjct: 807 TELELITKDRAGLLAIISDIFTQQRLTLSNAKITTNGEKAEDFFILTNEKGTALSVEERR 866
Query: 396 IESVRKEIGL 405
+ ++ E GL
Sbjct: 867 LLQLKLEAGL 876
>gi|357476529|ref|XP_003608550.1| Uridylyl transferases-like protein [Medicago truncatula]
gi|355509605|gb|AES90747.1| Uridylyl transferases-like protein [Medicago truncatula]
Length = 109
Score = 62.4 bits (150), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 349 GLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL 408
GLLS VT++ ENGLS+TR E G A+ YV SG V +E +++EIG +I+
Sbjct: 2 GLLSKVTQVIHENGLSITRIEFGVEGEAAIGSLYVTGCSGQDVNENIVELIKREIGGSIV 61
Query: 409 RVKDDAYSKSPPQESGR--------FSLGNLFRSRSEKFLYNLGLIKS 448
+ Y S S FS G + RS E+ + N I+S
Sbjct: 62 LAQSSPYRDSQSSSSSNNSRDVIPTFSFGGMIRSHLERLINNFRPIRS 109
>gi|384083336|ref|ZP_09994511.1| PII uridylyl-transferase [gamma proteobacterium HIMB30]
Length = 887
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 31/173 (17%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV-IAESPEAYQEYYIR 306
L ++ TD G T V + P+R L D +D+ V A + +++ + + I+
Sbjct: 684 LAANQTLTDIGSTQVLVSTPNRVHLFADLTACFSDLGLSVLDAKLHTSDAGRSIDIFIIQ 743
Query: 307 H-VDGNPISSEAERQRVINCLEAAI---------KRRTS------------------EG- 337
H P+++ +++R++ LE A RRT EG
Sbjct: 744 HDATCQPVTASDDQERLLRGLEQAALGQYVENAGTRRTPRAHKYFNLPANVSIRPDLEGK 803
Query: 338 -ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
+EL DRAGLL+ V R+F E GL ++ A++ T G + +VFYV D+ GN
Sbjct: 804 RTLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSRGN 856
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDVFHVT-DQNGNKLSED 93
+T + V + N+ +L +DL L + A + +SD +D+F + D ++
Sbjct: 695 STQVLVSTPNRVHLFADLTACFSDLGLSVLDAKLHTSDAGRSIDIFIIQHDATCQPVTAS 754
Query: 94 DVSERI-----QQSLG-----------PRARSFRSLRRSVGVQAALE--HTTIELTGRDR 135
D ER+ Q +LG PRA + +L +V ++ LE T IEL DR
Sbjct: 755 DDQERLLRGLEQAALGQYVENAGTRRTPRAHKYFNLPANVSIRPDLEGKRTLIELVAPDR 814
Query: 136 PGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLY 195
GLL+ V V ++ ++ A++ T R+ V Y+T ++ G + D D + ++K L +
Sbjct: 815 AGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVT-DSRGNNLYDDDFIHRLKERLEH 873
Query: 196 VLKG 199
L
Sbjct: 874 ELNA 877
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P V++ K TLI++ + ++ G L + +V + L + A I++ GE DVF+V
Sbjct: 791 PANVSIRPDLEGKRTLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYV 850
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD GN L +DD R+++ L
Sbjct: 851 TDSRGNNLYDDDFIHRLKERL 871
>gi|381167755|ref|ZP_09876961.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
gi|380683128|emb|CCG41773.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
Length = 924
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S++ ++ N++ A++ T + MA + ++ G P D P AK+ RL
Sbjct: 736 DHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQDSEGAPFDSP---AKLNRL- 791
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
ANT V S RL Q + A R ++ S + + P V V++
Sbjct: 792 ------------ANTIEQVLS--GRLRLAQEL-ASRKGNL---PSRAHVFKVPPRVLVDN 833
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ +TV+ + DRP LL+D +T + + A + +Y++ V G+ +
Sbjct: 834 KPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDVFGHKV 893
Query: 314 SSEAERQRVINCLEAAIKRRTS 335
E + +R+ L AA+K + S
Sbjct: 894 EHERKLERIRVTLLAALKEQNS 915
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDN +R T+I+++ ++ G L ++ + L L I A+IS+ GE +DVF+V
Sbjct: 826 PPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G+K+ + ERI+ +L
Sbjct: 886 KDVFGHKVEHERKLERIRVTL 906
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT IE+ GRDRPGLL ++ + ++ L + A + T+ R+ V Y+ + G ++
Sbjct: 839 HTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYV-KDVFGHKVEHER 897
Query: 185 TLAKIKRLLLYVLK 198
L +I+ LL LK
Sbjct: 898 KLERIRVTLLAALK 911
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE-TIES 398
+E+ DR GLL D+T + GL ++ A ++T G + V+VFYV D G+ V+ E +E
Sbjct: 842 IEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDVFGHKVEHERKLER 901
Query: 399 VR 400
+R
Sbjct: 902 IR 903
>gi|432659433|ref|ZP_19895098.1| [protein-PII] uridylyltransferase [Escherichia coli KTE111]
gi|431204255|gb|ELF02828.1| [protein-PII] uridylyltransferase [Escherichia coli KTE111]
Length = 890
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE +K+
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLKQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|356575488|ref|XP_003555872.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 282
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 26/165 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+ +AT++++ N+ G+LL+ ++ L DL L + + +S++G F +T
Sbjct: 76 PIVLIDQESDSEATIVQLSFGNRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 135
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
+ G K+ + D+ ERI+ ++ P + ++ G++A + ++ R
Sbjct: 136 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 195
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
DRPGLL E+ V++D+ +V AE+ T
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEG 240
>gi|114707346|ref|ZP_01440243.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
gi|114537227|gb|EAU40354.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
Length = 964
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P++TVDN+ + + T+I+V+ ++ G L ++ ++DL L IR A+IS+ GE +D F+VT
Sbjct: 857 PKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVT 916
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++ + RI++ L
Sbjct: 917 DLIGAKVTSEAKIARIERRL 936
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 85 QNGNKL--SEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH--TTIELTGRDRPGLLS 140
+N KL E +S I QS G R ++ + V +L + T IE+ G DR GLL+
Sbjct: 825 ENIEKLLRGETIMSRLIGQSRGTRRADLFEVKPKITVDNSLSNRVTVIEVEGLDRTGLLA 884
Query: 141 EVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
++ +SDL ++ A + T+ ++ Y+T + G + +A+I+R L VL+
Sbjct: 885 DITGAISDLSLDIRSAHISTYGEKIIDAFYVT-DLIGAKVTSEAKIARIERRLQSVLE 941
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
DR GLL+D+T + L + A ++T G + ++ FYV D G V SE
Sbjct: 878 DRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVTDLIGAKVTSEA 927
>gi|242084772|ref|XP_002442811.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
gi|241943504|gb|EES16649.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
Length = 273
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 79/162 (48%), Gaps = 26/162 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+R AT++++ ++ G+LL+ ++ L DL L + + +++D FH+
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 128
Query: 84 DQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR--- 133
++G K+ + D+ ERI+ ++ P + ++ G++ + +++ R
Sbjct: 129 -RSGRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKAVVDIATRIVI 187
Query: 134 ---------------DRPGLLSEVFAVLSDLKCNVMGAEVWT 160
DRPGLL E+ +++D +V AE+ T
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNVDVESAEIDT 229
>gi|222084682|ref|YP_002543211.1| PII uridylyl-transferase [Agrobacterium radiobacter K84]
gi|398379620|ref|ZP_10537740.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
gi|221722130|gb|ACM25286.1| protein-P-II uridylyltransferase [Agrobacterium radiobacter K84]
gi|397722252|gb|EJK82796.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
Length = 971
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP VT+ N+ + K T+I+V+ ++ G L E+ VL+DL L I A I++ GE +D F+V
Sbjct: 848 PPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYV 907
Query: 83 TDQNGNKLSEDDVSERIQQSLGP 105
TD G K+S ++ I L P
Sbjct: 908 TDLVGQKISNENKRANITARLKP 930
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + +E
Sbjct: 864 IEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTDLVGQKISNE 918
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 31/209 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIFTTADGRALDTIHVSREFT----DDAD 806
Query: 185 TLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L + I R++ VL G KR + + K RR ++
Sbjct: 807 ELRRAGTIGRMIEDVLAGR--KRLPEV---IATRTKNRRKNKAFVI-------------- 847
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
P VT+ + +TV+ + C DR LL + L+D+ ++ A + +
Sbjct: 848 ----PPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAI 330
+Y+ + G IS+E +R + L+ +
Sbjct: 904 SFYVTDLVGQKISNENKRANITARLKPVM 932
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ DR GLLSE+ +VLSDL ++ A + T ++ Y+T + G I + +
Sbjct: 862 TVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVT-DLVGQKISNENK 920
Query: 186 LAKIKRLLLYVLKGDRDK 203
A I L V+ G+ D+
Sbjct: 921 RANITARLKPVMAGEEDE 938
>gi|340778936|ref|ZP_08698879.1| PII uridylyl-transferase [Acetobacter aceti NBRC 14818]
Length = 988
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + +D PGL +++ ++ +++ A + T ++ MA +ATG D+P
Sbjct: 782 TEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQDATGEAFDEPHR 841
Query: 186 LAKIKRLLLYVLKGDRDKRS--ANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
L K+ + L G D + A T S + R +H
Sbjct: 842 LTKLFSITERALSGRLDIATEIAKTNASGQLLSRTRAIH--------------------- 880
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
P V +++ +TV+ + DRP LL D L +M+ +Y A + A +
Sbjct: 881 -VPPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVF 939
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKR 332
Y++ + G ++ E +++ + L A +K+
Sbjct: 940 YVKDLSGMKVTDENRLKKIRDRLMAGLKK 968
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
+A+ HT IE+ GRDRPGLL +V + L++++ + A + T+ R V Y+ + +G+
Sbjct: 890 RASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYV-KDLSGMK 948
Query: 180 IDDPDTLAKIKRLLLYVLK 198
+ D + L KI+ L+ LK
Sbjct: 949 VTDENRLKKIRDRLMAGLK 967
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 53/81 (65%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+++ ++ G L ++ LN++ L I A+I++ G +DVF+V
Sbjct: 882 PPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYV 941
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D +G K+++++ ++I+ L
Sbjct: 942 KDLSGMKVTDENRLKKIRDRL 962
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL DV E L + A +TT G +AV+VFYV D SG V E
Sbjct: 898 IEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVKDLSGMKVTDE 952
>gi|421775131|ref|ZP_16211741.1| protein-P-II uridylyltransferase [Escherichia coli AD30]
gi|408459563|gb|EKJ83344.1| protein-P-II uridylyltransferase [Escherichia coli AD30]
Length = 890
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V RIF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGRIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|414341139|ref|YP_006982660.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|411026474|gb|AFV99728.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|453330895|dbj|GAC87222.1| PII uridylyl-transferase [Gluconobacter thailandicus NBRC 3255]
Length = 948
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 228 DRDYDMNYAESGSASGRSKPLVTVES--CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQY 285
D D M +A S R + VTVE+ D+G T + + C D P L L
Sbjct: 717 DTDTHMRHARMIHDSDRYRSPVTVEAYPIPDRGVTELTVLCADHPGLFSQIAGALAVAGA 776
Query: 286 VVYHATVIAESPE-AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRT--SEGIS--- 339
+ A + S A ++++ DG + R+ + +E A+ R +GIS
Sbjct: 777 SIVDARIHTLSDGMALDTFWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGISEAR 836
Query: 340 -----------------------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
+E+ DR+GLL D+TR + L ++ A +
Sbjct: 837 HRGASRRMRAIHVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHI 896
Query: 371 TTRGSQAVNVFYVVDASGNPVK-SETIESVRKEI--GLTILRVKDDAYSKSP 419
TT G +AV+VFYV D G + + + +R + LT L VK A +P
Sbjct: 897 TTYGMRAVDVFYVRDLLGMKITDAARLAHIRASLLDTLTPLPVKKTATVPTP 948
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ + T+I+++ ++ G L ++ + L+ L I A+I++ G +DVF+V
Sbjct: 850 PPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYV 909
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+++ I+ SL
Sbjct: 910 RDLLGMKITDAARLAHIRASL 930
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 85/211 (40%), Gaps = 27/211 (12%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLN--DLDLIIRRAYISSDGEWFMDV 79
+P V +R T + V A+ G ++ L ++ R + SDG +D
Sbjct: 736 SPVTVEAYPIPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGM-ALDT 794
Query: 80 FHVTDQNG------------NKLSEDDVSERIQQSLG---PRARSFRSLRRSVGV----- 119
F V D +G N L E +S R+ G R R R++ V
Sbjct: 795 FWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGISEARHRGASRRMRAIHVPPRVV 854
Query: 120 ---QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEAT 176
A+ HT IE+ GRDR GLL ++ LS + A + T+ R V Y+ +
Sbjct: 855 IDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYV-RDLL 913
Query: 177 GLPIDDPDTLAKIKRLLLYVLKGDRDKRSAN 207
G+ I D LA I+ LL L K++A
Sbjct: 914 GMKITDAARLAHIRASLLDTLTPLPVKKTAT 944
>gi|307104916|gb|EFN53167.1| hypothetical protein CHLNCDRAFT_136962 [Chlorella variabilis]
Length = 262
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 45/218 (20%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +DN S+ AT++ V+ ++ G LL+ + L L L IRRA + SD E F+VT
Sbjct: 46 PVVKIDNESDPFATIVSVEYGDRLGELLDTIASLKALGLNIRRAKLKSDRE---HKFYVT 102
Query: 84 D-----------------------------QNGNKLSEDDVSER---IQQSLGPRARSFR 111
D ++G +L+ + R + + + P A
Sbjct: 103 DMRTSEKVVRSAKLEEIRLTILQNLLQFHPESGEQLAWGTPAARQAVVTRDIDPTAP--L 160
Query: 112 SLRRSVGVQAALE------HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRM 165
+R + Q + H+ + + DRPGLL+++ VL D+ NV+ AEV T
Sbjct: 161 GAKRGISTQIEVREHPTGTHSVLLVNTLDRPGLLTDIVRVLKDVNLNVVSAEVDTIGRNA 220
Query: 166 ASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDK 203
IT G P+ DP + L Y+ +G+ +K
Sbjct: 221 MDRFNITYH--GEPLSDPMCQLTVNALQYYLSQGEVEK 256
>gi|372268622|ref|ZP_09504670.1| PII uridylyl-transferase [Alteromonas sp. S89]
Length = 911
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 41/199 (20%)
Query: 258 GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEYYIRHVDGNPISS 315
G T V + PDRP + F AV T DM + H + S Y +Y+ G P+
Sbjct: 718 GATEVFVYTPDRPNV-FAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLD 776
Query: 316 EAER-QRVINCLE----------AAIKRRTSEGI--------------------SLELCC 344
E R +++ N L+ IKRRT + +LE+
Sbjct: 777 EPHRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITS 836
Query: 345 EDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IESVRKEI 403
DR GLL+ + RIF + L + A+++T G + ++F++ D+ P+ IE++++ I
Sbjct: 837 ADRPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAI 896
Query: 404 GLTILRVKDDAYSKS-PPQ 421
+ DA+ + PPQ
Sbjct: 897 CQEL-----DAHQATLPPQ 910
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 10 VVDEFEKLVLRMNPPRVTVDNTSNRKA---------TLIKVDSANKRGSLLELVQVLNDL 60
+V+++ K++ R P R+ + + ++ + +++ SA++ G L + ++
Sbjct: 794 LVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSADRPGLLARIARIFISH 853
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
DL + A IS+ GE D+FH+TD L+++ + E +QQ++
Sbjct: 854 DLRLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAI 896
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNG------- 87
AT + V + ++ +V L+ L+L I A + SS + +D F+V D++G
Sbjct: 719 ATEVFVYTPDRPNVFAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEP 778
Query: 88 -------NKLSED-----DVSERIQQSLGPRARSFRSLRRS-VGVQAALEHTTIELTGRD 134
N L E+ D S+ I++ R + F ++ + + ++T+E+T D
Sbjct: 779 HRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSAD 838
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
RPGLL+ + + + A++ T R+ + +IT
Sbjct: 839 RPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHIT 876
>gi|359486976|ref|XP_002268975.2| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
Length = 280
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 32/182 (17%)
Query: 11 VDEFEKLVLRMNP-------PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
+D + L +P P V +D S+ AT++++ ++ G+L++ ++ L LDL
Sbjct: 55 IDSVPSISLSFDPDSDYVPTPMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLD 114
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRS 116
+++ ++++G F +T +G K+ + D+ ERI+ ++ P + ++ +
Sbjct: 115 VQKGTVTTEGSVTQTKFFITRIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEA 174
Query: 117 VGVQAALEHTTIELTGR------------------DRPGLLSEVFAVLSDLKCNVMGAEV 158
G++A + +++ DRPGLL E+ +++D+ +V AE+
Sbjct: 175 FGIKAPEKKLDVDVATHIHVKDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEI 234
Query: 159 WT 160
T
Sbjct: 235 DT 236
>gi|296080993|emb|CBI18591.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 32/182 (17%)
Query: 11 VDEFEKLVLRMNP-------PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLI 63
+D + L +P P V +D S+ AT++++ ++ G+L++ ++ L LDL
Sbjct: 76 IDSVPSISLSFDPDSDYVPTPMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLD 135
Query: 64 IRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRS 116
+++ ++++G F +T +G K+ + D+ ERI+ ++ P + ++ +
Sbjct: 136 VQKGTVTTEGSVTQTKFFITRIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEA 195
Query: 117 VGVQAALEHTTIELTGR------------------DRPGLLSEVFAVLSDLKCNVMGAEV 158
G++A + +++ DRPGLL E+ +++D+ +V AE+
Sbjct: 196 FGIKAPEKKLDVDVATHIHVKDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEI 255
Query: 159 WT 160
T
Sbjct: 256 DT 257
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 26/213 (12%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T ++L+ DR G L + L L +V V T S + +IT G ++DPD
Sbjct: 109 TIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT-RIDGRKVEDPDM 167
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
L +I+ ++ L + S A+ + E++L D D+ G
Sbjct: 168 LERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKL--------DVDVATHIHVKDDG 219
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ L+ +E+ DRP LL + V +TD+ V A + E A ++
Sbjct: 220 PKRSLLYIETA-------------DRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKF 266
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
++ + G +SS Q +IN L ++R +E
Sbjct: 267 HVSY-RGAALSSSLS-QVMINSLRYYLRRPETE 297
>gi|52425360|ref|YP_088497.1| PII uridylyl-transferase [Mannheimia succiniciproducens MBEL55E]
gi|81170622|sp|Q65SZ8.1|GLND_MANSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52307412|gb|AAU37912.1| GlnD protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEA 299
A ++ LV + + G T V + C DRP L V + + + ++ A +I A
Sbjct: 680 AGVETELLVKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYA 739
Query: 300 YQEYYIRHVDGNPISSEAER---QRVINCLEA--AIKRRTSEGISL-------------- 340
+ + + +DG+ + + R + +IN L + K + SE L
Sbjct: 740 FDSFIVTELDGSLLKFDRRRVLEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNT 799
Query: 341 --------ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
EL D+AGLL+DV+ +F E LS+ A++TT G +A + F + +A G +
Sbjct: 800 EKTTHTEMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEALS 859
Query: 393 SETIESVRKEI 403
+S+ +++
Sbjct: 860 ERERQSLSEKL 870
>gi|397656053|ref|YP_006496755.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca E718]
gi|394344683|gb|AFN30804.1| [Protein-PII] uridylyltransferase [Klebsiella oxytoca E718]
Length = 887
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 SKPMILLSSHASRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R +I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEMIRVGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + ++R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LSKPMILLSSHASRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +S+R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEMIRVGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|375259081|ref|YP_005018251.1| PII uridylyl-transferase [Klebsiella oxytoca KCTC 1686]
gi|365908559|gb|AEX04012.1| PII uridylyl-transferase [Klebsiella oxytoca KCTC 1686]
Length = 887
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 SKPMILLSSHASRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R +I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEMIRVGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + ++R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LSKPMILLSSHASRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +S+R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEMIRVGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|117928771|ref|YP_873322.1| PII uridylyl-transferase [Acidothermus cellulolyticus 11B]
gi|117649234|gb|ABK53336.1| metal dependent phosphohydrolase [Acidothermus cellulolyticus 11B]
Length = 771
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 314 SSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTR 373
+ A+RQ + +++ E+ DR GLL + RI ++GL V A+V T
Sbjct: 673 AGAAQRQPAAPPPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETL 732
Query: 374 GSQAVNVFYVVDASGNPVKSETIESVRKEIGLTIL 408
G+ AV+VFYV D +G P+ E VR+ + +L
Sbjct: 733 GADAVDVFYVTDTAGKPLSEAAAEEVRRALETALL 767
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + ++ AT+ +V + ++ G L + ++L+D L +R A + + G +DVF+V
Sbjct: 683 PPPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYV 742
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G LSE +E ++++L
Sbjct: 743 TDTAGKPLSE-AAAEEVRRAL 762
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 92/242 (38%), Gaps = 39/242 (16%)
Query: 98 RIQQSLGPRARSFRSLRRSVGVQAALEHTTIELT---GR------DRPGLLSEVFAVLSD 148
R++ SL +A ++ V+AA+E + + GR D+PGLL VL+
Sbjct: 555 RVRASLAGQAPQRPTVEIPAAVRAAVERGQLAVAADGGRLIVVAPDQPGLLWRSAGVLAL 614
Query: 149 LKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANT 208
+ V A + +S +V + E L DPD +++ L L G D +A
Sbjct: 615 HRLGVRAARATSIDSTAVTVFDVEPEY--LAEIDPD---RLREDLRRALDGSLDLSAALA 669
Query: 209 AVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPD 268
S + ++ + P V + TV +R D
Sbjct: 670 RRSAGAAQRQ------------------------PAAPPPVVLLPAASADATVFEVRAHD 705
Query: 269 RPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEA 328
RP LLF L+D V A V +A +Y+ G P+ SEA + V LE
Sbjct: 706 RPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVTDTAGKPL-SEAAAEEVRRALET 764
Query: 329 AI 330
A+
Sbjct: 765 AL 766
>gi|115487380|ref|NP_001066177.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|77553037|gb|ABA95833.1| ACT domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648684|dbj|BAF29196.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|215704512|dbj|BAG94145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616648|gb|EEE52780.1| hypothetical protein OsJ_35248 [Oryza sativa Japonica Group]
Length = 279
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+R AT++++ ++ G+LL+ ++ L DL L + + +S++ FH+
Sbjct: 75 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTESAVTQTKFHIM 134
Query: 84 DQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQA--------ALEHTTI 128
++G K+ + D E+I+ ++ P + ++ G++A + H +
Sbjct: 135 -RSGRKVEDPDTLEKIRLTVINNLLQYHPESSENLAMGEFFGIKAPEKKVDVDVVTHVIV 193
Query: 129 ELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
E G DRPGLL E+ +++D+ +V AE+ T
Sbjct: 194 EDDGPKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDT 235
>gi|375152168|gb|AFA36542.1| putative amino acid binding protein, partial [Lolium perenne]
Length = 202
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 26/158 (16%)
Query: 28 VDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNG 87
+D S+R AT++++ ++ G+LL+ ++ L DL L + + +S+D FH+ + G
Sbjct: 2 IDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIM-RLG 60
Query: 88 NKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQA--------ALEHTTIELTG 132
K+ + D+ E I+ ++ P + ++ G++A H +E G
Sbjct: 61 RKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPENKIDVEVATHVIVEDDG 120
Query: 133 ----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
DRPGLL EV +++D+ C+V AE+ T
Sbjct: 121 PKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDT 158
>gi|402845075|ref|ZP_10893422.1| protein-P-II uridylyltransferase [Klebsiella sp. OBRC7]
gi|423106524|ref|ZP_17094225.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5242]
gi|376377961|gb|EHS90728.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5242]
gi|402272675|gb|EJU21893.1| protein-P-II uridylyltransferase [Klebsiella sp. OBRC7]
Length = 887
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 SKPMILLSSHASRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R +I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEMIRLGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + ++R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LSKPMILLSSHASRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +S+R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEMIRLGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|283783951|ref|YP_003363816.1| [protein-PII] uridylyltransferase [Citrobacter rodentium ICC168]
gi|282947405|emb|CBG86950.1| [protein-PII] uridylyltransferase [Citrobacter rodentium ICC168]
Length = 890
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+SS +R I LE AI +R+ +
Sbjct: 752 FIVLEPDGSPLSS--DRHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|444353052|ref|YP_007389196.1| [Protein-PII] uridylyltransferase (EC 2.7.7.59) [Enterobacter
aerogenes EA1509E]
gi|443903882|emb|CCG31656.1| [Protein-PII] uridylyltransferase (EC 2.7.7.59) [Enterobacter
aerogenes EA1509E]
Length = 867
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 670 SKPMILLSSRATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 728
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I + LE I +R+ E +
Sbjct: 729 FIVLEPDGSPLS--ADRHEAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVATEVNFLPT 786
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 787 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 846
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 847 NELQQEVQQRL 857
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 669 LSKPMILLSSRATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 727
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R + PR A R + V H
Sbjct: 728 TFIVLEPDGSPLSADRHEAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVATEVNFLPTH 787
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 788 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 839
>gi|423111378|ref|ZP_17099072.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5243]
gi|423112603|ref|ZP_17100294.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5245]
gi|376376577|gb|EHS89354.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5243]
gi|376390980|gb|EHT03662.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5245]
Length = 887
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 SKPMILLSSHASRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R +I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEMIRVGLEQTITQRSWQPPAPRRQAAKLRHFSVPTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + ++R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LSKPMILLSSHASRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEMIRVGLEQTITQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 126 T----TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|226530840|ref|NP_001151043.1| ACT domain containing protein [Zea mays]
gi|195643854|gb|ACG41395.1| ACT domain containing protein [Zea mays]
Length = 273
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 26/162 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+R AT++++ ++ G+LL+ ++ L DL L + + +++D FH+
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 128
Query: 84 DQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALE--------HTTI 128
+ G K+ + D+ ERI+ ++ P + ++ G++ ++ H +
Sbjct: 129 -RFGRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 187
Query: 129 ELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
E G DRPGLL E+ +++D +V AE+ T
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDT 229
>gi|398830549|ref|ZP_10588735.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
gi|398213986|gb|EJN00570.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
Length = 937
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L E+ V++DL L I A++++ GE +DVF+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G++++ RI++ L
Sbjct: 894 DLVGHQITNTTRQSRIRKKL 913
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPG+LSE+ V+SDL ++ A V T ++ V Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVT-DLVGHQITNTTR 905
Query: 186 LAKIKRLLLYVL-KGD 200
++I++ LL + +GD
Sbjct: 906 QSRIRKKLLALFGEGD 921
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIES- 398
+E+ DR G+LS++T + + L + A VTT G + ++VFYV D G+ + + T +S
Sbjct: 849 IEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVTDLVGHQITNTTRQSR 908
Query: 399 VRKEI 403
+RK++
Sbjct: 909 IRKKL 913
>gi|336248809|ref|YP_004592519.1| PII uridylyl-transferase [Enterobacter aerogenes KCTC 2190]
gi|334734865|gb|AEG97240.1| PII uridylyl-transferase [Enterobacter aerogenes KCTC 2190]
Length = 887
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 SKPMILLSSRATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I + LE I +R+ E +
Sbjct: 749 FIVLEPDGSPLS--ADRHEAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVATEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LSKPMILLSSRATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R + PR A R + V H
Sbjct: 748 TFIVLEPDGSPLSADRHEAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVATEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|420375810|ref|ZP_14875636.1| protein-P-II uridylyltransferase [Shigella flexneri 1235-66]
gi|391309471|gb|EIQ67140.1| protein-P-II uridylyltransferase [Shigella flexneri 1235-66]
Length = 890
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+SS +R I LE AI +R+ +
Sbjct: 752 FIVLEPDGSPLSS--DRHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|421844792|ref|ZP_16277949.1| PII uridylyl-transferase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411774271|gb|EKS57781.1| PII uridylyl-transferase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|455643764|gb|EMF22888.1| PII uridylyl-transferase [Citrobacter freundii GTC 09479]
Length = 890
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+SS +R I LE AI +R+ +
Sbjct: 752 FIVLEPDGSPLSS--DRHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSED-----------DVSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++R Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSSDRHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIAT 862
>gi|237729473|ref|ZP_04559954.1| PII uridylyl-transferase [Citrobacter sp. 30_2]
gi|365103865|ref|ZP_09333526.1| [protein-PII] uridylyltransferase [Citrobacter freundii 4_7_47CFAA]
gi|226909202|gb|EEH95120.1| PII uridylyl-transferase [Citrobacter sp. 30_2]
gi|363644478|gb|EHL83759.1| [protein-PII] uridylyltransferase [Citrobacter freundii 4_7_47CFAA]
Length = 890
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+SS +R I LE AI +R+ +
Sbjct: 752 FIVLEPDGSPLSS--DRHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSED-----------DVSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++R Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSSDRHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIAT 862
>gi|419937859|ref|ZP_14454705.1| PII uridylyl-transferase [Escherichia coli 75]
gi|388411398|gb|EIL71579.1| PII uridylyl-transferase [Escherichia coli 75]
Length = 890
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|301028658|ref|ZP_07191881.1| protein-P-II uridylyltransferase [Escherichia coli MS 196-1]
gi|423700948|ref|ZP_17675407.1| [protein-PII] uridylyltransferase [Escherichia coli H730]
gi|433046216|ref|ZP_20233660.1| [protein-PII] uridylyltransferase [Escherichia coli KTE120]
gi|299878327|gb|EFI86538.1| protein-P-II uridylyltransferase [Escherichia coli MS 196-1]
gi|385713648|gb|EIG50579.1| [protein-PII] uridylyltransferase [Escherichia coli H730]
gi|431574060|gb|ELI46845.1| [protein-PII] uridylyltransferase [Escherichia coli KTE120]
Length = 890
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|194701562|gb|ACF84865.1| unknown [Zea mays]
gi|413916121|gb|AFW56053.1| ACT domain containing protein [Zea mays]
Length = 271
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 26/162 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+R AT++++ ++ G+LL+ ++ L DL L + + +++D FH+
Sbjct: 67 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 126
Query: 84 DQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALE--------HTTI 128
+ G K+ + D+ ERI+ ++ P + ++ G++ ++ H +
Sbjct: 127 -RFGRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 185
Query: 129 ELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
E G DRPGLL E+ +++D +V AE+ T
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDT 227
>gi|423127483|ref|ZP_17115162.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5250]
gi|376394522|gb|EHT07172.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5250]
Length = 887
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 SKPMILLSSHATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R +I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEMIRVGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LSKPMILLSSHATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +S+R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEMIRVGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|415777475|ref|ZP_11488704.1| protein-P-II uridylyltransferase [Escherichia coli 3431]
gi|315616350|gb|EFU96968.1| protein-P-II uridylyltransferase [Escherichia coli 3431]
Length = 890
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|16128160|ref|NP_414709.1| uridylyltransferase [Escherichia coli str. K-12 substr. MG1655]
gi|170079803|ref|YP_001729123.1| PII uridylyl-transferase [Escherichia coli str. K-12 substr. DH10B]
gi|238899565|ref|YP_002925361.1| PII uridylyl-transferase [Escherichia coli BW2952]
gi|300949802|ref|ZP_07163775.1| protein-P-II uridylyltransferase [Escherichia coli MS 116-1]
gi|300956049|ref|ZP_07168375.1| protein-P-II uridylyltransferase [Escherichia coli MS 175-1]
gi|301646488|ref|ZP_07246365.1| protein-P-II uridylyltransferase [Escherichia coli MS 146-1]
gi|331640621|ref|ZP_08341769.1| protein-P-II uridylyltransferase [Escherichia coli H736]
gi|386279211|ref|ZP_10056899.1| [protein-PII] uridylyltransferase [Escherichia sp. 4_1_40B]
gi|386596940|ref|YP_006093340.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli DH1]
gi|386612330|ref|YP_006131996.1| PII uridylyltransferase GlnD [Escherichia coli UMNK88]
gi|387610639|ref|YP_006113755.1| [protein-PII] uridylyltransferase [Escherichia coli ETEC H10407]
gi|387619934|ref|YP_006127561.1| PII uridylyl-transferase [Escherichia coli DH1]
gi|388476285|ref|YP_488469.1| uridylyltransferase [Escherichia coli str. K-12 substr. W3110]
gi|417260536|ref|ZP_12048034.1| protein-P-II uridylyltransferase [Escherichia coli 2.3916]
gi|417279585|ref|ZP_12066891.1| protein-P-II uridylyltransferase [Escherichia coli 3.2303]
gi|417293130|ref|ZP_12080410.1| protein-P-II uridylyltransferase [Escherichia coli B41]
gi|417611177|ref|ZP_12261653.1| protein-P-II uridylyltransferase [Escherichia coli STEC_EH250]
gi|417616506|ref|ZP_12266945.1| protein-P-II uridylyltransferase [Escherichia coli G58-1]
gi|417632645|ref|ZP_12282868.1| protein-P-II uridylyltransferase [Escherichia coli STEC_S1191]
gi|417944187|ref|ZP_12587431.1| PII uridylyl-transferase [Escherichia coli XH140A]
gi|417975923|ref|ZP_12616719.1| PII uridylyl-transferase [Escherichia coli XH001]
gi|418301053|ref|ZP_12912847.1| protein-P-II uridylyltransferase [Escherichia coli UMNF18]
gi|418959616|ref|ZP_13511514.1| protein-P-II uridylyltransferase [Escherichia coli J53]
gi|419140536|ref|ZP_13685295.1| protein-P-II uridylyltransferase [Escherichia coli DEC6A]
gi|419146108|ref|ZP_13690806.1| protein-P-II uridylyltransferase [Escherichia coli DEC6B]
gi|419152007|ref|ZP_13696599.1| protein-P-II uridylyltransferase [Escherichia coli DEC6C]
gi|419157423|ref|ZP_13701954.1| protein-P-II uridylyltransferase [Escherichia coli DEC6D]
gi|419162429|ref|ZP_13706910.1| protein-P-II uridylyltransferase [Escherichia coli DEC6E]
gi|419173552|ref|ZP_13717414.1| protein-P-II uridylyltransferase [Escherichia coli DEC7B]
gi|419812929|ref|ZP_14337789.1| PII uridylyl-transferase [Escherichia coli O32:H37 str. P4]
gi|422772911|ref|ZP_16826597.1| protein-P-II uridylyltransferase [Escherichia coli E482]
gi|422792818|ref|ZP_16845517.1| protein-P-II uridylyltransferase [Escherichia coli TA007]
gi|422816182|ref|ZP_16864397.1| [protein-PII] uridylyltransferase [Escherichia coli M919]
gi|425113487|ref|ZP_18515342.1| protein-P-II uridylyltransferase [Escherichia coli 8.0566]
gi|425118238|ref|ZP_18519992.1| protein-P-II uridylyltransferase [Escherichia coli 8.0569]
gi|425270875|ref|ZP_18662400.1| protein-P-II uridylyltransferase [Escherichia coli TW15901]
gi|425281498|ref|ZP_18672629.1| protein-P-II uridylyltransferase [Escherichia coli TW00353]
gi|432415118|ref|ZP_19657753.1| [protein-PII] uridylyltransferase [Escherichia coli KTE44]
gi|432578879|ref|ZP_19815315.1| [protein-PII] uridylyltransferase [Escherichia coli KTE56]
gi|432625725|ref|ZP_19861714.1| [protein-PII] uridylyltransferase [Escherichia coli KTE77]
gi|432635485|ref|ZP_19871375.1| [protein-PII] uridylyltransferase [Escherichia coli KTE81]
gi|432689950|ref|ZP_19925204.1| [protein-PII] uridylyltransferase [Escherichia coli KTE161]
gi|432702709|ref|ZP_19937841.1| [protein-PII] uridylyltransferase [Escherichia coli KTE171]
gi|432735630|ref|ZP_19970422.1| [protein-PII] uridylyltransferase [Escherichia coli KTE42]
gi|432952823|ref|ZP_20145566.1| [protein-PII] uridylyltransferase [Escherichia coli KTE197]
gi|450238435|ref|ZP_21898863.1| PII uridylyl-transferase [Escherichia coli S17]
gi|544396|sp|P27249.2|GLND_ECOLI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229487473|sp|B1XD36.1|GLND_ECODH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492001|sp|C4ZRQ9.1|GLND_ECOBW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|1552744|gb|AAB08596.1| PII uridylyl-transferase [Escherichia coli]
gi|1786363|gb|AAC73278.1| uridylyltransferase [Escherichia coli str. K-12 substr. MG1655]
gi|85674365|dbj|BAE76045.1| uridylyltransferase [Escherichia coli str. K12 substr. W3110]
gi|169887638|gb|ACB01345.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli str.
K-12 substr. DH10B]
gi|238863774|gb|ACR65772.1| uridylyltransferase [Escherichia coli BW2952]
gi|260450629|gb|ACX41051.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli DH1]
gi|300317113|gb|EFJ66897.1| protein-P-II uridylyltransferase [Escherichia coli MS 175-1]
gi|300450800|gb|EFK14420.1| protein-P-II uridylyltransferase [Escherichia coli MS 116-1]
gi|301075314|gb|EFK90120.1| protein-P-II uridylyltransferase [Escherichia coli MS 146-1]
gi|309700375|emb|CBI99663.1| [protein-PII] uridylyltransferase [Escherichia coli ETEC H10407]
gi|315134857|dbj|BAJ42016.1| PII uridylyl-transferase [Escherichia coli DH1]
gi|323939958|gb|EGB36156.1| protein-P-II uridylyltransferase [Escherichia coli E482]
gi|323970646|gb|EGB65902.1| protein-P-II uridylyltransferase [Escherichia coli TA007]
gi|331040367|gb|EGI12574.1| protein-P-II uridylyltransferase [Escherichia coli H736]
gi|332341499|gb|AEE54833.1| PII uridylyltransferase GlnD [Escherichia coli UMNK88]
gi|339413151|gb|AEJ54823.1| protein-P-II uridylyltransferase [Escherichia coli UMNF18]
gi|342364015|gb|EGU28118.1| PII uridylyl-transferase [Escherichia coli XH140A]
gi|344194321|gb|EGV48395.1| PII uridylyl-transferase [Escherichia coli XH001]
gi|345367151|gb|EGW99238.1| protein-P-II uridylyltransferase [Escherichia coli STEC_EH250]
gi|345383640|gb|EGX13513.1| protein-P-II uridylyltransferase [Escherichia coli G58-1]
gi|345391442|gb|EGX21232.1| protein-P-II uridylyltransferase [Escherichia coli STEC_S1191]
gi|359331025|dbj|BAL37472.1| uridylyltransferase [Escherichia coli str. K-12 substr. MDS42]
gi|378000719|gb|EHV63785.1| protein-P-II uridylyltransferase [Escherichia coli DEC6A]
gi|378002544|gb|EHV65595.1| protein-P-II uridylyltransferase [Escherichia coli DEC6B]
gi|378004131|gb|EHV67160.1| protein-P-II uridylyltransferase [Escherichia coli DEC6C]
gi|378015589|gb|EHV78483.1| protein-P-II uridylyltransferase [Escherichia coli DEC6D]
gi|378017577|gb|EHV80449.1| protein-P-II uridylyltransferase [Escherichia coli DEC6E]
gi|378039043|gb|EHW01548.1| protein-P-II uridylyltransferase [Escherichia coli DEC7B]
gi|384377837|gb|EIE35730.1| protein-P-II uridylyltransferase [Escherichia coli J53]
gi|385154228|gb|EIF16244.1| PII uridylyl-transferase [Escherichia coli O32:H37 str. P4]
gi|385540581|gb|EIF87402.1| [protein-PII] uridylyltransferase [Escherichia coli M919]
gi|386123800|gb|EIG72389.1| [protein-PII] uridylyltransferase [Escherichia sp. 4_1_40B]
gi|386225694|gb|EII48019.1| protein-P-II uridylyltransferase [Escherichia coli 2.3916]
gi|386237684|gb|EII74628.1| protein-P-II uridylyltransferase [Escherichia coli 3.2303]
gi|386252702|gb|EIJ02393.1| protein-P-II uridylyltransferase [Escherichia coli B41]
gi|408200406|gb|EKI25587.1| protein-P-II uridylyltransferase [Escherichia coli TW15901]
gi|408206721|gb|EKI31493.1| protein-P-II uridylyltransferase [Escherichia coli TW00353]
gi|408573865|gb|EKK49671.1| protein-P-II uridylyltransferase [Escherichia coli 8.0566]
gi|408574454|gb|EKK50224.1| protein-P-II uridylyltransferase [Escherichia coli 8.0569]
gi|430944543|gb|ELC64636.1| [protein-PII] uridylyltransferase [Escherichia coli KTE44]
gi|431109835|gb|ELE13785.1| [protein-PII] uridylyltransferase [Escherichia coli KTE56]
gi|431166077|gb|ELE66404.1| [protein-PII] uridylyltransferase [Escherichia coli KTE77]
gi|431174751|gb|ELE74787.1| [protein-PII] uridylyltransferase [Escherichia coli KTE81]
gi|431232623|gb|ELF28289.1| [protein-PII] uridylyltransferase [Escherichia coli KTE161]
gi|431248110|gb|ELF42319.1| [protein-PII] uridylyltransferase [Escherichia coli KTE171]
gi|431287901|gb|ELF78687.1| [protein-PII] uridylyltransferase [Escherichia coli KTE42]
gi|431472548|gb|ELH52436.1| [protein-PII] uridylyltransferase [Escherichia coli KTE197]
gi|449325750|gb|EMD15652.1| PII uridylyl-transferase [Escherichia coli S17]
Length = 890
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|187731963|ref|YP_001878968.1| PII uridylyl-transferase [Shigella boydii CDC 3083-94]
gi|238689498|sp|B2U309.1|GLND_SHIB3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|187428955|gb|ACD08229.1| protein-P-II uridylyltransferase [Shigella boydii CDC 3083-94]
Length = 890
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|442590844|ref|ZP_21009599.1| [Protein-PII] uridylyltransferase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441608848|emb|CCP95512.1| [Protein-PII] uridylyltransferase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
Length = 890
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|356536361|ref|XP_003536707.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 283
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 26/165 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+ +AT++++ ++ G+LL+ ++ L DL L + + +S++G F +T
Sbjct: 77 PIVLIDQESDSEATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 136
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
+ G K+ + D+ ERI+ ++ P + ++ G++A + ++ R
Sbjct: 137 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 196
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
DRPGLL E+ V++D+ +V AE+ T
Sbjct: 197 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEG 241
>gi|18405098|ref|NP_565908.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|3355486|gb|AAC27848.1| expressed protein [Arabidopsis thaliana]
gi|330254601|gb|AEC09695.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949474|gb|AEP31950.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 411
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 28/354 (7%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT-DQNGNKLSEDDV 95
T++ V+ ++ G L +++ + L I RA S+DG W VF VT D + K+ D +
Sbjct: 21 TVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDSL 80
Query: 96 SERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R+ + SF +S V ++ RDR GLL +V VL++L+ +
Sbjct: 81 KNRLLSACPSCLGSFYFCLQS-NVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 156 AEVW-THNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS 214
+V T + R+ + +IT L T K L VL S ++
Sbjct: 140 VKVMTTPDGRVLDMFFITDAMDLLHTKQRQT--KTCDHLTAVLG--EHGVSCELELAGPE 195
Query: 215 THKERRLHQM--MYADRDYDMN-YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPK 271
+R + + AD + + + SGS+S +K ++TV++ +T++ +RC D+
Sbjct: 196 LESVQRFSSLPPLAADELFGPDGFDISGSSS--NKAVLTVDNQLSPAHTLLQIRCVDQKG 253
Query: 272 LLFDAVCTLTDMQYVVYHATVIAESPEAYQ--EYYIRHVDGNPISSEAE--------RQR 321
L +D + T D + + + + Y+ E ++R DGN I ++
Sbjct: 254 LFYDILRTSKDCDVHIAYGR-FSSKVKGYRNLELFVRGTDGNKIMDPKHQANFCARLKEE 312
Query: 322 VINCLEAAIKRRTSE-----GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
++ L I R + +EL + R + DVT + G+ + AE+
Sbjct: 313 MVCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEI 366
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP-ISSEAE 318
TVV + CPD L + + + A + Y +++ +P I ++
Sbjct: 21 TVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDSL 80
Query: 319 RQRVIN-----------CLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
+ R+++ CL++ + + S + L+ C DR GLL DVT++ E ++ R
Sbjct: 81 KNRLLSACPSCLGSFYFCLQSNVSKPPSLYL-LKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 368 AEV-TTRGSQAVNVFYVVDA 386
+V TT + +++F++ DA
Sbjct: 140 VKVMTTPDGRVLDMFFITDA 159
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
C D +GL S + RI E GLS+TRA+ +T G VF+V +P
Sbjct: 27 CPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSP 73
>gi|452964180|gb|EME69226.1| PII uridylyl-transferase [Magnetospirillum sp. SO-1]
Length = 926
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDN +R T+++V+ ++ G L ++ + ++ L I A+IS+ GE +DVF+V
Sbjct: 827 PPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 886
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G+K+ E+I+ +L
Sbjct: 887 KDVFGHKIEHGRKLEQIKAAL 907
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 123/306 (40%), Gaps = 41/306 (13%)
Query: 35 KATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDD 94
+A +K + R L L D++ I R Y S+ F H+ +L +
Sbjct: 654 RAARVKAAQDSLRSELFRLAWPPEDIEAHIARGY-STYWTTFDTPIHLRHA---RLVREA 709
Query: 95 VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVM 154
+ R ++ PR S R++ T I + D PGL S++ ++ N++
Sbjct: 710 EAVRAPLTVEPRVDSHRAV------------TEIVVYTGDHPGLFSQIAGAMAVSGANIV 757
Query: 155 GAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS 214
A++ T + MA + ++ G D P LAK+ + VL G
Sbjct: 758 DAKIITLANGMALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSG--------------- 802
Query: 215 THKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLF 274
RL + + A + S + + P V V++ + +TVV + DRP LL+
Sbjct: 803 ---RARLDRELAARK----GKLPSRAHVFKVPPRVLVDNKPSRSHTVVEVNGRDRPGLLY 855
Query: 275 DAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIK--- 331
D +T++ + A + +Y++ V G+ I + +++ L AA++
Sbjct: 856 DITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGHKIEHGRKLEQIKAALLAALEDPA 915
Query: 332 RRTSEG 337
RT+ G
Sbjct: 916 ARTAAG 921
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 77 MDVFHVTDQNGNKLSED----DVSERIQQSLGPRARSFRSL------------------R 114
+D F + D +G +S ++Q L RAR R L R
Sbjct: 770 LDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSGRARLDRELAARKGKLPSRAHVFKVPPR 829
Query: 115 RSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
V + + HT +E+ GRDRPGLL ++ ++++ + A + T+ R+ V Y+ +
Sbjct: 830 VLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV-KD 888
Query: 175 ATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANT 208
G I+ L +IK LL L+ + +A T
Sbjct: 889 VFGHKIEHGRKLEQIKAALLAALEDPAARTAAGT 922
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+E+ DR GLL D+T GL ++ A ++T G + V+VFYV D G+ ++
Sbjct: 843 VEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGHKIE 895
>gi|146155|gb|AAA23878.1| uridylyl transferase [Escherichia coli]
Length = 890
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|170021480|ref|YP_001726434.1| PII uridylyl-transferase [Escherichia coli ATCC 8739]
gi|194439141|ref|ZP_03071223.1| protein-P-II uridylyltransferase [Escherichia coli 101-1]
gi|251783726|ref|YP_002998030.1| uridylyl-removing enzyme / uridylyltransferase [Escherichia coli
BL21(DE3)]
gi|253774806|ref|YP_003037637.1| PII uridylyl-transferase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160286|ref|YP_003043394.1| PII uridylyl-transferase [Escherichia coli B str. REL606]
gi|254287089|ref|YP_003052837.1| PII uridylyl-transferase [Escherichia coli BL21(DE3)]
gi|300932120|ref|ZP_07147406.1| protein-P-II uridylyltransferase [Escherichia coli MS 187-1]
gi|312970266|ref|ZP_07784448.1| protein-P-II uridylyltransferase [Escherichia coli 1827-70]
gi|422788402|ref|ZP_16841139.1| protein-P-II uridylyltransferase [Escherichia coli H489]
gi|442597817|ref|ZP_21015595.1| [Protein-PII] uridylyltransferase [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|189041206|sp|B1IQH4.1|GLND_ECOLC RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169756408|gb|ACA79107.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli ATCC 8739]
gi|194421960|gb|EDX37965.1| protein-P-II uridylyltransferase [Escherichia coli 101-1]
gi|242375999|emb|CAQ30681.1| uridylyl-removing enzyme / uridylyltransferase [Escherichia coli
BL21(DE3)]
gi|253325850|gb|ACT30452.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972187|gb|ACT37858.1| PII uridylyl-transferase [Escherichia coli B str. REL606]
gi|253976396|gb|ACT42066.1| PII uridylyl-transferase [Escherichia coli BL21(DE3)]
gi|300460131|gb|EFK23624.1| protein-P-II uridylyltransferase [Escherichia coli MS 187-1]
gi|310337764|gb|EFQ02875.1| protein-P-II uridylyltransferase [Escherichia coli 1827-70]
gi|323959927|gb|EGB55574.1| protein-P-II uridylyltransferase [Escherichia coli H489]
gi|441653482|emb|CCQ03811.1| [Protein-PII] uridylyltransferase [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 890
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|432684046|ref|ZP_19919369.1| [protein-PII] uridylyltransferase [Escherichia coli KTE156]
gi|431225964|gb|ELF23150.1| [protein-PII] uridylyltransferase [Escherichia coli KTE156]
Length = 890
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQDVHQRL 880
>gi|432562087|ref|ZP_19798720.1| [protein-PII] uridylyltransferase [Escherichia coli KTE51]
gi|431101050|gb|ELE06019.1| [protein-PII] uridylyltransferase [Escherichia coli KTE51]
Length = 890
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|425303678|ref|ZP_18693493.1| protein-P-II uridylyltransferase [Escherichia coli N1]
gi|408232729|gb|EKI55897.1| protein-P-II uridylyltransferase [Escherichia coli N1]
Length = 890
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|303290516|ref|XP_003064545.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454143|gb|EEH51450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 271
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 35/190 (18%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++NT + AT++ V + G LL+ L L L I RA +S E ++ F++T
Sbjct: 53 PAVIINNTEDPLATVVTVAFGDVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYIT 112
Query: 84 D-QNGNKLSEDDVSERIQQSL------------------------GPR--------ARSF 110
D + K+++ E I+ ++ G R AR
Sbjct: 113 DARTSEKITKSKTLELIRMTIINNMLQYHPEAADYLVEGQHIEMPGDRDADANPLGARVA 172
Query: 111 RSLRRSVGVQ--AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASV 168
+++ SV V + + + +T DRPGLL ++ A L DL NV+ AE+ T + +
Sbjct: 173 PAVKTSVVVDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDI 232
Query: 169 VYITSEATGL 178
VY+T + L
Sbjct: 233 VYVTYQGGAL 242
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 81/211 (38%), Gaps = 12/211 (5%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D G L + A L L N++ AEV + YIT T I T
Sbjct: 66 TVVTVAFGDVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYITDARTSEKITKSKT 125
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L I+ + ++ V+ H E M DRD D N + A
Sbjct: 126 LELIR---MTIINNMLQYHPEAADYLVEGQHIE------MPGDRDADANPLGARVAPA-V 175
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
K V V++ + + + + DRP LL D V TL D+ V A + P+AY Y+
Sbjct: 176 KTSVVVDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDIVYV 235
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ G S E V N L + RR E
Sbjct: 236 TYQGGALNKSMIE--LVTNALTYHLTRRDIE 264
>gi|406895502|gb|EKD40049.1| hypothetical protein ACD_75C00195G0001, partial [uncultured
bacterium]
Length = 651
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
+V +DN S+ ++I+V +A+ G L + Q + D L I +AYI+++ E +DVF+V D
Sbjct: 564 KVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYVLD 623
Query: 85 QNGNKLSEDDVSERIQQSL 103
G KL ++D + Q L
Sbjct: 624 SRGRKLVDEDFRHEVTQGL 642
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 78/201 (38%), Gaps = 21/201 (10%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
DRPGLL+++ V++ V+ A+++T A G +D D R +
Sbjct: 471 DRPGLLAKICGVMALNNLTVVKAQIFT-------------WADGTVVDVIDV-----RSM 512
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
+ ++ RS N + + H+ H++ R Y G V +++
Sbjct: 513 DGLSFAEKGWRSLNEQLDLAIEHRMGLSHRLY---RKLSSGYGRRSQMVGEVASKVVIDN 569
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ + Y+V+ + D P L+ + D ++ A + E + +Y+ G +
Sbjct: 570 KSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYVLDSRGRKL 629
Query: 314 SSEAERQRVINCLEAAIKRRT 334
E R V L +I R +
Sbjct: 630 VDEDFRHEVTQGLLHSIGRES 650
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
+ I ++SE S +E+ D G L +T+ + GL++ +A + T Q ++VFYV+D
Sbjct: 564 KVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYVLD 623
Query: 386 ASGNPVKSE 394
+ G + E
Sbjct: 624 SRGRKLVDE 632
>gi|429769827|ref|ZP_19301919.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
gi|429186183|gb|EKY27137.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
Length = 896
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 35/253 (13%)
Query: 73 GEWFMDVFHVTDQ--NGNKLS-EDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT-I 128
G+ +F T+ G+ ++ ED +S+ +L RAR + ++ + LE T +
Sbjct: 619 GQLMRALFEATEALFRGDAVTREDPLSD--HPALVERARREGAAVEALPAEGPLESTARV 676
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID--DPDTL 186
+ RDRPGL +++ A LS +V+GA + T + MA V+ + G P +P L
Sbjct: 677 AVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGREPRRL 736
Query: 187 A-KIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
A +K + VLKG R +A+ R + ++
Sbjct: 737 ALLVKAMERAVLKGAR-----TSAMQAPRVSARRAVFEV--------------------- 770
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P+V +++ T V+ + DRP LL D T++ Y A V + A +YI
Sbjct: 771 RPVVRIDADTGTSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYI 830
Query: 306 RHVDGNPISSEAE 318
DG S+A+
Sbjct: 831 TDPDGRKPKSKAK 843
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+ + +E+ DR GLL+D+ R +G S A V + G +AV+ FY+ D G KS+
Sbjct: 782 TSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDPDGRKPKSK 841
Query: 395 T-IESVRKEIGLTILRVKDDAYSKSPPQESGR 425
+E+++ + +L V D ++P +GR
Sbjct: 842 AKLEALKAD----LLEVLD----RAPQGPAGR 865
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D + A +I+V A++ G L +L + ++ R A+++S GE +D F++T
Sbjct: 772 PVVRIDADTGTSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYIT 831
Query: 84 DQNGNKLSEDDVSERIQQSL---------GPRARSFRSLRRSV 117
D +G K E ++ L GP RS +R SV
Sbjct: 832 DPDGRKPKSKAKLEALKADLLEVLDRAPQGPAGRSITPVRASV 874
>gi|220921155|ref|YP_002496456.1| PII uridylyl-transferase [Methylobacterium nodulans ORS 2060]
gi|219945761|gb|ACL56153.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium nodulans ORS
2060]
Length = 1029
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 106 RARSFRSLRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS 163
RAR+F+ + + + AL T +E++G DRPGLL E+ LS L N+ A V T
Sbjct: 912 RARTFQ-VAPDLSIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGE 970
Query: 164 RMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGD 200
R+ V Y+T + TG I PD A I+R ++ V +G+
Sbjct: 971 RVVDVFYVT-DLTGTKITQPDRQATIRRAVMGVFEGE 1006
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P +++DN + + T++++ ++ G L EL L+ L+L I A++++ GE +DVF+VT
Sbjct: 920 PDLSIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVT 979
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K+++ D I++++
Sbjct: 980 DLTGTKITQPDRQATIRRAV 999
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL ++T L++T A V T G + V+VFYV D +G +
Sbjct: 935 LEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTDLTGTKI 986
>gi|320352506|ref|YP_004193845.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
gi|320121008|gb|ADW16554.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
Length = 872
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
+V +DN ++ + T+++V A+ R +L L Q L D L I RA I+++ E +DVF+V
Sbjct: 768 KVVIDNQTSHQYTIVEVYGADSRSTLYHLTQTLADFGLAIHRARIATEVEQLIDVFYVRT 827
Query: 85 QNGNKLSEDDVSERIQQSL 103
Q G+KL++ + ++++ +L
Sbjct: 828 QAGDKLTDVEAMDKVRLTL 846
>gi|23015392|ref|ZP_00055169.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 924
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDN +R T+++V+ ++ G L ++ + ++ L I A+IS+ GE +DVF+V
Sbjct: 826 PPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G+K+ E+I+ +L
Sbjct: 886 KDVFGHKVEHGRKLEQIKAAL 906
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 33/209 (15%)
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
I TG D PGL S++ ++ N++ A++ T + MA + ++ G D P LA
Sbjct: 731 IVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDGGAFDSPAKLA 789
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK- 246
K+ + VL G T +R L A G R+
Sbjct: 790 KLSSCVEQVLSG--------------RTRLDREL-------------AARKGKLPSRAHV 822
Query: 247 ----PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
P V V++ + +TVV + DRP LL+D +T++ + A +
Sbjct: 823 FKVPPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDV 882
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIK 331
+Y++ V G+ + + +++ L AA++
Sbjct: 883 FYVKDVFGHKVEHGRKLEQIKAALLAALE 911
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT +E+ GRDRPGLL ++ + ++++ + A + T+ R+ V Y+ + G ++
Sbjct: 839 HTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYV-KDVFGHKVEHGR 897
Query: 185 TLAKIKRLLLYVLK 198
L +IK LL L+
Sbjct: 898 KLEQIKAALLAALE 911
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+E+ DR GLL D+T GL ++ A ++T G + V+VFYV D G+ V+
Sbjct: 842 VEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKDVFGHKVE 894
>gi|418295712|ref|ZP_12907562.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067045|gb|EHY79788.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 900
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + Q+ D DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ R+QQ+L
Sbjct: 861 TDAHNQPLSDPQFCLRLQQAL 881
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A ++ S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLEAA------IKRRTSEGIS------------ 339
Y + VDG+PI + ER + +I L I+RR +
Sbjct: 749 YIVLDVDGSPIGNNPERIEEIRRGLITALRNPDDYLNIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ V ++F + LSV A++ T G + +VF+V DA P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDAHNQPL 868
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDVDGSPIGNNPERIEEIRRGLITALRNPDDYLNIIQRRV-PRQLKHFAFPPQVTIH 807
Query: 121 AALE--HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
+ T +E+ DRPGLL+ V + D +V A++ T R+ V ++T +A
Sbjct: 808 NDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT-DAHNQ 866
Query: 179 PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
P+ DP ++++ L+ L+ + ++ + +++ +
Sbjct: 867 PLSDPQFCLRLQQALVKELQQENEQLPSPSSILI 900
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 73/190 (38%), Gaps = 26/190 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI + G PI ++P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDVDGSPIGNNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I+R L+ L R+ + +++ R+L +
Sbjct: 765 RIEEIRRGLITAL------RNPDDYLNIIQRRVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL D V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPIS 314
+ P+S
Sbjct: 860 VTDAHNQPLS 869
>gi|49393|emb|CAA79887.1| PII Uridylyl-transferase [Escherichia coli]
Length = 890
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQRTRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|146308076|ref|YP_001188541.1| PII uridylyl-transferase [Pseudomonas mendocina ymp]
gi|421503969|ref|ZP_15950913.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
gi|166990445|sp|A4XWU3.1|GLND_PSEMY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145576277|gb|ABP85809.1| metal dependent phosphohydrolase [Pseudomonas mendocina ymp]
gi|400345070|gb|EJO93436.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
Length = 899
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 245 SKPLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AY 300
S PLV ++ T + G T + + PD+ V ++ + ++ A +I + +
Sbjct: 687 SGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTL 746
Query: 301 QEYYIRHVDG-----NPISSEAERQRVINCLE------AAIKRRTSEGIS---------- 339
Y + DG NP + R+ +I L+ I+RR +
Sbjct: 747 DTYVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 340 ----------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
LEL DR GLL+ + RIF E LS+ A++ T G + +VF+V DA+
Sbjct: 807 HNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTDANNQ 866
Query: 390 PV 391
P+
Sbjct: 867 PL 868
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 12 DEFEKLVLRMNP---------PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
DE+ ++ R P P+VT+ N + R T++++ + ++ G L + ++ + DL
Sbjct: 781 DEYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 63 IIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
++ A I++ GE DVF VTD N LS+ ++ R+Q+++
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCARLQETI 881
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKLSED------------------DVSERIQQSLGPRARSFRSLRRSVGVQ- 120
+ V D +G + ++ D I Q PR + V +
Sbjct: 749 YVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +ELT DRPGLL+ + + + ++ A++ T R+ V ++T +A P
Sbjct: 809 DAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVT-DANNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP+ A+++
Sbjct: 868 LSDPELCARLQ 878
>gi|357030239|ref|ZP_09092200.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
gi|355532907|gb|EHH02254.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
Length = 933
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 95 VSERIQQSLGPR--ARSFR-SLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKC 151
+ E I++ PR A+ FR R + + + IE+ G DRPGLLSE+ LSDL
Sbjct: 813 LPEMIEKRTKPRRGAKVFRIPPRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSL 872
Query: 152 NVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
++ A + T ++ Y+T + TG ID P +A I + L+ L+G +R+ +
Sbjct: 873 DIASAHITTFGEKVIDTFYVT-DLTGQKIDSPTRMATIHKRLIETLEGTAPERNGKAKAA 931
Query: 212 VD 213
+
Sbjct: 932 AE 933
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPR + NT + + ++I+++ ++ G L E+ L+DL L I A+I++ GE +D F+V
Sbjct: 833 PPRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 83 TDQNGNKL 90
TD G K+
Sbjct: 893 TDLTGQKI 900
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLLS++T + L + A +TT G + ++ FYV D +G + S T
Sbjct: 849 IEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPT 904
>gi|159484292|ref|XP_001700192.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272508|gb|EDO98307.1| predicted protein [Chlamydomonas reinhardtii]
Length = 273
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 35/189 (18%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +DN + AT++ V+ K LL+ V L +L L IRRA I SDG VF++T
Sbjct: 67 PTVKIDNVVDPFATVLTVEFGEKNVELLDAVSALKNLGLNIRRATI-SDGST---VFYIT 122
Query: 84 DQN-GNKLSE----DDVSERIQQSLGPR----ARSFRSLRRS-------VGVQAALEHTT 127
D + K+ + +D+ I SL + +F S ++ +G + + TT
Sbjct: 123 DADTSEKIVKSARLEDIRMTILNSLVDKFPEVGEAFASGSKTDSEPNKVLGTRRRVVQTT 182
Query: 128 IELT-------------GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
I++T DRPGLL ++ VL D+ NV+ AE+ T +IT
Sbjct: 183 IDVTEAKNGVCSLLRIVTSDRPGLLVDIVRVLKDINLNVVSAEIETEGPLAKDEFFITYH 242
Query: 175 ATGLPIDDP 183
G P++ P
Sbjct: 243 --GEPLNSP 249
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368
D P R+RV+ + + L + DR GLL D+ R+ ++ L+V A
Sbjct: 165 DSEPNKVLGTRRRVVQTTIDVTEAKNGVCSLLRIVTSDRPGLLVDIVRVLKDINLNVVSA 224
Query: 369 EVTTRGSQAVNVFYVVDASGNPVKSETI 396
E+ T G A + F++ G P+ S +
Sbjct: 225 EIETEGPLAKDEFFIT-YHGEPLNSPMV 251
>gi|421617884|ref|ZP_16058866.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
gi|409780129|gb|EKN59772.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
Length = 900
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + Q+ D DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ R+QQ+L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A ++ S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + DG+PI + ER + + N L A I+RR +
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRNGLITALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ V ++F + LSV A++ T G + +VF+V DA P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G+ + + ERI++ + R+ ++R V Q L+H
Sbjct: 749 YIVLDADGSPIGNN--PERIEEIRNGLITALRNPDDYLTIIQRRVPRQ--LKHFAFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+ DRPGLL+ V + D +V A++ T R+ V ++T +A
Sbjct: 805 TIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
P+ DP ++++ L+ L+ + +++ + +++ +
Sbjct: 864 DNQPLSDPQFCLRLQQALVKELQQENEQQPSPSSIVI 900
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 26/190 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI +A G PI ++P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGNNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I+ L+ L R+ + +++ R+L +
Sbjct: 765 RIEEIRNGLITAL------RNPDDYLTIIQRRVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL D V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPIS 314
+ D P+S
Sbjct: 860 VTDADNQPLS 869
>gi|15964149|ref|NP_384502.1| PII uridylyl-transferase [Sinorhizobium meliloti 1021]
gi|334314799|ref|YP_004547418.1| UTP-GlnB uridylyltransferase GlnD [Sinorhizobium meliloti AK83]
gi|384528136|ref|YP_005712224.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|384534494|ref|YP_005718579.1| protein GlnD [Sinorhizobium meliloti SM11]
gi|407719238|ref|YP_006838900.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|418400279|ref|ZP_12973821.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|433612182|ref|YP_007188980.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
gi|7387710|sp|P56884.1|GLND_RHIME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|7188745|gb|AAF37852.1|AF227730_2 uridylyltransferase [Sinorhizobium meliloti]
gi|15073325|emb|CAC41833.1| Protein-PII uridylyltransferase [Sinorhizobium meliloti 1021]
gi|333810312|gb|AEG02981.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|334093793|gb|AEG51804.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti AK83]
gi|336031386|gb|AEH77318.1| GlnD [Sinorhizobium meliloti SM11]
gi|359505748|gb|EHK78268.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|407317470|emb|CCM66074.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|429550372|gb|AGA05381.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
Length = 949
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ NT + K T+I+V+ ++ G L E+ VL+DL L I A+I++ GE +D F+VT
Sbjct: 831 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARS 109
D G+K++ SE Q ++ R ++
Sbjct: 891 DLVGSKIT----SENRQMNIAARLKA 912
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DR GLLSEV AVLSDL ++ A + T ++ Y+T + G I +
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT-DLVGSKITSENR 902
Query: 186 LAKIKRLLLYVLKGDRDK 203
I L VL G+ D+
Sbjct: 903 QMNIAARLKAVLAGEVDE 920
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
DR GLLS+VT + + L + A +TT G + ++ FYV D G+ + SE
Sbjct: 852 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKITSE 900
>gi|374703800|ref|ZP_09710670.1| PII uridylyl-transferase [Pseudomonas sp. S9]
Length = 900
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRVT+ N + R T+I++ + ++ G L + ++ D DL I+ A I++ GE DVF VT
Sbjct: 802 PRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N +LS+ ++ R+Q+++
Sbjct: 862 DANNQQLSDPELCTRLQETI 881
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 35/176 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + D+ V + + ++ A ++ + + +
Sbjct: 689 PLVLIKETTQREFEGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCL------EAAIKRRTSEGIS------------ 339
YI + NP + RQ +I+ L + I+RR +
Sbjct: 749 YIVLEGDGSSIGDNPARIKQIRQGLIDALINPDDYPSIIQRRVPRQLKHFDFAPRVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
+EL DR GLL+ V RIF + LS+ A++ T G + +VF+V DA+
Sbjct: 809 DAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTDAN 864
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T + + + ++ V + L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V + +G+ + + DD IQ+ + + + F + R ++
Sbjct: 749 YIVLEGDGSSIGDNPARIKQIRQGLIDALINPDDYPSIIQRRVPRQLKHFDFAPRVTIHN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T IELT DRPGLL+ V + D ++ A++ T R+ V ++T +A
Sbjct: 809 DAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVT-DANNQQ 867
Query: 180 IDDPDTLAKIK 190
+ DP+ +++
Sbjct: 868 LSDPELCTRLQ 878
>gi|402850071|ref|ZP_10898284.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
gi|402499632|gb|EJW11331.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
Length = 938
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 106 RARSFR-SLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSR 164
R R FR SV Q + +T +E++G DRPGLL E+ + LS L N+ A V T R
Sbjct: 831 RTRPFRVEPEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGER 890
Query: 165 MASVVYITSEATGLPIDDPDTLAKIKRLLL 194
V YIT + G I P +A IKR LL
Sbjct: 891 AVDVFYIT-DLMGARITSPTRIATIKRALL 919
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V+V+N + + T+++V ++ G L EL L+ L+L I A++++ GE +DVF++T
Sbjct: 839 PEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYIT 898
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 899 DLMGARITSPTRIATIKRAL 918
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D P LLS + + N++ A+++T GL +D
Sbjct: 741 TVLTVLAPDHPWLLSVIAGACASAGANIVDAQIYTTTD-------------GLALDTISV 787
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVD-STHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +R D +R+ +++ + E RL +MM A R+ A+ + R
Sbjct: 788 SREFER------DDDEGRRAGRVVDALERALRGEMRLPEMMAAKRN-----AKGRTRPFR 836
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
+P V+V + YTVV + DRP LL++ TL+ + + A V A +Y
Sbjct: 837 VEPEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFY 896
Query: 305 IRHVDGNPISS 315
I + G I+S
Sbjct: 897 ITDLMGARITS 907
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DR GLL ++T + L++T A V T G +AV+VFY+ D G + S T I +
Sbjct: 854 VEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITDLMGARITSPTRIAT 913
Query: 399 VRKEIGL 405
+++ + L
Sbjct: 914 IKRALLL 920
>gi|393765065|ref|ZP_10353658.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
gi|392729489|gb|EIZ86761.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
Length = 935
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 106 RARSFRSLRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS 163
RA++F + VG+ AL T +E+TG DRPGLL E+ L N+ A V T
Sbjct: 820 RAKTF-LVPPDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGE 878
Query: 164 RMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGD 200
R V Y+T + TG + PD A I++ +L V GD
Sbjct: 879 RAVDVFYVT-DLTGTRVTQPDRQAAIRKAMLDVFAGD 914
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V +DN + + T+++V ++ G L EL L L I A++++ GE +DVF+V
Sbjct: 827 PPDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYV 886
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G ++++ D I++++
Sbjct: 887 TDLTGTRVTQPDRQAAIRKAM 907
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV-KSETIES 398
+E+ DR GLL ++T F L++T A V T G +AV+VFYV D +G V + + +
Sbjct: 843 VEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTDLTGTRVTQPDRQAA 902
Query: 399 VRKEI------GLTILRVK--DDAYSKSPPQES 423
+RK + + +LR + + + PP+E+
Sbjct: 903 IRKAMLDVFAGDVAMLRAEGLEALVAAPPPREA 935
>gi|452747344|ref|ZP_21947141.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
gi|452008865|gb|EME01101.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
Length = 900
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + Q+ D DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ R+QQ+L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A ++ S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + DG+PI + ER + + + L AA I+RR +
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ V ++F + LSV A++ T G + +VF+V DA P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G+ + + ERI++ + R+ ++R V Q L+H
Sbjct: 749 YIVLDADGSPIGNN--PERIEEIRSGLIAALRNPDDYLTIIQRRVPRQ--LKHFAFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+ DRPGLL+ V + D +V A++ T R+ V ++T +A
Sbjct: 805 TIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
P+ DP ++++ L+ L+ + +++ + +++ +
Sbjct: 864 DNQPLSDPQFCLRLQQALVKELQQENEQQPSPSSILI 900
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 26/190 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI +A G PI ++P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGNNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I+ L+ L R+ + +++ R+L +
Sbjct: 765 RIEEIRSGLIAAL------RNPDDYLTIIQRRVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL D V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPIS 314
+ D P+S
Sbjct: 860 VTDADNQPLS 869
>gi|431927945|ref|YP_007240979.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
gi|431826232|gb|AGA87349.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
Length = 900
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + Q+ D DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ R+QQ+L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A ++ S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + DG+PI + ER + L AA I+RR +
Sbjct: 749 YIVLDADGSPIGNNPERIDEIRKGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ V ++F + LSV A++ T G + +VF+V DA P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDADGSPIGNNPERIDEIRKGLIAALRNPDDYLTIIQRRV-PRQLKHFAFPPQVTIH 807
Query: 121 AALE--HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
+ T +E+ DRPGLL+ V + D +V A++ T R+ V ++T +A
Sbjct: 808 NDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT-DADNQ 866
Query: 179 PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
P+ DP ++++ L+ L+ + +++ + +++ +
Sbjct: 867 PLSDPQFCLRLQQALIKELQQENEQQPSPSSIVI 900
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 29/212 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI +A G PI ++P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGNNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I++ L+ L R+ + +++ R+L +
Sbjct: 765 RIDEIRKGLIAAL------RNPDDYLTIIQRRVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL D V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ D P+S + Q + +A IK E
Sbjct: 860 VTDADNQPLS---DPQFCLRLQQALIKELQQE 888
>gi|392420714|ref|YP_006457318.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
gi|390982902|gb|AFM32895.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
Length = 900
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + Q+ D DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ R+QQ+L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A ++ S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + DG+PI + +R + + + L AA I+RR +
Sbjct: 749 YIVLDADGSPIGNNPKRIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ V ++F + LSV A++ T G + +VF+V DA P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDADGSPIGNNPKRIEEIRSGLIAALRNPDDYLTIIQRRV-PRQLKHFAFPPQVTIH 807
Query: 121 AALE--HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
+ T +E+ DRPGLL+ V + D +V A++ T R+ V ++T +A
Sbjct: 808 NDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT-DADNQ 866
Query: 179 PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
P+ DP ++++ L+ L+ + +++ + +++ +
Sbjct: 867 PLSDPQFCLRLQQALVKELQQENEQQPSPSSILI 900
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 26/190 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI +A G PI ++P
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGNNPK 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I+ L+ L R+ + +++ R+L +
Sbjct: 765 RIEEIRSGLIAAL------RNPDDYLTIIQRRVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL D V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPIS 314
+ D P+S
Sbjct: 860 VTDADNQPLS 869
>gi|170740425|ref|YP_001769080.1| PII uridylyl-transferase [Methylobacterium sp. 4-46]
gi|168194699|gb|ACA16646.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium sp. 4-46]
Length = 936
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E++G DRPGLL ++ LS L N+ A V T R V Y+T + TG I PD
Sbjct: 835 TVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVT-DLTGTKITQPDR 893
Query: 186 LAKIKRLLLYVLKGD 200
A I+R ++ V +GD
Sbjct: 894 QATIRRAVMGVFEGD 908
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P +++DN + + T++++ ++ G L +L L+ L+L I A++++ GE +DVF+VT
Sbjct: 822 PDLSIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVT 881
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K+++ D I++++
Sbjct: 882 DLTGTKITQPDRQATIRRAV 901
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
LE+ DR GLL D+T L++T A V T G +AV+VFYV D +G + ++
Sbjct: 837 LEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVTDLTGTKITQPDRQAT 896
Query: 400 RKEIGLTILRVKDDAYSKSPP 420
+ + + + DA + PP
Sbjct: 897 IRRAVMGVF--EGDAAAARPP 915
>gi|326499446|dbj|BAJ86034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+R AT++++ ++ G+LL+ ++ L DL L + + +++D FH+
Sbjct: 108 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 167
Query: 84 DQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR--- 133
+ G K+ + D+ E I+ ++ P + ++ G++A + +E+
Sbjct: 168 -RLGRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPEKKVDVEVATHVIV 226
Query: 134 ---------------DRPGLLSEVFAVLSDLKCNVMGAEVWT 160
DRPGLL EV +++D+ +V AE+ T
Sbjct: 227 QDDGPKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDT 268
>gi|304393801|ref|ZP_07375726.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
gi|303294000|gb|EFL88375.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
Length = 967
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+DN ++ K T+I++++ ++ G L + L DL L I A+I++ GE F+D F+VT
Sbjct: 860 PKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVT 919
Query: 84 DQNGNKL 90
D G+K+
Sbjct: 920 DLVGSKI 926
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I L D P LLS + V + N+ AE++T + R +++ G DDPD
Sbjct: 762 TEITLVAPDHPRLLSTITGVCAASGANIEDAEIYTMKDGRALDSIFV-----GRLYDDPD 816
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHK-ERRLHQMMYADRDYDMNYAESGSASG 243
D +R+ N A +++ + E+RL ++ +++G +
Sbjct: 817 ---------------DEKRRARNIADTIEKVLRGEKRLSEL----------ESQAGKPAR 851
Query: 244 RSK-----PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
R + P VT+++ +TV+ L DR +L TL D+ + A + +
Sbjct: 852 RQQAFTITPKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEK 911
Query: 299 AYQEYYIRHVDGNPISSE 316
+Y+ + G+ I +E
Sbjct: 912 FVDTFYVTDLVGSKILNE 929
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL DR+G+LS +T + L + A + T G + V+ FYV D G+ + +E +
Sbjct: 875 IELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTDLVGSKILNEERLDI 934
Query: 400 RKEIGLTILRVKDDAYSKSPP 420
+ L +L A K PP
Sbjct: 935 ARATLLEVLENNAHAKPKRPP 955
>gi|146281909|ref|YP_001172062.1| PII uridylyl-transferase [Pseudomonas stutzeri A1501]
gi|339493516|ref|YP_004713809.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020180|ref|YP_005938204.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|189041209|sp|A4VJR9.1|GLND_PSEU5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145570114|gb|ABP79220.1| protein-PII uridylyltransferase [Pseudomonas stutzeri A1501]
gi|327480152|gb|AEA83462.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|338800888|gb|AEJ04720.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 900
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + Q+ D DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+QQ++
Sbjct: 861 TDADNQPLSDPQLCLRLQQAI 881
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A ++ S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + DG+PI + ER + + + L AA I+RR +
Sbjct: 749 YIVLEADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ V ++F + LSV A++ T G + +VF+V DA P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 29/212 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI EA G PI ++P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLEADGSPIGNNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I+ L+ L R+ + +++ R+L +
Sbjct: 765 RIEEIRSGLIAAL------RNPDDYLTIIQRRVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL D V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ D P+S + Q + +A IK E
Sbjct: 860 VTDADNQPLS---DPQLCLRLQQAIIKELQQE 888
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V + +G+ + + ERI++ + R+ ++R V Q L+H
Sbjct: 749 YIVLEADGSPIGNN--PERIEEIRSGLIAALRNPDDYLTIIQRRVPRQ--LKHFAFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+ DRPGLL+ V + D +V A++ T R+ V ++T +A
Sbjct: 805 TIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
P+ DP ++++ ++ L+ + +++ + +++ +
Sbjct: 864 DNQPLSDPQLCLRLQQAIIKELQQENEQQPSPSSIVI 900
>gi|443469603|ref|ZP_21059757.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
gi|442899055|gb|ELS25586.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
Length = 900
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ + G T + + PD+ V ++ + ++ A +I + +
Sbjct: 689 PLVLIKETAQREFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 303 YYIRHVDG-----NPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG NP R+ +I+ L+ A I+RR +
Sbjct: 749 YIVLDADGGRIGDNPARIREIREGLIDALKNPDDYPAIIQRRVPRQLKHFAFPPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + RIF E LS+ A++ T G + +VF+V DA+ P+
Sbjct: 809 DAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVTDANNQPL 868
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD N LS+ ++ R+Q ++
Sbjct: 861 TDANNQPLSDPELCRRLQDAI 881
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 25/193 (12%)
Query: 22 NPPRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFM 77
N P V + T+ R+ AT I + + ++ V ++ L+L I A I+S ++ +
Sbjct: 687 NDPLVLIKETAQREFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTL 746
Query: 78 DVFHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSV 117
D + V D +G ++ + DD IQ+ + + + F + ++
Sbjct: 747 DTYIVLDADGGRIGDNPARIREIREGLIDALKNPDDYPAIIQRRVPRQLKHFAFPPQVTI 806
Query: 118 GVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
A T +EL DRPGLL+ + + + ++ A++ T R+ V ++T +A
Sbjct: 807 SNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVT-DANN 865
Query: 178 LPIDDPDTLAKIK 190
P+ DP+ +++
Sbjct: 866 QPLSDPELCRRLQ 878
>gi|51244781|ref|YP_064665.1| [protein-PII] uridylyltransferase [Desulfotalea psychrophila LSv54]
gi|50875818|emb|CAG35658.1| probable [Protein-PII] uridylyltransferase [Desulfotalea
psychrophila LSv54]
Length = 856
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV VDN S+ ++++V + ++ L L Q L D + I +AYI+++ E +DVF+V
Sbjct: 768 PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVL 827
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G KL D + E I Q+L
Sbjct: 828 DSRGEKLLGDSLREDIVQAL 847
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 27/239 (11%)
Query: 90 LSEDDVSERIQQSLGPRARSFRSLRRS--VGVQAALEHTTIELTGRDRPGLLSEVFAVLS 147
S +DV +Q L + R LR+ V V + I L DRPGLL+++ VL+
Sbjct: 634 FSSEDVLAHVQLCLQHQ----RLLRQKSLVKVFEGEDDWKILLMSHDRPGLLAKLCGVLA 689
Query: 148 DLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSAN 207
V A+++T + I T P D D+D S
Sbjct: 690 LHNLAVAMAQIFTWEDGV-----IVDVVTVRPQDGAGF-------------SDKDWDSFR 731
Query: 208 TAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCP 267
+ + +H+ H++ + + Y G P V V++ + Y+V+ +
Sbjct: 732 ADIDLALSHRLDLGHKLY---QKWQTTYGRKAELVGAIDPRVVVDNESSDTYSVLEVYAV 788
Query: 268 DRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCL 326
DRP LL+ TL D +Y A + E + +Y+ G + ++ R+ ++ L
Sbjct: 789 DRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVLDSRGEKLLGDSLREDIVQAL 847
>gi|429082373|ref|ZP_19145447.1| [Protein-PII] uridylyltransferase [Cronobacter condimenti 1330]
gi|426548926|emb|CCJ71488.1| [Protein-PII] uridylyltransferase [Cronobacter condimenti 1330]
Length = 891
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SQPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLS--ADRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVDTEVNFLPT 810
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 811 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGLN 870
Query: 393 SETIESVRKEI 403
+ + VR+ +
Sbjct: 871 NLLQQEVRQRL 881
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSQPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLS-----------EDDVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS E +++R Q PR + R V HT
Sbjct: 753 FIVLEPDGSPLSADRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVDTEVNFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGL 869
>gi|312113912|ref|YP_004011508.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
gi|311219041|gb|ADP70409.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
Length = 917
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 51/78 (65%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP + +DNT++++ T+I+V + ++ G L +L + +DL L I A+I++ GE +DVF+V
Sbjct: 831 PPDIVIDNTASQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYV 890
Query: 83 TDQNGNKLSEDDVSERIQ 100
T K++++ RI+
Sbjct: 891 TGPGKQKVTDEATKSRIR 908
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
+ E +E+ DR GLL D+ R F + GL + A + T G +AV+VFYV V
Sbjct: 841 SQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYVTGPGKQKVTD 900
Query: 394 ETIES-VRKEI 403
E +S +R +I
Sbjct: 901 EATKSRIRGQI 911
>gi|399035066|ref|ZP_10732590.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
gi|398067164|gb|EJL58707.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
Length = 969
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 909 TDLVGQKISGD 919
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIES 398
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++ S
Sbjct: 865 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKRS 923
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T IE+ DRPGLLSE+ AVLSDL ++ A + T ++ Y+T
Sbjct: 863 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 909
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E DD D
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFK----DDAD 807
Query: 185 TLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L + I R++ VL G ++ ++ + ++++ S
Sbjct: 808 ELRRAGTIGRMIEDVLSG---RKRLPEVIATRTKNRKK--------------------SK 844
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 845 AFVIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 904
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + L+A + E
Sbjct: 905 TFYVTDLVGQKISGDSKRSNITARLKAVMAEEQDE 939
>gi|83313575|ref|YP_423839.1| PII uridylyl-transferase [Magnetospirillum magneticum AMB-1]
gi|82948416|dbj|BAE53280.1| UTP:GlnB (protein PII) uridylyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 929
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDN +R T+++V+ ++ G L ++ + ++ L I A+IS+ GE +DVF+V
Sbjct: 826 PPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G+K+ ++I+ +L
Sbjct: 886 KDVFGHKIEHGRKLDQIKAAL 906
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 118/301 (39%), Gaps = 52/301 (17%)
Query: 35 KATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDD 94
+A IK R L +L D++ I R Y S+ F H+ +L +
Sbjct: 653 RAARIKAAQDALRSELFKLSWPPEDIEAHIARGY-STYWTTFDTPIHLRHA---RLVREA 708
Query: 95 VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVM 154
+ R ++ PR S R++ T I + D PGL S++ ++ N++
Sbjct: 709 EAVRAPLTVEPRVDSHRAV------------TEIIVYTGDHPGLFSQIAGAMAVSGANIV 756
Query: 155 GAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS 214
A++ T + MA + ++ G D P LAK+ + VL G
Sbjct: 757 DAKIITLANGMALDTFCIQDSDGGAFDSPAKLAKLATCVEQVLSG--------------R 802
Query: 215 THKERRLHQMMYADRDYDMNYAESGSASGRSK-----PLVTVESCTDKGYTVVNLRCPDR 269
T +R L A G R+ P V V++ + +TVV + DR
Sbjct: 803 TRLDREL-------------AARKGKLPSRAHVFKVPPRVLVDNMPSRSHTVVEVNGRDR 849
Query: 270 PKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA 329
P LL+D +T++ + A + +Y++ V G+ I E R ++ ++AA
Sbjct: 850 PGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGHKI----EHGRKLDQIKAA 905
Query: 330 I 330
+
Sbjct: 906 L 906
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT +E+ GRDRPGLL ++ ++++ + A + T+ R+ V Y+ + G I+
Sbjct: 839 HTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV-KDVFGHKIEHGR 897
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTA 209
L +IK LL L+ K +A T
Sbjct: 898 KLDQIKAALLAALEDPAAKAAAKTG 922
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL D+T GL ++ A ++T G + V+VFYV D G+ IE
Sbjct: 842 VEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGH-----KIEHG 896
Query: 400 RK--EIGLTILRVKDDAYSKS 418
RK +I +L +D +K+
Sbjct: 897 RKLDQIKAALLAALEDPAAKA 917
>gi|159184269|ref|NP_353378.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
gi|22256761|sp|Q8UIF1.1|GLND_AGRT5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|159139596|gb|AAK86163.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
Length = 942
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP VT+ N + K T+I+V+ ++ G L ++ V+ DL L I A I++ GE +D F+V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G K++ D+ I Q L
Sbjct: 886 TDLFGQKVTNDNRQASIAQRL 906
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V ++
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTND 896
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 44/289 (15%)
Query: 53 LVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ--NGNKLSEDDVSERIQQSLGPRARSF 110
L L D RR Y E ++ + DQ + + E D E+ ++ R SF
Sbjct: 667 LYDALEDWGQKARRKYTKLHYEPYLLTVALEDQVRHTRFMREADKQEKALSTM-VRTHSF 725
Query: 111 RSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVV 169
++ T I + D P LLS + + N+ A+++T + R +
Sbjct: 726 HAI------------TEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRALDTI 773
Query: 170 YITSEATGLPIDDPDTL--AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYA 227
I E PID+ +T A + +L+ VL G ++RL +M+ A
Sbjct: 774 LINRE---FPIDEDETRRGANVGKLIEEVLSG------------------KQRLPEMI-A 811
Query: 228 DRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVV 287
R + ++ P VT+ + +TV+ + C DRP LL D + D+ +
Sbjct: 812 TR----TKSRRKKSAFTIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDI 867
Query: 288 YHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ A + + +Y+ + G ++++ + + L+A + + E
Sbjct: 868 HSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|293334853|ref|NP_001169848.1| uncharacterized protein LOC100383740 [Zea mays]
gi|224031989|gb|ACN35070.1| unknown [Zea mays]
gi|414882134|tpg|DAA59265.1| TPA: hypothetical protein ZEAMMB73_925280 [Zea mays]
Length = 270
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+R AT++++ ++ G+LL+ ++ L DL L + + +++D FH+
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 84 DQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALE--------HTTI 128
+ G K+ + D+ ERI+ ++ P + ++ G++ + H +
Sbjct: 126 -RFGRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 129 ELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
E G DRPGLL E+ +++D +V AE+ T
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDT 226
>gi|218508896|ref|ZP_03506774.1| PII uridylyl-transferase [Rhizobium etli Brasil 5]
Length = 227
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 108 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 167
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 168 TDLVGQKISGD 178
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRS- 112
+ +SDG +D HV+ + + ++ ED +S +R+ + + R R+ +
Sbjct: 44 FTTSDGRA-LDTIHVSREFADDADELRRAGTIGRMIEDVLSGRKRLPEVIATRTRNRKKS 102
Query: 113 ----LRRSVGVQAALEH--TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 103 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 162
Query: 167 SVVYIT 172
Y+T
Sbjct: 163 DTFYVT 168
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 124 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 179
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E DD D
Sbjct: 11 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFA----DDAD 66
Query: 185 TLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L + I R++ VL G +RL +++ A R + +++
Sbjct: 67 ELRRAGTIGRMIEDVLSG------------------RKRLPEVI-ATRTRNRKKSKAFVI 107
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 108 P----PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 163
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 164 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 198
>gi|335033078|ref|ZP_08526450.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
gi|333795754|gb|EGL67079.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
Length = 942
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP VT+ N + K T+I+V+ ++ G L ++ V+ DL L I A I++ GE +D F+V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G K++ D+ I Q L
Sbjct: 886 TDLFGQKVTNDNRQASIAQRL 906
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V ++
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTND 896
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 44/289 (15%)
Query: 53 LVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ--NGNKLSEDDVSERIQQSLGPRARSF 110
L L D RR Y E ++ + DQ + + E D E+ ++ R SF
Sbjct: 667 LYDALEDWGQKARRKYTKLHYEPYLLTVALEDQVRHTRFMREADKQEKALSTM-VRTHSF 725
Query: 111 RSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVV 169
++ T I + D P LLS + + N+ A+++T + R +
Sbjct: 726 HAI------------TEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRALDTI 773
Query: 170 YITSEATGLPIDDPDTL--AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYA 227
I E PID+ +T A + +L+ VL G ++RL +M+ A
Sbjct: 774 LINRE---FPIDEDETRRGANVGKLIEEVLSG------------------KQRLPEMI-A 811
Query: 228 DRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVV 287
R + ++ P VT+ + +TV+ + C DRP LL D + D+ +
Sbjct: 812 TR----TKSRRKKSAFTIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDI 867
Query: 288 YHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ A + + +Y+ + G ++++ + + L+A + + E
Sbjct: 868 HSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|409435802|ref|ZP_11263010.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
gi|408752560|emb|CCM74157.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
Length = 969
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 909 TDLVGQKISGD 919
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIES 398
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++ S
Sbjct: 865 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKRS 923
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T IE+ DRPGLLSE+ AVLSDL ++ A + T ++ Y+T
Sbjct: 863 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 909
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E DD D
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFK----DDAD 807
Query: 185 TLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L + I R++ VL G ++ ++ + ++++ S
Sbjct: 808 ELRRAGTIGRMIEDVLSG---RKRLPEVIATRTKNRKK--------------------SK 844
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 845 AFVIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 904
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + L+A + E
Sbjct: 905 TFYVTDLVGQKISGDSKRSNITARLKAVMAEEQDE 939
>gi|406894154|gb|EKD39032.1| hypothetical protein ACD_75C00526G0001, partial [uncultured
bacterium]
Length = 771
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
+V +DN S+ ++I+V +++ G L + Q + D L I +AYI+++ E +DVF+V D
Sbjct: 684 KVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYVLD 743
Query: 85 QNGNKLSEDDVSERIQQSL 103
G KL ++D + + Q +
Sbjct: 744 SRGQKLVDEDFRQEVTQGI 762
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 21/199 (10%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
DRPGLL+++ V++ V+ A+++T A G +D D A L
Sbjct: 591 DRPGLLAKICGVMALNNLTVVKAQIFTW-------------ADGTVVDVIDVRATDG--L 635
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
+ KG RS N + + H+ H++ R Y +G V +++
Sbjct: 636 GFAEKG---WRSLNEQLDLAIEHRMGLSHRLY---RKLSSGYGRRSQRAGEVASKVVIDN 689
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ + Y+V+ + D P L+ ++ D ++ A + E + +Y+ G +
Sbjct: 690 KSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYVLDSRGQKL 749
Query: 314 SSEAERQRVINCLEAAIKR 332
E RQ V + +I R
Sbjct: 750 VDEDFRQEVTQGILHSIDR 768
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 330 IKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
I ++SE S +E+ D G L +T+ + GL++ +A + T Q ++VFYV+D+ G
Sbjct: 687 IDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYVLDSRG 746
Query: 389 NPVKSETIESVRKEIGLTILRVKD 412
+ E R+E+ IL D
Sbjct: 747 QKLVD---EDFRQEVTQGILHSID 767
>gi|94500620|ref|ZP_01307150.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
gi|94427175|gb|EAT12155.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
Length = 896
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 34/180 (18%)
Query: 246 KPLVTVESCTD---KGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQ 301
KPLV + +D +G T + + D+P L L + + A +I + + A
Sbjct: 690 KPLVLIGETSDLAFEGATQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNALD 749
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G+ I+ +++ + LE A I+RRTS +
Sbjct: 750 TYVVLDENGDSITDPLRLEKIQSTLEEALSNPESFPNLIQRRTSRQLKQFEFEPTAFISN 809
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + ++F + LS+ A++ T + ++FY+ DA+G+P+
Sbjct: 810 DPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYITDANGDPI 869
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 22 NPPRVTVDNTSN---RKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFM 77
+ P V + TS+ AT I + ++ + L+ L L I+ A I+S +
Sbjct: 689 DKPLVLIGETSDLAFEGATQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNAL 748
Query: 78 DVFHVTDQNGNKLSEDDVSERIQQSL-----GPRA-------RSFRSLRRSVGVQAAL-- 123
D + V D+NG+ +++ E+IQ +L P + R+ R L++ A
Sbjct: 749 DTYVVLDENGDSITDPLRLEKIQSTLEEALSNPESFPNLIQRRTSRQLKQFEFEPTAFIS 808
Query: 124 -----EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
+ T +E+ DRPGLL+ + + D ++ A++ T R+ + YIT +A G
Sbjct: 809 NDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYIT-DANGD 867
Query: 179 PIDDPDTLAKIKRLLLYVL 197
PI DP+ ++++ ++ L
Sbjct: 868 PISDPEFCMELQQAVVNAL 886
>gi|407777256|ref|ZP_11124526.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
gi|407300956|gb|EKF20078.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
Length = 934
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV + NT + + ++++V ++ G L EL + L+DL L I A+I++ GE +D F+VT
Sbjct: 832 PRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K+ D E I+++L
Sbjct: 892 DLTGQKIVSPDRLETIRKTL 911
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 88 NKLSEDDVS------ERIQQSLGPR--ARSFRSLRR-SVGVQAALEHTTIELTGRDRPGL 138
KL ED +S E I++ PR ++FR + R +G + + +E+ G DRPGL
Sbjct: 798 GKLIEDVLSGKSYLPEMIEKRAKPRRGTKAFRVVPRVEIGNTLSNRFSVVEVRGLDRPGL 857
Query: 139 LSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
LSE+ LSDL ++ A + T ++ Y+T + TG I PD L I++ LL L+
Sbjct: 858 LSELTETLSDLSLDIASAHITTFGEKVIDTFYVT-DLTGQKIVSPDRLETIRKTLLQTLE 916
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS-ETIESVRKEIG 404
DR GLLS++T + L + A +TT G + ++ FYV D +G + S + +E++RK +
Sbjct: 853 DRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVSPDRLETIRKTLL 912
Query: 405 LTI 407
T+
Sbjct: 913 QTL 915
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 27/211 (12%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T I + D P LLS + S N++ A+++T A + S D+
Sbjct: 734 TEITVFAPDHPRLLSIIAGACSAAGANIVDAQIFTTTHGRALDTILISREFDFDADERRR 793
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
+I +L+ VL G + ++ K RR G+ + R
Sbjct: 794 AERIGKLIEDVLSG-----KSYLPEMIEKRAKPRR------------------GTKAFRV 830
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P V + + ++VV +R DRP LL + TL+D+ + A + + +Y+
Sbjct: 831 VPRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYV 890
Query: 306 RHVDGNPISS----EAERQRVINCLEAAIKR 332
+ G I S E R+ ++ LE+ ++R
Sbjct: 891 TDLTGQKIVSPDRLETIRKTLLQTLESGVER 921
>gi|302381407|ref|YP_003817230.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
gi|302192035|gb|ADK99606.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
Length = 890
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D +++ AT+I+V A++ G L EL + L+D L IR A+++ GE +D F+VT
Sbjct: 769 PVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT 828
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++ + V + + +L
Sbjct: 829 DARGRKITSEAVLDEVHAAL 848
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 334 TSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
SEG + +E+ DR GLL++++R ++ LS+ A V G +AV+ FYV DA G +
Sbjct: 777 ASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTDARGRKIT 836
Query: 393 SETIESVRKEIGLTILRVKDDAYSKSPPQ 421
S E+V E+ + V D A PPQ
Sbjct: 837 S---EAVLDEVHAALEAVLDRA--PEPPQ 860
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P+V ++ +G TV+ + DRP LL + TL+D + A V A +Y+
Sbjct: 768 RPVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYV 827
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKR 332
G I+SEA V LEA + R
Sbjct: 828 TDARGRKITSEAVLDEVHAALEAVLDR 854
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE++G DRPGLL+E+ LSD ++ A V R Y+T +A G I
Sbjct: 782 TVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT-DARGRKITSEAV 840
Query: 186 LAKIKRLLLYVL 197
L ++ L VL
Sbjct: 841 LDEVHAALEAVL 852
>gi|408787213|ref|ZP_11198944.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
gi|408486844|gb|EKJ95167.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
Length = 942
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP VT+ N + K T+I+V+ ++ G L ++ V+ DL L I A I++ GE +D F+V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G K++ D+ I Q L
Sbjct: 886 TDLFGQKVTNDNRQASIAQRL 906
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V ++
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTND 896
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 42/90 (46%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P VT+ + +TV+ + C DRP LL D + D+ ++ A + + +Y+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ G ++++ + + L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|395229079|ref|ZP_10407395.1| PII uridylyl-transferase [Citrobacter sp. A1]
gi|424729178|ref|ZP_18157780.1| pii uridylyl-transferase [Citrobacter sp. L17]
gi|394717132|gb|EJF22830.1| PII uridylyl-transferase [Citrobacter sp. A1]
gi|422895902|gb|EKU35688.1| pii uridylyl-transferase [Citrobacter sp. L17]
Length = 890
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+SS+ R I LE I +R+ +
Sbjct: 752 FIVLEPDGSPLSSD--RHEAIRFGLEQTITQRSWQPPQPRRQPAKLRHFTVDTEVNFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|424909280|ref|ZP_18332657.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845311|gb|EJA97833.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 942
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP VT+ N + K T+I+V+ ++ G L ++ V+ DL L I A I++ GE +D F+V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G K++ D+ I Q L
Sbjct: 886 TDLFGQKVTNDNRQASIAQRL 906
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V ++
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTND 896
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 42/90 (46%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P VT+ + +TV+ + C DRP LL D + D+ ++ A + + +Y+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ G ++++ + + L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|114770139|ref|ZP_01447677.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2255]
gi|114548976|gb|EAU51859.1| PII uridylyl-transferase [alpha proteobacterium HTCC2255]
Length = 931
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + +D PG+ S + ++ NV+ A +T + A+ V+ + G P D
Sbjct: 742 TRAQFVMQDHPGIFSRLTGAIALANANVIDARTYTTSDGYATPVFWIQDNDGKPFD-FSK 800
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDY----DMNYAESGSA 241
L K+K+L+ L GD R + V + +K R +R++ D+ + GS
Sbjct: 801 LGKLKKLIDQTLAGDVIARDV---LKVRNKYKPR--------ERNFKVPTDITFDNQGSD 849
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
YT++ + DR LLFD TL + + A + +A
Sbjct: 850 I----------------YTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVD 893
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK 331
+Y++ + G I+SE ++Q + L+ AI+
Sbjct: 894 VFYVKDMIGLKITSENKQQIIKGKLQEAIE 923
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR LL D+TR + + A + T G+QAV+VFYV D G + SE + +
Sbjct: 854 IEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDMIGLKITSENKQQI 913
Query: 400 RK 401
K
Sbjct: 914 IK 915
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +T DN + T+I+VD+ ++ L +L + L + ++ I A I++ G +DVF+V
Sbjct: 838 PTDITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYV 897
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++ ++ + I+ L
Sbjct: 898 KDMIGLKITSENKQQIIKGKL 918
>gi|114571561|ref|YP_758241.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
gi|114342023|gb|ABI67303.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
Length = 936
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 34/198 (17%)
Query: 257 KGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV-IAESPEAYQEYYIRHVDGNPISS 315
+ T V + PDR ++ D V ++ V AT+ S + + +YI+ G P
Sbjct: 728 RAATEVMIWSPDRERVFADIVAAFAEVGADVVGATINTTTSRQVFDIFYIQDAAGQPYGK 787
Query: 316 E--AERQRVINCLE--------------AAIKRRTS----------------EGISLELC 343
+RQ ++ L A +KRR + + +E
Sbjct: 788 HDAVQRQALVGYLREVATGEVTVRRRPAAPLKRRDAAFRVTPSVTISNEIAEQATVIEAS 847
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEI 403
DR GLL+D+ + + GL++T A++ G +A +VFYV V ESVR +
Sbjct: 848 GRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVTHKDEKLVDEAISESVRNGL 907
Query: 404 GLTILRVKDDAYSKSPPQ 421
L + + A+ K Q
Sbjct: 908 -LAVFSENETAFDKKAAQ 924
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N +AT+I+ ++ G L +L VL D L + A I GE DVF+VT
Sbjct: 829 PSVTISNEIAEQATVIEASGRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVT 888
Query: 84 DQNGNKLSEDDVSERIQQSL 103
++ KL ++ +SE ++ L
Sbjct: 889 HKD-EKLVDEAISESVRNGL 907
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 34/202 (16%)
Query: 2 DCWSSSFAVVDEFEKLVL--------RMNPPRVTVDNTSNRKATLIKVDSANKRGSLLEL 53
D + ++F+ D F R V VD R AT + + S ++ ++
Sbjct: 690 DAYWTAFSEEDRFRHAAFVRHARDAGRQTSAAVRVDR--RRAATEVMIWSPDRERVFADI 747
Query: 54 VQVLNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLG-------- 104
V ++ + A I ++ D+F++ D G + D +R Q +G
Sbjct: 748 VAAFAEVGADVVGATINTTTSRQVFDIFYIQDAAGQPYGKHDAVQR-QALVGYLREVATG 806
Query: 105 ---PRARSFRSLRR-----------SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLK 150
R R L+R ++ + A + T IE +GRDRPGLL+++ VL+D
Sbjct: 807 EVTVRRRPAAPLKRRDAAFRVTPSVTISNEIAEQATVIEASGRDRPGLLADLADVLADEG 866
Query: 151 CNVMGAEVWTHNSRMASVVYIT 172
+ A++ + R V Y+T
Sbjct: 867 LALTSAQIDGYGERATDVFYVT 888
>gi|224100951|ref|XP_002312081.1| predicted protein [Populus trichocarpa]
gi|222851901|gb|EEE89448.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 150/380 (39%), Gaps = 58/380 (15%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ-NGNKLSEDDV 95
T++ V+ +K G +L +++ + L I RA +DG+W VF V + N +L D +
Sbjct: 21 TVVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVFWVVQRSNSLRLDWDSL 80
Query: 96 SERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R+ P + G AA ++ DR GLL ++ VL++L+ +
Sbjct: 81 KNRLLIVSPPCLAPLYYDHKLNGSTAAPSVYLLKFCCVDRKGLLHDITEVLTELEFTIQR 140
Query: 156 AEVWT-HNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKR---------- 204
+V T + ++ + +IT R LL+ K RD
Sbjct: 141 LKVMTTPDEKVVDLFFITD----------------GRELLHT-KERRDNTCGYLCDVFKE 183
Query: 205 ---SANTAVSVDSTHKERRLHQ--MMYADRDYDMNYAESGSASGR--------SKPLVTV 251
S ++ +R M A+ + +E S + K +VTV
Sbjct: 184 YCISCELQLAGPECENQRTFSSLPMAVAEELFSCELSEKESCTQALGTATTPPKKAIVTV 243
Query: 252 ESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ--EYYIRHVD 309
++ +T++ ++C D+ L +D + T D+ V + + S + Y + IR D
Sbjct: 244 DNLLSPAHTLLQIQCVDQKGLFYDILRTSKDLNIQVAYGR-FSSSIKGYHNMDLLIRQTD 302
Query: 310 GNPI--------SSEAERQRVINCLEAAIKRRTSE-----GISLELCCEDRAGLLSDVTR 356
G I + ++ +++ L I R + +ELC + R + DVT
Sbjct: 303 GKKIVDPELLANTCSRLKEEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVFYDVTL 362
Query: 357 IFRENGLSVTRAEVTTRGSQ 376
++ G+ + AE+ +Q
Sbjct: 363 TLKKLGICIFSAEIGRHSTQ 382
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
C D++GL D+ RI E GL +TRA+ T G VF+VV S +
Sbjct: 27 CPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVFWVVQRSNS 72
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI-RHVDGNPISSEAE 318
TVV + CPD+ L D + + + A + Y +++ + + + ++
Sbjct: 21 TVVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVFWVVQRSNSLRLDWDSL 80
Query: 319 RQRVI----NCLEAAIKRRTSEGIS-------LELCCEDRAGLLSDVTRIFRENGLSVTR 367
+ R++ CL G + L+ CC DR GLL D+T + E ++ R
Sbjct: 81 KNRLLIVSPPCLAPLYYDHKLNGSTAAPSVYLLKFCCVDRKGLLHDITEVLTELEFTIQR 140
Query: 368 AEV-TTRGSQAVNVFYVVDA 386
+V TT + V++F++ D
Sbjct: 141 LKVMTTPDEKVVDLFFITDG 160
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 23 PPR---VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD--GEWFM 77
PP+ VTVDN + TL+++ +++G ++++ DL++ + SS G M
Sbjct: 235 PPKKAIVTVDNLLSPAHTLLQIQCVDQKGLFYDILRTSKDLNIQVAYGRFSSSIKGYHNM 294
Query: 78 DVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAA----LEHTTIELTGR 133
D+ + +G K+ + ++ L + LR + + L +EL G+
Sbjct: 295 DLL-IRQTDGKKIVDPELLANTCSRL--KEEMLHPLRVIITNRGPDTELLVANPVELCGK 351
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSR 164
RP + +V L L + AE+ H+++
Sbjct: 352 GRPRVFYDVTLTLKKLGICIFSAEIGRHSTQ 382
>gi|410943919|ref|ZP_11375660.1| PII uridylyl-transferase [Gluconobacter frateurii NBRC 101659]
Length = 948
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 92/231 (39%), Gaps = 40/231 (17%)
Query: 228 DRDYDMNYAESGSASGRSKPLVTVES--CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQY 285
D D M +A S R + VTVE+ D+G T + + C D P L L
Sbjct: 717 DTDTHMRHARMIHDSDRYRSPVTVEAYPIPDRGVTELTVLCADHPGLFSQIAGALAVAGA 776
Query: 286 VVYHATVIAESPE-AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRT--SEGIS--- 339
+ A + S A ++++ DG + R+ + +E A+ R +GI+
Sbjct: 777 SIVDARIHTLSDGMALDTFWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGIAEAR 836
Query: 340 -----------------------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
+E+ DR GLL D+TR + L ++ A +
Sbjct: 837 HRGASRRMRAIHVPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHI 896
Query: 371 TTRGSQAVNVFYVVDASGNPVKSET-IESVRKEI--GLTILRVKDDAYSKS 418
TT G +AV+VFYV D G + + +R + LT L VK A + +
Sbjct: 897 TTYGMRAVDVFYVRDLLGMKITDPARLAHIRDSLLSSLTPLPVKKSAAAPT 947
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 87/210 (41%), Gaps = 27/210 (12%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLN--DLDLIIRRAYISSDGEWFMDV 79
+P V +R T + V A+ G ++ L ++ R + SDG +D
Sbjct: 736 SPVTVEAYPIPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDG-MALDT 794
Query: 80 FHVTDQNG------------NKLSEDDVSERIQQSLG-PRARSFRSLRRSVGVQ------ 120
F V D +G N L E +S R+ G AR + RR +
Sbjct: 795 FWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGIAEARHRGASRRMRAIHVPPRVV 854
Query: 121 ----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEAT 176
A+ HT IE+ GRDRPGLL ++ LS + A + T+ R V Y+ +
Sbjct: 855 MDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYV-RDLL 913
Query: 177 GLPIDDPDTLAKIKRLLLYVLKGDRDKRSA 206
G+ I DP LA I+ LL L K+SA
Sbjct: 914 GMKITDPARLAHIRDSLLSSLTPLPVKKSA 943
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 23/198 (11%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S++ L+ +++ A + T + MA + +A G +DP L ++ L+
Sbjct: 759 DHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCSFEDPHQLGRLNHLV 818
Query: 194 LYVLKGDRD-KRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVE 252
L G D ++ A ++ + R +H P V ++
Sbjct: 819 EQALSGRLDLEKGIAEARHRGASRRMRAIH----------------------VPPRVVMD 856
Query: 253 SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP 312
+ +TV+ + DRP LL D TL+ + A + A +Y+R + G
Sbjct: 857 NTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRDLLGMK 916
Query: 313 ISSEAERQRVINCLEAAI 330
I+ A + + L +++
Sbjct: 917 ITDPARLAHIRDSLLSSL 934
>gi|424898000|ref|ZP_18321574.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182227|gb|EJC82266.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 968
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + H+++ ++
Sbjct: 807 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARHRKKNKAFVI---------------- 847
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 848 ----PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRS- 112
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR +
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARHRKKN 842
Query: 113 ----LRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
>gi|429064588|ref|ZP_19128488.1| protein-P-II uridylyltransferase [Escherichia coli 99.0672]
gi|427337371|gb|EKW98289.1| protein-P-II uridylyltransferase [Escherichia coli 99.0672]
Length = 890
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEIGLTI 407
+E + V + + T+
Sbjct: 870 NELQQEVHQRLTETL 884
>gi|405377530|ref|ZP_11031471.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
gi|397325967|gb|EJJ30291.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
Length = 963
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRS- 112
+ +SDG +D HV+ + N ++ ED +S +R+ + RA++ +
Sbjct: 784 FTTSDGR-ALDTIHVSREFPNDEDELRRAGTIGRMIEDVLSGRKRLPDVIATRAKNRKKS 842
Query: 113 ----LRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFIIPPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 41/90 (45%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V + + +TV+ + C DRP LL + L+D+ + A + + +Y+
Sbjct: 849 PSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ G IS +++R + ++A + E
Sbjct: 909 DLVGQKISGDSKRANITARMKAVMAEEQDE 938
>gi|344339494|ref|ZP_08770423.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
gi|343800798|gb|EGV18743.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
Length = 886
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 32/189 (16%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYI 305
PLV + T +G T + + DR L L + + A ++ E A Y +
Sbjct: 688 PLVVIRPVTARGGTEIFIYTTDRANLFGRITALLDQVGLNIMDARILTTEGGMAVNTYQV 747
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS-------------------------- 339
DG+PI + + +CL A + E I
Sbjct: 748 LDQDGSPIHDTLRMEEIRSCLVADLAEDAGEEIQVARSMPRRHRYFPTETRVTFSTDEPN 807
Query: 340 ----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+ L DR GLL++V +F+E G+ + A++ T G++ +VF++ + P+ ET
Sbjct: 808 RRTIMRLATLDRPGLLAEVGAVFQECGIRLQNAKIATVGAEVDDVFFITNDDETPITCET 867
Query: 396 -IESVRKEI 403
+ +R+EI
Sbjct: 868 ALSCLRREI 876
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 3 CWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
W + + E E+L P V + + R T I + + ++ + +L+ + L
Sbjct: 673 AWQTRQILACEPEQL------PLVVIRPVTARGGTEIFIYTTDRANLFGRITALLDQVGL 726
Query: 63 IIRRAYI-SSDGEWFMDVFHVTDQNGNKLSE----------------DDVSERIQ--QSL 103
I A I +++G ++ + V DQ+G+ + + +D E IQ +S+
Sbjct: 727 NIMDARILTTEGGMAVNTYQVLDQDGSPIHDTLRMEEIRSCLVADLAEDAGEEIQVARSM 786
Query: 104 GPRARSFRS-LRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
R R F + R + T + L DRPGLL+EV AV + + A++ T
Sbjct: 787 PRRHRYFPTETRVTFSTDEPNRRTIMRLATLDRPGLLAEVGAVFQECGIRLQNAKIATVG 846
Query: 163 SRMASVVYITSE 174
+ + V +IT++
Sbjct: 847 AEVDDVFFITND 858
>gi|206579824|ref|YP_002240345.1| PII uridylyl-transferase [Klebsiella pneumoniae 342]
gi|206568882|gb|ACI10658.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae 342]
Length = 887
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I + LE I +R+ E +
Sbjct: 749 FIVLEPDGSPLS--ADRHDAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVPTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGLN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R + PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHDAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGL 865
>gi|424512908|emb|CCO66492.1| predicted protein [Bathycoccus prasinos]
Length = 250
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 48/221 (21%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+V +DN S+ AT+++++ +K G L + + + +L L I RA I+ E + F+VT
Sbjct: 35 PKVIIDNLSDPLATILEIEFGDKLGELADTCEAIRNLGLDISRAEIT---ESNQNRFYVT 91
Query: 84 D-QNGNKLSEDDVSERIQQSL-------GPRARSF--RSLRRS----VGVQAALEHTT-- 127
D Q+ K++ E ++Q++ P A+ F ++ R S V A E+ T
Sbjct: 92 DHQSSEKITASARLEDLRQTVLTTMCYYHPEAQEFVQQTARNSKPYEVADDAETEYVTPT 151
Query: 128 -------------------------IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
IE T DRPGLLSE+ VL DL NV+ AE+ T
Sbjct: 152 KKKRQIVPTRITVTSVSNGTKSKLLIETT--DRPGLLSEIVRVLKDLNLNVVQAEIDTIG 209
Query: 163 SRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDK 203
+ + T L D+ + L + L Y+ + DRD+
Sbjct: 210 AAAVDTMLCTYHGKALN-DNMEQLV-VNTLQYYLGRLDRDE 248
>gi|421588176|ref|ZP_16033492.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
gi|403707146|gb|EJZ22223.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
Length = 899
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 779 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 838
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 839 TDLVGQKISGD 849
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 795 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 850
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T IE+ DRPGLLSE+ AVLSDL ++ A + T ++ Y+T
Sbjct: 793 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 839
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E P DD D
Sbjct: 682 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSRE---FP-DDSD 737
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G +RL +++ A R + S
Sbjct: 738 ELRRAATIGRMIEDVLSG------------------RKRLPEVI-ATRTRN----RKKSK 774
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 775 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 834
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + L+A + E
Sbjct: 835 TFYVTDLVGQKISGDSKRANITARLKAVMAEEEDE 869
>gi|424879748|ref|ZP_18303380.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516111|gb|EIW40843.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 968
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRSL 113
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ +
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRKKS 842
Query: 114 RR-----SVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + ++++ S
Sbjct: 807 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARNRKK--------------------SK 843
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 844 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|398349930|ref|YP_006395394.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
gi|390125256|gb|AFL48637.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
Length = 971
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ NT + K T+I+V+ ++ G L E+ VL+DL L I A+I++ GE +D F+VT
Sbjct: 853 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++ ++ I L
Sbjct: 913 DLVGAKITNENRQANIAARL 932
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DR GLLSEV AVLSDL ++ A + T ++ Y+T + G I + +
Sbjct: 866 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT-DLVGAKITNENR 924
Query: 186 LAKIKRLLLYVLKGDRDK 203
A I L VL G+ D+
Sbjct: 925 QANIAARLKAVLAGEVDE 942
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
DR GLLS+VT + + L + A +TT G + ++ FYV D G + +E
Sbjct: 874 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKITNE 922
>gi|227820619|ref|YP_002824589.1| PII uridylyl-transferase [Sinorhizobium fredii NGR234]
gi|227339618|gb|ACP23836.1| [Protein-PII] uridylyltransferase [Sinorhizobium fredii NGR234]
Length = 965
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ NT + K T+I+V+ ++ G L E+ VL+DL L I A+I++ GE +D F+VT
Sbjct: 847 PEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVT 906
Query: 84 DQNGNKLSEDD 94
D G K++ ++
Sbjct: 907 DLVGAKITNEN 917
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DR GLLSE+ AVLSDL ++ A + T ++ Y+T + G I + +
Sbjct: 860 TVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVT-DLVGAKITNENR 918
Query: 186 LAKIKRLLLYVLKGDRDK 203
I L VL G+ D+
Sbjct: 919 QGNIAARLKAVLAGEVDE 936
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
DR GLLS++T + + L + A +TT G + ++ FYV D G + +E
Sbjct: 868 DRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKITNE 916
>gi|86356044|ref|YP_467936.1| PII uridylyl-transferase [Rhizobium etli CFN 42]
gi|86280146|gb|ABC89209.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CFN 42]
Length = 944
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 884 TDLVGQKISGD 894
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 840 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 895
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T IE+ DRPGLLSE+ AVLSDL ++ A + T ++ Y+T
Sbjct: 838 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 91/215 (42%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E DD D
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFA----DDAD 782
Query: 185 TLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L + I R++ VL G ++ ++ + ++++ + +D+
Sbjct: 783 ELRRAGTIGRMIENVLAG---RKRLPEVIATRTRNRKK--------SKAFDI-------- 823
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 824 ----PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 879
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 880 TFYVTDLVGQKISGDSKRANITARMKAVMAEEQDE 914
>gi|116250174|ref|YP_766012.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|6572661|gb|AAF17352.1|AF155830_1 putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
leguminosarum bv. viciae]
gi|115254822|emb|CAK05896.1| putative [Protein-PII] uridylyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 968
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRS- 112
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ +
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRKKS 842
Query: 113 ----LRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + ++++ S
Sbjct: 807 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARNRKK--------------------SK 843
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 844 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|424873391|ref|ZP_18297053.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169092|gb|EJC69139.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 968
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRSL 113
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ +
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRKKS 842
Query: 114 RR-----SVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + ++++ S
Sbjct: 807 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARNRKK--------------------SK 843
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 844 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + + A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMRAVMAEEEDE 938
>gi|110636357|ref|YP_676565.1| PII uridylyl-transferase [Chelativorans sp. BNC1]
gi|110287341|gb|ABG65400.1| UTP-GlnB uridylyltransferase, GlnD [Chelativorans sp. BNC1]
Length = 912
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 12/131 (9%)
Query: 85 QNGNKLSEDDVS------ERIQQSLGPR--ARSFRSLRRSVGVQAALEH--TTIELTGRD 134
Q +L ED +S E I++ PR ++FR R+ V+ AL + + IE+ D
Sbjct: 774 QRVGRLIEDVLSGTAYLPEVIEKRTKPRRGTKAFRIEPRA-DVRNALSNRFSVIEIECLD 832
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLL 194
RPGLLSEV +VLSDL ++ A + T ++ Y+T + TG +D+PD L I+R L+
Sbjct: 833 RPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT-DLTGSKVDNPDRLEVIRRELI 891
Query: 195 YVLKGDRDKRS 205
++ +R+
Sbjct: 892 ETIENGPPRRN 902
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PR V N + + ++I+++ ++ G L E+ VL+DL L I A+I++ GE +D F+VT
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT 870
Query: 84 DQNGNKLSEDDVSERIQQSL------GPRARSFRSLRRSVG 118
D G+K+ D E I++ L GP R+ R+ ++V
Sbjct: 871 DLTGSKVDNPDRLEVIRRELIETIENGPPRRNNRAKAKTVA 911
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS-ETIES 398
+E+ C DR GLLS+VT + + L + A +TT G + ++ FYV D +G+ V + + +E
Sbjct: 826 IEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTDLTGSKVDNPDRLEV 885
Query: 399 VRKEIGLTILRVKDDAYSKSPPQESGR 425
+R+E+ TI PP+ + R
Sbjct: 886 IRRELIETI--------ENGPPRRNNR 904
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 100/254 (39%), Gaps = 29/254 (11%)
Query: 88 NKLSEDDVSERIQQSLGPRA--RSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAV 145
N L D +++I+ + RA R ++L V A T I + D P LLS +
Sbjct: 673 NYLLAVDENDQIRHAEFIRAADREGKALSTMVKPHAFEAVTEITVLAPDHPRLLSVIAGA 732
Query: 146 LSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRS 205
+ N++ A+++T A + + D+ ++ RL+ VL G +
Sbjct: 733 CAAANANIVDAQIFTTTDGRALDTILIGREFEMDEDELRRAQRVGRLIEDVLSG-----T 787
Query: 206 ANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLR 265
A ++ K RR G+ + R +P V + ++V+ +
Sbjct: 788 AYLPEVIEKRTKPRR------------------GTKAFRIEPRADVRNALSNRFSVIEIE 829
Query: 266 CPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDG----NPISSEAERQR 321
C DRP LL + L+D+ + A + + +Y+ + G NP E R+
Sbjct: 830 CLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTDLTGSKVDNPDRLEVIRRE 889
Query: 322 VINCLEAAIKRRTS 335
+I +E RR +
Sbjct: 890 LIETIENGPPRRNN 903
>gi|241202799|ref|YP_002973895.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856689|gb|ACS54356.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 968
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRSL 113
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ +
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRKKS 842
Query: 114 RR-----SVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + ++++ S
Sbjct: 807 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARNRKK--------------------SK 843
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 844 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|402490590|ref|ZP_10837379.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
gi|401810616|gb|EJT02989.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
Length = 968
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + H+++ ++
Sbjct: 807 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARHRKKNKAFVI---------------- 847
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 848 ----PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRS- 112
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR +
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARHRKKN 842
Query: 113 ----LRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
>gi|414875535|tpg|DAA52666.1| TPA: hypothetical protein ZEAMMB73_008664 [Zea mays]
Length = 270
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+R AT++++ ++ G+LL+ ++ L DL L + + +++D FH+
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 84 DQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALE--------HTTI 128
+ G K+ + D+ ERI+ ++ P + ++ G++ + H +
Sbjct: 126 -RFGRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 129 ELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
E G DRPGLL E+ +++D +V AE+ T
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDT 226
>gi|288937051|ref|YP_003441110.1| UTP-GlnB uridylyltransferase, GlnD [Klebsiella variicola At-22]
gi|290512472|ref|ZP_06551838.1| protein-P-II uridylyltransferase [Klebsiella sp. 1_1_55]
gi|288891760|gb|ADC60078.1| UTP-GlnB uridylyltransferase, GlnD [Klebsiella variicola At-22]
gi|289774813|gb|EFD82815.1| protein-P-II uridylyltransferase [Klebsiella sp. 1_1_55]
Length = 887
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I + LE I +R+ E +
Sbjct: 749 FIVLEPDGSPLS--ADRHDAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVPTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGLN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R + PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHDAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGL 865
>gi|114327079|ref|YP_744236.1| PII uridylyl-transferase [Granulibacter bethesdensis CGDNIH1]
gi|114315253|gb|ABI61313.1| [protein-PII] uridylyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 963
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 77 MDVFHVTDQNG------NKLS------------EDDVSERIQQS----LGPRARSFR-SL 113
MD F V D +G N+L+ + D+ E I+++ LG R R+
Sbjct: 796 MDTFWVQDTSGEAFDQPNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRMRAIHVPP 855
Query: 114 RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
R V A+ HT +E+ GRDRPGL+ ++ A ++ + A + T+ R V Y+
Sbjct: 856 RVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYV-K 914
Query: 174 EATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTH 216
+ GL +++ LAK+++ LL L D + TH
Sbjct: 915 DVFGLKVENERKLAKLRQALLGALTSPDDTGPMPLPPPMRRTH 957
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
LE+ DR GL+ D+ + GL + A +TT G +AV+VFYV D G V++E +
Sbjct: 870 LEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKDVFGLKVENERKLAK 929
Query: 400 RKEIGLTILRVKDD 413
++ L L DD
Sbjct: 930 LRQALLGALTSPDD 943
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 80/202 (39%), Gaps = 31/202 (15%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL+ ++ L+ +++ A + T + MA + + +G D P+ LAKI L+
Sbjct: 763 DTPGLVGKIAGALAVAGASIVDARIHTMTNGMAMDTFWVQDTSGEAFDQPNRLAKIAVLI 822
Query: 194 LYVLKGDRD-----KRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
L G D ++++N + + R +H P
Sbjct: 823 EQALSGQLDIDEEIRKASNPLLGT----RMRAIH----------------------VPPR 856
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V V++ +TV+ + DRP L+ D + + A + A +Y++ V
Sbjct: 857 VVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKDV 916
Query: 309 DGNPISSEAERQRVINCLEAAI 330
G + +E + ++ L A+
Sbjct: 917 FGLKVENERKLAKLRQALLGAL 938
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 47/81 (58%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDN ++ T+++V+ ++ G + ++ + L I A+I++ G +DVF+V
Sbjct: 854 PPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYV 913
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ + +++Q+L
Sbjct: 914 KDVFGLKVENERKLAKLRQAL 934
>gi|424888942|ref|ZP_18312545.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174491|gb|EJC74535.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 968
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRS- 112
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ R
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRRKN 842
Query: 113 ----LRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G KR + + + RR ++
Sbjct: 807 ELRRAATIGRMIEDVLSGR--KRLPEV---IATRARNRRKNKAFVI-------------- 847
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 848 ----PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|432452920|ref|ZP_19695167.1| [protein-PII] uridylyltransferase [Escherichia coli KTE193]
gi|433031572|ref|ZP_20219397.1| [protein-PII] uridylyltransferase [Escherichia coli KTE112]
gi|430975514|gb|ELC92409.1| [protein-PII] uridylyltransferase [Escherichia coli KTE193]
gi|431561507|gb|ELI34876.1| [protein-PII] uridylyltransferase [Escherichia coli KTE112]
Length = 890
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 870 NELQQEVQQRL 880
>gi|333901617|ref|YP_004475490.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
gi|333116882|gb|AEF23396.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
Length = 897
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Query: 12 DEFEKLVLRMNP---------PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
DE+ ++ R P P+VT+ N + R T++++ + ++ G L ++ ++ D DL
Sbjct: 781 DEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDL 840
Query: 63 IIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
++ A I++ GE DVF VTD + LS+ ++ R+QQ++
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDADNQPLSDPELCARLQQTI 881
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 39/212 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A ++ + + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCL------EAAIKRRTSEGIS------------ 339
YI + NP + RQ +I+ L + I+RR +
Sbjct: 749 YIVLEAEGGSIGDNPKRIQQIRQSLIDTLMHPDEYPSIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+EL DR GLL+ + RIF + LSV A++ T G + +VF+V DA P+
Sbjct: 809 DAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Query: 392 KSETIESVRKEIGLTILRVKDDAYSKSPPQES 423
+ + ++ +T L A S SP Q S
Sbjct: 869 SDPELCARLQQTIVTQL----SASSPSPAQIS 896
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T I + + ++ V + L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQS--------LGP-------RARSFRSLRRSVGVQAALE 124
+ V + G + D +RIQQ + P + R R L+
Sbjct: 749 YIVLEAEGGSIG--DNPKRIQQIRQSLIDTLMHPDEYPSIIQRRVPRQLKHFAFAPQVTI 806
Query: 125 H-------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
H T +ELT DRPGLL+++ + D +V A++ T R+ V ++T +A
Sbjct: 807 HNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVT-DADN 865
Query: 178 LPIDDPDTLAKIKRLLL 194
P+ DP+ A++++ ++
Sbjct: 866 QPLSDPELCARLQQTIV 882
>gi|424915802|ref|ZP_18339166.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851978|gb|EJB04499.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 968
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRSL 113
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ +
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRKKS 842
Query: 114 RR-----SVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + ++++ S
Sbjct: 807 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARNRKK--------------------SK 843
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 844 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|209547642|ref|YP_002279559.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533398|gb|ACI53333.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 968
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRSL 113
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ +
Sbjct: 784 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRKKS 842
Query: 114 RR-----SVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 806
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + ++++ S
Sbjct: 807 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARNRKK--------------------SK 843
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 844 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|12229842|sp|Q9RAE4.2|GLND_RHILV RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 944
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 884 TDLVGQKISGD 894
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 840 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 895
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRSL 113
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ +
Sbjct: 760 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRKKS 818
Query: 114 RR-----SVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 819 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 878
Query: 167 SVVYIT 172
Y+T
Sbjct: 879 DTFYVT 884
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 782
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + ++++ S
Sbjct: 783 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARNRKK--------------------SK 819
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 820 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 879
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 880 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 914
>gi|417110224|ref|ZP_11963559.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
gi|327188578|gb|EGE55788.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
Length = 968
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRS- 112
+ +SDG +D HV+ + + ++ ED +S +R+ + + R R+ +
Sbjct: 784 FTTSDGR-ALDTIHVSREFADDADELRRAGTIGRMIEDVLSGRKRLPEVIATRTRNRKKS 842
Query: 113 ----LRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 167 SVVYIT 172
Y+T
Sbjct: 903 DTFYVT 908
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFA----DDAD 806
Query: 185 TLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L + I R++ VL G +RL +++ A R + S
Sbjct: 807 ELRRAGTIGRMIEDVLSG------------------RKRLPEVI-ATRTRN----RKKSK 843
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 844 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|218698586|ref|YP_002406215.1| PII uridylyl-transferase [Escherichia coli IAI39]
gi|226723941|sp|B7NIC8.1|GLND_ECO7I RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218368572|emb|CAR16309.1| uridylyltransferase [Escherichia coli IAI39]
Length = 890
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIQFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|319779935|ref|YP_004139411.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165823|gb|ADV09361.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 933
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
+ IE+ G DRPGLLSE+ LSDL ++ A + T ++ Y+T + TG ID+P
Sbjct: 847 SVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT-DLTGQKIDNPAR 905
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVD 213
+A I+ L+ L+G +R + + +
Sbjct: 906 IATIRNRLMATLEGIVPERGGKSRAAAE 933
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPR + NT + + ++I+V+ ++ G L E+ L+DL L I A+I++ GE +D F+V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 83 TDQNGNKL 90
TD G K+
Sbjct: 893 TDLTGQKI 900
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLLS++T + L + A +TT G + ++ FYV D +G NP + T
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIAT 908
Query: 396 I 396
I
Sbjct: 909 I 909
>gi|190890057|ref|YP_001976599.1| PII uridylyl-transferase [Rhizobium etli CIAT 652]
gi|190695336|gb|ACE89421.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CIAT 652]
Length = 968
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 908 TDLVGQKISGD 918
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 919
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T IE+ DRPGLLSE+ AVLSDL ++ A + T ++ Y+T
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E DD D
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFA----DDAD 806
Query: 185 TLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L + I R++ VL G +RL +++ A R + S
Sbjct: 807 ELRRAGTIGRMIEDVLSG------------------RKRLPEVI-ATRTRN----RKKSK 843
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 844 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 903
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 904 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|289626037|ref|ZP_06458991.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651446|ref|ZP_06482789.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422582741|ref|ZP_16657874.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298157152|gb|EFH98240.1| [Protein-PII] uridylyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867581|gb|EGH02290.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 898
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I ER Q + N L A IKRR +
Sbjct: 748 YIVLDNEGGSIGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCSQLQDAI 880
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + D ER+Q+ + R+ ++R V Q L+H
Sbjct: 748 YIVLDNEGGSIG--DNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 863 NNHPLSDPQLCSQLQ 877
>gi|13474440|ref|NP_106008.1| PII uridylyl-transferase [Mesorhizobium loti MAFF303099]
gi|22256765|sp|Q98C27.1|GLND_RHILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|14025193|dbj|BAB51794.1| uridylyltransferase [Mesorhizobium loti MAFF303099]
Length = 933
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
+ IE+ G DRPGLLSE+ LSDL ++ A + T ++ Y+T + TG ID P
Sbjct: 847 SVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT-DLTGQKIDSPAR 905
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVD 213
+A I+ L+ L+G +R + +
Sbjct: 906 IATIRNRLMATLEGIAPERGGKAKAAAE 933
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPR + NT + + ++I+V+ ++ G L E+ L+DL L I A+I++ GE +D F+V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 83 TDQNGNKL 90
TD G K+
Sbjct: 893 TDLTGQKI 900
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IESVRKEIG 404
DR GLLS++T + L + A +TT G + ++ FYV D +G + S I ++R +
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRLM 914
Query: 405 LTI 407
T+
Sbjct: 915 ATL 917
>gi|71735709|ref|YP_275980.1| PII uridylyl-transferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|416025723|ref|ZP_11569371.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|91206748|sp|Q48F57.1|GLND_PSE14 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|71556262|gb|AAZ35473.1| protein-P-II uridylyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320329606|gb|EFW85595.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 898
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I ER Q + N L A IKRR +
Sbjct: 748 YIVLDNEGGSIGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCSQLQDAI 880
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + D ER+Q+ + R+ ++R V Q L+H
Sbjct: 748 YIVLDNEGGSIG--DNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 863 NNHPLSDPQLCSQLQ 877
>gi|84515914|ref|ZP_01003275.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
gi|84510356|gb|EAQ06812.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
Length = 930
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 24/206 (11%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S + L+ + N++ A +T A+ V+ + G P ++ L ++++++
Sbjct: 749 DHPGLFSRMTGALALVGANIVDARTYTSKDGYATAVFWVQDGDGNPYEE-SRLQRLRQMI 807
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
+ L+G+ R A D K R ++ D + + GS
Sbjct: 808 VRTLRGEVVAREALK--DKDKIKKRERAFRV-----DTKITFDNDGS------------- 847
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ YT++ + DRP LL+D TL + + A + + +Y++ + G
Sbjct: 848 ---EIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKDMVGLKY 904
Query: 314 SSEAERQRVINCLEAAIKRRTSEGIS 339
SEA+RQ + L AI + IS
Sbjct: 905 YSEAKRQSLERKLREAIAQGAQRAIS 930
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
++T DN + T+I+VD+ ++ G L +L + L + + I A I++ GE +D F+V D
Sbjct: 839 KITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKD 898
Query: 85 QNGNKLSEDDVSERIQQSLGPRARSFRSLRRSV--GVQAAL 123
G K SE +QSL R LR ++ G Q A+
Sbjct: 899 MVGLKY----YSEAKRQSLE------RKLREAIAQGAQRAI 929
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLL D+TR + + A + T G Q V+ FYV D G SE
Sbjct: 853 IEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKDMVGLKYYSEA 908
>gi|222154992|ref|YP_002555131.1| [Protein-PII] uridylyltransferase [Escherichia coli LF82]
gi|306815233|ref|ZP_07449382.1| PII uridylyl-transferase [Escherichia coli NC101]
gi|387615514|ref|YP_006118536.1| PII uridylyl-transferase [Escherichia coli O83:H1 str. NRG 857C]
gi|419699096|ref|ZP_14226719.1| PII uridylyl-transferase [Escherichia coli SCI-07]
gi|422380522|ref|ZP_16460700.1| protein-P-II uridylyltransferase [Escherichia coli MS 57-2]
gi|432384723|ref|ZP_19627636.1| [protein-PII] uridylyltransferase [Escherichia coli KTE15]
gi|432385552|ref|ZP_19628454.1| [protein-PII] uridylyltransferase [Escherichia coli KTE16]
gi|432430327|ref|ZP_19672777.1| [protein-PII] uridylyltransferase [Escherichia coli KTE187]
gi|432512364|ref|ZP_19749611.1| [protein-PII] uridylyltransferase [Escherichia coli KTE224]
gi|432609872|ref|ZP_19846048.1| [protein-PII] uridylyltransferase [Escherichia coli KTE72]
gi|432644575|ref|ZP_19880382.1| [protein-PII] uridylyltransferase [Escherichia coli KTE86]
gi|432654209|ref|ZP_19889931.1| [protein-PII] uridylyltransferase [Escherichia coli KTE93]
gi|432697473|ref|ZP_19932649.1| [protein-PII] uridylyltransferase [Escherichia coli KTE169]
gi|432744092|ref|ZP_19978801.1| [protein-PII] uridylyltransferase [Escherichia coli KTE43]
gi|432842428|ref|ZP_20075856.1| [protein-PII] uridylyltransferase [Escherichia coli KTE141]
gi|432902467|ref|ZP_20112215.1| [protein-PII] uridylyltransferase [Escherichia coli KTE194]
gi|432941861|ref|ZP_20139359.1| [protein-PII] uridylyltransferase [Escherichia coli KTE183]
gi|432970303|ref|ZP_20159185.1| [protein-PII] uridylyltransferase [Escherichia coli KTE207]
gi|432983889|ref|ZP_20172631.1| [protein-PII] uridylyltransferase [Escherichia coli KTE215]
gi|433037092|ref|ZP_20224720.1| [protein-PII] uridylyltransferase [Escherichia coli KTE113]
gi|433081071|ref|ZP_20267551.1| [protein-PII] uridylyltransferase [Escherichia coli KTE133]
gi|433099705|ref|ZP_20285826.1| [protein-PII] uridylyltransferase [Escherichia coli KTE145]
gi|433142665|ref|ZP_20327851.1| [protein-PII] uridylyltransferase [Escherichia coli KTE168]
gi|433191488|ref|ZP_20375555.1| [protein-PII] uridylyltransferase [Escherichia coli KTE88]
gi|433196736|ref|ZP_20380674.1| [protein-PII] uridylyltransferase [Escherichia coli KTE94]
gi|433206337|ref|ZP_20390046.1| [protein-PII] uridylyltransferase [Escherichia coli KTE97]
gi|222031997|emb|CAP74736.1| [Protein-PII] uridylyltransferase [Escherichia coli LF82]
gi|305850895|gb|EFM51350.1| PII uridylyl-transferase [Escherichia coli NC101]
gi|312944775|gb|ADR25602.1| PII uridylyl-transferase [Escherichia coli O83:H1 str. NRG 857C]
gi|324008262|gb|EGB77481.1| protein-P-II uridylyltransferase [Escherichia coli MS 57-2]
gi|380349738|gb|EIA38003.1| PII uridylyl-transferase [Escherichia coli SCI-07]
gi|430901946|gb|ELC23842.1| [protein-PII] uridylyltransferase [Escherichia coli KTE15]
gi|430911080|gb|ELC32378.1| [protein-PII] uridylyltransferase [Escherichia coli KTE16]
gi|430957633|gb|ELC76285.1| [protein-PII] uridylyltransferase [Escherichia coli KTE187]
gi|431045494|gb|ELD55727.1| [protein-PII] uridylyltransferase [Escherichia coli KTE224]
gi|431152503|gb|ELE53454.1| [protein-PII] uridylyltransferase [Escherichia coli KTE72]
gi|431185579|gb|ELE85308.1| [protein-PII] uridylyltransferase [Escherichia coli KTE86]
gi|431196257|gb|ELE95202.1| [protein-PII] uridylyltransferase [Escherichia coli KTE93]
gi|431247662|gb|ELF41883.1| [protein-PII] uridylyltransferase [Escherichia coli KTE169]
gi|431296465|gb|ELF86177.1| [protein-PII] uridylyltransferase [Escherichia coli KTE43]
gi|431398196|gb|ELG81619.1| [protein-PII] uridylyltransferase [Escherichia coli KTE141]
gi|431438596|gb|ELH19970.1| [protein-PII] uridylyltransferase [Escherichia coli KTE194]
gi|431456462|gb|ELH36806.1| [protein-PII] uridylyltransferase [Escherichia coli KTE183]
gi|431487745|gb|ELH67389.1| [protein-PII] uridylyltransferase [Escherichia coli KTE207]
gi|431507955|gb|ELH86237.1| [protein-PII] uridylyltransferase [Escherichia coli KTE215]
gi|431557200|gb|ELI30974.1| [protein-PII] uridylyltransferase [Escherichia coli KTE113]
gi|431607323|gb|ELI76693.1| [protein-PII] uridylyltransferase [Escherichia coli KTE133]
gi|431624028|gb|ELI92652.1| [protein-PII] uridylyltransferase [Escherichia coli KTE145]
gi|431668045|gb|ELJ34621.1| [protein-PII] uridylyltransferase [Escherichia coli KTE168]
gi|431699557|gb|ELJ64562.1| [protein-PII] uridylyltransferase [Escherichia coli KTE88]
gi|431726634|gb|ELJ90442.1| [protein-PII] uridylyltransferase [Escherichia coli KTE94]
gi|431733936|gb|ELJ97339.1| [protein-PII] uridylyltransferase [Escherichia coli KTE97]
Length = 890
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|432677762|ref|ZP_19913192.1| [protein-PII] uridylyltransferase [Escherichia coli KTE142]
gi|431207944|gb|ELF06174.1| [protein-PII] uridylyltransferase [Escherichia coli KTE142]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|422594799|ref|ZP_16669089.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985106|gb|EGH83209.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 898
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I ER Q + N L A IKRR +
Sbjct: 748 YIVLDNEGGSIGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCSQLQDAI 880
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + D ER+Q+ + R+ ++R V Q L+H
Sbjct: 748 YIVLDNEGGSIG--DNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 863 NNHPLSDPQLCSQLQ 877
>gi|330504246|ref|YP_004381115.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
gi|328918532|gb|AEB59363.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
Length = 898
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I + +
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 303 YYIRHVDG-----NPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG NP + R+ +I L+ I+RR +
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + RIF E LS+ A++ T G + +VF++ D G P+
Sbjct: 809 DAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDDKGQPL 868
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G LS+ + R+Q+++
Sbjct: 862 DDKGQPLSDPEFCARLQEAI 881
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G + + DD IQ+ + PR + V +
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT + G
Sbjct: 808 NDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDD-KGQ 866
Query: 179 PIDDPDTLAKIKRLLL 194
P+ DP+ A+++ ++
Sbjct: 867 PLSDPEFCARLQEAII 882
>gi|416018072|ref|ZP_11565073.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320323122|gb|EFW79211.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 898
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I ER Q + N L A IKRR +
Sbjct: 748 YIVLDNEGGSIGDNPERAQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCSQLQDAI 880
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + D ER Q+ + R+ ++R V Q L+H
Sbjct: 748 YIVLDNEGGSIG--DNPERAQEIRNGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 863 NNHPLSDPQLCSQLQ 877
>gi|291280989|ref|YP_003497807.1| [protein-PII] uridylyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|290760862|gb|ADD54823.1| [Protein-PII] uridylyltransferase [Escherichia coli O55:H7 str.
CB9615]
Length = 831
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 634 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 692
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 693 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 750
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 751 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 810
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 811 NELQQEVHQRL 821
>gi|91209236|ref|YP_539222.1| PII uridylyl-transferase [Escherichia coli UTI89]
gi|117622452|ref|YP_851365.1| PII uridylyl-transferase [Escherichia coli APEC O1]
gi|218557108|ref|YP_002390021.1| PII uridylyl-transferase [Escherichia coli S88]
gi|237704326|ref|ZP_04534807.1| uridylyltransferase [Escherichia sp. 3_2_53FAA]
gi|386597917|ref|YP_006099423.1| protein-P-II uridylyltransferase [Escherichia coli IHE3034]
gi|386607259|ref|YP_006113559.1| PII uridylyl-transferase [Escherichia coli UM146]
gi|417082474|ref|ZP_11950808.1| PII uridylyl-transferase [Escherichia coli cloneA_i1]
gi|419942398|ref|ZP_14459001.1| PII uridylyl-transferase [Escherichia coli HM605]
gi|422360935|ref|ZP_16441563.1| protein-P-II uridylyltransferase [Escherichia coli MS 110-3]
gi|422750443|ref|ZP_16804353.1| protein-P-II uridylyltransferase [Escherichia coli H252]
gi|422756508|ref|ZP_16810331.1| protein-P-II uridylyltransferase [Escherichia coli H263]
gi|422839832|ref|ZP_16887803.1| uridylyltransferase [Escherichia coli H397]
gi|432356526|ref|ZP_19599774.1| [protein-PII] uridylyltransferase [Escherichia coli KTE4]
gi|432366024|ref|ZP_19609159.1| [protein-PII] uridylyltransferase [Escherichia coli KTE5]
gi|432572060|ref|ZP_19808554.1| [protein-PII] uridylyltransferase [Escherichia coli KTE55]
gi|432586496|ref|ZP_19822869.1| [protein-PII] uridylyltransferase [Escherichia coli KTE58]
gi|432596065|ref|ZP_19832355.1| [protein-PII] uridylyltransferase [Escherichia coli KTE62]
gi|432757681|ref|ZP_19992215.1| [protein-PII] uridylyltransferase [Escherichia coli KTE22]
gi|432790750|ref|ZP_20024871.1| [protein-PII] uridylyltransferase [Escherichia coli KTE65]
gi|432819517|ref|ZP_20053232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE118]
gi|433003708|ref|ZP_20192147.1| [protein-PII] uridylyltransferase [Escherichia coli KTE227]
gi|433010915|ref|ZP_20199320.1| [protein-PII] uridylyltransferase [Escherichia coli KTE229]
gi|433152302|ref|ZP_20337276.1| [protein-PII] uridylyltransferase [Escherichia coli KTE176]
gi|433161948|ref|ZP_20346718.1| [protein-PII] uridylyltransferase [Escherichia coli KTE179]
gi|433166883|ref|ZP_20351569.1| [protein-PII] uridylyltransferase [Escherichia coli KTE180]
gi|122424959|sp|Q1RG23.1|GLND_ECOUT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166226149|sp|A1A7L1.1|GLND_ECOK1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|226723940|sp|B7MBE8.1|GLND_ECO45 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91070810|gb|ABE05691.1| [protein-PII] uridylyltransferase [Escherichia coli UTI89]
gi|115511576|gb|ABI99650.1| PII uridylyl-transferase [Escherichia coli APEC O1]
gi|218363877|emb|CAR01541.1| uridylyltransferase [Escherichia coli S88]
gi|226902238|gb|EEH88497.1| uridylyltransferase [Escherichia sp. 3_2_53FAA]
gi|294490561|gb|ADE89317.1| protein-P-II uridylyltransferase [Escherichia coli IHE3034]
gi|307629743|gb|ADN74047.1| PII uridylyl-transferase [Escherichia coli UM146]
gi|315285236|gb|EFU44681.1| protein-P-II uridylyltransferase [Escherichia coli MS 110-3]
gi|323950834|gb|EGB46711.1| protein-P-II uridylyltransferase [Escherichia coli H252]
gi|323955128|gb|EGB50903.1| protein-P-II uridylyltransferase [Escherichia coli H263]
gi|355353444|gb|EHG02611.1| PII uridylyl-transferase [Escherichia coli cloneA_i1]
gi|371608316|gb|EHN96872.1| uridylyltransferase [Escherichia coli H397]
gi|388422960|gb|EIL82509.1| PII uridylyl-transferase [Escherichia coli HM605]
gi|430880117|gb|ELC03438.1| [protein-PII] uridylyltransferase [Escherichia coli KTE4]
gi|430881131|gb|ELC04393.1| [protein-PII] uridylyltransferase [Escherichia coli KTE5]
gi|431111787|gb|ELE15678.1| [protein-PII] uridylyltransferase [Escherichia coli KTE55]
gi|431124397|gb|ELE27043.1| [protein-PII] uridylyltransferase [Escherichia coli KTE58]
gi|431134661|gb|ELE36610.1| [protein-PII] uridylyltransferase [Escherichia coli KTE62]
gi|431297582|gb|ELF87232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE22]
gi|431333762|gb|ELG20947.1| [protein-PII] uridylyltransferase [Escherichia coli KTE65]
gi|431371276|gb|ELG57061.1| [protein-PII] uridylyltransferase [Escherichia coli KTE118]
gi|431518659|gb|ELH96113.1| [protein-PII] uridylyltransferase [Escherichia coli KTE227]
gi|431519127|gb|ELH96579.1| [protein-PII] uridylyltransferase [Escherichia coli KTE229]
gi|431679116|gb|ELJ45032.1| [protein-PII] uridylyltransferase [Escherichia coli KTE176]
gi|431693339|gb|ELJ58755.1| [protein-PII] uridylyltransferase [Escherichia coli KTE179]
gi|431695148|gb|ELJ60484.1| [protein-PII] uridylyltransferase [Escherichia coli KTE180]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|110640386|ref|YP_668114.1| PII uridylyl-transferase [Escherichia coli 536]
gi|191172779|ref|ZP_03034316.1| protein-P-II uridylyltransferase [Escherichia coli F11]
gi|300984846|ref|ZP_07177135.1| protein-P-II uridylyltransferase [Escherichia coli MS 200-1]
gi|386617672|ref|YP_006137252.1| Uridylyltransferase [Escherichia coli NA114]
gi|387828235|ref|YP_003348172.1| uridylyltransferase [Escherichia coli SE15]
gi|417287717|ref|ZP_12075003.1| protein-P-II uridylyltransferase [Escherichia coli TW07793]
gi|419912658|ref|ZP_14431106.1| PII uridylyl-transferase [Escherichia coli KD1]
gi|422376522|ref|ZP_16456773.1| protein-P-II uridylyltransferase [Escherichia coli MS 60-1]
gi|432396021|ref|ZP_19638814.1| [protein-PII] uridylyltransferase [Escherichia coli KTE25]
gi|432405054|ref|ZP_19647778.1| [protein-PII] uridylyltransferase [Escherichia coli KTE28]
gi|432420290|ref|ZP_19662849.1| [protein-PII] uridylyltransferase [Escherichia coli KTE178]
gi|432469088|ref|ZP_19711151.1| [protein-PII] uridylyltransferase [Escherichia coli KTE205]
gi|432469499|ref|ZP_19711555.1| [protein-PII] uridylyltransferase [Escherichia coli KTE206]
gi|432498466|ref|ZP_19740247.1| [protein-PII] uridylyltransferase [Escherichia coli KTE216]
gi|432557197|ref|ZP_19793891.1| [protein-PII] uridylyltransferase [Escherichia coli KTE49]
gi|432581359|ref|ZP_19817777.1| [protein-PII] uridylyltransferase [Escherichia coli KTE57]
gi|432692854|ref|ZP_19928074.1| [protein-PII] uridylyltransferase [Escherichia coli KTE162]
gi|432709012|ref|ZP_19944081.1| [protein-PII] uridylyltransferase [Escherichia coli KTE6]
gi|432721767|ref|ZP_19956696.1| [protein-PII] uridylyltransferase [Escherichia coli KTE17]
gi|432726177|ref|ZP_19961066.1| [protein-PII] uridylyltransferase [Escherichia coli KTE18]
gi|432730888|ref|ZP_19965749.1| [protein-PII] uridylyltransferase [Escherichia coli KTE45]
gi|432739945|ref|ZP_19974668.1| [protein-PII] uridylyltransferase [Escherichia coli KTE23]
gi|432762439|ref|ZP_19996903.1| [protein-PII] uridylyltransferase [Escherichia coli KTE46]
gi|432800494|ref|ZP_20034485.1| [protein-PII] uridylyltransferase [Escherichia coli KTE84]
gi|432892742|ref|ZP_20104909.1| [protein-PII] uridylyltransferase [Escherichia coli KTE165]
gi|432917154|ref|ZP_20121825.1| [protein-PII] uridylyltransferase [Escherichia coli KTE173]
gi|432924449|ref|ZP_20126736.1| [protein-PII] uridylyltransferase [Escherichia coli KTE175]
gi|432979554|ref|ZP_20168342.1| [protein-PII] uridylyltransferase [Escherichia coli KTE211]
gi|432989111|ref|ZP_20177784.1| [protein-PII] uridylyltransferase [Escherichia coli KTE217]
gi|433071078|ref|ZP_20257795.1| [protein-PII] uridylyltransferase [Escherichia coli KTE129]
gi|433076325|ref|ZP_20262905.1| [protein-PII] uridylyltransferase [Escherichia coli KTE131]
gi|433095047|ref|ZP_20281273.1| [protein-PII] uridylyltransferase [Escherichia coli KTE139]
gi|433104350|ref|ZP_20290375.1| [protein-PII] uridylyltransferase [Escherichia coli KTE148]
gi|433109346|ref|ZP_20295230.1| [protein-PII] uridylyltransferase [Escherichia coli KTE150]
gi|433118644|ref|ZP_20304367.1| [protein-PII] uridylyltransferase [Escherichia coli KTE157]
gi|433181608|ref|ZP_20365920.1| [protein-PII] uridylyltransferase [Escherichia coli KTE85]
gi|123148412|sp|Q0TLG6.1|GLND_ECOL5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|110341978|gb|ABG68215.1| [protein-PII] uridylyltransferase [Escherichia coli 536]
gi|190906929|gb|EDV66531.1| protein-P-II uridylyltransferase [Escherichia coli F11]
gi|281177392|dbj|BAI53722.1| uridylyltransferase [Escherichia coli SE15]
gi|300306607|gb|EFJ61127.1| protein-P-II uridylyltransferase [Escherichia coli MS 200-1]
gi|324012180|gb|EGB81399.1| protein-P-II uridylyltransferase [Escherichia coli MS 60-1]
gi|333968173|gb|AEG34978.1| Uridylyltransferase [Escherichia coli NA114]
gi|386248502|gb|EII94674.1| protein-P-II uridylyltransferase [Escherichia coli TW07793]
gi|388391192|gb|EIL52665.1| PII uridylyl-transferase [Escherichia coli KD1]
gi|430919043|gb|ELC39994.1| [protein-PII] uridylyltransferase [Escherichia coli KTE25]
gi|430933279|gb|ELC53690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE28]
gi|430947878|gb|ELC67566.1| [protein-PII] uridylyltransferase [Escherichia coli KTE178]
gi|430988222|gb|ELD04722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE205]
gi|431001477|gb|ELD17060.1| [protein-PII] uridylyltransferase [Escherichia coli KTE206]
gi|431032911|gb|ELD45617.1| [protein-PII] uridylyltransferase [Escherichia coli KTE216]
gi|431094815|gb|ELE00444.1| [protein-PII] uridylyltransferase [Escherichia coli KTE49]
gi|431123119|gb|ELE25862.1| [protein-PII] uridylyltransferase [Escherichia coli KTE57]
gi|431237874|gb|ELF32856.1| [protein-PII] uridylyltransferase [Escherichia coli KTE162]
gi|431252733|gb|ELF46247.1| [protein-PII] uridylyltransferase [Escherichia coli KTE6]
gi|431268980|gb|ELF60341.1| [protein-PII] uridylyltransferase [Escherichia coli KTE17]
gi|431277425|gb|ELF68439.1| [protein-PII] uridylyltransferase [Escherichia coli KTE18]
gi|431278902|gb|ELF69875.1| [protein-PII] uridylyltransferase [Escherichia coli KTE45]
gi|431287317|gb|ELF78135.1| [protein-PII] uridylyltransferase [Escherichia coli KTE23]
gi|431302391|gb|ELF91577.1| [protein-PII] uridylyltransferase [Escherichia coli KTE46]
gi|431351390|gb|ELG38177.1| [protein-PII] uridylyltransferase [Escherichia coli KTE84]
gi|431426163|gb|ELH08208.1| [protein-PII] uridylyltransferase [Escherichia coli KTE165]
gi|431448439|gb|ELH29156.1| [protein-PII] uridylyltransferase [Escherichia coli KTE173]
gi|431450090|gb|ELH30582.1| [protein-PII] uridylyltransferase [Escherichia coli KTE175]
gi|431498504|gb|ELH77690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE211]
gi|431500011|gb|ELH79028.1| [protein-PII] uridylyltransferase [Escherichia coli KTE217]
gi|431595627|gb|ELI65620.1| [protein-PII] uridylyltransferase [Escherichia coli KTE129]
gi|431603319|gb|ELI72745.1| [protein-PII] uridylyltransferase [Escherichia coli KTE131]
gi|431620785|gb|ELI89612.1| [protein-PII] uridylyltransferase [Escherichia coli KTE139]
gi|431633508|gb|ELJ01788.1| [protein-PII] uridylyltransferase [Escherichia coli KTE150]
gi|431634794|gb|ELJ03015.1| [protein-PII] uridylyltransferase [Escherichia coli KTE148]
gi|431650467|gb|ELJ17788.1| [protein-PII] uridylyltransferase [Escherichia coli KTE157]
gi|431712755|gb|ELJ77033.1| [protein-PII] uridylyltransferase [Escherichia coli KTE85]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|417126665|ref|ZP_11974219.1| protein-P-II uridylyltransferase [Escherichia coli 97.0246]
gi|386144915|gb|EIG91379.1| protein-P-II uridylyltransferase [Escherichia coli 97.0246]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|422834457|ref|ZP_16882519.1| uridylyltransferase [Escherichia coli E101]
gi|371601977|gb|EHN90696.1| uridylyltransferase [Escherichia coli E101]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|365142822|ref|ZP_09347861.1| [protein-PII] uridylyltransferase [Klebsiella sp. 4_1_44FAA]
gi|363651116|gb|EHL90197.1| [protein-PII] uridylyltransferase [Klebsiella sp. 4_1_44FAA]
Length = 887
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|125540993|gb|EAY87388.1| hypothetical protein OsI_08795 [Oryza sativa Indica Group]
Length = 223
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 22/129 (17%)
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGV------QAA 122
I SDG WF+ + + ++ + A S S R S+G+ A
Sbjct: 58 IWSDGRWFIRSWTSSMSPTASVASSPTT----------ASSPTSSRLSLGMWNGPTRPMA 107
Query: 123 LEH-TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
LE T +ELTG R GL+SEVFAVL+D+ C V+ W H + ++++ +E T
Sbjct: 108 LEGLTALELTGAGRTGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNEET----- 162
Query: 182 DPDTLAKIK 190
D + +A+I+
Sbjct: 163 DTERMARIE 171
>gi|420378472|ref|ZP_14877976.1| protein-P-II uridylyltransferase [Shigella dysenteriae 225-75]
gi|391307413|gb|EIQ65146.1| protein-P-II uridylyltransferase [Shigella dysenteriae 225-75]
Length = 831
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 634 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 692
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 693 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 750
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 751 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 810
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 811 NELQQEVHQRL 821
>gi|152968761|ref|YP_001333870.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|424935000|ref|ZP_18353372.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|150953610|gb|ABR75640.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|407809187|gb|EKF80438.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
Length = 887
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|262044764|ref|ZP_06017810.1| uridylyltransferase, partial [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259037876|gb|EEW39101.1| uridylyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 230
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 33 NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 91
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I LE I +R+ + +
Sbjct: 92 FIVLEPDGSPLS--ADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPT 149
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 150 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 209
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 210 NELQQEVQQRL 220
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 32 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 90
Query: 79 VFHVTDQNGNKLSED-----------DVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS D +++R Q PR A R V H
Sbjct: 91 TFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 150
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 151 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 202
>gi|157157798|ref|YP_001461336.1| PII uridylyl-transferase [Escherichia coli E24377A]
gi|166990442|sp|A7ZHQ7.1|GLND_ECO24 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|157079828|gb|ABV19536.1| protein-P-II uridylyltransferase [Escherichia coli E24377A]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|74310787|ref|YP_309206.1| PII uridylyl-transferase [Shigella sonnei Ss046]
gi|383176774|ref|YP_005454779.1| PII uridylyl-transferase [Shigella sonnei 53G]
gi|414574356|ref|ZP_11431571.1| protein-P-II uridylyltransferase [Shigella sonnei 3233-85]
gi|415849980|ref|ZP_11527012.1| protein-P-II uridylyltransferase [Shigella sonnei 53G]
gi|418261635|ref|ZP_12883590.1| protein-P-II uridylyltransferase [Shigella sonnei str. Moseley]
gi|420356739|ref|ZP_14857764.1| protein-P-II uridylyltransferase [Shigella sonnei 3226-85]
gi|420361706|ref|ZP_14862638.1| protein-P-II uridylyltransferase [Shigella sonnei 4822-66]
gi|91206757|sp|Q3Z5J1.1|GLND_SHISS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|73854264|gb|AAZ86971.1| protein PII [Shigella sonnei Ss046]
gi|323165867|gb|EFZ51649.1| protein-P-II uridylyltransferase [Shigella sonnei 53G]
gi|391290049|gb|EIQ48525.1| protein-P-II uridylyltransferase [Shigella sonnei 3226-85]
gi|391290241|gb|EIQ48716.1| protein-P-II uridylyltransferase [Shigella sonnei 3233-85]
gi|391297289|gb|EIQ55343.1| protein-P-II uridylyltransferase [Shigella sonnei 4822-66]
gi|397903467|gb|EJL19764.1| protein-P-II uridylyltransferase [Shigella sonnei str. Moseley]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|260866316|ref|YP_003232718.1| uridylyltransferase [Escherichia coli O111:H- str. 11128]
gi|415823979|ref|ZP_11512354.1| protein-P-II uridylyltransferase [Escherichia coli OK1180]
gi|417190934|ref|ZP_12013530.1| protein-P-II uridylyltransferase [Escherichia coli 4.0522]
gi|417216630|ref|ZP_12023302.1| protein-P-II uridylyltransferase [Escherichia coli JB1-95]
gi|417589786|ref|ZP_12240507.1| protein-P-II uridylyltransferase [Escherichia coli 2534-86]
gi|419195124|ref|ZP_13738539.1| protein-P-II uridylyltransferase [Escherichia coli DEC8A]
gi|419201288|ref|ZP_13744520.1| protein-P-II uridylyltransferase [Escherichia coli DEC8B]
gi|419219379|ref|ZP_13762340.1| protein-P-II uridylyltransferase [Escherichia coli DEC8E]
gi|419891816|ref|ZP_14411857.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9570]
gi|419893446|ref|ZP_14413430.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9574]
gi|420087276|ref|ZP_14599247.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9602]
gi|420092445|ref|ZP_14604147.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9634]
gi|424774770|ref|ZP_18201780.1| PII uridylyl-transferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257762672|dbj|BAI34167.1| uridylyltransferase [Escherichia coli O111:H- str. 11128]
gi|323176480|gb|EFZ62072.1| protein-P-II uridylyltransferase [Escherichia coli OK1180]
gi|345346144|gb|EGW78480.1| protein-P-II uridylyltransferase [Escherichia coli 2534-86]
gi|378054638|gb|EHW16916.1| protein-P-II uridylyltransferase [Escherichia coli DEC8A]
gi|378058195|gb|EHW20415.1| protein-P-II uridylyltransferase [Escherichia coli DEC8B]
gi|378073885|gb|EHW35930.1| protein-P-II uridylyltransferase [Escherichia coli DEC8E]
gi|386191906|gb|EIH80647.1| protein-P-II uridylyltransferase [Escherichia coli 4.0522]
gi|386193492|gb|EIH87776.1| protein-P-II uridylyltransferase [Escherichia coli JB1-95]
gi|388348835|gb|EIL14403.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9570]
gi|388367380|gb|EIL31064.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9574]
gi|394393526|gb|EJE70211.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9602]
gi|394400463|gb|EJE76377.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9634]
gi|421933626|gb|EKT91413.1| PII uridylyl-transferase [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|238893163|ref|YP_002917897.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|330001644|ref|ZP_08304070.1| protein-P-II uridylyltransferase [Klebsiella sp. MS 92-3]
gi|386033242|ref|YP_005953155.1| PII uridylyl-transferase [Klebsiella pneumoniae KCTC 2242]
gi|419975543|ref|ZP_14490952.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981409|ref|ZP_14496685.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986654|ref|ZP_14501784.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992331|ref|ZP_14507288.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998633|ref|ZP_14513418.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004521|ref|ZP_14519157.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010288|ref|ZP_14524763.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016399|ref|ZP_14530691.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021806|ref|ZP_14535982.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027326|ref|ZP_14541320.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033248|ref|ZP_14547055.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038706|ref|ZP_14552350.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044836|ref|ZP_14558312.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050742|ref|ZP_14564038.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056029|ref|ZP_14569190.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420060976|ref|ZP_14573970.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067686|ref|ZP_14580476.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072904|ref|ZP_14585537.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420078757|ref|ZP_14591211.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|424829043|ref|ZP_18253771.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078298|ref|ZP_18481401.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425079945|ref|ZP_18483042.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425088930|ref|ZP_18492023.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090064|ref|ZP_18493149.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428931636|ref|ZP_19005229.1| PII uridylyl-transferase [Klebsiella pneumoniae JHCK1]
gi|428940394|ref|ZP_19013479.1| PII uridylyl-transferase [Klebsiella pneumoniae VA360]
gi|449058387|ref|ZP_21736596.1| PII uridylyl-transferase [Klebsiella pneumoniae hvKP1]
gi|238545479|dbj|BAH61830.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328537586|gb|EGF63806.1| protein-P-II uridylyltransferase [Klebsiella sp. MS 92-3]
gi|339760370|gb|AEJ96590.1| PII uridylyl-transferase [Klebsiella pneumoniae KCTC 2242]
gi|397342764|gb|EJJ35920.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397343243|gb|EJJ36392.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397347338|gb|EJJ40446.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397359874|gb|EJJ52561.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397361256|gb|EJJ53921.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397365516|gb|EJJ58139.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374980|gb|EJJ67288.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397379053|gb|EJJ71253.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397386391|gb|EJJ78474.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397393624|gb|EJJ85377.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397395588|gb|EJJ87293.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403997|gb|EJJ95529.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397410579|gb|EJK01856.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397411053|gb|EJK02318.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397421045|gb|EJK12081.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427733|gb|EJK18495.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397432077|gb|EJK22742.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438573|gb|EJK29065.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444465|gb|EJK34740.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|405590159|gb|EKB63693.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405600068|gb|EKB73235.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405606870|gb|EKB79840.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405614628|gb|EKB87327.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|414706460|emb|CCN28164.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426302350|gb|EKV64555.1| PII uridylyl-transferase [Klebsiella pneumoniae VA360]
gi|426307908|gb|EKV69981.1| PII uridylyl-transferase [Klebsiella pneumoniae JHCK1]
gi|448875381|gb|EMB10400.1| PII uridylyl-transferase [Klebsiella pneumoniae hvKP1]
Length = 887
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|82542766|ref|YP_406713.1| PII uridylyl-transferase [Shigella boydii Sb227]
gi|157159632|ref|YP_001456950.1| PII uridylyl-transferase [Escherichia coli HS]
gi|191166326|ref|ZP_03028158.1| protein-P-II uridylyltransferase [Escherichia coli B7A]
gi|193063184|ref|ZP_03044275.1| protein-P-II uridylyltransferase [Escherichia coli E22]
gi|194428269|ref|ZP_03060811.1| protein-P-II uridylyltransferase [Escherichia coli B171]
gi|209917357|ref|YP_002291441.1| PII uridylyl-transferase [Escherichia coli SE11]
gi|218552746|ref|YP_002385659.1| PII uridylyl-transferase [Escherichia coli IAI1]
gi|218693631|ref|YP_002401298.1| PII uridylyl-transferase [Escherichia coli 55989]
gi|260842399|ref|YP_003220177.1| uridylyltransferase [Escherichia coli O103:H2 str. 12009]
gi|293418053|ref|ZP_06660675.1| P-II uridylyltransferase [Escherichia coli B185]
gi|293476824|ref|ZP_06665232.1| protein-P-II uridylyltransferase [Escherichia coli B088]
gi|300816207|ref|ZP_07096430.1| protein-P-II uridylyltransferase [Escherichia coli MS 107-1]
gi|300901986|ref|ZP_07120013.1| protein-P-II uridylyltransferase [Escherichia coli MS 84-1]
gi|300923041|ref|ZP_07139108.1| protein-P-II uridylyltransferase [Escherichia coli MS 182-1]
gi|301305303|ref|ZP_07211399.1| protein-P-II uridylyltransferase [Escherichia coli MS 124-1]
gi|301330035|ref|ZP_07222719.1| protein-P-II uridylyltransferase [Escherichia coli MS 78-1]
gi|309796344|ref|ZP_07690753.1| protein-P-II uridylyltransferase [Escherichia coli MS 145-7]
gi|331651072|ref|ZP_08352100.1| protein-P-II uridylyltransferase [Escherichia coli M718]
gi|332282841|ref|ZP_08395254.1| uridylyltransferase [Shigella sp. D9]
gi|407467621|ref|YP_006785937.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483662|ref|YP_006780811.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484202|ref|YP_006771748.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415801931|ref|ZP_11499822.1| protein-P-II uridylyltransferase [Escherichia coli E128010]
gi|415832528|ref|ZP_11517955.1| protein-P-II uridylyltransferase [Escherichia coli OK1357]
gi|415864366|ref|ZP_11537460.1| protein-P-II uridylyltransferase [Escherichia coli MS 85-1]
gi|415877377|ref|ZP_11543554.1| protein-P-II uridylyltransferase [Escherichia coli MS 79-10]
gi|416274879|ref|ZP_11643840.1| PII uridylyl-transferase [Shigella dysenteriae CDC 74-1112]
gi|416294321|ref|ZP_11650806.1| PII uridylyl-transferase [Shigella flexneri CDC 796-83]
gi|416342928|ref|ZP_11676932.1| PII uridylyl-transferase [Escherichia coli EC4100B]
gi|417134649|ref|ZP_11979434.1| protein-P-II uridylyltransferase [Escherichia coli 5.0588]
gi|417151596|ref|ZP_11991123.1| protein-P-II uridylyltransferase [Escherichia coli 1.2264]
gi|417152570|ref|ZP_11991361.1| protein-P-II uridylyltransferase [Escherichia coli 96.0497]
gi|417168471|ref|ZP_12000922.1| protein-P-II uridylyltransferase [Escherichia coli 99.0741]
gi|417174527|ref|ZP_12004323.1| protein-P-II uridylyltransferase [Escherichia coli 3.2608]
gi|417181828|ref|ZP_12008664.1| protein-P-II uridylyltransferase [Escherichia coli 93.0624]
gi|417244406|ref|ZP_12038416.1| protein-P-II uridylyltransferase [Escherichia coli 9.0111]
gi|417252574|ref|ZP_12044333.1| protein-P-II uridylyltransferase [Escherichia coli 4.0967]
gi|417273890|ref|ZP_12061235.1| protein-P-II uridylyltransferase [Escherichia coli 2.4168]
gi|417579384|ref|ZP_12230210.1| protein-P-II uridylyltransferase [Escherichia coli STEC_B2F1]
gi|417595014|ref|ZP_12245690.1| protein-P-II uridylyltransferase [Escherichia coli 3030-1]
gi|417606095|ref|ZP_12256628.1| protein-P-II uridylyltransferase [Escherichia coli STEC_DG131-3]
gi|417621396|ref|ZP_12271727.1| protein-P-II uridylyltransferase [Escherichia coli STEC_H.1.8]
gi|417637433|ref|ZP_12287614.1| protein-P-II uridylyltransferase [Escherichia coli TX1999]
gi|417665235|ref|ZP_12314804.1| protein-P-II uridylyltransferase [Escherichia coli STEC_O31]
gi|417680443|ref|ZP_12329830.1| protein-P-II uridylyltransferase [Shigella boydii 3594-74]
gi|417803508|ref|ZP_12450548.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. LB226692]
gi|417831269|ref|ZP_12477797.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 01-09591]
gi|417864311|ref|ZP_12509357.1| glnD [Escherichia coli O104:H4 str. C227-11]
gi|419168136|ref|ZP_13712537.1| protein-P-II uridylyltransferase [Escherichia coli DEC7A]
gi|419179187|ref|ZP_13722814.1| protein-P-II uridylyltransferase [Escherichia coli DEC7C]
gi|419184646|ref|ZP_13728172.1| protein-P-II uridylyltransferase [Escherichia coli DEC7D]
gi|419189914|ref|ZP_13733387.1| protein-P-II uridylyltransferase [Escherichia coli DEC7E]
gi|419276270|ref|ZP_13818542.1| protein-P-II uridylyltransferase [Escherichia coli DEC10E]
gi|419287677|ref|ZP_13829796.1| protein-P-II uridylyltransferase [Escherichia coli DEC11A]
gi|419292975|ref|ZP_13835037.1| protein-P-II uridylyltransferase [Escherichia coli DEC11B]
gi|419304672|ref|ZP_13846589.1| protein-P-II uridylyltransferase [Escherichia coli DEC11D]
gi|419309707|ref|ZP_13851586.1| protein-P-II uridylyltransferase [Escherichia coli DEC11E]
gi|419315010|ref|ZP_13856843.1| protein-P-II uridylyltransferase [Escherichia coli DEC12A]
gi|419320807|ref|ZP_13862552.1| protein-P-II uridylyltransferase [Escherichia coli DEC12B]
gi|419327009|ref|ZP_13868646.1| protein-P-II uridylyltransferase [Escherichia coli DEC12C]
gi|419332426|ref|ZP_13873993.1| protein-P-II uridylyltransferase [Escherichia coli DEC12D]
gi|419338178|ref|ZP_13879669.1| protein-P-II uridylyltransferase [Escherichia coli DEC12E]
gi|419343833|ref|ZP_13885219.1| protein-P-II uridylyltransferase [Escherichia coli DEC13A]
gi|419348254|ref|ZP_13889609.1| protein-P-II uridylyltransferase [Escherichia coli DEC13B]
gi|419353157|ref|ZP_13894445.1| protein-P-II uridylyltransferase [Escherichia coli DEC13C]
gi|419358502|ref|ZP_13899734.1| protein-P-II uridylyltransferase [Escherichia coli DEC13D]
gi|419363522|ref|ZP_13904706.1| protein-P-II uridylyltransferase [Escherichia coli DEC13E]
gi|419368445|ref|ZP_13909579.1| protein-P-II uridylyltransferase [Escherichia coli DEC14A]
gi|419373603|ref|ZP_13914665.1| protein-P-II uridylyltransferase [Escherichia coli DEC14B]
gi|419379028|ref|ZP_13920011.1| protein-P-II uridylyltransferase [Escherichia coli DEC14C]
gi|419384286|ref|ZP_13925194.1| protein-P-II uridylyltransferase [Escherichia coli DEC14D]
gi|419389581|ref|ZP_13930424.1| protein-P-II uridylyltransferase [Escherichia coli DEC15A]
gi|419394753|ref|ZP_13935541.1| protein-P-II uridylyltransferase [Escherichia coli DEC15B]
gi|419400145|ref|ZP_13940880.1| protein-P-II uridylyltransferase [Escherichia coli DEC15C]
gi|419410476|ref|ZP_13951155.1| protein-P-II uridylyltransferase [Escherichia coli DEC15D]
gi|419410794|ref|ZP_13951471.1| protein-P-II uridylyltransferase [Escherichia coli DEC15E]
gi|419804906|ref|ZP_14330055.1| protein-P-II uridylyltransferase [Escherichia coli AI27]
gi|419865209|ref|ZP_14387598.1| PII uridylyl-transferase [Escherichia coli O103:H25 str. CVM9340]
gi|419870122|ref|ZP_14392259.1| PII uridylyl-transferase [Escherichia coli O103:H2 str. CVM9450]
gi|419951487|ref|ZP_14467678.1| PII uridylyl-transferase [Escherichia coli CUMT8]
gi|420323822|ref|ZP_14825612.1| protein-P-II uridylyltransferase [Shigella flexneri CCH060]
gi|420334427|ref|ZP_14836050.1| protein-P-II uridylyltransferase [Shigella flexneri K-315]
gi|420351040|ref|ZP_14852243.1| protein-P-II uridylyltransferase [Shigella boydii 4444-74]
gi|420383805|ref|ZP_14883197.1| protein-P-II uridylyltransferase [Escherichia coli EPECa12]
gi|420389496|ref|ZP_14888770.1| protein-P-II uridylyltransferase [Escherichia coli EPEC C342-62]
gi|421680885|ref|ZP_16120727.1| protein-P-II uridylyltransferase [Shigella flexneri 1485-80]
gi|422354200|ref|ZP_16434942.1| protein-P-II uridylyltransferase [Escherichia coli MS 117-3]
gi|422761843|ref|ZP_16815601.1| protein-P-II uridylyltransferase [Escherichia coli E1167]
gi|422957493|ref|ZP_16969707.1| [protein-PII] uridylyltransferase [Escherichia coli H494]
gi|422990869|ref|ZP_16981640.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C227-11]
gi|422992809|ref|ZP_16983573.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C236-11]
gi|422998018|ref|ZP_16988774.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
09-7901]
gi|423006502|ref|ZP_16997246.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
04-8351]
gi|423008124|ref|ZP_16998862.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-3677]
gi|423022310|ref|ZP_17013013.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4404]
gi|423027465|ref|ZP_17018158.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4522]
gi|423033302|ref|ZP_17023986.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4623]
gi|423036168|ref|ZP_17026842.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041288|ref|ZP_17031955.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047974|ref|ZP_17038631.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423056512|ref|ZP_17045317.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058523|ref|ZP_17047319.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|425420765|ref|ZP_18802009.1| protein-P-II uridylyltransferase [Escherichia coli 0.1288]
gi|427803239|ref|ZP_18970306.1| protein PII [Escherichia coli chi7122]
gi|427807844|ref|ZP_18974909.1| protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli]
gi|429722367|ref|ZP_19257266.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774445|ref|ZP_19306449.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02030]
gi|429779705|ref|ZP_19311661.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783760|ref|ZP_19315674.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02092]
gi|429789098|ref|ZP_19320974.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02093]
gi|429795328|ref|ZP_19327155.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02281]
gi|429801254|ref|ZP_19333033.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02318]
gi|429804886|ref|ZP_19336634.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02913]
gi|429809697|ref|ZP_19341400.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03439]
gi|429815457|ref|ZP_19347117.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-04080]
gi|429820668|ref|ZP_19352283.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03943]
gi|429906719|ref|ZP_19372689.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910914|ref|ZP_19376871.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429916754|ref|ZP_19382695.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921792|ref|ZP_19387714.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927609|ref|ZP_19393516.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429931542|ref|ZP_19397438.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429938085|ref|ZP_19403966.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429938800|ref|ZP_19404674.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946441|ref|ZP_19412297.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949089|ref|ZP_19414937.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957356|ref|ZP_19423185.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432479490|ref|ZP_19721456.1| [protein-PII] uridylyltransferase [Escherichia coli KTE210]
gi|432808799|ref|ZP_20042709.1| [protein-PII] uridylyltransferase [Escherichia coli KTE91]
gi|432812316|ref|ZP_20046166.1| [protein-PII] uridylyltransferase [Escherichia coli KTE101]
gi|432830141|ref|ZP_20063751.1| [protein-PII] uridylyltransferase [Escherichia coli KTE135]
gi|432856975|ref|ZP_20084226.1| [protein-PII] uridylyltransferase [Escherichia coli KTE144]
gi|432932426|ref|ZP_20132328.1| [protein-PII] uridylyltransferase [Escherichia coli KTE184]
gi|432966307|ref|ZP_20155227.1| [protein-PII] uridylyltransferase [Escherichia coli KTE203]
gi|433128453|ref|ZP_20313941.1| [protein-PII] uridylyltransferase [Escherichia coli KTE163]
gi|433133354|ref|ZP_20318740.1| [protein-PII] uridylyltransferase [Escherichia coli KTE166]
gi|433191955|ref|ZP_20375988.1| [protein-PII] uridylyltransferase [Escherichia coli KTE90]
gi|443616178|ref|YP_007380034.1| PII uridylyl-transferase [Escherichia coli APEC O78]
gi|450209540|ref|ZP_21893955.1| PII uridylyl-transferase [Escherichia coli O08]
gi|91206755|sp|Q325X3.1|GLND_SHIBS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166990443|sp|A7ZWB3.1|GLND_ECOHS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|226723942|sp|B7M1A6.1|GLND_ECO8A RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238057816|sp|B6HZE1.1|GLND_ECOSE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798832|sp|B7LGM7.1|GLND_ECO55 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|81244177|gb|ABB64885.1| protein PII [Shigella boydii Sb227]
gi|157065312|gb|ABV04567.1| protein-P-II uridylyltransferase [Escherichia coli HS]
gi|190903577|gb|EDV63294.1| protein-P-II uridylyltransferase [Escherichia coli B7A]
gi|192931092|gb|EDV83695.1| protein-P-II uridylyltransferase [Escherichia coli E22]
gi|194413644|gb|EDX29924.1| protein-P-II uridylyltransferase [Escherichia coli B171]
gi|209910616|dbj|BAG75690.1| uridylyltransferase [Escherichia coli SE11]
gi|218350363|emb|CAU96046.1| uridylyltransferase [Escherichia coli 55989]
gi|218359514|emb|CAQ97052.1| uridylyltransferase [Escherichia coli IAI1]
gi|257757546|dbj|BAI29043.1| uridylyltransferase [Escherichia coli O103:H2 str. 12009]
gi|291321277|gb|EFE60719.1| protein-P-II uridylyltransferase [Escherichia coli B088]
gi|291430771|gb|EFF03769.1| P-II uridylyltransferase [Escherichia coli B185]
gi|300405872|gb|EFJ89410.1| protein-P-II uridylyltransferase [Escherichia coli MS 84-1]
gi|300420668|gb|EFK03979.1| protein-P-II uridylyltransferase [Escherichia coli MS 182-1]
gi|300531414|gb|EFK52476.1| protein-P-II uridylyltransferase [Escherichia coli MS 107-1]
gi|300839408|gb|EFK67168.1| protein-P-II uridylyltransferase [Escherichia coli MS 124-1]
gi|300843946|gb|EFK71706.1| protein-P-II uridylyltransferase [Escherichia coli MS 78-1]
gi|308120048|gb|EFO57310.1| protein-P-II uridylyltransferase [Escherichia coli MS 145-7]
gi|315254969|gb|EFU34937.1| protein-P-II uridylyltransferase [Escherichia coli MS 85-1]
gi|320173353|gb|EFW48556.1| PII uridylyl-transferase [Shigella dysenteriae CDC 74-1112]
gi|320186587|gb|EFW61312.1| PII uridylyl-transferase [Shigella flexneri CDC 796-83]
gi|320200309|gb|EFW74895.1| PII uridylyl-transferase [Escherichia coli EC4100B]
gi|323160215|gb|EFZ46174.1| protein-P-II uridylyltransferase [Escherichia coli E128010]
gi|323181673|gb|EFZ67087.1| protein-P-II uridylyltransferase [Escherichia coli OK1357]
gi|324017826|gb|EGB87045.1| protein-P-II uridylyltransferase [Escherichia coli MS 117-3]
gi|324118286|gb|EGC12181.1| protein-P-II uridylyltransferase [Escherichia coli E1167]
gi|331051526|gb|EGI23575.1| protein-P-II uridylyltransferase [Escherichia coli M718]
gi|332098788|gb|EGJ03748.1| protein-P-II uridylyltransferase [Shigella boydii 3594-74]
gi|332105193|gb|EGJ08539.1| uridylyltransferase [Shigella sp. D9]
gi|340736138|gb|EGR65188.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 01-09591]
gi|340742054|gb|EGR76195.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. LB226692]
gi|341917600|gb|EGT67215.1| glnD [Escherichia coli O104:H4 str. C227-11]
gi|342928012|gb|EGU96734.1| protein-P-II uridylyltransferase [Escherichia coli MS 79-10]
gi|345344682|gb|EGW77047.1| protein-P-II uridylyltransferase [Escherichia coli STEC_B2F1]
gi|345363226|gb|EGW95369.1| protein-P-II uridylyltransferase [Escherichia coli 3030-1]
gi|345366263|gb|EGW98355.1| protein-P-II uridylyltransferase [Escherichia coli STEC_DG131-3]
gi|345387158|gb|EGX16986.1| protein-P-II uridylyltransferase [Escherichia coli STEC_H.1.8]
gi|345395753|gb|EGX25491.1| protein-P-II uridylyltransferase [Escherichia coli TX1999]
gi|354859368|gb|EHF19816.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
04-8351]
gi|354859855|gb|EHF20302.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C227-11]
gi|354866552|gb|EHF26975.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C236-11]
gi|354876886|gb|EHF37246.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
09-7901]
gi|354881895|gb|EHF42223.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4404]
gi|354884993|gb|EHF45304.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-3677]
gi|354886440|gb|EHF46727.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4522]
gi|354889956|gb|EHF50203.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4623]
gi|354902156|gb|EHF62278.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354905482|gb|EHF65565.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354907989|gb|EHF68045.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354910260|gb|EHF70288.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354918461|gb|EHF78417.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|371598110|gb|EHN86924.1| [protein-PII] uridylyltransferase [Escherichia coli H494]
gi|378019418|gb|EHV82249.1| protein-P-II uridylyltransferase [Escherichia coli DEC7A]
gi|378028734|gb|EHV91351.1| protein-P-II uridylyltransferase [Escherichia coli DEC7C]
gi|378034273|gb|EHV96839.1| protein-P-II uridylyltransferase [Escherichia coli DEC7D]
gi|378043362|gb|EHW05798.1| protein-P-II uridylyltransferase [Escherichia coli DEC7E]
gi|378134831|gb|EHW96146.1| protein-P-II uridylyltransferase [Escherichia coli DEC10E]
gi|378136644|gb|EHW97935.1| protein-P-II uridylyltransferase [Escherichia coli DEC11A]
gi|378147747|gb|EHX08893.1| protein-P-II uridylyltransferase [Escherichia coli DEC11B]
gi|378154326|gb|EHX15402.1| protein-P-II uridylyltransferase [Escherichia coli DEC11D]
gi|378161916|gb|EHX22885.1| protein-P-II uridylyltransferase [Escherichia coli DEC11E]
gi|378176010|gb|EHX36818.1| protein-P-II uridylyltransferase [Escherichia coli DEC12B]
gi|378176507|gb|EHX37313.1| protein-P-II uridylyltransferase [Escherichia coli DEC12A]
gi|378177547|gb|EHX38338.1| protein-P-II uridylyltransferase [Escherichia coli DEC12C]
gi|378190837|gb|EHX51415.1| protein-P-II uridylyltransferase [Escherichia coli DEC13A]
gi|378192309|gb|EHX52872.1| protein-P-II uridylyltransferase [Escherichia coli DEC12D]
gi|378193927|gb|EHX54450.1| protein-P-II uridylyltransferase [Escherichia coli DEC12E]
gi|378205645|gb|EHX66055.1| protein-P-II uridylyltransferase [Escherichia coli DEC13B]
gi|378208604|gb|EHX68985.1| protein-P-II uridylyltransferase [Escherichia coli DEC13D]
gi|378209586|gb|EHX69955.1| protein-P-II uridylyltransferase [Escherichia coli DEC13C]
gi|378220379|gb|EHX80640.1| protein-P-II uridylyltransferase [Escherichia coli DEC13E]
gi|378223387|gb|EHX83611.1| protein-P-II uridylyltransferase [Escherichia coli DEC14A]
gi|378227565|gb|EHX87735.1| protein-P-II uridylyltransferase [Escherichia coli DEC14B]
gi|378235053|gb|EHX95126.1| protein-P-II uridylyltransferase [Escherichia coli DEC14C]
gi|378237817|gb|EHX97835.1| protein-P-II uridylyltransferase [Escherichia coli DEC14D]
gi|378246188|gb|EHY06120.1| protein-P-II uridylyltransferase [Escherichia coli DEC15A]
gi|378249941|gb|EHY09850.1| protein-P-II uridylyltransferase [Escherichia coli DEC15D]
gi|378252378|gb|EHY12269.1| protein-P-II uridylyltransferase [Escherichia coli DEC15C]
gi|378252436|gb|EHY12326.1| protein-P-II uridylyltransferase [Escherichia coli DEC15B]
gi|378261804|gb|EHY21595.1| protein-P-II uridylyltransferase [Escherichia coli DEC15E]
gi|384472082|gb|EIE56144.1| protein-P-II uridylyltransferase [Escherichia coli AI27]
gi|386152503|gb|EIH03792.1| protein-P-II uridylyltransferase [Escherichia coli 5.0588]
gi|386159787|gb|EIH21601.1| protein-P-II uridylyltransferase [Escherichia coli 1.2264]
gi|386169294|gb|EIH35802.1| protein-P-II uridylyltransferase [Escherichia coli 96.0497]
gi|386170519|gb|EIH42572.1| protein-P-II uridylyltransferase [Escherichia coli 99.0741]
gi|386177219|gb|EIH54698.1| protein-P-II uridylyltransferase [Escherichia coli 3.2608]
gi|386184817|gb|EIH67553.1| protein-P-II uridylyltransferase [Escherichia coli 93.0624]
gi|386211071|gb|EII21541.1| protein-P-II uridylyltransferase [Escherichia coli 9.0111]
gi|386216505|gb|EII32994.1| protein-P-II uridylyltransferase [Escherichia coli 4.0967]
gi|386234072|gb|EII66052.1| protein-P-II uridylyltransferase [Escherichia coli 2.4168]
gi|388338103|gb|EIL04580.1| PII uridylyl-transferase [Escherichia coli O103:H25 str. CVM9340]
gi|388340278|gb|EIL06525.1| PII uridylyl-transferase [Escherichia coli O103:H2 str. CVM9450]
gi|388414448|gb|EIL74405.1| PII uridylyl-transferase [Escherichia coli CUMT8]
gi|391257697|gb|EIQ16807.1| protein-P-II uridylyltransferase [Shigella flexneri CCH060]
gi|391268604|gb|EIQ27529.1| protein-P-II uridylyltransferase [Shigella flexneri K-315]
gi|391289874|gb|EIQ48358.1| protein-P-II uridylyltransferase [Shigella boydii 4444-74]
gi|391310154|gb|EIQ67810.1| protein-P-II uridylyltransferase [Escherichia coli EPECa12]
gi|391315729|gb|EIQ73253.1| protein-P-II uridylyltransferase [Escherichia coli EPEC C342-62]
gi|397787170|gb|EJK97999.1| protein-P-II uridylyltransferase [Escherichia coli STEC_O31]
gi|404342120|gb|EJZ68510.1| protein-P-II uridylyltransferase [Shigella flexneri 1485-80]
gi|406779364|gb|AFS58788.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055959|gb|AFS76010.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063656|gb|AFS84703.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408348565|gb|EKJ62661.1| protein-P-II uridylyltransferase [Escherichia coli 0.1288]
gi|412961421|emb|CCK45326.1| protein PII [Escherichia coli chi7122]
gi|412968023|emb|CCJ42636.1| protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli]
gi|429352495|gb|EKY89210.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02030]
gi|429353551|gb|EKY90259.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354049|gb|EKY90754.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02092]
gi|429367539|gb|EKZ04133.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02093]
gi|429368691|gb|EKZ05277.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02281]
gi|429370917|gb|EKZ07480.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02318]
gi|429383291|gb|EKZ19752.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02913]
gi|429386140|gb|EKZ22590.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03439]
gi|429387053|gb|EKZ23498.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03943]
gi|429398313|gb|EKZ34656.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-04080]
gi|429400029|gb|EKZ36347.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429400363|gb|EKZ36680.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429411454|gb|EKZ47664.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429413026|gb|EKZ49216.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429420078|gb|EKZ56212.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429423940|gb|EKZ60047.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429430097|gb|EKZ66164.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429436039|gb|EKZ72056.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429443223|gb|EKZ79176.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429445645|gb|EKZ81586.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429452114|gb|EKZ88001.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456965|gb|EKZ92808.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|431011628|gb|ELD25703.1| [protein-PII] uridylyltransferase [Escherichia coli KTE210]
gi|431352022|gb|ELG38808.1| [protein-PII] uridylyltransferase [Escherichia coli KTE91]
gi|431358419|gb|ELG45077.1| [protein-PII] uridylyltransferase [Escherichia coli KTE101]
gi|431380806|gb|ELG65445.1| [protein-PII] uridylyltransferase [Escherichia coli KTE135]
gi|431395483|gb|ELG78995.1| [protein-PII] uridylyltransferase [Escherichia coli KTE144]
gi|431457436|gb|ELH37775.1| [protein-PII] uridylyltransferase [Escherichia coli KTE184]
gi|431475668|gb|ELH55472.1| [protein-PII] uridylyltransferase [Escherichia coli KTE203]
gi|431652347|gb|ELJ19501.1| [protein-PII] uridylyltransferase [Escherichia coli KTE163]
gi|431663924|gb|ELJ30676.1| [protein-PII] uridylyltransferase [Escherichia coli KTE166]
gi|431723777|gb|ELJ87722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE90]
gi|443420686|gb|AGC85590.1| PII uridylyl-transferase [Escherichia coli APEC O78]
gi|449323625|gb|EMD13578.1| PII uridylyl-transferase [Escherichia coli O08]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|419761889|ref|ZP_14288140.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397745430|gb|EJK92637.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 887
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|419140131|ref|ZP_13684915.1| protein-P-II uridylyltransferase [Escherichia coli DEC5E]
gi|377978929|gb|EHV42208.1| protein-P-II uridylyltransferase [Escherichia coli DEC5E]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|433771601|ref|YP_007302068.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
gi|433663616|gb|AGB42692.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
Length = 933
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
+ IE+ G DRPGLLSE+ LSDL ++ A + T ++ Y+T + TG ID+P
Sbjct: 847 SVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT-DLTGQKIDNPAR 905
Query: 186 LAKIKRLLLYVLKG 199
+A I+ L+ L+G
Sbjct: 906 IATIRNRLIATLEG 919
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPR + N + + ++I+V+ ++ G L E+ L+DL L I A+I++ GE +D F+V
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 83 TDQNGNKL 90
TD G K+
Sbjct: 893 TDLTGQKI 900
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLLS++T + L + A +TT G + ++ FYV D +G NP + T
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIAT 908
Query: 396 I 396
I
Sbjct: 909 I 909
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 28/216 (12%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T I + +D P LLS + + N++ A+++T + A + S D+
Sbjct: 736 TEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILISREFDRDEDERRR 795
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
++ RL+ VL G + ++ K RR GS +
Sbjct: 796 AERVGRLIEDVLSG-----KSWLPEMIEKRTKPRR------------------GSKVFKI 832
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P + + ++V+ + DRP LL + TL+D+ + A + + +Y+
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLE 341
+ G I + A + N L A T EG++LE
Sbjct: 893 TDLTGQKIDNPARIATIRNRLIA-----TLEGVALE 923
>gi|193067726|ref|ZP_03048693.1| protein-P-II uridylyltransferase [Escherichia coli E110019]
gi|260853377|ref|YP_003227268.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. 11368]
gi|300824110|ref|ZP_07104230.1| protein-P-II uridylyltransferase [Escherichia coli MS 119-7]
gi|307311386|ref|ZP_07591028.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli W]
gi|331666408|ref|ZP_08367289.1| protein-P-II uridylyltransferase [Escherichia coli TA271]
gi|331680746|ref|ZP_08381405.1| protein-P-II uridylyltransferase [Escherichia coli H591]
gi|378714495|ref|YP_005279388.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli KO11FL]
gi|386607468|ref|YP_006122954.1| uridylyltransferase [Escherichia coli W]
gi|386698665|ref|YP_006162502.1| PII uridylyl-transferase [Escherichia coli KO11FL]
gi|386707895|ref|YP_006171616.1| PII uridylyl-transferase [Escherichia coli W]
gi|415780886|ref|ZP_11490673.1| protein-P-II uridylyltransferase [Escherichia coli EPECa14]
gi|417225071|ref|ZP_12028362.1| protein-P-II uridylyltransferase [Escherichia coli 96.154]
gi|417268668|ref|ZP_12056028.1| protein-P-II uridylyltransferase [Escherichia coli 3.3884]
gi|417295368|ref|ZP_12082621.1| protein-P-II uridylyltransferase [Escherichia coli 900105 (10e)]
gi|417600429|ref|ZP_12251016.1| protein-P-II uridylyltransferase [Escherichia coli STEC_94C]
gi|419207117|ref|ZP_13750248.1| protein-P-II uridylyltransferase [Escherichia coli DEC8C]
gi|419213540|ref|ZP_13756575.1| protein-P-II uridylyltransferase [Escherichia coli DEC8D]
gi|419224812|ref|ZP_13767707.1| protein-P-II uridylyltransferase [Escherichia coli DEC9A]
gi|419230692|ref|ZP_13773488.1| protein-P-II uridylyltransferase [Escherichia coli DEC9B]
gi|419235978|ref|ZP_13778731.1| protein-P-II uridylyltransferase [Escherichia coli DEC9C]
gi|419241565|ref|ZP_13784217.1| protein-P-II uridylyltransferase [Escherichia coli DEC9D]
gi|419246969|ref|ZP_13789588.1| protein-P-II uridylyltransferase [Escherichia coli DEC9E]
gi|419252804|ref|ZP_13795356.1| protein-P-II uridylyltransferase [Escherichia coli DEC10A]
gi|419258747|ref|ZP_13801211.1| protein-P-II uridylyltransferase [Escherichia coli DEC10B]
gi|419264574|ref|ZP_13806964.1| protein-P-II uridylyltransferase [Escherichia coli DEC10C]
gi|419270350|ref|ZP_13812685.1| protein-P-II uridylyltransferase [Escherichia coli DEC10D]
gi|419281797|ref|ZP_13824022.1| protein-P-II uridylyltransferase [Escherichia coli DEC10F]
gi|419875702|ref|ZP_14397527.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9534]
gi|419880111|ref|ZP_14401520.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9545]
gi|419904656|ref|ZP_14423647.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9942]
gi|419906045|ref|ZP_14424979.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli O26:H11 str.
CVM10026]
gi|419929371|ref|ZP_14447046.1| PII uridylyl-transferase [Escherichia coli 541-1]
gi|420100304|ref|ZP_14611484.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9455]
gi|420105948|ref|ZP_14616380.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9553]
gi|420113080|ref|ZP_14622845.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10021]
gi|420119492|ref|ZP_14628768.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10030]
gi|420125531|ref|ZP_14634333.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10224]
gi|420132862|ref|ZP_14641165.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9952]
gi|422776804|ref|ZP_16830458.1| protein-P-II uridylyltransferase [Escherichia coli H120]
gi|423709887|ref|ZP_17684241.1| [protein-PII] uridylyltransferase [Escherichia coli B799]
gi|424746707|ref|ZP_18174929.1| PII uridylyl-transferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756654|ref|ZP_18184460.1| PII uridylyl-transferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425376906|ref|ZP_18761338.1| protein-P-II uridylyltransferase [Escherichia coli EC1865]
gi|432379782|ref|ZP_19622757.1| [protein-PII] uridylyltransferase [Escherichia coli KTE12]
gi|432752992|ref|ZP_19987563.1| [protein-PII] uridylyltransferase [Escherichia coli KTE29]
gi|432833267|ref|ZP_20066816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE136]
gi|192959138|gb|EDV89574.1| protein-P-II uridylyltransferase [Escherichia coli E110019]
gi|257752026|dbj|BAI23528.1| uridylyltransferase [Escherichia coli O26:H11 str. 11368]
gi|300523387|gb|EFK44456.1| protein-P-II uridylyltransferase [Escherichia coli MS 119-7]
gi|306908365|gb|EFN38863.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli W]
gi|315059385|gb|ADT73712.1| uridylyltransferase [Escherichia coli W]
gi|323157997|gb|EFZ44099.1| protein-P-II uridylyltransferase [Escherichia coli EPECa14]
gi|323380056|gb|ADX52324.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli KO11FL]
gi|323945641|gb|EGB41690.1| protein-P-II uridylyltransferase [Escherichia coli H120]
gi|331066619|gb|EGI38496.1| protein-P-II uridylyltransferase [Escherichia coli TA271]
gi|331072209|gb|EGI43545.1| protein-P-II uridylyltransferase [Escherichia coli H591]
gi|345354587|gb|EGW86808.1| protein-P-II uridylyltransferase [Escherichia coli STEC_94C]
gi|378064659|gb|EHW26819.1| protein-P-II uridylyltransferase [Escherichia coli DEC8C]
gi|378070155|gb|EHW32238.1| protein-P-II uridylyltransferase [Escherichia coli DEC8D]
gi|378083212|gb|EHW45147.1| protein-P-II uridylyltransferase [Escherichia coli DEC9A]
gi|378083559|gb|EHW45491.1| protein-P-II uridylyltransferase [Escherichia coli DEC9B]
gi|378091386|gb|EHW53217.1| protein-P-II uridylyltransferase [Escherichia coli DEC9C]
gi|378095870|gb|EHW57652.1| protein-P-II uridylyltransferase [Escherichia coli DEC9D]
gi|378103985|gb|EHW65647.1| protein-P-II uridylyltransferase [Escherichia coli DEC9E]
gi|378108908|gb|EHW70520.1| protein-P-II uridylyltransferase [Escherichia coli DEC10A]
gi|378118769|gb|EHW80271.1| protein-P-II uridylyltransferase [Escherichia coli DEC10B]
gi|378120188|gb|EHW81669.1| protein-P-II uridylyltransferase [Escherichia coli DEC10C]
gi|378122094|gb|EHW83538.1| protein-P-II uridylyltransferase [Escherichia coli DEC10D]
gi|378141397|gb|EHX02614.1| protein-P-II uridylyltransferase [Escherichia coli DEC10F]
gi|383390192|gb|AFH15150.1| PII uridylyl-transferase [Escherichia coli KO11FL]
gi|383403587|gb|AFH09830.1| PII uridylyl-transferase [Escherichia coli W]
gi|385705105|gb|EIG42172.1| [protein-PII] uridylyltransferase [Escherichia coli B799]
gi|386200119|gb|EIH99110.1| protein-P-II uridylyltransferase [Escherichia coli 96.154]
gi|386227473|gb|EII54829.1| protein-P-II uridylyltransferase [Escherichia coli 3.3884]
gi|386260987|gb|EIJ16455.1| protein-P-II uridylyltransferase [Escherichia coli 900105 (10e)]
gi|388347920|gb|EIL13567.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9534]
gi|388367120|gb|EIL30815.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9942]
gi|388369919|gb|EIL33485.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9545]
gi|388379975|gb|EIL42601.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli O26:H11 str.
CVM10026]
gi|388403398|gb|EIL63925.1| PII uridylyl-transferase [Escherichia coli 541-1]
gi|394394956|gb|EJE71472.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10224]
gi|394412966|gb|EJE87052.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10021]
gi|394417696|gb|EJE91413.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9553]
gi|394421011|gb|EJE94506.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9455]
gi|394427722|gb|EJF00375.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9952]
gi|394431367|gb|EJF03575.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10030]
gi|408311107|gb|EKJ28119.1| protein-P-II uridylyltransferase [Escherichia coli EC1865]
gi|421947724|gb|EKU04787.1| PII uridylyl-transferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949576|gb|EKU06510.1| PII uridylyl-transferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|430894391|gb|ELC16680.1| [protein-PII] uridylyltransferase [Escherichia coli KTE12]
gi|431291650|gb|ELF82153.1| [protein-PII] uridylyltransferase [Escherichia coli KTE29]
gi|431389366|gb|ELG73079.1| [protein-PII] uridylyltransferase [Escherichia coli KTE136]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|444983645|ref|ZP_21300521.1| protein-P-II uridylyltransferase [Escherichia coli PA11]
gi|444601441|gb|ELV76248.1| protein-P-II uridylyltransferase [Escherichia coli PA11]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|432858470|ref|ZP_20084966.1| [protein-PII] uridylyltransferase [Escherichia coli KTE146]
gi|431408713|gb|ELG91896.1| [protein-PII] uridylyltransferase [Escherichia coli KTE146]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|418039549|ref|ZP_12677811.1| protein-P-II uridylyltransferase [Escherichia coli W26]
gi|383477532|gb|EID69449.1| protein-P-II uridylyltransferase [Escherichia coli W26]
Length = 802
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 605 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 663
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 664 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 721
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 722 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 781
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 782 NELQQEVHQRL 792
>gi|417632087|ref|ZP_12282313.1| protein-P-II uridylyltransferase [Escherichia coli STEC_MHI813]
gi|345368238|gb|EGX00245.1| protein-P-II uridylyltransferase [Escherichia coli STEC_MHI813]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|194433447|ref|ZP_03065726.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1012]
gi|416284601|ref|ZP_11647351.1| PII uridylyl-transferase [Shigella boydii ATCC 9905]
gi|417670845|ref|ZP_12320347.1| protein-P-II uridylyltransferase [Shigella dysenteriae 155-74]
gi|417687946|ref|ZP_12337198.1| protein-P-II uridylyltransferase [Shigella boydii 5216-82]
gi|420345258|ref|ZP_14846693.1| protein-P-II uridylyltransferase [Shigella boydii 965-58]
gi|194418375|gb|EDX34465.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1012]
gi|320179908|gb|EFW54852.1| PII uridylyl-transferase [Shigella boydii ATCC 9905]
gi|332095208|gb|EGJ00237.1| protein-P-II uridylyltransferase [Shigella boydii 5216-82]
gi|332098225|gb|EGJ03198.1| protein-P-II uridylyltransferase [Shigella dysenteriae 155-74]
gi|391277041|gb|EIQ35802.1| protein-P-II uridylyltransferase [Shigella boydii 965-58]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|450185103|ref|ZP_21888950.1| PII uridylyl-transferase [Escherichia coli SEPT362]
gi|449325373|gb|EMD15280.1| PII uridylyl-transferase [Escherichia coli SEPT362]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|432944731|ref|ZP_20141141.1| [protein-PII] uridylyltransferase [Escherichia coli KTE196]
gi|433041661|ref|ZP_20229200.1| [protein-PII] uridylyltransferase [Escherichia coli KTE117]
gi|431464662|gb|ELH44781.1| [protein-PII] uridylyltransferase [Escherichia coli KTE196]
gi|431561306|gb|ELI34690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE117]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|432777050|ref|ZP_20011306.1| [protein-PII] uridylyltransferase [Escherichia coli KTE59]
gi|432825646|ref|ZP_20059303.1| [protein-PII] uridylyltransferase [Escherichia coli KTE123]
gi|431331684|gb|ELG18930.1| [protein-PII] uridylyltransferase [Escherichia coli KTE59]
gi|431375030|gb|ELG60374.1| [protein-PII] uridylyltransferase [Escherichia coli KTE123]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|432763449|ref|ZP_19997906.1| [protein-PII] uridylyltransferase [Escherichia coli KTE48]
gi|431314524|gb|ELG02476.1| [protein-PII] uridylyltransferase [Escherichia coli KTE48]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|419921797|ref|ZP_14439833.1| PII uridylyl-transferase [Escherichia coli 541-15]
gi|388397206|gb|EIL58235.1| PII uridylyl-transferase [Escherichia coli 541-15]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|331671675|ref|ZP_08372473.1| protein-P-II uridylyltransferase [Escherichia coli TA280]
gi|331071520|gb|EGI42877.1| protein-P-II uridylyltransferase [Escherichia coli TA280]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|331645309|ref|ZP_08346420.1| protein-P-II uridylyltransferase [Escherichia coli M605]
gi|417660799|ref|ZP_12310380.1| [Protein-P2] uridylyltransferase [Escherichia coli AA86]
gi|330910017|gb|EGH38527.1| [Protein-P2] uridylyltransferase [Escherichia coli AA86]
gi|331046066|gb|EGI18185.1| protein-P-II uridylyltransferase [Escherichia coli M605]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|188492984|ref|ZP_03000254.1| protein-P-II uridylyltransferase [Escherichia coli 53638]
gi|404373478|ref|ZP_10978741.1| [protein-PII] uridylyltransferase [Escherichia sp. 1_1_43]
gi|432368158|ref|ZP_19611266.1| [protein-PII] uridylyltransferase [Escherichia coli KTE10]
gi|432483808|ref|ZP_19725737.1| [protein-PII] uridylyltransferase [Escherichia coli KTE212]
gi|432668988|ref|ZP_19904543.1| [protein-PII] uridylyltransferase [Escherichia coli KTE119]
gi|432879422|ref|ZP_20096449.1| [protein-PII] uridylyltransferase [Escherichia coli KTE154]
gi|433171932|ref|ZP_20356502.1| [protein-PII] uridylyltransferase [Escherichia coli KTE232]
gi|188488183|gb|EDU63286.1| protein-P-II uridylyltransferase [Escherichia coli 53638]
gi|226840692|gb|EEH72694.1| [protein-PII] uridylyltransferase [Escherichia sp. 1_1_43]
gi|430889819|gb|ELC12479.1| [protein-PII] uridylyltransferase [Escherichia coli KTE10]
gi|431020033|gb|ELD33424.1| [protein-PII] uridylyltransferase [Escherichia coli KTE212]
gi|431214693|gb|ELF12447.1| [protein-PII] uridylyltransferase [Escherichia coli KTE119]
gi|431415220|gb|ELG97770.1| [protein-PII] uridylyltransferase [Escherichia coli KTE154]
gi|431697236|gb|ELJ62381.1| [protein-PII] uridylyltransferase [Escherichia coli KTE232]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|432600676|ref|ZP_19836932.1| [protein-PII] uridylyltransferase [Escherichia coli KTE66]
gi|431144715|gb|ELE46409.1| [protein-PII] uridylyltransferase [Escherichia coli KTE66]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|15799849|ref|NP_285861.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EDL933]
gi|15829423|ref|NP_308196.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. Sakai]
gi|168751385|ref|ZP_02776407.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|168755779|ref|ZP_02780786.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|168764327|ref|ZP_02789334.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|168770361|ref|ZP_02795368.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|168777003|ref|ZP_02802010.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|168782058|ref|ZP_02807065.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|168789275|ref|ZP_02814282.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|168802321|ref|ZP_02827328.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|195938152|ref|ZP_03083534.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4024]
gi|208807602|ref|ZP_03249939.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208814167|ref|ZP_03255496.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208819098|ref|ZP_03259418.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209399551|ref|YP_002268774.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4115]
gi|217325875|ref|ZP_03441959.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254791300|ref|YP_003076137.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. TW14359]
gi|261226921|ref|ZP_05941202.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255325|ref|ZP_05947858.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. FRIK966]
gi|387505094|ref|YP_006157350.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. RM12579]
gi|387880725|ref|YP_006311027.1| PII uridylyl-transferase [Escherichia coli Xuzhou21]
gi|416314050|ref|ZP_11658508.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1044]
gi|416318952|ref|ZP_11661504.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC1212]
gi|416325842|ref|ZP_11666166.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1125]
gi|416777817|ref|ZP_11875457.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. G5101]
gi|416790006|ref|ZP_11880902.1| PII uridylyl-transferase [Escherichia coli O157:H- str. 493-89]
gi|416795821|ref|ZP_11883363.1| PII uridylyl-transferase [Escherichia coli O157:H- str. H 2687]
gi|416807850|ref|ZP_11888189.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. 3256-97]
gi|416818999|ref|ZP_11893069.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. USDA 5905]
gi|416828336|ref|ZP_11897935.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. LSU-61]
gi|419048381|ref|ZP_13595306.1| protein-P-II uridylyltransferase [Escherichia coli DEC3A]
gi|419048741|ref|ZP_13595662.1| protein-P-II uridylyltransferase [Escherichia coli DEC3B]
gi|419054817|ref|ZP_13601678.1| protein-P-II uridylyltransferase [Escherichia coli DEC3C]
gi|419060372|ref|ZP_13607160.1| protein-P-II uridylyltransferase [Escherichia coli DEC3D]
gi|419066204|ref|ZP_13612894.1| protein-P-II uridylyltransferase [Escherichia coli DEC3E]
gi|419073004|ref|ZP_13618580.1| protein-P-II uridylyltransferase [Escherichia coli DEC3F]
gi|419078439|ref|ZP_13623927.1| protein-P-II uridylyltransferase [Escherichia coli DEC4A]
gi|419084088|ref|ZP_13629507.1| protein-P-II uridylyltransferase [Escherichia coli DEC4B]
gi|419090146|ref|ZP_13635468.1| protein-P-II uridylyltransferase [Escherichia coli DEC4C]
gi|419101488|ref|ZP_13646669.1| protein-P-II uridylyltransferase [Escherichia coli DEC4D]
gi|419101726|ref|ZP_13646895.1| protein-P-II uridylyltransferase [Escherichia coli DEC4E]
gi|419112831|ref|ZP_13657869.1| protein-P-II uridylyltransferase [Escherichia coli DEC4F]
gi|419112988|ref|ZP_13658024.1| protein-P-II uridylyltransferase [Escherichia coli DEC5A]
gi|419118495|ref|ZP_13663483.1| protein-P-II uridylyltransferase [Escherichia coli DEC5B]
gi|419124056|ref|ZP_13668966.1| protein-P-II uridylyltransferase [Escherichia coli DEC5C]
gi|419129732|ref|ZP_13674589.1| protein-P-II uridylyltransferase [Escherichia coli DEC5D]
gi|420267202|ref|ZP_14769613.1| protein-P-II uridylyltransferase [Escherichia coli PA22]
gi|420273138|ref|ZP_14775473.1| protein-P-II uridylyltransferase [Escherichia coli PA40]
gi|420283589|ref|ZP_14785814.1| protein-P-II uridylyltransferase [Escherichia coli TW06591]
gi|420284494|ref|ZP_14786714.1| protein-P-II uridylyltransferase [Escherichia coli TW10246]
gi|420290188|ref|ZP_14792357.1| protein-P-II uridylyltransferase [Escherichia coli TW11039]
gi|420295910|ref|ZP_14798008.1| protein-P-II uridylyltransferase [Escherichia coli TW09109]
gi|420301646|ref|ZP_14803681.1| protein-P-II uridylyltransferase [Escherichia coli TW10119]
gi|420307199|ref|ZP_14809175.1| protein-P-II uridylyltransferase [Escherichia coli EC1738]
gi|420312798|ref|ZP_14814713.1| protein-P-II uridylyltransferase [Escherichia coli EC1734]
gi|421810312|ref|ZP_16246132.1| protein-P-II uridylyltransferase [Escherichia coli 8.0416]
gi|421816385|ref|ZP_16251958.1| protein-P-II uridylyltransferase [Escherichia coli 10.0821]
gi|421821778|ref|ZP_16257223.1| protein-P-II uridylyltransferase [Escherichia coli FRIK920]
gi|421828531|ref|ZP_16263863.1| protein-P-II uridylyltransferase [Escherichia coli PA7]
gi|423652531|ref|ZP_17627935.1| protein-P-II uridylyltransferase [Escherichia coli PA31]
gi|424074927|ref|ZP_17812319.1| protein-P-II uridylyltransferase [Escherichia coli FDA505]
gi|424081177|ref|ZP_17818084.1| protein-P-II uridylyltransferase [Escherichia coli FDA517]
gi|424087853|ref|ZP_17824155.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1996]
gi|424094063|ref|ZP_17829876.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1985]
gi|424100476|ref|ZP_17835685.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1990]
gi|424107301|ref|ZP_17841922.1| protein-P-II uridylyltransferase [Escherichia coli 93-001]
gi|424113274|ref|ZP_17847473.1| protein-P-II uridylyltransferase [Escherichia coli PA3]
gi|424119403|ref|ZP_17853162.1| protein-P-II uridylyltransferase [Escherichia coli PA5]
gi|424125620|ref|ZP_17858862.1| protein-P-II uridylyltransferase [Escherichia coli PA9]
gi|424131627|ref|ZP_17864483.1| protein-P-II uridylyltransferase [Escherichia coli PA10]
gi|424138240|ref|ZP_17870582.1| protein-P-II uridylyltransferase [Escherichia coli PA14]
gi|424144694|ref|ZP_17876502.1| protein-P-II uridylyltransferase [Escherichia coli PA15]
gi|424150840|ref|ZP_17882146.1| protein-P-II uridylyltransferase [Escherichia coli PA24]
gi|424260192|ref|ZP_17893128.1| protein-P-II uridylyltransferase [Escherichia coli PA25]
gi|424260877|ref|ZP_17893463.1| protein-P-II uridylyltransferase [Escherichia coli PA28]
gi|424417115|ref|ZP_17899235.1| protein-P-II uridylyltransferase [Escherichia coli PA32]
gi|424453238|ref|ZP_17904825.1| protein-P-II uridylyltransferase [Escherichia coli PA33]
gi|424459517|ref|ZP_17910525.1| protein-P-II uridylyltransferase [Escherichia coli PA39]
gi|424465979|ref|ZP_17916216.1| protein-P-II uridylyltransferase [Escherichia coli PA41]
gi|424472579|ref|ZP_17922291.1| protein-P-II uridylyltransferase [Escherichia coli PA42]
gi|424478549|ref|ZP_17927838.1| protein-P-II uridylyltransferase [Escherichia coli TW07945]
gi|424484575|ref|ZP_17933494.1| protein-P-II uridylyltransferase [Escherichia coli TW09098]
gi|424490668|ref|ZP_17939142.1| protein-P-II uridylyltransferase [Escherichia coli TW09195]
gi|424497789|ref|ZP_17945112.1| protein-P-II uridylyltransferase [Escherichia coli EC4203]
gi|424504035|ref|ZP_17950860.1| protein-P-II uridylyltransferase [Escherichia coli EC4196]
gi|424510277|ref|ZP_17956580.1| protein-P-II uridylyltransferase [Escherichia coli TW14313]
gi|424517858|ref|ZP_17962332.1| protein-P-II uridylyltransferase [Escherichia coli TW14301]
gi|424523686|ref|ZP_17967753.1| protein-P-II uridylyltransferase [Escherichia coli EC4421]
gi|424529892|ref|ZP_17973561.1| protein-P-II uridylyltransferase [Escherichia coli EC4422]
gi|424535863|ref|ZP_17979171.1| protein-P-II uridylyltransferase [Escherichia coli EC4013]
gi|424541751|ref|ZP_17984636.1| protein-P-II uridylyltransferase [Escherichia coli EC4402]
gi|424548076|ref|ZP_17990338.1| protein-P-II uridylyltransferase [Escherichia coli EC4439]
gi|424554365|ref|ZP_17996133.1| protein-P-II uridylyltransferase [Escherichia coli EC4436]
gi|424560711|ref|ZP_18002037.1| protein-P-II uridylyltransferase [Escherichia coli EC4437]
gi|424566721|ref|ZP_18007687.1| protein-P-II uridylyltransferase [Escherichia coli EC4448]
gi|424572919|ref|ZP_18013390.1| protein-P-II uridylyltransferase [Escherichia coli EC1845]
gi|424584747|ref|ZP_18024367.1| protein-P-II uridylyltransferase [Escherichia coli EC1863]
gi|425095561|ref|ZP_18498621.1| protein-P-II uridylyltransferase [Escherichia coli 3.4870]
gi|425101644|ref|ZP_18504332.1| protein-P-II uridylyltransferase [Escherichia coli 5.2239]
gi|425107502|ref|ZP_18509787.1| protein-P-II uridylyltransferase [Escherichia coli 6.0172]
gi|425123314|ref|ZP_18524929.1| protein-P-II uridylyltransferase [Escherichia coli 8.0586]
gi|425129340|ref|ZP_18530483.1| protein-P-II uridylyltransferase [Escherichia coli 8.2524]
gi|425135682|ref|ZP_18536451.1| protein-P-II uridylyltransferase [Escherichia coli 10.0833]
gi|425141628|ref|ZP_18541960.1| protein-P-II uridylyltransferase [Escherichia coli 10.0869]
gi|425147906|ref|ZP_18547843.1| protein-P-II uridylyltransferase [Escherichia coli 88.0221]
gi|425153520|ref|ZP_18553107.1| protein-P-II uridylyltransferase [Escherichia coli PA34]
gi|425159981|ref|ZP_18559191.1| protein-P-II uridylyltransferase [Escherichia coli FDA506]
gi|425165496|ref|ZP_18564339.1| protein-P-II uridylyltransferase [Escherichia coli FDA507]
gi|425171783|ref|ZP_18570220.1| protein-P-II uridylyltransferase [Escherichia coli FDA504]
gi|425177585|ref|ZP_18575672.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1999]
gi|425183809|ref|ZP_18581469.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1997]
gi|425190542|ref|ZP_18587701.1| protein-P-II uridylyltransferase [Escherichia coli NE1487]
gi|425196839|ref|ZP_18593531.1| protein-P-II uridylyltransferase [Escherichia coli NE037]
gi|425203537|ref|ZP_18599699.1| protein-P-II uridylyltransferase [Escherichia coli FRIK2001]
gi|425209312|ref|ZP_18605084.1| protein-P-II uridylyltransferase [Escherichia coli PA4]
gi|425215349|ref|ZP_18610703.1| protein-P-II uridylyltransferase [Escherichia coli PA23]
gi|425221916|ref|ZP_18616811.1| protein-P-II uridylyltransferase [Escherichia coli PA49]
gi|425228167|ref|ZP_18622599.1| protein-P-II uridylyltransferase [Escherichia coli PA45]
gi|425234467|ref|ZP_18628461.1| protein-P-II uridylyltransferase [Escherichia coli TT12B]
gi|425240444|ref|ZP_18634113.1| protein-P-II uridylyltransferase [Escherichia coli MA6]
gi|425246522|ref|ZP_18639761.1| protein-P-II uridylyltransferase [Escherichia coli 5905]
gi|425252312|ref|ZP_18645231.1| protein-P-II uridylyltransferase [Escherichia coli CB7326]
gi|425258646|ref|ZP_18651051.1| protein-P-II uridylyltransferase [Escherichia coli EC96038]
gi|425264761|ref|ZP_18656717.1| protein-P-II uridylyltransferase [Escherichia coli 5412]
gi|425292144|ref|ZP_18682782.1| protein-P-II uridylyltransferase [Escherichia coli PA38]
gi|425308922|ref|ZP_18698434.1| protein-P-II uridylyltransferase [Escherichia coli EC1735]
gi|425314850|ref|ZP_18703968.1| protein-P-II uridylyltransferase [Escherichia coli EC1736]
gi|425320927|ref|ZP_18709647.1| protein-P-II uridylyltransferase [Escherichia coli EC1737]
gi|425327087|ref|ZP_18715359.1| protein-P-II uridylyltransferase [Escherichia coli EC1846]
gi|425333276|ref|ZP_18721045.1| protein-P-II uridylyltransferase [Escherichia coli EC1847]
gi|425339695|ref|ZP_18726976.1| protein-P-II uridylyltransferase [Escherichia coli EC1848]
gi|425345573|ref|ZP_18732421.1| protein-P-II uridylyltransferase [Escherichia coli EC1849]
gi|425351789|ref|ZP_18738210.1| protein-P-II uridylyltransferase [Escherichia coli EC1850]
gi|425357774|ref|ZP_18743788.1| protein-P-II uridylyltransferase [Escherichia coli EC1856]
gi|425363888|ref|ZP_18749490.1| protein-P-II uridylyltransferase [Escherichia coli EC1862]
gi|425370323|ref|ZP_18755329.1| protein-P-II uridylyltransferase [Escherichia coli EC1864]
gi|425389175|ref|ZP_18772709.1| protein-P-II uridylyltransferase [Escherichia coli EC1866]
gi|425389820|ref|ZP_18773315.1| protein-P-II uridylyltransferase [Escherichia coli EC1868]
gi|425395943|ref|ZP_18779023.1| protein-P-II uridylyltransferase [Escherichia coli EC1869]
gi|425408099|ref|ZP_18790291.1| protein-P-II uridylyltransferase [Escherichia coli EC1870]
gi|425408474|ref|ZP_18790663.1| protein-P-II uridylyltransferase [Escherichia coli NE098]
gi|425414743|ref|ZP_18796414.1| protein-P-II uridylyltransferase [Escherichia coli FRIK523]
gi|425425892|ref|ZP_18806977.1| protein-P-II uridylyltransferase [Escherichia coli 0.1304]
gi|428944524|ref|ZP_19017216.1| protein-P-II uridylyltransferase [Escherichia coli 88.1467]
gi|428950698|ref|ZP_19022879.1| protein-P-II uridylyltransferase [Escherichia coli 88.1042]
gi|428956545|ref|ZP_19028293.1| protein-P-II uridylyltransferase [Escherichia coli 89.0511]
gi|428962912|ref|ZP_19034133.1| protein-P-II uridylyltransferase [Escherichia coli 90.0091]
gi|428968975|ref|ZP_19039642.1| protein-P-II uridylyltransferase [Escherichia coli 90.0039]
gi|428975386|ref|ZP_19045597.1| protein-P-II uridylyltransferase [Escherichia coli 90.2281]
gi|428981202|ref|ZP_19050973.1| protein-P-II uridylyltransferase [Escherichia coli 93.0055]
gi|428987500|ref|ZP_19056827.1| protein-P-II uridylyltransferase [Escherichia coli 93.0056]
gi|428993311|ref|ZP_19062255.1| protein-P-II uridylyltransferase [Escherichia coli 94.0618]
gi|428999401|ref|ZP_19067951.1| protein-P-II uridylyltransferase [Escherichia coli 95.0183]
gi|429005639|ref|ZP_19073608.1| protein-P-II uridylyltransferase [Escherichia coli 95.1288]
gi|429012001|ref|ZP_19079290.1| protein-P-II uridylyltransferase [Escherichia coli 95.0943]
gi|429018224|ref|ZP_19085040.1| protein-P-II uridylyltransferase [Escherichia coli 96.0428]
gi|429023882|ref|ZP_19090333.1| protein-P-II uridylyltransferase [Escherichia coli 96.0427]
gi|429030186|ref|ZP_19096095.1| protein-P-II uridylyltransferase [Escherichia coli 96.0939]
gi|429036339|ref|ZP_19101818.1| protein-P-II uridylyltransferase [Escherichia coli 96.0932]
gi|429042371|ref|ZP_19107409.1| protein-P-II uridylyltransferase [Escherichia coli 96.0107]
gi|429048143|ref|ZP_19112811.1| protein-P-II uridylyltransferase [Escherichia coli 97.0003]
gi|429053506|ref|ZP_19118022.1| protein-P-II uridylyltransferase [Escherichia coli 97.1742]
gi|429059207|ref|ZP_19123377.1| protein-P-II uridylyltransferase [Escherichia coli 97.0007]
gi|429071207|ref|ZP_19134575.1| protein-P-II uridylyltransferase [Escherichia coli 99.0678]
gi|429076437|ref|ZP_19139667.1| protein-P-II uridylyltransferase [Escherichia coli 99.0713]
gi|429823649|ref|ZP_19355206.1| protein-P-II uridylyltransferase [Escherichia coli 96.0109]
gi|429830020|ref|ZP_19360937.1| protein-P-II uridylyltransferase [Escherichia coli 97.0010]
gi|444922365|ref|ZP_21242129.1| protein-P-II uridylyltransferase [Escherichia coli 09BKT078844]
gi|444928682|ref|ZP_21247854.1| protein-P-II uridylyltransferase [Escherichia coli 99.0814]
gi|444934081|ref|ZP_21253045.1| protein-P-II uridylyltransferase [Escherichia coli 99.0815]
gi|444939649|ref|ZP_21258319.1| protein-P-II uridylyltransferase [Escherichia coli 99.0816]
gi|444945199|ref|ZP_21263637.1| protein-P-II uridylyltransferase [Escherichia coli 99.0839]
gi|444950772|ref|ZP_21269016.1| protein-P-II uridylyltransferase [Escherichia coli 99.0848]
gi|444956246|ref|ZP_21274270.1| protein-P-II uridylyltransferase [Escherichia coli 99.1753]
gi|444961561|ref|ZP_21279334.1| protein-P-II uridylyltransferase [Escherichia coli 99.1775]
gi|444967308|ref|ZP_21284794.1| protein-P-II uridylyltransferase [Escherichia coli 99.1793]
gi|444972814|ref|ZP_21290118.1| protein-P-II uridylyltransferase [Escherichia coli 99.1805]
gi|444988886|ref|ZP_21305637.1| protein-P-II uridylyltransferase [Escherichia coli PA19]
gi|444994199|ref|ZP_21310810.1| protein-P-II uridylyltransferase [Escherichia coli PA13]
gi|444999715|ref|ZP_21316190.1| protein-P-II uridylyltransferase [Escherichia coli PA2]
gi|445005176|ref|ZP_21321530.1| protein-P-II uridylyltransferase [Escherichia coli PA47]
gi|445010355|ref|ZP_21326561.1| protein-P-II uridylyltransferase [Escherichia coli PA48]
gi|445016118|ref|ZP_21332179.1| protein-P-II uridylyltransferase [Escherichia coli PA8]
gi|445021590|ref|ZP_21337524.1| protein-P-II uridylyltransferase [Escherichia coli 7.1982]
gi|445026833|ref|ZP_21342622.1| protein-P-II uridylyltransferase [Escherichia coli 99.1781]
gi|445032307|ref|ZP_21347945.1| protein-P-II uridylyltransferase [Escherichia coli 99.1762]
gi|445038003|ref|ZP_21353486.1| protein-P-II uridylyltransferase [Escherichia coli PA35]
gi|445043174|ref|ZP_21358523.1| protein-P-II uridylyltransferase [Escherichia coli 3.4880]
gi|445048826|ref|ZP_21364009.1| protein-P-II uridylyltransferase [Escherichia coli 95.0083]
gi|445054446|ref|ZP_21369408.1| protein-P-II uridylyltransferase [Escherichia coli 99.0670]
gi|452969988|ref|ZP_21968215.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4009]
gi|21362567|sp|Q8X8Y6.1|GLND_ECO57 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238057815|sp|B5Z0E5.1|GLND_ECO5E RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|12512889|gb|AAG54469.1|AE005192_11 protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli O157:H7 str. EDL933]
gi|13359625|dbj|BAB33592.1| protein PII-uridylyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|187767697|gb|EDU31541.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|188014575|gb|EDU52697.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|189000436|gb|EDU69422.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|189357031|gb|EDU75450.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|189360712|gb|EDU79131.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|189365647|gb|EDU84063.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|189371115|gb|EDU89531.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|189375685|gb|EDU94101.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|208727403|gb|EDZ77004.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208735444|gb|EDZ84131.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208739221|gb|EDZ86903.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209160951|gb|ACI38384.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|209745874|gb|ACI71244.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745876|gb|ACI71245.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745878|gb|ACI71246.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745880|gb|ACI71247.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745882|gb|ACI71248.1| protein PII-uridylyltransferase [Escherichia coli]
gi|217322096|gb|EEC30520.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254590700|gb|ACT70061.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. TW14359]
gi|320190308|gb|EFW64958.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC1212]
gi|320639973|gb|EFX09558.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. G5101]
gi|320644743|gb|EFX13787.1| PII uridylyl-transferase [Escherichia coli O157:H- str. 493-89]
gi|320652899|gb|EFX21137.1| PII uridylyl-transferase [Escherichia coli O157:H- str. H 2687]
gi|320658287|gb|EFX26016.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320663597|gb|EFX30881.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. USDA 5905]
gi|320668910|gb|EFX35705.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. LSU-61]
gi|326339779|gb|EGD63587.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1044]
gi|326345114|gb|EGD68857.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1125]
gi|374357088|gb|AEZ38795.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. RM12579]
gi|377887402|gb|EHU51879.1| protein-P-II uridylyltransferase [Escherichia coli DEC3A]
gi|377902935|gb|EHU67234.1| protein-P-II uridylyltransferase [Escherichia coli DEC3B]
gi|377915444|gb|EHU79553.1| protein-P-II uridylyltransferase [Escherichia coli DEC3C]
gi|377919721|gb|EHU83759.1| protein-P-II uridylyltransferase [Escherichia coli DEC3D]
gi|377921265|gb|EHU85265.1| protein-P-II uridylyltransferase [Escherichia coli DEC3E]
gi|377933579|gb|EHU97423.1| protein-P-II uridylyltransferase [Escherichia coli DEC3F]
gi|377934957|gb|EHU98782.1| protein-P-II uridylyltransferase [Escherichia coli DEC4A]
gi|377936044|gb|EHU99838.1| protein-P-II uridylyltransferase [Escherichia coli DEC4D]
gi|377941318|gb|EHV05060.1| protein-P-II uridylyltransferase [Escherichia coli DEC4B]
gi|377950853|gb|EHV14474.1| protein-P-II uridylyltransferase [Escherichia coli DEC4C]
gi|377951904|gb|EHV15512.1| protein-P-II uridylyltransferase [Escherichia coli DEC4F]
gi|377955947|gb|EHV19499.1| protein-P-II uridylyltransferase [Escherichia coli DEC4E]
gi|377966841|gb|EHV30251.1| protein-P-II uridylyltransferase [Escherichia coli DEC5A]
gi|377974726|gb|EHV38053.1| protein-P-II uridylyltransferase [Escherichia coli DEC5B]
gi|377982977|gb|EHV46227.1| protein-P-II uridylyltransferase [Escherichia coli DEC5D]
gi|377983775|gb|EHV47017.1| protein-P-II uridylyltransferase [Escherichia coli DEC5C]
gi|386794183|gb|AFJ27217.1| PII uridylyl-transferase [Escherichia coli Xuzhou21]
gi|390651635|gb|EIN29906.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1996]
gi|390654242|gb|EIN32295.1| protein-P-II uridylyltransferase [Escherichia coli FDA517]
gi|390654536|gb|EIN32582.1| protein-P-II uridylyltransferase [Escherichia coli FDA505]
gi|390670999|gb|EIN47487.1| protein-P-II uridylyltransferase [Escherichia coli 93-001]
gi|390674921|gb|EIN51086.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1990]
gi|390676333|gb|EIN52439.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1985]
gi|390690037|gb|EIN64939.1| protein-P-II uridylyltransferase [Escherichia coli PA3]
gi|390693832|gb|EIN68449.1| protein-P-II uridylyltransferase [Escherichia coli PA9]
gi|390694794|gb|EIN69352.1| protein-P-II uridylyltransferase [Escherichia coli PA5]
gi|390709617|gb|EIN82699.1| protein-P-II uridylyltransferase [Escherichia coli PA10]
gi|390712068|gb|EIN85026.1| protein-P-II uridylyltransferase [Escherichia coli PA15]
gi|390715192|gb|EIN88059.1| protein-P-II uridylyltransferase [Escherichia coli PA14]
gi|390716663|gb|EIN89458.1| protein-P-II uridylyltransferase [Escherichia coli PA25]
gi|390721591|gb|EIN94285.1| protein-P-II uridylyltransferase [Escherichia coli PA22]
gi|390734882|gb|EIO06311.1| protein-P-II uridylyltransferase [Escherichia coli PA24]
gi|390738332|gb|EIO09550.1| protein-P-II uridylyltransferase [Escherichia coli PA28]
gi|390753226|gb|EIO22949.1| protein-P-II uridylyltransferase [Escherichia coli PA31]
gi|390753625|gb|EIO23302.1| protein-P-II uridylyltransferase [Escherichia coli PA32]
gi|390758169|gb|EIO27637.1| protein-P-II uridylyltransferase [Escherichia coli PA33]
gi|390763427|gb|EIO32676.1| protein-P-II uridylyltransferase [Escherichia coli PA40]
gi|390777307|gb|EIO45151.1| protein-P-II uridylyltransferase [Escherichia coli PA41]
gi|390778256|gb|EIO46014.1| protein-P-II uridylyltransferase [Escherichia coli TW06591]
gi|390781190|gb|EIO48874.1| protein-P-II uridylyltransferase [Escherichia coli PA42]
gi|390788086|gb|EIO55556.1| protein-P-II uridylyltransferase [Escherichia coli PA39]
gi|390796282|gb|EIO63558.1| protein-P-II uridylyltransferase [Escherichia coli TW10246]
gi|390802914|gb|EIO69943.1| protein-P-II uridylyltransferase [Escherichia coli TW11039]
gi|390812279|gb|EIO78962.1| protein-P-II uridylyltransferase [Escherichia coli TW07945]
gi|390812708|gb|EIO79384.1| protein-P-II uridylyltransferase [Escherichia coli TW09109]
gi|390820239|gb|EIO86545.1| protein-P-II uridylyltransferase [Escherichia coli TW10119]
gi|390824961|gb|EIO90910.1| protein-P-II uridylyltransferase [Escherichia coli TW09098]
gi|390838045|gb|EIP02363.1| protein-P-II uridylyltransferase [Escherichia coli EC4203]
gi|390841069|gb|EIP05040.1| protein-P-II uridylyltransferase [Escherichia coli EC4196]
gi|390845173|gb|EIP08851.1| protein-P-II uridylyltransferase [Escherichia coli TW09195]
gi|390856528|gb|EIP19108.1| protein-P-II uridylyltransferase [Escherichia coli TW14301]
gi|390861560|gb|EIP23808.1| protein-P-II uridylyltransferase [Escherichia coli EC4421]
gi|390862622|gb|EIP24797.1| protein-P-II uridylyltransferase [Escherichia coli TW14313]
gi|390872591|gb|EIP33880.1| protein-P-II uridylyltransferase [Escherichia coli EC4422]
gi|390877801|gb|EIP38696.1| protein-P-II uridylyltransferase [Escherichia coli EC4013]
gi|390887310|gb|EIP47294.1| protein-P-II uridylyltransferase [Escherichia coli EC4402]
gi|390888990|gb|EIP48772.1| protein-P-II uridylyltransferase [Escherichia coli EC4439]
gi|390896384|gb|EIP55774.1| protein-P-II uridylyltransferase [Escherichia coli EC4436]
gi|390904305|gb|EIP63301.1| protein-P-II uridylyltransferase [Escherichia coli EC1738]
gi|390912550|gb|EIP71202.1| protein-P-II uridylyltransferase [Escherichia coli EC4437]
gi|390912650|gb|EIP71296.1| protein-P-II uridylyltransferase [Escherichia coli EC1734]
gi|390914290|gb|EIP72834.1| protein-P-II uridylyltransferase [Escherichia coli EC1863]
gi|390917730|gb|EIP76147.1| protein-P-II uridylyltransferase [Escherichia coli EC4448]
gi|390926737|gb|EIP84296.1| protein-P-II uridylyltransferase [Escherichia coli EC1845]
gi|408073657|gb|EKH07966.1| protein-P-II uridylyltransferase [Escherichia coli PA7]
gi|408077392|gb|EKH11600.1| protein-P-II uridylyltransferase [Escherichia coli FRIK920]
gi|408087405|gb|EKH20854.1| protein-P-II uridylyltransferase [Escherichia coli PA34]
gi|408092009|gb|EKH25208.1| protein-P-II uridylyltransferase [Escherichia coli FDA506]
gi|408097749|gb|EKH30632.1| protein-P-II uridylyltransferase [Escherichia coli FDA507]
gi|408103931|gb|EKH36260.1| protein-P-II uridylyltransferase [Escherichia coli FDA504]
gi|408111360|gb|EKH43111.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1999]
gi|408117467|gb|EKH48652.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1997]
gi|408123163|gb|EKH53965.1| protein-P-II uridylyltransferase [Escherichia coli NE1487]
gi|408131280|gb|EKH61322.1| protein-P-II uridylyltransferase [Escherichia coli NE037]
gi|408133082|gb|EKH62999.1| protein-P-II uridylyltransferase [Escherichia coli FRIK2001]
gi|408142179|gb|EKH71560.1| protein-P-II uridylyltransferase [Escherichia coli PA4]
gi|408151000|gb|EKH79518.1| protein-P-II uridylyltransferase [Escherichia coli PA23]
gi|408154563|gb|EKH82894.1| protein-P-II uridylyltransferase [Escherichia coli PA49]
gi|408159791|gb|EKH87843.1| protein-P-II uridylyltransferase [Escherichia coli PA45]
gi|408168055|gb|EKH95508.1| protein-P-II uridylyltransferase [Escherichia coli TT12B]
gi|408173843|gb|EKI00846.1| protein-P-II uridylyltransferase [Escherichia coli MA6]
gi|408175504|gb|EKI02406.1| protein-P-II uridylyltransferase [Escherichia coli 5905]
gi|408188031|gb|EKI13920.1| protein-P-II uridylyltransferase [Escherichia coli CB7326]
gi|408193763|gb|EKI19281.1| protein-P-II uridylyltransferase [Escherichia coli 5412]
gi|408194083|gb|EKI19583.1| protein-P-II uridylyltransferase [Escherichia coli EC96038]
gi|408234524|gb|EKI57537.1| protein-P-II uridylyltransferase [Escherichia coli PA38]
gi|408240846|gb|EKI63497.1| protein-P-II uridylyltransferase [Escherichia coli EC1735]
gi|408250307|gb|EKI72167.1| protein-P-II uridylyltransferase [Escherichia coli EC1736]
gi|408254650|gb|EKI76153.1| protein-P-II uridylyltransferase [Escherichia coli EC1737]
gi|408260953|gb|EKI82002.1| protein-P-II uridylyltransferase [Escherichia coli EC1846]
gi|408269563|gb|EKI89808.1| protein-P-II uridylyltransferase [Escherichia coli EC1847]
gi|408271476|gb|EKI91603.1| protein-P-II uridylyltransferase [Escherichia coli EC1848]
gi|408280437|gb|EKI99989.1| protein-P-II uridylyltransferase [Escherichia coli EC1849]
gi|408286292|gb|EKJ05220.1| protein-P-II uridylyltransferase [Escherichia coli EC1850]
gi|408289580|gb|EKJ08338.1| protein-P-II uridylyltransferase [Escherichia coli EC1856]
gi|408301855|gb|EKJ19416.1| protein-P-II uridylyltransferase [Escherichia coli EC1862]
gi|408302059|gb|EKJ19608.1| protein-P-II uridylyltransferase [Escherichia coli EC1864]
gi|408303283|gb|EKJ20749.1| protein-P-II uridylyltransferase [Escherichia coli EC1866]
gi|408319622|gb|EKJ35744.1| protein-P-II uridylyltransferase [Escherichia coli EC1868]
gi|408320284|gb|EKJ36387.1| protein-P-II uridylyltransferase [Escherichia coli EC1870]
gi|408332525|gb|EKJ47560.1| protein-P-II uridylyltransferase [Escherichia coli EC1869]
gi|408338451|gb|EKJ53099.1| protein-P-II uridylyltransferase [Escherichia coli NE098]
gi|408351201|gb|EKJ64992.1| protein-P-II uridylyltransferase [Escherichia coli FRIK523]
gi|408353692|gb|EKJ67187.1| protein-P-II uridylyltransferase [Escherichia coli 0.1304]
gi|408560616|gb|EKK36879.1| protein-P-II uridylyltransferase [Escherichia coli 5.2239]
gi|408560969|gb|EKK37217.1| protein-P-II uridylyltransferase [Escherichia coli 3.4870]
gi|408561585|gb|EKK37788.1| protein-P-II uridylyltransferase [Escherichia coli 6.0172]
gi|408586234|gb|EKK61017.1| protein-P-II uridylyltransferase [Escherichia coli 8.0586]
gi|408592166|gb|EKK66559.1| protein-P-II uridylyltransferase [Escherichia coli 8.2524]
gi|408593917|gb|EKK68225.1| protein-P-II uridylyltransferase [Escherichia coli 10.0833]
gi|408605669|gb|EKK79163.1| protein-P-II uridylyltransferase [Escherichia coli 10.0869]
gi|408606378|gb|EKK79825.1| protein-P-II uridylyltransferase [Escherichia coli 8.0416]
gi|408613536|gb|EKK86824.1| protein-P-II uridylyltransferase [Escherichia coli 88.0221]
gi|408618379|gb|EKK91466.1| protein-P-II uridylyltransferase [Escherichia coli 10.0821]
gi|427215872|gb|EKV85038.1| protein-P-II uridylyltransferase [Escherichia coli 88.1042]
gi|427219314|gb|EKV88283.1| protein-P-II uridylyltransferase [Escherichia coli 89.0511]
gi|427219563|gb|EKV88525.1| protein-P-II uridylyltransferase [Escherichia coli 88.1467]
gi|427235292|gb|EKW02914.1| protein-P-II uridylyltransferase [Escherichia coli 90.0039]
gi|427235357|gb|EKW02978.1| protein-P-II uridylyltransferase [Escherichia coli 90.2281]
gi|427238019|gb|EKW05541.1| protein-P-II uridylyltransferase [Escherichia coli 90.0091]
gi|427252399|gb|EKW18888.1| protein-P-II uridylyltransferase [Escherichia coli 93.0056]
gi|427254222|gb|EKW20590.1| protein-P-II uridylyltransferase [Escherichia coli 93.0055]
gi|427255280|gb|EKW21551.1| protein-P-II uridylyltransferase [Escherichia coli 94.0618]
gi|427271746|gb|EKW36537.1| protein-P-II uridylyltransferase [Escherichia coli 95.0943]
gi|427272295|gb|EKW37048.1| protein-P-II uridylyltransferase [Escherichia coli 95.0183]
gi|427278543|gb|EKW43000.1| protein-P-II uridylyltransferase [Escherichia coli 95.1288]
gi|427287297|gb|EKW51065.1| protein-P-II uridylyltransferase [Escherichia coli 96.0428]
gi|427293426|gb|EKW56680.1| protein-P-II uridylyltransferase [Escherichia coli 96.0427]
gi|427295005|gb|EKW58159.1| protein-P-II uridylyltransferase [Escherichia coli 96.0939]
gi|427305704|gb|EKW68298.1| protein-P-II uridylyltransferase [Escherichia coli 97.0003]
gi|427307887|gb|EKW70311.1| protein-P-II uridylyltransferase [Escherichia coli 96.0932]
gi|427312425|gb|EKW74581.1| protein-P-II uridylyltransferase [Escherichia coli 96.0107]
gi|427322870|gb|EKW84491.1| protein-P-II uridylyltransferase [Escherichia coli 97.1742]
gi|427323590|gb|EKW85151.1| protein-P-II uridylyltransferase [Escherichia coli 97.0007]
gi|427335512|gb|EKW96542.1| protein-P-II uridylyltransferase [Escherichia coli 99.0713]
gi|427335913|gb|EKW96942.1| protein-P-II uridylyltransferase [Escherichia coli 99.0678]
gi|429260852|gb|EKY44383.1| protein-P-II uridylyltransferase [Escherichia coli 96.0109]
gi|429262277|gb|EKY45620.1| protein-P-II uridylyltransferase [Escherichia coli 97.0010]
gi|444543492|gb|ELV22754.1| protein-P-II uridylyltransferase [Escherichia coli 99.0814]
gi|444552195|gb|ELV30038.1| protein-P-II uridylyltransferase [Escherichia coli 09BKT078844]
gi|444552585|gb|ELV30372.1| protein-P-II uridylyltransferase [Escherichia coli 99.0815]
gi|444566164|gb|ELV43000.1| protein-P-II uridylyltransferase [Escherichia coli 99.0839]
gi|444568464|gb|ELV45139.1| protein-P-II uridylyltransferase [Escherichia coli 99.0816]
gi|444573014|gb|ELV49415.1| protein-P-II uridylyltransferase [Escherichia coli 99.0848]
gi|444583654|gb|ELV59350.1| protein-P-II uridylyltransferase [Escherichia coli 99.1753]
gi|444586558|gb|ELV62056.1| protein-P-II uridylyltransferase [Escherichia coli 99.1775]
gi|444587278|gb|ELV62748.1| protein-P-II uridylyltransferase [Escherichia coli 99.1793]
gi|444610051|gb|ELV84487.1| protein-P-II uridylyltransferase [Escherichia coli 99.1805]
gi|444616172|gb|ELV90342.1| protein-P-II uridylyltransferase [Escherichia coli PA13]
gi|444616580|gb|ELV90742.1| protein-P-II uridylyltransferase [Escherichia coli PA19]
gi|444625216|gb|ELV99087.1| protein-P-II uridylyltransferase [Escherichia coli PA2]
gi|444633759|gb|ELW07262.1| protein-P-II uridylyltransferase [Escherichia coli PA48]
gi|444634084|gb|ELW07575.1| protein-P-II uridylyltransferase [Escherichia coli PA47]
gi|444639386|gb|ELW12705.1| protein-P-II uridylyltransferase [Escherichia coli PA8]
gi|444649181|gb|ELW22087.1| protein-P-II uridylyltransferase [Escherichia coli 7.1982]
gi|444651343|gb|ELW24152.1| protein-P-II uridylyltransferase [Escherichia coli 99.1781]
gi|444655369|gb|ELW27988.1| protein-P-II uridylyltransferase [Escherichia coli 99.1762]
gi|444664547|gb|ELW36735.1| protein-P-II uridylyltransferase [Escherichia coli PA35]
gi|444668830|gb|ELW40830.1| protein-P-II uridylyltransferase [Escherichia coli 3.4880]
gi|444673729|gb|ELW45355.1| protein-P-II uridylyltransferase [Escherichia coli 95.0083]
gi|444675171|gb|ELW46652.1| protein-P-II uridylyltransferase [Escherichia coli 99.0670]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|24111602|ref|NP_706112.1| PII uridylyl-transferase [Shigella flexneri 2a str. 301]
gi|30061724|ref|NP_835895.1| PII uridylyl-transferase [Shigella flexneri 2a str. 2457T]
gi|384541737|ref|YP_005725798.1| uridylyltransferase [Shigella flexneri 2002017]
gi|415859696|ref|ZP_11533895.1| protein-P-II uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|417699829|ref|ZP_12348977.1| protein-P-II uridylyltransferase [Shigella flexneri K-218]
gi|417705659|ref|ZP_12354734.1| protein-P-II uridylyltransferase [Shigella flexneri VA-6]
gi|417721147|ref|ZP_12370001.1| protein-P-II uridylyltransferase [Shigella flexneri K-304]
gi|417726512|ref|ZP_12375262.1| protein-P-II uridylyltransferase [Shigella flexneri K-671]
gi|417731647|ref|ZP_12380321.1| protein-P-II uridylyltransferase [Shigella flexneri 2747-71]
gi|417737000|ref|ZP_12385613.1| protein-P-II uridylyltransferase [Shigella flexneri 4343-70]
gi|417741650|ref|ZP_12390206.1| protein-P-II uridylyltransferase [Shigella flexneri 2930-71]
gi|417826180|ref|ZP_12472762.1| protein-P-II uridylyltransferase [Shigella flexneri J1713]
gi|420318640|ref|ZP_14820500.1| protein-P-II uridylyltransferase [Shigella flexneri 2850-71]
gi|420329325|ref|ZP_14831042.1| protein-P-II uridylyltransferase [Shigella flexneri K-1770]
gi|420339634|ref|ZP_14841171.1| protein-P-II uridylyltransferase [Shigella flexneri K-404]
gi|52000967|sp|Q83MD4.1|GLND_SHIFL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24050368|gb|AAN41819.1| PII-uridylyltransferase [Shigella flexneri 2a str. 301]
gi|30039966|gb|AAP15700.1| PII-uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|281599521|gb|ADA72505.1| uridylyltransferase [Shigella flexneri 2002017]
gi|313646774|gb|EFS11233.1| protein-P-II uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|332762039|gb|EGJ92310.1| protein-P-II uridylyltransferase [Shigella flexneri 2747-71]
gi|332762169|gb|EGJ92438.1| protein-P-II uridylyltransferase [Shigella flexneri 4343-70]
gi|332765013|gb|EGJ95241.1| protein-P-II uridylyltransferase [Shigella flexneri K-671]
gi|332768668|gb|EGJ98848.1| protein-P-II uridylyltransferase [Shigella flexneri 2930-71]
gi|333009087|gb|EGK28543.1| protein-P-II uridylyltransferase [Shigella flexneri K-218]
gi|333010660|gb|EGK30093.1| protein-P-II uridylyltransferase [Shigella flexneri VA-6]
gi|333022204|gb|EGK41443.1| protein-P-II uridylyltransferase [Shigella flexneri K-304]
gi|335578367|gb|EGM63585.1| protein-P-II uridylyltransferase [Shigella flexneri J1713]
gi|391255483|gb|EIQ14631.1| protein-P-II uridylyltransferase [Shigella flexneri 2850-71]
gi|391260951|gb|EIQ20001.1| protein-P-II uridylyltransferase [Shigella flexneri K-1770]
gi|391275177|gb|EIQ33970.1| protein-P-II uridylyltransferase [Shigella flexneri K-404]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|421595977|ref|ZP_16039900.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271916|gb|EJZ35673.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 534
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I+ P
Sbjct: 453 YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPT 511
Query: 185 TLAKIKRLLLYVLKGDRDKRSA 206
A IK L +V+ GD+ + A
Sbjct: 512 RQAAIKSALTHVMAGDKAVQPA 533
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 441 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 500
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 501 DLLGAQINAPTRQAAIKSAL 520
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T ++
Sbjct: 456 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQAA 515
Query: 400 RKEIGLTILRVKDDA 414
K LT + D A
Sbjct: 516 IKS-ALTHVMAGDKA 529
>gi|418252904|ref|ZP_12878326.1| protein-P-II uridylyltransferase [Shigella flexneri 6603-63]
gi|397901971|gb|EJL18307.1| protein-P-II uridylyltransferase [Shigella flexneri 6603-63]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|415814269|ref|ZP_11505889.1| protein-P-II uridylyltransferase [Escherichia coli LT-68]
gi|323170957|gb|EFZ56606.1| protein-P-II uridylyltransferase [Escherichia coli LT-68]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|422783064|ref|ZP_16835848.1| protein-P-II uridylyltransferase [Escherichia coli TW10509]
gi|323975666|gb|EGB70762.1| protein-P-II uridylyltransferase [Escherichia coli TW10509]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|110804219|ref|YP_687739.1| PII uridylyl-transferase [Shigella flexneri 5 str. 8401]
gi|424836686|ref|ZP_18261323.1| PII uridylyl-transferase [Shigella flexneri 5a str. M90T]
gi|123343151|sp|Q0T842.1|GLND_SHIF8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|110613767|gb|ABF02434.1| protein PII [Shigella flexneri 5 str. 8401]
gi|383465738|gb|EID60759.1| PII uridylyl-transferase [Shigella flexneri 5a str. M90T]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|386287193|ref|ZP_10064368.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
gi|385279725|gb|EIF43662.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
Length = 889
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHVTDQNGNKLSED- 93
AT I V + K G L + L LDL I+ A I + G + +D F+V +G + ++
Sbjct: 699 ATQIFVHTKAKLGLFALLAEALEQLDLSIQDARIYNSGTGYTLDTFYVLGADGESIGDNP 758
Query: 94 ----DVSERIQQSL-------------GPRARSFRSL--RRSVGVQAALEHTTIELTGRD 134
+ E +Q+ L PR S+ R S+ HT +E+ D
Sbjct: 759 SRIAHIIEFMQEHLEHPERFPATIERRTPRQMRLFSIPTRTSMATDLNKGHTVLEVITPD 818
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKR 191
RPGLL+ + + + + A++ T R+ V +IT E PIDDP +I++
Sbjct: 819 RPGLLARLARIFNQYDIRLQNAKIATLGERVEDVFFITDE-NQRPIDDPKLCEEIQQ 874
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 47/81 (58%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P R ++ N+ T+++V + ++ G L L ++ N D+ ++ A I++ GE DVF +
Sbjct: 796 PTRTSMATDLNKGHTVLEVITPDRPGLLARLARIFNQYDIRLQNAKIATLGERVEDVFFI 855
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD+N + + + E IQQ++
Sbjct: 856 TDENQRPIDDPKLCEEIQQAI 876
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 293 IAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISL-------ELCCE 345
IA E QE+ + H + P + E R + +I RTS L E+
Sbjct: 761 IAHIIEFMQEH-LEHPERFPATIERRTPRQMRLF--SIPTRTSMATDLNKGHTVLEVITP 817
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLL+ + RIF + + + A++ T G + +VF++ D + P+ + +EI
Sbjct: 818 DRPGLLARLARIFNQYDIRLQNAKIATLGERVEDVFFITDENQRPIDD---PKLCEEIQQ 874
Query: 406 TILRVKDDAYSKSP 419
I R D+ S P
Sbjct: 875 AICRELDEKASSKP 888
>gi|170683624|ref|YP_001742294.1| PII uridylyl-transferase [Escherichia coli SMS-3-5]
gi|226723944|sp|B1LGW8.1|GLND_ECOSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|170521342|gb|ACB19520.1| protein-P-II uridylyltransferase [Escherichia coli SMS-3-5]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|301025953|ref|ZP_07189437.1| protein-P-II uridylyltransferase [Escherichia coli MS 69-1]
gi|419918944|ref|ZP_14437116.1| PII uridylyl-transferase [Escherichia coli KD2]
gi|432546483|ref|ZP_19783295.1| [protein-PII] uridylyltransferase [Escherichia coli KTE236]
gi|432546888|ref|ZP_19783688.1| [protein-PII] uridylyltransferase [Escherichia coli KTE237]
gi|432625132|ref|ZP_19861131.1| [protein-PII] uridylyltransferase [Escherichia coli KTE76]
gi|300395752|gb|EFJ79290.1| protein-P-II uridylyltransferase [Escherichia coli MS 69-1]
gi|388389015|gb|EIL50558.1| PII uridylyl-transferase [Escherichia coli KD2]
gi|431068265|gb|ELD76770.1| [protein-PII] uridylyltransferase [Escherichia coli KTE236]
gi|431086700|gb|ELD92722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE237]
gi|431153198|gb|ELE54117.1| [protein-PII] uridylyltransferase [Escherichia coli KTE76]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|444978323|ref|ZP_21295331.1| protein-P-II uridylyltransferase [Escherichia coli ATCC 700728]
gi|444601109|gb|ELV75918.1| protein-P-II uridylyltransferase [Escherichia coli ATCC 700728]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|261751472|ref|ZP_05995181.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
gi|261741225|gb|EEY29151.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
Length = 935
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 835 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 894
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 895 DLVGHKISNATRQGNIKRKL 914
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 848 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 906
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 907 QGNIKRKLLALLGAENGART 926
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 856 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 915
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 916 ALLGAENGARTNGRSPQAAA 935
>gi|217978933|ref|YP_002363080.1| PII uridylyl-transferase [Methylocella silvestris BL2]
gi|217504309|gb|ACK51718.1| UTP-GlnB uridylyltransferase, GlnD [Methylocella silvestris BL2]
Length = 937
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+DN+ + + T+++V ++ G L +L +++LDL I A+I++ GE DVF+V+
Sbjct: 840 PEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVS 899
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++E E +++ +
Sbjct: 900 DNEGTKITEPVRQEAVRRKI 919
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
Query: 93 DDVSERIQQSLGPRARSFRSLRRSVGVQAALEH--TTIELTGRDRPGLLSEVFAVLSDLK 150
D V+ R+ S G R ++F+ + V + +L + T +E++G DRPGLL ++ +S+L
Sbjct: 820 DMVAARVG-SAGARQKTFK-VHPEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELD 877
Query: 151 CNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL---KGDRDKRSA 206
N+ A + T + A V Y+ S+ G I +P ++R +L++ KG+ +SA
Sbjct: 878 LNIGSAHIATFGEKAADVFYV-SDNEGTKITEPVRQEAVRRKILHIFDQPKGESAPKSA 935
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D P LLS + + N++ A+V+T MA + S D D
Sbjct: 741 TELTVIAPDSPHLLSIIAGACAASSANIVDAQVFTTTDGMALDTIVVSREFDF---DEDE 797
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L + R+ V A++ + T DM A GSA R
Sbjct: 798 LRRASRIAFAV----------ENALAGEITLT--------------DMVAARVGSAGARQ 833
Query: 246 K-----PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
K P VT+++ +TVV + DRP LLFD ++++ + A + +A
Sbjct: 834 KTFKVHPEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAA 893
Query: 301 QEYYIRHVDGN----PISSEAERQRVINCLE 327
+Y+ +G P+ EA R+++++ +
Sbjct: 894 DVFYVSDNEGTKITEPVRQEAVRRKILHIFD 924
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL D+T E L++ A + T G +A +VFYV D G + E V
Sbjct: 855 VEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVSDNEGTKIT----EPV 910
Query: 400 RKE-IGLTILRVKDDAYSKSPPQES 423
R+E + IL + D +S P+ +
Sbjct: 911 RQEAVRRKILHIFDQPKGESAPKSA 935
>gi|31789388|gb|AAP58504.1| putative PII uridylyltransferase [uncultured Acidobacteria
bacterium]
Length = 938
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 106 RARSFRSLRRSVGVQAALEH--TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS 163
R R+F +L +V + H T +E+TG DR GLL E+ A LS L N+ A V T
Sbjct: 835 RIRAF-ALEPTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGE 893
Query: 164 RMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTA 209
R+ V Y+T + G I P A IKR L+ + G ++ A A
Sbjct: 894 RVIDVFYVT-DLLGAQITSPTRQAAIKRALIALFAGPNNESKAAKA 938
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+++V ++ G L EL L+ L+L I A++++ GE +DVF+VT
Sbjct: 843 PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVT 902
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 903 DLLGAQITSPTRQAAIKRAL 922
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 47/218 (21%)
Query: 124 EHTTIELT--GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA-SVVYITSEATGLPI 180
EH ELT D P LLS + + N++GA++ T MA + I+ E
Sbjct: 741 EHGVTELTVYAPDHPRLLSAIAGACAVTGANIVGAQIHTTTDGMALDTISISRE------ 794
Query: 181 DDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHK-ERRLHQMMYADRDYDMNYAESG 239
+ + D ++R+A A S+++ + RL +++ A+ G
Sbjct: 795 --------------FERQEDEERRAARVAESIETALRGSLRLPEVV----------AKRG 830
Query: 240 SASGRSK-----PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
GR + P VT+ + YT+V + DR LL++ TL+ + + A V
Sbjct: 831 VPKGRIRAFALEPTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVAT 890
Query: 295 ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR 332
+Y+ + G I+S +AAIKR
Sbjct: 891 FGERVIDVFYVTDLLGAQITSPTR--------QAAIKR 920
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DRAGLL ++T + L++ A V T G + ++VFYV D G + S T ++
Sbjct: 858 VEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTDLLGAQITSPTRQAA 917
Query: 400 RK 401
K
Sbjct: 918 IK 919
>gi|422768421|ref|ZP_16822146.1| protein-P-II uridylyltransferase [Escherichia coli E1520]
gi|323935006|gb|EGB31379.1| protein-P-II uridylyltransferase [Escherichia coli E1520]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|92115857|ref|YP_575586.1| PII uridylyl-transferase [Nitrobacter hamburgensis X14]
gi|122418861|sp|Q1QRM1.1|GLND_NITHX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91798751|gb|ABE61126.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Nitrobacter
hamburgensis X14]
Length = 931
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT IE++G DRPGLL ++ A +S L N+ A V T R V Y+T + G I P
Sbjct: 849 HTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVT-DLLGARITAPT 907
Query: 185 TLAKIKRLLLYVL 197
A IKR L+++L
Sbjct: 908 RQAAIKRALIHLL 920
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 20 RMNP----PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
R+ P P+V V+N + + T+I+V ++ G L +L ++ L+L I A++++ GE
Sbjct: 829 RLRPFVVEPKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGER 888
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSL 103
DVF+VTD G +++ I+++L
Sbjct: 889 ARDVFYVTDLLGARITAPTRQAAIKRAL 916
>gi|422971431|ref|ZP_16974706.1| [protein-PII] uridylyltransferase [Escherichia coli TA124]
gi|371598780|gb|EHN87575.1| [protein-PII] uridylyltransferase [Escherichia coli TA124]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|378977073|ref|YP_005225214.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|402782334|ref|YP_006637880.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|421913573|ref|ZP_16343250.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421919192|ref|ZP_16348698.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|428148700|ref|ZP_18996553.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|364516484|gb|AEW59612.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|402543196|gb|AFQ67345.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|410112518|emb|CCM85875.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410118484|emb|CCM91323.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|427541341|emb|CCM92691.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 867
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 670 NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 728
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R I LE I +R+ + +
Sbjct: 729 FIVLEPDGSPLS--ADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPT 786
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 787 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 846
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 847 NELQQEVQQRL 857
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 669 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 727
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R Q PR A R V H
Sbjct: 728 TFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 787
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 788 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 839
>gi|417584985|ref|ZP_12235768.1| protein-P-II uridylyltransferase [Escherichia coli STEC_C165-02]
gi|345342348|gb|EGW74744.1| protein-P-II uridylyltransferase [Escherichia coli STEC_C165-02]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|218703421|ref|YP_002410940.1| PII uridylyl-transferase [Escherichia coli UMN026]
gi|293403236|ref|ZP_06647333.1| PII uridylyl-transferase [Escherichia coli FVEC1412]
gi|293408259|ref|ZP_06652099.1| hypothetical protein ECEG_03193 [Escherichia coli B354]
gi|298378771|ref|ZP_06988655.1| uridylyltransferase [Escherichia coli FVEC1302]
gi|300900796|ref|ZP_07118939.1| protein-P-II uridylyltransferase [Escherichia coli MS 198-1]
gi|331661541|ref|ZP_08362465.1| protein-P-II uridylyltransferase [Escherichia coli TA143]
gi|331681552|ref|ZP_08382189.1| protein-P-II uridylyltransferase [Escherichia coli H299]
gi|387605642|ref|YP_006094498.1| [protein-PII] uridylyltransferase [Escherichia coli 042]
gi|419935229|ref|ZP_14452314.1| PII uridylyl-transferase [Escherichia coli 576-1]
gi|432351799|ref|ZP_19595112.1| [protein-PII] uridylyltransferase [Escherichia coli KTE2]
gi|432400245|ref|ZP_19643006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE26]
gi|432429276|ref|ZP_19671742.1| [protein-PII] uridylyltransferase [Escherichia coli KTE181]
gi|432464018|ref|ZP_19706138.1| [protein-PII] uridylyltransferase [Escherichia coli KTE204]
gi|432474162|ref|ZP_19716179.1| [protein-PII] uridylyltransferase [Escherichia coli KTE208]
gi|432492469|ref|ZP_19734314.1| [protein-PII] uridylyltransferase [Escherichia coli KTE213]
gi|432520814|ref|ZP_19757985.1| [protein-PII] uridylyltransferase [Escherichia coli KTE228]
gi|432540988|ref|ZP_19777868.1| [protein-PII] uridylyltransferase [Escherichia coli KTE235]
gi|432614969|ref|ZP_19851106.1| [protein-PII] uridylyltransferase [Escherichia coli KTE75]
gi|432634611|ref|ZP_19870518.1| [protein-PII] uridylyltransferase [Escherichia coli KTE80]
gi|432644202|ref|ZP_19880016.1| [protein-PII] uridylyltransferase [Escherichia coli KTE83]
gi|432664322|ref|ZP_19899924.1| [protein-PII] uridylyltransferase [Escherichia coli KTE116]
gi|432768974|ref|ZP_20003353.1| [protein-PII] uridylyltransferase [Escherichia coli KTE50]
gi|432773317|ref|ZP_20007619.1| [protein-PII] uridylyltransferase [Escherichia coli KTE54]
gi|432837725|ref|ZP_20071221.1| [protein-PII] uridylyltransferase [Escherichia coli KTE140]
gi|432883856|ref|ZP_20099059.1| [protein-PII] uridylyltransferase [Escherichia coli KTE158]
gi|432909723|ref|ZP_20116996.1| [protein-PII] uridylyltransferase [Escherichia coli KTE190]
gi|432958894|ref|ZP_20149752.1| [protein-PII] uridylyltransferase [Escherichia coli KTE202]
gi|433017139|ref|ZP_20205415.1| [protein-PII] uridylyltransferase [Escherichia coli KTE105]
gi|433051380|ref|ZP_20238629.1| [protein-PII] uridylyltransferase [Escherichia coli KTE122]
gi|433061373|ref|ZP_20248347.1| [protein-PII] uridylyltransferase [Escherichia coli KTE125]
gi|433066286|ref|ZP_20253141.1| [protein-PII] uridylyltransferase [Escherichia coli KTE128]
gi|433157103|ref|ZP_20341986.1| [protein-PII] uridylyltransferase [Escherichia coli KTE177]
gi|433176526|ref|ZP_20361006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE82]
gi|433201606|ref|ZP_20385423.1| [protein-PII] uridylyltransferase [Escherichia coli KTE95]
gi|226723943|sp|B7N834.1|GLND_ECOLU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218430518|emb|CAR11384.1| uridylyltransferase [Escherichia coli UMN026]
gi|284919942|emb|CBG32997.1| [protein-PII] uridylyltransferase [Escherichia coli 042]
gi|291430151|gb|EFF03165.1| PII uridylyl-transferase [Escherichia coli FVEC1412]
gi|291472510|gb|EFF14992.1| hypothetical protein ECEG_03193 [Escherichia coli B354]
gi|298281105|gb|EFI22606.1| uridylyltransferase [Escherichia coli FVEC1302]
gi|300355714|gb|EFJ71584.1| protein-P-II uridylyltransferase [Escherichia coli MS 198-1]
gi|331061456|gb|EGI33419.1| protein-P-II uridylyltransferase [Escherichia coli TA143]
gi|331081773|gb|EGI52934.1| protein-P-II uridylyltransferase [Escherichia coli H299]
gi|388404967|gb|EIL65406.1| PII uridylyl-transferase [Escherichia coli 576-1]
gi|430881378|gb|ELC04632.1| [protein-PII] uridylyltransferase [Escherichia coli KTE2]
gi|430930360|gb|ELC50861.1| [protein-PII] uridylyltransferase [Escherichia coli KTE26]
gi|430948458|gb|ELC68046.1| [protein-PII] uridylyltransferase [Escherichia coli KTE181]
gi|430983321|gb|ELC99984.1| [protein-PII] uridylyltransferase [Escherichia coli KTE204]
gi|431011853|gb|ELD25927.1| [protein-PII] uridylyltransferase [Escherichia coli KTE208]
gi|431014221|gb|ELD27930.1| [protein-PII] uridylyltransferase [Escherichia coli KTE213]
gi|431046197|gb|ELD56316.1| [protein-PII] uridylyltransferase [Escherichia coli KTE228]
gi|431065143|gb|ELD73920.1| [protein-PII] uridylyltransferase [Escherichia coli KTE235]
gi|431158678|gb|ELE59276.1| [protein-PII] uridylyltransferase [Escherichia coli KTE75]
gi|431165463|gb|ELE65816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE80]
gi|431176083|gb|ELE76069.1| [protein-PII] uridylyltransferase [Escherichia coli KTE83]
gi|431205361|gb|ELF03854.1| [protein-PII] uridylyltransferase [Escherichia coli KTE116]
gi|431320132|gb|ELG07780.1| [protein-PII] uridylyltransferase [Escherichia coli KTE50]
gi|431321827|gb|ELG09427.1| [protein-PII] uridylyltransferase [Escherichia coli KTE54]
gi|431392556|gb|ELG76129.1| [protein-PII] uridylyltransferase [Escherichia coli KTE140]
gi|431420782|gb|ELH03058.1| [protein-PII] uridylyltransferase [Escherichia coli KTE158]
gi|431448773|gb|ELH29486.1| [protein-PII] uridylyltransferase [Escherichia coli KTE190]
gi|431483389|gb|ELH63081.1| [protein-PII] uridylyltransferase [Escherichia coli KTE202]
gi|431538071|gb|ELI14176.1| [protein-PII] uridylyltransferase [Escherichia coli KTE105]
gi|431576473|gb|ELI49160.1| [protein-PII] uridylyltransferase [Escherichia coli KTE122]
gi|431589652|gb|ELI60866.1| [protein-PII] uridylyltransferase [Escherichia coli KTE125]
gi|431593148|gb|ELI63712.1| [protein-PII] uridylyltransferase [Escherichia coli KTE128]
gi|431683272|gb|ELJ48910.1| [protein-PII] uridylyltransferase [Escherichia coli KTE177]
gi|431711703|gb|ELJ76016.1| [protein-PII] uridylyltransferase [Escherichia coli KTE82]
gi|431727332|gb|ELJ91092.1| [protein-PII] uridylyltransferase [Escherichia coli KTE95]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|359788247|ref|ZP_09291225.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255938|gb|EHK58828.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 935
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
+ I+++G DRPGLLSE+ LSDL ++ A + T ++ Y+ S+ TG ID+P
Sbjct: 847 SVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYV-SDLTGQKIDNPAR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
L I+ L+ L+G+ +R
Sbjct: 906 LKTIRDRLIATLQGEAGQRG 925
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV + NT + + ++I V ++ G L E+ L+DL L I A+I++ GE +D F+V+
Sbjct: 834 PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVS 893
Query: 84 DQNGNKL 90
D G K+
Sbjct: 894 DLTGQKI 900
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSETI 396
DR GLLS++T + L + A +TT G + ++ FYV D +G NP + +TI
Sbjct: 855 DRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSDLTGQKIDNPARLKTI 909
>gi|300938573|ref|ZP_07153307.1| protein-P-II uridylyltransferase [Escherichia coli MS 21-1]
gi|432678579|ref|ZP_19913984.1| [protein-PII] uridylyltransferase [Escherichia coli KTE143]
gi|300456486|gb|EFK19979.1| protein-P-II uridylyltransferase [Escherichia coli MS 21-1]
gi|431225535|gb|ELF22735.1| [protein-PII] uridylyltransferase [Escherichia coli KTE143]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|261324258|ref|ZP_05963455.1| uridylyltransferase [Brucella neotomae 5K33]
gi|261300238|gb|EEY03735.1| uridylyltransferase [Brucella neotomae 5K33]
Length = 934
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|432390060|ref|ZP_19632926.1| [protein-PII] uridylyltransferase [Escherichia coli KTE21]
gi|432717179|ref|ZP_19952183.1| [protein-PII] uridylyltransferase [Escherichia coli KTE9]
gi|432791392|ref|ZP_20025489.1| [protein-PII] uridylyltransferase [Escherichia coli KTE78]
gi|432797362|ref|ZP_20031391.1| [protein-PII] uridylyltransferase [Escherichia coli KTE79]
gi|432818386|ref|ZP_20052113.1| [protein-PII] uridylyltransferase [Escherichia coli KTE115]
gi|430923673|gb|ELC44408.1| [protein-PII] uridylyltransferase [Escherichia coli KTE21]
gi|431267300|gb|ELF58818.1| [protein-PII] uridylyltransferase [Escherichia coli KTE9]
gi|431343060|gb|ELG30030.1| [protein-PII] uridylyltransferase [Escherichia coli KTE78]
gi|431346576|gb|ELG33481.1| [protein-PII] uridylyltransferase [Escherichia coli KTE79]
gi|431359375|gb|ELG46020.1| [protein-PII] uridylyltransferase [Escherichia coli KTE115]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|386622578|ref|YP_006142306.1| uridylyltransferase [Escherichia coli O7:K1 str. CE10]
gi|349736316|gb|AEQ11022.1| uridylyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|300919730|ref|ZP_07136216.1| protein-P-II uridylyltransferase [Escherichia coli MS 115-1]
gi|432529467|ref|ZP_19766525.1| [protein-PII] uridylyltransferase [Escherichia coli KTE233]
gi|432532380|ref|ZP_19769388.1| [protein-PII] uridylyltransferase [Escherichia coli KTE234]
gi|300413230|gb|EFJ96540.1| protein-P-II uridylyltransferase [Escherichia coli MS 115-1]
gi|431057805|gb|ELD67223.1| [protein-PII] uridylyltransferase [Escherichia coli KTE233]
gi|431064861|gb|ELD73719.1| [protein-PII] uridylyltransferase [Escherichia coli KTE234]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|297823847|ref|XP_002879806.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297325645|gb|EFH56065.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 411
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 150/354 (42%), Gaps = 28/354 (7%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT-DQNGNKLSEDDV 95
T++ V+ ++ G L +++ + L I RA S+DG W VF VT D + ++ D +
Sbjct: 21 TIVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPRIDWDSL 80
Query: 96 SERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R+ + SF +S V ++ RDR GLL +V VL++L+ +
Sbjct: 81 KNRLLSACPSCLGSFYFCLQS-NVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 156 AEVW-THNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS 214
+V T + R+ + +IT L T K L VL S ++
Sbjct: 140 VKVMTTPDGRVLDMFFITDAMDLLHTKQRQT--KTCDHLTAVLG--EHGVSCELELAGPE 195
Query: 215 THKERRLHQM--MYADRDYDMN-YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPK 271
+R + + AD + + + SGS+S +K ++TV++ +TV+ +RC D+
Sbjct: 196 LESVQRFSSLPPVAADELFGPDGFDNSGSSS--NKAVLTVDNQLSPAHTVLQIRCVDQKG 253
Query: 272 LLFDAVCTLTDMQYVVYHATVIAESPEAYQ--EYYIRHVDGNPISSEAE--------RQR 321
L +D + T D + + + + Y+ E ++R DG I ++
Sbjct: 254 LFYDILRTSKDCDVHIAYGR-FSSKVKGYRNLELFVRGTDGKKIVDPKHQANFCARLKEE 312
Query: 322 VINCLEAAIKRRTSE-----GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
++ L I R + +EL + R + DVT + G+ + AE+
Sbjct: 313 MMCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEI 366
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP-ISSEAE 318
T+V + CPD L + + + A + Y +++ +P I ++
Sbjct: 21 TIVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPRIDWDSL 80
Query: 319 RQRVIN-----------CLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
+ R+++ CL++ + + S + L+ C DR GLL DVT++ E ++ R
Sbjct: 81 KNRLLSACPSCLGSFYFCLQSNVSKPPSLYL-LKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 368 AEV-TTRGSQAVNVFYVVDA 386
+V TT + +++F++ DA
Sbjct: 140 VKVMTTPDGRVLDMFFITDA 159
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
C D +GL S + RI E GLS+TRA+ +T G VF+V +P
Sbjct: 27 CPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSP 73
>gi|288958557|ref|YP_003448898.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
gi|288910865|dbj|BAI72354.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
Length = 947
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+V+ ++ G L +L + L++L L I A IS+ GE +DVF+V
Sbjct: 840 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYV 899
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++ + +I++ L
Sbjct: 900 KDVFGLKVTHEGKLAKIKERL 920
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 61 DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDD----VSERIQQSLGPRARSFRSL--R 114
D++ R + ++G +DVF V D G D +S I++ L + + L R
Sbjct: 768 DIVDARIFTMTNG-MALDVFSVQDAAGGAFESSDKLAKLSVMIEKVLSGQLKPLNDLATR 826
Query: 115 RS----------------VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEV 158
R+ + A+ HT IE+ GRDRPGLL ++ LS+L + A++
Sbjct: 827 RTSHASRTRVFHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKI 886
Query: 159 WTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
T + V Y+ + GL + LAKIK LL L
Sbjct: 887 STFGEKAIDVFYV-KDVFGLKVTHEGKLAKIKERLLSAL 924
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL D+TR L ++ A+++T G +A++VFYV D G V E
Sbjct: 856 IEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKDVFGLKVTHE 910
>gi|386399179|ref|ZP_10083957.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739805|gb|EIG60001.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
Length = 929
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I P
Sbjct: 848 YTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQISAPT 906
Query: 185 TLAKIKRLLLYVLKGDR 201
A IK L +V+ GD+
Sbjct: 907 RQAAIKSALTHVMAGDK 923
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+I++ ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G ++S I+ +L
Sbjct: 896 DLLGAQISAPTRQAAIKSAL 915
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T ++
Sbjct: 851 IEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQISAPTRQAA 910
Query: 400 RKEIGLTILRVKDDA 414
K LT + D A
Sbjct: 911 IKS-ALTHVMAGDKA 924
>gi|422333327|ref|ZP_16414338.1| [protein-PII] uridylyltransferase [Escherichia coli 4_1_47FAA]
gi|373245842|gb|EHP65307.1| [protein-PII] uridylyltransferase [Escherichia coli 4_1_47FAA]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|422830331|ref|ZP_16878490.1| uridylyltransferase [Escherichia coli B093]
gi|371605323|gb|EHN93940.1| uridylyltransferase [Escherichia coli B093]
Length = 890
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|225851679|ref|YP_002731912.1| PII uridylyl-transferase [Brucella melitensis ATCC 23457]
gi|256264811|ref|ZP_05467343.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|384210514|ref|YP_005599596.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|384407618|ref|YP_005596239.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|384444233|ref|YP_005602952.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
gi|254798829|sp|C0RGK0.1|GLND_BRUMB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|225640044|gb|ACN99957.1| protein-P-II uridylyltransferase [Brucella melitensis ATCC 23457]
gi|263095221|gb|EEZ18890.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|326408165|gb|ADZ65230.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|326537877|gb|ADZ86092.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|349742229|gb|AEQ07772.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
Length = 934
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|399519985|ref|ZP_10760776.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112382|emb|CCH37335.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 897
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I + +
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 303 YYIRHVDG-----NPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG NP + R+ +I L+ I+RR +
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + RIF E LS+ A++ T G + +VF++ D G P+
Sbjct: 809 DAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDDKGQPL 868
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 50/80 (62%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G LS+ ++ R+Q+++
Sbjct: 862 DDKGQPLSDPELCARLQETI 881
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 27/192 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G + + DD IQ+ + PR + V +
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT + G
Sbjct: 808 NDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDD-KGQ 866
Query: 179 PIDDPDTLAKIK 190
P+ DP+ A+++
Sbjct: 867 PLSDPELCARLQ 878
>gi|417790357|ref|ZP_12437915.1| PII uridylyl-transferase [Cronobacter sakazakii E899]
gi|449309444|ref|YP_007441800.1| PII uridylyl-transferase [Cronobacter sakazakii SP291]
gi|333955559|gb|EGL73304.1| PII uridylyl-transferase [Cronobacter sakazakii E899]
gi|449099477|gb|AGE87511.1| PII uridylyl-transferase [Cronobacter sakazakii SP291]
Length = 891
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 871
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 872 LLQQEVRQRL 881
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 753 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 869
>gi|422587022|ref|ZP_16661693.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330872741|gb|EGH06890.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 898
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 35/191 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 867
Query: 392 KSETIESVRKE 402
+ S+ +E
Sbjct: 868 SDPQLCSLLQE 878
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + +Q+++
Sbjct: 861 DANNQPLSDPQLCSLLQEAI 880
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 33/188 (17%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + + ERIQ + R+ ++R V Q L+H
Sbjct: 748 YIVLDHEGGSIGNN--PERIQDIRDGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDP 183
P+ DP
Sbjct: 863 NNQPLSDP 870
>gi|156935318|ref|YP_001439234.1| PII uridylyl-transferase [Cronobacter sakazakii ATCC BAA-894]
gi|166226150|sp|A7MGS0.1|GLND_ENTS8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|156533572|gb|ABU78398.1| hypothetical protein ESA_03176 [Cronobacter sakazakii ATCC BAA-894]
Length = 892
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 695 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 754 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 812
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 813 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 872
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 873 LLQQEVRQRL 882
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 694 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 753
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 754 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 813
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 814 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 870
>gi|261756034|ref|ZP_05999743.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
gi|261745787|gb|EEY33713.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
Length = 675
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 575 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 634
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 635 DLVGHKISNATRQGNIKRKL 654
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 588 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 646
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 647 QGNIKRKLLALLGAENGART 666
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 596 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 655
Query: 406 TILRVKDDAYS--KSP 419
+L ++ A + +SP
Sbjct: 656 ALLGAENGARTNGRSP 671
>gi|265983322|ref|ZP_06096057.1| uridylyltransferase [Brucella sp. 83/13]
gi|306839592|ref|ZP_07472396.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
gi|264661914|gb|EEZ32175.1| uridylyltransferase [Brucella sp. 83/13]
gi|306405290|gb|EFM61565.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
Length = 934
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|425286680|ref|ZP_18677634.1| protein-P-II uridylyltransferase [Escherichia coli 3006]
gi|408219791|gb|EKI43909.1| protein-P-II uridylyltransferase [Escherichia coli 3006]
Length = 890
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|306844413|ref|ZP_07477003.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
gi|306275226|gb|EFM56976.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|265987872|ref|ZP_06100429.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
gi|264660069|gb|EEZ30330.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|256368608|ref|YP_003106114.1| PII uridylyl-transferase [Brucella microti CCM 4915]
gi|255998766|gb|ACU47165.1| protein-P-II uridylyl-transferase [Brucella microti CCM 4915]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|422651057|ref|ZP_16713856.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964139|gb|EGH64399.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 898
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 35/191 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 867
Query: 392 KSETIESVRKE 402
+ S+ +E
Sbjct: 868 SDPQLCSLLQE 878
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + +Q+++
Sbjct: 861 DANNQPLSDPQLCSLLQEAI 880
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 33/188 (17%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + + ERIQ + R+ ++R V Q L+H
Sbjct: 748 YIVLDHEGGSIGNN--PERIQDIRDGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDP 183
P+ DP
Sbjct: 863 NNQPLSDP 870
>gi|306842568|ref|ZP_07475219.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
gi|306287424|gb|EFM58904.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
Length = 858
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 758 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 817
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 818 DLVGHKISNATRQGNIKRKL 837
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 771 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 829
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 830 QGNIKRKLLALLGAENGART 849
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 779 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 838
Query: 406 TILRVKDDAYS--KSP 419
+L ++ A + +SP
Sbjct: 839 ALLGAENGARTNGRSP 854
>gi|260567217|ref|ZP_05837687.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
gi|260156735|gb|EEW91815.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|261316802|ref|ZP_05955999.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340789768|ref|YP_004755232.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
gi|261296025|gb|EEX99521.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340558226|gb|AEK53464.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYS--KSP 419
+L ++ A + +SP
Sbjct: 915 ALLGAENGARTNGRSP 930
>gi|239830994|ref|ZP_04679323.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239823261|gb|EEQ94829.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 969
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 869 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 928
Query: 84 DQNGNKLS 91
D G+K+S
Sbjct: 929 DLVGHKIS 936
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 882 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 940
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
I+R LL VL + ++
Sbjct: 941 QGNIRRKLLGVLGAENGSKT 960
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T
Sbjct: 884 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 939
>gi|429120943|ref|ZP_19181598.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 680]
gi|426324573|emb|CCK12335.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 680]
Length = 891
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 871
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 872 LLQQEVRQRL 881
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 753 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 869
>gi|23501056|ref|NP_697183.1| PII uridylyl-transferase [Brucella suis 1330]
gi|376279844|ref|YP_005153850.1| PII uridylyl-transferase [Brucella suis VBI22]
gi|384223838|ref|YP_005615002.1| PII uridylyl-transferase [Brucella suis 1330]
gi|30173076|sp|Q8G312.1|GLND_BRUSU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|23346922|gb|AAN29098.1| [protein-pII] uridylyltransferase, putative [Brucella suis 1330]
gi|343382018|gb|AEM17510.1| PII uridylyl-transferase [Brucella suis 1330]
gi|358257443|gb|AEU05178.1| PII uridylyl-transferase [Brucella suis VBI22]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|17988087|ref|NP_540721.1| PII uridylyl-transferase [Brucella melitensis bv. 1 str. 16M]
gi|62289122|ref|YP_220915.1| PII uridylyl-transferase [Brucella abortus bv. 1 str. 9-941]
gi|82699061|ref|YP_413635.1| PII uridylyl-transferase [Brucella melitensis biovar Abortus 2308]
gi|189023397|ref|YP_001934165.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225626684|ref|ZP_03784723.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237814613|ref|ZP_04593611.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260546419|ref|ZP_05822159.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260563217|ref|ZP_05833703.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260756000|ref|ZP_05868348.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759224|ref|ZP_05871572.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760946|ref|ZP_05873289.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|261215276|ref|ZP_05929557.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261221372|ref|ZP_05935653.1| uridylyltransferase [Brucella ceti B1/94]
gi|261314640|ref|ZP_05953837.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261759259|ref|ZP_06002968.1| uridylyltransferase [Brucella sp. F5/99]
gi|265992346|ref|ZP_06104903.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994089|ref|ZP_06106646.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265997332|ref|ZP_06109889.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|376271945|ref|YP_005150523.1| uridylyltransferase [Brucella abortus A13334]
gi|423167714|ref|ZP_17154417.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|423169910|ref|ZP_17156585.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|423175099|ref|ZP_17161768.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|423178050|ref|ZP_17164695.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|423179343|ref|ZP_17165984.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|423182473|ref|ZP_17169110.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|423186584|ref|ZP_17173198.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
gi|423190978|ref|ZP_17177586.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|22256763|sp|Q8YES3.1|GLND_BRUME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|75497477|sp|Q57FN0.1|GLND_BRUAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206741|sp|Q2YNZ1.1|GLND_BRUA2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238689407|sp|B2S8D8.1|GLND_BRUA1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|17983838|gb|AAL52985.1| [protein-pii] uridylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|62195254|gb|AAX73554.1| [protein-pII] uridylyltransferase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615162|emb|CAJ10099.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:Metal-dependent phosphohydrolase, HD region
[Brucella melitensis biovar Abortus 2308]
gi|189018969|gb|ACD71691.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225618341|gb|EEH15384.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237789450|gb|EEP63660.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260096526|gb|EEW80402.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260153233|gb|EEW88325.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260669542|gb|EEX56482.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260671378|gb|EEX58199.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676108|gb|EEX62929.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260916883|gb|EEX83744.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919956|gb|EEX86609.1| uridylyltransferase [Brucella ceti B1/94]
gi|261303666|gb|EEY07163.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261739243|gb|EEY27239.1| uridylyltransferase [Brucella sp. F5/99]
gi|262551800|gb|EEZ07790.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|262765070|gb|EEZ10991.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|263003412|gb|EEZ15705.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|363399551|gb|AEW16521.1| uridylyltransferase [Brucella abortus A13334]
gi|374537330|gb|EHR08843.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|374541148|gb|EHR12647.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|374542146|gb|EHR13635.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|374547534|gb|EHR18988.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|374550862|gb|EHR22297.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|374551319|gb|EHR22753.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|374553668|gb|EHR25082.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|374558263|gb|EHR29657.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|163842415|ref|YP_001626819.1| PII uridylyl-transferase [Brucella suis ATCC 23445]
gi|189041205|sp|B0CIQ3.1|GLND_BRUSI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|163673138|gb|ABY37249.1| protein-P-II uridylyltransferase [Brucella suis ATCC 23445]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|161618133|ref|YP_001592020.1| PII uridylyl-transferase [Brucella canis ATCC 23365]
gi|376275082|ref|YP_005115521.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
gi|161334944|gb|ABX61249.1| protein-P-II uridylyltransferase [Brucella canis ATCC 23365]
gi|363403649|gb|AEW13944.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|424798074|ref|ZP_18223616.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 696]
gi|423233795|emb|CCK05486.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 696]
Length = 891
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 871
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 872 LLQQEVRQRL 881
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 753 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 869
>gi|389842164|ref|YP_006344248.1| PII uridylyl-transferase [Cronobacter sakazakii ES15]
gi|387852640|gb|AFK00738.1| PII uridylyl-transferase [Cronobacter sakazakii ES15]
Length = 892
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 695 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 754 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 812
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 813 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 872
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 873 LLQQEVRQRL 882
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 694 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 753
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 754 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 813
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 814 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 870
>gi|257487087|ref|ZP_05641128.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 403
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 193 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 252
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I ER Q + N L A IKRR +
Sbjct: 253 YIVLDNEGGSIGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 312
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 313 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 372
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 306 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 365
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 366 DANNHPLSDPQLCSQLQDAI 385
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 193 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 252
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + D ER+Q+ + R+ ++R V Q L+H
Sbjct: 253 YIVLDNEGGSIG--DNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 308
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 309 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 367
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 368 NNHPLSDPQLCSQLQ 382
>gi|148560425|ref|YP_001258178.1| PII uridylyl-transferase [Brucella ovis ATCC 25840]
gi|166226141|sp|A5VN81.1|GLND_BRUO2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148371682|gb|ABQ61661.1| protein-P-II uridylyltransferase [Brucella ovis ATCC 25840]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|261218146|ref|ZP_05932427.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261321007|ref|ZP_05960204.1| uridylyltransferase [Brucella ceti M644/93/1]
gi|260923235|gb|EEX89803.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261293697|gb|EEX97193.1| uridylyltransferase [Brucella ceti M644/93/1]
Length = 934
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|260885020|ref|ZP_05896634.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297247538|ref|ZP_06931256.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260874548|gb|EEX81617.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297174707|gb|EFH34054.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 934
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>gi|150395259|ref|YP_001325726.1| PII uridylyl-transferase [Sinorhizobium medicae WSM419]
gi|166232254|sp|A6U5G1.1|GLND_SINMW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150026774|gb|ABR58891.1| metal dependent phosphohydrolase [Sinorhizobium medicae WSM419]
Length = 949
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N + K T+I+V+ ++ G L E+ VL+DL L I A+I++ GE +D F+VT
Sbjct: 831 PEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARS 109
D G+K++ SE Q ++ R ++
Sbjct: 891 DLVGSKIT----SENRQMNIAARLKA 912
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 65 RRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL- 123
RRA +S G+ DV +G K D ++ R + R+R+F ++ V + AL
Sbjct: 791 RRA--ASIGKLIEDVL-----SGRKKLPDVIASRTRSK--KRSRAF-TVTPEVTISNALS 840
Query: 124 -EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
+ T IE+ G DR GLLSEV AVLSDL ++ A + T ++ Y+T + G I
Sbjct: 841 NKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT-DLVGSKITS 899
Query: 183 PDTLAKIKRLLLYVLKGDRDK 203
+ I L VL G+ D+
Sbjct: 900 ENRQMNIAARLKAVLAGEVDE 920
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
DR GLLS+VT + + L + A +TT G + ++ FYV D G+ + SE
Sbjct: 852 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKITSE 900
>gi|419011724|ref|ZP_13559094.1| protein-P-II uridylyltransferase [Escherichia coli DEC1D]
gi|377865258|gb|EHU30050.1| protein-P-II uridylyltransferase [Escherichia coli DEC1D]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAI---------KRRTSEGIS------------- 339
+ + DG+P+S A+R VI LE + RR +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|429091997|ref|ZP_19154646.1| [Protein-PII] uridylyltransferase [Cronobacter dublinensis 1210]
gi|426743310|emb|CCJ80759.1| [Protein-PII] uridylyltransferase [Cronobacter dublinensis 1210]
Length = 891
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SQPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVDTEVNFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A + +
Sbjct: 812 TERKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGLNN 871
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 872 LLQQEVRQRL 881
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSQPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 753 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVDTEVNFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 ERKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGL 869
>gi|429114074|ref|ZP_19174992.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 701]
gi|426317203|emb|CCK01105.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 701]
Length = 891
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 871
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 872 LLQQEVRQRL 881
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 753 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 869
>gi|215485328|ref|YP_002327759.1| PII uridylyl-transferase [Escherichia coli O127:H6 str. E2348/69]
gi|419016662|ref|ZP_13563990.1| protein-P-II uridylyltransferase [Escherichia coli DEC1E]
gi|419022252|ref|ZP_13569501.1| protein-P-II uridylyltransferase [Escherichia coli DEC2A]
gi|419032752|ref|ZP_13579853.1| protein-P-II uridylyltransferase [Escherichia coli DEC2D]
gi|254798831|sp|B7UIL2.1|GLND_ECO27 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|215263400|emb|CAS07720.1| uridylyltransferase [Escherichia coli O127:H6 str. E2348/69]
gi|377867869|gb|EHU32623.1| protein-P-II uridylyltransferase [Escherichia coli DEC1E]
gi|377869335|gb|EHU34052.1| protein-P-II uridylyltransferase [Escherichia coli DEC2A]
gi|377884683|gb|EHU49191.1| protein-P-II uridylyltransferase [Escherichia coli DEC2D]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAI---------KRRTSEGIS------------- 339
+ + DG+P+S A+R VI LE + RR +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|444309189|ref|ZP_21144829.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
gi|443487580|gb|ELT50342.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
Length = 934
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLS 91
D G+K+S
Sbjct: 894 DLVGHKIS 901
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
I+R LL VL + ++
Sbjct: 906 QGNIRRKLLGVLGAENGSKT 925
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 904
>gi|432711854|ref|ZP_19946908.1| [protein-PII] uridylyltransferase [Escherichia coli KTE8]
gi|431260398|gb|ELF52496.1| [protein-PII] uridylyltransferase [Escherichia coli KTE8]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R +I LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEIIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|416334595|ref|ZP_11671428.1| PII uridylyl-transferase [Escherichia coli WV_060327]
gi|432439502|ref|ZP_19681867.1| [protein-PII] uridylyltransferase [Escherichia coli KTE189]
gi|432444625|ref|ZP_19686936.1| [protein-PII] uridylyltransferase [Escherichia coli KTE191]
gi|433012340|ref|ZP_20200729.1| [protein-PII] uridylyltransferase [Escherichia coli KTE104]
gi|433026535|ref|ZP_20214489.1| [protein-PII] uridylyltransferase [Escherichia coli KTE106]
gi|433325052|ref|ZP_20402269.1| PII uridylyl-transferase [Escherichia coli J96]
gi|320196957|gb|EFW71578.1| PII uridylyl-transferase [Escherichia coli WV_060327]
gi|430969910|gb|ELC87003.1| [protein-PII] uridylyltransferase [Escherichia coli KTE189]
gi|430976737|gb|ELC93595.1| [protein-PII] uridylyltransferase [Escherichia coli KTE191]
gi|431527962|gb|ELI04676.1| [protein-PII] uridylyltransferase [Escherichia coli KTE106]
gi|431536909|gb|ELI13065.1| [protein-PII] uridylyltransferase [Escherichia coli KTE104]
gi|432346601|gb|ELL41082.1| PII uridylyl-transferase [Escherichia coli J96]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAI---------KRRTSEGIS------------- 339
+ + DG+P+S A+R VI LE + RR +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|332160590|ref|YP_004297167.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664820|gb|ADZ41464.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859596|emb|CBX69936.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica W22703]
Length = 892
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 37/191 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + CPDRP L F AV D + + H I + + A
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWCPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEG------------------------- 337
+ + DG+P++ + +I+ L+ A+ R+ +
Sbjct: 754 FIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTH 812
Query: 338 ----ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D +
Sbjct: 813 NERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSI 872
Query: 394 ETIESVRKEIG 404
ET R+E+
Sbjct: 873 ET----RRELA 879
>gi|157147403|ref|YP_001454722.1| PII uridylyl-transferase [Citrobacter koseri ATCC BAA-895]
gi|166226148|sp|A8ALC3.1|GLND_CITK8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|157084608|gb|ABV14286.1| hypothetical protein CKO_03202 [Citrobacter koseri ATCC BAA-895]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
++PL+ V +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 TRPLILVSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R I LE AI +
Sbjct: 752 FIVLEPDGSPLS--ADRHEAIRFGLEQAITQSSWQPPQPRRQPAKLRHFTVDTEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|331661238|ref|ZP_08362170.1| protein-P-II uridylyltransferase [Escherichia coli TA206]
gi|415837508|ref|ZP_11519582.1| protein-P-II uridylyltransferase [Escherichia coli RN587/1]
gi|417284779|ref|ZP_12072074.1| protein-P-II uridylyltransferase [Escherichia coli 3003]
gi|422367557|ref|ZP_16447992.1| protein-P-II uridylyltransferase [Escherichia coli MS 16-3]
gi|425276040|ref|ZP_18667395.1| protein-P-II uridylyltransferase [Escherichia coli ARS4.2123]
gi|432896838|ref|ZP_20107932.1| [protein-PII] uridylyltransferase [Escherichia coli KTE192]
gi|433027185|ref|ZP_20215065.1| [protein-PII] uridylyltransferase [Escherichia coli KTE109]
gi|315300706|gb|EFU59933.1| protein-P-II uridylyltransferase [Escherichia coli MS 16-3]
gi|323190434|gb|EFZ75709.1| protein-P-II uridylyltransferase [Escherichia coli RN587/1]
gi|331052280|gb|EGI24319.1| protein-P-II uridylyltransferase [Escherichia coli TA206]
gi|386242988|gb|EII84723.1| protein-P-II uridylyltransferase [Escherichia coli 3003]
gi|408207591|gb|EKI32312.1| protein-P-II uridylyltransferase [Escherichia coli ARS4.2123]
gi|431430982|gb|ELH12761.1| [protein-PII] uridylyltransferase [Escherichia coli KTE192]
gi|431546902|gb|ELI21289.1| [protein-PII] uridylyltransferase [Escherichia coli KTE109]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAI---------KRRTSEGIS------------- 339
+ + DG+P+S A+R VI LE + RR +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|312966302|ref|ZP_07780528.1| protein-P-II uridylyltransferase [Escherichia coli 2362-75]
gi|417753991|ref|ZP_12402088.1| protein-P-II uridylyltransferase [Escherichia coli DEC2B]
gi|418995194|ref|ZP_13542814.1| protein-P-II uridylyltransferase [Escherichia coli DEC1A]
gi|419000333|ref|ZP_13547899.1| protein-P-II uridylyltransferase [Escherichia coli DEC1B]
gi|419005890|ref|ZP_13553348.1| protein-P-II uridylyltransferase [Escherichia coli DEC1C]
gi|419027145|ref|ZP_13574349.1| protein-P-II uridylyltransferase [Escherichia coli DEC2C]
gi|419037927|ref|ZP_13584990.1| protein-P-II uridylyltransferase [Escherichia coli DEC2E]
gi|312289545|gb|EFR17439.1| protein-P-II uridylyltransferase [Escherichia coli 2362-75]
gi|377850561|gb|EHU15523.1| protein-P-II uridylyltransferase [Escherichia coli DEC1A]
gi|377851631|gb|EHU16576.1| protein-P-II uridylyltransferase [Escherichia coli DEC1C]
gi|377854394|gb|EHU19272.1| protein-P-II uridylyltransferase [Escherichia coli DEC1B]
gi|377880921|gb|EHU45487.1| protein-P-II uridylyltransferase [Escherichia coli DEC2B]
gi|377886381|gb|EHU50863.1| protein-P-II uridylyltransferase [Escherichia coli DEC2C]
gi|377899435|gb|EHU63783.1| protein-P-II uridylyltransferase [Escherichia coli DEC2E]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAI---------KRRTSEGIS------------- 339
+ + DG+P+S A+R VI LE + RR +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|420369740|ref|ZP_14870415.1| HD domain protein, partial [Shigella flexneri 1235-66]
gi|391320953|gb|EIQ77726.1| HD domain protein, partial [Shigella flexneri 1235-66]
Length = 549
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 352 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 410
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 411 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 468
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 469 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 528
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 529 NELQQEVHQRL 539
>gi|357386406|ref|YP_004901130.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
gi|351595043|gb|AEQ53380.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
Length = 929
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P + + N + K T+I++ ++ G L L + L+DL+L I A+I + GE +DVF+V
Sbjct: 835 PTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYV 894
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G K++ +RI ++L
Sbjct: 895 TDLTGGKITSKVRQKRIHEAL 915
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL +TR + L++ A + T G +AV+VFYV D +G + S+
Sbjct: 851 IEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDLTGGKITSK 905
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
T IE++G DR GLL + LSDL + A + T+ + V Y+T G
Sbjct: 849 TVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDLTGG 900
>gi|153007502|ref|YP_001368717.1| PII uridylyl-transferase [Ochrobactrum anthropi ATCC 49188]
gi|166232253|sp|A6WV84.1|GLND_OCHA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|151559390|gb|ABS12888.1| metal dependent phosphohydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 934
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLS 91
D G+K+S
Sbjct: 894 DLVGHKIS 901
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
I+R LL VL G+ ++
Sbjct: 906 QGNIRRKLLGVLSGENGSKT 925
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 904
>gi|123443487|ref|YP_001007460.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420259722|ref|ZP_14762421.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|166232256|sp|A1JP85.1|GLND_YERE8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122090448|emb|CAL13316.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512815|gb|EKA26651.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 892
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 37/191 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + CPDRP L F AV D + + H I + + A
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWCPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEG------------------------- 337
+ + DG+P++ + +I+ L+ A+ R+ +
Sbjct: 754 FIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTH 812
Query: 338 ----ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D +
Sbjct: 813 NERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSI 872
Query: 394 ETIESVRKEIG 404
ET R+E+
Sbjct: 873 ET----RRELA 879
>gi|433547816|ref|ZP_20503867.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
gi|431791242|emb|CCO66907.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
Length = 892
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 31/181 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
+KPLV V +G T + + CPDRP L V L V+ A + A +
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTF 754
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEG-------------------------- 337
+ DG+P++ + +I+ L+ A+ R+ +
Sbjct: 755 IVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHN 813
Query: 338 ---ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D + E
Sbjct: 814 ERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSIE 873
Query: 395 T 395
T
Sbjct: 874 T 874
>gi|167854603|ref|ZP_02477384.1| uridylyltransferase [Haemophilus parasuis 29755]
gi|167854358|gb|EDS25591.1| uridylyltransferase [Haemophilus parasuis 29755]
Length = 864
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDVFHV 82
P V + N R AT I V ++ + Q+L+ + I A I +SD +D F +
Sbjct: 672 PMVLISNQYARGATEIFVHCQDQAQLFARIAQMLSQKKVSIHDAQILTSDHGLVLDSFII 731
Query: 83 TDQNGNKLSEDDVSERIQQS-----LGPRARSFRSLRRSVGVQAALEHTTI--------- 128
T+ NG L +D+ SE+IQ + L + F ++SV QA T I
Sbjct: 732 TEMNGEPL-DDERSEQIQSALVKTLLADTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPN 790
Query: 129 ----ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
EL DR GLL+++ + LK N++ A++ T R+ ++++ G ++
Sbjct: 791 QTAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGERVEDFFVVSNQQNGALAEEEQ 850
Query: 185 TLAKIKRLLLYVLKGD 200
A +K+ LL +L+ +
Sbjct: 851 --AMLKQHLLAMLEQE 864
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 32/192 (16%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEYY 304
P+V + + +G T + + C D+ +L F + + + V H I S +
Sbjct: 672 PMVLISNQYARGATEIFVHCQDQAQL-FARIAQMLSQKKVSIHDAQILTSDHGLVLDSFI 730
Query: 305 IRHVDGNPISSE--------------AERQRVIN-----CLEAAIKRRTS---------E 336
I ++G P+ E A+ ++V N A KR+T
Sbjct: 731 ITEMNGEPLDDERSEQIQSALVKTLLADTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPN 790
Query: 337 GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETI 396
+ EL DR GLL+ + IF + L++ A++TT G + V F+VV N +E
Sbjct: 791 QTAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGER-VEDFFVVSNQQNGALAEEE 849
Query: 397 ESVRKEIGLTIL 408
+++ K+ L +L
Sbjct: 850 QAMLKQHLLAML 861
>gi|452853079|ref|YP_007494763.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
gi|451896733|emb|CCH49612.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
Length = 867
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTL 186
T+ + D PGL + + L+ N++ A+++T A V+ E P+ L
Sbjct: 682 TLTIAALDSPGLFATIAGALALHGLNILAADIFTWKDGTAVDVFTVGEP-------PENL 734
Query: 187 ------AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGS 240
A++KR + Y G D ++S ++RR + + G
Sbjct: 735 FPHEVWARVKRSIGYARVGKLD---------IESRLEDRR---------NSPLTMKRPGP 776
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
R +P+VT+++ YTV+ + DR LFD TL ++ ++ A + A
Sbjct: 777 ---RLRPIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAA 833
Query: 301 QEYYIRHVDGNPISSEAERQRVINCL 326
++IR +G ++ A Q V L
Sbjct: 834 DIFHIRDTEGGKLTDSARLQAVHEAL 859
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+DN+++ T+I+V + ++ G L ++ + L +L L I A I++ D+FH+
Sbjct: 780 PIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIR 839
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G KL++ + + ++L
Sbjct: 840 DTEGGKLTDSARLQAVHEAL 859
>gi|85704123|ref|ZP_01035226.1| PII uridylyl-transferase [Roseovarius sp. 217]
gi|85671443|gb|EAQ26301.1| PII uridylyl-transferase [Roseovarius sp. 217]
Length = 921
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + NV+ A +T A+ V+ +A G P + D L +++ ++
Sbjct: 740 DHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDADGHPFES-DRLPRLRNMI 798
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
LKG+ R A S D K R + R +T ++
Sbjct: 799 QKTLKGEVVPREAIK--SRDKLKKRER---------------------AFRVPTHITFDN 835
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ YT++ + DRP LL+D TL + A + + +Y++ + G
Sbjct: 836 DGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFGLKF 895
Query: 314 SSEAERQRVINCLEAAIKRRTSEGI 338
SE++R + L AAI +EG+
Sbjct: 896 HSESKRAALERKLRAAI----AEGV 916
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLL D+TR N + + A + T G Q V+ FYV D G SE+
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFGLKFHSES 899
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +T DN + T+I+VD+ ++ G L +L + L ++ I A I++ GE +D F+V
Sbjct: 828 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K + +++ L
Sbjct: 888 KDMFGLKFHSESKRAALERKL 908
>gi|449017425|dbj|BAM80827.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 291
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 27/164 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P +T DN S AT + V +++G L +L L + L IRRA + D F VT
Sbjct: 82 PSITADNESQYYATRLVVTCRDRKGLLSDLTDALKSIGLQIRRAVARTKDGIASDEFFVT 141
Query: 84 DQNGNKLSEDD---VSERIQQSLG----------------PRARS---FRSLRRSVGV-- 119
++G++LS+ D V + +Q +G P +S F R V V
Sbjct: 142 -RDGSQLSDTDLDAVEQALQPVMGTSGPTCPVPQNTERRLPAPQSPVRFVDHNRGVHVYV 200
Query: 120 --QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTH 161
A+ +TTI + DRP LL+E+ VL +L+ N+ A + T+
Sbjct: 201 DNHASQHYTTITVNAPDRPNLLNEIIDVLHELELNITFACLSTY 244
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS---DGEWFMDVFH 81
V VDN +++ T I V++ ++ L E++ VL++L+L I A +S+ + ++ D+FH
Sbjct: 197 HVYVDNHASQHYTTITVNAPDRPNLLNEIIDVLHELELNITFACLSTYADENKYRHDIFH 256
Query: 82 VTDQNGNKL 90
VT +G ++
Sbjct: 257 VTTMSGEQV 265
>gi|404317041|ref|ZP_10964974.1| PII uridylyl-transferase [Ochrobactrum anthropi CTS-325]
Length = 934
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLS 91
D G+K+S
Sbjct: 894 DLVGHKIS 901
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
I+R LL VL G+ ++
Sbjct: 906 QGNIRRKLLGVLSGENGSKT 925
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 904
>gi|340028705|ref|ZP_08664768.1| PII uridylyl-transferase [Paracoccus sp. TRP]
Length = 928
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + N++ A +T A+ V+ +A G P D L +++ ++
Sbjct: 738 DHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYAS-DRLPRLRAMI 796
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
LKG+ R A ADRD + ++ R +T ++
Sbjct: 797 QRTLKGEIVAREA-------------------LADRDK----PKKRESAFRFPTHITFDN 833
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
YTV+ + DRP LL+D TL D + A + + +Y++ + G +
Sbjct: 834 EASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFGLKL 893
Query: 314 SSEAERQRVINCLEAAIK 331
+ R+ + L AIK
Sbjct: 894 HQQNRREALEKKLRQAIK 911
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +T DN ++ T+I+VD+ ++ G L +L + L D + I A I++ G +D F+V
Sbjct: 826 PTHITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G KL + + E +++ L
Sbjct: 886 KDMFGLKLHQQNRREALEKKL 906
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+E+ DR GLL D+TR +N + + A + T G+Q V+ FYV D G
Sbjct: 842 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFG 890
>gi|283835229|ref|ZP_06354970.1| protein-P-II uridylyltransferase [Citrobacter youngae ATCC 29220]
gi|291068940|gb|EFE07049.1| protein-P-II uridylyltransferase [Citrobacter youngae ATCC 29220]
Length = 890
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQEY 303
+PL+ + +G T + + PDRP LF AVC D + + H I + + A +
Sbjct: 694 EPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTF 752
Query: 304 YIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS----------------------- 339
+ DG+P+SS+ R I LE AI +R+ +
Sbjct: 753 IVLEPDGSPLSSD--RHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPTH 810
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A + +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATADRRALNN 870
Query: 394 ETIESVRKEI 403
E + V + +
Sbjct: 871 ELQQEVHQRL 880
>gi|390436901|ref|ZP_10225439.1| PII uridylyl-transferase [Pantoea agglomerans IG1]
Length = 884
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 42/226 (18%)
Query: 218 ERRLHQMMYADR-DYDMNYAESGSA--------SGRSKPLVTVESCTDKGYTVVNLRCPD 268
E RLHQ+ R DY + + + A KPLV V +G T + + PD
Sbjct: 651 EERLHQIWNRCRADYFLRHTPNQIAWHARHLLVHDLKKPLVLVSPQATRGGTEIFIWSPD 710
Query: 269 RPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQEYYIRHVDGNPISSEAERQRVINCL 326
RP L F AV D + + H I S + A + + DG+P+S + +I L
Sbjct: 711 RPHL-FAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLSPD-RHPMIIQAL 768
Query: 327 EAAIK---------RRTSEGIS--------------------LELCCEDRAGLLSDVTRI 357
E AI RR S + LEL D+ GLL+ V +
Sbjct: 769 EQAITQSEWAPPRTRRPSAKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEV 828
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEI 403
F + G+S+ A ++T G + ++F + ++ + E +++R+ +
Sbjct: 829 FADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRKALRQRL 874
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 27/190 (14%)
Query: 3 CWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
W + +V + +K P V V + R T I + S ++ + L+ +L
Sbjct: 675 AWHARHLLVHDLKK-------PLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNL 727
Query: 63 IIRRAYI--SSDGEWFMDVFHVTDQNGNKLSEDD---VSERIQQSL------GPRARSFR 111
+ A I S DG MD F V + +G+ LS D + + ++Q++ PR R
Sbjct: 728 SVHDAQIFTSRDGM-AMDTFIVLEPDGSPLSPDRHPMIIQALEQAITQSEWAPPRTRRPS 786
Query: 112 SLRRSVGVQAALE----HTT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS 163
+ R V + HT +EL D+PGLL+ V V +DL ++ GA + T
Sbjct: 787 AKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGE 846
Query: 164 RMASVVYITS 173
R+ + + +
Sbjct: 847 RVEDLFILAN 856
>gi|372276073|ref|ZP_09512109.1| PII uridylyl-transferase [Pantoea sp. SL1_M5]
Length = 884
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 42/226 (18%)
Query: 218 ERRLHQMMYADR-DYDMNYAESGSA--------SGRSKPLVTVESCTDKGYTVVNLRCPD 268
E RLHQ+ R DY + + + A KPLV V +G T + + PD
Sbjct: 651 EERLHQIWNRCRADYFLRHTPNQIAWHARHLLVHDLKKPLVLVSPQATRGGTEIFIWSPD 710
Query: 269 RPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQEYYIRHVDGNPISSEAERQRVINCL 326
RP L F AV D + + H I S + A + + DG+P+S + +I L
Sbjct: 711 RPHL-FAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLSPD-RHPMIIQAL 768
Query: 327 EAAIK---------RRTSEGIS--------------------LELCCEDRAGLLSDVTRI 357
E AI RR S + LEL D+ GLL+ V +
Sbjct: 769 EQAITQSEWAPPRTRRPSAKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEV 828
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEI 403
F + G+S+ A ++T G + ++F + ++ + E +++R+ +
Sbjct: 829 FADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRKALRQRL 874
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 27/190 (14%)
Query: 3 CWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
W + +V + +K P V V + R T I + S ++ + L+ +L
Sbjct: 675 AWHARHLLVHDLKK-------PLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNL 727
Query: 63 IIRRAYI--SSDGEWFMDVFHVTDQNGNKLSEDD---VSERIQQSL------GPRARSFR 111
+ A I S DG MD F V + +G+ LS D + + ++Q++ PR R
Sbjct: 728 SVHDAQIFTSRDGM-AMDTFIVLEPDGSPLSPDRHPMIIQALEQAITQSEWAPPRTRRPS 786
Query: 112 SLRRSVGVQAALE----HTT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS 163
+ R V + HT +EL D+PGLL+ V V +DL ++ GA + T
Sbjct: 787 AKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGE 846
Query: 164 RMASVVYITS 173
R+ + + +
Sbjct: 847 RVEDLFILAN 856
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 236 AESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE 295
A A+ ++ PL VE + T +++ DRP L D T+ + V A V
Sbjct: 655 ARQTGAAAQAAPLTPVEGLPVQA-TEISIAAADRPGLFADLAQTMAALGADVTDARVATT 713
Query: 296 SPEAYQEYYIRHVDGNPIS-SEAERQRVINCLEAAIKRRTSEG-IS-------------- 339
S + + R DG + +AE +R+ ++A K EG IS
Sbjct: 714 SEGVVLDVF-RVQDGAGLPYGQAEPRRLKALVDALEKAARGEGRISKAPAPAGNARKAAF 772
Query: 340 ------------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVF 381
+E+ DR GLL+ ++R+F + GL++ A V + G +AV+ F
Sbjct: 773 EVRPVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSF 832
Query: 382 YVVDASGNPVKSE 394
YVVD G + SE
Sbjct: 833 YVVDGKGRKITSE 845
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V VD+ ++ AT+++V A++ G L L +V +D L IR A+++S GE +D F+V
Sbjct: 776 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 835
Query: 84 DQNGNKL-SEDDVSE 97
D G K+ SE ++E
Sbjct: 836 DGKGRKITSEQRIAE 850
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 35 KATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHVTDQNGNKLSED 93
+AT I + +A++ G +L Q + L + A +++ E +DVF V D G +
Sbjct: 676 QATEISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQDGAGLPYGQA 735
Query: 94 DVSE----------------RIQQSLGPRARSFRS---LRRSVGV--QAALEHTTIELTG 132
+ RI ++ P + ++ +R V V A+ T +E++G
Sbjct: 736 EPRRLKALVDALEKAARGEGRISKAPAPAGNARKAAFEVRPVVMVDHHASETATVVEVSG 795
Query: 133 RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRL 192
DRPGLL+ + V SD N+ A V ++ R Y+ + G I +A+++
Sbjct: 796 ADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV-DGKGRKITSEQRIAELRTA 854
Query: 193 LLYVL 197
L VL
Sbjct: 855 LEAVL 859
>gi|170768427|ref|ZP_02902880.1| protein-P-II uridylyltransferase [Escherichia albertii TW07627]
gi|170122531|gb|EDS91462.1| protein-P-II uridylyltransferase [Escherichia albertii TW07627]
Length = 890
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S++ R VI LE + + T +
Sbjct: 752 FIVLEPDGSPLSTD--RHDVIRYGLEQVLTQSTWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTERKSFLELIALDQPGLLAQVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|317051031|ref|YP_004112147.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
gi|316946115|gb|ADU65591.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
Length = 897
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ D+ GLL D+TR+ GL++ A +TT Q V+VFYV D GN V SE IE
Sbjct: 829 VEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVDVFYVSDLKGNKVLSEERIEG 888
Query: 399 VRKEIG 404
+++++G
Sbjct: 889 IKEQVG 894
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
L+ + RV V N + K T+++V + +K G L +L ++L L L I A I+++ E +D
Sbjct: 809 LKKDFSRVFVHNDQSEKYTVVEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVD 868
Query: 79 VFHVTDQNGNKLSEDDVSERIQQSLG 104
VF+V+D GNK+ ++ E I++ +G
Sbjct: 869 VFYVSDLKGNKVLSEERIEGIKEQVG 894
>gi|433090513|ref|ZP_20276826.1| [protein-PII] uridylyltransferase [Escherichia coli KTE138]
gi|431616286|gb|ELI85353.1| [protein-PII] uridylyltransferase [Escherichia coli KTE138]
Length = 890
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQAMRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|359780511|ref|ZP_09283737.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
gi|359371823|gb|EHK72388.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
Length = 899
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 24 PRVTVDNTSNRKA---TLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R + T I + +A++ V V++ L+L I+ A I+S ++ +D
Sbjct: 689 PLVLIRETTQRDSEGGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + + RI Q G + + + R V Q L+H
Sbjct: 749 YIVLDTDGGSIGNN--PARIAQIRGGLIEALKHPEEYPSIINRRVTRQ--LKHFAFSPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ IELT DRPGLL+ V + D +V+ A++ T R+ V Y+T +A
Sbjct: 805 NIYTDTMRSASLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
G P+ DP + ++ L+ L G+ D ++ + +S+
Sbjct: 864 DGRPLADPGLCSALQHALIKQL-GEPDSQTPLSRISI 899
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+EL DR GLL+ V RIF + LSV A++ T G + +VFYV DA G P+
Sbjct: 817 IELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTDADGRPL 868
>gi|416895514|ref|ZP_11925415.1| protein-P-II uridylyltransferase [Escherichia coli STEC_7v]
gi|417112331|ref|ZP_11964454.1| protein-P-II uridylyltransferase [Escherichia coli 1.2741]
gi|422802518|ref|ZP_16851011.1| protein-P-II uridylyltransferase [Escherichia coli M863]
gi|323964941|gb|EGB60407.1| protein-P-II uridylyltransferase [Escherichia coli M863]
gi|327255145|gb|EGE66748.1| protein-P-II uridylyltransferase [Escherichia coli STEC_7v]
gi|386143115|gb|EIG84251.1| protein-P-II uridylyltransferase [Escherichia coli 1.2741]
Length = 890
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHDVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|30173092|sp|Q8RQD1.1|GLND_AZOBR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|19421768|gb|AAL87737.1|AF149716_1 uridylyltransferase [Azospirillum brasilense]
Length = 933
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+V+ ++ G L +L + L +L L I A IS+ GE +DVF+V
Sbjct: 844 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++ ++ +I++ L
Sbjct: 904 KDVFGLKVTHENKLAQIRERL 924
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 61 DLIIRRAYISSDGEWFMDVFHVTD-------QNGNKLSEDDVSERIQQSLGPRARSFRSL 113
D++ R + ++G +DVF V D ++G+KL++ +S I++ L + + L
Sbjct: 771 DIVDARIFTMTNG-MALDVFTVQDAAGGGAFESGDKLAK--LSVMIEKVLSGQLKPLHDL 827
Query: 114 ------------------RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R + A+ HT IE+ GRDRPGLL ++ L++L +
Sbjct: 828 TKRKAPHASRTRVFHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISS 887
Query: 156 AEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
A++ T+ + V Y+ + GL + + LA+I+ LL+ L
Sbjct: 888 AKISTYGEKAIDVFYV-KDVFGLKVTHENKLAQIRERLLHAL 928
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 27/206 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL-PIDDPD 184
T + + D GL S + L+ +++ A ++T + MA V+ +A G + D
Sbjct: 745 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 804
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
LAK+ ++ VL G T + R H
Sbjct: 805 KLAKLSVMIEKVLSGQLKPLHDLTKRKAPHASRTRVFH---------------------- 842
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P V +++ +TV+ + DRP LL+D LT++ + A + +A +Y
Sbjct: 843 VPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFY 902
Query: 305 IRHVDGNPISSEAE----RQRVINCL 326
++ V G ++ E + R+R+++ L
Sbjct: 903 VKDVFGLKVTHENKLAQIRERLLHAL 928
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL D+TR L ++ A+++T G +A++VFYV D G V E
Sbjct: 860 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFGLKVTHE 914
>gi|302833812|ref|XP_002948469.1| hypothetical protein VOLCADRAFT_45231 [Volvox carteri f.
nagariensis]
gi|300266156|gb|EFJ50344.1| hypothetical protein VOLCADRAFT_45231 [Volvox carteri f.
nagariensis]
Length = 199
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +DN + AT++ V+ K G LL+ + L +L L IRRA +++ G F++T
Sbjct: 3 PTVKIDNIRDPFATVLTVEYGEKTGELLDAITALKNLGLNIRRAKVNTGGT----TFYIT 58
Query: 84 DQNGNKLSEDDVSERIQQS--------------------------LGPRARSFRSLRRSV 117
D D SE+I +S +G ++ + +
Sbjct: 59 DA--------DTSEKIVKSARLEDIRMTVLNSLVAKFPEVGEALSVGAKSNDLDG-NKVL 109
Query: 118 GVQAALEHTTIELT-------------GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSR 164
G + + TTI++ DRPGLL ++ VL D+ NV+ AE+ T +
Sbjct: 110 GTRRKVVQTTIDIVEASNGSCSVLKIVTSDRPGLLVDIVRVLKDINLNVVSAEIDTEGTL 169
Query: 165 MASVVYITSEATGLPIDDP 183
+IT G P+ P
Sbjct: 170 AKDEFFITYH--GEPLTTP 186
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 280 LTDMQYVVYHATVIAESPEAYQEYYI----RHVDGNPISSEAERQRVINCLEAAIKRRTS 335
L D++ V ++ ++A+ PE + + +DGN + R++V+ ++
Sbjct: 72 LEDIRMTVLNS-LVAKFPEVGEALSVGAKSNDLDGNKVL--GTRRKVVQTTIDIVEASNG 128
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
L++ DR GLL D+ R+ ++ L+V AE+ T G+ A + F++ G P+ +
Sbjct: 129 SCSVLKIVTSDRPGLLVDIVRVLKDINLNVVSAEIDTEGTLAKDEFFIT-YHGEPLTTPM 187
Query: 396 IESV 399
+ V
Sbjct: 188 VTLV 191
>gi|337264724|ref|YP_004608779.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
gi|336025034|gb|AEH84685.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
Length = 933
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
+ IE+ G DRPGLLSE+ LSDL ++ A + T ++ Y+T + TG ID P
Sbjct: 847 SVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVT-DLTGQKIDSPAR 905
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVD 213
+A I+ L+ L+G +R + +
Sbjct: 906 IATIRNRLIATLEGAAPERGGRAKAAAE 933
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPR + N + + ++I+V+ ++ G L E+ + L+DL L I A+I++ GE +D F+V
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 83 TDQNGNKL 90
TD G K+
Sbjct: 893 TDLTGQKI 900
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DR GLLS++TR + L + A +TT G + ++ FYV D +G + S I +
Sbjct: 849 IEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIAT 908
Query: 399 VRKEIGLTILRVKDDAYSKSPPQESGR 425
+R + T+ + P+ GR
Sbjct: 909 IRNRLIATL--------EGAAPERGGR 927
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 27/212 (12%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T I + +D P LLS + + N++ A+++T + A + S D+
Sbjct: 736 TEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILISREFDRDEDERRR 795
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
++ RL+ VL G + ++ K RR GS +
Sbjct: 796 AERVGRLIEDVLSG-----KSWLPEMIEKRTKPRR------------------GSKVFKI 832
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P + + ++V+ + DRP LL + TL+D+ + A + + +Y+
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 306 RHVDGNPISSEAE----RQRVINCLEAAIKRR 333
+ G I S A R R+I LE A R
Sbjct: 893 TDLTGQKIDSPARIATIRNRLIATLEGAAPER 924
>gi|449446279|ref|XP_004140899.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 287
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 26/163 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+ AT+++V ++ G+L++ ++ L DL L + + +S++G F++T
Sbjct: 81 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 140
Query: 84 D-QNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAA--------LEHTT 127
+G K+ + D+ E I+ ++ P + ++ + G+Q H
Sbjct: 141 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 200
Query: 128 IELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
++ G DRPGLL EV +L+D+ +V AE+ T
Sbjct: 201 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDT 243
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 25/209 (11%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E++ DR G L + L DL +V V T S + Y+T +G ++DPD
Sbjct: 94 TIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVEDPDL 153
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
L I+ ++ L + S A+ + E++L D D+ A G
Sbjct: 154 LESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL--------DVDIATHVHVKADG 205
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ L+ +E+ DRP LL + + L D+ V A + E A ++
Sbjct: 206 PKRSLLYLETA-------------DRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKF 252
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKR 332
++ + G + + Q V+NCL ++R
Sbjct: 253 HVSY--GGAALNSSLSQVVVNCLRYYLRR 279
>gi|303288045|ref|XP_003063311.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455143|gb|EEH52447.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 358
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 39 IKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW---FMDVFHVTDQNGNKLSEDDV 95
++V +K G ++ + L D L+ + ++DG+W + V +T + N ++DD
Sbjct: 1 VRVTCPDKTGLAADIARTLFDFGLVTVKGDFATDGKWAFVLVTVKKLTLSSMNLAAQDDP 60
Query: 96 SERIQQSLGPRARSFRSL----RRSVGV----QAALEHTTIELTGRDRPGLLSEVFAVLS 147
P +RS S S GV L T+E+ DR GLL +V L
Sbjct: 61 GGGSSPGF-PSSRSPSSHGLGDPSSAGVIEPKPGTLYILTVEV--EDRVGLLHDVTQELW 117
Query: 148 DLKCNVMGAEVWTHNSRMA-SVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSA 206
+ V A + T + +A + YIT E LP + +A+I + VL+G R A
Sbjct: 118 ACELTVHRAHISTSPADLAVDMFYITDERNELP--NEQRVAEISANVRAVLRGKRRSMDA 175
Query: 207 NTAV--SVDSTHKERRLHQMMYADRDYD-----MNYAESGSASGRSKPLVTVESCTDKGY 259
+ A +V + + + +R D + E+ SA+ S+ VTV++ K +
Sbjct: 176 SAAALGNVQISPAPHFVSKTRGGNRLLDHSGTALEKVETASAAHYSEATVTVDNLMSKAH 235
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV 292
TV +R DR LL+D + D++ + +A V
Sbjct: 236 TVFQMRTRDRKGLLYDVLRASKDLKVHISYAKV 268
>gi|237800142|ref|ZP_04588603.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022999|gb|EGI03056.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 898
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 35/202 (17%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 867
Query: 392 KSETIESVRKEIGLTILRVKDD 413
+ S +E + L V D
Sbjct: 868 SDPQLCSRLQEAIVKQLSVNSD 889
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q+++
Sbjct: 861 DANNQPLSDPQLCSRLQEAI 880
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 25/203 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSLG-------------PRARSFRSLRRSVGVQ- 120
+ V D G + + D+ E + ++L PR + V +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQP 866
Query: 180 IDDPDTLAKIKRLLLYVLKGDRD 202
+ DP ++++ ++ L + D
Sbjct: 867 LSDPQLCSRLQEAIVKQLSVNSD 889
>gi|88798256|ref|ZP_01113842.1| PII uridylyl-transferase [Reinekea blandensis MED297]
gi|88779032|gb|EAR10221.1| PII uridylyl-transferase [Reinekea sp. MED297]
Length = 893
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 106/273 (38%), Gaps = 47/273 (17%)
Query: 179 PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAES 238
PI+ D +A+ K L +L D +R A+ + Y R+ N A
Sbjct: 628 PINKEDRIAETKEAALLLLTEDGFEREDVLALWDNPGDD--------YFLRETPENIAWH 679
Query: 239 GSA---SGRSKPLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV 292
A G + PLV ++ + Y T + + PDR L D TL + + A +
Sbjct: 680 TRAIANHGINIPLVLIKETNVREYAGGTQLFIYAPDRAHLFADIAATLDALNLDIQDARI 739
Query: 293 IAESPEAYQ--EYYIRHVDGNPISSEAERQRVIN---CLE-------AAIKRRTSEGIS- 339
+ S + + + DG I +R I LE KRR S +
Sbjct: 740 MTSSASHFSLDTFIVLEQDGTSIGDNPDRLFEIQHKLLLEIQNPNDTQPPKRRISRQLKH 799
Query: 340 -------------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNV 380
+E+ DR GLL+D+ R FR L++ A ++T G +V
Sbjct: 800 FQIPAEITVSNDMVNHRTVVEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDV 859
Query: 381 FYVVDASGNPV-KSETIESVRKEIGLTILRVKD 412
F++VD G P+ S +E ++ E+ TI D
Sbjct: 860 FFLVDRQGLPLMNSSDVERLQNELKSTISEAMD 892
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 21 MNPPRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEW 75
+N P V + T+ R+ T + + + ++ ++ L+ L+L I+ A I SS +
Sbjct: 688 INIPLVLIKETNVREYAGGTQLFIYAPDRAHLFADIAATLDALNLDIQDARIMTSSASHF 747
Query: 76 FMDVFHVTDQNGNKLSED-DVSERIQQSL-----------GPRARSFRSLRR-------S 116
+D F V +Q+G + ++ D IQ L P+ R R L+ +
Sbjct: 748 SLDTFIVLEQDGTSIGDNPDRLFEIQHKLLLEIQNPNDTQPPKRRISRQLKHFQIPAEIT 807
Query: 117 VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEAT 176
V T +E+ DRPGLL+++ L+ ++ A + T + V ++ +
Sbjct: 808 VSNDMVNHRTVVEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDVFFLV-DRQ 866
Query: 177 GLPI 180
GLP+
Sbjct: 867 GLPL 870
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +TV N T+++V ++++ G L ++ + L+L + A IS+ GE DVF +
Sbjct: 803 PAEITVSNDMVNHRTVVEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDVFFL 862
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D+ G L ER+Q L
Sbjct: 863 VDRQGLPLMNSSDVERLQNEL 883
>gi|429108960|ref|ZP_19170730.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 507]
gi|426310117|emb|CCJ96843.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 507]
Length = 310
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 113 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 171
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 172 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 230
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 231 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 290
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 291 LLQQEVRQRL 300
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 112 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 171
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 172 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 231
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 232 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 288
>gi|429105301|ref|ZP_19167170.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 681]
gi|426292024|emb|CCJ93283.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 681]
Length = 891
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLSPD-RHEAIRQGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 871
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 872 LLQQEVRQRL 881
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 753 FIVLEPDGSPLSPDRHEAIRQGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 869
>gi|449494163|ref|XP_004159466.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 283
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 26/163 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+ AT+++V ++ G+L++ ++ L DL L + + +S++G F++T
Sbjct: 77 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 136
Query: 84 D-QNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAA--------LEHTT 127
+G K+ + D+ E I+ ++ P + ++ + G+Q H
Sbjct: 137 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 196
Query: 128 IELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
++ G DRPGLL EV +L+D+ +V AE+ T
Sbjct: 197 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDT 239
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 25/209 (11%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E++ DR G L + L DL +V V T S + Y+T +G ++DPD
Sbjct: 90 TIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVEDPDL 149
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
L I+ ++ L + S A+ + E++L D D+ A G
Sbjct: 150 LESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL--------DVDIATHVHVKADG 201
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ L+ +E+ DRP LL + + L D+ V A + E A ++
Sbjct: 202 PKRSLLYLETA-------------DRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKF 248
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKR 332
++ + G + + Q V+NCL ++R
Sbjct: 249 HVSY--GGAALNSSLSQVVVNCLRYYLRR 275
>gi|144900389|emb|CAM77253.1| Protein-P-II uridylyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 920
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ TLI+V+ ++ G L +L + L L I A+IS+ GE +DVF+V
Sbjct: 824 PPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYV 883
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ + E+I+ +
Sbjct: 884 KDIFGLKVQHERKLEQIRDGV 904
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T I + D PGL S++ ++ N++ A++ T + MA + E+ G D P
Sbjct: 726 TEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANGMALDSFWIQESDGAAFDTPSK 785
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
LAK+ ++ VL G M D++ A G R+
Sbjct: 786 LAKLSTVIEQVLSG------------------------RMRLDKEL---AARKGKLPARA 818
Query: 246 K-----PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
P V +++ +T++ + DRP LL+D +T + + A +
Sbjct: 819 HVFKVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVV 878
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIK 331
+Y++ + G + E + +++ + + A++
Sbjct: 879 DVFYVKDIFGLKVQHERKLEQIRDGVLKALR 909
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
+A+ HT IE+ GRDRPGLL ++ A ++ L + A + T+ R+ V Y+ + GL
Sbjct: 832 KASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYV-KDIFGLK 890
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSA 206
+ L +I+ +L L+ D +A
Sbjct: 891 VQHERKLEQIRDGVLKALRDPADSEAA 917
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 38/197 (19%)
Query: 241 ASGRSKPLVTVESCTD--KGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESP 297
A R PL TVES D + T +N+ D P L + + A ++ +
Sbjct: 706 AEQRHAPL-TVESRIDSFRSVTEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANG 764
Query: 298 EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRR------------------------ 333
A ++I+ DG + ++ ++ +E + R
Sbjct: 765 MALDSFWIQESDGAAFDTPSKLAKLSTVIEQVLSGRMRLDKELAARKGKLPARAHVFKVP 824
Query: 334 ---------TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVV 384
+S +E+ DR GLL D+T + GL + A ++T G + V+VFYV
Sbjct: 825 PRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYVK 884
Query: 385 DASGNPVKSE-TIESVR 400
D G V+ E +E +R
Sbjct: 885 DIFGLKVQHERKLEQIR 901
>gi|357160851|ref|XP_003578897.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 271
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+R AT++++ ++ G+LL+ ++ L DL L + + +++D FH+
Sbjct: 67 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 126
Query: 84 DQNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQA--------ALEHTTI 128
+ G K+ + D+ E I+ ++ P + ++ G++ H +
Sbjct: 127 -RLGRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDVATHVIV 185
Query: 129 ELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
E G DRPGLL EV +++D+ +V AE+ T
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDT 227
>gi|378824627|ref|YP_005187359.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
gi|365177679|emb|CCE94534.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
Length = 971
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ NT + K T+I+V+ ++ G L E+ VL+DL L I A+I++ GE +D F+VT
Sbjct: 853 PEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 84 DQNGNKLSEDD 94
D G K++ ++
Sbjct: 913 DLVGAKITNEN 923
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 88 NKLSEDDVS--ERIQQSLGPRARSF-RSLRRSVGVQAAL------EHTTIELTGRDRPGL 138
KL ED +S +R+ + + R R+ RS +V + L + T IE+ G DR GL
Sbjct: 819 GKLIEDVLSGRKRLPEVIASRTRAKKRSKAFTVTPEVTLSNTLSNKFTVIEVEGLDRTGL 878
Query: 139 LSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
LSEV AVLSDL ++ A + T ++ Y+T + G I + + I L VL
Sbjct: 879 LSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT-DLVGAKITNENRQINIAARLKAVLA 937
Query: 199 GDRDK 203
G+ D+
Sbjct: 938 GEVDE 942
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
DR GLLS+VT + + L + A +TT G + ++ FYV D G + +E
Sbjct: 874 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKITNE 922
>gi|374292182|ref|YP_005039217.1| [protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
gi|357424121|emb|CBS86988.1| [Protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
Length = 954
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+V+ ++ G L +L + L++L L I A +S+ GE +DVF+V
Sbjct: 841 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYV 900
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++ + +I++ L
Sbjct: 901 KDVFGLKVTHEGKLAKIKERL 921
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 61 DLIIRRAYISSDGEWFMDVFHVTD-------QNGNKLSE----------------DDVSE 97
D++ R + ++G +DVF V D ++G+KL++ +D+S
Sbjct: 768 DIVDARIFTMTNG-MALDVFSVQDAAGGGAFESGDKLAKLSVMIEKVLSGQLKPLNDLST 826
Query: 98 RIQQSLGPRARSFRSLRRS-VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGA 156
R + + R R F R + A+ HT IE+ GRDRPGLL ++ LS+L + A
Sbjct: 827 R-RTTQASRTRVFHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSA 885
Query: 157 EVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
+V T + V Y+ + GL + LAKIK LL L
Sbjct: 886 KVSTFGEKAIDVFYV-KDVFGLKVTHEGKLAKIKERLLSAL 925
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL D+TR L ++ A+V+T G +A++VFYV D G V E +
Sbjct: 857 IEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKDVFGLKVTHEGKLAK 916
Query: 400 RKEIGLTILRVKDDAYSKSPP 420
KE L+ L DD +PP
Sbjct: 917 IKERLLSAL---DDPSGDAPP 934
>gi|15238305|ref|NP_196094.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|7413536|emb|CAB86016.1| putative protein [Arabidopsis thaliana]
gi|9758449|dbj|BAB08978.1| unnamed protein product [Arabidopsis thaliana]
gi|18252933|gb|AAL62393.1| putative protein [Arabidopsis thaliana]
gi|21389645|gb|AAM48021.1| putative protein [Arabidopsis thaliana]
gi|332003394|gb|AED90777.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949480|gb|AEP31953.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 301
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D ++ +AT++++ N+ G+L++ ++ L DL L + + +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
++ G K+ + D+ E+I+ ++ P ++ + G++A + +++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
DRPGL+ E+ V++D+ +V AE+ T
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEG 259
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
E T ++L+ +R G L + L DL +V+ V T S + IT TG ++DP
Sbjct: 106 EATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSITKRDTGRKVEDP 165
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
D L +I+ ++ L + S A+ + E+++ D D+
Sbjct: 166 DLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKI--------DVDIATHIHVKE 217
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
G + L+ +E+ DRP L+ + + + D+ V A + E A
Sbjct: 218 DGPKRSLLVIETA-------------DRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKD 264
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKR 332
++++ + G + + + Q ++NCL ++R
Sbjct: 265 KFHVSY-QGQAL-NRSLSQVLVNCLRYFLRR 293
>gi|402699411|ref|ZP_10847390.1| PII uridylyl-transferase [Pseudomonas fragi A22]
Length = 900
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD+N LS+ + R+Q+++
Sbjct: 861 TDENNQPLSDPQLCMRLQEAI 881
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A +I S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLEAA------IKRRTSEGIS------------ 339
YI + NP E R+ + L I+RR +
Sbjct: 749 YIVLDNDGETIGNNPARVERIRKGLTEALRNPDDYPNIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF+V D + P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVTDENNQPL 868
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 25/203 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVS-ERIQQSLG-----------------PRARSFRSLRRSVGVQ- 120
+ V D +G + + ERI++ L PR + V +
Sbjct: 749 YIVLDNDGETIGNNPARVERIRKGLTEALRNPDDYPNIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V ++T E P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVTDE-NNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRD 202
+ DP +++ ++ L D+D
Sbjct: 868 LSDPQLCMRLQEAIVEQLTVDKD 890
>gi|21592963|gb|AAM64912.1| unknown [Arabidopsis thaliana]
Length = 301
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 81/164 (49%), Gaps = 26/164 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D ++ +AT++++ N+ G+L++ ++ L DL L + + +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
++ G K+ + D+ E+I+ ++ P ++ + G++A + +++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWTH 161
DRPGL+ E+ V++D+ +V AE+ T
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTE 258
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
E T ++L+ +R G L + L DL +V+ V T S + IT TG ++DP
Sbjct: 106 EATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSITKRDTGRKVEDP 165
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
D L +I+ ++ L + S A+ + E+++ D D+
Sbjct: 166 DLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKI--------DVDIATHIHVKE 217
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
G + L+ +E+ DRP L+ + + + D+ V A + E A
Sbjct: 218 DGPKRSLLVIETA-------------DRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKD 264
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKR 332
++++ + G + + + Q ++NCL ++R
Sbjct: 265 KFHVSY-QGQAL-NRSLSQVLVNCLRYFLRR 293
>gi|350553297|ref|ZP_08922477.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodospira sibirica ATCC
700588]
gi|349791172|gb|EGZ45062.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodospira sibirica ATCC
700588]
Length = 898
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 36/194 (18%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYI 305
PLV V T +G T + L + P L A +T + + A +I S + + +
Sbjct: 703 PLVLVRQETARGSTEIFLYTDEHPNLFALATTAITRLSLNIVDARIITTRSGKTLDTFLV 762
Query: 306 RHVDGNPISSEAERQRVINCLEAAIK------------------------------RRTS 335
GNPIS E+ + + + L A++ +
Sbjct: 763 LEDPGNPISCESRLEEIGHTLADAVRYPERGPKPVVRAAPQRLRHFKVDTNIRFSPKTHY 822
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV---- 391
L + DR GLLS + + G+ V A++ T G Q +VFY+ D G P+
Sbjct: 823 NKTVLNITTVDRPGLLSCIGIALTQCGVKVYNAKIATAGEQVDDVFYITDLEGRPITDKK 882
Query: 392 -KSETIESVRKEIG 404
KS ++RK +G
Sbjct: 883 QKSMITHTLRKSLG 896
>gi|238763982|ref|ZP_04624938.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
gi|238697799|gb|EEP90560.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
Length = 892
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 31/181 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
+KPLV V +G T + + CPDRP L V L V+ A + A +
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTF 754
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEG-------------------------- 337
+ DG+P++ + +I+ L+ A+ R+ +
Sbjct: 755 IVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRISPKLRHFSVPTETNFLPTHN 813
Query: 338 ---ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D + E
Sbjct: 814 ERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADRDRRALSIE 873
Query: 395 T 395
T
Sbjct: 874 T 874
>gi|357510825|ref|XP_003625701.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
gi|355500716|gb|AES81919.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
Length = 405
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 153/358 (42%), Gaps = 35/358 (9%)
Query: 35 KATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDD 94
+ T+I V+ +K G +L +++ L I RA +S+DG+W VF V + + S
Sbjct: 19 ETTIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVGKEKTRWSL-- 76
Query: 95 VSERIQQSLG--PRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCN 152
+ +R+ + A F + Q + ++ +DR GLL +V VL +L+
Sbjct: 77 LKKRLIAACPTCSSASGFSYFCSDLQNQKPPDVFLLKFCCKDRKGLLHDVTEVLCELELT 136
Query: 153 VMGAEV-WTHNSRMASVVYITSEATGLPID--DPDTLAKIKRLL--LYVLKGDRDKRSAN 207
+ +V T + ++ + +IT L + DT+ K+ +L +
Sbjct: 137 IKKVKVSTTPDGKVLDLFFITDTRELLHTEKRKDDTIEKLTTVLEDFFTTIDIELVGPET 196
Query: 208 TAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCP 267
TA S S+ + + +D+ +SG+++ S +V +++ +T+V + C
Sbjct: 197 TAFSQPSSSLPNAITDV------FDL---QSGTSTSDSVSIV-MDNTLSPAHTLVQIMCQ 246
Query: 268 DRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE--YYIRHVDGNPISSEAERQRVINC 325
D LL+D + TL D + + ++ P E +I VDG I ++++ + +
Sbjct: 247 DHKGLLYDIMRTLKDFNIQISYGR-FSKKPRGKCEIDLFIMQVDGKKIVDPSKKESLSSR 305
Query: 326 LEAAIKRRTSEGI-------------SLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
L+ + R + +EL + R + D+T + GL + AEV
Sbjct: 306 LKTELLRPLRVAVVSRGPDTQLLVANPVELSGKGRPLVFYDITLALKMLGLCIFSAEV 363
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 16/141 (11%)
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI-------------R 306
T++ + CPD+ L D + + A V + Y +++ R
Sbjct: 21 TIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVGKEKTRWSLLKKR 80
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366
+ P S A C + ++ + L+ CC+DR GLL DVT + E L++
Sbjct: 81 LIAACPTCSSASGFSYF-CSDLQ-NQKPPDVFLLKFCCKDRKGLLHDVTEVLCELELTIK 138
Query: 367 RAEV-TTRGSQAVNVFYVVDA 386
+ +V TT + +++F++ D
Sbjct: 139 KVKVSTTPDGKVLDLFFITDT 159
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD--GEWFMDVFHVT 83
+ +DNT + TL+++ + +G L ++++ L D ++ I S G+ +D+F +
Sbjct: 228 IVMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKPRGKCEIDLF-IM 286
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAA----LEHTTIELTGRDRPGLL 139
+G K+ + E + L + R LR +V + L +EL+G+ RP +
Sbjct: 287 QVDGKKIVDPSKKESLSSRL--KTELLRPLRVAVVSRGPDTQLLVANPVELSGKGRPLVF 344
Query: 140 SEVFAVLSDLKCNVMGAEVWTH 161
++ L L + AEV H
Sbjct: 345 YDITLALKMLGLCIFSAEVGRH 366
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9.1|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
S+ Q + +T IE++G DRPGLL E+ +S L N+ A V T R V Y+T +
Sbjct: 840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DL 898
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGD 200
G I+ P A IK LL++L D
Sbjct: 899 LGAQINAPTRQAAIKSALLHLLASD 923
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V+++N + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E +I + SE + +E+ DR GLL ++T + L++ A V T G +A +VFYV D
Sbjct: 838 EVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 386 ASGNPVKSETIESVRKEIGLTILRVKDDA 414
G + + T ++ K L +L D A
Sbjct: 898 LLGAQINAPTRQAAIKSALLHLLASDDTA 926
>gi|197248735|ref|YP_002145219.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|440762728|ref|ZP_20941780.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440767228|ref|ZP_20946211.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440772207|ref|ZP_20951114.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|238690064|sp|B5F8S8.1|GLND_SALA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|197212438|gb|ACH49835.1| protein-P-II uridylyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|436419424|gb|ELP17300.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436420880|gb|ELP18734.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436422451|gb|ELP20288.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
Length = 890
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 35/174 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SQPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DGNP++ A+R VI LE I +R+ +
Sbjct: 752 FIVLEPDGNPLA--ADRHDVIRTGLEQTITQRSWQPPQPRRQPAKLRHFTVETEVNFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
+EL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A
Sbjct: 810 HTDRKSFMELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATA 863
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSQPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPRAR--SFRSLRRSVGVQAALEH 125
F V + +GN L+ E +++R Q PR + R V H
Sbjct: 751 TFIVLEPDGNPLAADRHDVIRTGLEQTITQRSWQPPQPRRQPAKLRHFTVETEVNFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFMELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIAT 862
>gi|432375091|ref|ZP_19618114.1| [protein-PII] uridylyltransferase [Escherichia coli KTE11]
gi|430892349|gb|ELC14841.1| [protein-PII] uridylyltransferase [Escherichia coli KTE11]
Length = 890
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S++ R VI LE + +
Sbjct: 752 FIVLEPDGSPLSTD--RHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|365884301|ref|ZP_09423359.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
gi|365287146|emb|CCD95890.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
Length = 931
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
S+ Q + +T IE++G DRPGLL E+ +S L N+ A V T R V Y+T +
Sbjct: 840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DL 898
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGD 200
G I+ P A IK LL++L D
Sbjct: 899 LGAQINAPTRQAAIKSALLHLLASD 923
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V+++N + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E +I + SE + +E+ DR GLL ++T + L++ A V T G +A +VFYV D
Sbjct: 838 EVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 386 ASGNPVKSETIESVRKEIGLTILRVKDDAYSK 417
G + + T ++ K L +L DDA ++
Sbjct: 898 LLGAQINAPTRQAAIKSALLHLL-ASDDAAAQ 928
>gi|418296832|ref|ZP_12908675.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539007|gb|EHH08249.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 942
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N + K T+I+V+ ++ G L ++ V+ DL L I A I++ GE +D F+V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G K++ D+ I Q L
Sbjct: 886 TDLFGQKVTNDNRQASIAQRL 906
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V ++
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTND 896
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 41/90 (45%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V + + +TV+ + C DRP LL D + D+ ++ A + + +Y+
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ G ++++ + + L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|422645648|ref|ZP_16708783.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959197|gb|EGH59457.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 898
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 35/202 (17%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTYREFDGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 867
Query: 392 KSETIESVRKEIGLTILRVKDD 413
+ S +E + L V D
Sbjct: 868 SDPQLCSQLQEAIVKQLSVNPD 889
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + ++Q+++
Sbjct: 861 DANNQPLSDPQLCSQLQEAI 880
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTYREFDGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSLG-------------PRARSFRSLRRSVGVQ- 120
+ V D G + + D+ + + ++L PR + V +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQP 866
Query: 180 IDDPDTLAKIK 190
+ DP ++++
Sbjct: 867 LSDPQLCSQLQ 877
>gi|365892864|ref|ZP_09431099.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
gi|365331013|emb|CCE03630.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
Length = 931
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
S+ Q + +T IE++G DRPGLL E+ +S L N+ A V T R V Y+T +
Sbjct: 840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DL 898
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGD 200
G I+ P A IK LL++L D
Sbjct: 899 LGAQINAPTRQAAIKSALLHLLASD 923
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V+++N + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E +I + SE + +E+ DR GLL ++T + L++ A V T G +A +VFYV D
Sbjct: 838 EVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 386 ASGNPVKSETIESVRKEIGLTILRVKDDAYSK 417
G + + T ++ K L +L DDA ++
Sbjct: 898 LLGAQINAPTRQAAIKSALLHLL-ASDDAAAQ 928
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 98 RIQQSLGPRARSFRSLRRSVGVQAAL--------EHTTIELTGRDRPGLLSEVFAVLSDL 149
R+ +++ RA S ++ R+ V+ + +T IE++G DRPGLL ++ +S L
Sbjct: 816 RLPEAVARRATSSKTKLRAFVVEPEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKL 875
Query: 150 KCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL-KGDRDKRSA 206
N+ A V T R V Y+T + G I P A IKR L+++L GD +++ A
Sbjct: 876 NLNIASAHVATFGERARDVFYVT-DLLGAQITAPTRQAAIKRALVHLLANGDAEQKPA 932
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P ++++N + + T+I+V ++ G L +L ++ L+L I A++++ GE DVF+VT
Sbjct: 839 PEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
>gi|331124067|ref|ZP_04591947.2| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331026351|gb|EGI06406.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 322
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 35/202 (17%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 112 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 171
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 172 YIVLDHEGGSIGNNPERIQDIREGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 231
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 232 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 291
Query: 392 KSETIESVRKEIGLTILRVKDD 413
+ S +E + L V D
Sbjct: 292 SDPQLCSRLQEAIVKQLSVNSD 313
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 225 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 284
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q+++
Sbjct: 285 DANNQPLSDPQLCSRLQEAI 304
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 25/203 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 112 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 171
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSLG-------------PRARSFRSLRRSVGVQ- 120
+ V D G + + D+ E + ++L PR + V +
Sbjct: 172 YIVLDHEGGSIGNNPERIQDIREGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 231
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 232 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQP 290
Query: 180 IDDPDTLAKIKRLLLYVLKGDRD 202
+ DP ++++ ++ L + D
Sbjct: 291 LSDPQLCSRLQEAIVKQLSVNSD 313
>gi|389683284|ref|ZP_10174616.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
gi|388552797|gb|EIM16058.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
Length = 900
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD N +LS+ + R+Q ++
Sbjct: 861 TDANNQQLSDPQLCSRLQDAI 881
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I + +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQ 866
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRV-PRQLKHFAFPPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQ 866
Query: 179 PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
+ DP ++++ ++ L + +A T +++
Sbjct: 867 QLSDPQLCSRLQDAIVEQLSVSHEPPTALTRLNI 900
>gi|410089166|ref|ZP_11285792.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
gi|409763453|gb|EKN48413.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
Length = 899
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A +I S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP+ + R+ + L IKRR +
Sbjct: 749 YIVLDNEGGSIGDNPVRVQEIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA +P+
Sbjct: 809 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNHPL 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 50/80 (62%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + + LS+ + R+Q+++
Sbjct: 862 DADNHPLSDPQLCSRLQEAI 881
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 33/199 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + ++ V R+Q+ + R+ ++R V Q L+H
Sbjct: 749 YIVLDNEGGSIGDNPV--RVQEIREGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 805 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLL 194
P+ DP ++++ ++
Sbjct: 864 DNHPLSDPQLCSRLQEAII 882
>gi|219872237|ref|YP_002476612.1| PII uridylyl-transferase [Haemophilus parasuis SH0165]
gi|219692441|gb|ACL33664.1| uridylyltransferase [Haemophilus parasuis SH0165]
Length = 858
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDVFHV 82
P V + N R AT I V ++ + Q L+ + I A I +SD +D F +
Sbjct: 666 PMVLISNQYARGATEIFVHCQDQAQLFARIAQTLSQKKVSIHDAQILTSDHGLVLDSFII 725
Query: 83 TDQNGNKLSEDDVSERIQQS-----LGPRARSFRSLRRSVGVQAALEHTTI--------- 128
T+ NG L +D+ SE+IQ + L + F ++SV QA T I
Sbjct: 726 TEMNGEPL-DDERSEQIQSALVKTLLANTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPN 784
Query: 129 ----ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
EL DR GLL+++ + LK N++ A++ T R+ ++++ G ++
Sbjct: 785 QTAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGERVEDFFVVSNQQNGALAEEEQ 844
Query: 185 TLAKIKRLLLYVLKGD 200
A +K+ LL +L+ +
Sbjct: 845 --AMLKQHLLAMLEQE 858
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYI 305
P+V + + +G T + + C D+ +L TL+ + ++ A ++ ++ + I
Sbjct: 666 PMVLISNQYARGATEIFVHCQDQAQLFARIAQTLSQKKVSIHDAQILTSDHGLVLDSFII 725
Query: 306 RHVDGNPISSE--------------AERQRVIN-----CLEAAIKRRTS---------EG 337
++G P+ E A ++V N A KR+T
Sbjct: 726 TEMNGEPLDDERSEQIQSALVKTLLANTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPNQ 785
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+ EL DR GLL+ + IF + L++ A++TT G + V F+VV N +E +
Sbjct: 786 TAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGER-VEDFFVVSNQQNGALAEEEQ 844
Query: 398 SVRKEIGLTIL 408
++ K+ L +L
Sbjct: 845 AMLKQHLLAML 855
>gi|297810567|ref|XP_002873167.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319004|gb|EFH49426.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 81/164 (49%), Gaps = 26/164 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D ++ +AT++++ N+ G+L++ ++ L DL L + + +S++G+ F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRSLKDLGLDVIKGTVSTEGDVKQTKFSIT 154
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
++ G K+ + D+ E+I+ ++ P ++ + G++A +++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPENKIDVDIATHIL 214
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWTH 161
DRPGL+ E+ V++D+ +V AE+ T
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADINIDVESAEIDTE 258
>gi|23012593|ref|ZP_00052640.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 654
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V++DN + + T++++ ++ G L EL LN L L I A++++ GE +DVF+V
Sbjct: 546 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 605
Query: 83 TDQNGNKLSEDD 94
TD G ++ + D
Sbjct: 606 TDLTGTRVMQPD 617
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+TG DRPGLL E+ L+ L N+ A V T R V Y+T + TG + PD
Sbjct: 560 TVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVT-DLTGTRVMQPDR 618
Query: 186 LAKIKRLLLYVLKGD 200
LA I+ ++ V D
Sbjct: 619 LAMIRAAVMEVFASD 633
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLL ++T L++T A V T G +AV+VFYV D +G P +
Sbjct: 562 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVMQPDRLAM 621
Query: 396 IESVRKEI---GLTILRVKD-DAYSKSPP 420
I + E+ + LR + DA SPP
Sbjct: 622 IRAAVMEVFASDVAALRAEGLDALVDSPP 650
>gi|188579682|ref|YP_001923127.1| PII uridylyl-transferase [Methylobacterium populi BJ001]
gi|179343180|gb|ACB78592.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium populi BJ001]
Length = 928
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V++DN + + T++++ ++ G L EL LN L L I A++++ GE +DVF+V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 879
Query: 83 TDQNGNKLSEDD 94
TD G ++ + D
Sbjct: 880 TDLTGTRVMQPD 891
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+TG DRPGLL E+ L+ L N+ A V T R V Y+T + TG + PD
Sbjct: 834 TVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVT-DLTGTRVMQPDR 892
Query: 186 LAKIKRLLLYVLKGD 200
LA I+ ++ V D
Sbjct: 893 LAMIRAAVMEVFASD 907
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLL ++T L++T A V T G +AV+VFYV D +G P +
Sbjct: 836 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVMQPDRLAM 895
Query: 396 IESVRKEI---GLTILRVKD-DAYSKSPP 420
I + E+ + LR + DA SPP
Sbjct: 896 IRAAVMEVFASDVAALRAEGLDALVDSPP 924
>gi|269127631|ref|YP_003301001.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
gi|268312589|gb|ACY98963.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
Length = 780
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 37/182 (20%)
Query: 262 VNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--------AYQEYYIRHVDGNPI 313
V + PDRP LL+ L + VV A V A + A EY +P
Sbjct: 602 VTVAVPDRPGLLWRTAGVLALHRLVVRTARVFASAGAGTAVLDFTAVPEY---GTPPDPA 658
Query: 314 SSEAERQR-------VINCLEAA-------------------IKRRTSEGISLELCCEDR 347
+ EA+ +R V LE ++ + +E+ DR
Sbjct: 659 ALEADLRRMLAGRLDVAGLLERRAAAVRRRPGAPVPPPRVTIVEDASDTATVVEVRAHDR 718
Query: 348 AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTI 407
GLL + + GL V +A V T G++AV+VFYVVDA G P++ S +E L
Sbjct: 719 PGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVFYVVDAQGRPLREPAALSALREKVLAA 778
Query: 408 LR 409
LR
Sbjct: 779 LR 780
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVF 80
+ PPRVT+ ++ AT+++V + ++ G L + Q + L + +A + + G +DVF
Sbjct: 693 VPPPRVTIVEDASDTATVVEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVF 752
Query: 81 HVTDQNGNKLSE 92
+V D G L E
Sbjct: 753 YVVDAQGRPLRE 764
>gi|26246113|ref|NP_752152.1| PII uridylyl-transferase [Escherichia coli CFT073]
gi|227884920|ref|ZP_04002725.1| PII uridylyl-transferase [Escherichia coli 83972]
gi|301049922|ref|ZP_07196845.1| protein-P-II uridylyltransferase [Escherichia coli MS 185-1]
gi|386627688|ref|YP_006147408.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i2']
gi|386632608|ref|YP_006152327.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i14']
gi|386637525|ref|YP_006104323.1| [protein-PII] uridylyltransferase [Escherichia coli ABU 83972]
gi|432410168|ref|ZP_19652855.1| [protein-PII] uridylyltransferase [Escherichia coli KTE39]
gi|432434715|ref|ZP_19677126.1| [protein-PII] uridylyltransferase [Escherichia coli KTE188]
gi|432493994|ref|ZP_19735816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE214]
gi|432510399|ref|ZP_19749259.1| [protein-PII] uridylyltransferase [Escherichia coli KTE220]
gi|432522308|ref|ZP_19759453.1| [protein-PII] uridylyltransferase [Escherichia coli KTE230]
gi|432567039|ref|ZP_19803571.1| [protein-PII] uridylyltransferase [Escherichia coli KTE53]
gi|432591169|ref|ZP_19827502.1| [protein-PII] uridylyltransferase [Escherichia coli KTE60]
gi|432606032|ref|ZP_19842232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE67]
gi|432649536|ref|ZP_19885306.1| [protein-PII] uridylyltransferase [Escherichia coli KTE87]
gi|432782054|ref|ZP_20016241.1| [protein-PII] uridylyltransferase [Escherichia coli KTE63]
gi|432976871|ref|ZP_20165698.1| [protein-PII] uridylyltransferase [Escherichia coli KTE209]
gi|432993923|ref|ZP_20182544.1| [protein-PII] uridylyltransferase [Escherichia coli KTE218]
gi|432998341|ref|ZP_20186891.1| [protein-PII] uridylyltransferase [Escherichia coli KTE223]
gi|433085818|ref|ZP_20272228.1| [protein-PII] uridylyltransferase [Escherichia coli KTE137]
gi|433114103|ref|ZP_20299928.1| [protein-PII] uridylyltransferase [Escherichia coli KTE153]
gi|433123764|ref|ZP_20309363.1| [protein-PII] uridylyltransferase [Escherichia coli KTE160]
gi|433137833|ref|ZP_20323127.1| [protein-PII] uridylyltransferase [Escherichia coli KTE167]
gi|433147585|ref|ZP_20332672.1| [protein-PII] uridylyltransferase [Escherichia coli KTE174]
gi|433211085|ref|ZP_20394709.1| [protein-PII] uridylyltransferase [Escherichia coli KTE99]
gi|442607303|ref|ZP_21022080.1| [Protein-PII] uridylyltransferase [Escherichia coli Nissle 1917]
gi|30173020|sp|Q8CY19.1|GLND_ECOL6 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|26106510|gb|AAN78696.1|AE016755_196 [Protein-PII] uridylyltransferase [Escherichia coli CFT073]
gi|227838058|gb|EEJ48524.1| PII uridylyl-transferase [Escherichia coli 83972]
gi|300298324|gb|EFJ54709.1| protein-P-II uridylyltransferase [Escherichia coli MS 185-1]
gi|307552017|gb|ADN44792.1| [protein-PII] uridylyltransferase [Escherichia coli ABU 83972]
gi|355418587|gb|AER82784.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i2']
gi|355423507|gb|AER87703.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i14']
gi|430938887|gb|ELC59112.1| [protein-PII] uridylyltransferase [Escherichia coli KTE39]
gi|430968200|gb|ELC85433.1| [protein-PII] uridylyltransferase [Escherichia coli KTE188]
gi|431029768|gb|ELD42799.1| [protein-PII] uridylyltransferase [Escherichia coli KTE214]
gi|431032542|gb|ELD45252.1| [protein-PII] uridylyltransferase [Escherichia coli KTE220]
gi|431055648|gb|ELD65187.1| [protein-PII] uridylyltransferase [Escherichia coli KTE230]
gi|431103618|gb|ELE08261.1| [protein-PII] uridylyltransferase [Escherichia coli KTE53]
gi|431133730|gb|ELE35697.1| [protein-PII] uridylyltransferase [Escherichia coli KTE60]
gi|431142300|gb|ELE44050.1| [protein-PII] uridylyltransferase [Escherichia coli KTE67]
gi|431194822|gb|ELE94037.1| [protein-PII] uridylyltransferase [Escherichia coli KTE87]
gi|431332947|gb|ELG20168.1| [protein-PII] uridylyltransferase [Escherichia coli KTE63]
gi|431483829|gb|ELH63518.1| [protein-PII] uridylyltransferase [Escherichia coli KTE209]
gi|431511661|gb|ELH89792.1| [protein-PII] uridylyltransferase [Escherichia coli KTE218]
gi|431516152|gb|ELH93766.1| [protein-PII] uridylyltransferase [Escherichia coli KTE223]
gi|431610721|gb|ELI80006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE137]
gi|431637630|gb|ELJ05685.1| [protein-PII] uridylyltransferase [Escherichia coli KTE153]
gi|431650976|gb|ELJ18283.1| [protein-PII] uridylyltransferase [Escherichia coli KTE160]
gi|431665866|gb|ELJ32575.1| [protein-PII] uridylyltransferase [Escherichia coli KTE167]
gi|431679248|gb|ELJ45161.1| [protein-PII] uridylyltransferase [Escherichia coli KTE174]
gi|431736508|gb|ELJ99833.1| [protein-PII] uridylyltransferase [Escherichia coli KTE99]
gi|441711443|emb|CCQ08057.1| [Protein-PII] uridylyltransferase [Escherichia coli Nissle 1917]
Length = 890
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
KPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 GKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|62288144|sp|Q89VX9.2|GLND_BRAJA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I+ P
Sbjct: 848 YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPT 906
Query: 185 TLAKIKRLLLYVLKGDR 201
+ IK L +V+ GD+
Sbjct: 907 RQSAIKSALTHVMAGDK 923
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 896 DLLGAQINAPTRQSAIKSAL 915
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T +S
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 400 RKEIGLTILRVKDDA 414
K LT + D A
Sbjct: 911 IKS-ALTHVMAGDKA 924
>gi|15010738|gb|AAK74028.1| At2g39570/F12L6.23 [Arabidopsis thaliana]
gi|23308377|gb|AAN18158.1| At2g39570/F12L6.23 [Arabidopsis thaliana]
Length = 411
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 150/354 (42%), Gaps = 28/354 (7%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT-DQNGNKLSEDDV 95
T++ V+ ++ G L +++ + L I RA S+DG W VF VT D + K+ D +
Sbjct: 21 TVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDSL 80
Query: 96 SERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R+ + SF +S V ++ RDR GLL +V VL++L+ +
Sbjct: 81 KNRLLSACPSCLGSFYFCLQS-NVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 156 AEVW-THNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS 214
+V T + R+ + +IT L T K L VL S ++
Sbjct: 140 VKVMTTPDGRVLDMFFITDAMDLLHTKQRQT--KTCDHLTAVLG--EHGVSCELELAGPE 195
Query: 215 THKERRLHQM--MYADRDYDMN-YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPK 271
+R + + AD + + + SGS+S +K ++TV++ +T++ +RC D+
Sbjct: 196 LESVQRFSSLPPLAADELFGPDGFDISGSSS--NKAVLTVDNQLSPAHTLLQIRCVDQKG 253
Query: 272 LLFDAVCTLTDMQYVVYHATVIAESPEAYQ--EYYIRHVDGNPISSEAE--------RQR 321
L +D + T D + + + + Y+ E ++R D N I ++
Sbjct: 254 LFYDILRTSKDCDVHIAYGR-FSSKVKGYRNLELFVRGTDENKIMDPKHQANFCARLKEE 312
Query: 322 VINCLEAAIKRRTSE-----GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
++ L I R + +EL + R + DVT + G+ + AE+
Sbjct: 313 MVCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEI 366
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP-ISSEAE 318
TVV + CPD L + + + A + Y +++ +P I ++
Sbjct: 21 TVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDSL 80
Query: 319 RQRVIN-----------CLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTR 367
+ R+++ CL++ + + S + L+ C DR GLL DVT++ E ++ R
Sbjct: 81 KNRLLSACPSCLGSFYFCLQSNVSKPPSLYL-LKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 368 AEV-TTRGSQAVNVFYVVDA 386
+V TT + +++F++ DA
Sbjct: 140 VKVMTTPDGRVLDMFFITDA 159
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
C D +GL S + RI E GLS+TRA+ +T G VF+V +P
Sbjct: 27 CPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSP 73
>gi|425298339|ref|ZP_18688397.1| protein-P-II uridylyltransferase [Escherichia coli 07798]
gi|408222086|gb|EKI45993.1| protein-P-II uridylyltransferase [Escherichia coli 07798]
Length = 890
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ + +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGSRITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|218688042|ref|YP_002396254.1| PII uridylyl-transferase [Escherichia coli ED1a]
gi|254798833|sp|B7MP27.1|GLND_ECO81 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218425606|emb|CAR06392.1| uridylyltransferase [Escherichia coli ED1a]
Length = 890
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
KPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 GKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|445129638|ref|ZP_21380898.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444852948|gb|ELX78021.1| PII uridylyl-transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 890
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 35/173 (20%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQEY 303
+PLV + +G T + +R PDRP LF AVC D + + H I + + A +
Sbjct: 694 QPLVLLSPQATRGGTEIFIRSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTF 752
Query: 304 YIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS----------------------- 339
+ DG+P++ A+R VI LE I +R+ +
Sbjct: 753 IVLEPDGSPLA--ADRHEVIRTGLEQTITQRSWQPPQPRRQPAKLRHFTVETEVNFLPTH 810
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
+EL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A
Sbjct: 811 TDRKSFMELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATA 863
>gi|422657758|ref|ZP_16720197.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331016365|gb|EGH96421.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 898
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 35/191 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 867
Query: 392 KSETIESVRKE 402
+ S +E
Sbjct: 868 SDPQLCSQLQE 878
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + ++Q+++
Sbjct: 861 DANNQPLSDPQLCSQLQEAI 880
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + + ERIQ + R+ ++R V Q L+H
Sbjct: 748 YIVLDHEGGSIGNN--PERIQDIRDGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 863 NNQPLSDPQLCSQLQ 877
>gi|398826993|ref|ZP_10585213.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
gi|398219320|gb|EJN05805.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
Length = 929
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I+ P
Sbjct: 848 YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPT 906
Query: 185 TLAKIKRLLLYVLKGDR 201
+ IK L +V+ GD+
Sbjct: 907 RQSAIKSALTHVMAGDK 923
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 896 DLLGAQINAPTRQSAIKSAL 915
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T +S
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 400 RKEIGLTILRVKDDA 414
K LT + D A
Sbjct: 911 IKS-ALTHVMAGDKA 924
>gi|329891103|ref|ZP_08269446.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
gi|328846404|gb|EGF95968.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
Length = 812
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 73 GEWFMDVFHVTDQ--NGNKLS-EDDVSERIQQSLGPRARSFRSLRRSVGVQAALEHTT-I 128
G+ +F T+ G+ ++ ED +++ +L RAR + ++ + LE T +
Sbjct: 535 GQLMRALFEATEALFRGDAVTREDPLAD--HPALVERARREGAAVEALPAEGPLESTARV 592
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID--DPDTL 186
+ RDRPGL +++ A LS +V+GA + T + MA V+ + G P +P L
Sbjct: 593 AVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGREPRRL 652
Query: 187 A-KIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
A +K + VLKG R ST + R+ +D+
Sbjct: 653 AILVKAMERAVLKGAR-----------TSTLEPPRVSARRAV---FDV------------ 686
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P+V +++ T V+ + DRP LL D T++ Y A V + A +YI
Sbjct: 687 RPVVRIDADTGTSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYI 746
Query: 306 RHVDGNPISSEA 317
DG S+A
Sbjct: 747 TDADGRKPKSKA 758
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+ + +E+ DR GLL+D+ R +G S A V + G +AV+ FY+ DA G KS+
Sbjct: 698 TSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDADGRKPKSK 757
Query: 395 T 395
Sbjct: 758 A 758
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 28/136 (20%)
Query: 10 VVDEFEKLVLR------MNPPRVT-------------VDNTSNRKATLIKVDSANKRGSL 50
+V E+ VL+ + PPRV+ +D + A +I+V A++ G L
Sbjct: 655 LVKAMERAVLKGARTSTLEPPRVSARRAVFDVRPVVRIDADTGTSAVVIEVSGADRPGLL 714
Query: 51 LELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSED--------DVSERIQQS 102
+L + ++ R A+++S GE +D F++TD +G K D+ E + ++
Sbjct: 715 ADLARTISAHGYSTRSAHVASFGERAVDGFYITDADGRKPKSKARLEALKVDLLEVLDRT 774
Query: 103 L-GPRARSFRSLRRSV 117
L GP R +R SV
Sbjct: 775 LQGPAGRRIVPVRASV 790
>gi|28868738|ref|NP_791357.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969116|ref|ZP_03397255.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301383989|ref|ZP_07232407.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato Max13]
gi|302061957|ref|ZP_07253498.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato K40]
gi|302134052|ref|ZP_07260042.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|38257473|sp|Q886P5.1|GLND_PSESM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28851977|gb|AAO55052.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926114|gb|EEB59670.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 898
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 35/191 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 867
Query: 392 KSETIESVRKE 402
+ S +E
Sbjct: 868 SDPQLCSQLQE 878
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + ++Q+++
Sbjct: 861 DANNQPLSDPQLCSQLQEAI 880
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + + ERIQ + R+ ++R V Q L+H
Sbjct: 748 YIVLDHEGGSIGNN--PERIQDIRDGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 863 NNQPLSDPQLCSQLQ 877
>gi|386311543|ref|YP_006007599.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|318606932|emb|CBY28430.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 892
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 31/181 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
+KPLV V +G T + + CPDRP L V L V+ A + A +
Sbjct: 695 TKPLVLVSRQATRGGTEIFICCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTF 754
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRRTSEG-------------------------- 337
+ DG+P++ + +I+ L+ A+ R+ +
Sbjct: 755 IVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHN 813
Query: 338 ---ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D + E
Sbjct: 814 ERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSIE 873
Query: 395 T 395
T
Sbjct: 874 T 874
>gi|27376027|ref|NP_767556.1| PII uridylyl-transferase [Bradyrhizobium japonicum USDA 110]
gi|27349166|dbj|BAC46181.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 110]
Length = 997
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
++ Q + +T IE++G DRPGLL E+ +S L N+ A V T R V Y+T +
Sbjct: 907 TINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DL 965
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDR 201
G I+ P + IK L +V+ GD+
Sbjct: 966 LGAQINAPTRQSAIKSALTHVMAGDK 991
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 904 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 963
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 964 DLLGAQINAPTRQSAIKSAL 983
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T +S
Sbjct: 919 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 978
Query: 400 RKEIGLTILRVKDDA 414
K LT + D A
Sbjct: 979 IKS-ALTHVMAGDKA 992
>gi|397687902|ref|YP_006525221.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
gi|395809458|gb|AFN78863.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
Length = 900
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T+I+V + ++ G L + Q+ + DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
T+ + LS+ + ++QQ+L
Sbjct: 861 TNADNQPLSDLQLCTQLQQAL 881
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 35/182 (19%)
Query: 245 SKPLVTVESCTD---KGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AY 300
S+PLV ++ T +G T + + D+ V + + ++ A +I S +
Sbjct: 687 SEPLVLIKETTQHEFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTL 746
Query: 301 QEYYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS---------- 339
Y + DG PI ++ ER Q + L A IKR +
Sbjct: 747 DTYIVLDADGAPIGNDPERIQEIRQGLTEALRNPEDYLTIIKRHVPRQLKHFAFPPQVTI 806
Query: 340 ----------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
+E+ DR GLL+ + ++F E LSV A++ T G + +VF+V +A
Sbjct: 807 HNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVTNADNQ 866
Query: 390 PV 391
P+
Sbjct: 867 PL 868
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 29/212 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI +A G PI +DP+
Sbjct: 705 TQIFIYAADQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGAPIGNDPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I++ L L+ D +++ H R+L +
Sbjct: 765 RIQEIRQGLTEALRNPEDY------LTIIKRHVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL + V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFF 859
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ + D P+S + Q +A +K+ + E
Sbjct: 860 VTNADNQPLS---DLQLCTQLQQALVKQLSQE 888
>gi|418470937|ref|ZP_13040863.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
gi|371548442|gb|EHN76681.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
Length = 146
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V VD+ ++ AT+++V A++ G L L +V +D L IR A+++S GE +D F+V
Sbjct: 22 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 81
Query: 84 DQNGNKL-SEDDVSE 97
D+ G K+ SE V+E
Sbjct: 82 DRKGRKITSEQRVAE 96
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL+ ++R+F + GL++ A V + G +AV+ FYVVD G + SE
Sbjct: 37 VEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDRKGRKITSE 91
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E++G DRPGLL+ + V SD N+ A V ++ R Y+ G I
Sbjct: 35 TVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDR-KGRKITSEQR 93
Query: 186 LAKIKRLLLYVL 197
+A+++ L VL
Sbjct: 94 VAELRAALEAVL 105
>gi|383775112|ref|YP_005454181.1| [protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
gi|381363239|dbj|BAL80069.1| [Protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
Length = 930
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I+ P
Sbjct: 848 YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPT 906
Query: 185 TLAKIKRLLLYVLKGDR 201
+ IK L +V+ GD+
Sbjct: 907 RQSAIKSALTHVMAGDK 923
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 896 DLLGAQINAPTRQSAIKSAL 915
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T +S
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 400 RKEIGLTILRVKDDAYS 416
K LT + D A +
Sbjct: 911 IKS-ALTHVMAGDKAVA 926
>gi|374578662|ref|ZP_09651758.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
gi|374426983|gb|EHR06516.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
Length = 929
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I P
Sbjct: 848 YTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQISAPT 906
Query: 185 TLAKIKRLLLYVLKGDR 201
+ IK L +V+ GD+
Sbjct: 907 RQSAIKSALTHVMAGDK 923
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+I++ ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G ++S I+ +L
Sbjct: 896 DLLGAQISAPTRQSAIKSAL 915
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T +S
Sbjct: 851 IEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQISAPTRQSA 910
Query: 400 RKEIGLTILRVKDDA 414
K LT + D A
Sbjct: 911 IKS-ALTHVMAGDKA 924
>gi|82775557|ref|YP_401904.1| PII uridylyl-transferase [Shigella dysenteriae Sd197]
gi|309787161|ref|ZP_07681773.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1617]
gi|91206756|sp|Q32JU2.1|GLND_SHIDS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|81239705|gb|ABB60415.1| protein PII [Shigella dysenteriae Sd197]
gi|308924739|gb|EFP70234.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1617]
Length = 890
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T L+L D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLDLIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|58040302|ref|YP_192266.1| PII uridylyl-transferase [Gluconobacter oxydans 621H]
gi|81170616|sp|Q5FPT6.1|GLND_GLUOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|58002716|gb|AAW61610.1| [Protein-PII] uridylyltransferase [Gluconobacter oxydans 621H]
Length = 949
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVL--NDLDLIIRRAYISSDGEWFMDV 79
+P V R T + V A+ G ++ L + ++ R + SDG +D
Sbjct: 741 SPVTVEAYPIPERGVTELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDG-MALDT 799
Query: 80 FHVTDQNGNKLSEDD----VSERIQQSLGPR---------------ARSFRSL----RRS 116
F V D G E ++ ++Q+L R +R R++ R
Sbjct: 800 FWVQDGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDASHHSTSRRMRAIHVPPRVV 859
Query: 117 VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEAT 176
+ A+ HT IE+ GRDRPGLL +V + LS + A + T+ R V Y+ +
Sbjct: 860 IDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYV-RDLL 918
Query: 177 GLPIDDPDTLAKIKRLLLYVL 197
G+ I DP LA+++ LL L
Sbjct: 919 GMKITDPVRLARLRETLLASL 939
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 21/197 (10%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S++ L+ +++ A + T + MA + + G ++P L ++ L+
Sbjct: 764 DHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQDGEGCSFEEPHQLGRLNHLV 823
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
L G D R S ST + R + P V +++
Sbjct: 824 EQALSGRLDIRKGIEDASHHSTSRRMRAIHV---------------------PPRVVIDN 862
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+TV+ + DRP LL D L+ + A + A +Y+R + G I
Sbjct: 863 TASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVRDLLGMKI 922
Query: 314 SSEAERQRVINCLEAAI 330
+ R+ L A++
Sbjct: 923 TDPVRLARLRETLLASL 939
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 41/206 (19%)
Query: 228 DRDYDMNYAESGSASGRSKPLVTVES--CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQY 285
D D M +A S R + VTVE+ ++G T + + C D P L L
Sbjct: 722 DTDTQMRHARMVHDSDRYRSPVTVEAYPIPERGVTELTVLCADHPGLFSQIAGALAVSGA 781
Query: 286 VVYHATVIAESPE-AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTS--EGIS--- 339
+ A + S A ++++ +G + R+ + +E A+ R +GI
Sbjct: 782 SIVDARIHTLSDGMALDTFWVQDGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDAS 841
Query: 340 -----------------------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
+E+ DR GLL DVT L ++ A +
Sbjct: 842 HHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHI 901
Query: 371 TTRGSQAVNVFYVVDASG----NPVK 392
TT G +AV+VFYV D G +PV+
Sbjct: 902 TTYGMRAVDVFYVRDLLGMKITDPVR 927
>gi|407781039|ref|ZP_11128259.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
gi|407208465|gb|EKE78383.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
Length = 973
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 86 NGNKLSEDDVSERIQQSLGPRARSFRSLRRS-VGVQAALEHTTIELTGRDRPGLLSEVFA 144
+G + + E+ +L R R F+ R + +A+ HT IEL GRDRPGLLS++
Sbjct: 836 SGELKTRQALREKAAGALPSRTRVFKVPPRVLIDNKASATHTVIELNGRDRPGLLSDIAR 895
Query: 145 VLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
L+ L V A++ T+ V Y+ + GL ++ LA I+ LL L
Sbjct: 896 ALNQLSLQVSSAKISTYGETAIDVFYV-KDVFGLKVEHASKLAAIREKLLTAL 947
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+++ ++ G L ++ + LN L L + A IS+ GE +DVF+V
Sbjct: 863 PPRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYV 922
Query: 83 TDQNGNKLSEDDVSERIQQ----------SLGPRARSFRSLRRSVGVQAA 122
D G K+ I++ S+ A++ R+S VQAA
Sbjct: 923 KDVFGLKVEHASKLAAIREKLLTALAEPGSVSASAQAGEKRRKSATVQAA 972
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL DR GLLSD+ R + L V+ A+++T G A++VFYV D G V+ + +
Sbjct: 879 IELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKDVFGLKVEHASKLAA 938
Query: 400 RKEIGLTIL 408
+E LT L
Sbjct: 939 IREKLLTAL 947
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 86/224 (38%), Gaps = 35/224 (15%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S + ++ +++ A ++T MA + +AT P D P
Sbjct: 764 TEVTICTPDHPGLFSRLAGAMAVAGASIVDARIFTMTDGMALDTFWVQDATDGPFDQPTK 823
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
LA++ + + G+ R A + + R+ ++
Sbjct: 824 LARLSAAIHKAMSGELKTRQALREKAAGALPSRTRVFKV--------------------- 862
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P V +++ +TV+ L DRP LL D L + V A + A +Y+
Sbjct: 863 PPRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYV 922
Query: 306 RHVDGNPISSEAE----RQRVINCL----------EAAIKRRTS 335
+ V G + ++ R++++ L +A KRR S
Sbjct: 923 KDVFGLKVEHASKLAAIREKLLTALAEPGSVSASAQAGEKRRKS 966
>gi|366159388|ref|ZP_09459250.1| PII uridylyl-transferase [Escherichia sp. TW09308]
Length = 890
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVI----------NCLEAAIKRRTSEGIS------------- 339
+ + DG+P+S++ R VI + + RR +
Sbjct: 752 FIVLEPDGSPLSTD--RHEVIRFGLEQILTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|392380967|ref|YP_005030163.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
gi|356875931|emb|CCC96679.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
Length = 935
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+V+ ++ G L +L + L +L L I A IS+ GE +DVF+V
Sbjct: 846 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 905
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++ + +I++ L
Sbjct: 906 KDVFGLKVTHESKLAQIRERL 926
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 61 DLIIRRAYISSDGEWFMDVFHVTD-------QNGNKLSEDDVSERIQQSLGPRARSFRSL 113
D++ R + ++G +DVF V D ++G+KL++ +S I++ L + + L
Sbjct: 773 DIVDARIFTMTNG-MALDVFTVQDAAGGGAFESGDKLAK--LSVMIEKVLSGQLKPLHDL 829
Query: 114 ------------------RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R + A+ HT IE+ GRDRPGLL ++ L++L +
Sbjct: 830 TKRKAPHASRTRVFHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISS 889
Query: 156 AEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
A++ T+ + V Y+ + GL + LA+I+ LL+ L
Sbjct: 890 AKISTYGEKAIDVFYV-KDVFGLKVTHESKLAQIRERLLHAL 930
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 34/238 (14%)
Query: 101 QSLGPRARSFR-SLR--RSVGVQAALEH----TTIELTGRDRPGLLSEVFAVLSDLKCNV 153
++LG +AR R +LR R + V ++ T + + D GL S + L+ ++
Sbjct: 715 ETLGRQARLVREALRDERPLTVNTRIDRGRAITEVTIFATDHHGLFSRLAGALAAAGADI 774
Query: 154 MGAEVWTHNSRMASVVYITSEATGL-PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
+ A ++T + MA V+ +A G + D LAK+ ++ VL G T
Sbjct: 775 VDARIFTMTNGMALDVFTVQDAAGGGAFESGDKLAKLSVMIEKVLSGQLKPLHDLTKRKA 834
Query: 213 DSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKL 272
+ R H P V +++ +TV+ + DRP L
Sbjct: 835 PHASRTRVFH----------------------VPPRVLIDNNASTTHTVIEVNGRDRPGL 872
Query: 273 LFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAE----RQRVINCL 326
L+D LT++ + A + +A +Y++ V G ++ E++ R+R+++ L
Sbjct: 873 LYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFGLKVTHESKLAQIRERLLHAL 930
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLL D+TR L ++ A+++T G +A++VFYV D G V E+
Sbjct: 862 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFGLKVTHES 917
>gi|456358634|dbj|BAM93079.1| Uridylyl-removing enzyme [Agromonas oligotrophica S58]
Length = 931
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I+ P
Sbjct: 849 YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPT 907
Query: 185 TLAKIKRLLLYVLKGD 200
A IK LL++L D
Sbjct: 908 RQAAIKSALLHLLASD 923
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQAA 911
Query: 400 RKEIGLTILRVKDDA 414
K L +L D A
Sbjct: 912 IKSALLHLLASDDSA 926
>gi|398846487|ref|ZP_10603457.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
gi|398252519|gb|EJN37706.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
Length = 900
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R+ T++++ + ++ G L L ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQ------------ 120
+ V D +G + D +R++Q + R+ ++R V Q
Sbjct: 749 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTI 806
Query: 121 ---AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
A + T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 807 LNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DADN 865
Query: 178 LPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
P+ DP ++++ ++ L+ + S+ T ++
Sbjct: 866 QPLSDPQLCSRLQEAIVQQLQAGQASESSPTRMT 899
>gi|384214647|ref|YP_005605811.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
gi|354953544|dbj|BAL06223.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
Length = 929
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I+ P
Sbjct: 848 YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPT 906
Query: 185 TLAKIKRLLLYVLKGDR 201
+ IK L +V+ GD+
Sbjct: 907 RQSAIKSALTHVMAGDK 923
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 896 DLLGAQINAPTRQSAIKSAL 915
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++ A V T G +A +VFYV D G + + T +S
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 400 RKEIGLTILRVKDDA 414
K LT + D A
Sbjct: 911 IKS-ALTHVMAGDKA 924
>gi|336310906|ref|ZP_08565875.1| [Protein-PII] uridylyltransferase [Shewanella sp. HN-41]
gi|335865586|gb|EGM70602.1| [Protein-PII] uridylyltransferase [Shewanella sp. HN-41]
Length = 860
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 33/200 (16%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+ +PLV V T +G T + + C DRPK LF V + D + + H I S + Y
Sbjct: 659 QDEPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALD 717
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS------------- 339
+ I DG P+S + Q + LE A+ R+ S +
Sbjct: 718 TFVILEQDGEPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQVSFLES 777
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+EL D GLL+ V IF ++ A++TT G +A + F + G +
Sbjct: 778 SRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTNDGLQL- 836
Query: 393 SETIESVRKEIGLTILRVKD 412
+ET E+ +E ++ LR +
Sbjct: 837 NETQENTLREALISALRASN 856
>gi|429086328|ref|ZP_19149060.1| [Protein-PII] uridylyltransferase [Cronobacter universalis NCTC
9529]
gi|426506131|emb|CCK14172.1| [Protein-PII] uridylyltransferase [Cronobacter universalis NCTC
9529]
Length = 882
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 685 SQPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 743
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 744 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 802
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 803 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 862
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 863 LLQQEVRQRL 872
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 684 LSQPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 743
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 744 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 803
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 804 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 860
>gi|427431046|ref|ZP_18920742.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
gi|425878223|gb|EKV26942.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
Length = 926
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 23/146 (15%)
Query: 77 MDVFHVTDQNGNKLSEDDVSERIQQ---------------------SLGPRARSFR-SLR 114
+DVF V D +G ++++D +R+ + L R R F+ R
Sbjct: 768 LDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRTRVFKVPPR 827
Query: 115 RSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
V A+ +T IE+ GRDRPG L +V A L+ + A+V T R+ V Y+ +
Sbjct: 828 VVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYV-KD 886
Query: 175 ATGLPIDDPDTLAKIKRLLLYVLKGD 200
G+ I+ L +++ L+ L G+
Sbjct: 887 VFGMKIEHEGKLKQVRETLMDTLNGE 912
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDNT+++ T+I+V+ ++ G L ++ L L I A +++ GE +DVF+V
Sbjct: 825 PPRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYV 884
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ + ++++++L
Sbjct: 885 KDVFGMKIEHEGKLKQVRETL 905
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S++ +S ++ A++ T + MA V+ + G + D D
Sbjct: 727 TDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTGMALDVFSVQDNDGTAVTDEDK 786
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSAS--- 242
L ++ R++ L G ++ +++ + SG S
Sbjct: 787 LDRLARIIENALSGK------------------------IWLEKE--LAAKPSGLPSRTR 820
Query: 243 -GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V V++ K YTV+ + DRP L+D LT ++ A V
Sbjct: 821 VFKVPPRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVD 880
Query: 302 EYYIRHVDGNPISSEAE----RQRVINCLEAAIKR 332
+Y++ V G I E + R+ +++ L + R
Sbjct: 881 VFYVKDVFGMKIEHEGKLKQVRETLMDTLNGEVAR 915
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 40/200 (20%)
Query: 241 ASGRSKPLVTVESCTD--KGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESP 297
A+GR L+TV+ CTD +G T V + D P L ++ + A ++ +
Sbjct: 709 AAGR---LLTVDVCTDEIRGVTDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTG 765
Query: 298 EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRT---------SEGIS--------- 339
A + ++ DG ++ E + R+ +E A+ + G+
Sbjct: 766 MALDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRTRVFKVP 825
Query: 340 ---------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVV 384
+E+ DR G L DVT GL + A+VTT G + V+VFYV
Sbjct: 826 PRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVK 885
Query: 385 DASGNPVKSE-TIESVRKEI 403
D G ++ E ++ VR+ +
Sbjct: 886 DVFGMKIEHEGKLKQVRETL 905
>gi|300993612|ref|ZP_07180468.1| protein-P-II uridylyltransferase [Escherichia coli MS 45-1]
gi|422362645|ref|ZP_16443206.1| protein-P-II uridylyltransferase [Escherichia coli MS 153-1]
gi|432454944|ref|ZP_19697156.1| [protein-PII] uridylyltransferase [Escherichia coli KTE201]
gi|433056492|ref|ZP_20243593.1| [protein-PII] uridylyltransferase [Escherichia coli KTE124]
gi|300406535|gb|EFJ90073.1| protein-P-II uridylyltransferase [Escherichia coli MS 45-1]
gi|315294610|gb|EFU53957.1| protein-P-II uridylyltransferase [Escherichia coli MS 153-1]
gi|430986877|gb|ELD03443.1| [protein-PII] uridylyltransferase [Escherichia coli KTE201]
gi|431575432|gb|ELI48167.1| [protein-PII] uridylyltransferase [Escherichia coli KTE124]
Length = 890
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
KPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 GKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|260596587|ref|YP_003209158.1| PII uridylyl-transferase [Cronobacter turicensis z3032]
gi|260215764|emb|CBA28173.1| [Protein-PII] uridylyltransferase [Cronobacter turicensis z3032]
Length = 891
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SQPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVSFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 871
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 872 LLQQEVRQRL 881
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSQPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRARSFRSLRRSVGVQAAL--EHT 126
F V + +G+ LS D +++R Q PR + + +V + + HT
Sbjct: 753 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVSFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 869
>gi|417229422|ref|ZP_12031008.1| protein-P-II uridylyltransferase [Escherichia coli 5.0959]
gi|386205912|gb|EII10418.1| protein-P-II uridylyltransferase [Escherichia coli 5.0959]
Length = 890
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATTDRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|410663631|ref|YP_006916002.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025988|gb|AFU98272.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
Length = 897
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 235 YAESGSASGRSKPLVTVES---CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHAT 291
+ E+ + G +PL+ + +G T + +R D+ + A L+ +Q + A
Sbjct: 683 HTEAIACHGSDEPLILIRQSRIAGMEGATQIFVRTKDQNNVFAAAANALSGLQLDIQDAR 742
Query: 292 VIAESPEAY--QEYYIRHVDGNPISSE---------AERQRVINCLEAAIKRRTSEGIS- 339
+ + SP+ Y +++ +G P S + + ++N I RRT +
Sbjct: 743 IYS-SPDGYTIDTFFVLDENGEPTSPDRFDLIRRALLDELALVNSYPEIISRRTPRMLKH 801
Query: 340 -------------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNV 380
LE+ DR GLL+ + R+F ++G+ + A++ T G + ++
Sbjct: 802 FSMPSRTRLSNDLIAGTSVLEVISPDRPGLLAAIGRVFLQHGIQLQNAKIATLGERVEDI 861
Query: 381 FYVVDASGNPV 391
F++ D GNP+
Sbjct: 862 FFITDHDGNPL 872
>gi|429104046|ref|ZP_19166020.1| [Protein-PII] uridylyltransferase [Cronobacter turicensis 564]
gi|426290695|emb|CCJ92133.1| [Protein-PII] uridylyltransferase [Cronobacter turicensis 564]
Length = 891
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SQPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 753 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 871
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 872 LLQQEVRQRL 881
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 693 LSQPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 752
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 753 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 812
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 813 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 869
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0.1|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 101 QSLGPRARSFR-SLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVW 159
++ G R R F + ++ Q + HT IE++G DRPGLL ++ +S L N+ A V
Sbjct: 822 RAAGKRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVA 881
Query: 160 THNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTA 209
T R V Y+T + G I P A IKR L+++L S NTA
Sbjct: 882 TFGERARDVFYVT-DLLGARITAPTRQAAIKRALVHLLA------SGNTA 924
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 20 RMNP----PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
R+ P P+VT++N + + T+I+V ++ G L +L ++ L+L I A++++ GE
Sbjct: 827 RLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 886
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSL 103
DVF+VTD G +++ I+++L
Sbjct: 887 ARDVFYVTDLLGARITAPTRQAAIKRAL 914
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 46/247 (18%)
Query: 94 DVSERIQQSLGPRA--RSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKC 151
D+ +I+ + RA +S R L +VG A T + + D P LLS + +
Sbjct: 704 DLEHKIRHARFLRASEQSGRKLNINVGFDEARGVTELTILAADHPWLLSIIAGACASAGA 763
Query: 152 NVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
N++ A+++T T++ L DT+A + Y D +R+A A
Sbjct: 764 NIVDAQIYT-----------TTDGQAL-----DTIAISRE---YERDEDEGRRAARIAEI 804
Query: 212 VDSTHKER-RLHQMMYADRDYDMNYAESGSASGRSKPL-----VTVESCTDKGYTVVNLR 265
++ + R RL +M S +A R +P VT+ + +T++ +
Sbjct: 805 IEQVLEGRLRLPDVM-----------PSRAAGKRLRPFVVEPKVTINNQWSDRHTMIEVS 853
Query: 266 CPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINC 325
DRP LLF ++ + + A V A +Y+ + G I++
Sbjct: 854 GLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTR------- 906
Query: 326 LEAAIKR 332
+AAIKR
Sbjct: 907 -QAAIKR 912
>gi|422297483|ref|ZP_16385118.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
gi|407991091|gb|EKG33029.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
Length = 788
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 35/191 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 578 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 637
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + + L A IKRR +
Sbjct: 638 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 697
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 698 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 757
Query: 392 KSETIESVRKE 402
+ S +E
Sbjct: 758 SDPQLCSQLQE 768
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 691 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 750
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + ++Q+++
Sbjct: 751 DANNQPLSDPQLCSQLQEAI 770
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 578 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 637
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + + ERIQ + R+ ++R V Q L+H
Sbjct: 638 YIVLDHEGGSIGNN--PERIQDIRDGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 693
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 694 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 752
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 753 NNQPLSDPQLCSQLQ 767
>gi|260913600|ref|ZP_05920076.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
gi|260632139|gb|EEX50314.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
Length = 872
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEA 299
A + LV + + G T V + C D+P L V T+ ++ ++ A +I +
Sbjct: 676 AENETDLLVKISNRFSDGGTEVFVYCKDQPNLFNKVVTTIGAKKFSIHDAQIITSHDGYV 735
Query: 300 YQEYYIRHVDGNPISSEAER---QRVINCLEAA------------------------IKR 332
+ + + +DGN + + R + + L++ +K
Sbjct: 736 FDTFMVTELDGNLVKFDRRRSLEKFLTQALQSTKLPKLTPLINRKLQHFSVKTEVRFLKE 795
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
++ +ELC D+ GLL+ V+++F E L++ A++TT G +A + F + +++ + +
Sbjct: 796 NRTDQTEMELCALDQTGLLAKVSQVFSELKLNLLNAKITTVGEKAEDFFILTNSNDHALS 855
Query: 393 SETIESVRKEI 403
E E + K +
Sbjct: 856 LEQREHLEKRL 866
>gi|387770803|ref|ZP_10126978.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
gi|386903553|gb|EIJ68363.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
Length = 858
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 34/181 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
S+ +V V + G T + + C D+P L + C +++ + ++ A ++ A+ +
Sbjct: 667 SQIVVKVSNRFSSGGTGIFIYCKDQPSLFYKVACVISNKKLSIHDAQIMTSLDGYAFDTF 726
Query: 304 YIRHVDGNPISSEAERQ---RVINCLEA---------------------------AIKRR 333
+ +DG+ ++ + R+ ++ L++ IK
Sbjct: 727 IVTEIDGSLLNFDRRRKLEKSIVEVLKSNDLPKLQGINNHRLQHFYVTTEVRFLNTIKNT 786
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
+E +EL D+ GLL+DV+RIF E+ L++ A++TT G + + F + +A +
Sbjct: 787 HTE---MELYALDKTGLLADVSRIFSEHNLNIQNAKITTVGEKVEDFFILTNAENKALTE 843
Query: 394 E 394
+
Sbjct: 844 Q 844
>gi|90421866|ref|YP_530236.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB18]
gi|90103880|gb|ABD85917.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris BisB18]
Length = 931
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
++ Q + +T IE++G DRPGLL ++ +S L N+ A V T R V Y+T +
Sbjct: 840 AINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVT-DL 898
Query: 176 TGLPIDDPDTLAKIKRLLLYVL-KGDRDKRSAN 207
G I P A IKR L+++L GD +++ A+
Sbjct: 899 LGAQITAPTRQAAIKRALIHLLANGDVEQKQAS 931
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + + T+I+V ++ G L +L ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 897 DLLGAQITAPTRQAAIKRAL 916
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E AI + SE + +E+ DR GLL +T + L++ A V T G +A +VFYV D
Sbjct: 838 EVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 386 ASGNPVKSETIESVRKEIGLTIL 408
G + + T ++ K + +L
Sbjct: 898 LLGAQITAPTRQAAIKRALIHLL 920
>gi|158421962|ref|YP_001523254.1| PII uridylyl-transferase [Azorhizobium caulinodans ORS 571]
gi|158328851|dbj|BAF86336.1| protein-P-II uridylyltransferase [Azorhizobium caulinodans ORS 571]
Length = 984
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VTV+NT + + T+++V ++ G L EL L+ L+L I A++++ GE +DVF+VT
Sbjct: 885 PEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVT 944
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++ I+++L
Sbjct: 945 DLMGAKITGAARQSTIRRAL 964
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 105 PRARSFRSLRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
P+AR S+ V V HT +E++G DRPGLL E+ LS L N+ A V T
Sbjct: 875 PKARRTFSVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFG 934
Query: 163 SRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDK 203
R V Y+T + G I + I+R L+ V +G D+
Sbjct: 935 ERAVDVFYVT-DLMGAKITGAARQSTIRRALIGVFEGSFDE 974
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIES 398
+E+ DR GLL ++T L++ A V T G +AV+VFYV D G + +S
Sbjct: 900 VEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVTDLMGAKITGAARQS 958
>gi|389693889|ref|ZP_10181983.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
gi|388587275|gb|EIM27568.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
Length = 916
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V +DN+ + + T+I++ ++ G L +L L L+L I A+I + GE +DVF+V
Sbjct: 819 PPEVNIDNSLSSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYV 878
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G K++ I ++L
Sbjct: 879 TDLTGTKITHAGRQATITRTL 899
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T IE++G DRPGLL ++ L L N+ A + T + V Y+T + TG I
Sbjct: 832 QTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVT-DLTGTKITHAG 890
Query: 185 TLAKIKRLLLYVLKGD 200
A I R LL V K +
Sbjct: 891 RQATITRTLLEVFKAE 906
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+E+ DR GLL D+T + L++ A + T G +AV+VFYV D +G +
Sbjct: 835 IEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTDLTGTKI 886
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 98 RIQQSLGPRARSFRSLRRSVGVQAAL--------EHTTIELTGRDRPGLLSEVFAVLSDL 149
R+ +++ RA + R+ R+ V+ + +T IE++G DRPGLL ++ +S L
Sbjct: 815 RLPEAVARRATNGRAKLRAFVVEPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKL 874
Query: 150 KCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL-KGDRDKRSA 206
N+ A V T R V Y+T + G I P A IKR L+++L GD +++ A
Sbjct: 875 NLNIASAHVATFGERARDVFYVT-DLLGAQITAPTRQAAIKRALVHLLANGDAEQQPA 931
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V+++N + + T+I+V ++ G L +L ++ L+L I A++++ GE DVF+VT
Sbjct: 838 PEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 897
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 898 DLLGAQITAPTRQAAIKRAL 917
>gi|70728556|ref|YP_258305.1| PII uridylyl-transferase [Pseudomonas protegens Pf-5]
gi|81170625|sp|Q4KHH8.1|GLND_PSEF5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68342855|gb|AAY90461.1| protein-P-II uridylyltransferase [Pseudomonas protegens Pf-5]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A +I S + +
Sbjct: 689 PLVLIKEITQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP E R+ + + L I+RR +
Sbjct: 749 YIVLDNDGESIGNNPQRVEQIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 802 PEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DAHNQPLSDPQLCSRLQDAI 881
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 27/192 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + + R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKEITQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDNDGESIGNNPQRVEQIRKGLTDALRNPDDYPTIIQRRV-PRQLKHFAFAPEVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQ 866
Query: 179 PIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 867 PLSDPQLCSRLQ 878
>gi|381152286|ref|ZP_09864155.1| (protein-PII) uridylyltransferase [Methylomicrobium album BG8]
gi|380884258|gb|EIC30135.1| (protein-PII) uridylyltransferase [Methylomicrobium album BG8]
Length = 876
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK-SETIES 398
+EL DRAGLLS + R F + +++ A++TT GS+A ++FYV D++ P+ +ET +
Sbjct: 806 IELITTDRAGLLSKIGRAFLKQHINLHNAKITTIGSRAEDMFYVTDSALRPITDAETQKK 865
Query: 399 VRKEI 403
+R+EI
Sbjct: 866 LREEI 870
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 20/144 (13%)
Query: 75 WFMDVFHVTDQNG-----------------NKLSEDDVSERIQQSLGPRARSFRSLRRSV 117
+ ++ F V +QNG N L V ER R + S+
Sbjct: 734 YVLNSFQVLEQNGEPITDLLREVHICSVLRNNLLNKAVHERKNIHRQSRQAKHFPIPTSI 793
Query: 118 GVQA-ALEH-TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
Q L H T IEL DR GLLS++ N+ A++ T SR + Y+T A
Sbjct: 794 RFQDDPLSHCTIIELITTDRAGLLSKIGRAFLKQHINLHNAKITTIGSRAEDMFYVTDSA 853
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKG 199
PI D +T K++ ++ L G
Sbjct: 854 LR-PITDAETQKKLREEIVSALGG 876
>gi|304396642|ref|ZP_07378523.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
gi|304356151|gb|EFM20517.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
Length = 884
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 42/226 (18%)
Query: 218 ERRLHQMMYADR-DYDMNYAESGSA--------SGRSKPLVTVESCTDKGYTVVNLRCPD 268
E RLHQ+ R DY + + + A KPLV V +G T + + PD
Sbjct: 651 EERLHQIWNRCRADYFLRHTPNQIAWHARHLLVHDLKKPLVLVSPQATRGGTEIFIWSPD 710
Query: 269 RPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQEYYIRHVDGNPISSEAERQRVINCL 326
RP LF AV D + + H I S + A + + DG+P+S + +I L
Sbjct: 711 RPH-LFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLSPD-RHPMIIQAL 768
Query: 327 EAAI---------KRRTSEGIS--------------------LELCCEDRAGLLSDVTRI 357
E AI RR S + LEL D+ GLL+ V +
Sbjct: 769 EQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEV 828
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEI 403
F + G+S+ A ++T G + ++F + ++ + E +++++ +
Sbjct: 829 FADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRKALQQRL 874
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 3 CWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
W + +V + +K P V V + R T I + S ++ + L+ +L
Sbjct: 675 AWHARHLLVHDLKK-------PLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNL 727
Query: 63 IIRRAYI--SSDGEWFMDVFHVTDQNGNKLSED-------DVSERIQQS--LGPRARSFR 111
+ A I S DG MD F V + +G+ LS D + + I QS + PR R
Sbjct: 728 SVHDAQIFTSRDGM-AMDTFIVLEPDGSPLSPDRHPMIIQALEQAITQSDWVPPRTRRPS 786
Query: 112 SLRRSVGVQAALE----HTT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS 163
+ R V + HT +EL D+PGLL+ V V +DL ++ GA + T
Sbjct: 787 AKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGE 846
Query: 164 RMASVVYITS 173
R+ + + +
Sbjct: 847 RVEDLFILAN 856
>gi|149200755|ref|ZP_01877730.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
gi|149145088|gb|EDM33114.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
Length = 921
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 24/198 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + NV+ A +T A+ V+ +A G P + D L +++ ++
Sbjct: 740 DHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDADGHPFE-ADRLPRLRNMI 798
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
LKG+ R A S D K R + R +T ++
Sbjct: 799 QKTLKGEVVPREAIK--SRDKLKKRER---------------------AFRVPTHITFDN 835
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ YT++ + DRP LL+D TL + A + + +Y++ + G
Sbjct: 836 DGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFGLKF 895
Query: 314 SSEAERQRVINCLEAAIK 331
S+++R + L AAI+
Sbjct: 896 HSDSKRAALERKLRAAIE 913
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +T DN + T+I+VD+ ++ G L +L + L ++ I A I++ GE +D F+V
Sbjct: 828 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K D +++ L
Sbjct: 888 KDMFGLKFHSDSKRAALERKL 908
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLL D+TR N + + A + T G Q V+ FYV D G S++
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFGLKFHSDS 899
>gi|67633328|gb|AAY78579.1| uridylyltransferase [uncultured bacterium MedeBAC82F10]
Length = 851
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 46/69 (66%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PR+T+DN ++ AT ++ S +++G L++++Q+ +D ++ ++ A IS+ GE D+F +T
Sbjct: 767 PRITIDNQMSKLATTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 84 DQNGNKLSE 92
D K+ +
Sbjct: 827 DLKNKKVKD 835
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 30/179 (16%)
Query: 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIRHVDGNPISSEA 317
Y V + CP+R +L D V Q + + +I+ + + +++ I +
Sbjct: 673 YGAVIVICPNRSGVLKDIVAGFHSSQINILGSRIISLNNNDIIDVFWVTSSIQKAIIEKN 732
Query: 318 ERQRVINCLEAAIKRRTSE---------------------------GISLELCCEDRAGL 350
E++RVI + A++ + E + ++ DR GL
Sbjct: 733 EQERVIQNITASLNQEELETYQTLFQTKIKVEVEPRITIDNQMSKLATTFQILSGDRQGL 792
Query: 351 LSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK-SETIESVRKEIGLTIL 408
L D+ +IF + +SV A+++T G + ++F + D VK ++T++++ ++ L IL
Sbjct: 793 LMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKVKDTKTLKTLEDQL-LKIL 850
>gi|359409332|ref|ZP_09201800.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676085|gb|EHI48438.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 963
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV V N + T+I+V+ A++ G L ++ L L L I A +S+ GE +DVF+V
Sbjct: 865 PPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYV 924
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ + ++I+Q+L
Sbjct: 925 KDVYGLKIEREASQKKIEQTL 945
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 33 NRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS--DGEWFMDVFHVTDQNGNKL 90
++++T++ V +A+ G +V + I A I++ DG +D F + D++ +
Sbjct: 763 DKESTILVVMAADHPGLFSRIVGAVAVAGCSIMNARINTRHDGT-ILDQFRIQDKDRQAV 821
Query: 91 SEDDVSERI----QQSLGPRARSFRSLR-RSVGV---QAALE--------------HTTI 128
+ + RI +QSL FR L+ RS + Q A+ HT I
Sbjct: 822 IDPQIQNRIAKIIEQSLAGDISLFRRLQERSAQITKRQKAMSVPPRVIVSNNRSNTHTVI 881
Query: 129 ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188
E+ G DRPGLL ++ L L + A V T+ ++ V Y+ + GL I+ + K
Sbjct: 882 EVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYV-KDVYGLKIEREASQKK 940
Query: 189 IKRLLLYVL 197
I++ L+ V
Sbjct: 941 IEQTLMGVF 949
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
R++ +E+ DR GLL +T + GL + A V+T G + V+VFYV D G ++
Sbjct: 874 RSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVKDVYGLKIE 933
Query: 393 SETIESVRKEIGLTILRVKD 412
E+ +K+I T++ V D
Sbjct: 934 R---EASQKKIEQTLMGVFD 950
>gi|325278101|ref|ZP_08143616.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
gi|324096767|gb|EGB95098.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 35/191 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAA----------IKRRTSEGIS------------ 339
Y + DG I +R R I + L A I+RR +
Sbjct: 749 YIVLDNDGGSIGDNPQRVRQIRDGLSEALRNPENYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 392 KSETIESVRKE 402
+ S +E
Sbjct: 869 SDPQLCSRLQE 879
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L L ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 100/217 (46%), Gaps = 33/217 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + + R+ ++R V Q L+H
Sbjct: 749 YIVLDNDGGSIG--DNPQRVRQIRDGLSEALRNPENYPTIIQRRVPRQ--LKHFDFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 805 TILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
P+ DP ++++ ++ L+ + ++ + +++
Sbjct: 864 DNQPLSDPQLCSRLQEAIVQQLQAGQGSDTSPSRLTI 900
>gi|424066534|ref|ZP_17803998.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440720411|ref|ZP_20900829.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440726539|ref|ZP_20906792.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443645006|ref|ZP_21128856.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
gi|408002133|gb|EKG42396.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440365936|gb|ELQ03023.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440366121|gb|ELQ03206.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443285023|gb|ELS44028.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
Length = 898
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCRQLQDAI 880
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 866
Query: 180 IDDP 183
+ DP
Sbjct: 867 LSDP 870
>gi|406707469|ref|YP_006757821.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
gi|406653245|gb|AFS48644.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
Length = 851
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 50/80 (62%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PR+T+DN ++ T ++ S +++G L++++Q+ +D ++ ++ A IS+ GE D+F +T
Sbjct: 767 PRITIDNQMSKLVTTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D K+ + + + ++ L
Sbjct: 827 DLKNKKIKDTKILKTLEDQL 846
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 253 SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIRHVDGN 311
+ +K Y V + CP+R +L D V Q + + +I+ + + +++
Sbjct: 667 NYNNKEYGAVIVICPNRSGVLKDIVAGFNSSQINILGSRIISLNNNDIIDVFWVTSSIQK 726
Query: 312 PISSEAERQRVINCLEAAIKRRTSEG---------------------------ISLELCC 344
I + E++RVI + +++ + E + ++
Sbjct: 727 AIVEKNEQERVIQNITSSLNQEELETYQPLFQTKIKVEVEPRITIDNQMSKLVTTFQILS 786
Query: 345 EDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIG 404
DR GLL D+ +IF + +SV A+++T G + ++F + D +K I ++
Sbjct: 787 GDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKIKDTKILKTLEDQL 846
Query: 405 LTIL 408
L IL
Sbjct: 847 LKIL 850
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 18/185 (9%)
Query: 30 NTSNRKATLIKVDSANKRGSLLELVQVLNDLDL-IIRRAYISSDGEWFMDVFHVTDQNGN 88
N +N++ + V N+ G L ++V N + I+ IS + +DVF VT
Sbjct: 667 NYNNKEYGAVIVICPNRSGVLKDIVAGFNSSQINILGSRIISLNNNDIIDVFWVTSSIQK 726
Query: 89 KLSEDDVSERIQQSL-----GPRARSFRSL-----------RRSVGVQAALEHTTIELTG 132
+ E + ER+ Q++ +++ L R ++ Q + TT ++
Sbjct: 727 AIVEKNEQERVIQNITSSLNQEELETYQPLFQTKIKVEVEPRITIDNQMSKLVTTFQILS 786
Query: 133 RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRL 192
DR GLL ++ + D +V A++ T+ ++ + IT + I D L ++
Sbjct: 787 GDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT-DLKNKKIKDTKILKTLEDQ 845
Query: 193 LLYVL 197
LL +L
Sbjct: 846 LLKIL 850
>gi|404398828|ref|ZP_10990412.1| PII uridylyl-transferase [Pseudomonas fuscovaginae UPB0736]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I +R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPKRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF+V DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTDAQNQPL 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF VT
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D LS+ + R+Q ++
Sbjct: 862 DAQNQPLSDPQLCSRLQDAI 881
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V V++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPKRVKQIRDGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V ++T +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVT-DAQNQ 866
Query: 179 PIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 867 PLSDPQLCSRLQ 878
>gi|86158117|ref|YP_464902.1| metal dependent phosphohydrolase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774628|gb|ABC81465.1| metal dependent phosphohydrolase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 930
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 48/224 (21%)
Query: 114 RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
RR +GV T + LT RDRPGLL+ V VL+ + ++ AEV++ + A+ ++
Sbjct: 730 RRDLGV------TELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAG 783
Query: 174 EATGL-----PIDDPDTLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMM 225
A + P D P A+ +R L VL G+ + T RRL
Sbjct: 784 RALDVFELRGPDDGPVEPARWRAARRDLARVLAGEEPLDALMT----------RRLRAST 833
Query: 226 YADRDYDMNYAESGSASGRSKPL------VTVESCTDKGYTVVNLRCPDRPKLLFDAVCT 279
A +KPL + +++ + + ++VV++ DR LL T
Sbjct: 834 VA-----------------AKPLPRVPTKIVIDNHSARAHSVVDVFTADRVGLLHTVART 876
Query: 280 LTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVI 323
++ V A + E A +Y+R DG P+ A+ +RV+
Sbjct: 877 FFELGVSVDLARIATEGHRAADAFYVRTADGRPLEG-AQAERVV 919
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 70/187 (37%), Gaps = 43/187 (22%)
Query: 256 DKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE----------AYQEYYI 305
D G T + L DRP LL L + + HA V + SP+ A + +
Sbjct: 732 DLGVTELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFEL 791
Query: 306 RHVDGNPISSEAERQ------RVI---NCLEAAIKRRTSEGIS----------------- 339
R D P+ R RV+ L+A + RR
Sbjct: 792 RGPDDGPVEPARWRAARRDLARVLAGEEPLDALMTRRLRASTVAAKPLPRVPTKIVIDNH 851
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+++ DR GLL V R F E G+SV A + T G +A + FYV A G P++
Sbjct: 852 SARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATEGHRAADAFYVRTADGRPLE 911
Query: 393 SETIESV 399
E V
Sbjct: 912 GAQAERV 918
>gi|1169939|sp|P41393.1|GLND_KLEOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|470140|emb|CAA55353.1| PII-uridylyltransferase [Klebsiella pneumoniae]
Length = 887
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AV D + + H I + + A
Sbjct: 690 SKPMILLSSHATRGGTEIFIWSPDRP-YLFAAVSAELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R ++I LE + +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRTQMIRVGLEQTLSQRSWQPPAPRRQAAKLRHFSVPTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALN 866
Query: 393 SETIESVRKEI 403
+E + V++ +
Sbjct: 867 NELQQEVQQRL 877
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LSKPMILLSSHATRGGTEIFIWSPDRPYLFAAVSAELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +S+R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRTQMIRVGLEQTLSQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 859
>gi|407972980|ref|ZP_11153893.1| PII uridylyl-transferase [Nitratireductor indicus C115]
gi|407431751|gb|EKF44422.1| PII uridylyl-transferase [Nitratireductor indicus C115]
Length = 932
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 95 VSERIQQSLGPR--ARSFR-SLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKC 151
+ E I++ PR R+FR R +G + + +E+ G DRPGLLSE+ LSDL
Sbjct: 811 LPEIIEKRARPRRSTRAFRVEPRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSL 870
Query: 152 NVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
++ A + T ++ Y+T + TG I PD L I R LL L+
Sbjct: 871 DIASAHITTFGEKVIDTFYVT-DLTGQKIVSPDRLDAICRALLETLE 916
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV + N + + +++++ ++ G L EL + L+DL L I A+I++ GE +D F+VT
Sbjct: 832 PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K+ D + I ++L
Sbjct: 892 DLTGQKIVSPDRLDAICRAL 911
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
+E+ DR GLLS++T + L + A +TT G + ++ FYV D +G + S
Sbjct: 847 VEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVS 900
>gi|422616472|ref|ZP_16685178.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330896056|gb|EGH28277.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 728
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 518 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 577
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 578 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 637
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 638 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 697
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 631 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 690
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 691 DANNHPLSDPQLCRQLQDAI 710
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 518 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 577
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 578 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 637
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 638 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 696
Query: 180 IDDP 183
+ DP
Sbjct: 697 LSDP 700
>gi|308185738|ref|YP_003929869.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
gi|308056248|gb|ADO08420.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
Length = 884
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 42/226 (18%)
Query: 218 ERRLHQMMYADR-DYDMNYAESGSA--------SGRSKPLVTVESCTDKGYTVVNLRCPD 268
E RLHQ+ R DY + + + A KPLV V +G T + + PD
Sbjct: 651 EERLHQIWNRCRADYFLRHTPNQIAWHARHLLVHDLKKPLVLVSPQATRGGTEIFIWSPD 710
Query: 269 RPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQEYYIRHVDGNPISSEAERQRVINCL 326
RP LF AV D + + H I S + A + + DG+P+S + +I L
Sbjct: 711 RPH-LFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLSPD-RHPMIIQAL 768
Query: 327 EAAI---------KRRTSEGIS--------------------LELCCEDRAGLLSDVTRI 357
E AI RR S + LEL D+ GLL+ V +
Sbjct: 769 EQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEV 828
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEI 403
F + G+S+ A ++T G + ++F + ++ + E +++++ +
Sbjct: 829 FADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRKALQQRL 874
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 3 CWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
W + +V + +K P V V + R T I + S ++ + L+ +L
Sbjct: 675 AWHARHLLVHDLKK-------PLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNL 727
Query: 63 IIRRAYI--SSDGEWFMDVFHVTDQNGNKLSED-------DVSERIQQS--LGPRARSFR 111
+ A I S DG MD F V + +G+ LS D + + I QS + PR R
Sbjct: 728 SVHDAQIFTSRDGM-AMDTFIVLEPDGSPLSPDRHPMIIQALEQAITQSDWVPPRTRRPS 786
Query: 112 SLRRSVGVQAALE----HTT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS 163
+ R V + HT +EL D+PGLL+ V V +DL ++ GA + T
Sbjct: 787 AKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGE 846
Query: 164 RMASVVYITS 173
R+ + + +
Sbjct: 847 RVEDLFILAN 856
>gi|424071187|ref|ZP_17808613.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999261|gb|EKG39647.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 898
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCRQLQDAI 880
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 866
Query: 180 IDDP 183
+ DP
Sbjct: 867 LSDP 870
>gi|26988321|ref|NP_743746.1| PII uridylyl-transferase [Pseudomonas putida KT2440]
gi|386013537|ref|YP_005931814.1| protein GlnD [Pseudomonas putida BIRD-1]
gi|38257489|sp|Q88MI2.1|GLND_PSEPK RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24983069|gb|AAN67210.1|AE016348_2 protein-pII uridylyltransferase [Pseudomonas putida KT2440]
gi|313500243|gb|ADR61609.1| GlnD [Pseudomonas putida BIRD-1]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L L ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + R+ ++R V Q L+H
Sbjct: 749 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQ--LKHFDFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 805 TILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
P+ DP ++++ ++ L+ + ++ T V+
Sbjct: 864 DNQPLSDPQLCSRLQEAIVQQLQAGQGSDTSQTRVT 899
>gi|354721569|ref|ZP_09035784.1| PII uridylyl-transferase [Enterobacter mori LMG 25706]
Length = 891
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 33/173 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SKPMILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+SS+ + + LE AI +R+ +
Sbjct: 753 FIVLEPDGSPLSSD-RHEGIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVNFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATA 864
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 693 LSKPMILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 751
Query: 79 VFHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEH 125
F V + +G+ LS D +++R Q PR + R V H
Sbjct: 752 TFIVLEPDGSPLSSDRHEGIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVNFLPTH 811
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I +
Sbjct: 812 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIAT 863
>gi|341613492|ref|ZP_08700361.1| PII uridylyl-transferase [Citromicrobium sp. JLT1363]
Length = 918
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL--DLIIRRAYISSDGEWFMDVFHVT 83
V + R ATL+ V +A+ G + + ++ + ++I R + + G + +D F V
Sbjct: 715 VHCEPDEERGATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTG-YAVDNFLVQ 773
Query: 84 DQNGNKLSEDDVSERIQQSLG----------PRARSFRSLRRSVGV-----------QAA 122
D G + ED+ ERI++S+ P+ RR G A+
Sbjct: 774 DPLGQRFGEDNQLERIERSIADALERGAQLVPKLAQRPLPRRGAGAFDVRPSVAFDNDAS 833
Query: 123 LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
T IE++ RDRP LL+ + L + + A + + R A Y+T + TG I D
Sbjct: 834 HRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT-DLTGDKITD 892
Query: 183 PDTLAKIKRLLL 194
P L I+ L+
Sbjct: 893 PSRLETIRAALV 904
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V DN ++ + T+I+V + ++ L L + L + +IR A+I+ GE D F+VT
Sbjct: 824 PSVAFDNDASHRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT 883
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+++ E I+ +L
Sbjct: 884 DLTGDKITDPSRLETIRAAL 903
>gi|197122569|ref|YP_002134520.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter sp. K]
gi|196172418|gb|ACG73391.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter sp. K]
Length = 930
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 114 RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
RR +G+ T + LT RDRPGLL+ V VL+ + ++ AEV++ + A+ ++
Sbjct: 730 RRDLGL------TELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAG 783
Query: 174 EATGL-----PIDDPDTLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMM 225
A + P D P A+ +R L+ VL G+ + T RRL
Sbjct: 784 RALDVFELRGPDDGPVEPARWRAARRDLVRVLAGEEPLDALMT----------RRLR--- 830
Query: 226 YADRDYDMNYAESGSASGRSKPL------VTVESCTDKGYTVVNLRCPDRPKLLFDAVCT 279
++S +KPL + +++ + + ++VV++ DR LL T
Sbjct: 831 --------------ASSVAAKPLPRVPTKIVIDNHSARAHSVVDVFTADRVGLLHTVART 876
Query: 280 LTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSE 316
++ V A + E A +Y+R DG P+ E
Sbjct: 877 FFELGVSVDLARIATEGHRAADAFYVRAADGRPLEGE 913
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 43/182 (23%)
Query: 256 DKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE----------AYQEYYI 305
D G T + L DRP LL L + + HA V + SP+ A + +
Sbjct: 732 DLGLTELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFEL 791
Query: 306 RHVDGNPISS---EAERQRVINCL------EAAIKRR----------------------- 333
R D P+ A R+ ++ L +A + RR
Sbjct: 792 RGPDDGPVEPARWRAARRDLVRVLAGEEPLDALMTRRLRASSVAAKPLPRVPTKIVIDNH 851
Query: 334 TSEGISL-ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
++ S+ ++ DR GLL V R F E G+SV A + T G +A + FYV A G P++
Sbjct: 852 SARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATEGHRAADAFYVRAADGRPLE 911
Query: 393 SE 394
E
Sbjct: 912 GE 913
>gi|7387711|sp|Q53245.2|GLND_RHITR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 948
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 825 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 884
Query: 83 TDQNGNKLSEDD 94
D G K+S ++
Sbjct: 885 ADLVGQKISNEN 896
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + +E
Sbjct: 841 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKISNE 895
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ DRPGLLSE+ AVLSDL ++ A + T ++ Y+ ++ G I + +
Sbjct: 839 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV-ADLVGQKISNENR 897
Query: 186 LAKIKRLLLYVLKGDRDK 203
A I L V+ G+ D+
Sbjct: 898 RAYITARLKAVMAGEEDE 915
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V + + +TV+ + C DRP LL + L+D+ + A + + +Y+
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 307 HVDGNPISSEAERQRVINCLEAAI 330
+ G IS+E R + L+A +
Sbjct: 886 DLVGQKISNENRRAYITARLKAVM 909
>gi|167032157|ref|YP_001667388.1| PII uridylyl-transferase [Pseudomonas putida GB-1]
gi|189041208|sp|B0KS97.1|GLND_PSEPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166858645|gb|ABY97052.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida GB-1]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L L ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + R+ ++R V Q L+H
Sbjct: 749 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQ--LKHFDFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 805 TILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
P+ DP ++++ ++ L+ + ++ T V+
Sbjct: 864 DNQPLSDPQLCSRLQEAIVQQLQAGQGSDTSPTRVT 899
>gi|24373194|ref|NP_717237.1| protein-P-II uridylyltransferase GlnD [Shewanella oneidensis MR-1]
gi|30173051|sp|Q8EGH8.1|GLND_SHEON RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24347412|gb|AAN54681.1| protein-P-II uridylyltransferase GlnD [Shewanella oneidensis MR-1]
Length = 861
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 33/194 (17%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEY 303
+PLV V T +G T + + C DRPK LF V + D + + H I S + Y +
Sbjct: 661 EPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALDTF 719
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS--------------- 339
I DG P+S + Q + LE A+ R+ S +
Sbjct: 720 VILEQDGEPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQVSFLESNR 779
Query: 340 -----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+EL D GLL+ V IF ++ A++TT G +A + F+++ + +E
Sbjct: 780 HGTSMMELIALDTPGLLAKVGDIFYRCNTTLLSAKITTIGERAED-FFILQTNDGLQLNE 838
Query: 395 TIESVRKEIGLTIL 408
T E KE ++ L
Sbjct: 839 TQEHTLKEALISAL 852
>gi|393721067|ref|ZP_10340994.1| PII uridylyl-transferase [Sphingomonas echinoides ATCC 14820]
Length = 926
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLN--DLDLIIRRAYISSDGEWFMDVFHVT 83
+T R ATL+ V +A+ G + ++ ++I R + + DG +D F V
Sbjct: 725 ITAQVYPERGATLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDG-MALDNFLVQ 783
Query: 84 DQNGNKLSEDDVSERIQQSLG--------------------PRARSFRSLRRSVGV--QA 121
D G E R++Q++ PRA +F ++ +V + +A
Sbjct: 784 DPFGRPFDESAQLSRLKQAIEDALANRGKMIDRLMAKPLTRPRAEAF-AIAPNVLIDNKA 842
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
+ T IE+ RDRP LL ++ L K + A V T+ R Y+T + TG I
Sbjct: 843 SNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT-DLTGDKIA 901
Query: 182 DPDTLAKIKRLLLYVLKGDR 201
P L I+R LL G+R
Sbjct: 902 APSRLKTIERRLLGAAAGER 921
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +DN ++ + T+I++++ ++ L +L L + I A++++ GE +D F++T
Sbjct: 834 PNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K++ + I++ L
Sbjct: 894 DLTGDKIAAPSRLKTIERRL 913
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 23/190 (12%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL + +S N++ A + T MA ++ + G P D+
Sbjct: 736 TLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDGMALDNFLVQDPFGRPFDESAQ 795
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L+++K+ + L AN +D R + + + R AE+ + +
Sbjct: 796 LSRLKQAIEDAL--------ANRGKMID-----RLMAKPLTRPR------AEAFAIA--- 833
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P V +++ +TV+ + DRP LL L + ++ A V A +Y+
Sbjct: 834 -PNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYL 892
Query: 306 RHVDGNPISS 315
+ G+ I++
Sbjct: 893 TDLTGDKIAA 902
>gi|381405610|ref|ZP_09930294.1| PII uridylyl-transferase [Pantoea sp. Sc1]
gi|380738809|gb|EIB99872.1| PII uridylyl-transferase [Pantoea sp. Sc1]
Length = 884
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 42/226 (18%)
Query: 218 ERRLHQMMYADR-DYDMNYAESGSA--------SGRSKPLVTVESCTDKGYTVVNLRCPD 268
E RLHQ+ R DY + + + A KPLV V +G T + + PD
Sbjct: 651 EERLHQIWNRCRADYFLRHTPNQIAWHARHLLVHDLKKPLVLVSPQATRGGTEIFIWSPD 710
Query: 269 RPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQEYYIRHVDGNPISSEAERQRVINCL 326
RP LF AV D + + H I S + A + + DG+P+S + +I L
Sbjct: 711 RPH-LFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLSPD-RHPMIIQAL 768
Query: 327 EAAI---------KRRTSEGIS--------------------LELCCEDRAGLLSDVTRI 357
E AI RR S + LEL D+ GLL+ V +
Sbjct: 769 EQAITQSQWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEV 828
Query: 358 FRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEI 403
F + G+S+ A ++T G + ++F + ++ + E +++++ +
Sbjct: 829 FADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRKALQQRL 874
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 3 CWSSSFAVVDEFEKLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
W + +V + +K P V V + R T I + S ++ + L+ +L
Sbjct: 675 AWHARHLLVHDLKK-------PLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNL 727
Query: 63 IIRRAYI--SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQ---------QSLGPRARSFR 111
+ A I S DG MD F V + +G+ LS D IQ Q + PR R
Sbjct: 728 SVHDAQIFTSRDGM-AMDTFIVLEPDGSPLSPDRHPMIIQALEQAITQSQWVPPRTRRPS 786
Query: 112 SLRRSVGVQAALE----HTT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS 163
+ R V + HT +EL D+PGLL+ V V +DL ++ GA + T
Sbjct: 787 AKLRHFSVDTEVNFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGE 846
Query: 164 RMASVVYITS 173
R+ + + +
Sbjct: 847 RVEDLFILAN 856
>gi|104783197|ref|YP_609695.1| PII uridylyl-transferase [Pseudomonas entomophila L48]
gi|122402173|sp|Q1I624.1|GLND_PSEE4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|95112184|emb|CAK16911.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl removing enzyme) (UTase)
[Pseudomonas entomophila L48]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 35/193 (18%)
Query: 245 SKPLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AY 300
S PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 687 SGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTL 746
Query: 301 QEYYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS---------- 339
Y + DG I +R + I A I+RR +
Sbjct: 747 DTYIVLDNDGGSIGDNPQRVKQIRDGLTEALRTPEDYPAIIQRRVPRQLKHFDFPPQVTI 806
Query: 340 ----------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
LE+ DR GLL+ + RIF E +S+ A++ T G + +VF++ DA
Sbjct: 807 LNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITDADNQ 866
Query: 390 PVKSETIESVRKE 402
P+ + S +E
Sbjct: 867 PLSDPQLCSRLQE 879
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + ++ + D+ ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 33/204 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V + L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + R+ ++R V Q L+H
Sbjct: 749 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRTPEDYPAIIQRRVPRQ--LKHFDFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 805 TILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKG 199
P+ DP ++++ ++ L+
Sbjct: 864 DNQPLSDPQLCSRLQEAIIQQLQA 887
>gi|440225345|ref|YP_007332436.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
gi|440036856|gb|AGB69890.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
Length = 971
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSEDD 94
D G K+S ++
Sbjct: 908 ADLVGQKISNEN 919
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ DRPGLLSE+ AVLSDL ++ A + T ++ Y+ ++ G I + +
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV-ADLVGQKISNENR 920
Query: 186 LAKIKRLLLYVLKGDRDK 203
A I L V+ G+ D+
Sbjct: 921 RAYITARLKAVMAGEEDE 938
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + +E
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKISNE 918
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V + + +TV+ + C DRP LL + L+D+ + A + + +Y+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 307 HVDGNPISSEAERQRVINCLEAAI 330
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVM 932
>gi|148549394|ref|YP_001269496.1| PII uridylyl-transferase [Pseudomonas putida F1]
gi|397695319|ref|YP_006533200.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|421522651|ref|ZP_15969292.1| PII uridylyl-transferase [Pseudomonas putida LS46]
gi|166990446|sp|A5W852.1|GLND_PSEP1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148513452|gb|ABQ80312.1| metal dependent phosphohydrolase [Pseudomonas putida F1]
gi|397332049|gb|AFO48408.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|402753751|gb|EJX14244.1| PII uridylyl-transferase [Pseudomonas putida LS46]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L L ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + R+ ++R V Q L+H
Sbjct: 749 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQ--LKHFDFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 805 TILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
P+ DP ++++ ++ L+ + ++ T V+
Sbjct: 864 DNQPLSDPQLCSRLQEAIVQQLQAGQGSDTSQTRVT 899
>gi|383649266|ref|ZP_09959672.1| PII uridylyl-transferase [Streptomyces chartreusis NRRL 12338]
Length = 815
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV+V ++R AT+I+V S + G L + + L D +++R A++S+ G +D F+V
Sbjct: 730 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYV 789
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T G L D+ V+ +++++L
Sbjct: 790 TGPEGAPLPGDEAESVARKLEETL 813
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + + V A V+T G+ AV+ FYV G P+ + ESV
Sbjct: 746 IEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYVTGPEGAPLPGDEAESV 805
Query: 400 RKEIGLTI 407
+++ T+
Sbjct: 806 ARKLEETL 813
>gi|1184993|gb|AAC32290.1| putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
tropici CIAT 899]
Length = 971
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 83 TDQNGNKLSEDD 94
D G K+S ++
Sbjct: 908 ADLVGQKISNEN 919
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ DRPGLLSE+ AVLSDL ++ A + T ++ Y+ ++ G I + +
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV-ADLVGQKISNENR 920
Query: 186 LAKIKRLLLYVLKGDRDK 203
A I L V+ G+ D+
Sbjct: 921 RAYITARLKAVMAGEEDE 938
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + +E
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKISNE 918
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V + + +TV+ + C DRP LL + L+D+ + A + + +Y+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 307 HVDGNPISSEAERQRVINCLEAAI 330
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVM 932
>gi|395445036|ref|YP_006385289.1| PII uridylyl-transferase [Pseudomonas putida ND6]
gi|388559033|gb|AFK68174.1| PII uridylyl-transferase [Pseudomonas putida ND6]
Length = 897
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L L ++ + DL ++ A I++ GE DVF +
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 858 TDADNQPLSDPQLCSRLQEAI 878
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I +R + I EA I+RR +
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 865
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + R+ ++R V Q L+H
Sbjct: 746 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQ--LKHFDFPPQV 801
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 802 TILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 860
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
P+ DP ++++ ++ L+ + ++ T V+
Sbjct: 861 DNQPLSDPQLCSRLQEAIVQQLQAGQGSDTSQTRVT 896
>gi|431801156|ref|YP_007228059.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
gi|430791921|gb|AGA72116.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L L ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + R+ ++R V Q L+H
Sbjct: 749 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQ--LKHFDFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 805 TILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
P+ DP ++++ ++ L+ + ++ T V+
Sbjct: 864 DNQPLSDPQLCSRLQEAIVQQLQAGQASDASPTRVT 899
>gi|339486111|ref|YP_004700639.1| PII uridylyl-transferase [Pseudomonas putida S16]
gi|338836954|gb|AEJ11759.1| PII uridylyl-transferase [Pseudomonas putida S16]
Length = 897
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L L ++ + DL ++ A I++ GE DVF +
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 858 TDADNQPLSDPQLCSRLQEAI 878
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I +R + I EA I+RR +
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 865
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + R+ ++R V Q L+H
Sbjct: 746 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQ--LKHFDFPPQV 801
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 802 TILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 860
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
P+ DP ++++ ++ L+ + ++ T V+
Sbjct: 861 DNQPLSDPQLCSRLQEAIVQQLQAGQASDASPTRVT 896
>gi|414175718|ref|ZP_11430122.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
gi|410889547|gb|EKS37350.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
Length = 947
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
S+ Q + +T IE++G DRPGLL ++ +S L N+ A V T R V Y+T +
Sbjct: 856 SINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT-DL 914
Query: 176 TGLPIDDPDTLAKIKRLLLYVL-KGDRDKRSA 206
G I P A IKR L+++L GD ++ A
Sbjct: 915 LGAQITAPTRQAAIKRALIHLLANGDAAEKPA 946
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 20 RMNP----PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
R+ P P V+++N + + T+I+V ++ G L +L ++ L+L I A++++ GE
Sbjct: 845 RLKPFSVEPEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 904
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSL 103
DVF+VTD G +++ I+++L
Sbjct: 905 ARDVFYVTDLLGAQITAPTRQAAIKRAL 932
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL +T + L++ A V T G +A +VFYV D G + + T ++
Sbjct: 868 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 927
Query: 400 RKEIGLTILRVKDDA 414
K + +L D A
Sbjct: 928 IKRALIHLLANGDAA 942
>gi|422638289|ref|ZP_16701720.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
gi|330950684|gb|EGH50944.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
Length = 898
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCRQLQDAI 880
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 866
Query: 180 IDDP 183
+ DP
Sbjct: 867 LSDP 870
>gi|302187896|ref|ZP_07264569.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae 642]
Length = 898
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCRQLQDAI 880
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 866
Query: 180 IDDP 183
+ DP
Sbjct: 867 LSDP 870
>gi|66044589|ref|YP_234430.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae B728a]
gi|75503002|sp|Q4ZWT0.1|GLND_PSEU2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|63255296|gb|AAY36392.1| Protein-P-II uridylyltransferase [Pseudomonas syringae pv. syringae
B728a]
Length = 898
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCRQLQDAI 880
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 866
Query: 180 IDDP 183
+ DP
Sbjct: 867 LSDP 870
>gi|313109063|ref|ZP_07795035.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|386067693|ref|YP_005982997.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982618|ref|YP_006481205.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
gi|419754750|ref|ZP_14281108.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|310881537|gb|EFQ40131.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|348036252|dbj|BAK91612.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398568|gb|EIE44973.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318123|gb|AFM63503.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ + I + +A++ V ++ L+L I+ A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + + +E+ DRPGLL+ + + D +V A++ T R+ V YIT +A P
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT-DARNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+ DPD +++ L+ L D + + T ++
Sbjct: 868 LADPDLCKRLQAALVEQLSQDNGRDTLPTRIN 899
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + + + + + D+ V + + + A +I + +
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG+ I + ER + +I+ L+ I+RR +
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + IF + LSV A++ T G + +VFY+ DA P+
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPL 868
>gi|114048202|ref|YP_738752.1| PII uridylyl-transferase [Shewanella sp. MR-7]
gi|113889644|gb|ABI43695.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. MR-7]
Length = 861
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEY 303
+PLV V T +G T + + C DRPK LF V + D + + H I S + Y +
Sbjct: 661 EPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALDTF 719
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS--------------- 339
I DG P+S + Q + LE A+ R+ S +
Sbjct: 720 VILEQDGAPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQVSFLESNR 779
Query: 340 -----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+EL D GLL+ V IF ++ A++TT G +A + F+++ + +E
Sbjct: 780 HGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAED-FFILQTNDGLQLNE 838
Query: 395 TIESVRKEIGLTIL 408
T E+ KE ++ L
Sbjct: 839 TQENTLKEALISAL 852
>gi|289675253|ref|ZP_06496143.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 299
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 89 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 148
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 149 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 208
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 209 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 268
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 202 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 261
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 262 DANNHPLSDPQLCRQLQDAI 281
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 89 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 148
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 149 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 208
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 209 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 267
Query: 180 IDDP 183
+ DP
Sbjct: 268 LSDP 271
>gi|422671223|ref|ZP_16730589.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330968963|gb|EGH69029.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 898
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCRQLQDAI 880
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 866
Query: 180 IDDP 183
+ DP
Sbjct: 867 LSDP 870
>gi|152988175|ref|YP_001346865.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA7]
gi|166990444|sp|A6V1D0.1|GLND_PSEA7 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150963333|gb|ABR85358.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa PA7]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ + I + +A++ V ++ L+L I+ A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + + +E+ DRPGLL+ + + D +V A++ T R+ V YIT +A P
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT-DARNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+ DPD +++ L+ L D + + T ++
Sbjct: 868 LADPDLCKRLQAALVEQLSQDNGRDTLPTRIN 899
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + + + + + D+ V + + + A +I + +
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG+ I + ER + +I+ L+ I+RR +
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + IF + LSV A++ T G + +VFY+ DA P+
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPL 868
>gi|107103172|ref|ZP_01367090.1| hypothetical protein PaerPA_01004241 [Pseudomonas aeruginosa PACS2]
gi|218890117|ref|YP_002438981.1| PII uridylyl-transferase [Pseudomonas aeruginosa LESB58]
gi|416854831|ref|ZP_11911161.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|420138143|ref|ZP_14646084.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|421158549|ref|ZP_15617797.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|421179178|ref|ZP_15636774.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|424939528|ref|ZP_18355291.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|226723946|sp|B7V7F5.1|GLND_PSEA8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218770340|emb|CAW26105.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa LESB58]
gi|334843580|gb|EGM22167.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|346055974|dbj|GAA15857.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403249126|gb|EJY62641.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|404547421|gb|EKA56419.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|404549490|gb|EKA58348.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|453047335|gb|EME95049.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA21_ST175]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ + I + +A++ V ++ L+L I+ A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + + +E+ DRPGLL+ + + D +V A++ T R+ V YIT +A P
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT-DARNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+ DPD +++ L+ L D + + T ++
Sbjct: 868 LADPDLCKRLQAALVEQLSQDNGRDTLPTRIN 899
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + + + + + D+ V + + + A +I + +
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG+ I + ER + +I+ L+ I+RR +
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + IF + LSV A++ T G + +VFY+ DA P+
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPL 868
>gi|414164976|ref|ZP_11421223.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
gi|410882756|gb|EKS30596.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
Length = 943
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+TG DRPGLL ++ +S L N+ A V T R+ V Y+T + G I P
Sbjct: 862 YTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT-DLMGAQITAPT 920
Query: 185 TLAKIKRLLLYVLKGDRDKRSA 206
A IKR L+++L R A
Sbjct: 921 RQAAIKRALVHLLANPDVARGA 942
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + T+I+V ++ G L +L ++ L L I A++++ GE DVF+VT
Sbjct: 850 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 909
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 910 DLMGAQITAPTRQAAIKRAL 929
>gi|422664985|ref|ZP_16724858.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330975404|gb|EGH75470.1| PII uridylyl-transferase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 380
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 170 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 229
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 230 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 289
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 290 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 349
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 283 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 342
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 343 DANNHPLSDPQLCRQLQDAI 362
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 170 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 229
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 230 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 289
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 290 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 348
Query: 180 IDDP 183
+ DP
Sbjct: 349 LSDP 352
>gi|296387835|ref|ZP_06877310.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAb1]
gi|416873843|ref|ZP_11917746.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
gi|334844257|gb|EGM22834.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ + I + +A++ V ++ L+L I+ A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + + +E+ DRPGLL+ + + D +V A++ T R+ V YIT +A P
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT-DARNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+ DPD +++ L+ L D + + T ++
Sbjct: 868 LADPDLCKRLQAALVEQLSQDNGRDTLPTRIN 899
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + + + + + D+ V + + + A +I + +
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG+ I + ER + +I+ L+ I+RR +
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + IF + LSV A++ T G + +VFY+ DA P+
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPL 868
>gi|113970978|ref|YP_734771.1| PII uridylyl-transferase [Shewanella sp. MR-4]
gi|113885662|gb|ABI39714.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. MR-4]
Length = 861
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEY 303
+PLV V T +G T + + C DRPK LF V + D + + H I S + Y +
Sbjct: 661 EPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALDTF 719
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS--------------- 339
I DG P+S + Q + LE A+ R+ S +
Sbjct: 720 VILEQDGAPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQVSFLESNR 779
Query: 340 -----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+EL D GLL+ V IF ++ A++TT G +A + F+++ + +E
Sbjct: 780 HGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAED-FFILQTNDGLQLNE 838
Query: 395 TIESVRKEIGLTIL 408
T E+ KE ++ L
Sbjct: 839 TQENTLKEALISAL 852
>gi|422628315|ref|ZP_16693524.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330936832|gb|EGH40981.1| PII uridylyl-transferase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 623
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 413 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 472
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 473 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 532
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 533 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 592
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 526 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 585
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q +
Sbjct: 586 DANNHPLSDPQLCRQLQDEI 605
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 413 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 472
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 473 YIVLDHEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 532
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 533 DAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 591
Query: 180 IDDP 183
+ DP
Sbjct: 592 LSDP 595
>gi|218528430|ref|YP_002419246.1| PII uridylyl-transferase [Methylobacterium extorquens CM4]
gi|218520733|gb|ACK81318.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens
CM4]
Length = 928
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V++DN + + T++++ ++ G L EL LN L L I A++++ GE +DVF+V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 83 TDQNGNKLSEDD 94
TD G ++ + D
Sbjct: 880 TDLTGTRVVQPD 891
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+TG DRPGLL E+ L+ L N+ A V T R V Y+T + TG + PD
Sbjct: 834 TVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT-DLTGTRVVQPDR 892
Query: 186 LAKIKRLLLYVLKGD 200
LA I+ ++ V D
Sbjct: 893 LAMIRAAVMEVFACD 907
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLL ++T L++T A V T G +AV+VFYV D +G P +
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVVQPDRLAM 895
Query: 396 IESVRKEI---GLTILRVKD-DAYSKSPP 420
I + E+ + LR + DA SPP
Sbjct: 896 IRAAVMEVFACDVAALRAEGLDALVDSPP 924
>gi|170723245|ref|YP_001750933.1| PII uridylyl-transferase [Pseudomonas putida W619]
gi|229487482|sp|B1JBR2.1|GLND_PSEPW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169761248|gb|ACA74564.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida W619]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V ++ + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + RIF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q+++
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + D +R++Q + R+ ++R V Q L+H
Sbjct: 749 YIVLDNDGGSIG--DNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQ--LKHFNFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+T DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 805 TILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
P+ DP ++++ ++ L+ + ++ T V+
Sbjct: 864 DNQPLSDPQLCSRLQEAIVQQLQAGQASDASPTRVT 899
>gi|119386663|ref|YP_917718.1| PII uridylyl-transferase [Paracoccus denitrificans PD1222]
gi|119377258|gb|ABL72022.1| metal dependent phosphohydrolase [Paracoccus denitrificans PD1222]
Length = 936
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 24/198 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + N++ A +T A+ V+ +A G P D L +++ ++
Sbjct: 746 DHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYA-ADRLPRLRTMI 804
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
LKG+ R A A RD + A+ R VT ++
Sbjct: 805 QRTLKGEIVAREA-------------------LAGRDK----PKKREAAFRFPTHVTFDN 841
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
YTV+ + DRP LL+D TL D + A + + +Y++ + G +
Sbjct: 842 EASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFGLKL 901
Query: 314 SSEAERQRVINCLEAAIK 331
R+ + L AIK
Sbjct: 902 HQPQRREALEKRLRQAIK 919
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P VT DN ++ T+I+VD+ ++ G L +L + L D + I A I++ G +D F+V
Sbjct: 834 PTHVTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 893
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G KL + E +++ L
Sbjct: 894 KDMFGLKLHQPQRREALEKRL 914
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLL D+TR +N + + A + T G+Q V+ FYV D G P + E
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFGLKLHQPQRREA 909
Query: 396 IE 397
+E
Sbjct: 910 LE 911
>gi|15598854|ref|NP_252348.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO1]
gi|254236571|ref|ZP_04929894.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|254242355|ref|ZP_04935677.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|355639998|ref|ZP_09051488.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|386057355|ref|YP_005973877.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|418586107|ref|ZP_13150153.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589465|ref|ZP_13153387.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421152533|ref|ZP_15612113.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|421166110|ref|ZP_15624378.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|421518201|ref|ZP_15964875.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|451987762|ref|ZP_21935914.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
gi|12230934|sp|Q9Z9H0.2|GLND_PSEAE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|9949819|gb|AAG07046.1|AE004785_10 protein-PII uridylyltransferase [Pseudomonas aeruginosa PAO1]
gi|126168502|gb|EAZ54013.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|126195733|gb|EAZ59796.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|347303661|gb|AEO73775.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|354831518|gb|EHF15530.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|375043781|gb|EHS36397.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051699|gb|EHS44165.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|404347683|gb|EJZ74032.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|404525293|gb|EKA35569.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404539087|gb|EKA48592.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|451754521|emb|CCQ88437.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ + I + +A++ V ++ L+L I+ A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + + +E+ DRPGLL+ + + D +V A++ T R+ V YIT +A P
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT-DARNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+ DPD +++ L+ L D + + T ++
Sbjct: 868 LADPDLCKRLQAALVEQLSQDNGRDTLPTRIN 899
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + + + + + D+ V + + + A +I + +
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG+ I + ER + +I+ L+ I+RR +
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + IF + LSV A++ T G + +VFY+ DA P+
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPL 868
>gi|224110178|ref|XP_002315438.1| predicted protein [Populus trichocarpa]
gi|222864478|gb|EEF01609.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 26/163 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+ AT++++ ++ G+L++ + L L L + + + +DG F +T
Sbjct: 11 PVVLIDQDSDSDATIVQLSFGDRLGALIDTMNALKHLGLDVAKGTVLTDGPVKQTKFFIT 70
Query: 84 D-QNGNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
G K+ + D+ ERI+ ++ P + ++ + G++A + +++T
Sbjct: 71 RLDTGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 130
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWT 160
DRPGLL E+ +++D+ +V AE+ T
Sbjct: 131 VKEDGPKRSLLCIETADRPGLLVEIIKIIADVNIDVESAEIDT 173
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 25/209 (11%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T ++L+ DR G L + L L +V V T + +IT TG ++DPD
Sbjct: 24 TIVQLSFGDRLGALIDTMNALKHLGLDVAKGTVLTDGPVKQTKFFITRLDTGRKVEDPDM 83
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
L +I+ ++ L + S A+ + E++L D D+ G
Sbjct: 84 LERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKL--------DVDITTHVHVKEDG 135
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ L+ +E+ DRP LL + + + D+ V A + E A ++
Sbjct: 136 PKRSLLCIETA-------------DRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKF 182
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKR 332
++ + SS + Q ++NCL ++R
Sbjct: 183 HVSYRGAALTSSLS--QVLVNCLRYYLRR 209
>gi|163849787|ref|YP_001637830.1| PII uridylyl-transferase [Methylobacterium extorquens PA1]
gi|240136999|ref|YP_002961468.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens AM1]
gi|418060313|ref|ZP_12698231.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
gi|163661392|gb|ABY28759.1| protein-P-II uridylyltransferase [Methylobacterium extorquens PA1]
gi|240006965|gb|ACS38191.1| [Protein-PII] uridylyltransferase (PII uridylyl- transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens AM1]
gi|373566138|gb|EHP92149.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
Length = 928
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V++DN + + T++++ ++ G L EL LN L L I A++++ GE +DVF+V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 83 TDQNGNKLSEDD 94
TD G ++ + D
Sbjct: 880 TDLTGTRVVQPD 891
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+TG DRPGLL E+ L+ L N+ A V T R V Y+T + TG + PD
Sbjct: 834 TVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT-DLTGTRVVQPDR 892
Query: 186 LAKIKRLLLYVLKGD 200
LA I+ ++ V D
Sbjct: 893 LAMIRAAVMEVFASD 907
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLL ++T L++T A V T G +AV+VFYV D +G P +
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVVQPDRLAM 895
Query: 396 IESVRKEI---GLTILRVKD-DAYSKSPP 420
I + E+ + LR + DA SPP
Sbjct: 896 IRAAVMEVFASDVAALRAEGLDALVDSPP 924
>gi|116051655|ref|YP_789506.1| PII uridylyl-transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173104|ref|ZP_15630858.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
gi|122260798|sp|Q02RD0.1|GLND_PSEAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|115586876|gb|ABJ12891.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536405|gb|EKA46045.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
Length = 900
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ + I + +A++ V ++ L+L I+ A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + + +E+ DRPGLL+ + + D +V A++ T R+ V YIT +A P
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT-DARNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+ DPD +++ L+ L D + + T ++
Sbjct: 868 LADPDLCKRLQAALVEQLSQDNGRDTLPTRIN 899
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + + + + + D+ V + + + A +I + +
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG+ I + ER + +I+ L+ I+RR +
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + IF + LSV A++ T G + +VFY+ DA P+
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPL 868
>gi|440744204|ref|ZP_20923508.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
gi|440374218|gb|ELQ10954.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
Length = 898
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I + ER Q + L A IKRR +
Sbjct: 748 YIVLDNEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCRQLQDAI 880
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSED-----DVSERIQQSL-GP-------RARSFRSLRRSVGVQAALEH- 125
+ V D G + + D+ E + ++L P + R R L+ H
Sbjct: 748 YIVLDNEGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 126 ------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHP 866
Query: 180 IDDP 183
+ DP
Sbjct: 867 LSDP 870
>gi|238796605|ref|ZP_04640112.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
gi|238719583|gb|EEQ11392.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
Length = 892
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A A SKPLV V +G T + + PDRP L F AV D + + H I
Sbjct: 685 HARHLLAHDSSKPLVLVSHQATRGGTEIFIWSPDRPSL-FAAVVGELDRRNLSVHDAQIF 743
Query: 295 ESPE--AYQEYYIRHVDGNPISSEAERQRVI-NCLEAAIK---------RRTSEGIS--- 339
+ + A + + DG+P++ + R +I + LE A+ RR S +
Sbjct: 744 TNRDGMAMDTFVVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFS 801
Query: 340 -----------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFY 382
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F
Sbjct: 802 VPTETNFLPTHNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFV 861
Query: 383 VVDASGNPVKSET 395
+ D + ET
Sbjct: 862 LADKDRRALNIET 874
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFVV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRRSVGVQAALEH-------- 125
+ +G+ L++D +S ++Q++ PR R R V
Sbjct: 757 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVL 862
>gi|424047451|ref|ZP_17785010.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
gi|408883944|gb|EKM22707.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
Length = 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
SKPLV + +G T V + PD+P L V L + V+
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I E + +I HV DG P + R + ++ L K
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRL 852
Query: 392 KSETIESVRKEI 403
E + +R+++
Sbjct: 853 SEEQQDELREKL 864
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM + P V + + R T + V S ++ +V L+ + + A I S D
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSE---DDVSERIQQSL-GPRARSFRSLRRSVGVQ-------- 120
G + +D F V DQ+G + E V++ I L R ++ R +Q
Sbjct: 730 G-YVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ + T +E D PGLL++V +DL N+ A++ T R + +TSEA
Sbjct: 789 DFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
>gi|254558851|ref|YP_003065946.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens DM4]
gi|254266129|emb|CAX21881.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens DM4]
Length = 928
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V++DN + + T++++ ++ G L EL LN L L I A++++ GE +DVF+V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 83 TDQNGNKLSEDD 94
TD G ++ + D
Sbjct: 880 TDLTGTRVVQPD 891
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+TG DRPGLL E+ L+ L N+ A V T R V Y+T + TG + PD
Sbjct: 834 TVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT-DLTGTRVVQPDR 892
Query: 186 LAKIKRLLLYVLKGD 200
LA I+ ++ V D
Sbjct: 893 LAMIRAAVMEVFASD 907
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLL ++T L++T A V T G +AV+VFYV D +G P +
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVVQPDRLAM 895
Query: 396 IESVRKEI---GLTILRVKD-DAYSKSPP 420
I + E+ + LR + DA SPP
Sbjct: 896 IRAAVMEVFASDVAALRAEGLDALVDSPP 924
>gi|117921258|ref|YP_870450.1| PII uridylyl-transferase [Shewanella sp. ANA-3]
gi|117613590|gb|ABK49044.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. ANA-3]
Length = 861
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEY 303
+PLV V T +G T + + C DRPK LF V + D + + H I S + Y +
Sbjct: 661 EPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALDTF 719
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS--------------- 339
I DG P+S + Q + LE A+ R+ S +
Sbjct: 720 VILEQDGAPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQVSFLESNR 779
Query: 340 -----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+EL D GLL+ V IF ++ A++TT G +A + F+++ + +E
Sbjct: 780 HGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAED-FFILQTNDGLQLNE 838
Query: 395 TIESVRKEIGLTIL 408
T E+ KE ++ L
Sbjct: 839 TQENTLKEALISAL 852
>gi|209965870|ref|YP_002298785.1| PII uridylyl-transferase [Rhodospirillum centenum SW]
gi|209959336|gb|ACI99972.1| protein-P-II uridylyltransferase [Rhodospirillum centenum SW]
Length = 950
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDNT++ T+++V+ ++ G L + + L L+L I A +++ G +DVF+V
Sbjct: 848 PPRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYV 907
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++ + +I+Q+L
Sbjct: 908 KDVFGLKVTHEAKLTQIRQAL 928
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S + L+ ++ A ++T ++ MA V+ A G + PD LA++ L+
Sbjct: 757 DHPGLFSRLAGALALAGATIVDARIFTMSNGMALDVFSVHAAHGGSFESPDKLARLAVLV 816
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK-----PL 248
L G ++ AD ++ S + R++ P
Sbjct: 817 EKALAG-----------------------ELRMAD---ELAKRRSATLPSRARVFKVPPR 850
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V V++ +TVV + PDRP LL+ LT + + A V A +Y++ V
Sbjct: 851 VLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKDV 910
Query: 309 DGNPISSEAE----RQRVINCL 326
G ++ EA+ RQ +++ L
Sbjct: 911 FGLKVTHEAKLTQIRQALLDAL 932
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 93 DDVSERIQQSLGPRARSFRSLRRS-VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKC 151
D++++R +L RAR F+ R V A+ HT +E+ G DRPGLL V L+ L
Sbjct: 828 DELAKRRSATLPSRARVFKVPPRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNL 887
Query: 152 NVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKG-DRDKRSAN 207
+ A+V T+ + MA V+ + GL + L +I++ LL L D D R+A
Sbjct: 888 QIASAKVATYGN-MAVDVFYVKDVFGLKVTHEAKLTQIRQALLDALADPDTDARTAK 943
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DR GLL VTR L + A+V T G+ AV+VFYV D G V E +
Sbjct: 864 VEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKDVFGLKVTHEAKLTQ 923
Query: 399 VRKEIGLTILRVKDDAYSKSPPQ 421
+R+ + + DA + PP+
Sbjct: 924 IRQALLDALADPDTDARTAKPPR 946
>gi|452878644|ref|ZP_21955838.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
gi|452184717|gb|EME11735.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
Length = 900
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ + I + +A++ V ++ L+L I+ A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + + +E+ DRPGLL+ + + D +V A++ T R+ V YIT +A P
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT-DARNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+ DPD +++ L+ L D + + T ++
Sbjct: 868 LADPDLCKRLQAALVEQLSQDNGRDTLPTRIN 899
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + + + + + D+ V + + + A +I + +
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG+ I + ER + +I+ L+ I+RR +
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + IF + LSV A++ T G + +VFY+ DA P+
Sbjct: 809 DALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPL 868
>gi|430001964|emb|CCF17744.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Rhizobium sp.]
Length = 946
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N + K T+++V+ ++ G L E+ VL DL L I A I++ GE +D F+V
Sbjct: 825 PPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYV 884
Query: 83 TDQNGNKLS----EDDVSERIQQSLGPRARSFRS 112
TD G K++ + ++S R++ + + RS
Sbjct: 885 TDLLGTKITNENRQGNISARLKAVMAEQEDELRS 918
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 29/214 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LLS + S N+ A+++T + R + I E P+D+ +
Sbjct: 728 TEITVLAPDHPRLLSVIAGACSAAGANIADAQIFTTSDGRALDTILINRE---FPVDEDE 784
Query: 185 T--LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSAS 242
A I R++ VL G K+ ++ + K R ++ +D+
Sbjct: 785 LRRAATIGRMIEDVLSG---KKRLPEVIATRAKAKRR--------NKMFDI--------- 824
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
P V + + +TVV + C DRP LL + L D+ ++ A + +
Sbjct: 825 ---PPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDT 881
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G I++E + + L+A + + E
Sbjct: 882 FYVTDLLGTKITNENRQGNISARLKAVMAEQEDE 915
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+++T + + L + A +TT G + ++ FYV D G + +E
Sbjct: 841 VEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVTDLLGTKITNE 895
>gi|354594396|ref|ZP_09012435.1| PII uridylyl-transferase [Commensalibacter intestini A911]
gi|353672072|gb|EHD13772.1| PII uridylyl-transferase [Commensalibacter intestini A911]
Length = 975
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 319 RQRVINCL-EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQ 376
R R I+ I + S G + +E+ DR GLL DVT+ +E L ++ A +TT G +
Sbjct: 854 RMRAIHVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIR 913
Query: 377 AVNVFYVVDASGNPVKSETIESVRKEIGLTIL 408
AV+VFYV D G V+ S+ +E L +L
Sbjct: 914 AVDVFYVKDVFGLKVQDRKRLSIVREAILKVL 945
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S++ L+ +++ A + T + M + +A DDP
Sbjct: 761 TEVTVYAGDHPGLFSKISGALAVAGASIVDARIHTLTNGMVLDTFWIQDAAQDVFDDPHR 820
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L +I L+ L G V ++ +E H M+Y R ++
Sbjct: 821 LERIIELINTALAG---------TVDIEKRLQECNRH-MLYGRRMRAIHVP--------- 861
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P V +++ G+TV+ + DR LL+D T+ + + + A + A +Y+
Sbjct: 862 -PRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYV 920
Query: 306 RHVDGNPISSEAERQRVINCLEAAIK 331
+ V G + +R+R+ EA +K
Sbjct: 921 KDVFGLKVQ---DRKRLSIVREAILK 943
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 94 DVSERIQQS-----LGPRARSFRSLRRSV-GVQAALEHTTIELTGRDRPGLLSEVFAVLS 147
D+ +R+Q+ G R R+ R V QA+ T IE+ GRDR GLL +V +
Sbjct: 837 DIEKRLQECNRHMLYGRRMRAIHVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIK 896
Query: 148 DLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
+ K + A + T+ R V Y+ + GL + D L+ ++ +L VL+
Sbjct: 897 EQKLQISSAHITTYGIRAVDVFYV-KDVFGLKVQDRKRLSIVREAILKVLE 946
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+V+ ++ G L ++ + + + L I A+I++ G +DVF+V
Sbjct: 861 PPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYV 920
Query: 83 TDQNGNKLSE 92
D G K+ +
Sbjct: 921 KDVFGLKVQD 930
>gi|255575072|ref|XP_002528441.1| amino acid binding protein, putative [Ricinus communis]
gi|223532117|gb|EEF33924.1| amino acid binding protein, putative [Ricinus communis]
Length = 420
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 156/383 (40%), Gaps = 66/383 (17%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQN-GNKLSEDDV 95
T++ V+ ++ G +L +++ + L I RA S+DG W VF V + +K++ D +
Sbjct: 22 TVVTVNCPDQAGLGCDLCRIILEFGLSISRADFSTDGRWCYIVFWVVPHSTSHKVNWDSL 81
Query: 96 SERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R+ + P F ++S V + ++ DR GLL +V +L++L+ +
Sbjct: 82 KNRLSCASPPCLGPFYFDQKS-NVTSVPSLYLLKFCFVDRKGLLHDVAKILTELEFTIQR 140
Query: 156 AEVW-THNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDS 214
+V T + ++ + +IT D D L +KR ++T + S
Sbjct: 141 VKVMTTPDGKVVDLFFIT--------DGLDLL-------------HTEKRRSDTCRHLAS 179
Query: 215 THKERRLH-QMMYADRDYDMNYAESGSASGRSKPLVTVES----------CTD------- 256
KE + ++ A +Y+ A S ++ L + E CTD
Sbjct: 180 VFKECCISCELQLAGPEYESLQAFSSLPLPIAEELFSCEQLEEKTCSQALCTDTIADKAT 239
Query: 257 --------KGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ--EYYIR 306
+T++ L+C D+ L +D + T D V + + S + Y+ + +I+
Sbjct: 240 VTVDNNMSPAHTLLQLKCIDQKGLFYDILRTSKDCNIRVAYGR-FSSSLKGYRNMDLFIQ 298
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSEGIS-------------LELCCEDRAGLLSD 353
DG I + + + L+A + R I+ +EL + R + D
Sbjct: 299 QTDGKKIMDPKHQLMLCSRLKAEMLRPFRVIIANRGPDTELLVANPVELSGKGRPRVFYD 358
Query: 354 VTRIFRENGLSVTRAEVTTRGSQ 376
VT + G+ + AE+ +Q
Sbjct: 359 VTLALKTLGICIFSAEIARHSTQ 381
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
C D+AGL D+ RI E GLS++RA+ +T G VF+VV S
Sbjct: 28 CPDQAGLGCDLCRIILEFGLSISRADFSTDGRWCYIVFWVVPHS 71
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF--MDVFHVT 83
VTVDN + TL+++ +++G ++++ D ++ + SS + + MD+F +
Sbjct: 240 VTVDNNMSPAHTLLQLKCIDQKGLFYDILRTSKDCNIRVAYGRFSSSLKGYRNMDLF-IQ 298
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAA----LEHTTIELTGRDRPGLL 139
+G K+ D ++ +A R R + + L +EL+G+ RP +
Sbjct: 299 QTDGKKIM--DPKHQLMLCSRLKAEMLRPFRVIIANRGPDTELLVANPVELSGKGRPRVF 356
Query: 140 SEVFAVLSDLKCNVMGAEVWTHNSR 164
+V L L + AE+ H+++
Sbjct: 357 YDVTLALKTLGICIFSAEIARHSTQ 381
>gi|338972269|ref|ZP_08627644.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234433|gb|EGP09548.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 928
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R V Y+T + G I P
Sbjct: 846 YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPT 904
Query: 185 TLAKIKRLLLYVL-KGDRDKRSA 206
A IKR L+++L GD ++ A
Sbjct: 905 RQAAIKRALIHLLANGDASEKPA 927
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 20 RMNP----PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
R+ P P VT++N + + T+I+V ++ G L +L ++ L+L I A++++ GE
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSL 103
DVF+VTD G +++ I+++L
Sbjct: 886 ARDVFYVTDLLGAQITAPTRQAAIKRAL 913
>gi|422608963|ref|ZP_16680922.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
gi|330894590|gb|EGH27251.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
Length = 898
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G ER Q + N L A IKRR +
Sbjct: 748 YIVLDNEGGSSGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCSQLQDAI 880
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G S D ER+Q+ + R+ ++R V Q L+H
Sbjct: 748 YIVLDNEGG--SSGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 863 NNHPLSDPQLCSQLQ 877
>gi|269960589|ref|ZP_06174961.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
gi|269834666|gb|EEZ88753.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
Length = 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
SKPLV + +G T V + PD+P L V L + V+
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I E + +I HV DG P + R + ++ L K
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRL 852
Query: 392 KSETIESVRKEI 403
E + +R+++
Sbjct: 853 SEEQQDELREKL 864
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM + P V + + R T + V S ++ +V L+ + + A I S D
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSE---DDVSERIQQSL-GPRARSFRSLRRSVGVQ-------- 120
G + +D F V DQ+G + E V++ I L R ++ R +Q
Sbjct: 730 G-YVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ + T +E D PGLL++V +DL N+ A++ T R + +TSEA
Sbjct: 789 DFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
>gi|299132879|ref|ZP_07026074.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
gi|298593016|gb|EFI53216.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
Length = 961
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+TG DRPGLL ++ +S L N+ A V T R+ V Y+T + G I P
Sbjct: 880 YTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT-DLMGAQITAPT 938
Query: 185 TLAKIKRLLLYVL 197
A IKR L+++L
Sbjct: 939 RQAAIKRALVHLL 951
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + T+I+V ++ G L +L ++ L L I A++++ GE DVF+VT
Sbjct: 868 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 927
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 928 DLMGAQITAPTRQAAIKRAL 947
>gi|414169144|ref|ZP_11424981.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
gi|410885903|gb|EKS33716.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
Length = 928
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R V Y+T + G I P
Sbjct: 846 YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPT 904
Query: 185 TLAKIKRLLLYVL-KGDRDKRSA 206
A IKR L+++L GD ++ A
Sbjct: 905 RQAAIKRALIHLLANGDASEKPA 927
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 20 RMNP----PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
R+ P P VT++N + + T+I+V ++ G L +L ++ L+L I A++++ GE
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSL 103
DVF+VTD G +++ I+++L
Sbjct: 886 ARDVFYVTDLLGAQITAPTRQAAIKRAL 913
>gi|365864086|ref|ZP_09403779.1| PII uridylyl-transferase [Streptomyces sp. W007]
gi|364006483|gb|EHM27530.1| PII uridylyl-transferase [Streptomyces sp. W007]
Length = 814
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
++ PPRVTV +R+AT+I+V + + G L + + L + +R A++S+ G +D
Sbjct: 726 VKAPPPRVTVAAAGSRRATVIEVRAQDAPGLLHRIGRALEGSAVRVRSAHVSTLGANAVD 785
Query: 79 VFHVTDQNGNKLSED---DVSERIQQSLG 104
F+VT +G LS D +V+ ++++LG
Sbjct: 786 AFYVTGTDGEPLSPDRAAEVAREVEKALG 814
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + + V A V+T G+ AV+ FYV G P+ + V
Sbjct: 746 IEVRAQDAPGLLHRIGRALEGSAVRVRSAHVSTLGANAVDAFYVTGTDGEPLSPDRAAEV 805
Query: 400 RKEI 403
+E+
Sbjct: 806 AREV 809
>gi|311280864|ref|YP_003943095.1| UTP-GlnB uridylyltransferase, GlnD [Enterobacter cloacae SCF1]
gi|308750059|gb|ADO49811.1| UTP-GlnB uridylyltransferase, GlnD [Enterobacter cloacae SCF1]
Length = 887
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 33/173 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + LE AI + T + +
Sbjct: 749 FIVLEPDGSPLSGD-RHEAIRRGLEQAITQTTWQPPAPRRQPAKLRHFTVDTEVTFLPTH 807
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
LEL D+ GLL+ V ++F + G+S+ A +TT G + ++F + A
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATA 860
>gi|84499734|ref|ZP_00998022.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
gi|84392878|gb|EAQ05089.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
Length = 919
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + NV+ A +T A+ + +A G P + + ++++++
Sbjct: 738 DHPGIFSRLAGALALVGANVVDARTFTSKDGYATAAFWIQDADGHPYESA-RIPRLRQMI 796
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
L LKG+ R A S D K R ++ A +++ GS
Sbjct: 797 LKTLKGEVVPREAMK--SRDKIKKRERAFRVSTA-----ISFDNEGS------------- 836
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ +T++ + DRP LLFD TL + A + + +Y++ + G +
Sbjct: 837 ---EIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDMFGLKL 893
Query: 314 SSEAERQRVINCLEAAIKRRTSEG 337
SE +++ LEA ++ SEG
Sbjct: 894 YSETKQK----ALEAKLREAISEG 913
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 31/141 (21%)
Query: 286 VVYHATVIAESPEAYQEYYIRHVDGNPISSEA---ERQRVINCLEAAI------------ 330
VV T ++ A ++I+ DG+P S RQ ++ L+ +
Sbjct: 757 VVDARTFTSKDGYATAAFWIQDADGHPYESARIPRLRQMILKTLKGEVVPREAMKSRDKI 816
Query: 331 -KR----RTSEGIS-----------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRG 374
KR R S IS +E+ DR LL D+TR + ++ A + T G
Sbjct: 817 KKRERAFRVSTAISFDNEGSEIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYG 876
Query: 375 SQAVNVFYVVDASGNPVKSET 395
Q V+ FYV D G + SET
Sbjct: 877 EQVVDTFYVKDMFGLKLYSET 897
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
++ DN + T+I+VD+ ++ L +L + L ++ I A I++ GE +D F+V D
Sbjct: 829 ISFDNEGSEIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDM 888
Query: 86 NGNKLSEDDVSERIQQSLGPRAR 108
G KL SE Q++L + R
Sbjct: 889 FGLKL----YSETKQKALEAKLR 907
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS 278]
gi|166226140|sp|A4YKP3.1|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 278]
Length = 931
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
S+ Q + +T IE++G DRPGLL E+ +S L N+ A V T R V Y+T +
Sbjct: 840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DL 898
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGD 200
G I+ P A IK LL++L +
Sbjct: 899 LGAQINAPTRQAAIKSALLHLLASE 923
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V+++N + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E +I + SE + +E+ DR GLL ++T + L++ A V T G +A +VFYV D
Sbjct: 838 EVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 386 ASGNPVKSETIESVRKEIGLTILRVKDDA 414
G + + T ++ K L +L +D A
Sbjct: 898 LLGAQINAPTRQAAIKSALLHLLASEDAA 926
>gi|367474181|ref|ZP_09473703.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
gi|365273525|emb|CCD86171.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
Length = 931
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
S+ Q + +T IE++G DRPGLL E+ +S L N+ A V T R V Y+T +
Sbjct: 840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DL 898
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGD 200
G I+ P A IK LL++L +
Sbjct: 899 LGAQINAPTRQAAIKSALLHLLASE 923
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V+++N + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E +I + SE + +E+ DR GLL ++T + L++ A V T G +A +VFYV D
Sbjct: 838 EVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 386 ASGNPVKSETIESVRKEIGLTILRVKDDA 414
G + + T ++ K L +L +D A
Sbjct: 898 LLGAQINAPTRQAAIKSALLHLLASEDAA 926
>gi|162147864|ref|YP_001602325.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542483|ref|YP_002274712.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786441|emb|CAP56023.1| putative uridylyltransferase (PII uridylyl transferase)
(Uridylyl-removing enzyme) (UTase) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530160|gb|ACI50097.1| UTP-GlnB uridylyltransferase, GlnD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 989
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+ GRDRPGLL +V +SD K + A + T+ R V Y+ + GL I D
Sbjct: 898 YTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV-KDLFGLKITDER 956
Query: 185 TLAKIKRLLLYVLK 198
L +I+ LL+ L+
Sbjct: 957 RLGEIREALLHGLR 970
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL DVT+ ++ L + A +TT G +AV+VFYV D G + E
Sbjct: 901 IEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFGLKITDERRLGE 960
Query: 400 RKEIGLTILRVKDDAYSK--SPPQES 423
+E L LR ++A + PP ES
Sbjct: 961 IREALLHGLRQAEEAMTSEIGPPAES 986
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+++ ++ G L ++ Q ++D L I A+I++ G +DVF+V
Sbjct: 885 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 944
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++++ I+++L
Sbjct: 945 KDLFGLKITDERRLGEIREAL 965
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 27/216 (12%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S + L+ +++ A + T + MA + +A G ++P
Sbjct: 786 TEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEAFEEPHQ 845
Query: 186 LAKIKRLLLYVLKGDRD-KRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
LA++ L+ L G D + +A + + R +H
Sbjct: 846 LARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH---------------------- 883
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P V +++ YTV+ + DRP LL D ++D + + A + A +Y
Sbjct: 884 VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFY 943
Query: 305 IRHVDGNPISSEAE----RQRVINCLEAAIKRRTSE 336
++ + G I+ E R+ +++ L A + TSE
Sbjct: 944 VKDLFGLKITDERRLGEIREALLHGLRQAEEAMTSE 979
>gi|17226253|gb|AAL37712.1|AF397025_2 uridylyltransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 990
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+ GRDRPGLL +V +SD K + A + T+ R V Y+ + GL I D
Sbjct: 899 YTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV-KDLFGLKITDER 957
Query: 185 TLAKIKRLLLYVLK 198
L +I+ LL+ L+
Sbjct: 958 RLGEIREALLHGLR 971
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+++ ++ G L ++ Q ++D L I A+I++ G +DVF+V
Sbjct: 886 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 945
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++++ I+++L
Sbjct: 946 KDLFGLKITDERRLGEIREAL 966
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL DVT+ ++ L + A +TT G +AV+VFYV D G + E
Sbjct: 902 IEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFGLKITDERRLGE 961
Query: 400 RKEIGLTILRVKDDAYSK--SPPQES 423
+E L LR ++A + PP ES
Sbjct: 962 IREALLHGLRQAEEAMTSEIGPPAES 987
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 27/216 (12%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S + L+ +++ A + T + MA + +A G ++P
Sbjct: 787 TEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEAFEEPHQ 846
Query: 186 LAKIKRLLLYVLKGDRD-KRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
LA++ L+ L G D + +A + + R +H
Sbjct: 847 LARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH---------------------- 884
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P V +++ YTV+ + DRP LL D ++D + + A + A +Y
Sbjct: 885 VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFY 944
Query: 305 IRHVDGNPISSEAE----RQRVINCLEAAIKRRTSE 336
++ + G I+ E R+ +++ L A + TSE
Sbjct: 945 VKDLFGLKITDERRLGEIREALLHGLRQAEEAMTSE 980
>gi|365858204|ref|ZP_09398157.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
gi|363714593|gb|EHL98089.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
Length = 932
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 77 MDVFHVTDQNGNKLSEDD----VSERIQQSLGPRA---RSFRSLRRS------------- 116
+D F V D G +S I+Q+L R + R +RR
Sbjct: 782 LDTFWVQDAQGGAFDSPHKLARLSVLIEQALSGRLNLDQEIRKVRREPSRLRAVQVPGRV 841
Query: 117 -VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ A+ HT IEL GRDRPGLL ++ A +S+ + A + T+ R V Y+ +
Sbjct: 842 VIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYV-KDV 900
Query: 176 TGLPIDDPDTLAKIKRLLLYVL 197
GL I++ LA ++ LL L
Sbjct: 901 FGLKIENERKLASLREALLAAL 922
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE-TIES 398
+EL DR GLL D+T E GL + A +TT G +AV+VFYV D G +++E + S
Sbjct: 854 IELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKIENERKLAS 913
Query: 399 VRKEI 403
+R+ +
Sbjct: 914 LREAL 918
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P RV +DN ++ T+I+++ ++ G L ++ +++ L I A+I++ G +DVF+V
Sbjct: 838 PGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYV 897
Query: 83 TDQNGNKLSED----DVSERIQQSLGP 105
D G K+ + + E + +LGP
Sbjct: 898 KDVFGLKIENERKLASLREALLAALGP 924
>gi|120599554|ref|YP_964128.1| PII uridylyl-transferase [Shewanella sp. W3-18-1]
gi|386313126|ref|YP_006009291.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella putrefaciens 200]
gi|120559647|gb|ABM25574.1| metal dependent phosphohydrolase [Shewanella sp. W3-18-1]
gi|319425751|gb|ADV53825.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella putrefaciens 200]
Length = 860
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 32/191 (16%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+ +PLV V T +G T + + C DRPK LF V + D + + H I S + Y
Sbjct: 659 QDEPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALD 717
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS------------- 339
+ I DG P+S + Q + LE A+ R+ S +
Sbjct: 718 TFVILEQDGEPVSQLSRIQSIRKALEKALSSDNPKLPRFRKLSRKMKPFHVPTQVSFLES 777
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+EL D GLL+ V IF +++ A++TT G +A + F + G +
Sbjct: 778 SRHGTSMMELIALDSPGLLAKVGDIFYRCNITLLAAKITTIGERAEDFFMLQTNDGLQLN 837
Query: 393 SETIESVRKEI 403
+ ++R+ +
Sbjct: 838 ATQENTLREAL 848
>gi|271963324|ref|YP_003337520.1| (protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
gi|270506499|gb|ACZ84777.1| (Protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
Length = 761
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 262 VNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDG---NPISSEAE 318
V + PDR LL+ A L + VV A+ + A E+ + G +P + EA+
Sbjct: 586 VTVVAPDRAGLLWRAAGVLAAHRMVVRAASAASAGSTAVIEFAVVPEYGSPPDPATLEAD 645
Query: 319 RQRVINC---LEAAIKRRT----------------------SEGISLELCCEDRAGLLSD 353
+ V+ +E + RRT + +E+ DR GLL
Sbjct: 646 LRLVLAGRLDIEQRLARRTRSLRPARVPVAPPRVTLVDDASNTATVVEVRAHDRPGLLWR 705
Query: 354 VTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILR 409
+ R F + GL V A V T G++AV+VFYVVD +G P+ E + ++ L LR
Sbjct: 706 IGRAFGDCGLDVRAARVETLGAEAVDVFYVVDRAGRPLTDEAQRAQVRDQVLAALR 761
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 21 MNPPRVT-VDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDV 79
+ PPRVT VD+ SN AT+++V + ++ G L + + D L +R A + + G +DV
Sbjct: 674 VAPPRVTLVDDASN-TATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDV 732
Query: 80 FHVTDQNGNKLSEDDVSERIQ 100
F+V D+ G L+ D ++R Q
Sbjct: 733 FYVVDRAGRPLT--DEAQRAQ 751
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Query: 99 IQQSLGPRARSFRSLRRSVGV-------QAALEHTTIELTGRDRPGLLSEVFAVLSDLKC 151
I+Q L R RS R R V A+ T +E+ DRPGLL + D
Sbjct: 656 IEQRLARRTRSLRPARVPVAPPRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGL 715
Query: 152 NVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
+V A V T + V Y+ A G P+ D A+++ +L L+
Sbjct: 716 DVRAARVETLGAEAVDVFYVVDRA-GRPLTDEAQRAQVRDQVLAALR 761
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
+ P VT+ TVV +R DRP LL+ D V A V EA +Y
Sbjct: 675 APPRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDVFY 734
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIK 331
+ G P++ EA+R +V + + AA++
Sbjct: 735 VVDRAGRPLTDEAQRAQVRDQVLAALR 761
>gi|226945943|ref|YP_002801016.1| PII uridylyl-transferase [Azotobacter vinelandii DJ]
gi|548353|sp|P36223.1|GLND_AZOVI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492000|sp|C1DSU8.1|GLND_AZOVD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|39257|emb|CAA42173.1| uridylyl transferase [Azotobacter vinelandii]
gi|226720870|gb|ACO80041.1| protein-P-II uridylyltransferase [Azotobacter vinelandii DJ]
Length = 899
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI + +
Sbjct: 689 PLVLIKETTQREFEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDT 748
Query: 303 YYIRHVDG-----NPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG NP + RQ ++ L I+RR +
Sbjct: 749 YIVLDADGGSIGNNPARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + +IF + LS+ A++ T G + +VF+V DA P+
Sbjct: 809 DALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTDAHNQPL 868
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ D DL ++ A I++ GE DVF VT
Sbjct: 802 PQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVT 861
Query: 84 DQNGNKLSEDDVSERIQQSLG 104
D + LS+ ++ R+Q ++
Sbjct: 862 DAHNQPLSDPELCARLQLAIA 882
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ AT I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVS-ERIQQSLG-----------------PRARSFRSLRRSVGVQA 121
+ V D +G + + + I+Q L PR + V +Q
Sbjct: 749 YIVLDADGGSIGNNPARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQN 808
Query: 122 -ALEHTTI-ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
AL TI E+ DRPGLL+ + + D ++ A++ T R+ V ++T +A P
Sbjct: 809 DALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVT-DAHNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP+ A+++
Sbjct: 868 LSDPELCARLQ 878
>gi|399006249|ref|ZP_10708777.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
gi|398122708|gb|EJM12294.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + +LS+ + R+Q ++
Sbjct: 861 TDAHNQQLSDPQLCSRLQDAI 881
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 85/217 (39%), Gaps = 40/217 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I + +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQQL 868
Query: 392 KSETIESVRKEIGLTILRVKDDAYSKSPPQESGRFSL 428
+ S ++ + L V S+ PP R S
Sbjct: 869 SDPQLCSRLQDAIVEQLSV-----SQEPPTALTRLSF 900
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRV-PRQLKHFAFPPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQ 866
Query: 179 PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+ DP ++++ ++ L ++ +A T +S
Sbjct: 867 QLSDPQLCSRLQDAIVEQLSVSQEPPTALTRLS 899
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R V Y+T + G I P
Sbjct: 867 YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPT 925
Query: 185 TLAKIKRLLLYVL-KGDRDKRSA 206
A IKR L+++L GD ++ A
Sbjct: 926 RQAAIKRALVHLLANGDAAEKPA 948
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + + T+I+V ++ G L +L ++ L+L I A++++ GE DVF+VT
Sbjct: 855 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 914
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 915 DLLGAQITAPTRQAAIKRAL 934
>gi|423118754|ref|ZP_17106438.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5246]
gi|376400820|gb|EHT13431.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5246]
Length = 887
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP++ + S +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 690 SKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS---------------------- 339
+ + DG+P+S A+R +I + LE I +R+ + +
Sbjct: 749 FIVLEPDGSPLS--ADRHEMIRHGLEQTITQRSWQPPAPRRQAAKLRHFSVVTEVNFLPT 806
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V ++F + +S+ A +TT G + ++F + A +
Sbjct: 807 HTDRKSFLELIALDQPGLLARVGQVFADLNISLHGARITTIGERVEDLFIIATADRRGLN 866
Query: 393 SETIESVRKEI 403
+ + V++ +
Sbjct: 867 NALQQEVQQRL 877
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + + + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 689 LSKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGM-AMD 747
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPR--ARSFRSLRRSVGVQAALEH 125
F V + +G+ LS E +++R Q PR A R V H
Sbjct: 748 TFIVLEPDGSPLSADRHEMIRHGLEQTITQRSWQPPAPRRQAAKLRHFSVVTEVNFLPTH 807
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
T +EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLNISLHGARITTIGERVEDLFIIATADRRGL 865
>gi|425897799|ref|ZP_18874390.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892389|gb|EJL08867.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + +LS+ + R+Q ++
Sbjct: 861 TDAHNQQLSDPQLCSRLQDAI 881
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 35/175 (20%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG I + +R + I EA I+RR +
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDA 863
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 27/192 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKL-------------------SEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRV-PRQLKHFAFPPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQ 866
Query: 179 PIDDPDTLAKIK 190
+ DP ++++
Sbjct: 867 QLSDPQLCSRLQ 878
>gi|146292449|ref|YP_001182873.1| PII uridylyl-transferase [Shewanella putrefaciens CN-32]
gi|145564139|gb|ABP75074.1| metal dependent phosphohydrolase [Shewanella putrefaciens CN-32]
Length = 860
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 32/191 (16%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+ +PLV V T +G T + + C DRPK LF V + D + + H I S + Y
Sbjct: 659 QDEPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALD 717
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS------------- 339
+ I DG P+S + Q + LE A+ R+ S +
Sbjct: 718 TFVILEQDGEPVSQLSRIQSIRKALEKALSSDNPKLPRFRKLSRKMKPFHVPTQVSFLES 777
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+EL D GLL+ V IF +++ A++TT G +A + F + G +
Sbjct: 778 SRHGTSMMELIALDSPGLLAKVGDIFYRCNITLLAAKITTIGERAEDFFMLQTNDGLQLN 837
Query: 393 SETIESVRKEI 403
+ ++R+ +
Sbjct: 838 ATQENTLREAL 848
>gi|50402114|sp|P62223.1|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R V Y+T + G I P
Sbjct: 847 YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPT 905
Query: 185 TLAKIKRLLLYVL-KGDRDKRSA 206
A IKR L+++L GD ++ A
Sbjct: 906 RQAAIKRALVHLLANGDAAEKPA 928
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + + T+I+V ++ G L +L ++ L+L I A++++ GE DVF+VT
Sbjct: 835 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 895 DLLGAQITAPTRQAAIKRAL 914
>gi|83952474|ref|ZP_00961205.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
gi|83836147|gb|EAP75445.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
Length = 923
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + NV+ A +T A+ + +A G P + D L ++++++
Sbjct: 742 DHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDADGHPFE-ADRLPRLRQMI 800
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
L+G+ R A S D K R + R +T ++
Sbjct: 801 DKTLRGEVIPREAIK--SRDKIKKRER---------------------AFRVPTHITFDN 837
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ YT++ + DRP LL+D TL + + A + + +Y++ + G
Sbjct: 838 DGSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDMFGLKF 897
Query: 314 SSEAERQRVINCLEAAI 330
SEA+++ + L AI
Sbjct: 898 HSEAKQRSLDRKLREAI 914
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +T DN + T+I+VD+ ++ G L +L + L L++ I A I++ GE +D F+V
Sbjct: 830 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYV 889
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRAR 108
D G K SE Q+SL + R
Sbjct: 890 KDMFGLKFH----SEAKQRSLDRKLR 911
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLL D+TR + + A + T G Q V+ FYV D G SE
Sbjct: 846 IEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDMFGLKFHSEA 901
>gi|432552204|ref|ZP_19788938.1| [protein-PII] uridylyltransferase [Escherichia coli KTE47]
gi|431087903|gb|ELD93824.1| [protein-PII] uridylyltransferase [Escherichia coli KTE47]
Length = 890
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKP V + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPRVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAI---------KRRTSEGIS------------- 339
+ + DG+P+S A+R VI LE + RR +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|317493191|ref|ZP_07951614.1| protein-P-II uridylyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918851|gb|EFV40187.1| protein-P-II uridylyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 889
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 33/173 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV V +G T + + PDRP LF AV D + + H I + + A
Sbjct: 692 SKPLVLVSHLATRGGTEIFIYSPDRP-YLFAAVAGELDRRNLSVHDAQIFTNRDNFAMDT 750
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS-------------- 339
+ + DG+P++ + + + LE A+ RR S +
Sbjct: 751 FVVLEPDGSPLAQD-RHATIKHSLEQALTQQHYRHPRTRRPSPKLRHFTVPTEVSFLPMH 809
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
+EL D+ GLL+ V +F E GLS+ A +TT G + ++F + D
Sbjct: 810 NERRSYMELVALDQPGLLAQVGEVFAEMGLSLHSARITTIGERVEDLFILADG 862
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R V Y+T + G I P
Sbjct: 851 YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPT 909
Query: 185 TLAKIKRLLLYVL-KGDRDKRSA 206
A IKR L+++L GD ++ A
Sbjct: 910 RQAAIKRALVHLLANGDAAEKPA 932
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + + T+I+V ++ G L +L ++ L+L I A++++ GE DVF+VT
Sbjct: 839 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
>gi|22127015|ref|NP_670438.1| PII uridylyl-transferase [Yersinia pestis KIM10+]
gi|45442577|ref|NP_994116.1| PII uridylyl-transferase [Yersinia pestis biovar Microtus str.
91001]
gi|149366957|ref|ZP_01888990.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|167468856|ref|ZP_02333560.1| PII uridylyl-transferase [Yersinia pestis FV-1]
gi|170023313|ref|YP_001719818.1| PII uridylyl-transferase [Yersinia pseudotuberculosis YPIII]
gi|218928210|ref|YP_002346085.1| PII uridylyl-transferase [Yersinia pestis CO92]
gi|21960062|gb|AAM86689.1|AE013914_9 protein PII [Yersinia pestis KIM10+]
gi|45437442|gb|AAS62993.1| [protein-PII] uridylyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|115346821|emb|CAL19707.1| [protein-PII] uridylyltransferase [Yersinia pestis CO92]
gi|149290571|gb|EDM40647.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|169749847|gb|ACA67365.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
YPIII]
Length = 912
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 36/196 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + PDRP L F AV D + + H I + + A
Sbjct: 714 TKPLVLVSRQATRGGTEIFIWSPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 772
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKR----------RTSEGIS------------ 339
+ + DG+P++ + R +I + L+ AI R R S +
Sbjct: 773 FIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLP 830
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL D+ GLL+ V +IF + GLS+ A +TT G + ++F + D +
Sbjct: 831 THNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRAL 890
Query: 392 KSETIESVRKEIGLTI 407
ET + + + T+
Sbjct: 891 SLETRRELAQRLADTL 906
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 716 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 775
Query: 83 TDQNGNKLSEDD---VSERIQQSLG-------PRARSFRSLRR--SVGVQAAL------E 124
+ +G+ L++D +S +QQ++ PR R R SV +A
Sbjct: 776 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 835
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 836 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLA 883
>gi|188533034|ref|YP_001906831.1| PII uridylyl-transferase [Erwinia tasmaniensis Et1/99]
gi|188028076|emb|CAO95933.1| [Protein-PII] uridylyltransferase [Erwinia tasmaniensis Et1/99]
Length = 885
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PL+ V +G T + + PDRP LF AV D + + H I S + A
Sbjct: 688 SQPLILVSPLATRGGTEIFIWSPDRP-YLFAAVAGELDKRNLSVHDAQIFTSRDGMAMDT 746
Query: 303 YYIRHVDGNPISS---EAERQRV-----------------------------INCLEAAI 330
+ + DG+P+++ EA R + +N L
Sbjct: 747 FIVLEPDGSPLATDRHEATRHALEQAICQTDWQPPRTRRQSARLKHFNVETSVNFLPTHT 806
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
RRT LEL DR GLL+ V +F + G+S+ A ++T G + ++F + D+
Sbjct: 807 DRRTY----LELVALDRPGLLACVGEVFADLGVSLHGARISTIGERVEDLFILADSERRA 862
Query: 391 VKSETIESVRKEI 403
+ +E E +++ +
Sbjct: 863 LDTELREVLQQRL 875
>gi|357030935|ref|ZP_09092879.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
gi|356415629|gb|EHH69272.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
Length = 945
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLN--DLDLIIRRAYISSDGEWFMDV 79
+P V +R T + V A+ G ++ L ++ R + SDG +D
Sbjct: 736 SPVTVEAYPIPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDG-MALDT 794
Query: 80 FHVTDQNG------------NKLSEDDVSERIQQSLGPRARSFRSLRRSVGV-------- 119
F V D G N L E +S R+ G S L R +
Sbjct: 795 FWVQDAEGCSFEEPHQLGRLNHLVEQALSGRLDIRQGIAEASHHGLSRRMRAIHVPPRVV 854
Query: 120 ---QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEAT 176
A+ HT IE+ GRDRPGLL +V + LS + A + T+ R V Y+ +
Sbjct: 855 IDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYV-RDLL 913
Query: 177 GLPIDDPDTLAKIKRLLLYVL 197
G+ I DP L +I+ LL L
Sbjct: 914 GMKIVDPVRLNRIREALLASL 934
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 21/197 (10%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S++ L+ +++ A + T + MA + +A G ++P L ++ L+
Sbjct: 759 DHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAEGCSFEEPHQLGRLNHLV 818
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
L G D R ++ S H R + ++ P V +++
Sbjct: 819 EQALSGRLDIRQG---IAEASHHGLSRRMRAIHV------------------PPRVVIDN 857
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+TV+ + DRP LL D L+ + A + A +Y+R + G I
Sbjct: 858 TASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYVRDLLGMKI 917
Query: 314 SSEAERQRVINCLEAAI 330
R+ L A++
Sbjct: 918 VDPVRLNRIREALLASL 934
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 41/206 (19%)
Query: 228 DRDYDMNYAESGSASGRSKPLVTVES--CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQY 285
D D M +A S R + VTVE+ D+G T + + C D P L L
Sbjct: 717 DTDTHMRHARMIHDSDRYRSPVTVEAYPIPDRGVTELTVLCADHPGLFSQIAGALAVAGA 776
Query: 286 VVYHATVIAESPE-AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRR----------T 334
+ A + S A ++++ +G + R+ + +E A+ R +
Sbjct: 777 SIVDARIHTLSDGMALDTFWVQDAEGCSFEEPHQLGRLNHLVEQALSGRLDIRQGIAEAS 836
Query: 335 SEGIS------------------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
G+S +E+ DR GLL DVT L ++ A +
Sbjct: 837 HHGLSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHI 896
Query: 371 TTRGSQAVNVFYVVDASG----NPVK 392
TT G +AV+VFYV D G +PV+
Sbjct: 897 TTYGMRAVDVFYVRDLLGMKIVDPVR 922
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R V Y+T + G I P
Sbjct: 851 YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPT 909
Query: 185 TLAKIKRLLLYVL-KGDRDKRSA 206
A IKR L+++L GD ++ A
Sbjct: 910 RQAAIKRALVHLLANGDAAEKPA 932
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + + T+I+V ++ G L +L ++ L+L I A++++ GE DVF+VT
Sbjct: 839 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
>gi|290957105|ref|YP_003488287.1| protein P-II uridylyltransferase [Streptomyces scabiei 87.22]
gi|260646631|emb|CBG69728.1| putative protein P-II uridylyltransferase [Streptomyces scabiei
87.22]
Length = 816
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV ++R AT+I+V + + G L + + L D L +R A++S+ G +D F+V
Sbjct: 731 PPRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T +G L D+ V+ +++++L
Sbjct: 791 TGTDGAPLPGDEAASVARKLEETL 814
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + L V A V+T G+ AV+ FYV G P+ + SV
Sbjct: 747 IEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVTGTDGAPLPGDEAASV 806
Query: 400 RKEIGLTI 407
+++ T+
Sbjct: 807 ARKLEETL 814
>gi|456388589|gb|EMF54029.1| glnD protein [Streptomyces bottropensis ATCC 25435]
Length = 816
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV ++R AT+I+V + + G L + + L D L +R A++S+ G +D F+V
Sbjct: 731 PPRVTVAPAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T +G L D+ V+ +++++L
Sbjct: 791 TGTDGAPLPGDEAASVARKLEETL 814
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + L V A V+T G+ AV+ FYV G P+ + SV
Sbjct: 747 IEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVTGTDGAPLPGDEAASV 806
Query: 400 RKEIGLTI 407
+++ T+
Sbjct: 807 ARKLEETL 814
>gi|402773665|ref|YP_006593202.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
gi|401775685|emb|CCJ08551.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
Length = 936
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V VDN+ + T+I+V ++ G L EL ++ L+L I A+I + GE +D F+VT
Sbjct: 837 PEVVVDNSLSNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL-----GPRARSFRS 112
D G K++ I++ L GP AR ++
Sbjct: 897 DLTGAKIASPQRQAAIKRQLLDVFGGPGARGAKT 930
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DR GLL E+ +S L N+ A + T R Y+T + TG I P
Sbjct: 849 YTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVT-DLTGAKIASPQ 907
Query: 185 TLAKIKRLLLYVLKG 199
A IKR LL V G
Sbjct: 908 RQAAIKRQLLDVFGG 922
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T L++ A + T G +AV+ FYV D +G + S ++
Sbjct: 852 IEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVTDLTGAKIASPQRQAA 911
Query: 400 RKEIGLTILRVKDDAYSKSP 419
K L + +K+P
Sbjct: 912 IKRQLLDVFGGPGARGAKTP 931
>gi|420852309|ref|ZP_15316947.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
gi|391732820|gb|EIT61338.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
Length = 891
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 36/196 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + PDRP L F AV D + + H I + + A
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWSPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKR----------RTSEGIS------------ 339
+ + DG+P++ + R +I + L+ AI R R S +
Sbjct: 754 FIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLP 811
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL D+ GLL+ V +IF + GLS+ A +TT G + ++F + D +
Sbjct: 812 THNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRAL 871
Query: 392 KSETIESVRKEIGLTI 407
ET + + + T+
Sbjct: 872 SLETRRELAQRLADTL 887
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSLG-------PRARSFRSLRR--SVGVQAAL------E 124
+ +G+ L++D +S +QQ++ PR R R SV +A
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLA 864
>gi|108806513|ref|YP_650429.1| PII uridylyl-transferase [Yersinia pestis Antiqua]
gi|108813119|ref|YP_648886.1| PII uridylyl-transferase [Yersinia pestis Nepal516]
gi|145598953|ref|YP_001163029.1| PII uridylyl-transferase [Yersinia pestis Pestoides F]
gi|153946912|ref|YP_001399995.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 31758]
gi|162421348|ref|YP_001607773.1| PII uridylyl-transferase [Yersinia pestis Angola]
gi|165927056|ref|ZP_02222888.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939842|ref|ZP_02228382.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011922|ref|ZP_02232820.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211324|ref|ZP_02237359.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399773|ref|ZP_02305291.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419478|ref|ZP_02311231.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425260|ref|ZP_02317013.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229837749|ref|ZP_04457909.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|229840971|ref|ZP_04461130.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229843072|ref|ZP_04463222.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229903561|ref|ZP_04518674.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|270487342|ref|ZP_06204416.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294503059|ref|YP_003567121.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|384121499|ref|YP_005504119.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|384125673|ref|YP_005508287.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|384141091|ref|YP_005523793.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|384413672|ref|YP_005623034.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420545665|ref|ZP_15043744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|420550968|ref|ZP_15048489.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|420556475|ref|ZP_15053365.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|420562065|ref|ZP_15058261.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|420567089|ref|ZP_15062800.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|420572758|ref|ZP_15067950.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|420578086|ref|ZP_15072772.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|420583421|ref|ZP_15077624.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|420588573|ref|ZP_15082266.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|420593889|ref|ZP_15087058.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|420599592|ref|ZP_15092159.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|420605051|ref|ZP_15097038.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|420610412|ref|ZP_15101885.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|420615712|ref|ZP_15106577.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|420621124|ref|ZP_15111351.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|420626166|ref|ZP_15115918.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|420636457|ref|ZP_15125179.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|420642053|ref|ZP_15130233.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|420647183|ref|ZP_15134929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|420652835|ref|ZP_15140002.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|420658345|ref|ZP_15144958.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|420663678|ref|ZP_15149726.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|420668650|ref|ZP_15154232.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|420673944|ref|ZP_15159049.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|420679489|ref|ZP_15164079.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|420684734|ref|ZP_15168782.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|420689909|ref|ZP_15173366.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|420695728|ref|ZP_15178458.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|420701095|ref|ZP_15183052.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|420707106|ref|ZP_15187933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|420712418|ref|ZP_15192723.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|420717821|ref|ZP_15197459.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|420723425|ref|ZP_15202276.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|420729057|ref|ZP_15207305.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|420734102|ref|ZP_15211856.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|420739572|ref|ZP_15216786.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|420744908|ref|ZP_15221485.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|420750699|ref|ZP_15226436.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|420755963|ref|ZP_15231009.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|420761839|ref|ZP_15235802.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|420767061|ref|ZP_15240513.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|420772050|ref|ZP_15244994.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|420777488|ref|ZP_15249858.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|420782988|ref|ZP_15254671.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|420788341|ref|ZP_15259387.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|420793815|ref|ZP_15264328.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|420798934|ref|ZP_15268933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|420804282|ref|ZP_15273744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|420809549|ref|ZP_15278518.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|420815238|ref|ZP_15283613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|420820411|ref|ZP_15288296.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|420825508|ref|ZP_15292851.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|420831275|ref|ZP_15298064.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|420836129|ref|ZP_15302443.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|420841271|ref|ZP_15307101.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|420846889|ref|ZP_15312173.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|420857822|ref|ZP_15321636.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|421762492|ref|ZP_16199289.1| PII uridylyl-transferase [Yersinia pestis INS]
gi|21362571|sp|Q8ZH68.2|GLND_YERPE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122980003|sp|Q1CFE4.1|GLND_YERPN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|123072950|sp|Q1CAN8.1|GLND_YERPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166232257|sp|A4TL94.1|GLND_YERPP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166990448|sp|A7FFG7.1|GLND_YERP3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238687289|sp|A9R397.1|GLND_YERPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|108776767|gb|ABG19286.1| (protein-PII) uridylyltransferase [Yersinia pestis Nepal516]
gi|108778426|gb|ABG12484.1| (protein-PII) uridylyltransferase [Yersinia pestis Antiqua]
gi|145210649|gb|ABP40056.1| (protein-PII) uridylyltransferase [Yersinia pestis Pestoides F]
gi|152958407|gb|ABS45868.1| protein-P-II uridylyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162354163|gb|ABX88111.1| protein-P-II uridylyltransferase [Yersinia pestis Angola]
gi|165912245|gb|EDR30882.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920952|gb|EDR38176.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989188|gb|EDR41489.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207095|gb|EDR51575.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962219|gb|EDR58240.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050481|gb|EDR61889.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055660|gb|EDR65444.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229679331|gb|EEO75434.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|229689948|gb|EEO82007.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697337|gb|EEO87384.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704126|gb|EEO91138.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|262361095|gb|ACY57816.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|262365337|gb|ACY61894.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|270335846|gb|EFA46623.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294353518|gb|ADE63859.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|320014176|gb|ADV97747.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342856220|gb|AEL74773.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|391429975|gb|EIQ91756.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|391431125|gb|EIQ92735.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|391433526|gb|EIQ94853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|391446182|gb|EIR06245.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|391446790|gb|EIR06785.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|391450718|gb|EIR10319.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|391462288|gb|EIR20815.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|391463605|gb|EIR21997.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|391465595|gb|EIR23774.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|391479011|gb|EIR35853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|391480139|gb|EIR36844.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|391480383|gb|EIR37060.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|391494241|gb|EIR49495.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|391495407|gb|EIR50510.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|391498131|gb|EIR52924.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|391510216|gb|EIR63773.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|391515089|gb|EIR68138.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|391525731|gb|EIR77846.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|391528582|gb|EIR80384.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|391529444|gb|EIR81128.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|391542257|gb|EIR92732.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|391544003|gb|EIR94268.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|391544974|gb|EIR95120.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|391559083|gb|EIS07898.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|391559648|gb|EIS08382.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|391561235|gb|EIS09787.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|391574272|gb|EIS21199.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|391574858|gb|EIS21685.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|391586651|gb|EIS31929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|391587211|gb|EIS32406.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|391590188|gb|EIS34972.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|391603614|gb|EIS46779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|391603932|gb|EIS47047.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|391605164|gb|EIS48082.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|391617994|gb|EIS59482.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|391618549|gb|EIS59951.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|391625563|gb|EIS66037.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|391629625|gb|EIS69527.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|391641029|gb|EIS79505.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|391643627|gb|EIS81779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|391643718|gb|EIS81855.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|391653265|gb|EIS90247.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|391659125|gb|EIS95461.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|391664031|gb|EIS99803.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|391666070|gb|EIT01582.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|391672015|gb|EIT06896.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|391684241|gb|EIT17939.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|391685591|gb|EIT19109.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|391686547|gb|EIT19957.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|391698275|gb|EIT30597.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|391701914|gb|EIT33863.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|391702855|gb|EIT34691.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|391712365|gb|EIT43251.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|391718715|gb|EIT48932.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|391719043|gb|EIT49220.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|391729901|gb|EIT58834.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|391736472|gb|EIT64490.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|411176698|gb|EKS46713.1| PII uridylyl-transferase [Yersinia pestis INS]
Length = 893
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 36/196 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + PDRP L F AV D + + H I + + A
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWSPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKR----------RTSEGIS------------ 339
+ + DG+P++ + R +I + L+ AI R R S +
Sbjct: 754 FIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLP 811
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL D+ GLL+ V +IF + GLS+ A +TT G + ++F + D +
Sbjct: 812 THNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRAL 871
Query: 392 KSETIESVRKEIGLTI 407
ET + + + T+
Sbjct: 872 SLETRRELAQRLADTL 887
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSLG-------PRARSFRSLRR--SVGVQAAL------E 124
+ +G+ L++D +S +QQ++ PR R R SV +A
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLA 864
>gi|420631353|ref|ZP_15120613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
gi|391510963|gb|EIR64418.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
Length = 893
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 36/196 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + PDRP L F AV D + + H I + + A
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWSPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKR----------RTSEGIS------------ 339
+ + DG+P++ + R +I + L+ AI R R S +
Sbjct: 754 FIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQPPPRVRRLSPKLRHFSVPTEANFLP 811
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL D+ GLL+ V +IF + GLS+ A +TT G + ++F + D +
Sbjct: 812 THNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRAL 871
Query: 392 KSETIESVRKEIGLTI 407
ET + + + T+
Sbjct: 872 SLETRRELAQRLADTL 887
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSLG-------PRARSFRSLRR--SVGVQAAL------E 124
+ +G+ L++D +S +QQ++ PR R R SV +A
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQPPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLA 864
>gi|365837051|ref|ZP_09378433.1| protein-P-II uridylyltransferase [Hafnia alvei ATCC 51873]
gi|364562928|gb|EHM40755.1| protein-P-II uridylyltransferase [Hafnia alvei ATCC 51873]
Length = 908
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 33/173 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV V +G T + + PDRP LF AV D + + H I + + A
Sbjct: 711 SKPLVLVSHLATRGGTEIFIYSPDRP-YLFAAVAGELDRRNLSVHDAQIFTNRDNFAMDT 769
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS-------------- 339
+ + DG+P++ + + + LE A+ RR S +
Sbjct: 770 FVVLEPDGSPLAQD-RHATIKHSLEQALTQQHYRHPRTRRPSPKLRHFTVPTEVSFLPMH 828
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
+EL D+ GLL+ V +F E GLS+ A +TT G + ++F + D
Sbjct: 829 NERRSYMELVALDQPGLLAQVGEVFAEMGLSLHSARITTIGERVEDLFILADG 881
>gi|387890474|ref|YP_006320772.1| [protein-PII] uridylyltransferase [Escherichia blattae DSM 4481]
gi|414593662|ref|ZP_11443304.1| protein-PII uridylyltransferase [Escherichia blattae NBRC 105725]
gi|386925307|gb|AFJ48261.1| [protein-PII] uridylyltransferase [Escherichia blattae DSM 4481]
gi|403195270|dbj|GAB80956.1| protein-PII uridylyltransferase [Escherichia blattae NBRC 105725]
Length = 891
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 33/170 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PL+ V +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SQPLILVSPHASRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDS 752
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG P+S + + + + LE I +RT +
Sbjct: 753 FIVLEPDGTPLSGD-RHEAIRHGLEQTINQRTWQPPQPRRQPAKLRHFTVETEVSFLPTH 811
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
LEL D+ GLL+ V +IF + G+S+ A ++T G + ++F +
Sbjct: 812 TDRRSYLELTALDQPGLLARVGQIFADLGISLHGARISTIGERVEDLFII 861
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P + V ++R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 693 LSQPLILVSPHASRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 751
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G LS E +++R Q PR + + +V + + H
Sbjct: 752 SFIVLEPDGTPLSGDRHEAIRHGLEQTINQRTWQPPQPRRQPAKLRHFTVETEVSFLPTH 811
Query: 126 T----TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T +ELT D+PGLL+ V + +DL ++ GA + T R+ + I ++
Sbjct: 812 TDRRSYLELTALDQPGLLARVGQIFADLGISLHGARISTIGERVEDLFIIATQ 864
>gi|356558203|ref|XP_003547397.1| PREDICTED: uncharacterized protein LOC100793459 [Glycine max]
Length = 424
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 147/359 (40%), Gaps = 31/359 (8%)
Query: 38 LIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQN---GNKLSEDD 94
+I V+ +K G ++ +++ D L I + +S+DG W V V + S
Sbjct: 26 IITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIPYSVLLPMSCSYLI 85
Query: 95 VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVM 154
+ ER+Q+ P SF +++ ++ DR GLL +V VLS+L+ +
Sbjct: 86 LKERLQKICPPCLASFYVIQQPSRSSPVY---LLKFCCLDRKGLLHDVTKVLSELELTIQ 142
Query: 155 GAEV-WTHNSRMASVVYITSEATGLPIDD--PDTLAKIKRLLL-----YVLKGDRDKRSA 206
+V T + R+ + ++T L + +T ++ +L L+ +
Sbjct: 143 KVKVTTTPDGRVLDLFFVTDNKELLHTRNRQDETCERLNAVLRDSCISCELQLAGPEYEY 202
Query: 207 NTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRC 266
N +S S L + +D + A S + K VT+++ +T+V +RC
Sbjct: 203 NQGISSLSPALAEELFRCELSDNEVRAQ-ALSPDMTKLKKTNVTMDNSLSPAHTLVQIRC 261
Query: 267 PDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY--YIRHVDGNPISSEAE------ 318
D LL+D + TL D+ + + S Y++ +I+ DG I +
Sbjct: 262 ADHKGLLYDIMRTLKDLNMKISYGRFSPNS-MGYRDLDIFIQQKDGKKILDPEKQSALCS 320
Query: 319 --RQRVINCLEAAIKRRTSE-----GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
+Q +++ L I R + +EL R + DVT + G+ V AEV
Sbjct: 321 RLKQEMLHPLRVIIANRGPDTELLVANPVELSGMGRPRVFYDVTFALKTVGICVFSAEV 379
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 261 VVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY-IRHVDGNPISSE--- 316
++ + CPD+ L D + D + V + Y + I + P+S
Sbjct: 26 IITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIPYSVLLPMSCSYLI 85
Query: 317 -AERQRVI--NCLEA--AIKR--RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
ER + I CL + I++ R+S L+ CC DR GLL DVT++ E L++ + +
Sbjct: 86 LKERLQKICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTKVLSELELTIQKVK 145
Query: 370 VTTRG-SQAVNVFYVVD 385
VTT + +++F+V D
Sbjct: 146 VTTTPDGRVLDLFFVTD 162
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF--MDVFHVT 83
VT+DN+ + TL+++ A+ +G L ++++ L DL++ I S + + +D+F +
Sbjct: 244 VTMDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPNSMGYRDLDIF-IQ 302
Query: 84 DQNGNKLSEDD----VSERIQQSLGPRARSFRSLRRSVGVQA-ALEHTTIELTGRDRPGL 138
++G K+ + + + R++Q + R + + G L +EL+G RP +
Sbjct: 303 QKDGKKILDPEKQSALCSRLKQEM---LHPLRVIIANRGPDTELLVANPVELSGMGRPRV 359
Query: 139 LSEVFAVLSDLKCNVMGAEVWTHNS 163
+V L + V AEV H++
Sbjct: 360 FYDVTFALKTVGICVFSAEVGRHST 384
>gi|374986229|ref|YP_004961724.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
gi|297156881|gb|ADI06593.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
Length = 883
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + G++V A V+T G+ AV+ FYV DASG P++ V
Sbjct: 814 IEVRAQDAPGLLHRIGRALEDAGVTVRSAHVSTLGANAVDAFYVTDASGAPLQPMRAAEV 873
Query: 400 RKEIGLTI 407
KE+ T+
Sbjct: 874 AKEVERTL 881
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV S++ AT+I+V + + G L + + L D + +R A++S+ G +D F+V
Sbjct: 798 PPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEDAGVTVRSAHVSTLGANAVDAFYV 857
Query: 83 TDQNGNKLSE---DDVSERIQQSL 103
TD +G L +V++ ++++L
Sbjct: 858 TDASGAPLQPMRAAEVAKEVERTL 881
>gi|209883288|ref|YP_002287145.1| PII uridylyl-transferase [Oligotropha carboxidovorans OM5]
gi|209871484|gb|ACI91280.1| protein-P-II uridylyltransferase [Oligotropha carboxidovorans OM5]
Length = 942
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R+ V Y+T + G I P
Sbjct: 861 YTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT-DLMGAQITAPT 919
Query: 185 TLAKIKRLLLYVLKGDRDKRSA 206
A IKR L+++L R A
Sbjct: 920 RQAAIKRALVHLLSNADPTRGA 941
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 29 DNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGN 88
+N + T+I+V ++ G L +L ++ L L I A++++ GE DVF+VTD G
Sbjct: 854 NNQWSEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGA 913
Query: 89 KLSEDDVSERIQQSL 103
+++ I+++L
Sbjct: 914 QITAPTRQAAIKRAL 928
>gi|51597320|ref|YP_071511.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 32953]
gi|81638764|sp|Q667I7.1|GLND_YERPS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|51590602|emb|CAH22243.1| [protein-PII] uridylyltransferase [Yersinia pseudotuberculosis IP
32953]
Length = 893
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 36/196 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + PDRP L F AV D + + H I + + A
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWSPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIKR----------RTSEGIS------------ 339
+ + DG+P++ + R +I + L+ AI R R S +
Sbjct: 754 FIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLP 811
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL D+ GLL+ V +IF + GLS+ A +TT G + ++F + D +
Sbjct: 812 THNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRAL 871
Query: 392 KSETIESVRKEIGLTI 407
ET + + + T+
Sbjct: 872 SLETRRELAQRLADTL 887
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSLG-------PRARSFRSLRR--SVGVQAAL------E 124
+ +G+ L++D +S +QQ++ PR R R SV +A
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLA 864
>gi|398930982|ref|ZP_10664913.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
gi|398164505|gb|EJM52641.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
Length = 900
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDADGDSIGDNPARTKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 809 DAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 868
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R+ T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + R+Q ++
Sbjct: 862 DANNHPLSDPLLCSRLQDAI 881
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDADGDSIGDNPARTKQIRDGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A + T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNH 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|186896425|ref|YP_001873537.1| PII uridylyl-transferase [Yersinia pseudotuberculosis PB1/+]
gi|186699451|gb|ACC90080.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
PB1/+]
Length = 912
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 34/195 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
+KPLV V +G T + + PDRP L V L V+ A + A +
Sbjct: 714 TKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTF 773
Query: 304 YIRHVDGNPISSEAERQRVI-NCLEAAIKR----------RTSEGIS------------- 339
+ DG+P++ + R +I + L+ AI R R S +
Sbjct: 774 IVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPT 831
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + GLS+ A +TT G + ++F + D +
Sbjct: 832 HNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRALS 891
Query: 393 SETIESVRKEIGLTI 407
ET + + + T+
Sbjct: 892 LETRRELAQRLADTL 906
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 716 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 775
Query: 83 TDQNGNKLSEDD---VSERIQQSLG-------PRARSFRSLRR--SVGVQAAL------E 124
+ +G+ L++D +S +QQ++ PR R R SV +A
Sbjct: 776 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 835
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 836 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLA 883
>gi|337739621|ref|YP_004631349.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
gi|386028639|ref|YP_005949414.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336093707|gb|AEI01533.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336097285|gb|AEI05108.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
Length = 939
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R+ V Y+T + G I P
Sbjct: 858 YTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT-DLMGAQITAPT 916
Query: 185 TLAKIKRLLLYVLKGDRDKRSA 206
A IKR L+++L R A
Sbjct: 917 RQAAIKRALVHLLSNADPTRGA 938
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 29 DNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGN 88
+N + T+I+V ++ G L +L ++ L L I A++++ GE DVF+VTD G
Sbjct: 851 NNQWSEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGA 910
Query: 89 KLSEDDVSERIQQSL 103
+++ I+++L
Sbjct: 911 QITAPTRQAAIKRAL 925
>gi|389879349|ref|YP_006372914.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
gi|388530133|gb|AFK55330.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
Length = 933
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV +DN ++ T+I+V + ++ G L + VL+DL L I A++++ GE +D F+V
Sbjct: 825 PRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVK 884
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++ R+++ L
Sbjct: 885 DVFGLKITHQGKLTRVREEL 904
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T IE+T RDRPGLL + +VLSDL + A V T+ R Y+ + GL I
Sbjct: 837 QTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYV-KDVFGLKITHQG 895
Query: 185 TLAKIKRLLLYVL 197
L +++ LL L
Sbjct: 896 KLTRVREELLAAL 908
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE-TIES 398
+E+ DR GLL +T + + L+++ A V T G +AV+ FYV D G + + +
Sbjct: 840 IEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVKDVFGLKITHQGKLTR 899
Query: 399 VRKEI 403
VR+E+
Sbjct: 900 VREEL 904
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 23/197 (11%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D GL + V ++ N++ A + T MA + ++ DD +A+++ L+
Sbjct: 735 DHHGLFAGVAGAMALAGGNIVDARIVTTTDGMALDTFWVQDSDRSAYDDEVRVARMRDLV 794
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
L G E R + + A RD + + P V +++
Sbjct: 795 GRTLSG------------------ELRPAKALAARRD-----GPKRTDVFQVTPRVLIDN 831
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
TV+ + DRP LLF L+D+ + A V A +Y++ V G I
Sbjct: 832 RASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVKDVFGLKI 891
Query: 314 SSEAERQRVINCLEAAI 330
+ + + RV L AA+
Sbjct: 892 THQGKLTRVREELLAAL 908
>gi|238784877|ref|ZP_04628877.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
gi|238714194|gb|EEQ06206.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
Length = 892
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A A +KPLV V +G T + + PDRP L F AV D + + H I
Sbjct: 685 HARHLLAHDSTKPLVLVSHQATRGGTEIFIWSPDRPSL-FAAVVGELDRRNLSVHDAQIF 743
Query: 295 ESPE--AYQEYYIRHVDGNPISSEAERQRVI-NCLEAAIK---------RRTSEGIS--- 339
+ + A + + DG+P++ + R +I + LE A+ RR S +
Sbjct: 744 TNRDGMAMDTFVVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFS 801
Query: 340 -----------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFY 382
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F
Sbjct: 802 VPTETNFLPTHNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFV 861
Query: 383 VVDASGNPVKSET 395
+ D + ET
Sbjct: 862 LADKDRRALSVET 874
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFVV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRRSVGVQAALEH-------- 125
+ +G+ L++D +S ++Q++ PR R R V
Sbjct: 757 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVL 862
>gi|417710798|ref|ZP_12359807.1| protein-P-II uridylyltransferase [Shigella flexneri K-272]
gi|417715464|ref|ZP_12364402.1| protein-P-II uridylyltransferase [Shigella flexneri K-227]
gi|333011004|gb|EGK30423.1| protein-P-II uridylyltransferase [Shigella flexneri K-272]
gi|333021799|gb|EGK41048.1| protein-P-II uridylyltransferase [Shigella flexneri K-227]
Length = 890
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ LL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPRLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|294815365|ref|ZP_06774008.1| PII uridylyl-transferase [Streptomyces clavuligerus ATCC 27064]
gi|294327964|gb|EFG09607.1| PII uridylyl-transferase [Streptomyces clavuligerus ATCC 27064]
Length = 1015
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
VTVD ++R AT+I+V + + G L + Q L + +R A++S+ G +D F+VT
Sbjct: 934 VTVDPAASRDATVIEVRAQDAPGLLHRIGQALETAGVRVRSAHVSTLGAHAVDAFYVTGA 993
Query: 86 NGNKLSED---DVSERIQQSLG 104
+G +L ED ++++R++++LG
Sbjct: 994 DGLRLPEDTARELADRLERTLG 1015
>gi|429330794|ref|ZP_19211576.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
gi|428764574|gb|EKX86707.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
Length = 900
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 245 SKPLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AY 300
S PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 687 SGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTL 746
Query: 301 QEYYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS---------- 339
Y + DG I + +R + I + + I RR +
Sbjct: 747 DTYIVLDNDGGSIGNNPQRVKQIRDGLSDALRNPDDYPSIIHRRVPRQLKHFAFPPQVTI 806
Query: 340 ----------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
LEL DR GLL+ + +IF + LS+ A++ T G + +VF++ DA
Sbjct: 807 LNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITDADNQ 866
Query: 390 PVKSETIESVRKEIGLTILRVKDDAYSKS 418
P+ + S ++ + LRV + ++S
Sbjct: 867 PLSDPQLCSRLQDAIVEQLRVDQASGTES 895
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + ++ D DL ++ A I++ GE DVF +
Sbjct: 801 PPQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFI 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+Q ++
Sbjct: 861 TDADNQPLSDPQLCSRLQDAI 881
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G + + +R++Q + + R+ + R V Q L+H
Sbjct: 749 YIVLDNDGGSIGNN--PQRVKQIRDGLSDALRNPDDYPSIIHRRVPRQ--LKHFAFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + D ++ A++ T R+ V +IT +A
Sbjct: 805 TILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDR 201
P+ DP ++++ ++ L+ D+
Sbjct: 864 DNQPLSDPQLCSRLQDAIVEQLRVDQ 889
>gi|326443718|ref|ZP_08218452.1| PII uridylyl-transferase [Streptomyces clavuligerus ATCC 27064]
Length = 939
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
VTVD ++R AT+I+V + + G L + Q L + +R A++S+ G +D F+VT
Sbjct: 858 VTVDPAASRDATVIEVRAQDAPGLLHRIGQALETAGVRVRSAHVSTLGAHAVDAFYVTGA 917
Query: 86 NGNKLSED---DVSERIQQSLG 104
+G +L ED ++++R++++LG
Sbjct: 918 DGLRLPEDTARELADRLERTLG 939
>gi|398864639|ref|ZP_10620171.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
gi|398244757|gb|EJN30296.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
Length = 900
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +ELT DRPGLL+ V + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|419298356|ref|ZP_13840381.1| protein-P-II uridylyltransferase [Escherichia coli DEC11C]
gi|378158153|gb|EHX19183.1| protein-P-II uridylyltransferase [Escherichia coli DEC11C]
Length = 890
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ LL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPRLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|352106684|ref|ZP_08961627.1| PII uridylyl-transferase [Halomonas sp. HAL1]
gi|350597727|gb|EHA13855.1| PII uridylyl-transferase [Halomonas sp. HAL1]
Length = 891
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 57 LNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL------------ 103
+ L L I A I +S +W ++ F V D +G + + + E ++Q L
Sbjct: 730 MEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPNHIEEMRQHLVEELDDPDDYPT 789
Query: 104 -----GPRARSFRSLRRSVGVQ--AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGA 156
PR + V ++ A E T +ELT DRPGLL+ V + + ++ A
Sbjct: 790 IVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAA 849
Query: 157 EVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
++ T R+ V +IT++A G P+ DP+ +++ L+ VL
Sbjct: 850 KIATLGERVEDVFFITTKA-GEPLTDPERQQQLRERLIEVL 889
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V RIF E +S++ A++ T G + +VF++ +G P+
Sbjct: 821 LELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPL 872
>gi|291616343|ref|YP_003519085.1| GlnD [Pantoea ananatis LMG 20103]
gi|386080595|ref|YP_005994120.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
gi|291151373|gb|ADD75957.1| GlnD [Pantoea ananatis LMG 20103]
gi|354989776|gb|AER33900.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
Length = 882
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
++PLV V +G T + + PDRP LF AV D + + H I S + A
Sbjct: 685 NQPLVLVSPQATRGGTEIFIWSPDRPH-LFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRR----------------------------- 333
+ + DG+P+S + +I LE AI +R
Sbjct: 744 FIVLEPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
T LEL D+ GLL+ V +F + G+S+ A ++T G + ++F + ++ +
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDE 862
Query: 394 ETIESVRKEI 403
E +++++ +
Sbjct: 863 EMRQTLQQRL 872
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P V V + R T I + S ++ + L+ +L + A I S DG MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM-AMD 742
Query: 79 VFHVTDQNGNKLSEDDVSERIQ---------QSLGPRARSFRSLRRSVGVQAALE----H 125
F V + +G+ LS D + IQ + + PR R + + V + H
Sbjct: 743 TFIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + + +
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAN 854
>gi|424815079|ref|ZP_18240230.1| PII uridylyl-transferase [Escherichia fergusonii ECD227]
gi|325496099|gb|EGC93958.1| PII uridylyl-transferase [Escherichia fergusonii ECD227]
Length = 890
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SK LV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKSLVLLSPHATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|156975508|ref|YP_001446415.1| PII uridylyl-transferase [Vibrio harveyi ATCC BAA-1116]
gi|166232255|sp|A7N1X9.1|GLND_VIBHB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|156527102|gb|ABU72188.1| hypothetical protein VIBHAR_03239 [Vibrio harveyi ATCC BAA-1116]
Length = 874
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
SKPLV + +G T V + PD+P L V L + V+
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I E + +I HV DG P + R + ++ L K
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRL 852
Query: 392 KSETIESVRKEI 403
E +R+++
Sbjct: 853 SEEQQTELREKL 864
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM + P V + + R T + V S ++ +V L+ + + A I S D
Sbjct: 670 LLRMEDTSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSE---DDVSERIQQSL-GPRARSFRSLRRSVGVQ-------- 120
G + +D F V DQ+G + E V++ I L R ++ R +Q
Sbjct: 730 G-YVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ + T +E D PGLL++V +DL N+ A++ T R + +TSEA
Sbjct: 789 DFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
>gi|115522288|ref|YP_779199.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisA53]
gi|115516235|gb|ABJ04219.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
BisA53]
Length = 931
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL ++ +S L N+ A V T R V Y+T + G I P
Sbjct: 849 YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPT 907
Query: 185 TLAKIKRLLLYVL 197
A IKR L+++L
Sbjct: 908 RQAAIKRALIHLL 920
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N+ + + T+I+V ++ G L +L ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+++L
Sbjct: 897 DLLGAQITAPTRQAAIKRAL 916
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL +T + L++ A V T G +A +VFYV D G + + T ++
Sbjct: 852 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 911
Query: 400 RKEIGLTILRVKDDA 414
K + +L D A
Sbjct: 912 IKRALIHLLADADAA 926
>gi|229588801|ref|YP_002870920.1| PII uridylyl-transferase [Pseudomonas fluorescens SBW25]
gi|259492003|sp|C3K5E4.1|GLND_PSEFS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229360667|emb|CAY47525.1| uridylyltransferase [Pseudomonas fluorescens SBW25]
Length = 900
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A VI S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP+ + R+ + L I+RR +
Sbjct: 749 YIVLDTEGESIGDNPVRVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q ++
Sbjct: 862 DADNQPLSDPELCRRLQDAI 881
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D G + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDTEGESIGDNPVRVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP+ +++
Sbjct: 868 LSDPELCRRLQ 878
>gi|114797974|ref|YP_759248.1| PII uridylyl-transferase [Hyphomonas neptunium ATCC 15444]
gi|114738148|gb|ABI76273.1| protein-P-II uridylyltransferase [Hyphomonas neptunium ATCC 15444]
Length = 947
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 36 ATLIKVDSANKRGSLLELVQVLNDLDL-IIRRAYISSDGEWFMDVFHVTDQNGNKLSEDD 94
A + V ++ G +L L L I+ +S G +DVF + D G E D
Sbjct: 742 AVALLVSGKDRTGLFADLAGTLARLGANIVAAQVFTSKGGRIVDVFMLQDARGLPYGEGD 801
Query: 95 ------VSERIQQSLGPRARSF----RSLRRSVGV----------QAALEHTTIELTGRD 134
+ + I +LG S R+ RR + ++EH I++ RD
Sbjct: 802 GPRLAKLEQAILGALGGTVPSGSVKSRAGRREAAFLVQPSVQIHEEVSIEHMVIDVAARD 861
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
RPGLL EV VL+D+K ++ A V ++ R+ Y+
Sbjct: 862 RPGLLHEVAEVLADMKLSIHSAHVGSYGERVFDAFYV 898
>gi|152999975|ref|YP_001365656.1| PII uridylyl-transferase [Shewanella baltica OS185]
gi|151364593|gb|ABS07593.1| metal dependent phosphohydrolase [Shewanella baltica OS185]
Length = 861
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 33/200 (16%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+ +PLV V T +G T + + C DRPK LF V + D + + H I S + Y
Sbjct: 659 QDEPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALD 717
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS------------- 339
+ I DG P+S + Q + LE A+ R+ S +
Sbjct: 718 TFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQVSFLES 777
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+EL D GLL+ V IF ++ A++TT G +A + F + G +
Sbjct: 778 SRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTNDGLQL- 836
Query: 393 SETIESVRKEIGLTILRVKD 412
+ET E+ ++ ++ L K+
Sbjct: 837 NETQENTLRDALISALSAKN 856
>gi|422806611|ref|ZP_16855042.1| protein-P-II uridylyltransferase [Escherichia fergusonii B253]
gi|324112422|gb|EGC06399.1| protein-P-II uridylyltransferase [Escherichia fergusonii B253]
Length = 890
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SK LV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKSLVLLSPHATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|302554421|ref|ZP_07306763.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
gi|302472039|gb|EFL35132.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
Length = 833
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV+V ++R AT+I+V S + G L + + L D ++ +R A++S+ G +D F+V
Sbjct: 748 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYV 807
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T G L D+ V+ +++++L
Sbjct: 808 TGPEGAPLPGDEAESVARKLEETL 831
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + + V A V+T G+ AV+ FYV G P+ + ESV
Sbjct: 764 IEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYVTGPEGAPLPGDEAESV 823
Query: 400 RKEIGLTI 407
+++ T+
Sbjct: 824 ARKLEETL 831
>gi|238754810|ref|ZP_04616161.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
gi|238706970|gb|EEP99336.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
Length = 892
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
+ PLV V +G T + + PDRP L V L V+ A + A +
Sbjct: 695 TNPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTF 754
Query: 304 YIRHVDGNPISSEAERQRVI-NCLEAAIK---------RRTSEGIS-------------- 339
+ DG+P++ + R VI + LE A+ RR S +
Sbjct: 755 IVLEPDGSPLAQD--RHSVIRHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTEVNFLPTH 812
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D + +
Sbjct: 813 TERRSYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLADKDRQALSA 872
Query: 394 ETIESVRKEIG 404
E +RKE+
Sbjct: 873 E----IRKELA 879
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRRSVGVQAALE----HTT-- 127
+ +G+ L++D + ++Q++ PR R R V + HT
Sbjct: 757 LEPDGSPLAQDRHSVIRHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTEVNFLPTHTERR 816
Query: 128 --IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
+EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 817 SYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLA 863
>gi|218547622|ref|YP_002381413.1| PII uridylyl-transferase [Escherichia fergusonii ATCC 35469]
gi|226723945|sp|B7LWA6.1|GLND_ESCF3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218355163|emb|CAQ87770.1| uridylyltransferase [Escherichia fergusonii ATCC 35469]
Length = 890
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SK LV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKSLVLLSPHATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|378768474|ref|YP_005196947.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
gi|365187960|emb|CCF10910.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
Length = 882
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
++PLV V +G T + + PDRP LF AV D + + H I S + A
Sbjct: 685 NQPLVLVSPQATRGGTEIFIWSPDRPH-LFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRR----------------------------- 333
+ + DG+P+S + +I LE AI +R
Sbjct: 744 FIVLEPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
T LEL D+ GLL+ V +F + G+S+ A ++T G + ++F + ++ +
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDE 862
Query: 394 ETIESVRKEI 403
E +++++ +
Sbjct: 863 EMRQTLQQRL 872
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P V V + R T I + S ++ + L+ +L + A I S DG MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM-AMD 742
Query: 79 VFHVTDQNGNKLSEDDVSERIQ---------QSLGPRARSFRSLRRSVGVQAALE----H 125
F V + +G+ LS D + IQ + + PR R + + V + H
Sbjct: 743 TFIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + + +
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAN 854
>gi|325291780|ref|YP_004277644.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|418407873|ref|ZP_12981190.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
gi|325059633|gb|ADY63324.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|358005859|gb|EHJ98184.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
Length = 942
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N + K T+I+V+ ++ G L ++ V+ DL L I A I++ GE +D F+V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDD 94
TD G K++ D+
Sbjct: 886 TDLFGQKVTNDN 897
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V ++
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTND 896
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 41/90 (45%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V + + +TV+ + C DRP LL D + D+ ++ A + + +Y+
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ G ++++ + + L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIATRLKAVMSEQEDE 916
>gi|217974062|ref|YP_002358813.1| PII uridylyl-transferase [Shewanella baltica OS223]
gi|217499197|gb|ACK47390.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS223]
Length = 861
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 33/200 (16%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+ +PLV V T +G T + + C DRPK LF V + D + + H I S + Y
Sbjct: 659 QDEPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALD 717
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS------------- 339
+ I DG P+S + Q + LE A+ R+ S +
Sbjct: 718 TFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQVSFLES 777
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+EL D GLL+ V IF ++ A++TT G +A + F + G +
Sbjct: 778 SRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTNDGLQL- 836
Query: 393 SETIESVRKEIGLTILRVKD 412
+ET E+ ++ ++ L K+
Sbjct: 837 NETQENTLRDALISALSAKN 856
>gi|284104807|ref|ZP_06386156.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
gi|283830186|gb|EFC34444.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
Length = 911
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 16 KLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
++ +R + V +DN ++ T+I V + +K+G L E+ + L DL L + A I + +
Sbjct: 810 RMPIRRHRTEVKIDNETSDHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQ 869
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF 110
+DVF+VT++NG K+ E E IQ L + F
Sbjct: 870 VVDVFYVTERNGRKVEEARTCESIQARLQEQVDRF 904
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E I TS+ + +++ +D+ GLL ++ + + GLSV A++ TR Q V+VFYV +
Sbjct: 819 EVKIDNETSDHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDVFYVTE 878
Query: 386 ASGNPV-KSETIESVRKEIGLTILRVKDD 413
+G V ++ T ES++ + + R D
Sbjct: 879 RNGRKVEEARTCESIQARLQEQVDRFLQD 907
>gi|160874596|ref|YP_001553912.1| PII uridylyl-transferase [Shewanella baltica OS195]
gi|373948846|ref|ZP_09608807.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS183]
gi|378707848|ref|YP_005272742.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS678]
gi|386325313|ref|YP_006021430.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica BA175]
gi|160860118|gb|ABX48652.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS195]
gi|315266837|gb|ADT93690.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS678]
gi|333819458|gb|AEG12124.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica BA175]
gi|373885446|gb|EHQ14338.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS183]
Length = 861
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 33/200 (16%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+ +PLV V T +G T + + C DRPK LF V + D + + H I S + Y
Sbjct: 659 QDEPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALD 717
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS------------- 339
+ I DG P+S + Q + LE A+ R+ S +
Sbjct: 718 TFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQVSFLES 777
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+EL D GLL+ V IF ++ A++TT G +A + F + G +
Sbjct: 778 SRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTNDGLQL- 836
Query: 393 SETIESVRKEIGLTILRVKD 412
+ET E+ ++ ++ L K+
Sbjct: 837 NETQENTLRDALISALSAKN 856
>gi|386014735|ref|YP_005933012.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
gi|327392794|dbj|BAK10216.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
Length = 882
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
++PLV V +G T + + PDRP LF AV D + + H I S + A
Sbjct: 685 NQPLVLVSPQATRGGTEIFIWSPDRPH-LFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRR----------------------------- 333
+ + DG+P+S + +I LE AI +R
Sbjct: 744 FIVLEPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
T LEL D+ GLL+ V +F + G+S+ A ++T G + ++F + ++ +
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDE 862
Query: 394 ETIESVRKEI 403
E +++++ +
Sbjct: 863 EMRQTLQQRL 872
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P V V + R T I + S ++ + L+ +L + A I S DG MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM-AMD 742
Query: 79 VFHVTDQNGNKLSEDDVSERIQ---------QSLGPRARSFRSLRRSVGVQAALE----H 125
F V + +G+ LS D + IQ + + PR R + + V + H
Sbjct: 743 TFIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + + +
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAN 854
>gi|418023470|ref|ZP_12662455.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS625]
gi|353537353|gb|EHC06910.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS625]
Length = 861
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 33/200 (16%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+ +PLV V T +G T + + C DRPK LF V + D + + H I S + Y
Sbjct: 659 QDEPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALD 717
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS------------- 339
+ I DG P+S + Q + LE A+ R+ S +
Sbjct: 718 TFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQVSFLES 777
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+EL D GLL+ V IF ++ A++TT G +A + F + G +
Sbjct: 778 SRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTNDGLQL- 836
Query: 393 SETIESVRKEIGLTILRVKD 412
+ET E+ ++ ++ L K+
Sbjct: 837 NETQENTLRDALISALSAKN 856
>gi|444424960|ref|ZP_21220409.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241745|gb|ELU53265.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 874
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
SKPLV + +G T V + PD+P L V L + V+
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I E + +I HV DG P + R + ++ L K
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRL 852
Query: 392 KSETIESVRKEI 403
E +R+++
Sbjct: 853 SEEQQTELREKL 864
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM + P V + + R T + V S ++ +V L+ + + A I S D
Sbjct: 670 LLRMEDTSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSE---DDVSERIQQSL-GPRARSFRSLRRSVGVQ-------- 120
G + +D F V DQ+G + E V++ I L R ++ R +Q
Sbjct: 730 G-YVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ + T +E D PGLL++V +DL N+ A++ T R + +TSEA
Sbjct: 789 DFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
>gi|388602519|ref|ZP_10160915.1| PII uridylyl-transferase [Vibrio campbellii DS40M4]
Length = 874
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
SKPLV + +G T V + PD+P L V L + V+
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I E + +I HV DG P + R + ++ L K
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRL 852
Query: 392 KSETIESVRKEI 403
E +R+++
Sbjct: 853 SEEQQTELREKL 864
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM + P V + + R T + V S ++ +V L+ + + A I S D
Sbjct: 670 LLRMEDTSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSE---DDVSERIQQSL-GPRARSFRSLRRSVGVQ-------- 120
G + +D F V DQ+G + E V++ I L R ++ R +Q
Sbjct: 730 G-YVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ + T +E D PGLL++V +DL N+ A++ T R + +TSEA
Sbjct: 789 DFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
>gi|417858727|ref|ZP_12503784.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
gi|338824731|gb|EGP58698.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
Length = 942
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N + K T+I+V+ ++ G L ++ V+ DL L I A I++ GE +D F+V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDD 94
TD G K++ D+
Sbjct: 886 TDLFGQKVTNDN 897
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V ++
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTND 896
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 41/90 (45%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P V + + +TV+ + C DRP LL D + D+ ++ A + + +Y+
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 307 HVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ G ++++ + + L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIATRLKAVMSEQEDE 916
>gi|388543702|ref|ZP_10146992.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
gi|388278259|gb|EIK97831.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDG-----NPISSEAERQRVINCLEAA------IKRRTSEGIS------------ 339
Y + DG NP+ + R + L I+RR +
Sbjct: 749 YIVLDTDGGSIGDNPVRVKEIRDGLAEALRNPDDYPNIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DADNQPLSDPQLCSRLQDAI 881
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGGSIGDNPVRVKEIRDGLAEALRNPDDYPNIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQ 866
Query: 179 PIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 867 PLSDPQLCSRLQ 878
>gi|68250319|ref|YP_249431.1| PII uridylyl-transferase [Haemophilus influenzae 86-028NP]
gi|81170617|sp|Q4QJM6.1|GLND_HAEI8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68058518|gb|AAX88771.1| [protein-PII] uridylyltransferase [Haemophilus influenzae 86-028NP]
Length = 863
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ ++ E
Sbjct: 735 ELNGELVEFDRRRELEQALTLALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTQ 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+AGLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
>gi|385235075|ref|YP_005796417.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
gi|343463986|gb|AEM42421.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
Length = 915
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 24/199 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S + L+ + NV+ A +T A+ + +A G P + A++ RL
Sbjct: 734 DHPGLFSRMTGALALVGANVVDARTYTTKDGYATATFWVQDADGRPFE----AARLPRLR 789
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
+ R+ N V KER ++ +R + + L+T ++
Sbjct: 790 QMI------DRTMNGEVVPREAMKER--DKIKKRERAFTV------------PTLITFDN 829
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
YT++ + DRP LL D V TL + A + +A +Y++ + G
Sbjct: 830 EGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYVKDMFGLKF 889
Query: 314 SSEAERQRVINCLEAAIKR 332
+E RQ++ L AIK+
Sbjct: 890 HAEGRRQQLEAKLREAIKQ 908
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +T DN + T+I+VD+ ++ G L +LV+ L + I A I++ GE +D F+V
Sbjct: 822 PTLITFDNEGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYV 881
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K + ++++ L
Sbjct: 882 KDMFGLKFHAEGRRQQLEAKL 902
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL D+ R ++ A + T G QAV+ FYV D G +E
Sbjct: 838 IEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYVKDMFGLKFHAE 892
>gi|429212269|ref|ZP_19203434.1| PII uridylyl-transferase [Pseudomonas sp. M1]
gi|428156751|gb|EKX03299.1| PII uridylyl-transferase [Pseudomonas sp. M1]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ ++R+ ++++V + ++ G L + + D DL +R A I++ GE DVF+VT
Sbjct: 802 PLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ D+ +R+Q +L
Sbjct: 862 DAHNQPLSDPDLCKRLQAAL 881
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDV 79
P V + T+ R+ T I + +A++ V ++ L+L I+ A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G + + DD IQ+ + + + F + ++
Sbjct: 749 YIVLDADGGSIGDNPQRIAEIRQGLVDALKNPDDYPNIIQRRVPRQLKHFAFAPLVTIST 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A+ + + +E+ DRPGLL+ + + D +V A++ T R+ V Y+T +A P
Sbjct: 809 DASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVT-DAHNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
+ DPD +++ L+ L + + +S+
Sbjct: 868 LSDPDLCKRLQAALVEQLSQANGQETVPVRISI 900
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + +F + LSV A++ T G + +VFYV DA P+
Sbjct: 817 LEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTDAHNQPL 868
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 26/190 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T S YI +A G I D+P
Sbjct: 705 TQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTLDTYIVLDADGGSIGDNPQ 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+A+I++ L+ LK D ++ R+L +A
Sbjct: 765 RIAEIRQGLVDALKNPDDY------PNIIQRRVPRQLKHFAFA----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
PLVT+ + + +V+ + PDRP LL D V +A + +Y
Sbjct: 802 --PLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFY 859
Query: 305 IRHVDGNPIS 314
+ P+S
Sbjct: 860 VTDAHNQPLS 869
>gi|384247953|gb|EIE21438.1| hypothetical protein COCSUDRAFT_53990 [Coccomyxa subellipsoidea
C-169]
Length = 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +DN + AT++ ++ ++ G LL+ + L +L L IRRA I + + F++T
Sbjct: 77 PIVKIDNQHDPFATVVTIEFGDRLGQLLDTIAALKNLKLNIRRAKIKAGA--GANKFYIT 134
Query: 84 D-----------------------------QNGNKLSEDDVSERIQQS--LGPRA-RSFR 111
D ++G + + + ++ L P R
Sbjct: 135 DALTSEKILKSARLEEIRLTIFNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRDTP 194
Query: 112 SLRRSVGV--QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVV 169
++ SV V + + H+ + + RDRPGLL+++ L D+ NV+ AEV T
Sbjct: 195 KIKTSVEVSEEESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEF 254
Query: 170 YITSEATGLPIDDPDTLAKIKRLLLYVLK 198
Y+T G P+ +P + L Y L+
Sbjct: 255 YVTYH--GEPL-NPSMATLVTNALQYYLQ 280
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 22/191 (11%)
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTL 186
TIE DR G L + A L +LK N+ A++ A+ YIT T I L
Sbjct: 93 TIEFG--DRLGQLLDTIAALKNLKLNIRRAKIKAGAG--ANKFYITDALTSEKILKSARL 148
Query: 187 AKIKRLLLY--VLKGDRDKRSA-NTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
+I RL ++ +LK + +A S + LH + D +
Sbjct: 149 EEI-RLTIFNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRD-------------TP 194
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ K V V ++ V++R DRP LL D V TL D+ V A V E P A E+
Sbjct: 195 KIKTSVEVSEEESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEF 254
Query: 304 YIRHVDGNPIS 314
Y+ + G P++
Sbjct: 255 YVTY-HGEPLN 264
>gi|407772641|ref|ZP_11119943.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
gi|407284594|gb|EKF10110.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
Length = 913
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 23/216 (10%)
Query: 117 VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEAT 176
V + ++ T I + D PGL S++ ++ NV+ A++ T MA + +
Sbjct: 718 VRIDTEIDATEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMALDTFFVQDTN 777
Query: 177 GLPIDDPDTLAKIKRLLLYVLKGD-RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNY 235
G +D L +++ L V+ G R + + D+ H+
Sbjct: 778 GEAFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHR------------------ 819
Query: 236 AESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE 295
+A + +P V +++ + +TV+ + DR LL+D L D+ + A +
Sbjct: 820 ----TAVFKVEPNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTF 875
Query: 296 SPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIK 331
A +Y++ V G I S + +V L AI+
Sbjct: 876 GERAVDVFYVKDVFGLKIDSRTKFVQVKETLTQAIR 911
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLL D+TR R+ + + A ++T G +AV+VFYV D G + S T
Sbjct: 842 IEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKDVFGLKIDSRT 897
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 77 MDVFHVTDQNGNKLSE----DDVSERIQQSLGPRARSFRSLRRS---------------- 116
+D F V D NG ++ D + + +++ + + R + + R
Sbjct: 768 LDTFFVQDTNGEAFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEP 827
Query: 117 ---VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
+ +A+ HT IE+T RDR GLL ++ L DL + A + T R V Y+
Sbjct: 828 NVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYV-K 886
Query: 174 EATGLPIDDPDTLAKIKRLLLYVLKGD 200
+ GL ID ++K L ++ D
Sbjct: 887 DVFGLKIDSRTKFVQVKETLTQAIRND 913
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +DN ++R T+I++ + ++ G L ++ + L DL + I A IS+ GE +DVF+V
Sbjct: 827 PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVK 886
Query: 84 DQNGNKL 90
D G K+
Sbjct: 887 DVFGLKI 893
>gi|170749943|ref|YP_001756203.1| PII uridylyl-transferase [Methylobacterium radiotolerans JCM 2831]
gi|170656465|gb|ACB25520.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium radiotolerans
JCM 2831]
Length = 935
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V +DN + + T++++ ++ G L EL + L L I A++++ GE +DVF+V
Sbjct: 827 PPDVIIDNALSSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYV 886
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G ++++ D I+ ++
Sbjct: 887 TDLTGTRVTQPDRQAAIRAAV 907
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+TG DRPGLL E+ S L N+ A V T R V Y+T + TG + PD
Sbjct: 841 TVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVT-DLTGTRVTQPDR 899
Query: 186 LAKIKRLLLYVLKGD 200
A I+ ++ V D
Sbjct: 900 QAAIRAAVMDVFAHD 914
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+E+ DR GLL ++T F L++T A V T G +AV+VFYV D +G V
Sbjct: 843 VEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTDLTGTRV 894
>gi|408376881|ref|ZP_11174484.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
gi|407748840|gb|EKF60353.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
Length = 941
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V + N + K T+I+V+ ++ G L E+ VL+DL L I A I++ GE +D F+VT
Sbjct: 827 PDVRISNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVT 886
Query: 84 DQNGNKLSEDDVSERIQQSLGP 105
D G K++ ++ I L P
Sbjct: 887 DLVGQKVTNENRQVNIANRLKP 908
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+++T + + L + A +TT G + ++ FYV D G V +E
Sbjct: 842 IEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVTDLVGQKVTNE 896
>gi|417142937|ref|ZP_11985318.1| protein-P-II uridylyltransferase [Escherichia coli 97.0259]
gi|417306695|ref|ZP_12093583.1| [Protein-PII] uridylyltransferase [Escherichia coli PCN033]
gi|432872709|ref|ZP_20092525.1| [protein-PII] uridylyltransferase [Escherichia coli KTE147]
gi|338771740|gb|EGP26472.1| [Protein-PII] uridylyltransferase [Escherichia coli PCN033]
gi|386154962|gb|EIH11320.1| protein-P-II uridylyltransferase [Escherichia coli 97.0259]
gi|431406054|gb|ELG89286.1| [protein-PII] uridylyltransferase [Escherichia coli KTE147]
Length = 890
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AV D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVSAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
>gi|224284356|gb|ACN39913.1| unknown [Picea sitchensis]
Length = 306
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+V +D S+ AT+++V ++ G+LL+ ++ L DL L + +A + D + F +T
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
+ G K+ + + E+I+ ++ P + + ++ + G+ E ++++ R
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEKPDVDISTRIH 219
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWT 160
DRPGLL E+ LSD+ V E T
Sbjct: 220 IYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDT 262
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+T DR G L + L DL NV+ A V+ +S + IT TG +DDP+
Sbjct: 113 TVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVS-----VDSTHK-----ERRLHQMMYADRDYDMNY 235
L +I+ ++ L + SA A+ V K R+H +Y D
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEKPDVDISTRIH--IYDD------- 223
Query: 236 AESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE 295
G ++ L+++E+ DRP LL + V TL+D+ V E
Sbjct: 224 -------GPNRSLLSIETA-------------DRPGLLVEIVKTLSDISVAVESGEFDTE 263
Query: 296 SPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
A ++++ + I + +Q V N L ++R T+E
Sbjct: 264 GLLAKAKFHVSYRGSALI--KPLQQVVANSLRYFLRRPTTE 302
>gi|145631865|ref|ZP_01787623.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
gi|144982521|gb|EDJ90079.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
Length = 863
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ ++ E
Sbjct: 735 ELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+AGLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
>gi|398873974|ref|ZP_10629217.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
gi|398197674|gb|EJM84649.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
Length = 900
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R+ T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A + T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|119477100|ref|ZP_01617336.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
gi|119449463|gb|EAW30701.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
Length = 896
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Query: 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHVTDQNGNKLSED- 93
AT I + + K L L+L I+ A I S G F +D F V D NG + D
Sbjct: 709 ATQIFIHTQQKDSLFAIAASALEQLNLSIQDARIYSSGSGFTLDTFFVLDSNGEPIGNDP 768
Query: 94 -----------------DVSERIQQSLGPRARSFRSL--RRSVGVQAALEHTTIELTGRD 134
D S I Q PR S+ R ++ A H+ +E+ D
Sbjct: 769 ERIDEIQSVLMEHLINTDSSLDIMQCRTPRQMRLFSVPTRTTLFTDVAGGHSVLEVLTPD 828
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
RPGLL+ + + D ++ A++ T + V +IT + PI+DP
Sbjct: 829 RPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFIT-DNNHQPINDP 876
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETI-ES 398
LE+ DR GLL+ + +IF + + + A++ T G +VF++ D + P+ + ES
Sbjct: 822 LEVLTPDRPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNHQPINDPALCES 881
Query: 399 VRKEI 403
++ I
Sbjct: 882 IQNAI 886
>gi|378949067|ref|YP_005206555.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
gi|359759081|gb|AEV61160.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
Length = 900
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R+ T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q+++
Sbjct: 862 DAHNQPLSDPQLCSRLQEAI 881
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE---------DDVSERIQ---------QSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + + D ++E ++ Q PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
+ DP ++++ ++ L +++ + T +S+
Sbjct: 868 LSDPQLCSRLQEAIVRHLSVNQEPDAHMTRISI 900
>gi|392955012|ref|ZP_10320563.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
gi|391857669|gb|EIT68200.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
Length = 894
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEYY 304
PL+ V +G TV + PDR L + L + + A I + + + Y
Sbjct: 697 PLILVSMLDGRGTTVF-VYTPDRDHLFGLSTGVLARLGLNILDAR-INTTADGFTLDSYV 754
Query: 305 IRHVDGNPISSEAERQRVINCLEAA----------IKRRTSEGIS--------------- 339
+ DG+ IS + + + L + RRTS+ +
Sbjct: 755 VMEGDGSAISQGHRFEEIRDSLHRVLADPNISVVDVNRRTSQKLKHFDTPTDVSFSLDKV 814
Query: 340 -----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLLS + RIF++ GL + A++ T G +A +VF++ DA P+
Sbjct: 815 RNRTILELVTADRPGLLSMIGRIFQKRGLLLDAAKIGTIGERAEDVFFITDADHKPI 871
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 56 VLNDLDLIIRRAYISSDGEWF-MDVFHVTDQNGNKLSEDDVSERIQQSLG-----PRA-- 107
VL L L I A I++ + F +D + V + +G+ +S+ E I+ SL P
Sbjct: 728 VLARLGLNILDARINTTADGFTLDSYVVMEGDGSAISQGHRFEEIRDSLHRVLADPNISV 787
Query: 108 -----RSFRSLRR-------SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R+ + L+ S + T +EL DRPGLLS + + +
Sbjct: 788 VDVNRRTSQKLKHFDTPTDVSFSLDKVRNRTILELVTADRPGLLSMIGRIFQKRGLLLDA 847
Query: 156 AEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
A++ T R V +IT +A PI DP L +++ +L+ L
Sbjct: 848 AKIGTIGERAEDVFFIT-DADHKPISDPSQLDELREVLVRTL 888
>gi|330807779|ref|YP_004352241.1| phosphohydrolase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695565|ref|ZP_17670055.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|327375887|gb|AEA67237.1| putative Phosphohydrolase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009553|gb|EIK70804.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 900
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R+ T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q+++
Sbjct: 862 DAHNQPLSDPQLCSRLQEAI 881
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE---------DDVSERIQ---------QSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + + D ++E ++ Q PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQP 867
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
+ DP ++++ ++ L +++ + T +S+
Sbjct: 868 LSDPQLCSRLQEAIVQHLSVNQEPDAHMTRISI 900
>gi|220917353|ref|YP_002492657.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955207|gb|ACL65591.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter dehalogenans
2CP-1]
Length = 930
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 114 RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
RR +G+ T + LT RDRPGLL+ V VL+ + ++ AEV++ + A+ ++
Sbjct: 730 RRDLGL------TELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAG 783
Query: 174 EATGL-----PIDDPDTLAK---IKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMM 225
A + P D P A+ +R L+ VL G+ + T RRL
Sbjct: 784 RALDVFELRGPDDGPVEPARWRAARRDLVRVLAGEEPLAALMT----------RRLR--- 830
Query: 226 YADRDYDMNYAESGSASGRSKPL------VTVESCTDKGYTVVNLRCPDRPKLLFDAVCT 279
++S +KPL + +++ + + ++VV++ DR LL T
Sbjct: 831 --------------ASSVAAKPLPRVPTKIVIDNHSARAHSVVDVFTADRVGLLHTVART 876
Query: 280 LTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSE 316
++ V A + E A +Y+R DG P+ E
Sbjct: 877 FFELGVSVDLARIATEGHRAADAFYVRTSDGRPLEGE 913
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 70/182 (38%), Gaps = 43/182 (23%)
Query: 256 DKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE----------AYQEYYI 305
D G T + L DRP LL L + + HA V + SP+ A + +
Sbjct: 732 DLGLTELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFEL 791
Query: 306 RHVDGNPISS---EAERQRVINCLE-----AAIKRRTSEGISL----------------- 340
R D P+ A R+ ++ L AA+ R S+
Sbjct: 792 RGPDDGPVEPARWRAARRDLVRVLAGEEPLAALMTRRLRASSVAAKPLPRVPTKIVIDNH 851
Query: 341 --------ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
++ DR GLL V R F E G+SV A + T G +A + FYV + G P++
Sbjct: 852 SARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATEGHRAADAFYVRTSDGRPLE 911
Query: 393 SE 394
E
Sbjct: 912 GE 913
>gi|347734806|ref|ZP_08867795.1| PII uridylyltransferase [Azospirillum amazonense Y2]
gi|346922124|gb|EGY02613.1| PII uridylyltransferase [Azospirillum amazonense Y2]
Length = 950
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDN ++ T+I+V+ ++ G L +L + L L+L I A IS+ G +DVF+V
Sbjct: 841 PPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYV 900
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++ + +I++ L
Sbjct: 901 KDIFGLKVAHEAKLTQIRKEL 921
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 330 IKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+ + S G + +E+ DR GLL D+TR L + A+++T G+ AV+VFYV D G
Sbjct: 846 VDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYVKDIFG 905
Query: 389 NPVKSET-IESVRKEIGLTILRVKDDAYSK---SPP 420
V E + +RKE+ L +L D A + PP
Sbjct: 906 LKVAHEAKLTQIRKEL-LAVLDEPDPAAEQPKAKPP 940
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 103 LGPRARSFRSLRRS-VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTH 161
L R R FR R V +A+ +T IE+ GRDRPGLL ++ L+ L + A++ T+
Sbjct: 831 LPSRTRVFRVPPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTY 890
Query: 162 NSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
+ V Y+ + GL + L +I++ LL VL
Sbjct: 891 GNAAVDVFYV-KDIFGLKVAHEAKLTQIRKELLAVL 925
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
R P V V++ GYTV+ + DRP LL+D LT + + A + A +
Sbjct: 839 RVPPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVF 898
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAI 330
Y++ + G ++ EA+ ++ L A +
Sbjct: 899 YVKDIFGLKVAHEAKLTQIRKELLAVL 925
>gi|149185003|ref|ZP_01863320.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
gi|148831114|gb|EDL49548.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
Length = 919
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV DN ++ + T+I+V++ ++ L L +VL + L++ A+I+ GE +D F+VT
Sbjct: 825 PRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVT 884
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G KL+ + +R++ L
Sbjct: 885 DLTGGKLAGGERQDRLEARL 904
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 34 RKATLIKVDSANKRGSLLELVQVLN--DLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLS 91
R ATL+ V +++ G + ++ ++I R + S G W +D F V D +G
Sbjct: 724 RGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTG-WALDNFLVQDPHGAPFR 782
Query: 92 EDDVSERIQQSLG------------------PRARSFR---SLRRSVGVQAALEHTTIEL 130
E+ ER+++S+ P +RS S R +A+ T IE+
Sbjct: 783 EEQQLERLKKSIADALANRIDLTPKLAQRPLPHSRSKAFDVSPRVLFDNKASNRFTVIEV 842
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
RDRP LL+ + VL + + V A + + R Y+T G
Sbjct: 843 NARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTDLTGG 889
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+E+ DR LL+ + R+ E+ L V A +T G +AV+ FYV D +G +
Sbjct: 840 IEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTDLTGGKL 891
>gi|399003066|ref|ZP_10705737.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
gi|398123470|gb|EJM13019.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
Length = 900
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + DG+ I R + I + I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE---------DDVSERIQ---------QSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + + D ++E ++ Q PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQP 867
Query: 180 IDDP 183
+ DP
Sbjct: 868 LSDP 871
>gi|330993434|ref|ZP_08317369.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759464|gb|EGG75973.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 911
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 48 GSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRA 107
G+ E Q L L L+I +A +D+ Q G +LS G R
Sbjct: 760 GAAFEEPQQLGRLSLLIEQALTGH-----IDINREIAQCGRRLS------------GRRM 802
Query: 108 RSFRSLRRSV-GVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
R+ R V +A+ T +E+ GRDRPGLL ++ A LS+ K + A + T+ R
Sbjct: 803 RAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAV 862
Query: 167 SVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198
V Y+ + GL I D + L +I+ LL L+
Sbjct: 863 DVFYV-KDLFGLKITDRERLDRIRTTLLAGLQ 893
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+++++ ++ G L ++ L++ L I A+I++ G +DVF+V
Sbjct: 808 PPRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYV 867
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+++ + +RI+ +L
Sbjct: 868 KDLFGLKITDRERLDRIRTTL 888
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 30/219 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S++ ++ +++ A + T + MA +A G ++P
Sbjct: 709 TEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAAFEEPQQ 768
Query: 186 LAKIKRLLLYVLKGDRD-KRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
L ++ L+ L G D R S + R +H
Sbjct: 769 LGRLSLLIEQALTGHIDINREIAQCGRRLSGRRMRAIH---------------------- 806
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P V +++ TVV + DRP LL D L++ + + A + A +Y
Sbjct: 807 VPPRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFY 866
Query: 305 IRHVDGNPISSEAERQRVINCL-------EAAIKRRTSE 336
++ + G I+ R+ L EAA +RR+SE
Sbjct: 867 VKDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSSE 905
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+E+ DR GLL D+T E L + A +TT G +AV+VFYV D G
Sbjct: 824 VEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 872
>gi|152965363|ref|YP_001361147.1| PII uridylyl-transferase [Kineococcus radiotolerans SRS30216]
gi|151359880|gb|ABS02883.1| metal dependent phosphohydrolase [Kineococcus radiotolerans
SRS30216]
Length = 778
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 258 GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEA 317
G+ VV + PDR + D L +++V A V A +++ G P S+
Sbjct: 593 GFFVVTVVTPDRTGVFADLAGLLAGHRFLVRSALVRTLDGVAVDSWWVESPSGEPPSAVL 652
Query: 318 ERQ---RVINCLEAAIKR---------RTSEGIS--------------------LELCCE 345
RQ R++ A ++R R + G+ LE+
Sbjct: 653 LRQGLERIVGGDVALLERLAARDAQTPRPAGGVRSLVAHPRIVILPGASERATVLEVRAA 712
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
DR GLL + R E G+ + A V T +QAV+V Y+ +ASG
Sbjct: 713 DRPGLLHALGRALAEEGIDIRSAHVATYAAQAVDVLYLAEASGE 756
>gi|398917470|ref|ZP_10658173.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
gi|398172864|gb|EJM60716.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + DG+ I R + I + I+RR +
Sbjct: 749 YIVLDADGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE---------DDVSERIQ---------QSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + + D ++E ++ Q PR + V +
Sbjct: 749 YIVLDADGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQP 867
Query: 180 IDDP 183
+ DP
Sbjct: 868 LSDP 871
>gi|260582819|ref|ZP_05850605.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
gi|260094145|gb|EEW78047.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
Length = 863
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ ++ E
Sbjct: 735 ELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQTDVRFLQENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+AGLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
>gi|398858407|ref|ZP_10614097.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
gi|398239133|gb|EJN24848.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + DG+ I R + I + I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSED------------------DVSERIQQSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + ++ D I Q PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQP 867
Query: 180 IDDP 183
+ DP
Sbjct: 868 LSDP 871
>gi|398843542|ref|ZP_10600681.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
gi|398102080|gb|EJL92269.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + DG+ I R + I + I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSED------------------DVSERIQQSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + ++ D I Q PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQP 867
Query: 180 IDDP 183
+ DP
Sbjct: 868 LSDP 871
>gi|409426404|ref|ZP_11260959.1| PII uridylyl-transferase [Pseudomonas sp. HYS]
Length = 899
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 35/199 (17%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A +I S + +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP+ + R + + L I+RR +
Sbjct: 748 YIVLDNDGDSIGDNPVRVKQIRDGLTDALRNPDDYPTIIQRRVPRQLKHFTFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 808 DAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNLPL 867
Query: 392 KSETIESVRKEIGLTILRV 410
+ S ++ + LRV
Sbjct: 868 SDPQLCSRLQDAIVEQLRV 886
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 27/203 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 748 YIVLDNDGDSIGDNPVRVKQIRDGLTDALRNPDDYPTIIQRRV-PRQLKHFTFAPQVTIH 806
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A L
Sbjct: 807 NDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNL 865
Query: 179 PIDDPDTLAKIKRLLLYVLKGDR 201
P+ DP ++++ ++ L+ D+
Sbjct: 866 PLSDPQLCSRLQDAIVEQLRVDQ 888
>gi|407787724|ref|ZP_11134863.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
gi|407199003|gb|EKE69027.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
Length = 940
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLL D+TR+ N +S+ A++ T G+Q V+VFYV D G SE+
Sbjct: 862 IEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFGMKFHSES 917
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P ++ DN + T+I+VD+ ++ G L +L +VL ++ I A I++ G +DVF+V
Sbjct: 846 PTSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYV 905
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K + +++ L
Sbjct: 906 KDMFGMKFHSESKRRTLEKKL 926
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 82/197 (41%), Gaps = 24/197 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D G+ S + L+ + NV+ A +T A+ V+ + G P + L ++++++
Sbjct: 758 DHHGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWIQDNDGNPFEQA-RLPRLRQMI 816
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
+L+G+ R A +DS K ++ + R ++ ++
Sbjct: 817 DKILRGEMGARQA-----LDSRDKIKK------------------RESKFRVPTSISFDN 853
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ +T++ + DRP LL+D L + A + + +Y++ + G
Sbjct: 854 EGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFGMKF 913
Query: 314 SSEAERQRVINCLEAAI 330
SE++R+ + L AI
Sbjct: 914 HSESKRRTLEKKLREAI 930
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 39/135 (28%)
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF--RSLRRSVGVQAAL 123
R Y S DG + VF + D +GN +Q+ PR R + LR +G + AL
Sbjct: 781 RTYTSKDG-YATAVFWIQDNDGNPF---------EQARLPRLRQMIDKILRGEMGARQAL 830
Query: 124 E---------------------------HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGA 156
+ T IE+ RDRPGLL ++ VL+ ++ A
Sbjct: 831 DSRDKIKKRESKFRVPTSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATA 890
Query: 157 EVWTHNSRMASVVYI 171
++ T+ +++ V Y+
Sbjct: 891 QIATYGAQVVDVFYV 905
>gi|377578714|ref|ZP_09807690.1| protein-PII uridylyltransferase [Escherichia hermannii NBRC 105704]
gi|377540027|dbj|GAB52855.1| protein-PII uridylyltransferase [Escherichia hermannii NBRC 105704]
Length = 891
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 35/174 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 694 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 752
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DG P++ +R I LE AI +RT
Sbjct: 753 FIVLEPDGKPLAP--DRHEAIRFGLEQAITQRTWHPPQPRRQPAKLRPFTVETEVNFLPT 810
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
+EL D+ GLL+ V ++F + G+S+ A ++T G + ++F + +A
Sbjct: 811 HTDRKSFMELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIANA 864
>gi|359394094|ref|ZP_09187147.1| uridylyltransferase [Halomonas boliviensis LC1]
gi|357971341|gb|EHJ93786.1| uridylyltransferase [Halomonas boliviensis LC1]
Length = 891
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 57 LNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL------------ 103
+ L L I A I +S +W ++ F V D +G + + E ++Q L
Sbjct: 730 MEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPGHIEEMRQHLVEELDDPDDYPD 789
Query: 104 -----GPRARSFRSLRRSVGVQ--AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGA 156
PR + V ++ A E T +ELT DRPGLL+ V + + ++ A
Sbjct: 790 IVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAA 849
Query: 157 EVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
++ T R+ V +IT++A G P+ DP+ +++ L+ VL
Sbjct: 850 KIATLGERVEDVFFITTKA-GEPLTDPERQQQLRERLIEVL 889
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V RIF E +S++ A++ T G + +VF++ +G P+
Sbjct: 821 LELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPL 872
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 104 GPRARSFR-SLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
G R R F + ++ Q + HT IE++G DRPGLL ++ +S L N+ A V T
Sbjct: 825 GKRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFG 884
Query: 163 SRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
R V Y+T + G I P IKR L+++L
Sbjct: 885 ERARDVFYVT-DLLGARITAPTRQTAIKRALVHLL 918
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 20 RMNP----PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
R+ P P+VT++N + + T+I+V ++ G L +L ++ L+L I A++++ GE
Sbjct: 827 RLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 886
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSL 103
DVF+VTD G +++ I+++L
Sbjct: 887 ARDVFYVTDLLGARITAPTRQTAIKRAL 914
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 290 ATVIAESPEAYQEYYIRHVDGNPISSEAERQR--VINCLEAAIKRRTSEGISLELCCEDR 347
AT IAE E E +R D P + +R R V+ + + +E+ DR
Sbjct: 798 ATRIAEIIEQVLEGRLRLPDVVPSRAGGKRLRPFVVEPKVTINNQWSDRHTMIEVSGLDR 857
Query: 348 AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRK 401
GLL +T + L++ A V T G +A +VFYV D G + + T ++ K
Sbjct: 858 PGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQTAIK 911
>gi|426407999|ref|YP_007028098.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
gi|426266216|gb|AFY18293.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + DG+ I R + I + I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R+ T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DAHNQPLSDPLLCSRLQDAI 881
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE---------DDVSERIQ---------QSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + + D ++E ++ Q PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQP 867
Query: 180 IDDP 183
+ DP
Sbjct: 868 LSDP 871
>gi|407366174|ref|ZP_11112706.1| PII uridylyl-transferase [Pseudomonas mandelii JR-1]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCTRLQDAI 881
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|365895650|ref|ZP_09433753.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
gi|365423576|emb|CCE06295.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
Length = 930
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DRPGLL E+ +S L N+ A V T R V Y+T + G I P
Sbjct: 848 YTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVT-DLLGAQISAPT 906
Query: 185 TLAKIKRLLLYVL 197
A IK LL++L
Sbjct: 907 RQAAIKSTLLHLL 919
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 836 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVT 895
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G ++S I+ +L
Sbjct: 896 DLLGAQISAPTRQAAIKSTL 915
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL ++T + L++T A V T G +A +VFYV D G + + T ++
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTDLLGAQISAPTRQAA 910
Query: 400 RKEIGLTIL 408
K L +L
Sbjct: 911 IKSTLLHLL 919
>gi|350532167|ref|ZP_08911108.1| PII uridylyl-transferase [Vibrio rotiferianus DAT722]
Length = 874
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
SKPLV + +G T V + PD+P L V L + V+
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I E + +I HV DG P + R + ++ L K
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSETGGRL 852
Query: 392 KSETIESVRKEI 403
E +R ++
Sbjct: 853 SEEQQAELRDKL 864
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM + P V + + R T + V S ++ +V L+ + + A I S D
Sbjct: 670 LLRMEDTSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSE---DDVSERIQQSL-GPRARSFRSLRRSVGVQ-------- 120
G + +D F V DQ+G + E V++ I L R ++ R +Q
Sbjct: 730 G-YVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ + T +E D PGLL++V +DL N+ A++ T R + +TSE
Sbjct: 789 DFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSET 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
>gi|398957202|ref|ZP_10677152.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
gi|398148649|gb|EJM37319.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + DG+ I R + I + I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DAHNQPLSDPLLCSRLQDAI 881
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE---------DDVSERIQ---------QSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + + D ++E ++ Q PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQP 867
Query: 180 IDDP 183
+ DP
Sbjct: 868 LSDP 871
>gi|398795140|ref|ZP_10555055.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
gi|398206971|gb|EJM93727.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
Length = 884
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 33/173 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + PDRP L F AV D + + H I S + A
Sbjct: 687 NKPLVLVSPQATRGGTEIFIWSPDRPHL-FAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS-------------- 339
+ + DG+P++++ +I LE AI RR S +
Sbjct: 746 FIVLEPDGSPLAAD-RHPLIIQALEQAITQNEWVPPRTRRQSARLKHFSVDTEVNFLPTH 804
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
LEL D+ GLL+ V +F + G+S+ A ++T G + ++F + D+
Sbjct: 805 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILADS 857
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P V V + R T I + S ++ + L+ +L + A I S DG MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM-AMD 744
Query: 79 VFHVTDQNGNKLSEDD---VSERIQQSLG------PRAR--SFRSLRRSVGVQAAL--EH 125
F V + +G+ L+ D + + ++Q++ PR R S R SV + H
Sbjct: 745 TFIVLEPDGSPLAADRHPLIIQALEQAITQNEWVPPRTRRQSARLKHFSVDTEVNFLPTH 804
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT-SEATGLPI 180
T +EL D+PGLL+ V V +DL ++ GA + T R+ + + SE L +
Sbjct: 805 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILADSERRALGV 864
Query: 181 DDPDTLAK 188
+ + L +
Sbjct: 865 EMRNVLQQ 872
>gi|336176218|ref|YP_004581593.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
gi|334857198|gb|AEH07672.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
Length = 765
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 79/206 (38%), Gaps = 34/206 (16%)
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
I + DRPGLL+ VL+ + +V A N R + S G P +
Sbjct: 590 IVVVAPDRPGLLAATTGVLAVNRLDVHRASARGENGRALLQAAVASTHDGGP-----SAG 644
Query: 188 KIKRLLLYVLKG--DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
K++ LL VL G D D R A + YA +A R
Sbjct: 645 KLRGDLLRVLAGRVDLDARIAG--------------REQAYA------------AARRRL 678
Query: 246 KPLVTVESCTDKGY-TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P D G TVV +R PDR +LF V LTD V A V + +Y
Sbjct: 679 PPAPPKIIFDDSGSDTVVEIRTPDRAGVLFRMVRALTDAGLGVRTAIVATIGLDVVNAFY 738
Query: 305 IRHVDGNPISSEAERQRVINCLEAAI 330
+R DG+ + R+ V N + AA+
Sbjct: 739 VREADGSTVGRPGRREEVANRVLAAL 764
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 63/171 (36%), Gaps = 28/171 (16%)
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V V D + + PDRP LL L + V+ A+ E+ A + +
Sbjct: 577 VAVNPLPDDSMFEIVVVAPDRPGLLAATTGVLAVNRLDVHRASARGENGRALLQAAVAST 636
Query: 309 -DGNPISSE---------------------------AERQRVINCLEAAIKRRTSEGISL 340
DG P + + A R+R+ I + +
Sbjct: 637 HDGGPSAGKLRGDLLRVLAGRVDLDARIAGREQAYAAARRRLPPAPPKIIFDDSGSDTVV 696
Query: 341 ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
E+ DRAG+L + R + GL V A V T G VN FYV +A G+ V
Sbjct: 697 EIRTPDRAGVLFRMVRALTDAGLGVRTAIVATIGLDVVNAFYVREADGSTV 747
>gi|398907733|ref|ZP_10654028.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
gi|398171049|gb|EJM58964.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|77457326|ref|YP_346831.1| PII uridylyl-transferase [Pseudomonas fluorescens Pf0-1]
gi|398976829|ref|ZP_10686639.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
gi|91206750|sp|Q3KHB4.1|GLND_PSEPF RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77381329|gb|ABA72842.1| uridylyltransferase [Pseudomonas fluorescens Pf0-1]
gi|398138712|gb|EJM27726.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDG-----NPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG NP+ + R + L I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D +G+ + ++ V R++Q + R+ ++R V Q L+H
Sbjct: 749 YIVLDTDGDSIGDNPV--RVKQIRDGLTEALRNPADYPTIIQRRVPRQ--LKHFAFAPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +ELT DRPGLL+ V + + ++ A++ T R+ V +IT +A
Sbjct: 805 TIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 863
Query: 176 TGLPIDDP 183
P+ DP
Sbjct: 864 HNQPLSDP 871
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DAHNQPLSDPLLCSRLQDAI 881
>gi|398801948|ref|ZP_10561179.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
gi|398090630|gb|EJL81097.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
Length = 884
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 33/173 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + PDRP L F AV D + + H I S + A
Sbjct: 687 NKPLVLVSPQATRGGTEIFIWSPDRPHL-FAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS-------------- 339
+ + DG+P++++ +I LE AI RR S +
Sbjct: 746 FIVLEPDGSPLAAD-RHPLIIQALEQAITQTEWVPPRTRRQSARLKHFSVDTEVNFLPTH 804
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
LEL D+ GLL+ V +F + G+S+ A ++T G + ++F + D+
Sbjct: 805 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILADS 857
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+N P V V + R T I + S ++ + L+ +L + A I S DG MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM-AMD 744
Query: 79 VFHVTDQNGNKLSEDD---VSERIQQSLG------PRAR--SFRSLRRSVGVQAAL--EH 125
F V + +G+ L+ D + + ++Q++ PR R S R SV + H
Sbjct: 745 TFIVLEPDGSPLAADRHPLIIQALEQAITQTEWVPPRTRRQSARLKHFSVDTEVNFLPTH 804
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT-SEATGLPI 180
T +EL D+PGLL+ V V +DL ++ GA + T R+ + + SE L +
Sbjct: 805 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILADSERRALGV 864
Query: 181 DDPDTLAK 188
+ D L +
Sbjct: 865 EMRDVLQQ 872
>gi|398936503|ref|ZP_10667004.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
gi|398167815|gb|EJM55852.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|398877479|ref|ZP_10632624.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
gi|398202374|gb|EJM89220.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
Length = 900
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 862 DANNQPLSDPLLCSRLQDAI 881
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|255074903|ref|XP_002501126.1| predicted protein [Micromonas sp. RCC299]
gi|226516389|gb|ACO62384.1| predicted protein [Micromonas sp. RCC299]
Length = 246
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 37/189 (19%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +DN S+ AT++ V ++ G LL+ V+ L L L + RA ++ G+ + F+VT
Sbjct: 34 PVVLIDNRSDPLATVVSVQFSDVLGQLLDTVESLKALGLNVSRAEVT--GDENPNKFYVT 91
Query: 84 DQ-NGNKLSEDDVSERIQQS---------------------------------LGPRARS 109
D K+ + + E I+ + LG R R
Sbjct: 92 DAATSEKVVKSEQIENIRMAIINNMLYYHPESKQYFEGGTVDMPGNRDVDANPLGARPRG 151
Query: 110 FRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVV 169
+ + ++ A I T DRPGLL ++ L DL NV+ AE+ T + + V
Sbjct: 152 KVATKVTIEAMGAARSRLIVETA-DRPGLLVDIVRTLKDLSLNVVSAEIDTIGPKASDTV 210
Query: 170 YITSEATGL 178
Y+T L
Sbjct: 211 YLTYRGAAL 219
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA--SGNPVKSETIESVRKEI 403
D G L D + GL+V+RAEVT G + N FYV DA S VKSE IE++R I
Sbjct: 55 DVLGQLLDTVESLKALGLNVSRAEVT--GDENPNKFYVTDAATSEKVVKSEQIENIRMAI 112
>gi|301058658|ref|ZP_07199659.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447222|gb|EFK10986.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 878
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 330 IKRRTSEGISL-ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+ R S+ +L E+ ++R GLL D+TR E GL + A++ T+ Q +VFYV D G
Sbjct: 797 VNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFYVRDLEG 856
Query: 389 NPVKSE-----TIESVRKEIG 404
V+ E +E++ K++G
Sbjct: 857 QKVEDEKETARIVETLNKKLG 877
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 51/85 (60%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFH 81
+ P++ V+N ++ TLI+V + N+ G L ++ + L +L L IR A I++ + DVF+
Sbjct: 791 HAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFY 850
Query: 82 VTDQNGNKLSEDDVSERIQQSLGPR 106
V D G K+ ++ + RI ++L +
Sbjct: 851 VRDLEGQKVEDEKETARIVETLNKK 875
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 24/200 (12%)
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTH-NSRMASVVYITSEATGLPIDDPDTL 186
I +DRPG+ S + VL+ + NV+ A ++T + + + T A D L
Sbjct: 696 ITFMSKDRPGIFSRMAGVLAINRINVVAANIYTWGDGTVVDIFKATPHA-----DRHHAL 750
Query: 187 AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
K+ V K D N +S++ KE+ ++ D +Y ++A
Sbjct: 751 EVWKK----VQKDAEDVFRGN--LSLEDRLKEKAKPSIL--DSEYKPSHA---------- 792
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
P + V + +T++ + +R LL+D TL ++ + A + ++ + +Y+R
Sbjct: 793 PKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFYVR 852
Query: 307 HVDGNPISSEAERQRVINCL 326
++G + E E R++ L
Sbjct: 853 DLEGQKVEDEKETARIVETL 872
>gi|192362270|ref|YP_001981600.1| PII uridylyl-transferase [Cellvibrio japonicus Ueda107]
gi|190688435|gb|ACE86113.1| protein-P-II uridylyltransferase [Cellvibrio japonicus Ueda107]
Length = 905
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 22 NPPRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFM 77
+ P V + T+N++ AT I V S +++ + + L L+L I+ A I SS+ +
Sbjct: 700 DQPLVLIKKTANKELAGATQIFVYSKDQKNVFVAVATALAQLNLSIQDAKIYSSNSGHTI 759
Query: 78 DVFHVTDQNGNKLSED-DVSERIQQSL-----------------GPRARSFRS--LRRSV 117
D F V +++G L + + ++IQQ+L PR + + R S+
Sbjct: 760 DTFFVLNEDGEPLGNNPTLLKKIQQTLIDELGLVDNYRDVIGRRTPRRLKYFASPTRTSL 819
Query: 118 GVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
+ +E+ DRPGLL+ + + D ++ A++ T R+ + +I ++ G
Sbjct: 820 NTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFFIV-DSQG 878
Query: 178 LPIDDPDTLAKIKR 191
P+ DP K+++
Sbjct: 879 KPLGDPVLCEKLQQ 892
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 240 SASGRSKPLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-E 295
+A +PLV ++ +K G T + + D+ + L + + A + +
Sbjct: 695 AARTDDQPLVLIKKTANKELAGATQIFVYSKDQKNVFVAVATALAQLNLSIQDAKIYSSN 754
Query: 296 SPEAYQEYYIRHVDGNPISSEAE-----RQRVINCL------EAAIKRRTSEGIS----- 339
S +++ + DG P+ + +Q +I+ L I RRT +
Sbjct: 755 SGHTIDTFFVLNEDGEPLGNNPTLLKKIQQTLIDELGLVDNYRDVIGRRTPRRLKYFASP 814
Query: 340 ---------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVV 384
LE+ DR GLL+ + RIF + + + A++ T G + ++F++V
Sbjct: 815 TRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFFIV 874
Query: 385 DASGNPVKSETI-ESVRKEI 403
D+ G P+ + E +++EI
Sbjct: 875 DSQGKPLGDPVLCEKLQQEI 894
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFH 81
+P R +++ R ++++V S ++ G L + ++ D D+ + A I++ GE D+F
Sbjct: 813 SPTRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFF 872
Query: 82 VTDQNGNKLSEDDVSERIQQSL 103
+ D G L + + E++QQ +
Sbjct: 873 IVDSQGKPLGDPVLCEKLQQEI 894
>gi|242280894|ref|YP_002993023.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
gi|242123788|gb|ACS81484.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
Length = 845
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P R++VDN S+ + TLI+V + ++ G L ++V +++ +R A IS+ GE DVFHV
Sbjct: 757 PTRISVDNDSSAECTLIEVITQDRSGILYDMVASFARMNINLRMARISTTGESVFDVFHV 816
Query: 83 TDQNGNKLSEDDVSER 98
G ++ ED + R
Sbjct: 817 EGPEGGRI-EDHIHLR 831
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 88/208 (42%), Gaps = 28/208 (13%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT-SEATGLPIDDP 183
H + +T RD+ L + VL+ N++ AEV++ + A ++I + A P
Sbjct: 660 HIKLVITARDQNFLFAAQSGVLALHSVNILSAEVFSWSDGTALNIFIVEAPAENCP---S 716
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVD-STHKERRLHQMMYADRDYDMNYAESGSAS 242
D A+++R ++Y L G +++D HK+R N + S
Sbjct: 717 DIWARVERSIMYALTG---------RLALDYRLHKKR--------------NSLLAKSVP 753
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
R ++V++ + T++ + DR +L+D V + M + A + +
Sbjct: 754 SRVPTRISVDNDSSAECTLIEVITQDRSGILYDMVASFARMNINLRMARISTTGESVFDV 813
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAI 330
+++ +G I + +I+ LE ++
Sbjct: 814 FHVEGPEGGRIEDHIHLRELISALEYSL 841
>gi|384260480|ref|YP_005415666.1| [protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
gi|378401580|emb|CCG06696.1| [Protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
Length = 917
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN +++ T+I+V+ ++ G L + Q L + + I A IS+ GE +DVF+V
Sbjct: 825 PPRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYV 884
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ +I+++L
Sbjct: 885 KDVFGMKVVHKTKLAQIREAL 905
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
QA+ HT IE+ GRDRPG L V L+ + + A + T+ R+ V Y+ + G+
Sbjct: 833 QASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYV-KDVFGMK 891
Query: 180 IDDPDTLAKIKRLL 193
+ LA+I+ L
Sbjct: 892 VVHKTKLAQIREAL 905
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 22/197 (11%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S++ ++ +M A + T MA + G PI +P+ + ++ R +
Sbjct: 735 DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQTLDGRPIAEPERIERLARTV 794
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
VL G + A+ + R H + P V +++
Sbjct: 795 RGVLTG---TIALARALQEQAPRLPERAHALTV-------------------PPRVLIDN 832
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
K +TV+ + DRP L LT + + A + +Y++ V G +
Sbjct: 833 QASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGMKV 892
Query: 314 SSEAERQRVINCLEAAI 330
+ + ++ LEAAI
Sbjct: 893 VHKTKLAQIREALEAAI 909
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR G L VT+ G+ ++ A ++T G + V+VFYV D G V +T
Sbjct: 841 IEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGMKVVHKT 896
>gi|423097068|ref|ZP_17084864.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
gi|397889129|gb|EJL05612.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
Length = 777
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 566 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 625
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 626 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPLVTIHN 685
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 686 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 745
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N + R+ T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 679 PLVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT 738
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q+++
Sbjct: 739 DAHNQPLSDPQLCSRLQEAI 758
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 566 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 625
Query: 80 FHVTDQNGNKLSE---------DDVSERIQ---------QSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + + D ++E ++ Q PR + V +
Sbjct: 626 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPLVTIHN 685
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A + T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 686 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQP 744
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
+ DP ++++ ++ L +++ + T +S+
Sbjct: 745 LSDPQLCSRLQEAIVRHLSVNQEPDAHMTRISI 777
>gi|407768112|ref|ZP_11115491.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288825|gb|EKF14302.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 917
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLL DVTR R+ L + A ++T G +AV+VFYV D G + S T
Sbjct: 846 IEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKDVFGLKIDSRT 901
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 119 VQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
++ ++ T I + D PGL S++ ++ NV+ A++ T MA + + G
Sbjct: 724 IETDIDATEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADGMALDTFFIQDTNGE 783
Query: 179 PIDDPDTLAKIKRLLLYVLKGD-RDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAE 237
+D L K+++ L V+ G R + D+ H+
Sbjct: 784 AFNDKSKLDKLRKTLEQVISGRLRPSQEIERRQIKDNKHR-------------------- 823
Query: 238 SGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP 297
+A + +P V +++ + +TV+ + DR LL+D TL D+ + A +
Sbjct: 824 --TAVFKVEPNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGE 881
Query: 298 EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIK 331
A +Y++ V G I S + +V L ++
Sbjct: 882 RAVDVFYVKDVFGLKIDSRTKFLQVKETLTQTLE 915
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 24/145 (16%)
Query: 77 MDVFHVTDQNGNKLSE----DDVSERIQQSLGPRARSFRSLRRS---------------- 116
+D F + D NG ++ D + + ++Q + R R + + R
Sbjct: 772 LDTFFIQDTNGEAFNDKSKLDKLRKTLEQVISGRLRPSQEIERRQIKDNKHRTAVFKVEP 831
Query: 117 ---VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
+ +A+ HT IE+T RDR GLL +V L DL + A + T R V Y+
Sbjct: 832 NVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYV-K 890
Query: 174 EATGLPIDDPDTLAKIKRLLLYVLK 198
+ GL ID ++K L L+
Sbjct: 891 DVFGLKIDSRTKFLQVKETLTQTLE 915
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +DN ++R T+I++ + +++G L ++ + L DL L I A IS+ GE +DVF+V
Sbjct: 831 PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVK 890
Query: 84 DQNGNKL 90
D G K+
Sbjct: 891 DVFGLKI 897
>gi|296115100|ref|ZP_06833741.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295978201|gb|EFG84938.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 952
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+++++ ++ G L ++ ++D L I A+I++ G +DVF+V
Sbjct: 849 PPRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYV 908
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+++ E I+Q+L
Sbjct: 909 KDLFGLKITDKARLETIRQTL 929
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+ GRDRPGLL ++ A +SD K + A + T+ R V Y+ + GL I D
Sbjct: 863 TVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKAR 921
Query: 186 LAKIKRLLLYVLK 198
L I++ LL L+
Sbjct: 922 LETIRQTLLAGLQ 934
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DR GLL D+T + L + A +TT G +AV+VFYV D G + + +E+
Sbjct: 865 VEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVKDLFGLKITDKARLET 924
Query: 399 VRKEI 403
+R+ +
Sbjct: 925 IRQTL 929
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 83/208 (39%), Gaps = 23/208 (11%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S + ++ +++ A + T + MA +A G ++P
Sbjct: 750 TEVTIYAADHPGLFSRIAGAVAIAGASIVDARIHTMTNGMALDTLWVQDADGAAFEEPQQ 809
Query: 186 LAKIKRLLLYVLKGDRD-KRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
LA++ L+ L G + + + S + R +H
Sbjct: 810 LARLSMLVEQALSGQLNISKEIASCGRRGSGRRMRAIH---------------------- 847
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P V +++ TVV + DRP LL D T++D + + A + A +Y
Sbjct: 848 VPPRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFY 907
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKR 332
++ + G I+ +A + + L A +++
Sbjct: 908 VKDLFGLKITDKARLETIRQTLLAGLQK 935
>gi|148825740|ref|YP_001290493.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229847338|ref|ZP_04467440.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
gi|166226151|sp|A5UBF9.1|GLND_HAEIE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148715900|gb|ABQ98110.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229809763|gb|EEP45487.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
Length = 863
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ + E
Sbjct: 735 ELNGELVEFDRRRELEQALTLALQSEKLSALSITPNRQLQHFTVQTDVRFLHENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+AGLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
EHT +EL D+ GLL++V + S+L N++ A++ T + A +I + G +D
Sbjct: 791 EHTEMELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEK-AEDFFILTNQFGQALD 847
>gi|294851544|ref|ZP_06792217.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
gi|294820133|gb|EFG37132.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
Length = 934
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ + G L EL +++DL L I A+I++ E +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G D PGLLSE+ ++SDL ++ A + T + ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
>gi|16124269|ref|NP_418833.1| PII uridylyl-transferase [Caulobacter crescentus CB15]
gi|221232952|ref|YP_002515388.1| PII uridylyl-transferase [Caulobacter crescentus NA1000]
gi|22256766|sp|Q9AC53.1|GLND_CAUCR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798830|sp|B8GWX0.1|GLND_CAUCN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|13421101|gb|AAK22001.1| [protein-pII] uridylyltransferase [Caulobacter crescentus CB15]
gi|220962124|gb|ACL93480.1| protein-PII uridylyltransferase [Caulobacter crescentus NA1000]
Length = 940
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 27/187 (14%)
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI--DDPDTLA 187
+ +DR GL +++ +S L NV+GA V+T A V+ + TG P ++P L
Sbjct: 740 IAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRALR 799
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
++ L KGD A++V+ + +A P
Sbjct: 800 RLADALEAAGKGD--------ALAVEPRRGSEQTRAAAFA-----------------IAP 834
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRH 307
VT+++ TVV DRP LL TL D + A + A +Y++
Sbjct: 835 SVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQT 894
Query: 308 VDGNPIS 314
+G ++
Sbjct: 895 TEGGKVT 901
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+DN ++ AT+++ ++ G L L + L D L I+ A+I GE +D F+V
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893
Query: 84 DQNGNKLSE 92
G K+++
Sbjct: 894 TTEGGKVTD 902
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV-TTRGSQAVNVFYVVDASGNP 390
R S + + +DR GL +D+ G +V A V T+R QA++VFYV D +G P
Sbjct: 730 RPGSNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAP 789
Query: 391 VKSETIESVRKEIGLTILRVKDDAYSKSP 419
E ++R+ K DA + P
Sbjct: 790 FGCENPRALRRLADALEAAGKGDALAVEP 818
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 36 ATLIKVDSANKRGSLLELVQVLNDL--DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSED 93
A + + + ++RG +L ++ L +++ R + S G+ +DVF+V D G +
Sbjct: 735 AAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQA-LDVFYVQDVTGAPFGCE 793
Query: 94 D--------------------VSERIQQSLGPRARSFRSLRRSVGVQ--AALEHTTIELT 131
+ E + S RA +F ++ SV + A+ + T +E +
Sbjct: 794 NPRALRRLADALEAAGKGDALAVEPRRGSEQTRAAAF-AIAPSVTIDNDASNDATVVEAS 852
Query: 132 GRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
GRDRPGLL + L+D ++ A + + R Y+ + G
Sbjct: 853 GRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGG 898
>gi|399912538|ref|ZP_10780852.1| PII uridylyl-transferase [Halomonas sp. KM-1]
Length = 893
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V RIF E +S++ A++ T G + +VF++ D SG P+
Sbjct: 821 LELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITDKSGAPL 872
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
E T +ELT DRPGLL+ V + + ++ A++ T R+ V +IT + +G P+ DP
Sbjct: 817 ERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFIT-DKSGAPLTDP 875
Query: 184 DTLAKIKRLLLYVL 197
+ +++ L+ VL
Sbjct: 876 ERQQRLRARLIEVL 889
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 46/81 (56%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P V ++ + TL+++ + ++ G L + ++ + D+ + A I++ GE DVF +
Sbjct: 805 PTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFI 864
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD++G L++ + +R++ L
Sbjct: 865 TDKSGAPLTDPERQQRLRARL 885
>gi|126173686|ref|YP_001049835.1| PII uridylyl-transferase [Shewanella baltica OS155]
gi|386340444|ref|YP_006036810.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS117]
gi|125996891|gb|ABN60966.1| metal dependent phosphohydrolase [Shewanella baltica OS155]
gi|334862845|gb|AEH13316.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS117]
Length = 861
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 33/200 (16%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+ +PLV V T +G T + + C DRPK LF V + D + + H I S + Y
Sbjct: 659 QDEPLVLVSKHTTRGGTELFVYCQDRPK-LFATVMAVLDNKNINVHDANIMTSKDNYALD 717
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS------------- 339
+ I DG P+S + Q + LE A+ R+ S +
Sbjct: 718 TFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQVSFLES 777
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+EL D GLL+ V IF ++ A++TT G +A + F + G +
Sbjct: 778 SRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTNDGLQL- 836
Query: 393 SETIESVRKEIGLTILRVKD 412
+ET E+ ++ + L K+
Sbjct: 837 NETQENTLRDALIRALSAKN 856
>gi|455651557|gb|EMF30283.1| PII uridylyl-transferase [Streptomyces gancidicus BKS 13-15]
Length = 808
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV ++R AT+I+V + + G L + + L D + +R A++S+ G +D F+V
Sbjct: 723 PPRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYV 782
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T + G L ++ V+ +++++L
Sbjct: 783 TQERGVPLPGEEAVAVARKLEEAL 806
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + G+ V A V+T G+ AV+ FYV G P+ E +V
Sbjct: 739 IEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVTQERGVPLPGEEAVAV 798
Query: 400 RKEI 403
+++
Sbjct: 799 ARKL 802
>gi|345872800|ref|ZP_08824728.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodococcus drewsii AZ1]
gi|343917991|gb|EGV28764.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodococcus drewsii AZ1]
Length = 889
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 32/196 (16%)
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPE 298
+A +PLV + T +G T + + DR L TL M + A V+ +
Sbjct: 688 AADTSQEPLVVIRPITARGGTEIFIYTRDRANLFALTTATLDQMGLDIMDARVMTTDDGM 747
Query: 299 AYQEYYIRHVDGNPISSEAERQRVINCLEA--------------AIKRR----------- 333
A Y I DG P+ + + + L A+ RR
Sbjct: 748 AVNSYQILDQDGEPVDDALRMEEIRSTLAHNIAEEGDGHIRVARAVPRRLRHFPIETRIS 807
Query: 334 -----TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+ + L DR GLL++V +F++ G+ + A++ T G++ +VF++
Sbjct: 808 FSCDDPNHRTIMRLTTLDRPGLLAEVGAVFQQCGIRLQNAKIATVGAEVDDVFFITSEDD 867
Query: 389 NPVKSET-IESVRKEI 403
P+ ET + +R+EI
Sbjct: 868 TPITCETALACLRREI 883
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 25/190 (13%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLND---LDLIIRRAYISSDGEWFMDVF 80
P V + + R T I + + + R +L L D LD++ R + DG ++ +
Sbjct: 695 PLVVIRPITARGGTEIFIYTRD-RANLFALTTATLDQMGLDIMDARVMTTDDG-MAVNSY 752
Query: 81 HVTDQNG------------------NKLSEDDVSERIQQSLGPRARSFR-SLRRSVGVQA 121
+ DQ+G N E D R+ +++ R R F R S
Sbjct: 753 QILDQDGEPVDDALRMEEIRSTLAHNIAEEGDGHIRVARAVPRRLRHFPIETRISFSCDD 812
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
T + LT DRPGLL+EV AV + A++ T + + V +ITSE PI
Sbjct: 813 PNHRTIMRLTTLDRPGLLAEVGAVFQQCGIRLQNAKIATVGAEVDDVFFITSE-DDTPIT 871
Query: 182 DPDTLAKIKR 191
LA ++R
Sbjct: 872 CETALACLRR 881
>gi|398892828|ref|ZP_10645783.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
gi|398184929|gb|EJM72355.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
Length = 900
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 809 DAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 868
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R+ T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + R+Q ++
Sbjct: 862 DANNHPLSDPLLCSRLQDAI 881
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARIKQIRDGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A + T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNH 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|78357352|ref|YP_388801.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
gi|78219757|gb|ABB39106.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
Length = 872
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP----DT 185
+D+PGL S + VL+ +V A+ + + V+ S P DP D
Sbjct: 693 FAAKDQPGLFSVLTGVLALHGLDVFSADAFVWGGGVVLDVFRVS-----PPPDPLYARDF 747
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
AK++ + + L G +S+D +E R + + + GR+
Sbjct: 748 WAKVRGSVHFALTGK---------LSLDFRLEEMRSRSLSPVQK----------AGGGRT 788
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+ VT+++ Y+V+++ PDRP LL+D T+ M+ + A + + + +
Sbjct: 789 E--VTIDNAISDFYSVIDITAPDRPVLLYDIARTMQAMRLDIQFARIATHGMQTSDSFSV 846
Query: 306 RHVDGNPISSEAERQRVINCLEAAI 330
R V GN + E + + V L A+
Sbjct: 847 RDVFGNKLLEEQQCEEVRQALLHAV 871
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
VT+DN + ++I + + ++ L ++ + + + L I+ A I++ G D F V D
Sbjct: 790 VTIDNAISDFYSVIDITAPDRPVLLYDIARTMQAMRLDIQFARIATHGMQTSDSFSVRDV 849
Query: 86 NGNKLSEDDVSERIQQSL 103
GNKL E+ E ++Q+L
Sbjct: 850 FGNKLLEEQQCEEVRQAL 867
>gi|302558147|ref|ZP_07310489.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
gi|302475765|gb|EFL38858.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
Length = 823
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV ++R AT+I+V + + G L + + L D + +R A++S+ G +D F+V
Sbjct: 738 PPRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYV 797
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T + G L ++ V+ +++++L
Sbjct: 798 TQEQGVPLPGEEAVAVARKLEETL 821
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + G+ V A V+T G+ AV+ FYV G P+ E +V
Sbjct: 754 IEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVTQEQGVPLPGEEAVAV 813
Query: 400 RKEIGLTI 407
+++ T+
Sbjct: 814 ARKLEETL 821
>gi|349686456|ref|ZP_08897598.1| PII uridylyl-transferase [Gluconacetobacter oboediens 174Bp2]
Length = 954
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+ GRDRPGLL +V A LS+ K + A + T+ R V Y+ + GL I D
Sbjct: 865 TVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKGR 923
Query: 186 LAKIKRLLLYVLK 198
L +I+ LL L+
Sbjct: 924 LDRIRTTLLAGLQ 936
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+++++ ++ G L ++ L++ L I A+I++ G +DVF+V
Sbjct: 851 PPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYV 910
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+++ +RI+ +L
Sbjct: 911 KDLFGLKITDKGRLDRIRTTL 931
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 32/220 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S++ ++ +++ A + T + MA +A G ++P
Sbjct: 752 TEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAAFEEPQQ 811
Query: 186 LAKIKRLLLYVLKG--DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
LA++ L+ L G + ++ A V S + R +H
Sbjct: 812 LARLSLLVEQALTGHLNINREIAQCGRRV-SGRRMRAIH--------------------- 849
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
P V +++ TVV + DRP LL D L++ + + A + A +
Sbjct: 850 -VPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVF 908
Query: 304 YIRHVDGNPISSEAERQRVINCL-------EAAIKRRTSE 336
Y++ + G I+ + R+ L EAA +RR+SE
Sbjct: 909 YVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRRSSE 948
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+E+ DR GLL DVT E L + A +TT G +AV+VFYV D G
Sbjct: 867 VEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 915
>gi|148259925|ref|YP_001234052.1| PII uridylyl-transferase [Acidiphilium cryptum JF-5]
gi|338981069|ref|ZP_08632305.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
gi|146401606|gb|ABQ30133.1| metal dependent phosphohydrolase [Acidiphilium cryptum JF-5]
gi|338208035|gb|EGO95934.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
Length = 938
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 27/202 (13%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLN--DLDLIIRRAYISSDGEWFMDVF 80
P V + R T + V +A+ G + L ++ R + +DG +D F
Sbjct: 730 PLTVAAEPLPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGM-ALDTF 788
Query: 81 HVTDQNGNKLSEDD----VSERIQQSLGPRARSFRSLRRS-------------------V 117
+ D G L +S I+Q L R R + ++ V
Sbjct: 789 WIQDAGGGSLEAPHRLAKISAVIEQVLSGRLRLATEIEKAANSVVGGRMRAIHVPPRVVV 848
Query: 118 GVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
A+ HT IE+ GRDRPGLL +V A ++ + A + T+ R V Y+ + G
Sbjct: 849 DNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV-KDVFG 907
Query: 178 LPIDDPDTLAKIKRLLLYVLKG 199
L + + LA+++ L+ L G
Sbjct: 908 LKVQNERKLAQLRSALIEALAG 929
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL DVT GL + A +TT G +AV+VFYV D G V++E
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFGLKVQNE 913
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 31/208 (14%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D GL S + L+ ++ A + T MA + +A G ++ P LAKI ++
Sbjct: 752 DHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGSLEAPHRLAKISAVI 811
Query: 194 LYVLKG-----DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
VL G +++AN+ V + R +H P
Sbjct: 812 EQVLSGRLRLATEIEKAANSVVG----GRMRAIH----------------------VPPR 845
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V V++ +TV+ + DRP LL D +T + A + A +Y++ V
Sbjct: 846 VVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDV 905
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSE 336
G + +E + ++ + L A+ R E
Sbjct: 906 FGLKVQNERKLAQLRSALIEALAGRPHE 933
>gi|378697957|ref|YP_005179915.1| uridylyltransferase [Haemophilus influenzae 10810]
gi|301170473|emb|CBW30080.1| uridylyltransferase [Haemophilus influenzae 10810]
Length = 863
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ ++ E
Sbjct: 735 ELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+AGLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNRFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
>gi|347761851|ref|YP_004869412.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
gi|347580821|dbj|BAK85042.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
Length = 965
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+ GRDRPGLL +V A LS+ K + A + T+ R V Y+ + GL I D +
Sbjct: 876 TVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKER 934
Query: 186 LAKIKRLLLYVLK 198
L +++ LL L+
Sbjct: 935 LDRVRTTLLAGLQ 947
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+++++ ++ G L ++ L++ L I A+I++ G +DVF+V
Sbjct: 862 PPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYV 921
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+++ + +R++ +L
Sbjct: 922 KDLFGLKITDKERLDRVRTTL 942
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 40/224 (17%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S++ ++ +++ A + T + MA +A G ++P
Sbjct: 763 TEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAAFEEPQQ 822
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L ++ L+ L G + ++ + RRL SGR
Sbjct: 823 LGRLSLLIEQALTG-------HLNINREIAQCGRRL--------------------SGRR 855
Query: 246 ------KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
P V +++ TVV + DRP LL D L++ + + A + A
Sbjct: 856 MRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRA 915
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCL-------EAAIKRRTSE 336
+Y++ + G I+ + RV L EAA +RR+SE
Sbjct: 916 VDVFYVKDLFGLKITDKERLDRVRTTLLAGLQEAEAAAQRRSSE 959
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+E+ DR GLL DVT E L + A +TT G +AV+VFYV D G
Sbjct: 878 VEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 926
>gi|424039494|ref|ZP_17777859.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
gi|408892923|gb|EKM30271.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
Length = 874
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
+KPLV + +G T V + PD+P L V L + V+
Sbjct: 677 AKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I E +I HV DG P + R + ++ L K
Sbjct: 737 MVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRL 852
Query: 392 KSETIESVRKEI 403
E +R+++
Sbjct: 853 SEEQQAELREKL 864
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 18 VLRMN---PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM P V + + R T + V S ++ +V L+ + + A I S D
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSE---------------DDVSERIQQSLGPRARSFRSLRRSV 117
G + +D F V DQ+G + E D +I+ P +++ V
Sbjct: 730 G-YVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 118 GV--QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ + T +E D PGLL++V +DL N+ A++ T R + +TSEA
Sbjct: 789 DFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
>gi|419839139|ref|ZP_14362557.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
gi|386909850|gb|EIJ74514.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
Length = 863
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I A+ + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITAQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ + E
Sbjct: 735 ELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFTVQTDVRFLHENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
EHT +EL D+PGLL++V + S+L N++ A++ T + A +I + G +D
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK-AEDFFILTNQFGQALD 847
>gi|420241261|ref|ZP_14745409.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
gi|398072002|gb|EJL63238.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
Length = 945
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N + K T+I+V+ ++ G L ++ VL DL L I A I++ GE +D F+V
Sbjct: 826 PPSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARSFRS 112
TD G K+ V+E Q ++ R ++ S
Sbjct: 886 TDLVGQKV----VNENRQGNIAARLKAVMS 911
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V +E
Sbjct: 842 IEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVTDLVGQKVVNE 896
>gi|149915372|ref|ZP_01903899.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
gi|149810661|gb|EDM70502.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
Length = 922
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + NV+ A +T A+ + +A G P + + L +++ ++
Sbjct: 741 DHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDAEGSPYE-AERLQRLRDMI 799
Query: 194 LYVLKGDRDKRSANTAV-SVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVE 252
LKGD A A+ S D K R ++ +T +
Sbjct: 800 RKTLKGDV---VAGEAIRSRDKLKKRERAFKV---------------------PTHITFD 835
Query: 253 SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP 312
+ + YT++ + DRP LL+D TL + + A + + +Y++ + G
Sbjct: 836 NEGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDMFGLK 895
Query: 313 ISSEAERQRVINCLEAAIKRRTSEG 337
SEA+++ LE ++ SEG
Sbjct: 896 FHSEAKQK----ALEKKLRTAISEG 916
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +T DN + T+I+VD+ ++ G L +L + L + ++ I A I++ GE +D F+V
Sbjct: 829 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYV 888
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARS 109
D G K SE Q++L + R+
Sbjct: 889 KDMFGLKFH----SEAKQKALEKKLRT 911
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL D+TR + + A + T G Q V+ FYV D G SE
Sbjct: 845 IEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDMFGLKFHSE 899
>gi|395500382|ref|ZP_10431961.1| PII uridylyl-transferase [Pseudomonas sp. PAMC 25886]
Length = 900
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + +G I ER + I + I+RR +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q+++
Sbjct: 862 DADNQPLSDPELCRRLQEAI 881
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 27/199 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRV-PRQLKHFAFAPEVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQ 866
Query: 179 PIDDPDTLAKIKRLLLYVL 197
P+ DP+ +++ ++ L
Sbjct: 867 PLSDPELCRRLQEAIVQQL 885
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 81/226 (35%), Gaps = 38/226 (16%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A V T +S+ YI + G I D+P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ KI++ L L R+ + ++ R+L +A
Sbjct: 765 RVKKIRKGLTDAL------RNPDDYPTIIQRRVPRQLKHFAFA----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + + TV+ L PDRP LL + + +A + ++
Sbjct: 802 --PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGL 350
I D P+S + + RR E I +L G+
Sbjct: 860 ITDADNQPLS------------DPELCRRLQEAIVQQLSVNQETGV 893
>gi|349699981|ref|ZP_08901610.1| PII uridylyl-transferase [Gluconacetobacter europaeus LMG 18494]
Length = 969
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+ GRDRPGLL +V A LS+ K + A + T+ R V Y+ + GL I D
Sbjct: 880 TVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKGR 938
Query: 186 LAKIKRLLLYVLK 198
L +I+ LL L+
Sbjct: 939 LDRIRTTLLAGLQ 951
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+++++ ++ G L ++ L++ L I A+I++ G +DVF+V
Sbjct: 866 PPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYV 925
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+++ +RI+ +L
Sbjct: 926 KDLFGLKITDKGRLDRIRTTL 946
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+E+ DR GLL DVT E L + A +TT G +AV+VFYV D G
Sbjct: 882 VEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 930
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 40/224 (17%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + + D PGL S++ ++ +++ A + T + MA +A G ++P
Sbjct: 767 TEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAAFEEPQQ 826
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
LA++ L+ L G ++ + RRL SGR
Sbjct: 827 LARLSLLVEQALTG-------RININREIAQCGRRL--------------------SGRR 859
Query: 246 ------KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
P V +++ TVV + DRP LL D L++ + + A + A
Sbjct: 860 MRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRA 919
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCL-------EAAIKRRTSE 336
+Y++ + G I+ + R+ L EAA +R++SE
Sbjct: 920 VDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRQSSE 963
>gi|407799900|ref|ZP_11146768.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
gi|407057892|gb|EKE43860.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
Length = 930
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + NV+ A +T A+ V+ + G P D P L +++ +
Sbjct: 748 DHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQDGDGHPYD-PHKLPRLRGTI 806
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
+L+G+ R +D+ K ++ +RD+ R + ++
Sbjct: 807 GKILRGEVIARE-----GLDTRDKIKK------RERDF------------RVPTSIAFDN 843
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ YT+V + DRP LL+D TL + A + + +Y++ + G I
Sbjct: 844 EGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDMFGLKI 903
Query: 314 SSEAERQRVINCLEAAIKRRTSEGI 338
S+A+ +AA++R+ E I
Sbjct: 904 YSDAK--------QAALERKLREAI 920
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIES 398
+E+ DR GLL D+TR +S++ A + T G+Q V+ FYV D G + S+ ++
Sbjct: 852 VEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDMFGLKIYSDAKQA 910
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P + DN + T+++VD+ ++ G L +L + L + I A I++ G +D F+V
Sbjct: 836 PTSIAFDNEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYV 895
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ D +++ L
Sbjct: 896 KDMFGLKIYSDAKQAALERKL 916
>gi|395794807|ref|ZP_10474124.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
gi|395341076|gb|EJF72900.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
Length = 900
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + +G I ER + I + I+RR +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q+++
Sbjct: 862 DADNQPLSDPELCRRLQEAI 881
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 27/199 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRV-PRQLKHFAFAPEVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQ 866
Query: 179 PIDDPDTLAKIKRLLLYVL 197
P+ DP+ +++ ++ L
Sbjct: 867 PLSDPELCRRLQEAIVQQL 885
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 81/226 (35%), Gaps = 38/226 (16%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A V T +S+ YI + G I D+P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ KI++ L L R+ + ++ R+L +A
Sbjct: 765 RVKKIRKGLTDAL------RNPDDYPTIIQRRVPRQLKHFAFA----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + + TV+ L PDRP LL + + +A + ++
Sbjct: 802 --PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGL 350
I D P+S + + RR E I +L G+
Sbjct: 860 ITDADNQPLS------------DPELCRRLQEAIVQQLSVNQETGV 893
>gi|421143790|ref|ZP_15603722.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
gi|404505051|gb|EKA19089.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + +G I ER + I + I+RR +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q+++
Sbjct: 862 DADNQPLSDPELCRRLQEAI 881
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 27/199 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRV-PRQLKHFAFAPEVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQ 866
Query: 179 PIDDPDTLAKIKRLLLYVL 197
P+ DP+ +++ ++ L
Sbjct: 867 PLSDPELCRRLQEAIVQQL 885
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 81/226 (35%), Gaps = 38/226 (16%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A V T +S+ YI + G I D+P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ KI++ L L R+ + ++ R+L +A
Sbjct: 765 RVKKIRKGLTDAL------RNPDDYPTIIQRRVPRQLKHFAFA----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + + TV+ L PDRP LL + + +A + ++
Sbjct: 802 --PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGL 350
I D P+S + + RR E I +L G+
Sbjct: 860 ITDADNQPLS------------DPELCRRLQEAIVQQLSVNQETGV 893
>gi|182680031|ref|YP_001834177.1| PII uridylyl-transferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635914|gb|ACB96688.1| UTP-GlnB uridylyltransferase, GlnD [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 953
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 46/68 (67%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V++DN+ + + T+I+V ++ G L +L ++L+ +L I A+I + GE +DVF+VT
Sbjct: 853 PEVSIDNSLSSRFTVIEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVT 912
Query: 84 DQNGNKLS 91
D +G K++
Sbjct: 913 DLHGAKIT 920
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIES- 398
+E+ DR GLL D+TRI + L++ A + T G + V+VFYV D G + + ++
Sbjct: 868 IEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVTDLHGAKITTAARQTA 927
Query: 399 VRKEI 403
VR++I
Sbjct: 928 VRRQI 932
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 88/227 (38%), Gaps = 38/227 (16%)
Query: 101 QSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT 160
+ +GP + +R V T + + D P LLS + + N++ A+V+T
Sbjct: 735 EMVGPLTHTLTDAQRGV--------TELTVIAPDHPNLLSTIAGACAASAANIVDAQVFT 786
Query: 161 HNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERR 220
MA S A D D L + R+ L + +R+ + +S+
Sbjct: 787 TTDSMALDTITISRAFDF---DEDELRRASRIALSI------ERALSGQISM-------- 829
Query: 221 LHQMMYADRDYDMNYAESGSASGRS-----KPLVTVESCTDKGYTVVNLRCPDRPKLLFD 275
RD + +E+ + GR P V++++ +TV+ + DR LL+D
Sbjct: 830 --------RDIMVAKSEASPSKGRGATFKVHPEVSIDNSLSSRFTVIEVSGLDRTGLLYD 881
Query: 276 AVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRV 322
L+ + A ++ +Y+ + G I++ A + V
Sbjct: 882 LTRILSKANLNIGSAHIVTFGERVVDVFYVTDLHGAKITTAARQTAV 928
>gi|329847428|ref|ZP_08262456.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
gi|328842491|gb|EGF92060.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
Length = 948
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 30/166 (18%)
Query: 33 NRKATLIKVDSANKRGSLLELVQVLNDL--DLIIRRAYISSDGEWFMDVFHVTDQNGNKL 90
R AT + + ++ G +L + ++ +++ + + SS G +DVF+V D G
Sbjct: 743 GRNATAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGH-ALDVFYVQDSQGLPF 801
Query: 91 SEDDVSERIQQS--------LG--PRARSFRSLRRSVGVQAAL--------------EHT 126
DD ++R++Q+ LG P ++RS G AA T
Sbjct: 802 GHDD-AQRMKQAEQQLEQAALGHLPPPVAYRSAL--AGRTAAFAIAPTVAFDDASKANAT 858
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
IE++GRDRPGLL+++ V++ L+ ++ A + + R Y+T
Sbjct: 859 IIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVT 904
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 29/183 (15%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T ++ DRPGL +++ +++ NV+GA+V+T +S A V+ ++ GLP D
Sbjct: 747 TAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGHALDVFYVQDSQGLPFGHDD- 805
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNY--AESG-SAS 242
R K++ E++L Q + Y A +G +A+
Sbjct: 806 -------------AQRMKQA------------EQQLEQAALGHLPPPVAYRSALAGRTAA 840
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
P V + + T++ + DRP LL D V + ++ + A + A
Sbjct: 841 FAIAPTVAFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDA 900
Query: 303 YYI 305
+Y+
Sbjct: 901 FYV 903
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V D+ S AT+I+V ++ G L +LV V+ L + I A+I GE +D F+VT
Sbjct: 845 PTVAFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVT 904
Query: 84 DQ 85
D
Sbjct: 905 DH 906
>gi|388471183|ref|ZP_10145392.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
gi|388007880|gb|EIK69146.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q ++
Sbjct: 862 DADNQPLSDPELCRRLQDAI 881
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP+ +++
Sbjct: 868 LSDPELCRRLQ 878
>gi|395648131|ref|ZP_10435981.1| PII uridylyl-transferase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A VI S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP + R+ + L I+RR +
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q+++
Sbjct: 862 DADNQPLSDPELCRRLQEAI 881
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D G + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ V + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 867
Query: 180 IDDPDTLAKIKRLLLYVL 197
+ DP+ +++ ++ L
Sbjct: 868 LSDPELCRRLQEAIVQQL 885
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 80/226 (35%), Gaps = 38/226 (16%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A V T +S+ YI + G I D+P
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNPA 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ KI+ L L R+ + ++ R+L +A
Sbjct: 765 RVKKIREGLTEAL------RNPDDYPTIIQRRVPRQLKHFAFA----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + + TV+ L PDRP LL + + +A + ++
Sbjct: 802 --PQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCEDRAGL 350
I D P+S + + RR E I +L +G+
Sbjct: 860 ITDADNQPLS------------DPELCRRLQEAIVQQLSVNQESGV 893
>gi|423690335|ref|ZP_17664855.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
gi|388002188|gb|EIK63517.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q ++
Sbjct: 862 DADNQPLSDPELCLRLQAAI 881
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP+ +++
Sbjct: 868 LSDPELCLRLQ 878
>gi|238792757|ref|ZP_04636388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
gi|238727865|gb|EEQ19388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
Length = 880
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 33/182 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
+KPLV V +G T + + PDRP L V L V+ A + A +
Sbjct: 683 TKPLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTF 742
Query: 304 YIRHVDGNPISSEAERQRVI-NCLEAAIK---------RRTSEGIS-------------- 339
+ DG+P++ + R +I + LE A+ RR S +
Sbjct: 743 IVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTH 800
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D +
Sbjct: 801 NERRTYLELIALDQPGLLARVGGIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSI 860
Query: 394 ET 395
ET
Sbjct: 861 ET 862
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 685 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 744
Query: 83 TDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRRSVGVQAALEH-------- 125
+ +G+ L++D +S ++Q++ PR R R V
Sbjct: 745 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 804
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 805 TYLELIALDQPGLLARVGGIFADLGLSLHSARITTIGERVEDLFVLA 851
>gi|224100729|ref|XP_002311991.1| predicted protein [Populus trichocarpa]
gi|222851811|gb|EEE89358.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 15/186 (8%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIR--RAYISSDGEWF 76
L NP VTVDN + TL+K+ + +G + ++ + L D ++ I R S G
Sbjct: 229 LAHNPVSVTVDNAFSPSHTLVKILCKDHKGLIYDITRTLKDYNIQISYGRFLASRKGNCE 288
Query: 77 MDVFHVTDQNGNKLSEDDVSERIQQSLGPRARS--FRSLRRSVGVQAA----LEHTTIEL 130
+D+F + +G K+ V Q +L R R LR +V + L +EL
Sbjct: 289 VDLF-LMQADGKKI----VDPNKQNALCSRLRMELLCPLRLAVVSRGPDTELLVANPVEL 343
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTH--NSRMASVVYITSEATGLPIDDPDTLAK 188
+GR RP + ++ L +L + E+ H + R V I E GLP+
Sbjct: 344 SGRGRPLVFHDITLALKNLNTPIFSVEIGRHMIHDREWEVYRILLEGDGLPVSRNKIEEG 403
Query: 189 IKRLLL 194
++++L+
Sbjct: 404 VRKVLM 409
>gi|387892452|ref|YP_006322749.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
gi|387162642|gb|AFJ57841.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DADNQPLSDPQLCLRLQAAI 881
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP +++
Sbjct: 868 LSDPQLCLRLQ 878
>gi|329296138|ref|ZP_08253474.1| PII uridylyl-transferase [Plautia stali symbiont]
Length = 880
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV V +G T + + PDRP LF AV D + + H I S + A
Sbjct: 683 SKPLVLVSPQATRGGTEIFIWSPDRP-YLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 741
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS-------------- 339
+ + DG+P++ + +I LE AI RR S +
Sbjct: 742 FIVLEPDGSPLAPD-RHPLIIQALEQAITQTQWVPPRTRRPSSRLKHFSVDTEVNFLPTH 800
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V +F + G+S+ A ++T G + ++F + ++ + +
Sbjct: 801 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERRALDA 860
Query: 394 E 394
E
Sbjct: 861 E 861
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V V + R T I + S ++ + L+ +L + A I S DG MD
Sbjct: 682 LSKPLVLVSPQATRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM-AMD 740
Query: 79 VFHVTDQNGNKLSEDDVSERIQ---------QSLGPRARSFRSLRRSVGVQAALE----H 125
F V + +G+ L+ D IQ Q + PR R S + V + H
Sbjct: 741 TFIVLEPDGSPLAPDRHPLIIQALEQAITQTQWVPPRTRRPSSRLKHFSVDTEVNFLPTH 800
Query: 126 T----TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V V +DL ++ GA + T R+ + + +
Sbjct: 801 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAN 852
>gi|116786655|gb|ABK24191.1| unknown [Picea sitchensis]
gi|148908416|gb|ABR17321.1| unknown [Picea sitchensis]
Length = 306
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+V +D S+ AT+++V ++ G+LL+ + L DL L + +A + D + F +T
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
+ G K+ + + E+I+ ++ P + + ++ + G+ E ++++ R
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEKPDVDISTRIH 219
Query: 134 ----------------DRPGLLSEVFAVLSDLKCNVMGAEVWT 160
DRPGLL E+ LSD+ V E T
Sbjct: 220 IYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDT 262
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+T DR G L + L DL NV+ A V+ +S + IT TG +DDP+
Sbjct: 113 TVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVS-----VDSTHK-----ERRLHQMMYADRDYDMNY 235
L +I+ ++ L + SA A+ V K R+H +Y D
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEKPDVDISTRIH--IYDD------- 223
Query: 236 AESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE 295
G ++ L+++E+ DRP LL + V TL+D+ V E
Sbjct: 224 -------GPNRSLLSIETA-------------DRPGLLVEIVKTLSDISVAVESGEFDTE 263
Query: 296 SPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
A ++++ + I + +Q V N L ++R T+E
Sbjct: 264 GLLAKAKFHVSYRGSALI--KPLQQVVANSLRYFLRRPTTE 302
>gi|153004974|ref|YP_001379299.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028547|gb|ABS26315.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 927
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
AL ++ + LT RDRPGLL+ V VL+ + ++ AEV++
Sbjct: 728 ALGYSELSLTARDRPGLLATVAGVLAAHRIDIQHAEVFS-------------------TP 768
Query: 182 DPDTLAKI--KRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESG 239
D L ++ + L ++ L+G D+R+ A + L +++ + D A
Sbjct: 769 DGSDLGRLAGRALDVFELRGP-DERAVEPARWRAARTD---LARVLAGEEGLDALLARRL 824
Query: 240 SASG-RSKPL------VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATV 292
AS KPL V +++ + + ++VV++ DR LL T ++ V A +
Sbjct: 825 RASSLPEKPLPRVPTKVVIDNDSARAHSVVDVFTADRVGLLHTLARTFYELGLSVDLARI 884
Query: 293 IAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR 332
E A +Y+R DG P+ E RV+ L AA+ R
Sbjct: 885 ATEGHRASDAFYVRTPDGAPLEGE-RAARVVAALTAAVSR 923
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+++ DR GLL + R F E GLSV A + T G +A + FYV G P++ E
Sbjct: 854 VDVFTADRVGLLHTLARTFYELGLSVDLARIATEGHRASDAFYVRTPDGAPLEGE 908
>gi|452751845|ref|ZP_21951590.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
gi|451961064|gb|EMD83475.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
Length = 908
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV V ++ + T+I+V++A++ G L L++ L D + I A+I++ GE +D F++T
Sbjct: 815 PRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT 874
Query: 84 DQNGNKLSEDDVSERIQ 100
D G KL D S+R++
Sbjct: 875 DLTGQKL---DGSQRLK 888
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 23/188 (12%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + D PGLL + +S N++ A + T MA G P D
Sbjct: 717 TQVRTYSEDHPGLLMRLAGAISLCGANIIDARIHTTRDGMALNNIGIQGHGGQPFGDAHQ 776
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L ++KR + VL G + RL + + A R A++ +
Sbjct: 777 LDRLKRSIADVLAG------------------KVRLREEL-AQRPLPQRRADAFAV---- 813
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P V V+ +TV+ + DRP LL+ + TL D + ++ A + A +Y+
Sbjct: 814 QPRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYM 873
Query: 306 RHVDGNPI 313
+ G +
Sbjct: 874 TDLTGQKL 881
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ DRPGLL + L D K + A + T+ R Y+T + TG +D
Sbjct: 828 TVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT-DLTGQKLDGSQR 886
Query: 186 LAKIKRLLLYVLK 198
L ++ LL +K
Sbjct: 887 LKGLETRLLNAVK 899
>gi|424033774|ref|ZP_17773185.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
gi|408873887|gb|EKM13070.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
Length = 874
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
+KPLV + +G T V + PD+P L V L + V+
Sbjct: 677 AKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I E +I HV DG P + R + ++ L K
Sbjct: 737 MVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRL 852
Query: 392 KSETIESVRKEI 403
E +R+ +
Sbjct: 853 SEEQQAELRERL 864
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 18 VLRMN---PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM P V + + R T + V S ++ +V L+ + + A I S D
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSE---------------DDVSERIQQSLGPRARSFRSLRRSV 117
G + +D F V DQ+G + E D +I+ P +++ V
Sbjct: 730 G-YVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 118 GV--QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+ + T +E D PGLL++V +DL N+ A++ T R + +TSEA
Sbjct: 789 DFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
>gi|398851998|ref|ZP_10608670.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
gi|398245286|gb|EJN30809.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A VI S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP + R+ + L I+RR +
Sbjct: 749 YIVLDNEGESIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DAHNQPLSDPLLCSRLQDAI 881
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDNEGESIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|222147341|ref|YP_002548298.1| PII uridylyl-transferase [Agrobacterium vitis S4]
gi|254798828|sp|B9JZI2.1|GLND_AGRVS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|221734331|gb|ACM35294.1| protein-P-II uridylyltransferase [Agrobacterium vitis S4]
Length = 941
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N+ + K T+I+++ ++ G L E+ VL DL L I A I++ GE +D F+V
Sbjct: 826 PHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVI 885
Query: 84 DQNGNKLSEDD 94
D G K++ ++
Sbjct: 886 DLVGQKITNEN 896
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL++VT + + L + A +TT G + ++ FYV+D G + +E
Sbjct: 841 IEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVIDLVGQKITNE 895
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
KP VT+ + +TV+ + C DR LL + L D+ ++ A + + +Y+
Sbjct: 825 KPHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYV 884
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ G I++E + + L+A + + E
Sbjct: 885 IDLVGQKITNENRQGSISVRLKAVMSEQPDE 915
>gi|296533888|ref|ZP_06896417.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296265785|gb|EFH11881.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 934
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+EL DR GLL DVT E GL + A +TT G +AV+VFYV D G V+++
Sbjct: 859 IELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKVEND 913
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 26/131 (19%)
Query: 77 MDVFHVTD-QNGNKLSEDDVSER-------IQQSLGPR---ARSFRSLRRSVGVQAALE- 124
+D F V D Q G D S + I+Q+L R + R +RR A++
Sbjct: 783 LDTFWVQDAQPGGAGGAFDASHKLARLSVLIEQALSGRLNLVQEIRKVRREPARLRAVQV 842
Query: 125 -------------HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
HT IEL GRDRPGLL +V A +S+ + A + T+ R V Y+
Sbjct: 843 PGRVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYV 902
Query: 172 TSEATGLPIDD 182
+ GL +++
Sbjct: 903 -KDVFGLKVEN 912
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P RV +DN ++ T+I+++ ++ G L ++ +++ L I A+I++ G +DVF+V
Sbjct: 843 PGRVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYV 902
Query: 83 TDQNGNKLSED 93
D G K+ D
Sbjct: 903 KDVFGLKVEND 913
>gi|124360724|gb|ABN08701.1| Amino acid-binding ACT [Medicago truncatula]
Length = 328
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 28 VDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNG 87
V+N+++ +T + + NK G L + +V L L I +A + +G++F F VTD +G
Sbjct: 53 VENSTSDNSTAFLIRARNKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHG 112
Query: 88 NKLSEDDVSERIQQSL 103
NK+ +D+ ERI+++L
Sbjct: 113 NKIEDDENLERIKRAL 128
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK-SETIESVRKE 402
++ GLL +TR+F+ GL++ +A V G F+V D+ GN ++ E +E +++
Sbjct: 68 ARNKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHGNKIEDDENLERIKRA 127
Query: 403 I 403
+
Sbjct: 128 L 128
>gi|323137182|ref|ZP_08072261.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
gi|322397540|gb|EFY00063.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
Length = 938
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE++G DR GLL ++ +S L N+ A + T R Y+T + TG I P
Sbjct: 850 YTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVT-DLTGAKIIAPQ 908
Query: 185 TLAKIKRLLLYVLKGDRDKRSA 206
A IKR LL V + +KR A
Sbjct: 909 RQATIKRQLLEVFQPSAEKRPA 930
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V VDN+ + T+I+V ++ G L +L ++ L+L I A+I + GE +D F+VT
Sbjct: 838 PEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVT 897
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K+ I++ L
Sbjct: 898 DLTGAKIIAPQRQATIKRQL 917
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL D+T + L++ A + T G +AV+ FYV D +G + + ++
Sbjct: 853 IEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTDLTGAKIIAPQRQAT 912
Query: 400 RKEIGLTILRVKDDAYSKSPPQESG 424
K +L V + K P + G
Sbjct: 913 IKR---QLLEVFQPSAEKRPARGQG 934
>gi|398984036|ref|ZP_10690345.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
gi|399011339|ref|ZP_10713671.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398118081|gb|EJM07821.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398156153|gb|EJM44577.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A VI S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP + R+ + L I+RR +
Sbjct: 749 YIVLDNEGESIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DAHNQPLSDPLLCSRLQDAI 881
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDNEGESIGDNPARVKQIREGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
>gi|329893768|ref|ZP_08269856.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
gi|328923491|gb|EGG30805.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
Length = 891
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 39/202 (19%)
Query: 228 DRDYDMNYAESGSASGRSK--PLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVC-TLT 281
+R D+ + AS + PLV + D T + + RP L F +C TL
Sbjct: 666 ERAEDIAWHTEAIASHHDQRTPLVLAKHTNDSSVANATQMFIHARSRPHL-FSLICATLE 724
Query: 282 DMQYVVYHATVI-AESPEAYQEYYIRHVDGNPISSEAERQR-VINCLEAAIK-------- 331
+ ++ A + A +++ G I +A+R R VI+ L A+
Sbjct: 725 QLDLSIHDARIYGASGGMTLDTFFVLDSSGETIEHDAQRTRHVISELTTALTESAKTNGI 784
Query: 332 --RRT-------------------SEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAE 369
RRT +G+S LE+ DR GLL+ + R+F E G+ + A+
Sbjct: 785 ATRRTPRQFKSFSIPTRAQITQDHDKGLSILEVISPDRPGLLARLGRVFVEFGIEIQTAK 844
Query: 370 VTTRGSQAVNVFYVVDASGNPV 391
+ T G + ++F++ DA NP+
Sbjct: 845 IQTLGERVEDLFFITDAQQNPI 866
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 23/169 (13%)
Query: 44 ANKRGSLLELV-QVLNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNGNKLSED-----DVS 96
A R L L+ L LDL I A I + G +D F V D +G + D V
Sbjct: 709 ARSRPHLFSLICATLEQLDLSIHDARIYGASGGMTLDTFFVLDSSGETIEHDAQRTRHVI 768
Query: 97 ERIQQSLGPRA-----------RSFRSLRRSVGVQAALEH----TTIELTGRDRPGLLSE 141
+ +L A R F+S Q +H + +E+ DRPGLL+
Sbjct: 769 SELTTALTESAKTNGIATRRTPRQFKSFSIPTRAQITQDHDKGLSILEVISPDRPGLLAR 828
Query: 142 VFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
+ V + + A++ T R+ + +IT +A PI DPD +I+
Sbjct: 829 LGRVFVEFGIEIQTAKIQTLGERVEDLFFIT-DAQQNPITDPDLCQQIE 876
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P R + ++ ++++V S ++ G L L +V + + I+ A I + GE D+F +
Sbjct: 799 PTRAQITQDHDKGLSILEVISPDRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFI 858
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD N +++ D+ ++I+ ++
Sbjct: 859 TDAQQNPITDPDLCQQIEAAI 879
>gi|50119969|ref|YP_049136.1| PII uridylyl-transferase [Pectobacterium atrosepticum SCRI1043]
gi|81170615|sp|Q6D8E5.1|GLND_ERWCT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|49610495|emb|CAG73940.1| [protein-PII] uridylyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 904
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV + +G T + + PDRP LF AV D + + H I S + A
Sbjct: 704 NKPLVLISHQASRGGTEIFIWSPDRP-YLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 762
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS-------------- 339
+ + DG+P++ + + + + LE A+ RRTS +
Sbjct: 763 FIVLEPDGSPLAQD-RHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNFLPTH 821
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
+EL D+ GLL+ + IF + LS+ A ++T G + ++F + D+ +K
Sbjct: 822 TDRRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFILADSDRRALKP 881
Query: 394 E 394
E
Sbjct: 882 E 882
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDV 79
N P V + + ++R T I + S ++ + L+ +L + A I S DG MD
Sbjct: 704 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM-AMDT 762
Query: 80 FHVTDQNGNKLSEDD---VSERIQQSL------GPRAR----SFRSLRRSVGVQAALEHT 126
F V + +G+ L++D + ++Q+L PR R R V HT
Sbjct: 763 FIVLEPDGSPLAQDRHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNFLPTHT 822
Query: 127 ----TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
+EL+ D+PGLL+ + + SDL ++ GA + T R+ + +
Sbjct: 823 DRRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFIL 871
>gi|118579771|ref|YP_901021.1| UTP-GlnB uridylyltransferase GlnD [Pelobacter propionicus DSM 2379]
gi|118502481|gb|ABK98963.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
Length = 905
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPDTLAKIKRL 192
D PGL S + V++ N++GA++ T N ++ ++ + S G I D + K++
Sbjct: 726 DMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQVNS-PRGKIIGDENCWKKVRDD 784
Query: 193 LLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVE 252
VL G+ A+ A VD K +R Q+M + R + +
Sbjct: 785 TERVLLGE-----ADVAAMVD---KRQRPSQLMV-------------RPAPRFPTRIDFD 823
Query: 253 SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNP 312
+ +GYTV+++ D+ LL+ TLT + + + + + + +Y+R + G+
Sbjct: 824 NQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIFGHK 883
Query: 313 ISSEAERQRVINCLEAAI 330
I EA+ + V L++AI
Sbjct: 884 IMDEAKLESVRERLKSAI 901
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 333 RTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+ SEG + +++ D+ GLL +T + GL + ++++T+ Q +VFYV D G+ +
Sbjct: 825 QVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIFGHKI 884
Query: 392 KSET-IESVRKEI 403
E +ESVR+ +
Sbjct: 885 MDEAKLESVRERL 897
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P R+ DN + T+I + + +K G L + L L L I + IS+ + DVF+V
Sbjct: 817 PTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYV 876
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G+K+ ++ E +++ L
Sbjct: 877 RDIFGHKIMDEAKLESVRERL 897
>gi|408483321|ref|ZP_11189540.1| PII uridylyl-transferase [Pseudomonas sp. R81]
Length = 356
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 145 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 204
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 205 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFAPQVTISN 264
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 265 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 324
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 12 DEFEKLVLRMNP---------PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
DE+ ++ R P P+VT+ N + R T++++ + ++ G L + + + DL
Sbjct: 237 DEYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 296
Query: 63 IIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
++ A I++ GE DVF +TD + LS+ ++ R+Q+++
Sbjct: 297 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQEAI 337
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 145 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 204
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D +G+ + + D+ IQ+ + + + F + + ++
Sbjct: 205 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFAPQVTISN 264
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 265 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 323
Query: 180 IDDPDTLAKIKRLLLYVL 197
+ DP+ +++ ++ L
Sbjct: 324 LSDPELCLRLQEAIVQQL 341
>gi|312959390|ref|ZP_07773907.1| uridylyltransferase [Pseudomonas fluorescens WH6]
gi|311286107|gb|EFQ64671.1| uridylyltransferase [Pseudomonas fluorescens WH6]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A VI S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP + R+ + L I+RR +
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q+++
Sbjct: 862 DADNQPLSDPELCLRLQEAI 881
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D G + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 867
Query: 180 IDDPDTLAKIKRLLLYVL 197
+ DP+ +++ ++ L
Sbjct: 868 LSDPELCLRLQEAIVQQL 885
>gi|398881660|ref|ZP_10636645.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
gi|398200795|gb|EJM87697.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
Length = 216
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 5 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 64
Query: 303 YYIRHVDGNPISSEAERQRVI--NCLEA---------AIKRRTSEGIS------------ 339
Y + DG+ I R + I EA I+RR +
Sbjct: 65 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 124
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ P+
Sbjct: 125 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 184
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 118 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 177
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N LS+ + R+Q ++
Sbjct: 178 DANNQPLSDPLLCSRLQDAI 197
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 23 PPRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMD 78
PP V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 4 PPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLD 63
Query: 79 VFHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGV 119
+ V D +G+ + + DD IQ+ + PR + V +
Sbjct: 64 TYIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTI 122
Query: 120 Q--AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 123 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT-DANN 181
Query: 178 LPIDDP 183
P+ DP
Sbjct: 182 QPLSDP 187
>gi|333928811|ref|YP_004502390.1| UTP-GlnB uridylyltransferase, GlnD [Serratia sp. AS12]
gi|333933764|ref|YP_004507342.1| UTP-GlnB uridylyltransferase, GlnD [Serratia plymuthica AS9]
gi|386330634|ref|YP_006026804.1| UTP-GlnB uridylyltransferase, GlnD [Serratia sp. AS13]
gi|333475371|gb|AEF47081.1| UTP-GlnB uridylyltransferase, GlnD [Serratia plymuthica AS9]
gi|333492871|gb|AEF52033.1| UTP-GlnB uridylyltransferase, GlnD [Serratia sp. AS12]
gi|333962967|gb|AEG29740.1| UTP-GlnB uridylyltransferase, GlnD [Serratia sp. AS13]
Length = 892
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A A +KPLV V +G T + + PDRP LF AV D + + H I
Sbjct: 685 HARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRP-YLFAAVAGEMDRRNLSVHDAQIF 743
Query: 295 ESPE--AYQEYYIRHVDGNPISS-----------------EAERQRV------------- 322
+ + A + + DG+P++ E + RV
Sbjct: 744 TNRDGMAMDTFIVLEPDGSPLAQDRHTAIRHALVQTITLREYQPPRVRRPSSKLRHFSVP 803
Query: 323 --INCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNV 380
+N L RR+ LEL D+ GLL+ V +F + GLS+ A ++T G + ++
Sbjct: 804 TEVNFLPTHTDRRSY----LELTALDQPGLLARVGEVFADLGLSLHGARISTIGERVEDL 859
Query: 381 FYVVDASGNPVKSET 395
F + D+ + SET
Sbjct: 860 FILADSDRRALNSET 874
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ + ++ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPYLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSED---DVSERIQQSL------GPRARSFRSLRRSVGVQAALE----HT--- 126
+ +G+ L++D + + Q++ PR R S R V + HT
Sbjct: 757 LEPDGSPLAQDRHTAIRHALVQTITLREYQPPRVRRPSSKLRHFSVPTEVNFLPTHTDRR 816
Query: 127 -TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
+ELT D+PGLL+ V V +DL ++ GA + T R+ + +
Sbjct: 817 SYLELTALDQPGLLARVGEVFADLGLSLHGARISTIGERVEDLFILA 863
>gi|326403121|ref|YP_004283202.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
gi|325049982|dbj|BAJ80320.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
Length = 938
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSEDD----VSERIQQSLGPRARSFRSLRRS----- 116
R + +DG +D F + D G L +S I+Q L R R + ++
Sbjct: 775 RIHTLTDGM-ALDTFWIQDAGGGSLEAPHRLAKISAVIEQVLSGRLRLATEIEKAANSVV 833
Query: 117 --------------VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
V A+ HT IE+ GRDRPGLL +V A ++ + A + T+
Sbjct: 834 GGRMRAIHVPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYG 893
Query: 163 SRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKG 199
R V Y+ + GL + + LA+++ L+ L G
Sbjct: 894 VRAVDVFYV-KDVFGLKVQNERKLAQLRSALIEALAG 929
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL DVT GL + A +TT G +AV+VFYV D G V++E
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFGLKVQNE 913
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDN+++ + T+I+V+ ++ G L ++ + L I A+I++ G +DVF+V
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ + +++ +L
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 31/208 (14%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D GL S + L+ ++ A + T MA + +A G ++ P LAKI ++
Sbjct: 752 DHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGSLEAPHRLAKISAVI 811
Query: 194 LYVLKG-----DRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL 248
VL G +++AN+ V + R +H P
Sbjct: 812 EQVLSGRLRLATEIEKAANSVVG----GRMRAIH----------------------VPPR 845
Query: 249 VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHV 308
V V++ +TV+ + DRP LL D +T + A + A +Y++ V
Sbjct: 846 VVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDV 905
Query: 309 DGNPISSEAERQRVINCLEAAIKRRTSE 336
G + +E + ++ + L A+ R E
Sbjct: 906 FGLKVQNERKLAQLRSALIEALAGRPHE 933
>gi|4520376|dbj|BAA75913.1| uridylyl transferase [Pseudomonas aeruginosa]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ + R+ ++++V + ++ G L + + D DL ++ A I++ GE DVF++T
Sbjct: 802 PQVTISTDAVRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D L++ D+ +R+Q +L
Sbjct: 862 DARNQPLADPDLCKRLQAAL 881
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
+ +E+ DRPGLL+ + + D +V A++ T R+ V YIT +A P+ DPD
Sbjct: 815 SVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYIT-DARNQPLADPDL 873
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVS 211
+++ L+ L D + + T ++
Sbjct: 874 CKRLQAALVEQLSQDNGRDTLPTRIN 899
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ + IF + LSV A++ T G + +VFY+ DA P+
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPL 868
>gi|28899094|ref|NP_798699.1| PII uridylyl-transferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361365|ref|ZP_05774430.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
gi|260876824|ref|ZP_05889179.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895882|ref|ZP_05904378.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260900384|ref|ZP_05908779.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|32363168|sp|Q87MD6.1|GLND_VIBPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28807318|dbj|BAC60583.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308089359|gb|EFO39054.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308091507|gb|EFO41202.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108580|gb|EFO46120.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308113668|gb|EFO51208.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
Length = 874
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM N P V + + R T + V + ++ +V L+ + + A I S D
Sbjct: 670 LLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL----GPRARSFRSLRRSVGVQ-------- 120
G +D F V DQ+G + E + I+ R ++ R +Q
Sbjct: 730 GH-VIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+HT +E D PGLL++V +DL N+ GA++ T R + +TSEA
Sbjct: 789 DFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
+KPLV + +G T V + D+P L V L + V+
Sbjct: 677 NKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKDGHVIDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA--------IKRRTS 335
H I ES A ++ HV ++ + +R N L+ + +
Sbjct: 737 MVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKGK 796
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+ +E D GLL+ V R F + +++ A++TT G +A ++F + +G + E
Sbjct: 797 KHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEAGGRLSEEQ 856
Query: 396 IESVRKEI 403
+R ++
Sbjct: 857 QNELRDKL 864
>gi|433658394|ref|YP_007275773.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
gi|432509082|gb|AGB10599.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
Length = 874
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM N P V + + R T + V + ++ +V L+ + + A I S D
Sbjct: 670 LLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL----GPRARSFRSLRRSVGVQ-------- 120
G +D F V DQ+G + E + I+ R ++ R +Q
Sbjct: 730 GH-VIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+HT +E D PGLL++V +DL N+ GA++ T R + +TSEA
Sbjct: 789 DFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
+KPLV + +G T V + D+P L V L + V+
Sbjct: 677 NKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKDGHVIDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA--------IKRRTS 335
H I ES A ++ HV ++ + +R N L+ + +
Sbjct: 737 MVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKGK 796
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+ +E D GLL+ V R F + +++ A++TT G +A ++F + +G + E
Sbjct: 797 KHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEAGGRLSEEQ 856
Query: 396 IESVRKEI 403
+R ++
Sbjct: 857 QNELRDKL 864
>gi|421785183|ref|ZP_16221615.1| protein-P-II uridylyltransferase [Serratia plymuthica A30]
gi|407752598|gb|EKF62749.1| protein-P-II uridylyltransferase [Serratia plymuthica A30]
Length = 892
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A A +KPLV V +G T + + PDRP LF AV D + + H I
Sbjct: 685 HARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRP-YLFAAVAGEMDRRNLSVHDAQIF 743
Query: 295 ESPE--AYQEYYIRHVDGNPISS-----------------EAERQRV------------- 322
+ + A + + DG+P++ E + RV
Sbjct: 744 TNRDGMAMDTFIVLEPDGSPLAQDRHTAIRHALVQTITQREYQPPRVRRPSSKLRHFSVP 803
Query: 323 --INCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNV 380
+N L RR+ LEL D+ GLL+ V +F + GLS+ A ++T G + ++
Sbjct: 804 TEVNFLPTHTDRRSY----LELTALDQPGLLARVGEVFADLGLSLHGARISTIGERVEDL 859
Query: 381 FYVVDASGNPVKSET 395
F + D+ + SET
Sbjct: 860 FILADSDRRALNSET 874
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ + ++ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPYLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSED-----------DVSERIQQSLGPRARSFRSLRRSVGVQAALE----HT- 126
+ +G+ L++D +++R Q PR R S R V + HT
Sbjct: 757 LEPDGSPLAQDRHTAIRHALVQTITQREYQP--PRVRRPSSKLRHFSVPTEVNFLPTHTD 814
Query: 127 ---TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
+ELT D+PGLL+ V V +DL ++ GA + T R+ + +
Sbjct: 815 RRSYLELTALDQPGLLARVGEVFADLGLSLHGARISTIGERVEDLFILA 863
>gi|345430299|ref|YP_004823420.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
gi|301156363|emb|CBW15834.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
Length = 861
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 38/180 (21%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYIR 306
LV + + G T + + CPD+ L V T+ ++ ++ A ++ ++ + + I
Sbjct: 674 LVKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIIT 733
Query: 307 HVDGNPISSEAERQRVINCLEAAI--------------------------------KRRT 334
++G + SE R+ LEA + K
Sbjct: 734 ELNGELVRSERRRE-----LEAVLTSVLLGEKLPSVSFANNRQLQHFTVKTDVRFLKETK 788
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
E LE+ D+ GLL+ +++IF E L++ A++TT G +A + F + + G + E
Sbjct: 789 KEHTELEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKGTALTEE 848
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
EHT +E+ D+PGLL+++ + ++LK N+ A++ T + +T+E
Sbjct: 790 EHTELEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNE 840
>gi|270264822|ref|ZP_06193086.1| uridylyltransferase [Serratia odorifera 4Rx13]
gi|270041120|gb|EFA14220.1| uridylyltransferase [Serratia odorifera 4Rx13]
Length = 892
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A A +KPLV V +G T + + PDRP LF AV D + + H I
Sbjct: 685 HARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRP-YLFAAVAGEMDRRNLSVHDAQIF 743
Query: 295 ESPE--AYQEYYIRHVDGNPISS-----------------EAERQRV------------- 322
+ + A + + DG+P++ E + RV
Sbjct: 744 TNRDGMAMDTFIVLEPDGSPLAQDRHTAIRHALVQTITQREYQPPRVRRPSSKLRHFSVP 803
Query: 323 --INCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNV 380
+N L RR+ LEL D+ GLL+ V +F + GLS+ A ++T G + ++
Sbjct: 804 TEVNFLPTHTDRRSY----LELTALDQPGLLARVGEVFADLGLSLHGARISTIGERVEDL 859
Query: 381 FYVVDASGNPVKSET 395
F + D+ + SET
Sbjct: 860 FILADSDRRALNSET 874
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ + ++ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPYLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSED-----------DVSERIQQSLGPRARSFRSLRRSVGVQAALE----HT- 126
+ +G+ L++D +++R Q PR R S R V + HT
Sbjct: 757 LEPDGSPLAQDRHTAIRHALVQTITQREYQP--PRVRRPSSKLRHFSVPTEVNFLPTHTD 814
Query: 127 ---TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
+ELT D+PGLL+ V V +DL ++ GA + T R+ + +
Sbjct: 815 RRSYLELTALDQPGLLARVGEVFADLGLSLHGARISTIGERVEDLFILA 863
>gi|83945035|ref|ZP_00957401.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
gi|83851817|gb|EAP89672.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
Length = 938
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 28/199 (14%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLN--DLDLIIRRAYISSDGEWFMDVFHVT 83
V V R AT + V + ++ ++ L+ +++ + +SDG F DVF+V
Sbjct: 720 VGVRTDKRRSATEVMVLTPDRHALFADIAGALSREGANVVGAQVTTTSDGRAF-DVFYVQ 778
Query: 84 DQNGNKLSEDD--VSERIQQSLGPRARS----------FRSLRR-----------SVGVQ 120
+Q G D + +R++ ++ A + LRR ++ ++
Sbjct: 779 EQGGKPFGWSDSYIQDRLRDAVQSAAEHGLSSKDARPMLKPLRRREAAFTVTPSVNLDLE 838
Query: 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
A+ + IE TGRDRPGLL + LSD+ ++ A + + R Y+T E P
Sbjct: 839 ASDDALVIEATGRDRPGLLHALAKTLSDIGLSLEAARIDGYGERAVDTFYVT-ENGHKPS 897
Query: 181 DDPDTLAKIKRLLLYVLKG 199
D LA IK L+ VL G
Sbjct: 898 GDA-RLAGIKVHLMNVLAG 915
>gi|302522151|ref|ZP_07274493.1| LOW QUALITY PROTEIN: protein-P-II uridylyltransferase [Streptomyces
sp. SPB78]
gi|302431046|gb|EFL02862.1| LOW QUALITY PROTEIN: protein-P-II uridylyltransferase [Streptomyces
sp. SPB78]
Length = 685
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
L + PPRV V ++ AT+I+V + + G L L Q L + + +R A+ S+ G +D
Sbjct: 597 LSVPPPRVRVAPAASHSATVIEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVD 656
Query: 79 VFHVTDQNGNKLSED---DVSERIQQSLG 104
F+VT +G L+ D ++ ++++LG
Sbjct: 657 AFYVTGPDGGPLAPDVASALAAELERTLG 685
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + + G+ V A +T G+ AV+ FYV G P+ + ++
Sbjct: 617 IEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVDAFYVTGPDGGPLAPDVASAL 676
Query: 400 RKEIGLTI 407
E+ T+
Sbjct: 677 AAELERTL 684
>gi|417319179|ref|ZP_12105737.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
gi|328474369|gb|EGF45174.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
Length = 874
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 18 VLRM---NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSD 72
+LRM N P V + + R T + V + ++ +V L+ + + A I S D
Sbjct: 670 LLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 73 GEWFMDVFHVTDQNGNKLSEDDVSERIQQSL----GPRARSFRSLRRSVGVQ-------- 120
G +D F V DQ+G + E + I+ R ++ R +Q
Sbjct: 730 GH-VIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKV 788
Query: 121 -----AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+HT +E D PGLL++V +DL N+ GA++ T R + +TSEA
Sbjct: 789 DFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEA 848
Query: 176 TG 177
G
Sbjct: 849 GG 850
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
+KPLV + +G T V + D+P L V L + V+
Sbjct: 677 NKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKDGHVIDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA--------IKRRTS 335
H I ES A ++ HV ++ + +R N L+ + +
Sbjct: 737 MVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKGK 796
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+ +E D GLL+ V R F + +++ A++TT G +A ++F + +G + E
Sbjct: 797 KHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEAGGRLSEEQ 856
Query: 396 IESVRKEI 403
+R ++
Sbjct: 857 QNELRDKL 864
>gi|297202641|ref|ZP_06920038.1| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
gi|297148159|gb|EDY57250.2| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
Length = 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P RVTV ++R AT+I+V + + G L + + L D + +R A++S+ G +D F+V
Sbjct: 207 PARVTVAGAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRMRSAHVSTLGANAVDAFYV 266
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
TD G L + V+ +++++L
Sbjct: 267 TDGKGAPLGAGEAASVARKLEETL 290
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + G+ + A V+T G+ AV+ FYV D G P+ + SV
Sbjct: 223 IEVRAQDAPGLLFRIGRALEDAGVRMRSAHVSTLGANAVDAFYVTDGKGAPLGAGEAASV 282
Query: 400 RKEI 403
+++
Sbjct: 283 ARKL 286
>gi|163797114|ref|ZP_02191069.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
gi|159177630|gb|EDP62183.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
Length = 945
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+++V+ ++ G L + + L + + I A IS+ GE F+DVF++
Sbjct: 852 PPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVFYL 911
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ E I+++L
Sbjct: 912 KDVFGLKVDSKSKLEDIRRAL 932
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 96/226 (42%), Gaps = 36/226 (15%)
Query: 119 VQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
+ AA T + + D PGL S + ++ NV+ A ++T ++ MA ++ + L
Sbjct: 747 IDAARAVTEVTVYATDHPGLFSRISGAMAATGANVVDARIFTLSNGMALDTFLIQDEDRL 806
Query: 179 PIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAES 238
D PD +AK+ + +R+ + A+ VD + R+
Sbjct: 807 AFDRPDRIAKLVSAI---------ERALSGALRVDKALEARK------------------ 839
Query: 239 GSASGRSK-----PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI 293
+ GR++ P V +++ +TVV + D P +L+ L + ++ A++
Sbjct: 840 PTLGGRTRALKIPPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASIS 899
Query: 294 AESPEAYQEYYIRHVDGNPISSEAE----RQRVINCLEAAIKRRTS 335
+Y++ V G + S+++ R+ ++ L AA ++ +
Sbjct: 900 TYGERFVDVFYLKDVFGLKVDSKSKLEDIRRALMKALGAAEAKKAA 945
>gi|329123179|ref|ZP_08251748.1| protein-P-II uridylyltransferase [Haemophilus aegyptius ATCC 11116]
gi|327471524|gb|EGF16968.1| protein-P-II uridylyltransferase [Haemophilus aegyptius ATCC 11116]
Length = 863
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ ++ E
Sbjct: 735 ELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+AGLL+ V++IF E L++ A++TT G +A + F + + G + E E +
Sbjct: 795 MELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALAREERERL 854
Query: 400 RKEI 403
+ I
Sbjct: 855 NRVI 858
>gi|357446731|ref|XP_003593641.1| Phosphorylase [Medicago truncatula]
gi|355482689|gb|AES63892.1| Phosphorylase [Medicago truncatula]
Length = 1055
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 28 VDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNG 87
V+N+++ +T + + NK G L + +V L L I +A + +G++F F VTD +G
Sbjct: 53 VENSTSDNSTAFLIRARNKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHG 112
Query: 88 NKLSEDDVSERIQQSL 103
NK+ +D+ ERI+++L
Sbjct: 113 NKIEDDENLERIKRAL 128
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK-SETIESVRKEI 403
++ GLL +TR+F+ GL++ +A V G F+V D+ GN ++ E +E +++ +
Sbjct: 70 NKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHGNKIEDDENLERIKRAL 128
>gi|163757730|ref|ZP_02164819.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
gi|162285232|gb|EDQ35514.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
Length = 953
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + K T+I+++ ++ G L E+ VL+DL L I A+I++ GE +D F+V
Sbjct: 834 PQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 84 DQNGNKLSEDD 94
D G K++ ++
Sbjct: 894 DLVGMKITNEN 904
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIES- 398
+EL C DR GLLS++T + + L + A +TT G + V+ FYV D G + +E ++
Sbjct: 849 IELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRDLVGMKITNENRQTN 908
Query: 399 VRKEIGLTILRVKDDAYSKSPP 420
+ + + + D+ + PP
Sbjct: 909 IVARLKAVLAKEDDELRDQMPP 930
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+P VT+ + +TV+ L C DRP LL + L+D+ + A + + +Y+
Sbjct: 833 RPQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYV 892
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
R + G I++E + ++ L+A + + E
Sbjct: 893 RDLVGMKITNENRQTNIVARLKAVLAKEDDE 923
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 100 QQSLGPRARSFRSLRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAE 157
+++ G R ++R V + AL + T IEL DRPGLLSE+ +VLSDL ++ A
Sbjct: 819 RKNRGKRKTKPFTVRPQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAH 878
Query: 158 VWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDK 203
+ T ++ Y+ + G+ I + + I L VL + D+
Sbjct: 879 ITTFGEKVVDTFYV-RDLVGMKITNENRQTNIVARLKAVLAKEDDE 923
>gi|383816413|ref|ZP_09971811.1| PII uridylyl-transferase [Serratia sp. M24T3]
gi|383294718|gb|EIC83054.1| PII uridylyl-transferase [Serratia sp. M24T3]
Length = 898
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + PD+P LF AV D + + H I + + A
Sbjct: 702 TKPLVLVSHQATRGGTEIFIWSPDKP-YLFAAVAGELDRRNLSIHDAQIFTNRDGMAMDT 760
Query: 303 YYIRHVDGNPISSE-------AERQRVINCLEAAIKRRTSEGIS---------------- 339
+ + DGNP++ + A Q ++ + RR S +
Sbjct: 761 FIVLEPDGNPLTQDRHETTRFALEQAMLQAYQPPRARRPSPKLRNFSVPTEVSFLPTHTD 820
Query: 340 ----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+EL D+ GLL+ V +F + GLS+ A ++T G + ++F + ++ + +T
Sbjct: 821 RKTYMELIALDQPGLLARVGEVFSDLGLSLHGARISTIGERVEDLFILANSDRRALDKQT 880
Query: 396 IESVRKEI 403
+++ +
Sbjct: 881 RREIQRRL 888
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + + R T I + S +K + L+ +L I A I ++ + MD F V
Sbjct: 704 PLVLVSHQATRGGTEIFIWSPDKPYLFAAVAGELDRRNLSIHDAQIFTNRDGMAMDTFIV 763
Query: 83 TDQNGNKLSEDDV--------SERIQQSLGPRARSFRSLRRSVGVQAALEH--------T 126
+ +GN L++D +Q PRAR R+ V + T
Sbjct: 764 LEPDGNPLTQDRHETTRFALEQAMLQAYQPPRARRPSPKLRNFSVPTEVSFLPTHTDRKT 823
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASV-VYITSEATGLPIDDPDT 185
+EL D+PGLL+ V V SDL ++ GA + T R+ + + S+ L D T
Sbjct: 824 YMELIALDQPGLLARVGEVFSDLGLSLHGARISTIGERVEDLFILANSDRRAL---DKQT 880
Query: 186 LAKIKRLLLYVL 197
+I+R L VL
Sbjct: 881 RREIQRRLTEVL 892
>gi|319776024|ref|YP_004138512.1| uridylyltransferase [Haemophilus influenzae F3047]
gi|317450615|emb|CBY86834.1| uridylyltransferase [Haemophilus influenzae F3047]
Length = 863
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ ++ E
Sbjct: 735 ELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+AGLL+ V++IF E L++ A++TT G +A + F + + G + E E +
Sbjct: 795 MELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALAREERERL 854
Query: 400 RKEI 403
+ I
Sbjct: 855 NRVI 858
>gi|417844045|ref|ZP_12490108.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
gi|341947997|gb|EGT74636.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
Length = 863
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGSKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAERQ-----------RVINCLEAAIKRRTS----------------EGIS 339
++G + + R+ + L A R+ E
Sbjct: 735 ELNGELVEFDRRRELEQALTVALQSEKLPALSIAPNRQLQHFTVQTDVRFLHENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL----- 123
I++ + D F +T+ NG +L E D ++Q+L +S + S+ L
Sbjct: 720 ITTQDGYVFDSFIITELNG-ELVEFDRRRELEQALTVALQSEKLPALSIAPNRQLQHFTV 778
Query: 124 ------------EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
EHT +EL D+PGLL++V + S+L N++ A++ T + A +I
Sbjct: 779 QTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK-AEDFFI 837
Query: 172 TSEATGLPID 181
+ G +D
Sbjct: 838 LTNQFGQALD 847
>gi|145633652|ref|ZP_01789379.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229845252|ref|ZP_04465385.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
gi|144985529|gb|EDJ92345.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229811847|gb|EEP47543.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
Length = 863
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 32/183 (17%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS-------------------------- 339
++G + E +R+R + L A++ + +S
Sbjct: 735 ELNGELV--EFDRRRELEQALTVALQSKKLPALSITPNRQLQHFTVQTDVRFLHENKKEH 792
Query: 340 --LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E
Sbjct: 793 TEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQRE 852
Query: 398 SVR 400
+R
Sbjct: 853 ILR 855
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL----- 123
I++ + D F +T+ NG +L E D ++Q+L +S + S+ L
Sbjct: 720 ITTQDGYVFDSFIITELNG-ELVEFDRRRELEQALTVALQSKKLPALSITPNRQLQHFTV 778
Query: 124 ------------EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
EHT +EL D+PGLL++V + ++L N++ A++ T + A +I
Sbjct: 779 QTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK-AEDFFI 837
Query: 172 TSEATGLPID 181
+ G +D
Sbjct: 838 LTNQFGQALD 847
>gi|240949654|ref|ZP_04753989.1| PII uridylyl-transferase [Actinobacillus minor NM305]
gi|240295912|gb|EER46588.1| PII uridylyl-transferase [Actinobacillus minor NM305]
Length = 862
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 17 LVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEW 75
L+ + N P V V N R AT I + ++ + Q L+ + I A I+S+
Sbjct: 664 LLKQQNLPLVLVGNEYARGATEIFIHCEDQNQLFARIAQELSQKKISIHDAQIITSENGL 723
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQS-----LGPRARSFRSLRRSVGVQ---------- 120
D F VT+ NG L+E E+IQQS L P +++F+++++ + Q
Sbjct: 724 VYDSFIVTESNGQALNEIRC-EQIQQSLIKVLLDPASKTFKAIKKPIKHQTFKRKTKVRF 782
Query: 121 ---AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
+ T EL DR GLL+++ + + L+ ++ A++ T R+ +++
Sbjct: 783 LANSPPNQTAFELFTLDREGLLAQLSHIFNQLELVLINAKITTIGERVEDFFVVST 838
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYI 305
PLV V + +G T + + C D+ +L L+ + ++ A +I +E+ Y + +
Sbjct: 671 PLVLVGNEYARGATEIFIHCEDQNQLFARIAQELSQKKISIHDAQIITSENGLVYDSFIV 730
Query: 306 RHVDG---NPISSEAERQRVINCL----------------EAAIKRRTS---------EG 337
+G N I E +Q +I L KR+T
Sbjct: 731 TESNGQALNEIRCEQIQQSLIKVLLDPASKTFKAIKKPIKHQTFKRKTKVRFLANSPPNQ 790
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+ EL DR GLL+ ++ IF + L + A++TT G + + F V S + E
Sbjct: 791 TAFELFTLDREGLLAQLSHIFNQLELVLINAKITTIGERVEDFFVVSTLSHEALSEEQQH 850
Query: 398 SVRKEI 403
+++ I
Sbjct: 851 QLKQHI 856
>gi|440737197|ref|ZP_20916770.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
gi|440382379|gb|ELQ18883.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
Length = 897
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A VI S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP + R + + L I+RR +
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q ++
Sbjct: 862 DADNQPLSDPELCRRLQAAI 881
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D G + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP+ +++
Sbjct: 868 LSDPELCRRLQ 878
>gi|374299916|ref|YP_005051555.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio africanus str.
Walvis Bay]
gi|332552852|gb|EGJ49896.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio africanus str.
Walvis Bay]
Length = 940
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V VDN ++ T+++V +A++ G L EL L+ L L + A I + GE D+F V
Sbjct: 856 PEVRVDNEASDFYTVLEVRAADRPGRLYELAMALDRLGLSVFLAKIDTMGERVADIFFVR 915
Query: 84 DQNGNKLSEDDVSERIQ 100
D G KL D E +Q
Sbjct: 916 DGEGQKLDPDRADEVMQ 932
>gi|447915634|ref|YP_007396202.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
gi|445199497|gb|AGE24706.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
Length = 897
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A VI S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP + R + + L I+RR +
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ ++ R+Q ++
Sbjct: 862 DADNQPLSDPELCRRLQAAI 881
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFR-SLRRSVGV 119
+ V D G + + DD IQ+ + + + F + + ++
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +EL+ DRPGLL+ + + + ++ A++ T R+ V +IT +A P
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP+ +++
Sbjct: 868 LSDPELCRRLQ 878
>gi|411004885|ref|ZP_11381214.1| PII uridylyl-transferase [Streptomyces globisporus C-1027]
Length = 819
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
++ PPRVTV +R+AT+I+V + + G L + L + +R A++S+ G +D
Sbjct: 731 VKAPPPRVTVAAAGSRRATVIEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVD 790
Query: 79 VFHVTDQNGNKLSE---DDVSERIQQSLG 104
F+VT +G L+ +V++ ++++LG
Sbjct: 791 AFYVTGTDGEPLTPARASEVAQEVEKALG 819
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV----KSET 395
+E+ +D GLL + + + V A V+T G+ AV+ FYV G P+ SE
Sbjct: 751 IEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVDAFYVTGTDGEPLTPARASEV 810
Query: 396 IESVRKEIG 404
+ V K +G
Sbjct: 811 AQEVEKALG 819
>gi|159045373|ref|YP_001534167.1| PII uridylyl-transferase [Dinoroseobacter shibae DFL 12]
gi|157913133|gb|ABV94566.1| [Protein-PII] uridylyltransferase [Dinoroseobacter shibae DFL 12]
Length = 943
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 24/206 (11%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T + D PG+ + + L+ + NV+ A +T + + +A G P D+
Sbjct: 754 TRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYVTACFWVQDADGKPYDE-SR 812
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L ++++++ L G+ ++ VS D K RD + S
Sbjct: 813 LPRLRKMIDKTLSGE--VVTSQALVSKDKVKK-----------RDAQFRFPTS------- 852
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
++ ++ + YT++ + DRP LLFD L D V A + + +Y+
Sbjct: 853 ---ISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYV 909
Query: 306 RHVDGNPISSEAERQRVINCLEAAIK 331
+ + G + EA+++ + L A++
Sbjct: 910 KDMFGLKLHGEAKQRTIEKRLREAVE 935
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P ++ DN + TLI+VD+ ++ G L +L + L D ++ + A I++ G +D F+V
Sbjct: 850 PTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYV 909
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G KL + I++ L
Sbjct: 910 KDMFGLKLHGEAKQRTIEKRL 930
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLL D+ + + + V A++ T G+Q V+ FYV D G K T
Sbjct: 866 IEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYVKDMFGLKLHGEAKQRT 925
Query: 396 IESVRKE 402
IE +E
Sbjct: 926 IEKRLRE 932
>gi|357410930|ref|YP_004922666.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces flavogriseus ATCC
33331]
gi|320008299|gb|ADW03149.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces flavogriseus ATCC
33331]
Length = 810
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
++ PPRVTV +R AT+I+V + + G L + L + +R A++S+ G +D
Sbjct: 722 VKAPPPRVTVAAAGSRLATVIEVRAQDAPGLLHRIGHALEQSAVRVRSAHVSTLGANAVD 781
Query: 79 VFHVTDQNGNKLSED---DVSERIQQSLG 104
F+VTD +G L+ + V+ +++ LG
Sbjct: 782 AFYVTDPDGEPLAPEQAAQVAREVERELG 810
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + ++ + V A V+T G+ AV+ FYV D G P+ E V
Sbjct: 742 IEVRAQDAPGLLHRIGHALEQSAVRVRSAHVSTLGANAVDAFYVTDPDGEPLAPEQAAQV 801
Query: 400 RKEI 403
+E+
Sbjct: 802 AREV 805
>gi|83594868|ref|YP_428620.1| PII uridylyl-transferase [Rhodospirillum rubrum ATCC 11170]
gi|386351633|ref|YP_006049881.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
gi|91206753|sp|Q2RNG2.1|GLND_RHORT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|83577782|gb|ABC24333.1| GlnB (protein PII) uridylyltransferase, GlnD [Rhodospirillum rubrum
ATCC 11170]
gi|346720069|gb|AEO50084.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
Length = 936
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 81/208 (38%), Gaps = 26/208 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S++ ++ N++ A++ T + A ++ G I+ + +A++ + +
Sbjct: 735 DHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDIFTVQTLEGHAIEKEERIARLAKTV 794
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
VL GD A + R L P V V++
Sbjct: 795 RDVLTGDLPLEKALRRQPPRLPERTRHL----------------------TVPPRVIVDN 832
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
K +TV+ + DRP L+ LTD+ + A V +Y++ V G I
Sbjct: 833 QASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVKDVFGMKI 892
Query: 314 SSEAERQRVINCLEAAI----KRRTSEG 337
A+ ++ LEAAI R+ EG
Sbjct: 893 VHRAKLAQIREALEAAITQTVPRKVEEG 920
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV VDN +++ T+I+++ ++ G L + + L D+ + I A +S+ GE +D F+V
Sbjct: 825 PPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYV 884
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K+ +I+++L
Sbjct: 885 KDVFGMKIVHRAKLAQIREAL 905
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
QA+ HT IE+ GRDRPG L V L+D+ + A V T+ R+ Y+ + G+
Sbjct: 833 QASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYV-KDVFGMK 891
Query: 180 IDDPDTLAKIKRLL 193
I LA+I+ L
Sbjct: 892 IVHRAKLAQIREAL 905
>gi|409393661|ref|ZP_11244961.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409393804|ref|ZP_11245087.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121642|gb|EKM97708.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121803|gb|EKM97865.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
Length = 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-----QRVINCLE------AAIKRRTSEGIS------------ 339
Y + DG PI ER Q +I+ + I+R +
Sbjct: 749 YIVLDADGTPIGDNRERIEEIRQGLIDAVRNPDEYLTIIQRHVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+E+ DR GLL+ V ++F LSV A++ T G + +VF+V +A P+
Sbjct: 809 DTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTNADNQPL 868
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T+I++ + ++ G L + Q+ DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSE 92
T+ + LS+
Sbjct: 861 TNADNQPLSD 870
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 29/188 (15%)
Query: 22 NPPRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFM 77
N P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +
Sbjct: 687 NGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTL 746
Query: 78 DVFHVTDQNGNKLSED-DVSERIQQSLGPRARS----FRSLRRSVGVQAALEH------- 125
D + V D +G + ++ + E I+Q L R+ ++R V Q L+H
Sbjct: 747 DTYIVLDADGTPIGDNRERIEEIRQGLIDAVRNPDEYLTIIQRHVPRQ--LKHFAFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T IE+ DRPGLL+ V + +V A++ T R+ V ++T+ A
Sbjct: 805 TIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTN-A 863
Query: 176 TGLPIDDP 183
P+ DP
Sbjct: 864 DNQPLSDP 871
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 26/190 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI +A G PI D+ +
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGTPIGDNRE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I++ L+ + R+ + +++ H R+L +
Sbjct: 765 RIEEIRQGLIDAV------RNPDEYLTIIQRHVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPIS 314
+ + D P+S
Sbjct: 860 VTNADNQPLS 869
>gi|418055379|ref|ZP_12693434.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
gi|353210961|gb|EHB76362.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
Length = 932
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + + T+I+V ++ G L EL VL+DL L I A++++ GE +DVF+VT
Sbjct: 834 PEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARS 109
D G ++ +SE Q+++ R +S
Sbjct: 894 DLVGKQI----LSEVRQRAIRDRLQS 915
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T IE++GRDRPGLL E+ +VLSDL ++ A V T + V Y+T
Sbjct: 847 TVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL ++T + + L + A VTT G +AV+VFYV D G + SE
Sbjct: 849 IEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTDLVGKQILSE 903
>gi|257464714|ref|ZP_05629085.1| PII uridylyl-transferase [Actinobacillus minor 202]
gi|257450374|gb|EEV24417.1| PII uridylyl-transferase [Actinobacillus minor 202]
Length = 849
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 17 LVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEW 75
L+ + N P V V N R AT I + ++ + Q L+ + I A I+S+
Sbjct: 651 LLKQQNLPLVLVGNEYARGATEIFIHCEDQNQLFARIAQELSQKKISIHDAQIITSENGL 710
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQS-----LGPRARSFRSLRRSVGVQ---------- 120
D F VT+ NG L+E E+IQQS L P +++F+++++ + Q
Sbjct: 711 VYDSFIVTESNGQALNEIRC-EQIQQSLIKVLLDPASKTFKAIKKPIKHQTFKRKTKVRF 769
Query: 121 ---AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
+ T EL DR GLL+++ + + L+ ++ A++ T R+ +++
Sbjct: 770 LANSPPNQTAFELFTLDREGLLAQLSHIFNQLELVLINAKITTIGERVEDFFVVST 825
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYI 305
PLV V + +G T + + C D+ +L L+ + ++ A +I +E+ Y + +
Sbjct: 658 PLVLVGNEYARGATEIFIHCEDQNQLFARIAQELSQKKISIHDAQIITSENGLVYDSFIV 717
Query: 306 RHVDG---NPISSEAERQRVINCL----------------EAAIKRRTS---------EG 337
+G N I E +Q +I L KR+T
Sbjct: 718 TESNGQALNEIRCEQIQQSLIKVLLDPASKTFKAIKKPIKHQTFKRKTKVRFLANSPPNQ 777
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+ EL DR GLL+ ++ IF + L + A++TT G + + F V S + E
Sbjct: 778 TAFELFTLDREGLLAQLSHIFNQLELVLINAKITTIGERVEDFFVVSTLSYEALSEEQQH 837
Query: 398 SVRKEI 403
+++ I
Sbjct: 838 QLKQHI 843
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P + ++N + + T+I+V ++ G L EL L+DL L I A++++ GE +DVF+VT
Sbjct: 834 PEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARS 109
D G ++ VSE Q+++ R ++
Sbjct: 894 DLTGKQV----VSEVRQRTIRDRLQT 915
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E I SE ++ +E+ DR GLL ++T + L + A VTT G +AV+VFYV D
Sbjct: 835 EIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTD 894
Query: 386 ASGNPVKSETIESVRKEIGLTIL 408
+G V SE + ++ TIL
Sbjct: 895 LTGKQVVSEVRQRTIRDRLQTIL 917
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T IE++GRDRPGLL E+ + LSDL ++ A V T + V Y+T
Sbjct: 847 TVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
>gi|238787238|ref|ZP_04631037.1| [Protein-PII] uridylyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238724500|gb|EEQ16141.1| [Protein-PII] uridylyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 892
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
+KPLV + +G T + + PDRP L V L V+ A + A +
Sbjct: 695 TKPLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTF 754
Query: 304 YIRHVDGNPISSEAERQRVI-NCLEAAIKR---------RTSEGIS-------------- 339
+ DG+P++ + R +I + L+ A+ R R S +
Sbjct: 755 IVLEPDGSPLAQD--RHPIIRHALQQAMTRTNYQHPRVRRLSSKLRHFSVPTETNFLPTH 812
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D +
Sbjct: 813 NERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSI 872
Query: 394 ETIESVRKEIG 404
ET R+E+
Sbjct: 873 ET----RRELA 879
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V + + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRRSVGVQAALEH-------- 125
+ +G+ L++D + +QQ++ PR R S R V
Sbjct: 757 LEPDGSPLAQDRHPIIRHALQQAMTRTNYQHPRVRRLSSKLRHFSVPTETNFLPTHNERR 816
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVL 862
>gi|344940504|ref|ZP_08779792.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
gi|344261696|gb|EGW21967.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
Length = 881
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS-ETIES 398
+EL D AGLLS + R F + + + A++TT GS+A ++FY+ D P+ T E
Sbjct: 809 IELITTDHAGLLSKIGRAFVKKDIHLHSAKITTIGSRAEDMFYITDNQSQPITDPATQEQ 868
Query: 399 VRKEI 403
+R+EI
Sbjct: 869 IREEI 873
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT IEL D GLLS++ ++ A++ T SR + YIT + PI DP
Sbjct: 806 HTIIELITTDHAGLLSKIGRAFVKKDIHLHSAKITTIGSRAEDMFYITDNQSQ-PITDPA 864
Query: 185 TLAKIKRLLLYVL 197
T +I+ +L +L
Sbjct: 865 TQEQIREEILKML 877
>gi|387774206|ref|ZP_10129478.1| protein-P-II uridylyltransferase [Haemophilus parahaemolyticus
HK385]
gi|386902350|gb|EIJ67191.1| protein-P-II uridylyltransferase [Haemophilus parahaemolyticus
HK385]
Length = 848
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYI 305
PLV V + +G T + + C D+ +L TL+ + ++ A +I +++ + + +
Sbjct: 657 PLVLVSNEYARGATEIFIHCEDQKQLFARIANTLSKKKISIHDAQIITSQNDLVFDSFIV 716
Query: 306 RHVDG---NPISSEAERQRVINCL----------------EAAIKRRT---------SEG 337
++G N I E +Q + L KR+T
Sbjct: 717 TELNGQALNEIRCEQIQQALQKELTEPQTKPFVVVKKPIKHQTFKRKTKTRFLANSNQNQ 776
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+ EL DR GLL+ V++IF + L + A++TT G + V F+VV N SE ++
Sbjct: 777 TAFELFTLDREGLLAQVSQIFNQLDLVLINAKITTIGER-VEDFFVVSTQENQALSEEVK 835
Query: 398 SVRKEIGLTIL 408
K+I T L
Sbjct: 836 KTLKKIITTEL 846
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 18 VLRMNP-PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEW 75
+L+ N P V V N R AT I + +++ + L+ + I A I+S +
Sbjct: 650 LLKQNQLPLVLVSNEYARGATEIFIHCEDQKQLFARIANTLSKKKISIHDAQIITSQNDL 709
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSLG-----PRARSFRSLRRSVGVQ---------- 120
D F VT+ NG L+E E+IQQ+L P+ + F +++ + Q
Sbjct: 710 VFDSFIVTELNGQALNEIRC-EQIQQALQKELTEPQTKPFVVVKKPIKHQTFKRKTKTRF 768
Query: 121 ---AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEAT 176
+ T EL DR GLL++V + + L ++ A++ T R+ + T E
Sbjct: 769 LANSNQNQTAFELFTLDREGLLAQVSQIFNQLDLVLINAKITTIGERVEDFFVVSTQENQ 828
Query: 177 GLPIDDPDTLAKI 189
L + TL KI
Sbjct: 829 ALSEEVKKTLKKI 841
>gi|298290064|ref|YP_003692003.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
gi|296926575|gb|ADH87384.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
Length = 932
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT++N+ + + T+++V ++ G L L Q L+ L+L I A+I++ GE +DVF+VT
Sbjct: 840 PEVTLNNSWSNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVT 899
Query: 84 DQNGNKL 90
D G K+
Sbjct: 900 DLMGAKI 906
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT +E++G DRPGLL + LS L N+ A + T R V Y+T + G I
Sbjct: 852 HTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVT-DLMGAKIIGAA 910
Query: 185 TLAKIKRLLLYVLKGDRDKRSA 206
+ I+R LL VL D + +A
Sbjct: 911 RHSAIRRALLQVLDADDEANAA 932
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL +T+ L++ A + T G +AV+VFYV D G + S
Sbjct: 855 VEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTDLMGAKIIGAARHSA 914
Query: 400 RKEIGLTILRVKDDA 414
+ L +L D+A
Sbjct: 915 IRRALLQVLDADDEA 929
>gi|242039737|ref|XP_002467263.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
gi|241921117|gb|EER94261.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
Length = 280
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 25/159 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+V +D S+ AT++++ ++ G LL+ + L +L L + +A + D + F +T
Sbjct: 75 PKVIIDQDSDPDATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSIT 134
Query: 84 DQN-GNKLSEDDVSERIQQSL-------GPRARSFRSLRRSVGVQAALEHTTIELTGR-- 133
+ G K+ + ++ E I+ ++ P + S ++ + G +A E +++
Sbjct: 135 KASTGRKIDDPELLEAIRLTIINNMLVYHPESSSQLAMGATFGPEAPTEEVDVDIATHID 194
Query: 134 ---------------DRPGLLSEVFAVLSDLKCNVMGAE 157
DRPGLL ++ ++SD+ NV E
Sbjct: 195 IYDGPERSLLVVETADRPGLLVDLVKIISDININVQSGE 233
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
+ T +E+T DR G L + L +L NV+ A V ++ + IT +TG IDDP
Sbjct: 86 DATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSITKASTGRKIDDP 145
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSV----DSTHKERRLHQMMYADRDYDMNYAESG 239
+ L I+ ++ + + S+ A+ ++ +E + + D YD
Sbjct: 146 ELLEAIRLTIINNMLVYHPESSSQLAMGATFGPEAPTEEVDVDIATHIDI-YD------- 197
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
G + L+ VE+ DRP LL D V ++D+ V E A
Sbjct: 198 ---GPERSLLVVETA-------------DRPGLLVDLVKIISDININVQSGEFDTEGLLA 241
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISL 340
++++ + G P+ EA +Q + N L ++R T+E S
Sbjct: 242 KAKFHVSY-RGKPL-MEALKQVLSNSLRYFLRRPTTEDASF 280
>gi|269138091|ref|YP_003294791.1| PII uridylyl-transferase [Edwardsiella tarda EIB202]
gi|387866822|ref|YP_005698291.1| uridylyltransferase [Edwardsiella tarda FL6-60]
gi|267983751|gb|ACY83580.1| PII uridylyl-transferase [Edwardsiella tarda EIB202]
gi|304558135|gb|ADM40799.1| uridylyltransferase [Edwardsiella tarda FL6-60]
Length = 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 39/196 (19%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEYY 304
PLV V +G T + + PDRP L F AV D + + H I + + Y +
Sbjct: 689 PLVLVSQHATRGGTEIFIYSPDRPYL-FAAVAGELDRRNLSVHDAQIFTNRDNYAMDTFV 747
Query: 305 IRHVDGNPISSEAE---RQRV-----------------------------INCLEAAIKR 332
+ DG+P++ + RQ + ++ L A R
Sbjct: 748 VLEPDGSPLAPDRHDTIRQALEHALTQPHYHPPRARRAPARLRHFSVPTEVSFLPAHNAR 807
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
R+ +EL DR GLL+ + IF E GLS+ A +TT G + ++F + D +
Sbjct: 808 RSY----MELVALDRPGLLAHIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALT 863
Query: 393 SETIESVRKEIGLTIL 408
E + + + T+L
Sbjct: 864 PEMQRELAQRLTETLL 879
>gi|89092087|ref|ZP_01165042.1| PII uridylyl-transferase [Neptuniibacter caesariensis]
gi|89083822|gb|EAR63039.1| PII uridylyl-transferase [Oceanospirillum sp. MED92]
Length = 899
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 11 VDEFEKLVL-RMNP--PRVTVDNTSNR---KATLIKVDSANKRGSLLELVQVLNDLDLII 64
+ E K +L +NP P V + TS+R AT I + SA+ + V ++ L L I
Sbjct: 679 ISEHTKAILEHLNPDEPLVLIRQTSHRVFEGATEIFIYSADIKNLFAATVAAMDQLHLNI 738
Query: 65 R--RAYISSDGEWFMDVFHVTDQNGNKLSED-------------------DVSERIQQSL 103
+ R ++ GE ++ + V + LSE+ D E IQ+ +
Sbjct: 739 QDARIIVTDSGE-VLNTYTVLSDDNTPLSENPDHLKSIKQRLIEELDDPNDYPEIIQRRV 797
Query: 104 GPRARSFRSLRRSVGVQAALEHTTI-ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
+ + F + + A+ H T+ E+ DRPGLL+ + + + +V A++ +
Sbjct: 798 PRQMKLFATPTQVFLSNDAIAHQTVLEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVG 857
Query: 163 SRMASVVYITSEATGLPIDDPDTLAKIK 190
R+ +IT E GLPI DP+ +++
Sbjct: 858 ERVEDFFFITDE-QGLPISDPELCQQLQ 884
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 36/194 (18%)
Query: 246 KPLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQ 301
+PLV + + + G T + + D L V + + + A +I +S E
Sbjct: 694 EPLVLIRQTSHRVFEGATEIFIYSADIKNLFAATVAAMDQLHLNIQDARIIVTDSGEVLN 753
Query: 302 EYYIRHVDGNPISSEAE-----RQRVINCLE------AAIKRRTSEGISL---------- 340
Y + D P+S + +QR+I L+ I+RR + L
Sbjct: 754 TYTVLSDDNTPLSENPDHLKSIKQRLIEELDDPNDYPEIIQRRVPRQMKLFATPTQVFLS 813
Query: 341 ----------ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
E+ DR GLL+ + IF + LSV +A++ + G + + F++ D G P
Sbjct: 814 NDAIAHQTVLEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVGERVEDFFFITDEQGLP 873
Query: 391 VKS-ETIESVRKEI 403
+ E + ++ EI
Sbjct: 874 ISDPELCQQLQNEI 887
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 49/88 (55%)
Query: 16 KLVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
++ L P +V + N + T+++V + ++ G L + + +L +R+A I+S GE
Sbjct: 800 QMKLFATPTQVFLSNDAIAHQTVLEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVGER 859
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSL 103
D F +TD+ G +S+ ++ +++Q +
Sbjct: 860 VEDFFFITDEQGLPISDPELCQQLQNEI 887
>gi|163801777|ref|ZP_02195674.1| PII uridylyl-transferase [Vibrio sp. AND4]
gi|159174285|gb|EDP59089.1| PII uridylyl-transferase [Vibrio sp. AND4]
Length = 874
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
SKPLV + +G T V + PD+P L V L + V+
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER----------QRVINCLEAAIK 331
H I ES + ++ HV G P A R + ++ L K
Sbjct: 737 MVLDQHGKAIEESRHSAVIKHMTHVLESGRPKKIRARRTPNKLQHFNVKTRVDFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +E D GLL+ V R F + G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRL 852
Query: 392 KSETIESVRKEI 403
E +R+++
Sbjct: 853 SEEQQTQLREKL 864
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + V S ++ +V L+ + + A I S DG + +D F
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDG-YVLDTFM 737
Query: 82 VTDQNGNKLSEDDVSERIQQSL----GPRARSFRSLRRSVGVQ-------------AALE 124
V DQ+G + E S I+ R + R+ R +Q + +
Sbjct: 738 VLDQHGKAIEESRHSAVIKHMTHVLESGRPKKIRARRTPNKLQHFNVKTRVDFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
T +E D PGLL++V +DL N+ A++ T R + +TSEA G
Sbjct: 798 RTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|154244241|ref|YP_001415199.1| PII uridylyl-transferase [Xanthobacter autotrophicus Py2]
gi|154158326|gb|ABS65542.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 969
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VTV+N + + T+++V ++ G L L L+ L+L I A++++ GE +DVF+VT
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++ I+++L
Sbjct: 930 DLMGAKITGAARQSTIRRAL 949
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 105 PRARSFRSLRRSVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN 162
P+ R ++ V V A HT +E++G DRPGLL + LS L N+ A V T
Sbjct: 860 PKGRRTFTVEPEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFG 919
Query: 163 SRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKG 199
R V Y+T + G I + I+R L+ V +G
Sbjct: 920 ERAVDVFYVT-DLMGAKITGAARQSTIRRALVAVFEG 955
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 91/226 (40%), Gaps = 39/226 (17%)
Query: 115 RSVGVQAALEH----TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVY 170
RS+ A LE TT+ + D P LLS + + N++ A +
Sbjct: 759 RSIATHATLEAGRGITTLTVVAPDHPKLLSIIAGACAAAGANIVDA-------------H 805
Query: 171 ITSEATGLPIDDPDTLAKIKRLLLYVLKGDRD----KRSANTAVSVD-STHKERRLHQMM 225
I++ GL + DT+A ++R DRD +R+ +V+ + E RL ++M
Sbjct: 806 ISTTTDGLAL---DTIA-LRRAF------DRDEDELRRAGRIQEAVEQALTGEVRLPEVM 855
Query: 226 YADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQY 285
G + +P VTV + +TVV + DRP LLF TL+ +
Sbjct: 856 -------ARKIPKGRRTFTVEPEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNL 908
Query: 286 VVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIK 331
+ A V A +Y+ + G I+ A + + L A +
Sbjct: 909 NIASAHVATFGERAVDVFYVTDLMGAKITGAARQSTIRRALVAVFE 954
>gi|338741595|ref|YP_004678557.1| [protein-PII] uridylyltransferase [Hyphomicrobium sp. MC1]
gi|337762158|emb|CCB67993.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Hyphomicrobium sp.
MC1]
Length = 932
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V ++N + + T+++V ++ G L EL L+DL L I A++++ GE +DVF+VT
Sbjct: 835 PEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARS 109
D G ++ ++E Q +L R RS
Sbjct: 895 DLLGKQV----INETRQATLRSRLRS 916
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
LE+ DR GLL ++T + L ++ A VTT G +AV+VFYV D G V +ET
Sbjct: 850 LEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTDLLGKQVINET 905
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +E++GRDRPGLL E+ + LSDL ++ A V T + V Y+T
Sbjct: 848 TVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
>gi|356546627|ref|XP_003541726.1| PREDICTED: glycogen phosphorylase 1-like [Glycine max]
Length = 983
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 27 TVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQN 86
VDN+ + +T + + N+ G L + +V L L + RA + +G++F+ F VTD +
Sbjct: 62 AVDNSDSADSTAFVIRARNQIGLLQVITRVFKVLGLTVDRATVEFEGDFFVKTFFVTDSH 121
Query: 87 GNKLSEDDVSERIQQSLG 104
GNK+ + D +RI+++L
Sbjct: 122 GNKIEDSDSLQRIKRALA 139
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK-SETIESVRKEIG 404
++ GLL +TR+F+ GL+V RA V G V F+V D+ GN ++ S++++ +++ +
Sbjct: 80 NQIGLLQVITRVFKVLGLTVDRATVEFEGDFFVKTFFVTDSHGNKIEDSDSLQRIKRALA 139
Query: 405 LTI 407
I
Sbjct: 140 EAI 142
>gi|296282185|ref|ZP_06860183.1| PII uridylyl-transferase [Citromicrobium bathyomarinum JL354]
Length = 922
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDL--DLIIRRAYISSDGEWFMDVFHVT 83
V + R ATL+ V +A+ G + + ++ + ++I R + + G + +D F V
Sbjct: 719 VHCEADDERGATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTG-YAVDNFLVQ 777
Query: 84 DQNGNKLSEDDVSERIQQSLG----------PRARSFRSLRRSVGV-----------QAA 122
D G EDD RI++S+ P+ RR G A+
Sbjct: 778 DPLGRPFGEDDQLARIERSIADGLTGGVQLVPKLAKRPLPRRGAGAFEVQPFVAFDNDAS 837
Query: 123 LEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
T IE+ RDRP LL+ + L + + A + + R A Y+T + TG I D
Sbjct: 838 HRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVT-DLTGDKITD 896
Query: 183 PDTLAKIKRLL 193
P L ++ L
Sbjct: 897 PGRLEALRAAL 907
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V DN ++ + T+I+V + ++ L L + L + +IR A+I+ GE D F+VT
Sbjct: 828 PFVAFDNDASHRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVT 887
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+++ E ++ +L
Sbjct: 888 DLTGDKITDPGRLEALRAAL 907
>gi|182435686|ref|YP_001823405.1| PII uridylyl-transferase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178464202|dbj|BAG18722.1| putative protein P-II uridylyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 819
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
++ PPRVTV +R+AT+I+V + + G L + L + +R A++S+ G +D
Sbjct: 731 VKAPPPRVTVAAAGSRRATVIEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVD 790
Query: 79 VFHVTDQNGNKLSED---DVSERIQQSLG 104
F+VT +G LS +V+ ++++LG
Sbjct: 791 AFYVTGADGEPLSPGRAAEVAGEVEKALG 819
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK----SET 395
+E+ +D GLL + + + V A V+T G+ AV+ FYV A G P+ +E
Sbjct: 751 IEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVDAFYVTGADGEPLSPGRAAEV 810
Query: 396 IESVRKEIG 404
V K +G
Sbjct: 811 AGEVEKALG 819
>gi|326776311|ref|ZP_08235576.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces griseus XylebKG-1]
gi|326656644|gb|EGE41490.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces griseus XylebKG-1]
Length = 819
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
++ PPRVTV +R+AT+I+V + + G L + L + +R A++S+ G +D
Sbjct: 731 VKAPPPRVTVAAAGSRRATVIEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVD 790
Query: 79 VFHVTDQNGNKLSED---DVSERIQQSLG 104
F+VT +G LS +V+ ++++LG
Sbjct: 791 AFYVTGADGEPLSPGRAAEVAGEVEKALG 819
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV----KSET 395
+E+ +D GLL + + + V A V+T G+ AV+ FYV A G P+ +E
Sbjct: 751 IEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVDAFYVTGADGEPLSPGRAAEV 810
Query: 396 IESVRKEIG 404
V K +G
Sbjct: 811 AGEVEKALG 819
>gi|392408543|ref|YP_006445150.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
gi|390621679|gb|AFM22886.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
Length = 889
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN-SRMASVVYITSEATGLPIDDP 183
++ I L RDR GL + +S + N++ A WTH+ +A + ++ P++DP
Sbjct: 689 YSAITLLTRDRRGLFFRIAGTMSANRINILSA--WTHSIGSVAVATFHVNDIPEGPLNDP 746
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
K VLKG+ V VD RR + + G++S
Sbjct: 747 ARWEGFKSDFRKVLKGE---------VDVDELVLARRRSRRPF------------GTSSV 785
Query: 244 RSKPL-VTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
PL V V++ T++ + DRP LL+D LT + + + E +A
Sbjct: 786 PRFPLKVQVDNAASDRSTIIEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADI 845
Query: 303 YYIRHVDGNPI 313
+Y++ GN I
Sbjct: 846 FYVQDEFGNKI 856
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +V VDN ++ ++T+I+V + ++ G L ++ + L L L I I+++ + D+F+V
Sbjct: 789 PLKVQVDNAASDRSTIIEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYV 848
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D+ GNK+ + D E I+ SL
Sbjct: 849 QDEFGNKIMDFDRMEEIRSSL 869
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS-ETIES 398
+E+ DR GLL D+TR GL+++ ++TT QA ++FYV D GN + + +E
Sbjct: 805 IEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYVQDEFGNKIMDFDRMEE 864
Query: 399 VRKEIGLTILRVKDDAYS 416
+R + + ++++ +S
Sbjct: 865 IRSSLKNHLTSMEEEHFS 882
>gi|254436503|ref|ZP_05049997.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
gi|198251949|gb|EDY76263.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
Length = 937
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + LS + NV+ A +T A+ + ++ G P +D L +++ ++
Sbjct: 756 DHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQDSEGTPYEDI-RLPRLREVI 814
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
LKG+ R A D K + + R K +T ++
Sbjct: 815 ERTLKGEVVARDA--LAGKDKVKKREK---------------------AFRVKTSITFDN 851
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ YT++ + DRP LL D TL + + A + + +Y++ + G
Sbjct: 852 EGSEIYTIIEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDMFGLKY 911
Query: 314 SSEAERQRVINCLEAAI 330
++ +R + N L AI
Sbjct: 912 HAQGKRDALENKLHEAI 928
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+E+ DR GLL D+TR N + + A + T G Q V+ FYV D G
Sbjct: 860 IEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDMFG 908
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
+T DN + T+I+VD+ ++ G L +L + L + ++ I A I++ GE +D F+V D
Sbjct: 847 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDM 906
Query: 86 NGNK 89
G K
Sbjct: 907 FGLK 910
>gi|119774274|ref|YP_927014.1| PII uridylyl-transferase [Shewanella amazonensis SB2B]
gi|119766774|gb|ABL99344.1| (Protein-PII) uridylyltransferase [Shewanella amazonensis SB2B]
Length = 856
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 30/190 (15%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI- 293
+AE + +PLV + T +G T + + C D+PKL + L + V+ ATV+
Sbjct: 649 HAEGILKHRQDEPLVLISKHTTRGGTELFVYCRDKPKLFATVMAVLDNKNINVHDATVMT 708
Query: 294 AESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIK---------RRTSEGIS----- 339
++ A + I DG P+ + Q + LE A+ R+ S +
Sbjct: 709 SKDNYALDSFVILEQDGEPLMQLSRIQSIRKGLEKALASENPRPTKFRKLSRKMKPFNVP 768
Query: 340 ---------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVV 384
+EL D GLL+ V IF +++ A++TT G +A + F +
Sbjct: 769 TQVSFLPGSRHGTSMMELIALDMPGLLARVGDIFYRCEITLLAAKITTIGERAEDFFVLQ 828
Query: 385 DASGNPVKSE 394
G + E
Sbjct: 829 TNDGQALSDE 838
>gi|417839977|ref|ZP_12486136.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
gi|341951103|gb|EGT77683.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
Length = 863
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAERQ-----------RVINCLEAAIKRRTS----------------EGIS 339
++G + + R+ + L A R+ E
Sbjct: 735 ELNGELVEFDRRRELEQALTLALQSEKLPALSIAPNRQLQHFTVQTDVRFLHENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL----- 123
I++ + D F +T+ NG +L E D ++Q+L +S + S+ L
Sbjct: 720 ITTQDGYVFDSFIITELNG-ELVEFDRRRELEQALTLALQSEKLPALSIAPNRQLQHFTV 778
Query: 124 ------------EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
EHT +EL D+PGLL++V + S+L N++ A++ T + A +I
Sbjct: 779 QTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK-AEDFFI 837
Query: 172 TSEATGLPID 181
+ G +D
Sbjct: 838 LTNQFGQALD 847
>gi|315497085|ref|YP_004085889.1| utp-glnb uridylyltransferase, glnd [Asticcacaulis excentricus CB
48]
gi|315415097|gb|ADU11738.1| UTP-GlnB uridylyltransferase, GlnD [Asticcacaulis excentricus CB
48]
Length = 959
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 27/178 (15%)
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI--DDPDTLA 187
+TG DRPGL +++ ++L NV+GA+V+T + A V+ + G P DDP +
Sbjct: 762 ITGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKPFGHDDPGRIR 821
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKP 247
++++ L + G+ + HK H+ +A+ P
Sbjct: 822 QMEKALEKAVGGE---------AAAPLIHKAINAHR----------------TAAFAIAP 856
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
V + ++ T++ + DRP LL D L + A + A +Y+
Sbjct: 857 TVVFDDESNPQMTIIEVSGRDRPGLLADVASVLARARLDTASAHIDCYGERAVDAFYV 914
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 40/176 (22%)
Query: 32 SNRKATLIKVDSANKRGSLLELVQVLNDL--DLIIRRAYISSDGEWFMDVFHVTDQNGNK 89
+ R A + ++ G +L + +L +++ + + S+ + +DVF+V D G
Sbjct: 753 TTRNAACFCITGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQ-ALDVFYVQDTQGKP 811
Query: 90 LSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL-------------------------- 123
DD RI+Q ++L ++VG +AA
Sbjct: 812 FGHDDPG-RIRQME-------KALEKAVGGEAAAPLIHKAINAHRTAAFAIAPTVVFDDE 863
Query: 124 ---EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEAT 176
+ T IE++GRDRPGLL++V +VL+ + + A + + R Y+ T
Sbjct: 864 SNPQMTIIEVSGRDRPGLLADVASVLARARLDTASAHIDCYGERAVDAFYVVDHFT 919
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEV-TTRGSQAVNVFYVVDASGNPVKSETIESVRK 401
DR GL +D+ R F G +V A+V T+ +QA++VFYV D G P + +R+
Sbjct: 766 DRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKPFGHDDPGRIRQ 822
>gi|398965080|ref|ZP_10680746.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
gi|398147534|gb|EJM36238.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
Length = 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
PLV ++ T + G T + + PD+ V + + ++ A VI S + +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 304 YI------RHVDGNPISSEAERQRVINCLE------AAIKRRTSEGIS------------ 339
YI + NP + R + L I+RR +
Sbjct: 749 YIVLDNDGESIGDNPTRIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA P+
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPL 868
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 27/185 (14%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRSLRRSVGVQ 120
+ V D +G + + DD IQ+ + PR + V +
Sbjct: 749 YIVLDNDGESIGDNPTRIKQIRDGLTEALRNPDDYPTIIQRRV-PRQLKHFAFAPQVTIH 807
Query: 121 --AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL 178
A T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 808 NDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT-DAHNQ 866
Query: 179 PIDDP 183
P+ DP
Sbjct: 867 PLSDP 871
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D + LS+ + R+Q ++
Sbjct: 862 DAHNQPLSDPLLCSRLQDAI 881
>gi|421744909|ref|ZP_16182832.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
gi|406686683|gb|EKC90781.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
Length = 849
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV V ++ AT+I+V + + G L + Q L L +R A++S+ G +D F+V
Sbjct: 764 PPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYV 823
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
TD G L E++ V++ ++++L
Sbjct: 824 TDAGGRPLGEEEAARVAKGVEEAL 847
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + + +GL V A V+T G+ AV+ FYV DA G P+ E V
Sbjct: 780 IEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYVTDAGGRPLGEEEAARV 839
Query: 400 RKEI 403
K +
Sbjct: 840 AKGV 843
>gi|345002318|ref|YP_004805172.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces sp. SirexAA-E]
gi|344317944|gb|AEN12632.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces sp. SirexAA-E]
Length = 816
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
++ PPRVTV +R AT+I+V + + G L + + L + +R A++S+ G +D
Sbjct: 728 VKAPPPRVTVAPAGSRLATVIEVRAQDAPGLLHRIGRALEQSAVRVRSAHVSTLGANAVD 787
Query: 79 VFHVTDQNGNKLSEDDVSERIQQSLG 104
F+VTD +G L V ER Q G
Sbjct: 788 AFYVTDPDGEPL----VPERAAQVAG 809
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R ++ + V A V+T G+ AV+ FYV D G P+ E V
Sbjct: 748 IEVRAQDAPGLLHRIGRALEQSAVRVRSAHVSTLGANAVDAFYVTDPDGEPLVPERAAQV 807
Query: 400 RKEI 403
E+
Sbjct: 808 AGEV 811
>gi|448748399|ref|ZP_21730033.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
gi|445564020|gb|ELY20152.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
Length = 891
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 57 LNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL------------ 103
+ L L I A I +S +W ++ F V D +G + + E +++ L
Sbjct: 730 MEQLGLSIHDARIATSHNDWTLNTFIVLDNHGQPIRDPGHIEEMRRHLVEELDDPDDYPD 789
Query: 104 -----GPRARSFRSLRRSVGVQ--AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGA 156
PR + V ++ A E T +ELT DRPGLL+ V + + ++ A
Sbjct: 790 IVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAA 849
Query: 157 EVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
++ T R+ V +IT++A G P+ DP+ +++ L+ VL
Sbjct: 850 KIATLGERVEDVFFITTKA-GEPLTDPERQQQLRERLIEVL 889
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V RIF E +S++ A++ T G + +VF++ +G P+
Sbjct: 821 LELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPL 872
>gi|319789629|ref|YP_004151262.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
gi|317114131|gb|ADU96621.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
Length = 874
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
+V VDN ++ K T+++V + ++ G L + +VL + +RRA I+++G +D F++TD
Sbjct: 788 KVKVDNETSDKYTIVEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTEGNRVIDSFYITD 847
Query: 85 QNGNKLSEDD----VSERIQQSLGPR 106
+ K+++ + ERI ++L P+
Sbjct: 848 MDYKKVTDPQKLLRIKERIVEALSPK 873
>gi|398998506|ref|ZP_10701279.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
gi|398120211|gb|EJM09878.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
Length = 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + + + DL ++ A I++ GE DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFIT 861
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N ++LS+ + R+Q ++
Sbjct: 862 DANNHQLSDPLLCSRLQDAI 881
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 35/178 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A VI S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAERQRVI-----------NCLEAAIKRRTSEGIS------------ 339
Y + DG+ I R + I + I+RR +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
LEL DR GLL+ + IF E LS+ A++ T G + +VF++ DA+ +
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITDANNH 866
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSED------------------DVSERIQQSLGPRARSFRSLRRSVGVQ- 120
+ V D +G+ + ++ D I Q PR + V +
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +ELT DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFIT-DANNHQ 867
Query: 180 IDDP 183
+ DP
Sbjct: 868 LSDP 871
>gi|238751453|ref|ZP_04612945.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
gi|238710320|gb|EEQ02546.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
Length = 892
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 33/182 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEAYQEY 303
+KPLV + +G T + + PDRP L V L V+ A + A +
Sbjct: 695 TKPLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTF 754
Query: 304 YIRHVDGNPISSEAERQRVI-NCLEAAIK---------RRTSEGIS-------------- 339
+ DG+P++ + R +I + L+ A+ RR S +
Sbjct: 755 IVLEPDGSPLAQD--RHPIIRDALQQAMTQPNYQHPRVRRLSPKLRHFSVPTETNYLPTH 812
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D +
Sbjct: 813 NERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSL 872
Query: 394 ET 395
ET
Sbjct: 873 ET 874
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 18/169 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V + + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRRSVGVQAALEH-------- 125
+ +G+ L++D + + +QQ++ PR R R V +
Sbjct: 757 LEPDGSPLAQDRHPIIRDALQQAMTQPNYQHPRVRRLSPKLRHFSVPTETNYLPTHNERR 816
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T +EL D+PGLL+ V + +DL ++ A + T R+ + + +
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLADK 865
>gi|294635116|ref|ZP_06713627.1| protein-P-II uridylyltransferase [Edwardsiella tarda ATCC 23685]
gi|451965796|ref|ZP_21919052.1| [protein-PII] uridylyltransferase [Edwardsiella tarda NBRC 105688]
gi|291091493|gb|EFE24054.1| protein-P-II uridylyltransferase [Edwardsiella tarda ATCC 23685]
gi|451315368|dbj|GAC64414.1| [protein-PII] uridylyltransferase [Edwardsiella tarda NBRC 105688]
Length = 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 39/196 (19%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEYY 304
PLV V +G T + + PDRP L F AV D + + H I + + Y +
Sbjct: 689 PLVLVSQHASRGGTEIFIYSPDRPYL-FAAVAGELDRRNLSVHDAQIFTNRDNYAMDTFV 747
Query: 305 IRHVDGNPI-------------------SSEAERQR-------------VINCLEAAIKR 332
+ DG+P+ S + R R ++ L A R
Sbjct: 748 VLEPDGSPLALDRHSTIRRALEQALTQASYQPPRVRHASARLRHFTVPTAVSFLPAHNTR 807
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
R+ +EL DR GLL+ + IF E GLS+ A +TT G + ++F + D +
Sbjct: 808 RSY----MELVALDRPGLLARIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALT 863
Query: 393 SETIESVRKEIGLTIL 408
E + + + T+L
Sbjct: 864 PEMQHELAQRLTETLL 879
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGE-WFMDVFHV 82
P V V ++R T I + S ++ + L+ +L + A I ++ + + MD F V
Sbjct: 689 PLVLVSQHASRGGTEIFIYSPDRPYLFAAVAGELDRRNLSVHDAQIFTNRDNYAMDTFVV 748
Query: 83 TDQNGNKLSED---DVSERIQQSL------GPRARSFRSLRRSVGVQAALE----HTT-- 127
+ +G+ L+ D + ++Q+L PR R + R V A+ H T
Sbjct: 749 LEPDGSPLALDRHSTIRRALEQALTQASYQPPRVRHASARLRHFTVPTAVSFLPAHNTRR 808
Query: 128 --IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
+EL DRPGLL+ + + +++ ++ GA + T R+ + +
Sbjct: 809 SYMELVALDRPGLLARIGEIFAEMGLSLHGARITTIGERVEDLFILA 855
>gi|425070066|ref|ZP_18473181.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW6]
gi|404596023|gb|EKA96553.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW6]
Length = 881
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 33/202 (16%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A++ ++P+V + T+ G T V + C DRP L L +++A +
Sbjct: 674 HAQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFT 733
Query: 295 ESPE-AYQEYYIRHVDGNPIS---SEAERQRVINCLEAA--------------------- 329
A + + +G P++ A RQ +I + A
Sbjct: 734 NRDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPT 793
Query: 330 ----IKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
I ++ +EL DR GLL+ + ++F + LS+ A +TT G + + F + D
Sbjct: 794 KINFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTD 853
Query: 386 ASGNPV----KSETIESVRKEI 403
N + K E +E + K +
Sbjct: 854 NENNALNQKMKDEVVERLTKAL 875
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGE-WFMDVFHV 82
P V + + T + + A++ + L+ +L I A I ++ + MD F V
Sbjct: 686 PMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNMAMDTFIV 745
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH----------------- 125
+ NG L+ D Q + + + + ++ + A L H
Sbjct: 746 LEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFIASNHNKR 805
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL RDRPGLL+ + V +DL ++ GA + T R+ +T
Sbjct: 806 TYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLT 852
>gi|451947389|ref|YP_007467984.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
gi|451906737|gb|AGF78331.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
Length = 855
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFH 81
N RV VDN ++ T+++V S + G L + Q L D + I RA+I+++ E +DVF+
Sbjct: 764 NEIRVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFY 823
Query: 82 VTDQNGNKLSE 92
V D K+ E
Sbjct: 824 VLDSQQEKIVE 834
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 45 NKRGSLLELVQVL--NDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSE-------DDV 95
++RG L ++ VL ++L ++ + + DG +D+ V ++G + E DD+
Sbjct: 674 DRRGLLAKICGVLGLHNLSVLNAQIFTWKDGS-AVDILDVLPEDGVEYEEKDWQAINDDL 732
Query: 96 SERIQQSLGPRARSFRSL-------RRSVGV---------QAALEHTTIELTGRDRPGLL 139
+ + LG R ++ L +RS G +A+ +T +E+ D PG L
Sbjct: 733 NLALNHRLGLGHRLYKKLSSGIGRAKRSTGTNEIRVVVDNKASDNYTVVEVYSDDSPGQL 792
Query: 140 SEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKG 199
+ L+D N+ A + T ++ V Y+ ++ I +P + +++ +LY + G
Sbjct: 793 YRITQTLADFGINIYRAFIATEVEQLIDVFYVL-DSQQEKIVEPAFIKELRDGVLYAIGG 851
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 21/173 (12%)
Query: 133 RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRL 192
RDR GLL+++ VL +V+ A+++T G +D D L +
Sbjct: 673 RDRRGLLAKICGVLGLHNLSVLNAQIFTWKD-------------GSAVDILDVLPEDG-- 717
Query: 193 LLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVE 252
V ++D ++ N +++ H+ H++ + + ++G ++ V V+
Sbjct: 718 ---VEYEEKDWQAINDDLNLALNHRLGLGHRLY---KKLSSGIGRAKRSTGTNEIRVVVD 771
Query: 253 SCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+ YTVV + D P L+ TL D +Y A + E + +Y+
Sbjct: 772 NKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFYV 824
>gi|425071434|ref|ZP_18474540.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW4]
gi|404599241|gb|EKA99701.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW4]
Length = 881
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 33/202 (16%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A++ ++P+V + T+ G T V + C DRP L L +++A +
Sbjct: 674 HAQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFT 733
Query: 295 ESPE-AYQEYYIRHVDGNPIS---SEAERQRVINCLEAA--------------------- 329
A + + +G P++ A RQ +I + A
Sbjct: 734 NRDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPT 793
Query: 330 ----IKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
I ++ +EL DR GLL+ + ++F + LS+ A +TT G + + F + D
Sbjct: 794 KINFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTD 853
Query: 386 ASGNPV----KSETIESVRKEI 403
N + K E +E + K +
Sbjct: 854 NENNALNQKMKDEVVERLTKAL 875
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGE-WFMDVFHV 82
P V + + T + + A++ + L+ +L I A I ++ + MD F V
Sbjct: 686 PMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNMAMDTFIV 745
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH----------------- 125
+ NG L+ D Q + + + + ++ + A L H
Sbjct: 746 LEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFIASNHNKR 805
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL RDRPGLL+ + V +DL ++ GA + T R+ +T
Sbjct: 806 TYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLT 852
>gi|359148709|ref|ZP_09181829.1| PII uridylyl-transferase [Streptomyces sp. S4]
Length = 850
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV V ++ AT+I+V + + G L + Q L L +R A++S+ G +D F+V
Sbjct: 765 PPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYV 824
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
TD G L E++ V++ ++++L
Sbjct: 825 TDAGGRPLGEEEAARVAKGVEEAL 848
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + + +GL V A V+T G+ AV+ FYV DA G P+ E V
Sbjct: 781 IEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYVTDAGGRPLGEEEAARV 840
Query: 400 RKEI 403
K +
Sbjct: 841 AKGV 844
>gi|227357253|ref|ZP_03841610.1| [protein-PII] uridylyltransferase [Proteus mirabilis ATCC 29906]
gi|227162516|gb|EEI47505.1| [protein-PII] uridylyltransferase [Proteus mirabilis ATCC 29906]
Length = 881
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 33/202 (16%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A++ ++P+V + T+ G T V + C DRP L L +++A +
Sbjct: 674 HAQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFT 733
Query: 295 ESPE-AYQEYYIRHVDGNPIS---SEAERQRVINCLEAA--------------------- 329
A + + +G P++ A RQ +I + A
Sbjct: 734 NRDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPT 793
Query: 330 ----IKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
I ++ +EL DR GLL+ + ++F + LS+ A +TT G + + F + D
Sbjct: 794 KINFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTD 853
Query: 386 ASGNPV----KSETIESVRKEI 403
N + K E +E + K +
Sbjct: 854 NENNALNQKMKDEVVERLTKAL 875
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGE-WFMDVFHV 82
P V + + T + + A++ + L+ +L I A I ++ + MD F V
Sbjct: 686 PMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNMAMDTFIV 745
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH----------------- 125
+ NG L+ D Q + + + + ++ + A L H
Sbjct: 746 LEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFIASNHNKR 805
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL RDRPGLL+ + V +DL ++ GA + T R+ +T
Sbjct: 806 TYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLT 852
>gi|16273605|ref|NP_439860.1| PII uridylyl-transferase [Haemophilus influenzae Rd KW20]
gi|260581059|ref|ZP_05848881.1| protein-P-II uridylyltransferase [Haemophilus influenzae RdAW]
gi|1169938|sp|P43919.1|GLND_HAEIN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|1574572|gb|AAC23362.1| uridylyl transferase (glnD) [Haemophilus influenzae Rd KW20]
gi|260092299|gb|EEW76240.1| protein-P-II uridylyltransferase [Haemophilus influenzae RdAW]
Length = 863
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 28/175 (16%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ ++ E
Sbjct: 735 ELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+EL D+AGLL+ V++IF E L++ A++TT G +A + F + + G + E
Sbjct: 795 MELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALARE 849
>gi|436841087|ref|YP_007325465.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169993|emb|CCO23364.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 843
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P ++++DN S+ TL++V + ++ G L ++ + + +++ IR A IS+ G+ DVFH+
Sbjct: 753 PTQISIDNESSETYTLLEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHI 812
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
G K+ + + + + +L
Sbjct: 813 ESPEGGKIKDKEHANELVSAL 833
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 130 LTGRDRPGLLSEVFAVLSDLKCNVMGAEV--WTHNSRMASVVYITSEATGLPIDDPDTLA 187
+T RD+ L + VL+ N++ A++ W+ + + + + T T D A
Sbjct: 661 VTSRDQDFLFAAQSGVLALHSINILSADIFSWSDGTAVNTFIVETPSDTA----PADIWA 716
Query: 188 KIKRLLLYVLKGDRDKRSANTAVSVD-STHKERRLHQMMYADRDYDMNYAESGSASGRSK 246
+I+R ++Y L G +S+D HK+R + + +SG++ R
Sbjct: 717 RIERSIMYALTG---------RLSLDYRLHKKR------------NSLFVKSGAS--RVP 753
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
+++++ + + YT++ + DR +L+D + M + A + + ++I
Sbjct: 754 TQISIDNESSETYTLLEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHIE 813
Query: 307 HVDGNPISSEAERQRVINCLEAAI 330
+G I + +++ LE A+
Sbjct: 814 SPEGGKIKDKEHANELVSALEYAL 837
>gi|307546396|ref|YP_003898875.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
gi|307218420|emb|CBV43690.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
Length = 926
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V RIF E ++++ A++ T G + +VF++ D +G P+
Sbjct: 854 LELVAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGAPL 905
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 56 VLNDLDLIIRRAYIS-SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL---------GP 105
+ L L I A I+ S W ++ F V D +G+ + + E I+ L P
Sbjct: 762 AMEQLGLSIHDARIATSSNNWTLNTFIVLDDHGHAIRDPARLEEIRHHLVEELDDPDDYP 821
Query: 106 R------ARSFRSLRRSVGV----QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
+ R + R V A E T +EL DRPGLL+ V + + +
Sbjct: 822 QIVTRHTPRQLKHFRVPTEVFIRQDPANERTLLELVAPDRPGLLARVGRIFMEQDIALSA 881
Query: 156 AEVWTHNSRMASVVYITSEATGLPIDD 182
A++ T R+ V +IT +A G P+ D
Sbjct: 882 AKIATLGERVEDVFFITDKA-GAPLID 907
>gi|357406291|ref|YP_004918215.1| [protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
gi|351718956|emb|CCE24630.1| [Protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
Length = 878
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK-SETIES 398
+EL D AGLLS + + ++ + + A++TT GS+A ++FY D NP++ ET+++
Sbjct: 806 MELITTDHAGLLSKIGHVLNDHNIQLHDAKITTIGSRAEDMFYFTDYQSNPIQDHETLQN 865
Query: 399 VRKEI 403
+ + I
Sbjct: 866 LEQAI 870
>gi|417844793|ref|ZP_12490832.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
gi|341956273|gb|EGT82703.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
Length = 863
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGTKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ + E
Sbjct: 735 ELNGELVEFDRRRELEQALTLALQSEKLPALSIMPNRQLQHFIVQTDVRFLHENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
EHT +EL D+PGLL++V + S+L N++ A++ T + A +I + G +D
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK-AEDFFILTNQFGQALD 847
>gi|145639126|ref|ZP_01794733.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|145271688|gb|EDK11598.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|309750707|gb|ADO80691.1| PII uridylyl-transferase [Haemophilus influenzae R2866]
Length = 863
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGTKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAERQRVI-NCLEAAIK----------------------------RRTSEG 337
++G + E +R+R + L A++ E
Sbjct: 735 ELNGELV--EFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQTDVRFLHENKKEH 792
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E
Sbjct: 793 TEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQRE 852
Query: 398 SVR 400
+R
Sbjct: 853 ILR 855
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL----- 123
I++ + D F +T+ NG +L E D ++Q+L +S + S+ L
Sbjct: 720 ITTQDGYVFDSFIITELNG-ELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTV 778
Query: 124 ------------EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
EHT +EL D+PGLL++V + ++L N++ A++ T + A +I
Sbjct: 779 QTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK-AEDFFI 837
Query: 172 TSEATGLPID 181
+ G +D
Sbjct: 838 LTNQFGQALD 847
>gi|224097618|ref|XP_002311013.1| predicted protein [Populus trichocarpa]
gi|222850833|gb|EEE88380.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 37/180 (20%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY 300
A G P+V ++ +D T+V L DR L D + L D+ V TV+ E P
Sbjct: 6 ADGVPIPVVLIDQDSDSESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQ 65
Query: 301 QEYYIRHVDG-----NPISSEAERQRVINCL-----EAAIKRRTSEGISLE--------- 341
+++I +D +P E R +IN L E++ + E ++
Sbjct: 66 TKFFITRLDSGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVD 125
Query: 342 ----------------LCCE--DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
LC E DR GLL ++ +I + + V AE+ T G A + F+V
Sbjct: 126 ITTHVHVKEDGPKRSLLCVETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHV 185
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 25/211 (11%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
E T ++L+ DR G L + L DL +V V T + +IT +G ++DP
Sbjct: 23 ESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQTKFFITRLDSGRKVEDP 82
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAV--SVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
D L +I+ ++ L + S A+ + E++L D D+
Sbjct: 83 DMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKL--------DVDITTHVHVKE 134
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
G + L+ VE+ DRP LL + + + D+ V A + E A
Sbjct: 135 DGPKRSLLCVETA-------------DRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKD 181
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKR 332
++++ + G + + Q ++NCL ++R
Sbjct: 182 KFHVSY--GGAALNSSLSQVLVNCLRYYLRR 210
>gi|325109443|ref|YP_004270511.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
gi|324969711|gb|ADY60489.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
Length = 888
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
V +DN ++ +AT++ V + ++ G L + + + DLDL + A I++ + +DVF+VTD
Sbjct: 794 VVIDNDTSSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDL 853
Query: 86 NGNKL----SEDDVSERIQQSL 103
+GNK+ S + +R+Q+ L
Sbjct: 854 DGNKILDEYSRKAIRDRVQRVL 875
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
+S+ +++ DRAGLL +++ + LSVT A +TT Q V+VFYV D GN +
Sbjct: 801 SSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDLDGNKILD 860
Query: 394 ETIESVRKEIGLTILRVKDD 413
E RK I + RV D+
Sbjct: 861 EY---SRKAIRDRVQRVLDE 877
>gi|386388893|ref|ZP_10073738.1| protein-P-II uridylyltransferase [Haemophilus paraphrohaemolyticus
HK411]
gi|385696898|gb|EIG27360.1| protein-P-II uridylyltransferase [Haemophilus paraphrohaemolyticus
HK411]
Length = 848
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 17 LVLRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEW 75
L+ + P V + N R AT I + +++ + L+ + I A I+S +
Sbjct: 650 LLKQQQLPLVLISNEHARGATEIFIHCEDQKQLFARIANALSKKKISIHDAQIITSQNDL 709
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSLG-----PRARSFRSLRRSVG------------ 118
D F VT+QNG L E E+IQQ+L P+ + F +++ +
Sbjct: 710 VFDSFIVTEQNGMALDEIR-CEQIQQTLQKELTEPQLKPFSVVKKPIKHQTFKRKTKVRF 768
Query: 119 -VQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
V + L T EL DR GLL++V + + L ++ A++ T R+ ++++
Sbjct: 769 LVNSNLNQTAFELFTLDREGLLAQVSQIFNQLDLVLINAKITTIGERVEDFFVVSTQ 825
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 30/186 (16%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYI 305
PLV + + +G T + + C D+ +L L+ + ++ A +I +++ + + +
Sbjct: 657 PLVLISNEHARGATEIFIHCEDQKQLFARIANALSKKKISIHDAQIITSQNDLVFDSFIV 716
Query: 306 RHVDG---NPISSEAERQ-----------RVINCLEAAIKRRTSE--------------G 337
+G + I E +Q + + ++ IK +T +
Sbjct: 717 TEQNGMALDEIRCEQIQQTLQKELTEPQLKPFSVVKKPIKHQTFKRKTKVRFLVNSNLNQ 776
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+ EL DR GLL+ V++IF + L + A++TT G + V F+VV N SET +
Sbjct: 777 TAFELFTLDREGLLAQVSQIFNQLDLVLINAKITTIGER-VEDFFVVSTQENKALSETQK 835
Query: 398 SVRKEI 403
K I
Sbjct: 836 KELKRI 841
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 32 SNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLS 91
SN T ++ + ++ G L ++ Q+ N LDL++ A I++ GE D F V+ Q LS
Sbjct: 772 SNLNQTAFELFTLDREGLLAQVSQIFNQLDLVLINAKITTIGERVEDFFVVSTQENKALS 831
Query: 92 EDDVSE 97
E E
Sbjct: 832 ETQKKE 837
>gi|145629183|ref|ZP_01784982.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
gi|144978686|gb|EDJ88409.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
Length = 863
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGTKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAERQRVI-NCLEAAIK----------------------------RRTSEG 337
++G + E +R+R + L A++ E
Sbjct: 735 ELNGELV--EFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQTDVRFLHENKKEH 792
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E
Sbjct: 793 TEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQRE 852
Query: 398 SVR 400
+R
Sbjct: 853 ILR 855
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL----- 123
I++ + D F +T+ NG +L E D ++Q+L +S + S+ L
Sbjct: 720 ITTQDGYVFDSFIITELNG-ELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTV 778
Query: 124 ------------EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
EHT +EL D+PGLL++V + ++L N++ A++ T + A +I
Sbjct: 779 QTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK-AEDFFI 837
Query: 172 TSEATGLPID 181
+ G +D
Sbjct: 838 LTNQFGQALD 847
>gi|302542214|ref|ZP_07294556.1| protein-P-II uridylyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302459832|gb|EFL22925.1| protein-P-II uridylyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 448
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVT+ S++ AT+I+V + + G L + + L L +R A++S+ G +D F+V
Sbjct: 364 PPRVTIAPGSSQLATVIEVRAQDIPGLLHRIGRALEAAGLTVRSAHVSTLGANAVDAFYV 423
Query: 83 TDQNGNKLSE---DDVSERIQQSL 103
TD G L+ +V+ ++Q+L
Sbjct: 424 TDPTGAPLAPMRAAEVAREVEQAL 447
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R GL+V A V+T G+ AV+ FYV D +G P+ V
Sbjct: 380 IEVRAQDIPGLLHRIGRALEAAGLTVRSAHVSTLGANAVDAFYVTDPTGAPLAPMRAAEV 439
Query: 400 RKEI 403
+E+
Sbjct: 440 AREV 443
>gi|374623042|ref|ZP_09695559.1| (Protein-PII) uridylyltransferase [Ectothiorhodospira sp. PHS-1]
gi|373942160|gb|EHQ52705.1| (Protein-PII) uridylyltransferase [Ectothiorhodospira sp. PHS-1]
Length = 898
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 33/178 (18%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306
PLV V T +G T + L D P L LT + + A +I + + ++
Sbjct: 696 PLVLVRQETARGSTEIFLYTRDHPHLFALTATALTQLGLDIVDARIITTRTDRTLDTFLV 755
Query: 307 HVD-GNPISSEAERQRVINCL-----------EAAIKRRTSEGIS--------------- 339
D G PI+S AER + I L I+R T +
Sbjct: 756 LEDTGQPIAS-AERVQEIGRLLRERLNDPDKRPGVIRRTTPRRLKHFDVATQVSFDPLPH 814
Query: 340 -----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
L + DR GLLS + + + G+ V A++ T G QA +VFYV + + P++
Sbjct: 815 HNRTVLSISTADRPGLLSRIGIVLMDCGVKVYNAKIATAGEQADDVFYVTELNDQPIQ 872
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T + ++ DRPGLLS + VL D V A++ T + V Y+T E PI DP+
Sbjct: 818 TVLSISTADRPGLLSRIGIVLMDCGVKVYNAKIATAGEQADDVFYVT-ELNDQPIQDPE 875
>gi|389866034|ref|YP_006368275.1| [protein-PII] uridylyltransferase [Modestobacter marinus]
gi|388488238|emb|CCH89811.1| [Protein-PII] uridylyltransferase [Modestobacter marinus]
Length = 787
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DRAGLL +T + GL V+ A V T G+ AV+ FYV D SG P+ + E
Sbjct: 707 VEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDPSGTPIDPDQRERA 766
Query: 400 RKEIGLTILRVKDDA 414
+ + + V+ DA
Sbjct: 767 ERAL---VAAVRGDA 778
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 128 IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLA 187
+E+ DR GLL + A L+D +V A V T + Y+ S+ +G PI DPD
Sbjct: 707 VEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYV-SDPSGTPI-DPDQRE 764
Query: 188 KIKRLLLYVLKGD 200
+ +R L+ ++GD
Sbjct: 765 RAERALVAAVRGD 777
>gi|393722132|ref|ZP_10342059.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26605]
Length = 914
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 27/217 (12%)
Query: 10 VVDEFEKLVLRMNPPRVTVDNT--SNRKATLIKVDSANKRGSLLELVQVLN--DLDLIIR 65
V+D +LV ++++ R ATL+ + +A+ G + ++ ++I
Sbjct: 695 VIDRNARLVAEAGDAQLSIAAQVYPERGATLVTIYAADHPGLFYRIAGAISVAGGNIIDA 754
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLG--------------------P 105
R + + DG +D F V D G E ER++QS+ P
Sbjct: 755 RIHTTRDG-MALDNFLVQDPYGRPFDEAPQLERLKQSIEDALANRGKMIDRLMAKPLPRP 813
Query: 106 RARSFRSLRRS-VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSR 164
RA +F + + +A+ T IE+ RDRP LL ++ L + + A V T+ R
Sbjct: 814 RAEAFAIVPNVLIDNKASNRFTVIEVNARDRPALLHQLAYSLFQSRVTIHSAHVATYGER 873
Query: 165 MASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDR 201
Y+T + TG I L I+R LL G+R
Sbjct: 874 AVDTFYLT-DLTGDKIGAASRLKTIERRLLAAAAGER 909
>gi|319896795|ref|YP_004134989.1| uridylyltransferase [Haemophilus influenzae F3031]
gi|317432298|emb|CBY80651.1| uridylyltransferase [Haemophilus influenzae F3031]
Length = 863
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAERQRVI-NCLEAAIKRRTSEGIS-------------------------- 339
++G + E +R+R + L A++ +S
Sbjct: 735 ELNGELV--EFDRRRELEQALTVALQSEKLPALSITPNRQLQHFIVQTDVRFLHENKKEH 792
Query: 340 --LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E
Sbjct: 793 TEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQRE 852
Query: 398 SVR 400
+R
Sbjct: 853 ILR 855
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL----- 123
I++ + D F +T+ NG +L E D ++Q+L +S + S+ L
Sbjct: 720 ITTQDGYVFDSFIITELNG-ELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFIV 778
Query: 124 ------------EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
EHT +EL D+PGLL++V + ++L N++ A++ T + A +I
Sbjct: 779 QTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK-AEDFFI 837
Query: 172 TSEATGLPID 181
+ G +D
Sbjct: 838 LTNQFGQALD 847
>gi|116748021|ref|YP_844708.1| UTP-GlnB uridylyltransferase GlnD [Syntrophobacter fumaroxidans
MPOB]
gi|116697085|gb|ABK16273.1| UTP-GlnB uridylyltransferase, GlnD [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 22 NPPR----VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFM 77
N PR V VD ++ T+I+V + ++ G L + L LD+ I+ A IS+ G
Sbjct: 771 NLPRKDDIVLVDEEASDFYTIIEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTPGAQVA 830
Query: 78 DVFHVTDQNGNKLSEDDVSERIQQSL 103
DVF+VTD +GNKL + ++ E+I+ SL
Sbjct: 831 DVFYVTDLSGNKLMDYEMHEKIRVSL 856
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS-ETIES 398
+E+ DR G+L +T +S+ A+++T G+Q +VFYV D SGN + E E
Sbjct: 792 IEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTPGAQVADVFYVTDLSGNKLMDYEMHEK 851
Query: 399 VRKEIGLTILRV 410
+R + ++ RV
Sbjct: 852 IRVSLLDSLTRV 863
>gi|338999274|ref|ZP_08637924.1| PII uridylyl-transferase [Halomonas sp. TD01]
gi|338763838|gb|EGP18820.1| PII uridylyl-transferase [Halomonas sp. TD01]
Length = 891
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 57 LNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL------------ 103
+ L L I A I +S +W ++ F V D G + + + E +++ L
Sbjct: 730 MEQLGLSIHDARIATSHNDWTLNTFIVLDHYGQPIRDPEHIEEMRRHLVEELDDPDDYPE 789
Query: 104 -----GPRARSFRSLRRSVGVQ--AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGA 156
PR + V ++ A E T +ELT DRPGLL+ V + + + A
Sbjct: 790 IVTRHTPRQLKHFKVPTEVVIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSAA 849
Query: 157 EVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
++ T R+ V +IT++A G P+ DP+ +++ L+ VL
Sbjct: 850 KIATLGERVEDVFFITTKA-GEPLTDPERQQQLRERLIEVL 889
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V RIF E ++++ A++ T G + +VF++ +G P+
Sbjct: 821 LELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITTKAGEPL 872
>gi|197286133|ref|YP_002152005.1| PII uridylyl-transferase [Proteus mirabilis HI4320]
gi|194683620|emb|CAR44522.1| [protein-PII] uridylyltransferase [Proteus mirabilis HI4320]
Length = 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 33/202 (16%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A++ ++P+V + T+ G T + + C DRP L L +++A +
Sbjct: 674 HAQALIEHNSAEPMVLISQQTEHGGTEIFIWCADRPSLFASVAGELDRRNLNIHNAQIFT 733
Query: 295 ESPE-AYQEYYIRHVDGNPIS---SEAERQRVINCLEAA--------------------- 329
A + + +G P++ A RQ +I + A
Sbjct: 734 NRDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPT 793
Query: 330 ----IKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
I ++ +EL DR GLL+ + ++F + LS+ A +TT G + + F + D
Sbjct: 794 KINFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTD 853
Query: 386 ASGNPV----KSETIESVRKEI 403
N + K E +E + K +
Sbjct: 854 NENNALNQKMKDEVVERLTKAL 875
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGE-WFMDVFHV 82
P V + + T I + A++ + L+ +L I A I ++ + MD F V
Sbjct: 686 PMVLISQQTEHGGTEIFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNMAMDTFIV 745
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAALEH----------------- 125
+ NG L+ D Q + + + + ++ + A L H
Sbjct: 746 LEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFIASNHNKR 805
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
T +EL RDRPGLL+ + V +DL ++ GA + T R+ +T
Sbjct: 806 TYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLT 852
>gi|449457765|ref|XP_004146618.1| PREDICTED: glycogen phosphorylase 1-like [Cucumis sativus]
Length = 954
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P ++VDN+ +T + + N+ G L + +V L L I +A + +GE+F F V+
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D +GNK+ + +RI+++L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS-ETIESVRKEI 403
+R GLL +TR+F+ GLS+ +A V G F+V D+ GN +++ E+I+ ++K +
Sbjct: 82 NRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVSDSHGNKIENLESIDRIKKAL 140
>gi|449484539|ref|XP_004156910.1| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase 1-like
[Cucumis sativus]
Length = 954
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P ++VDN+ +T + + N+ G L + +V L L I +A + +GE+F F V+
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D +GNK+ + +RI+++L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS-ETIESVRKEI 403
+R GLL +TR+F+ GLS+ +A V G F+V D+ GN +++ E+I+ ++K +
Sbjct: 82 NRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVSDSHGNKIENLESIDRIKKAL 140
>gi|291448076|ref|ZP_06587466.1| PII uridylyl-transferase [Streptomyces roseosporus NRRL 15998]
gi|291351023|gb|EFE77927.1| PII uridylyl-transferase [Streptomyces roseosporus NRRL 15998]
Length = 819
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
++ PPRVTV +R+AT+I+V + + G L + L + +R A++S+ G +D
Sbjct: 731 VKAPPPRVTVAAAGSRRATVIEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVD 790
Query: 79 VFHVTDQNGNKLSE---DDVSERIQQSLG 104
F+VT +G L+ +V+ ++++LG
Sbjct: 791 AFYVTGTDGEPLTPARASEVAREVEKALG 819
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV----KSET 395
+E+ +D GLL + + + V A V+T G+ AV+ FYV G P+ SE
Sbjct: 751 IEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVDAFYVTGTDGEPLTPARASEV 810
Query: 396 IESVRKEIG 404
V K +G
Sbjct: 811 AREVEKALG 819
>gi|302781406|ref|XP_002972477.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
gi|302805113|ref|XP_002984308.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300148157|gb|EFJ14818.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300159944|gb|EFJ26563.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
Length = 236
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 36/217 (16%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +EL+ DR G L + L DL NV+ V ++ + IT ATG ++DP+
Sbjct: 46 TIVELSYGDRLGALLDTMKALKDLGLNVVKGSVAVSGKTKSNRLSITRAATGRKVEDPEL 105
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L I+ ++ L + S A+ G A G+
Sbjct: 106 LESIRLTIISNLLQYHPESSEKLAM----------------------------GEAFGKK 137
Query: 246 KP----LVTVESCTDKG--YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
P + T + TD+G +++ + D+P LL D V +T V A + E A
Sbjct: 138 PPKKIDVKTHITVTDQGPARSLLTIETADKPGLLLDIVEMITATSVTVESAEIDTEGLVA 197
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+++ + G +++ + ++NCL ++R SE
Sbjct: 198 RDRFHVSY--GGAALTKSLAEVLVNCLRFHLRRSESE 232
>gi|304312446|ref|YP_003812044.1| PII uridylyl-transferase [gamma proteobacterium HdN1]
gi|301798179|emb|CBL46401.1| PII uridylyl-transferase (Uridylyl-removing enzyme) [gamma
proteobacterium HdN1]
Length = 902
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 35/205 (17%)
Query: 233 MNYAESGSASG-RSKPLVTVESCTDKGY---TVVNLRCPDRPKLLFDAVCTLTDMQYVVY 288
+++ E+ A G + +PLV V ++ Y T V + D P L V LT + +
Sbjct: 688 VHHTEAILAHGTKEEPLVLVGKTDERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIA 747
Query: 289 HATVI-AESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRT------------- 334
A +I A + Y I G + E +++ L + T
Sbjct: 748 DARIITAANQYTLDTYVIMEEGGAAVVDETRIEQIARKLRTTLADPTRFPDIVHRPLPRA 807
Query: 335 -----------------SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQA 377
S L++ DR GLL+++ +IF +G+ + A++ T G +A
Sbjct: 808 LKHFRVATEITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERA 867
Query: 378 VNVFYVVDASGNPVKSETIESVRKE 402
+VFY+ D +G + + KE
Sbjct: 868 EDVFYITDTNGEMLHDPEFCATLKE 892
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 24/193 (12%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V V T RK AT + + + + V L L+L I A I++ ++ +D
Sbjct: 703 PLVLVGKTDERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIADARIITAANQYTLDT 762
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLG---------------PRARSFRSLRRSVGVQAALE 124
+ + ++ G + ++ E+I + L P R+ + R + + A +
Sbjct: 763 YVIMEEGGAAVVDETRIEQIARKLRTTLADPTRFPDIVHRPLPRALKHFRVATEITLAND 822
Query: 125 ----HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI 180
T +++T DRPGLL+E+ + + GA++ T R V YIT + G +
Sbjct: 823 LDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYIT-DTNGEML 881
Query: 181 DDPDTLAKIKRLL 193
DP+ A +K L
Sbjct: 882 HDPEFCATLKERL 894
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 47/81 (58%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
+T+ N + +AT++ + + ++ G L E+ ++ ++I+ A I++ GE DVF++TD
Sbjct: 817 ITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDT 876
Query: 86 NGNKLSEDDVSERIQQSLGPR 106
NG L + + +++ L R
Sbjct: 877 NGEMLHDPEFCATLKERLRER 897
>gi|289768850|ref|ZP_06528228.1| protein-P-II uridylyltransferase [Streptomyces lividans TK24]
gi|289699049|gb|EFD66478.1| protein-P-II uridylyltransferase [Streptomyces lividans TK24]
Length = 835
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV ++R AT+I+V + + G L L + L + +R A++S+ G +D F+V
Sbjct: 750 PPRVTVAPAASRLATVIEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVDAFYV 809
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T G L D+ V+ +++SL
Sbjct: 810 TRGEGTPLPGDEAASVARGLEESL 833
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R G+ V A V+T G+ AV+ FYV G P+ + SV
Sbjct: 766 IEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVDAFYVTRGEGTPLPGDEAASV 825
Query: 400 RKEI 403
+ +
Sbjct: 826 ARGL 829
>gi|239991076|ref|ZP_04711740.1| PII uridylyl-transferase [Streptomyces roseosporus NRRL 11379]
Length = 814
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
++ PPRVTV +R+AT+I+V + + G L + L + +R A++S+ G +D
Sbjct: 726 VKAPPPRVTVAAAGSRRATVIEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVD 785
Query: 79 VFHVTDQNGNKLSE---DDVSERIQQSLG 104
F+VT +G L+ +V+ ++++LG
Sbjct: 786 AFYVTGTDGEPLTPARASEVAREVEKALG 814
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV----KSET 395
+E+ +D GLL + + + V A V+T G+ AV+ FYV G P+ SE
Sbjct: 746 IEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVDAFYVTGTDGEPLTPARASEV 805
Query: 396 IESVRKEIG 404
V K +G
Sbjct: 806 AREVEKALG 814
>gi|189218779|ref|YP_001939420.1| UTP:GlnB (protein PII) uridylyltransferase [Methylacidiphilum
infernorum V4]
gi|189185637|gb|ACD82822.1| UTP:GlnB (protein PII) uridylyltransferase [Methylacidiphilum
infernorum V4]
Length = 908
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 226 YADRDYDM-------NYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVC 278
+ D YD+ E G + + + K YT+++++ PD+P LL+
Sbjct: 795 FLDESYDIFSRIPKPGIMEKKEFEGEFPTSIQFDQQSSKNYTILDIQTPDKPALLYRIAN 854
Query: 279 TLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAI 330
L D+ + A + E A +YI + GN ++ E E + ++ L AI
Sbjct: 855 ALLDLGIEIVSARIATEKGAALDTFYILNSSGNKVTKETEIKEILKNLRKAI 906
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET---- 395
L++ D+ LL + + G+ + A + T A++ FY++++SGN V ET
Sbjct: 838 LDIQTPDKPALLYRIANALLDLGIEIVSARIATEKGAALDTFYILNSSGNKVTKETEIKE 897
Query: 396 -IESVRKEIGL 405
++++RK IG+
Sbjct: 898 ILKNLRKAIGI 908
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P + D S++ T++ + + +K L + L DL + I A I+++ +D F++
Sbjct: 822 PTSIQFDQQSSKNYTILDIQTPDKPALLYRIANALLDLGIEIVSARIATEKGAALDTFYI 881
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGV 119
+ +GNK++++ + I ++LR+++G+
Sbjct: 882 LNSSGNKVTKETEIKEI----------LKNLRKAIGI 908
>gi|422404700|ref|ZP_16481751.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878198|gb|EGH12347.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 118
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 21 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 80
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 81 DANNHPLSDPQLCSQLQDAI 100
Score = 45.8 bits (107), Expect = 0.039, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 36 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 87
Score = 39.3 bits (90), Expect = 3.7, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A P+ DP
Sbjct: 34 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DANNHPLSDPQL 92
Query: 186 LAKIK 190
++++
Sbjct: 93 CSQLQ 97
>gi|21223940|ref|NP_629719.1| PII uridylyl-transferase [Streptomyces coelicolor A3(2)]
gi|7387705|sp|O69873.1|GLND_STRCO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|3191978|emb|CAA19377.1| putative protein pII uridylyltransferase [Streptomyces coelicolor
A3(2)]
Length = 835
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV ++R AT+I+V + + G L L + L + +R A++S+ G +D F+V
Sbjct: 750 PPRVTVAPAASRLATVIEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVDAFYV 809
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T G L D+ V+ +++SL
Sbjct: 810 TRGEGTPLPGDEAASVARGLEESL 833
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R G+ V A V+T G+ AV+ FYV G P+ + SV
Sbjct: 766 IEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVDAFYVTRGEGTPLPGDEAASV 825
Query: 400 RKEI 403
+ +
Sbjct: 826 ARGL 829
>gi|374620392|ref|ZP_09692926.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
gi|374303619|gb|EHQ57803.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
Length = 869
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVF 80
++P VT NR T++++ S ++ G L + Q++ D + I+ A I + GE DVF
Sbjct: 777 LSPTEVTFIEDQNRNLTIMELSSPDRPGLLARVGQIMADNQISIQGAKIQTLGERVEDVF 836
Query: 81 HVTDQNGNKLSEDDVSERIQQSL 103
+T G++L++D + ER+++ +
Sbjct: 837 FLTTDQGDRLADDTICERLREQV 859
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 243 GRSKPLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCT-LTDMQYVVYHATVIAESPE 298
G S+PLV ++ ++ T + + D + F VC+ L + + A + + +
Sbjct: 665 GSSEPLVLIKQSSESLIANATQIFVHTHDTENV-FSKVCSALELLDLSINDARIYSGTDG 723
Query: 299 AYQE-YYIRHVDGNPISSEAERQRVI--NCLEAAIKRRTSEG------------------ 337
A + +++ DG+PI S E +I + +EA S+G
Sbjct: 724 ATLDTFFVLKADGSPIDSAPETLTLIERSIVEALSASSVSQGNQRMNRTLRSFLSPTEVT 783
Query: 338 ---------ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+EL DR GLL+ V +I +N +S+ A++ T G + +VF++ G
Sbjct: 784 FIEDQNRNLTIMELSSPDRPGLLARVGQIMADNQISIQGAKIQTLGERVEDVFFLTTDQG 843
Query: 389 NPVKSETI-ESVRKEI 403
+ + +TI E +R+++
Sbjct: 844 DRLADDTICERLREQV 859
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 24 PRVTVDNTSNR---KATLIKVDSANKRGSLLELVQVLNDLDLIIR--RAYISSDGEWFMD 78
P V + +S AT I V + + ++ L LDL I R Y +DG +D
Sbjct: 669 PLVLIKQSSESLIANATQIFVHTHDTENVFSKVCSALELLDLSINDARIYSGTDGA-TLD 727
Query: 79 VFHVTDQNGN------------------KLSEDDVSERIQQSLGPRARSFRSLRRSVGVQ 120
F V +G+ LS VS+ Q + RSF S ++
Sbjct: 728 TFFVLKADGSPIDSAPETLTLIERSIVEALSASSVSQG-NQRMNRTLRSFLSPTEVTFIE 786
Query: 121 AALEHTTI-ELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
+ TI EL+ DRPGLL+ V +++D + ++ GA++ T R+ V ++T++
Sbjct: 787 DQNRNLTIMELSSPDRPGLLARVGQIMADNQISIQGAKIQTLGERVEDVFFLTTDQGDRL 846
Query: 180 IDD 182
DD
Sbjct: 847 ADD 849
>gi|407070690|ref|ZP_11101528.1| PII uridylyl-transferase [Vibrio cyclitrophicus ZF14]
Length = 873
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA--YISSDGEWFMDVFH 81
P V + + R T + V ++ +V L+ + + A +S DG +D F
Sbjct: 679 PLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKDGH-VLDTFI 737
Query: 82 VTDQNGNKLSE---------------DDVSERIQQSLGPRARSFRSLRRSVGV--QAALE 124
V DQ+G + E D +I+ PR ++ V + +
Sbjct: 738 VLDQHGKAIDEARHKAVAKHLVHVLADGRPTKIKTRRTPRNLQHFKVKTLVEFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
HT +EL D PGLL+EV A ++L N+ GA++ T R + +TS+A G
Sbjct: 798 HTLMELRALDTPGLLAEVGATFAELDINLHGAKITTIGERAEDLFILTSDAGG 850
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 29/188 (15%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVY---------------- 288
S+PLV + +G T V + C D+ L V L + V+
Sbjct: 677 SQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKDGHVLDTF 736
Query: 289 -----HATVIAESPEAYQEYYIRHV--DGNPISSEAER------QRVINCLEAAIKRRTS 335
H I E+ ++ HV DG P + R + L + ++
Sbjct: 737 IVLDQHGKAIDEARHKAVAKHLVHVLADGRPTKIKTRRTPRNLQHFKVKTLVEFLPTKSK 796
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+ +EL D GLL++V F E +++ A++TT G +A ++F + +G + E
Sbjct: 797 KHTLMELRALDTPGLLAEVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQ 856
Query: 396 IESVRKEI 403
+++R+ +
Sbjct: 857 EQALRERL 864
>gi|90022247|ref|YP_528074.1| PII uridylyl-transferase [Saccharophagus degradans 2-40]
gi|89951847|gb|ABD81862.1| protein-P-II uridylyltransferase [Saccharophagus degradans 2-40]
Length = 900
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 66 RAYISSDGEWFMDVFHVTDQNGNKLSEDDV-SERIQQSLGPRARSFRSLRRSVGVQAALE 124
R Y +++G + D F+V D N + +D SE+I++S+ R R V + +
Sbjct: 741 RVYSAANG-YTADTFYVLDDNFQPIGDDPARSEKIRESVLEELRLVSGYRDVVSRRTPRQ 799
Query: 125 -------------------HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRM 165
HT +E+ DRPGLL+ + V D+ + A++ T R+
Sbjct: 800 LKQFAVPTRTYISNDIVSGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERV 859
Query: 166 ASVVYITSEATGLPIDDPDTLAKIKR 191
+ +I S+ G P+ DP+ A++++
Sbjct: 860 EDIFFI-SDIEGNPLSDPNLCAELQK 884
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETI-ES 398
LE+ DR GLL+ + R+F + + + A+++T G + ++F++ D GNP+ +
Sbjct: 822 LEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISDIEGNPLSDPNLCAE 881
Query: 399 VRKEIGLTI-LRVKDD 413
++KEI + LRV+ D
Sbjct: 882 LQKEICKQLDLRVEKD 897
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P R + N T+++V S ++ G L + +V D+D+ ++ A IS+ GE D+F +
Sbjct: 806 PTRTYISNDIVSGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFI 865
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
+D GN LS+ ++ +Q+ +
Sbjct: 866 SDIEGNPLSDPNLCAELQKEI 886
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 73/193 (37%), Gaps = 32/193 (16%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTH-NSRMASVVYITSEATGLPIDDPD 184
T I + +D P + + V L+ N+ A V++ N A Y+ + DDP
Sbjct: 710 TQIFVRVKDAPHVFTAVANALAQQNLNIQDARVYSAANGYTADTFYVLDDNFQPIGDDPA 769
Query: 185 TLAKIKRLLLYVLK---GDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
KI+ +L L+ G RD S T R+L Q R Y N SG
Sbjct: 770 RSEKIRESVLEELRLVSGYRDVVSRRTP---------RQLKQFAVPTRTYISNDIVSG-- 818
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+TV+ + PDRP LL DM + +A +
Sbjct: 819 -----------------HTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVED 861
Query: 302 EYYIRHVDGNPIS 314
++I ++GNP+S
Sbjct: 862 IFFISDIEGNPLS 874
>gi|443623838|ref|ZP_21108327.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443342703|gb|ELS56856.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 815
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV+V ++R AT+I+V + + G L + + L D + +R A++S+ G +D F+V
Sbjct: 730 PPRVSVHPAASRLATVIEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYV 789
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T G L ++ V+ +++++L
Sbjct: 790 TGPEGAPLPSEEAASVARKLEETL 813
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + + V A V+T G+ AV+ FYV G P+ SE SV
Sbjct: 746 IEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYVTGPEGAPLPSEEAASV 805
Query: 400 RKEIGLTI 407
+++ T+
Sbjct: 806 ARKLEETL 813
>gi|386265651|ref|YP_005829143.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
gi|309972887|gb|ADO96088.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
Length = 863
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
++G + + R Q + L++ + E
Sbjct: 735 ELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFIVQTDVRFLHENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+ GLL+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 69 ISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL----- 123
I++ + D F +T+ NG +L E D ++Q+L +S + S+ L
Sbjct: 720 ITTQDGYVFDSFIITELNG-ELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFIV 778
Query: 124 ------------EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
EHT +EL D+PGLL++V + ++L N++ A++ T + A +I
Sbjct: 779 QTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK-AEDFFI 837
Query: 172 TSEATGLPID 181
+ G +D
Sbjct: 838 LTNQFGQALD 847
>gi|15602325|ref|NP_245397.1| PII uridylyl-transferase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|22256767|sp|Q9CNH1.1|GLND_PASMU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|12720715|gb|AAK02544.1| GlnD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 864
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEA 299
A +++ LV + + +G T + + C D+P L V T+ ++ ++ A +I +
Sbjct: 667 ADNQTELLVKISNRFSEGGTEIFVYCQDQPNLFHKVVTTIGAKKFSIHDAQIITSHDGYV 726
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAA---------------------------IKR 332
+ + I +DG + + R ++A +K
Sbjct: 727 FDSFIITELDGKLVKFDRRRSLEKALMQALNTSKLPTFRATDNPKLQHFHVKTEVRFLKE 786
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+ ++ +EL D+ GLL+ V+++F E L++ A++TT G +A + F + ++ +
Sbjct: 787 QRTDQTEMELFALDQTGLLAKVSQVFSELKLNLLNAKITTIGEKAEDFFILTNSEDRALT 846
Query: 393 SE 394
+E
Sbjct: 847 AE 848
>gi|218782918|ref|YP_002434236.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
gi|218764302|gb|ACL06768.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
Length = 893
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID---DP 183
T+ + +DRPGL S++ VL+ N+ A+++T + A ++ S P+D +
Sbjct: 684 TVTVCAKDRPGLFSKIAGVLTLNNLNIFDAQIFTWRNHTAMDIFQVSP----PLDSLFEK 739
Query: 184 DTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASG 243
T +++R L VL G+ D + A D + ++ SAS
Sbjct: 740 RTWQRVERDLGKVLSGEMD---------------------LSKALEDKPVAKSDDNSASA 778
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY 303
+ V+V++ + +T+V + D+ LL+ L ++ A + ++ + +
Sbjct: 779 LRRERVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVF 838
Query: 304 YIRHVDG----NPISSEAERQRVINCLEAAIKRRTSEGI 338
Y+R DG +P S +A +Q V+ L R ++G+
Sbjct: 839 YVRDFDGQKVDSPESVDAIKQTVLETLHG---ERNNKGV 874
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS-ETIES 398
+E+ D+ GLL +T GL + A++ T+ Q V+VFYV D G V S E++++
Sbjct: 797 VEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRDFDGQKVDSPESVDA 856
Query: 399 VRKEI 403
+++ +
Sbjct: 857 IKQTV 861
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
RV+VDN S+ T+++V + ++ G L ++ L L I A I++ + +DVF+V D
Sbjct: 783 RVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRD 842
Query: 85 QNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAA 122
+G K+ + + I+Q++ + R + GV+ A
Sbjct: 843 FDGQKVDSPESVDAIKQTV---LETLHGERNNKGVKPA 877
>gi|386834426|ref|YP_006239742.1| protein-P-II uridylyltransferase [Pasteurella multocida subsp.
multocida str. 3480]
gi|385201128|gb|AFI45983.1| protein-P-II uridylyltransferase [Pasteurella multocida subsp.
multocida str. 3480]
Length = 864
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEA 299
A +++ LV + + +G T + + C D+P L V T+ ++ ++ A +I +
Sbjct: 667 ADNQTELLVKISNRFSEGGTEIFVYCQDQPNLFHKVVTTIGAKKFSIHDAQIITSHDGYV 726
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAA---------------------------IKR 332
+ + I +DG + + R ++A +K
Sbjct: 727 FDSFIITELDGKLVKFDRRRSLEKALMQALNTSKLPTFRATHNPKLQHFHVKTEVRFLKE 786
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+ ++ +EL D+ GLL+ V+++F E L++ A++TT G +A + F + ++ +
Sbjct: 787 QRTDQTEMELFALDQTGLLAKVSQVFSELKLNLLNAKITTIGEKAEDFFILTNSEDRALT 846
Query: 393 SE 394
+E
Sbjct: 847 AE 848
>gi|378774172|ref|YP_005176415.1| [protein-PII] uridylyltransferase [Pasteurella multocida 36950]
gi|383310096|ref|YP_005362906.1| PII uridylyl-transferase [Pasteurella multocida subsp. multocida
str. HN06]
gi|356596720|gb|AET15446.1| [protein-PII] uridylyltransferase [Pasteurella multocida 36950]
gi|380871368|gb|AFF23735.1| PII uridylyl-transferase [Pasteurella multocida subsp. multocida
str. HN06]
Length = 864
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEA 299
A +++ LV + + +G T + + C D+P L V T+ ++ ++ A +I +
Sbjct: 667 ADNQTELLVKISNRFSEGGTEIFVYCQDQPNLFHKVVTTIGAKKFSIHDAQIITSHDGYV 726
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAA---------------------------IKR 332
+ + I +DG + + R ++A +K
Sbjct: 727 FDSFIITELDGKLVKFDRRRSLEKALMQALNTSKLPTFRATHNPKLQHFHVKTEVRFLKE 786
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+ ++ +EL D+ GLL+ V+++F E L++ A++TT G +A + F + ++ +
Sbjct: 787 QRTDQTEMELFALDQTGLLAKVSQVFSELKLNLLNAKITTIGEKAEDFFILTNSEDRALT 846
Query: 393 SE 394
+E
Sbjct: 847 AE 848
>gi|417855496|ref|ZP_12500616.1| PII uridylyl-transferase [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|338216069|gb|EGP02254.1| PII uridylyl-transferase [Pasteurella multocida subsp. multocida
str. Anand1_goat]
Length = 864
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEA 299
A +++ LV + + +G T + + C D+P L V T+ ++ ++ A +I +
Sbjct: 667 ADNQTELLVKISNRFSEGGTEIFVYCQDQPNLFHKVVTTIGAKKFSIHDAQIITSHDGYV 726
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAA---------------------------IKR 332
+ + I +DG + + R ++A +K
Sbjct: 727 FDSFIITELDGKLVKFDRRRSLEKALMQALNTSKLPTFRATHNPKLQHFHVKTEVRFLKE 786
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+ ++ +EL D+ GLL+ V+++F E L++ A++TT G +A + F + ++ +
Sbjct: 787 QRTDQTEMELFALDQTGLLAKVSQVFSELKLNLLNAKITTIGEKAEDFFILTNSEDRALT 846
Query: 393 SE 394
+E
Sbjct: 847 AE 848
>gi|85375192|ref|YP_459254.1| PII uridylyl-transferase [Erythrobacter litoralis HTCC2594]
gi|122543574|sp|Q2N784.1|GLND_ERYLH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84788275|gb|ABC64457.1| uridylyltransferase [Erythrobacter litoralis HTCC2594]
Length = 919
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV DN ++ + T+I+V++ ++ L L + L + +I++ A+I++ GE D F+VT
Sbjct: 825 PRVLFDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVT 884
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G K++++ + I+Q+L
Sbjct: 885 DLTGAKITDESRMDTIRQAL 904
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DRA LL+ + R EN + V A +T G +A + FYV D +G + E+ +++
Sbjct: 840 IEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTDLTGAKITDESRMDT 899
Query: 399 VRKEI 403
+R+ +
Sbjct: 900 IRQAL 904
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 34 RKATLIKVDSANKRGSLLELVQVLN--DLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLS 91
R ATL+ V +A+ G + ++ ++I R + + +G W +D + V D G +
Sbjct: 724 RGATLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRNG-WAIDNYLVQDPVGQPFA 782
Query: 92 EDDVSERIQQSLG--------------------PRARSFRSLRRSV-GVQAALEHTTIEL 130
E+ RI+Q++ RA +F R + A+ T IE+
Sbjct: 783 EERQLARIEQAIADAIANRGELVPKLAKRPLKQTRAGAFDVRPRVLFDNDASGRFTVIEV 842
Query: 131 TGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIK 190
RDR LL+ + L + + V A + + R A Y+T + TG I D + I+
Sbjct: 843 NARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVT-DLTGAKITDESRMDTIR 901
Query: 191 RLLL 194
+ LL
Sbjct: 902 QALL 905
>gi|393762684|ref|ZP_10351310.1| uridylyltransferase [Alishewanella agri BL06]
gi|392606306|gb|EIW89191.1| uridylyltransferase [Alishewanella agri BL06]
Length = 874
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEY 303
++PLV V KG T V + D+ L V L + +Y A ++ + A +
Sbjct: 676 NEPLVLVSKAPIKGGTQVFVYTRDQAGLFARMVAALDSKKVNIYDAQIMTNKDGFAMDTF 735
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRR-----------------------------T 334
I +G ++S + +Q + LE I + T
Sbjct: 736 VILEQNGEAVTSPSRQQSIKKALEQFIAGKPDLSRQKPRLSRQMRQFSVPPKVVFLPGNT 795
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
LE+ D GLL D+ ++F++ G+++ A++TT G +A + F + +A+ + + +E
Sbjct: 796 KHRTMLEIAALDTPGLLCDLGQVFQQCGVNIHAAKITTIGERAEDFFLISNAADDALTAE 855
Query: 395 TIESVRKEI 403
+++ +
Sbjct: 856 QQSELKRSL 864
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVF 80
N P V V + T + V + ++ G +V L+ + I A I ++ + F MD F
Sbjct: 676 NEPLVLVSKAPIKGGTQVFVYTRDQAGLFARMVAALDSKKVNIYDAQIMTNKDGFAMDTF 735
Query: 81 HVTDQNGNKLSEDDVSERIQQSL-------------GPR----ARSFRSLRRSVGVQAAL 123
+ +QNG ++ + I+++L PR R F + V +
Sbjct: 736 VILEQNGEAVTSPSRQQSIKKALEQFIAGKPDLSRQKPRLSRQMRQFSVPPKVVFLPGNT 795
Query: 124 EH-TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+H T +E+ D PGLL ++ V N+ A++ T R I++ A
Sbjct: 796 KHRTMLEIAALDTPGLLCDLGQVFQQCGVNIHAAKITTIGERAEDFFLISNAA 848
>gi|425065231|ref|ZP_18468351.1| [Protein-PII] uridylyltransferase [Pasteurella multocida subsp.
gallicida P1059]
gi|404384422|gb|EJZ80862.1| [Protein-PII] uridylyltransferase [Pasteurella multocida subsp.
gallicida P1059]
Length = 864
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEA 299
A +++ LV + + +G T + + C D+P L V T+ ++ ++ A +I +
Sbjct: 667 ADNQTELLVKISNRFSEGGTEIFVYCQDQPNLFHKVVTTIGAKKFSIHDAQIITSHDGYV 726
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAA---------------------------IKR 332
+ + I +DG + + R ++A +K
Sbjct: 727 FDSFIITELDGKLVKFDRRRSLEKALMQALNTSKLPTFRATHNPKLQHFHVKTEVRFLKE 786
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+ ++ +EL D+ GLL+ V+++F E L++ A++TT G +A + F + ++ +
Sbjct: 787 QRTDQTEMELFALDQTGLLAKVSQVFSELKLNLLNAKITTIGEKAEDFFILTNSEDRALT 846
Query: 393 SE 394
+E
Sbjct: 847 AE 848
>gi|339018851|ref|ZP_08644974.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
gi|338752065|dbj|GAA08278.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
Length = 983
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 14 FEKLVLRMN----PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI 69
F + LRM PPRV +DN ++ T+I+++ ++ G L ++ +++ +L I A+I
Sbjct: 869 FGHMPLRMRAIHVPPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHI 928
Query: 70 SSDGEWFMDVFHVTDQNGNKLSE----DDVSERI 99
++ G +DVF+V D G K+++ D++ +R+
Sbjct: 929 TTYGVRAVDVFYVKDLFGLKITDKKRLDEIRDRL 962
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+ GRDRPGLL +V A +S+ + A + T+ R V Y+ + GL I D
Sbjct: 895 YTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKK 953
Query: 185 TLAKIKRLLL 194
L +I+ LL
Sbjct: 954 RLDEIRDRLL 963
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG 388
+E+ DR GLL DVT E L + A +TT G +AV+VFYV D G
Sbjct: 898 IEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKDLFG 946
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 74/197 (37%), Gaps = 25/197 (12%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PGL S++ L+ +++ A + T MA + + G ++ LA++ L+
Sbjct: 791 DVPGLFSKIAGALALAGASIVDARIHTMMHGMALDTFWIQDTAGSAYEETHRLARLSSLI 850
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
L G D H R+ + P V +++
Sbjct: 851 EQALSGQLD--IGTEIARAGFGHMPLRMRAI-------------------HVPPRVVIDN 889
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
YTV+ + DRP LL D +++ + A + A +Y++ + G I
Sbjct: 890 GASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKDLFGLKI 949
Query: 314 SSEAE----RQRVINCL 326
+ + R R+++C+
Sbjct: 950 TDKKRLDEIRDRLLSCM 966
>gi|433647047|ref|YP_007292049.1| (protein-PII) uridylyltransferase [Mycobacterium smegmatis JS623]
gi|433296824|gb|AGB22644.1| (protein-PII) uridylyltransferase [Mycobacterium smegmatis JS623]
Length = 835
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 50/204 (24%)
Query: 262 VNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQR 321
V + PD LL A L V+ A+V A + + G+P ++E RQ+
Sbjct: 639 VTMIAPDVRGLLSKAAGVLALNSLRVHSASVNGHQGSAINSFVVSPHFGSPPAAELLRQQ 698
Query: 322 VINCLEAAI-----------------KRRTSE-------------------------GIS 339
I LE + RR E +
Sbjct: 699 FILALEGELDVMSSLDKRDGDAAQHSTRRAGEVPDAVPINHATAPPKILWTDGTEPGELV 758
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+++ DRAGLL+ +T +F +G+ + A+VTT GS V+VF +V ASG+ +S+
Sbjct: 759 VQIRATDRAGLLARLTAVFERDGMDIAWAKVTTLGSSVVDVFGIV-ASGH-------DSI 810
Query: 400 RKEIGLTILRVKDDAYSKSPPQES 423
R+E+ + V S P E+
Sbjct: 811 REELEHDLYAVLPAPASAKPVSEA 834
>gi|421853162|ref|ZP_16285841.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478622|dbj|GAB31044.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 996
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+ GRDRPGLL +V A +S + A + T+ R V Y+ + GL I D
Sbjct: 908 YTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKK 966
Query: 185 TLAKIKRLLLYVLK 198
L +I+ LL LK
Sbjct: 967 RLEEIRERLLAGLK 980
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 14 FEKLVLRMN----PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI 69
F + +RM PPRV +DN + T+I+++ ++ G L ++ ++ +L I A+I
Sbjct: 882 FGHMPMRMRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHI 941
Query: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
++ G +DVF+V D G K+++ E I++ L
Sbjct: 942 TTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERL 975
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DR GLL DVT L + A +TT G +AV+VFYV D G + + +E
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 399 VRKEI 403
+R+ +
Sbjct: 971 IRERL 975
>gi|421849578|ref|ZP_16282556.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
gi|371459639|dbj|GAB27759.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
Length = 996
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+ GRDRPGLL +V A +S + A + T+ R V Y+ + GL I D
Sbjct: 908 YTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKK 966
Query: 185 TLAKIKRLLLYVLK 198
L +I+ LL LK
Sbjct: 967 RLEEIRERLLAGLK 980
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 14 FEKLVLRMN----PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI 69
F + +RM PPRV +DN + T+I+++ ++ G L ++ ++ +L I A+I
Sbjct: 882 FGHMPMRMRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHI 941
Query: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
++ G +DVF+V D G K+++ E I++ L
Sbjct: 942 TTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERL 975
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DR GLL DVT L + A +TT G +AV+VFYV D G + + +E
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 399 VRKEI 403
+R+ +
Sbjct: 971 IRERL 975
>gi|258542748|ref|YP_003188181.1| PII uridylyl-transferase [Acetobacter pasteurianus IFO 3283-01]
gi|384042669|ref|YP_005481413.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
gi|384051186|ref|YP_005478249.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|384054294|ref|YP_005487388.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|384057528|ref|YP_005490195.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|384060169|ref|YP_005499297.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|384063461|ref|YP_005484103.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|384119471|ref|YP_005502095.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633826|dbj|BAH99801.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01]
gi|256636885|dbj|BAI02854.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|256639938|dbj|BAI05900.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|256642994|dbj|BAI08949.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|256646049|dbj|BAI11997.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|256649102|dbj|BAI15043.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|256652089|dbj|BAI18023.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655146|dbj|BAI21073.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
Length = 996
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+ GRDRPGLL +V A +S + A + T+ R V Y+ + GL I D
Sbjct: 908 YTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKK 966
Query: 185 TLAKIKRLLLYVLK 198
L +I+ LL LK
Sbjct: 967 RLEEIRERLLAGLK 980
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 14 FEKLVLRMN----PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI 69
F + +RM PPRV +DN + T+I+++ ++ G L ++ ++ +L I A+I
Sbjct: 882 FGHMPMRMRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHI 941
Query: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
++ G +DVF+V D G K+++ E I++ L
Sbjct: 942 TTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERL 975
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DR GLL DVT L + A +TT G +AV+VFYV D G + + +E
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 399 VRKEI 403
+R+ +
Sbjct: 971 IRERL 975
>gi|329114652|ref|ZP_08243411.1| uridylyltransferase [Acetobacter pomorum DM001]
gi|326696132|gb|EGE47814.1| uridylyltransferase [Acetobacter pomorum DM001]
Length = 996
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
+T IE+ GRDRPGLL +V A +S + A + T+ R V Y+ + GL I D
Sbjct: 908 YTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV-KDLFGLKITDKK 966
Query: 185 TLAKIKRLLLYVLK 198
L +I+ LL LK
Sbjct: 967 RLEEIRERLLAGLK 980
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 14 FEKLVLRMN----PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI 69
F + +RM PPRV +DN + T+I+++ ++ G L ++ ++ +L I A+I
Sbjct: 882 FGHMPMRMRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHI 941
Query: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
++ G +DVF+V D G K+++ E I++ L
Sbjct: 942 TTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERL 975
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+E+ DR GLL DVT L + A +TT G +AV+VFYV D G + + +E
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 399 VRKEI 403
+R+ +
Sbjct: 971 IRERL 975
>gi|357503663|ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
+PGL E+ A L++L CNV+ AE+WTHN + +VV++T++
Sbjct: 854 KPGLRYEIPAFLTELHCNVVAAEMWTHNDKAETVVHVTND 893
>gi|407716269|ref|YP_006837549.1| UTP-GlnB (Protein PII) uridylyltransferase, GlnD [Cycloclasticus
sp. P1]
gi|407256605|gb|AFT67046.1| UTP-GlnB (Protein PII) uridylyltransferase, GlnD [Cycloclasticus
sp. P1]
Length = 878
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQEYYI 305
PLV + T +G + + DR TL + + A +I + + A +++
Sbjct: 678 PLVLLRPQTHRGGAEIFIYVDDRAGTFAICTATLDQLGLNILDARIITTNEDLALISFHV 737
Query: 306 RHVDGNPISSEAERQRVINCLEAAI-------------KRRTSEGIS------------- 339
+G+PI Q ++N L A + + R S+ +
Sbjct: 738 LEDNGSPIPDLTREQSIVNVLRANLIAPDQSVLSVDRHRPRQSQHFNIKTTISFKSDYQK 797
Query: 340 ----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK-SE 394
LE+ +D+ G+LS + + F ++V A++TT GS A ++FY+ D+ ++ SE
Sbjct: 798 RYTILEIRTQDQPGVLSTIGQCFSACKVNVRNAKITTLGSTAEDIFYITDSDNKMIEDSE 857
Query: 395 TIESVRKEI 403
I+ +++ +
Sbjct: 858 IIDQLKESL 866
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V + ++R I + ++ G+ L+ L L I A I+++ + + FHV
Sbjct: 678 PLVLLRPQTHRGGAEIFIYVDDRAGTFAICTATLDQLGLNILDARIITTNEDLALISFHV 737
Query: 83 TDQNGNKLSEDDVSERIQQSLG-----------------PRARSFRSLRRSVGVQAALE- 124
+ NG+ + + + I L PR +++ ++ ++ +
Sbjct: 738 LEDNGSPIPDLTREQSIVNVLRANLIAPDQSVLSVDRHRPRQSQHFNIKTTISFKSDYQK 797
Query: 125 -HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
+T +E+ +D+PG+LS + S K NV A++ T S + YIT + I+D
Sbjct: 798 RYTILEIRTQDQPGVLSTIGQCFSACKVNVRNAKITTLGSTAEDIFYITDSDNKM-IEDS 856
Query: 184 DTLAKIKRLLL 194
+ + ++K L+
Sbjct: 857 EIIDQLKESLI 867
>gi|297815750|ref|XP_002875758.1| hypothetical protein ARALYDRAFT_323253 [Arabidopsis lyrata subsp.
lyrata]
gi|297321596|gb|EFH52017.1| hypothetical protein ARALYDRAFT_323253 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYIS--SDGEWFMDVFHVT 83
VT DN+ + TL+++ + RG L ++++ L D D+ I S + G W +D+F +
Sbjct: 203 VTFDNSLSPANTLLQIQCVDHRGLLYDVLRTLKDFDIKISYGRFSPQTQGHWDLDLF-IQ 261
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAA----LEHTTIELTGRDRPGLL 139
++GNK+ + D + L +A LR + + L +EL+G+ RP +
Sbjct: 262 LKDGNKIVDLDKQNSLCSRL--KAEMLHPLRVIITNRGPDAELLVANPVELSGKGRPRVF 319
Query: 140 SEVFAVLSDLKCNVMGAEV 158
+V L L + AE+
Sbjct: 320 YDVTLSLKVLGICIFSAEI 338
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 150/353 (42%), Gaps = 40/353 (11%)
Query: 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW-FMDVFHVTDQNGNKLSEDD 94
A +I V+ ++ G ++ +++ D L I + +++DG W ++ ++ V + +L
Sbjct: 8 AHVITVNCPDRTGLGCDICRIILDFGLYITKGDVTTDGVWCYIVLWVVPHYDTLRLRWSH 67
Query: 95 VSERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVM 154
+ ++ S+ P ++ L A+ ++ DR GLL +V VL++L+ ++
Sbjct: 68 LKNQLV-SVCPSCSTYFVLNLMSPCPASTPVYLLKFFCLDRNGLLHDVTQVLTELELSIQ 126
Query: 155 GAEVWTH-NSRMASVVYITSEATGLPID--DPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
+V T + R+ + +IT L + +T K + +L + +
Sbjct: 127 TVKVTTTPDGRVLDLFFITDNMDLLHTEKRQEETRGKFRSVL----------GESCISCE 176
Query: 212 VDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPK 271
+ E HQ + +D DM ++ S VT ++ T++ ++C D
Sbjct: 177 LQLAGPEYECHQNVLSD---DMTKLKNVS--------VTFDNSLSPANTLLQIQCVDHRG 225
Query: 272 LLFDAVCTLTDMQYVVYHATVIAESPEAYQ-EYYIRHVDGNPI------SSEAERQR--V 322
LL+D + TL D + + ++ + + +I+ DGN I +S R + +
Sbjct: 226 LLYDVLRTLKDFDIKISYGRFSPQTQGHWDLDLFIQLKDGNKIVDLDKQNSLCSRLKAEM 285
Query: 323 INCLEAAIKRRTSEGISL-----ELCCEDRAGLLSDVTRIFRENGLSVTRAEV 370
++ L I R + L EL + R + DVT + G+ + AE+
Sbjct: 286 LHPLRVIITNRGPDAELLVANPVELSGKGRPRVFYDVTLSLKVLGICIFSAEI 338
>gi|254282307|ref|ZP_04957275.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
gi|219678510|gb|EED34859.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
Length = 440
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 33/182 (18%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA-YQE 302
PLV V D T + + D+P+LL L + ++ A + + A
Sbjct: 239 PLVLVRHPLDSPVANTTQIFVHAQDKPELLVRICIELELLHLSIHDARIYTGTDGATLNT 298
Query: 303 YYIRHVDGNPISS-EAERQRVINCLEAAIK--------RRTSEGIS-------------- 339
+Y+ + DG+PI+S EA + + +E + RRT +
Sbjct: 299 FYVLNSDGSPIASDEANLDYIRSSIETGLASNKSRSSTRRTPRQLKSFVMPTETHIRQDL 358
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LE+ DR GLL+ + +F ++G+++ A++ T G + +VF+V D G + +
Sbjct: 359 DRGWTILEVATPDRPGLLARLGALFIDHGVALQSAKIQTLGERVEDVFFVTDMQGRALTN 418
Query: 394 ET 395
T
Sbjct: 419 NT 420
>gi|296448846|ref|ZP_06890683.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
gi|296253644|gb|EFH00834.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
Length = 896
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P + +DN+ + AT+I+V ++ G L +L +++L+L I A+I + GE +D F+VT
Sbjct: 793 PDIVIDNSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVT 852
Query: 84 DQNGNKL----SEDDVSERIQQSLGPRARSFRSLRRSVG 118
D G K+ + + ++ + P AR R+ R G
Sbjct: 853 DLTGGKILSASRQATIKRQLLEVFAP-AREKRARAREAG 890
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE++G DR GLL ++ +S+L N+ A + T R Y+T + TG I
Sbjct: 806 TVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVT-DLTGGKILSASR 864
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
A IKR LL V R+KR+
Sbjct: 865 QATIKRQLLEVFAPAREKRA 884
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL D+T L++ A + T G +AV+ FYV D +G + S + ++
Sbjct: 808 IEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVTDLTGGKILSASRQAT 867
Query: 400 RK 401
K
Sbjct: 868 IK 869
>gi|238918771|ref|YP_002932285.1| protein-P-II uridylyltransferase, putative [Edwardsiella ictaluri
93-146]
gi|238868339|gb|ACR68050.1| protein-P-II uridylyltransferase, putative [Edwardsiella ictaluri
93-146]
Length = 884
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 35/194 (18%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--QEYY 304
PLV V +G T + + PDRP L F AV D + + H I + + Y +
Sbjct: 689 PLVLVSQHATRGGTEIFIYSPDRPYL-FAAVAGELDRRNLSVHDAQIFTNRDNYAMDTFV 747
Query: 305 IRHVDGNPISSEAERQRVIN-CLEAAIKR-----------------------------RT 334
+ DGNP++ + R I LE A+ +
Sbjct: 748 VLEPDGNPLAPD--RHDTIRLALEHALTQPRYHPPRARRAPARLRHFSVPTEVSFLPAHN 805
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+ +EL DR GLL+ + IF E GLS+ A +TT G + ++F + D + +
Sbjct: 806 ARRSYMELVALDRPGLLAHIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALTPD 865
Query: 395 TIESVRKEIGLTIL 408
+ + + T+L
Sbjct: 866 MQRDLAQRLTETLL 879
>gi|357467939|ref|XP_003604254.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
gi|355505309|gb|AES86451.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
Length = 293
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 46/257 (17%)
Query: 85 QNGNKLSEDDVSERI---QQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSE 141
QNGN+ D V I Q L P A T +E+T DR G L +
Sbjct: 74 QNGNQGETDTVPTPIVIIDQDLDPDA------------------TVVEITFGDRLGALLD 115
Query: 142 VFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDR 201
L DL NV+ A V+ +S + IT TG ++DP+ L I+ ++ L
Sbjct: 116 TMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYH 175
Query: 202 DKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSAS--GRSKPLVTVESCTDKGY 259
+ S+ A+ ++ D++ A + S G + L VE+
Sbjct: 176 PESSSQLAMGA--------AFGLLPPKEQVDVDIATHINISDDGPDRSLFYVETA----- 222
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAER 319
DRP LL D V ++TD+ V E A ++++ + G IS +
Sbjct: 223 --------DRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSY-KGKAISKPLQ- 272
Query: 320 QRVINCLEAAIKRRTSE 336
Q + N L ++R +E
Sbjct: 273 QVLANSLRYFLRRPATE 289
>gi|168008130|ref|XP_001756760.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691998|gb|EDQ78357.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 30/177 (16%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V +D S+ +AT++++ ++ G+LL+ ++ L DL L + R ++++G F V
Sbjct: 7 PIVLIDQESDSEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGSRLRRKKFLV 66
Query: 83 TDQNGNKLSED-DVSERI-----------------QQSLGPRARSFRSLRRSVGVQAALE 124
T NK ED ++ E I Q ++G A S + + V A
Sbjct: 67 TRSANNKKVEDPELLEAIRLTIINNLLQYHPESSEQLAMG-VAFSDTPPKNQIDVDVA-T 124
Query: 125 HTTIELTGR---------DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
H T+ G DRPGLL E+ V+ D+ V AE+ T Y+T
Sbjct: 125 HVTVTREGSRSLLLVETADRPGLLLEILKVICDISIFVESAEIDTEGLIAKDKFYVT 181
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVY-ITSEATGLPIDD 182
E T +E++ DR G L + L DL NV+ V T SR+ + +T A ++D
Sbjct: 18 EATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGSRLRRKKFLVTRSANNKKVED 77
Query: 183 PDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSAS 242
P+ L I+ ++ L + S A+ V + + +Q+ D D+ + +
Sbjct: 78 PELLEAIRLTIINNLLQYHPESSEQLAMGVAFSDTPPK-NQI-----DVDVATHVTVTRE 131
Query: 243 GRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQE 302
G S+ L+ VE+ DRP LL + + + D+ V A + E A +
Sbjct: 132 G-SRSLLLVETA-------------DRPGLLLEILKVICDISIFVESAEIDTEGLIAKDK 177
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G+ +S E + + N L ++R +E
Sbjct: 178 FYVTY-HGDVLSKSME-EVLTNALRYYLRRPETE 209
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK-- 392
SE +E+ DR G L D + ++ GL+V R VTT GS+ ++V S N K
Sbjct: 17 SEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGSRLRRKKFLVTRSANNKKVE 76
Query: 393 -SETIESVRKEIGLTILRVKDD---------AYSKSPPQ 421
E +E++R I +L+ + A+S +PP+
Sbjct: 77 DPELLEAIRLTIINNLLQYHPESSEQLAMGVAFSDTPPK 115
>gi|260574117|ref|ZP_05842122.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
gi|259023583|gb|EEW26874.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
Length = 914
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + L+ + N++ A +T A+ V+ ++ G P + +A++ RL
Sbjct: 733 DHPGIFSRLAGALALVGANIVDARTYTSKDGYATAVFWVQDSEGRPYE----VARLPRL- 787
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
+G +D T K L + ADRD + R +T ++
Sbjct: 788 ----RG-----------MIDKTLKGEVLPREALADRDK----VKKREREFRFPTHITFDN 828
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ YT++ + DRP LL+D TL + A + + +Y++ + G +
Sbjct: 829 EGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDMFGLKL 888
Query: 314 SSEAERQRVINCLEAAIKRRTSEG 337
++A+++ LE +++ +EG
Sbjct: 889 HTKAKQE----ALETKLRQAIAEG 908
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +T DN + T+I+VD+ ++ G L +L + L ++ I A I++ G +D F+V
Sbjct: 821 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYV 880
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G KL E ++ L
Sbjct: 881 KDMFGLKLHTKAKQEALETKL 901
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASG----NPVKSET 395
+E+ DR GLL D+TR + + + A + T G+Q V+ FYV D G K E
Sbjct: 837 IEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDMFGLKLHTKAKQEA 896
Query: 396 IES 398
+E+
Sbjct: 897 LET 899
>gi|419801642|ref|ZP_14326857.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|419844393|ref|ZP_14367684.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
gi|385193249|gb|EIF40627.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|386417518|gb|EIJ31997.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
Length = 861
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 28/175 (16%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYIR 306
LV + + G T + + CPD+ L V T+ ++ ++ A ++ ++ + + I
Sbjct: 674 LVKISNRFSNGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDNFIIT 733
Query: 307 HVDGNPISSEAERQ----------------------RVINCLEAA-----IKRRTSEGIS 339
++G + SE R+ R + +K E
Sbjct: 734 ELNGELVRSERRRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKKEHTE 793
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
LE+ D+ GLL+ +++IF E L++ A++TT G +A + F + + G + E
Sbjct: 794 LEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKGIALTEE 848
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
EHT +E+ D+PGLL+++ + ++LK N+ A++ T + +T+E
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNE 840
>gi|417949099|ref|ZP_12592238.1| PII uridylyl-transferase [Vibrio splendidus ATCC 33789]
gi|342808707|gb|EGU43851.1| PII uridylyl-transferase [Vibrio splendidus ATCC 33789]
Length = 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP------- 297
S+PLV + +G T V + C D+ L V L + V+ A V+A
Sbjct: 677 SQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKDGHVLDTF 736
Query: 298 -----------EAYQEYYIRHV-----DGNPISSEAER----------QRVINCLEAAIK 331
EA + +H+ DG P + R + ++ L K
Sbjct: 737 IVLDQHGNAIDEARHKAVAKHLTHVLADGRPTKVKTRRTPRNLQHFKVKTLVEFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +EL D GLL+ V F E G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTGGRL 852
Query: 392 KSETIESVRKEI 403
E +S+R+ +
Sbjct: 853 SEEQEQSLRERL 864
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + V ++ +V L+ + + A + S DG +D F
Sbjct: 679 PLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKDGH-VLDTFI 737
Query: 82 VTDQNGNKLSE---DDVSERIQQSLG----PRARSFRSLR--RSVGVQAALEH------- 125
V DQ+GN + E V++ + L + ++ R+ R + V+ +E
Sbjct: 738 VLDQHGNAIDEARHKAVAKHLTHVLADGRPTKVKTRRTPRNLQHFKVKTLVEFLPTKSKK 797
Query: 126 -TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
T +EL D PGLL++V A ++L N+ GA++ T R + +TS+ G
Sbjct: 798 RTLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTGG 850
>gi|395771759|ref|ZP_10452274.1| PII uridylyl-transferase [Streptomyces acidiscabies 84-104]
Length = 813
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV + ++R AT+I+V + + G L + L D + +R ++S+ G +D F+V
Sbjct: 728 PPRVTVASAASRHATVIEVRAQDAPGLLFRIGAALEDSGVRVRSMHVSTLGANAVDAFYV 787
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T +G L D+ V+ ++++ L
Sbjct: 788 TSASGAPLPGDEAGAVARKLEEML 811
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + ++G+ V V+T G+ AV+ FYV ASG P+ + +V
Sbjct: 744 IEVRAQDAPGLLFRIGAALEDSGVRVRSMHVSTLGANAVDAFYVTSASGAPLPGDEAGAV 803
Query: 400 RKEI 403
+++
Sbjct: 804 ARKL 807
>gi|345865282|ref|ZP_08817470.1| [protein-PII] uridylyltransferase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345876936|ref|ZP_08828696.1| [protein-PII] uridylyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226044|gb|EGV52387.1| [protein-PII] uridylyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345123611|gb|EGW53503.1| [protein-PII] uridylyltransferase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 884
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 34/194 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
R PL+ + +G T V +R L + L + + +A +++ S + Y
Sbjct: 683 RELPLIAIRQTEHRGGTEVIYYGIERDNLFALSTTLLDQIGLSIVNARIMSTS-QGYSLN 741
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAA----------IKRR------------------ 333
+ + DG+P++ +++ + ++RR
Sbjct: 742 SFLVLEEDGSPVTPGERTDEILDSMRLGMSQTEADCFRVQRRIPRQHKSFDTPTRIFFSQ 801
Query: 334 --TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
T ++ L DR GLLS+V + F G+S+ A+++T G+Q ++F++ D P+
Sbjct: 802 DLTHHRTTMRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFITDRDKQPL 861
Query: 392 KSE-TIESVRKEIG 404
+ E +E +R+ I
Sbjct: 862 QEEQQLECLRRSIA 875
>gi|303251535|ref|ZP_07337709.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307252152|ref|ZP_07534051.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649533|gb|EFL79715.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860452|gb|EFM92466.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 850
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V V N R AT I + ++ L + Q+L+ + I A I+S +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 83 TDQNGNKLSEDDVSERIQQSL-------GPRARSF-------RSLRRSVGVQAALE---- 124
T+ NG L E+ E+I+QSL P+ + +S +R V+ ++
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLVDSQQN 777
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T EL DR GLL+ V +V + L N++ A++ T R+ +T++
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQ 827
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQE 302
R PLV V + +G T + + C D+ +L L+ + ++ A +I +++
Sbjct: 656 RIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDS 715
Query: 303 YYIRHVDGNPISS------EAERQRVINCLEAAI-------------KRRT--------- 334
+ + ++G P+ + ++V+N E + KR+T
Sbjct: 716 FIVTELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLVDSQ 775
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
+ EL DR GLL+ V+ +F + GL++ A++TT G + + F V
Sbjct: 776 QNRTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVV 824
>gi|390951027|ref|YP_006414786.1| (protein-PII) uridylyltransferase [Thiocystis violascens DSM 198]
gi|390427596|gb|AFL74661.1| (protein-PII) uridylyltransferase [Thiocystis violascens DSM 198]
Length = 894
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 32/189 (16%)
Query: 247 PLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYI 305
PLV + T +G T + + DR L L M V A V+ + A Y I
Sbjct: 695 PLVVIRPVTVRGVTEIFIYTRDRANLFARTTALLDQMGLSVMDARVMTTDDRMAINSYQI 754
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS-------------------------- 339
D P+ + + + L + I +T I
Sbjct: 755 LDQDCTPVDDPLRMEEIRSTLASDIVEQTCASIKVARSIPRRHRHFPIETRISFTADEPN 814
Query: 340 ----LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+ L DR GLL++V +F+ G+ + A++ T G++ +VF++ P+ ET
Sbjct: 815 RRTIMRLNTLDRPGLLAEVGAVFQSCGIRLQNAKIATVGAEVDDVFFITSGDDTPITCET 874
Query: 396 -IESVRKEI 403
+ +R+EI
Sbjct: 875 ALACLRREI 883
>gi|87307240|ref|ZP_01089385.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
gi|87289980|gb|EAQ81869.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
Length = 882
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 327 EAAIKRRTSEGISL-ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E I TSE S+ E+ +R GLL ++R + GLSV+ A++ T Q V+VFYV D
Sbjct: 792 EVKIDNGTSEQFSIVEVFAHNRVGLLYAISRAIFQLGLSVSIAKIATHLDQVVDVFYVSD 851
Query: 386 ASGNPVKSET-IESVRKEI 403
+G ++ E ++ +R+ +
Sbjct: 852 EAGEKIEDEQRLQEIREHL 870
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 51/90 (56%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P V +DN ++ + ++++V + N+ G L + + + L L + A I++ + +DVF+V
Sbjct: 790 PTEVKIDNGTSEQFSIVEVFAHNRVGLLYAISRAIFQLGLSVSIAKIATHLDQVVDVFYV 849
Query: 83 TDQNGNKLSEDDVSERIQQSLGPRARSFRS 112
+D+ G K+ ++ + I++ L FR+
Sbjct: 850 SDEAGEKIEDEQRLQEIREHLIDAVDEFRA 879
>gi|441145462|ref|ZP_20963771.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440621082|gb|ELQ84103.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 749
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV S++ AT+I+V + + +G L + + L + +R A++S+ G +D F+V
Sbjct: 664 PPRVTVAPGSSQSATVIEVRAQDAQGLLHRIGRALEAAGVTVRSAHVSTLGANAVDAFYV 723
Query: 83 TDQNGNKLSEDDVSERIQ 100
T + G L + +E Q
Sbjct: 724 TTEKGEPLPDAAATEVAQ 741
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R G++V A V+T G+ AV+ FYV G P+ V
Sbjct: 680 IEVRAQDAQGLLHRIGRALEAAGVTVRSAHVSTLGANAVDAFYVTTEKGEPLPDAAATEV 739
Query: 400 RKEI 403
+ +
Sbjct: 740 AQAV 743
>gi|421263194|ref|ZP_15714259.1| PII uridylyl-transferase [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401689939|gb|EJS85291.1| PII uridylyl-transferase [Pasteurella multocida subsp. multocida
str. P52VAC]
Length = 864
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEA 299
A +++ LV + + +G T + + C D+P L V T+ ++ ++ A +I +
Sbjct: 667 ADKQTELLVKISNRFSEGGTEIFVYCQDQPNLFHKVVTTIGAKKFSIHDAQIITSHDGYV 726
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAA---------------------------IKR 332
+ + I +DG + + R ++A +K
Sbjct: 727 FDSFIITELDGKLVKFDRRRSLEKALMQALNTSKLPTFRATHNPKLQHFHVKTEVRFLKE 786
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+ ++ +EL D+ GLL+ V+++F E L++ A++TT G +A + F + ++ +
Sbjct: 787 QRTDQTEMELFALDQTGLLAKVSQVFSELKLNLLNAKITTIGEKAEDFFILTNSEDRALT 846
Query: 393 SE 394
+E
Sbjct: 847 AE 848
>gi|403713835|ref|ZP_10939894.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
gi|403211941|dbj|GAB94577.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
Length = 792
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 38 LIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSE 97
L++V + ++ G + VL L +RRA +S+D +D +HV +G + ++ + E
Sbjct: 619 LVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHVESPSGAR-ADREALE 677
Query: 98 RIQQSLGPRARSFRSL----RRSVGV------------QAALEHTTIELTGRDRPGLLSE 141
R L R+ R L RR V V AA + T +EL DRPGLL +
Sbjct: 678 RAMLRL--RSGDRRGLAPLSRRPVPVPDAPVTRALLVPDAAADATVLELRATDRPGLLHD 735
Query: 142 VFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
V L+ L +V A V T+ + VY+T
Sbjct: 736 VGRCLAQLTVSVRSAHVATYCGQAVDTVYLT 766
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+G +E+ DR GL +D + +GLSV RA ++T A++ ++V SG E
Sbjct: 615 GDGQLVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHVESPSGARADRE 674
Query: 395 TIE 397
+E
Sbjct: 675 ALE 677
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 65/169 (38%), Gaps = 28/169 (16%)
Query: 261 VVNLRCPDRPKLLFDAVCTL-------------TDMQYVVYHATVIAESP-------EAY 300
+V + PDR L D L TD + H V ESP EA
Sbjct: 619 LVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHV--ESPSGARADREAL 676
Query: 301 QEYYIRHVDGNPISSEAERQRVINCLEAAIKRR------TSEGISLELCCEDRAGLLSDV 354
+ +R G+ +R + +A + R ++ LEL DR GLL DV
Sbjct: 677 ERAMLRLRSGDRRGLAPLSRRPVPVPDAPVTRALLVPDAAADATVLELRATDRPGLLHDV 736
Query: 355 TRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEI 403
R + +SV A V T QAV+ Y+ + G+ + + V + +
Sbjct: 737 GRCLAQLTVSVRSAHVATYCGQAVDTVYLTEPDGSQLAPARVAQVIRSL 785
>gi|238759952|ref|ZP_04621106.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
gi|238701859|gb|EEP94422.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
Length = 764
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 35/183 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
++PLV V +G T + + PDRP L F AV D + + H I + + A
Sbjct: 567 TQPLVLVSRQATRGGTEIFIWSPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 625
Query: 303 YYIRHVDGNPISSEAERQRVI-NCLEAAIK---------RRTSEGIS------------- 339
+ + DG+P++ + R +I L+ A+ RR S +
Sbjct: 626 FIVLEPDGSPLAQD--RHPIIRQALQQAMTQPNYQPPRVRRLSPKLRHFSVPTEANFLPT 683
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D +
Sbjct: 684 HNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLADKDRRALS 743
Query: 393 SET 395
ET
Sbjct: 744 IET 746
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ +V L+ +L + A I ++ + MD F V
Sbjct: 569 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 628
Query: 83 TDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRR--SVGVQAAL------EH 125
+ +G+ L++D + + +QQ++ PR R R SV +A
Sbjct: 629 LEPDGSPLAQDRHPIIRQALQQAMTQPNYQPPRVRRLSPKLRHFSVPTEANFLPTHNERR 688
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171
T +EL D+PGLL+ V + +DL ++ A + T R+ + +
Sbjct: 689 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVL 734
>gi|333983340|ref|YP_004512550.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
gi|333807381|gb|AEG00051.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
Length = 881
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 273 LFDAVCTLTDMQYVVYHATVIAESPEA----YQEYYI----------RHVDGNPISSEAE 318
+ DA T+ QYV+ V+ +S EA Y+E +I + + + +
Sbjct: 725 ILDARIITTEDQYVLNSFQVLEQSGEAINDLYREIHICDTLRQGLINKKANSSKNIHKQS 784
Query: 319 RQRVINCLEAAIK---RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGS 375
RQ +E ++ S+ ++EL DRAGLLS + + F + + + A++TT GS
Sbjct: 785 RQARHFPIETSVTFLDNPLSKHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGS 844
Query: 376 QAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDD 413
+A ++FYV D + P+ + E R + TILR D
Sbjct: 845 RAEDMFYVTDQNCQPI-VDAQEQAR--MSATILRYLSD 879
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V + + R + I V + N+ L+ L L I A I+++ ++ ++ F V
Sbjct: 685 PLVLLRPQTQRGSAEIFVYTRNEAQIFSICTATLDHLGLTILDARIITTEDQYVLNSFQV 744
Query: 83 TDQNGNKLS----EDDVSERIQQSL-GPRARSFRSLR------RSVGVQAAL-------- 123
+Q+G ++ E + + ++Q L +A S +++ R ++ ++
Sbjct: 745 LEQSGEAINDLYREIHICDTLRQGLINKKANSSKNIHKQSRQARHFPIETSVTFLDNPLS 804
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDP 183
+HTTIEL DR GLLS + + L ++ A++ T SR + Y+T + PI D
Sbjct: 805 KHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGSRAEDMFYVTDQNCQ-PIVDA 863
Query: 184 DTLAKIKRLLLYVL 197
A++ +L L
Sbjct: 864 QEQARMSATILRYL 877
>gi|92112694|ref|YP_572622.1| PII uridylyl-transferase [Chromohalobacter salexigens DSM 3043]
gi|91795784|gb|ABE57923.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Chromohalobacter
salexigens DSM 3043]
Length = 891
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+EL DR GLL+ V RIF E ++++ A++ T G + +VF++ D +G P+
Sbjct: 821 VELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGEPL 872
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 56 VLNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL---------GP 105
+ L L I A I +S +W ++ F V D +G + + E I+ L P
Sbjct: 729 AMEQLGLSIHDARIATSSNDWTLNTFIVLDDDGEPIRDPQRLEEIRHHLVEELDDPADYP 788
Query: 106 RA---------RSFRSLRRSVGVQ-AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R + F+ R V Q A T +ELT DRPGLL+ V + + +
Sbjct: 789 RIVTRHTSRQLKHFKVPTRVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSA 848
Query: 156 AEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
A++ T R+ V +IT +A G P+ DP+ A+++ L
Sbjct: 849 AKIATLGERVEDVFFITDKA-GEPLTDPERQARLRERL 885
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 46/81 (56%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P RV ++ + T++++ + ++ G L + ++ + D+ + A I++ GE DVF +
Sbjct: 805 PTRVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFI 864
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD+ G L++ + R+++ L
Sbjct: 865 TDKAGEPLTDPERQARLRERL 885
>gi|425063153|ref|ZP_18466278.1| [Protein-PII] uridylyltransferase [Pasteurella multocida subsp.
gallicida X73]
gi|404383269|gb|EJZ79724.1| [Protein-PII] uridylyltransferase [Pasteurella multocida subsp.
gallicida X73]
Length = 864
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEA 299
A +++ LV + + +G T + + C D+P L V T+ ++ ++ A +I +
Sbjct: 667 ADKQTELLVKISNRFSEGGTEIFVYCQDQPNLFHKVVTTIGAKKFSIHDAQIITSHDGYV 726
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAA---------------------------IKR 332
+ + I +DG + + R ++A +K
Sbjct: 727 FDSFIITELDGKLVKFDRRRSLEKALMQALNTSKLPTFRATHNPKLQHFHVKTEVRFLKE 786
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+ ++ +EL D+ GLL+ V+++F E L++ A++TT G +A + F + ++ +
Sbjct: 787 QRTDQTEMELFALDQTGLLAKVSQVFSELKLNLLNAKITTIGEKAEDFFILTNSEDRALT 846
Query: 393 SE 394
+E
Sbjct: 847 AE 848
>gi|325578503|ref|ZP_08148603.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325159739|gb|EGC71869.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 861
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 28/175 (16%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQEYYIR 306
LV + + G T + + CPD+ L V T+ ++ ++ A ++ ++ + + I
Sbjct: 674 LVKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIIT 733
Query: 307 HVDGNPISSEAERQ----------------------RVINCLEAA-----IKRRTSEGIS 339
++G + SE R+ R + +K E
Sbjct: 734 ELNGELVRSERRRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKKEHTE 793
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
LE+ D+ GLL+ +++IF E L++ A++TT G +A + F + + G + E
Sbjct: 794 LEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKGIALTEE 848
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
EHT +E+ D+PGLL+++ + ++LK N+ A++ T + +T+E
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNE 840
>gi|303252229|ref|ZP_07338397.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247572|ref|ZP_07529616.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302649012|gb|EFL79200.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855937|gb|EFM88096.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 850
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V V N R AT I + ++ L + Q+L+ + I A I+S +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 83 TDQNGNKLSEDDVSERIQQSL-------GPRARSF-------RSLRRSVGVQAALE---- 124
T+ NG L E+ E+I+QSL P+ + +S +R V+ ++
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLVDSQQN 777
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T EL DR GLL+ V +V + L N++ A++ T R+ +T++
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQ 827
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQE 302
R PLV V + +G T + + C D+ +L L+ + ++ A +I +++
Sbjct: 656 RIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDS 715
Query: 303 YYIRHVDGNPISS------EAERQRVINCLEAAI-------------KRRT--------- 334
+ + ++G P+ + ++V+N E + KR+T
Sbjct: 716 FIVTELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLVDSQ 775
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
+ EL DR GLL+ V+ +F + GL++ A++TT G + + F V
Sbjct: 776 QNRTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVV 824
>gi|170727622|ref|YP_001761648.1| PII uridylyl-transferase [Shewanella woodyi ATCC 51908]
gi|169812969|gb|ACA87553.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella woodyi ATCC 51908]
Length = 859
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 34/183 (18%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
+++PLV + T +G T + + D+PKL + L + V+ ATV+A S + Y
Sbjct: 660 QTEPLVLISKHTTRGGTELFIYGQDKPKLFATVMAVLDNKNIDVHDATVMA-SKDGYVLD 718
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIK------------------------------ 331
+ I DG P+S + Q + L A+
Sbjct: 719 SFVILEQDGTPVSQISRIQSLRKALIKALNSDTAKLPKFKKLSRQMKPFNVPTRVSFLPS 778
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
RR+S + +EL D GLL+ V I + + A++TT G +A + F + + G +
Sbjct: 779 RRSSTSM-MELIALDSPGLLAKVGDILYRCQIRLLAAKITTIGERAEDFFMLQNIDGEEL 837
Query: 392 KSE 394
SE
Sbjct: 838 NSE 840
>gi|331006419|ref|ZP_08329722.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
gi|330419719|gb|EGG94082.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
Length = 905
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 1 MDCWSSSFAVVDEFEKLVLRM---------NPPRVTVDNTSNRKATLIKVDSANKRGSLL 51
+D F++ D++ ++ R P R ++ N + + T+++V S ++ G L
Sbjct: 777 IDLLLEEFSIADKYSDIIKRRIPRQLKYFSAPTRTSIHNDISNEYTVLEVISPDRPGFLA 836
Query: 52 ELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
L ++L + ++ + A I++ GE D+F +TD +GN LS+ + E++Q ++
Sbjct: 837 RLARILVEYNIELVTAKITTLGERVEDIFFITDADGNPLSDPALCEQLQHAI 888
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
++E LE+ DR G L+ + RI E + + A++TT G + ++F++ DA GNP+
Sbjct: 818 SNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITDADGNPL 875
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 24 PRVTVDNTS---NRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI---SSDGEWFM 77
P V + ++S T I + + K+ +L+ +L I+ A I +S G M
Sbjct: 695 PLVIISDSSVLGEHAVTQIFIRADLKQNIFAATTTILDHFNLNIQSAQIHSATSSGH-TM 753
Query: 78 DVFHVTDQNGNKLSE-------------------DDVSERIQQSLGPRARSFRS-LRRSV 117
D F+V DQ+ + + D S+ I++ + + + F + R S+
Sbjct: 754 DTFYVLDQDDLPIGQNPEIVTQIIDLLLEEFSIADKYSDIIKRRIPRQLKYFSAPTRTSI 813
Query: 118 GVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
+ E+T +E+ DRPG L+ + +L + ++ A++ T R+ + +IT +A G
Sbjct: 814 HNDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFIT-DADG 872
Query: 178 LPIDDP 183
P+ DP
Sbjct: 873 NPLSDP 878
>gi|449439743|ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 292
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T +E+T DR G L + L +L NV+ A V+ +S + IT TG +DDP+
Sbjct: 99 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSITKADTGRKVDDPEL 158
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
L I+ ++ L + SA A+ + Q + D +N + G
Sbjct: 159 LEAIRLTIINNLIQYHPESSAQLAMG--AAFGVVPPKQQVDVDIATHINVQDDGP----D 212
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
+ L+ VE+ DRP LL D V +TD+ V E A ++++
Sbjct: 213 RSLLYVETA-------------DRPGLLVDLVKIITDINVAVESGEFDTEGLLAKAKFHV 259
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEGISL 340
+ G P+ + Q + N L ++R T+E S
Sbjct: 260 SY-RGKPLIKPLQ-QVISNSLRYFLRRPTTEEASF 292
>gi|383936728|ref|ZP_09990149.1| [protein-PII] uridylyltransferase [Rheinheimera nanhaiensis E407-8]
gi|383702156|dbj|GAB60240.1| [protein-PII] uridylyltransferase [Rheinheimera nanhaiensis E407-8]
Length = 874
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYY 304
+PLV + +G T V + D+PKL V L + ++ A ++ + A +
Sbjct: 677 EPLVLISKAPIRGGTQVFIYTKDQPKLFARLVAALDSKKVNIFDAQIMTNKDGYAMDTFV 736
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRR-----------------------------TS 335
I +G ++S + +Q + LE I + TS
Sbjct: 737 ILEQNGEAVNSPSRQQSIKRALELYIAGKPDLSRQKTKLSRQMRQFNVPPKVVFLPGNTS 796
Query: 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+ +EL D GLL+++ +F+ +++ A++TT G +A + F + ++ + SE
Sbjct: 797 KRTMIELAALDTPGLLANIGEVFQRCDVNIHAAKITTIGERAEDFFMISNSDDQALSSEQ 856
Query: 396 IESVRKEI 403
++++ +
Sbjct: 857 QSALKRAL 864
>gi|386823785|ref|ZP_10110927.1| PII uridylyl-transferase [Serratia plymuthica PRI-2C]
gi|386379325|gb|EIJ20120.1| PII uridylyl-transferase [Serratia plymuthica PRI-2C]
Length = 892
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 31/191 (16%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+A A +KPLV V +G T + + PDRP LF AV D + + H I
Sbjct: 685 HARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRP-YLFAAVAGEMDRRNLSVHDAQIF 743
Query: 295 ESPE--AYQEYYIRHVDGNPISSE---AERQRVINCL-----EAAIKRRTSEGIS----- 339
+ + A + + DG+P++ + A R ++ + + RR S +
Sbjct: 744 TNRDGMAMDTFIVLEPDGSPLAQDRHAAIRHALVQTITQREYQPPRVRRPSSKLRHFSVP 803
Query: 340 ---------------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVV 384
LEL D+ GLL+ V +F + GLS+ A ++T G + ++F +
Sbjct: 804 TEVSFLPTHTDRRSYLELTALDQPGLLARVGEVFADLGLSLHGARISTIGERVEDLFILA 863
Query: 385 DASGNPVKSET 395
D+ + ET
Sbjct: 864 DSDRRALNPET 874
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + S ++ + ++ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPYLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSED-----------DVSERIQQSLGPRARSFRSLRRSVGVQAALE----HT- 126
+ +G+ L++D +++R Q PR R S R V + HT
Sbjct: 757 LEPDGSPLAQDRHAAIRHALVQTITQREYQP--PRVRRPSSKLRHFSVPTEVSFLPTHTD 814
Query: 127 ---TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT-SEATGLPIDD 182
+ELT D+PGLL+ V V +DL ++ GA + T R+ + + S+ L +
Sbjct: 815 RRSYLELTALDQPGLLARVGEVFADLGLSLHGARISTIGERVEDLFILADSDRRAL---N 871
Query: 183 PDTLAKIKRLL 193
P+T K+++ L
Sbjct: 872 PETRRKLEQRL 882
>gi|359787446|ref|ZP_09290493.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
gi|359295263|gb|EHK59538.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
Length = 891
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ V RIF E ++++ A++ T G + +VF++ + +G P+
Sbjct: 821 LELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITNKAGEPL 872
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 57 LNDLDLIIRRAYI-SSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL------------ 103
+ L L I A I +S W ++ F V D G + + + E ++Q L
Sbjct: 730 MEQLGLSIHDARIATSHNNWTLNTFIVLDNVGQPIRDLERIEEMRQHLVEELDDPDDYPD 789
Query: 104 -----GPRARSFRSLRRSVGVQ--AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGA 156
PR + V ++ A E T +ELT DRPGLL+ V + + + A
Sbjct: 790 IVSRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSAA 849
Query: 157 EVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
++ T R+ V +IT++A G P+ DP+ +++ L+ VL
Sbjct: 850 KIATLGERVEDVFFITNKA-GEPLTDPERQQQLRERLIEVL 889
>gi|318080611|ref|ZP_07987943.1| PII uridylyl-transferase [Streptomyces sp. SA3_actF]
Length = 460
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
L + PPRV V ++ AT+I+V + + G L L Q L + + +R A+ S+ G +D
Sbjct: 372 LSVPPPRVRVAPAASHSATVIEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVD 431
Query: 79 VFHVTDQNGNKLSED---DVSERIQQSLG 104
F+VT +G L+ D ++ ++++LG
Sbjct: 432 AFYVTGPDGGPLAPDVASALAAELERTLG 460
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + + G+ V A +T G+ AV+ FYV G P+ + ++
Sbjct: 392 IEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVDAFYVTGPDGGPLAPDVASAL 451
Query: 400 RKEIGLTI 407
E+ T+
Sbjct: 452 AAELERTL 459
>gi|392376054|ref|YP_003207887.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Candidatus
Methylomirabilis oxyfera]
gi|258593747|emb|CBE70088.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
[Candidatus Methylomirabilis oxyfera]
Length = 932
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 22/189 (11%)
Query: 135 RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLL 194
R G ++V L+ N++ A+++T S M + G+ I+DP ++ L
Sbjct: 752 RHGRFAQVVGTLTASGMNILSAQIFTLASGMVIRHFRVDNGRGVAIEDPAVWDRVVADLQ 811
Query: 195 YVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPL-VTVES 253
VL G V+V K RR ++ + G P+ V ++
Sbjct: 812 EVLTG---------TVAVHDLIKSRRKEVLVRPIQ------------QGTVFPIKVEFDN 850
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPI 313
+ YTV+++R DR LL+ TL+ ++ + A + E+ + +Y+ + DG+ +
Sbjct: 851 LVSQAYTVLDIRTRDRLGLLYLITSTLSQLEVDIRSAKITTEAEQVVDVFYVTNKDGSKL 910
Query: 314 SSEAERQRV 322
E R ++
Sbjct: 911 IDEGRRAQI 919
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
P +V DN ++ T++ + + ++ G L + L+ L++ IR A I+++ E +DVF+V
Sbjct: 843 PIKVEFDNLVSQAYTVLDIRTRDRLGLLYLITSTLSQLEVDIRSAKITTEAEQVVDVFYV 902
Query: 83 TDQNGNKLSED 93
T+++G+KL ++
Sbjct: 903 TNKDGSKLIDE 913
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
L++ DR GLL +T + + + A++TT Q V+VFYV + G+ + E
Sbjct: 859 LDIRTRDRLGLLYLITSTLSQLEVDIRSAKITTEAEQVVDVFYVTNKDGSKLID---EGR 915
Query: 400 RKEIGLTILRVKDDAYS 416
R +IG+ + RV + ++
Sbjct: 916 RAQIGIELERVLAEGFN 932
>gi|398782192|ref|ZP_10546010.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
gi|396996929|gb|EJJ07908.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
Length = 836
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV+ S+R AT+I+V + + G L + + L + +R A+IS+ G +D F+V
Sbjct: 752 PPRVSAVTGSSRTATVIEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYV 811
Query: 83 TDQNGNKL 90
TD +G L
Sbjct: 812 TDPDGEPL 819
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+E+ +D GLL + R G++V A ++T G+ AV+ FYV D G P+
Sbjct: 768 IEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYVTDPDGEPL 819
>gi|254454604|ref|ZP_05068041.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
gi|198269010|gb|EDY93280.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
Length = 932
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 134 DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLL 193
D PG+ S + LS + NV+ A +T A+ + ++ G P ++ L ++++++
Sbjct: 751 DHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQDSDGTPFEE-TRLPRLRKMI 809
Query: 194 LYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVES 253
L GD R A +ADRD + + R +T ++
Sbjct: 810 ERTLHGDIVPREA-------------------FADRDK----IKKRERAFRVSTSITFDN 846
Query: 254 CTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDG 310
+ YT++ + DRP LL D TL + + A + + +Y++++ G
Sbjct: 847 EGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNMFG 903
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
+T DN + T+I+VD+ ++ G L +L + L + ++ I A I++ GE +D F+V +
Sbjct: 842 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNM 901
Query: 86 NGNKLSEDDVSERIQQSL 103
G K E + + +++ L
Sbjct: 902 FGLKYHEQEKCDALERKL 919
>gi|397169743|ref|ZP_10493173.1| uridylyltransferase [Alishewanella aestuarii B11]
gi|396088638|gb|EJI86218.1| uridylyltransferase [Alishewanella aestuarii B11]
Length = 874
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEY 303
++PLV V KG T V + D+ L V L + +Y A ++ + A +
Sbjct: 676 NEPLVLVSKAPIKGGTQVFVYTRDQAGLFARMVAALDSKKVNIYDAQIMTNKDGFAMDTF 735
Query: 304 YIRHVDGNPISSEAERQRVINCLEAAIKRR-----------------------------T 334
+ +G ++S + +Q + LE I + T
Sbjct: 736 VVLEQNGEAVTSPSRQQSIKKALEQFIAGKPDLSRQKPRLSRQMRQFSVPPKVVFLPGNT 795
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
LE+ D GLL D+ ++F++ G+++ A++TT G +A + F + +A+ + + +E
Sbjct: 796 KHRTMLEIAALDTPGLLCDLGQVFQQCGVNIHAAKITTIGERAEDFFLISNAADDALTAE 855
Query: 395 TIESVRKEI 403
+++ +
Sbjct: 856 QQSELKRSL 864
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 22 NPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVF 80
N P V V + T + V + ++ G +V L+ + I A I ++ + F MD F
Sbjct: 676 NEPLVLVSKAPIKGGTQVFVYTRDQAGLFARMVAALDSKKVNIYDAQIMTNKDGFAMDTF 735
Query: 81 HVTDQNGNKLSEDDVSERIQQSL-------------GPR----ARSFRSLRRSVGVQAAL 123
V +QNG ++ + I+++L PR R F + V +
Sbjct: 736 VVLEQNGEAVTSPSRQQSIKKALEQFIAGKPDLSRQKPRLSRQMRQFSVPPKVVFLPGNT 795
Query: 124 EH-TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
+H T +E+ D PGLL ++ V N+ A++ T R I++ A
Sbjct: 796 KHRTMLEIAALDTPGLLCDLGQVFQQCGVNIHAAKITTIGERAEDFFLISNAA 848
>gi|431930140|ref|YP_007243186.1| (protein-PII) uridylyltransferase [Thioflavicoccus mobilis 8321]
gi|431828443|gb|AGA89556.1| (protein-PII) uridylyltransferase [Thioflavicoccus mobilis 8321]
Length = 874
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 36/220 (16%)
Query: 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
Q A T I + RDR GL + A+L L N+M A + T++ M Y + G
Sbjct: 684 QTARGGTEIFIYTRDRQGLFARTTAMLDQLGLNIMDARILTNDDGMTLNSYQVLDQGGTQ 743
Query: 180 IDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESG 239
++D LA+I+ L+ VL A+ D + A
Sbjct: 744 VEDETRLAEIQGALVSVL-----------------------------AEHDPSLEVARRM 774
Query: 240 SASGRSKPLVT-VESCTDKG--YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAES 296
+ P+ T V TD+ TV+ L DRP LL + +A +
Sbjct: 775 PRQYKYFPIETKVTFTTDETNRRTVMRLTTLDRPGLLAAVGSVFETCGIRLSNAKIATIG 834
Query: 297 PEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
E ++I +G PI+ EA+ +NCL+ I R +
Sbjct: 835 AEVDDVFFITSPEGRPITCEAD----LNCLQEEIHRHLEQ 870
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 23/187 (12%)
Query: 16 KLVLRMNP---PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SS 71
+L+L +P P V + + R T I + + +++G +L+ L L I A I ++
Sbjct: 666 RLILAADPQDLPIVRIRPQTARGGTEIFIYTRDRQGLFARTTAMLDQLGLNIMDARILTN 725
Query: 72 DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL----------------GPRARSFRSLRR 115
D ++ + V DQ G ++ ++ IQ +L PR + +
Sbjct: 726 DDGMTLNSYQVLDQGGTQVEDETRLAEIQGALVSVLAEHDPSLEVARRMPRQYKYFPIET 785
Query: 116 SVGVQA--ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
V T + LT DRPGLL+ V +V + A++ T + + V +ITS
Sbjct: 786 KVTFTTDETNRRTVMRLTTLDRPGLLAAVGSVFETCGIRLSNAKIATIGAEVDDVFFITS 845
Query: 174 EATGLPI 180
G PI
Sbjct: 846 -PEGRPI 851
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IES 398
+ L DR GLL+ V +F G+ ++ A++ T G++ +VF++ G P+ E +
Sbjct: 800 MRLTTLDRPGLLAAVGSVFETCGIRLSNAKIATIGAEVDDVFFITSPEGRPITCEADLNC 859
Query: 399 VRKEI 403
+++EI
Sbjct: 860 LQEEI 864
>gi|297844622|ref|XP_002890192.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
gi|297336034|gb|EFH66451.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
Length = 290
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 26/164 (15%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V +D S+ AT+++V ++ G+LL+ + L +L L + +A + D + F +T
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 84 DQN-GNKLSEDDVSERIQQS-------LGPRARSFRSLRRSVGVQAALE--------HTT 127
+ G K+ + ++ E I+ + P + S ++ + GV E H T
Sbjct: 144 KADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 128 IELTG----------RDRPGLLSEVFAVLSDLKCNVMGAEVWTH 161
IE G DRPGLL E+ ++SD+ V E T
Sbjct: 204 IEDDGPNRSLLYIETADRPGLLVELVKIISDISVAVESGEFDTE 247
>gi|167950394|ref|ZP_02537468.1| UTP-GlnB uridylyltransferase, GlnD [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 346
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 34/194 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY--Q 301
R PL+ + +G T V +R L + L + + +A +++ S + Y
Sbjct: 145 RELPLIAIRQTEHRGGTEVIYYGIERDNLFALSTTLLDQIGLSIVNARIMSTS-QGYSLN 203
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAA----------IKRR------------------ 333
+ + DG+P++ +++ + ++RR
Sbjct: 204 SFLVLEEDGSPVTPGERTDEILDSMRLGMSQTEADCFRVQRRIPRQHKSFDTPTRIFFSQ 263
Query: 334 --TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
T ++ L DR GLLS+V + F G+S+ A+++T G+Q ++F++ D P+
Sbjct: 264 DLTHHRTTMRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFITDRDKQPL 323
Query: 392 KSE-TIESVRKEIG 404
+ E +E +R+ I
Sbjct: 324 QEEQQLECLRRSIA 337
>gi|256397098|ref|YP_003118662.1| UTP-GlnB uridylyltransferase, GlnD [Catenulispora acidiphila DSM
44928]
gi|256363324|gb|ACU76821.1| UTP-GlnB uridylyltransferase, GlnD [Catenulispora acidiphila DSM
44928]
Length = 832
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
LE+ D GLL V + G+SV A V+T G++AV+VFYVV A+G P+ +
Sbjct: 765 LEVKARDAPGLLYRVASVLARTGVSVRSARVSTLGAEAVDVFYVVTATGAPLSDD 819
>gi|149190035|ref|ZP_01868312.1| PII uridylyl-transferase [Vibrio shilonii AK1]
gi|148836065|gb|EDL53025.1| PII uridylyl-transferase [Vibrio shilonii AK1]
Length = 874
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
Query: 240 SASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEA 299
+A +KPLV + +G T V + C D+P L V L + V+ A ++
Sbjct: 672 NADDPTKPLVLMSKNATRGGTEVFVYCQDQPALFATVVAELDRRNFNVHDAQIMTSKDGF 731
Query: 300 YQEYY------------------IRHV-----DGNPISSEAER----------QRVINCL 326
+ + I+H+ DG P + R + ++ L
Sbjct: 732 VLDTFMVLDQHGDAIDVERHSAVIKHLVHVLEDGRPTRVKTRRAPRNLKHFNVKTQVDFL 791
Query: 327 EAAIKRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
K+RT +EL D GLL+ V F + G+++ A++TT G +A ++F + A
Sbjct: 792 PTKGKKRTL----MELVALDAPGLLAKVGATFAQLGVNLHAAKITTIGERAEDLFILTSA 847
Query: 387 SGNPVKSETIESVRKEIGLTI 407
+G + E +++++ TI
Sbjct: 848 TGGRLSEEEQSQLKQKLHDTI 868
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + V ++ +V L+ + + A I S DG + +D F
Sbjct: 679 PLVLMSKNATRGGTEVFVYCQDQPALFATVVAELDRRNFNVHDAQIMTSKDG-FVLDTFM 737
Query: 82 VTDQNGNKLS---------------EDDVSERIQQSLGPRARSFRSLRRSVGV--QAALE 124
V DQ+G+ + ED R++ PR +++ V +
Sbjct: 738 VLDQHGDAIDVERHSAVIKHLVHVLEDGRPTRVKTRRAPRNLKHFNVKTQVDFLPTKGKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
T +EL D PGLL++V A + L N+ A++ T R A ++I + ATG
Sbjct: 798 RTLMELVALDAPGLLAKVGATFAQLGVNLHAAKITTIGER-AEDLFILTSATG 849
>gi|111220372|ref|YP_711166.1| PII uridylyl-transferase [Frankia alni ACN14a]
gi|111147904|emb|CAJ59569.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl removing enzyme) (UTase) [Frankia alni ACN14a]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
LE+ DRAG+L + R E L V A V T G V+ FYV +A G PV +T
Sbjct: 697 LEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFYVQEADGRPVADDT---R 753
Query: 400 RKEIG---LTILRVKDDAYSKSPPQE 422
R+EI L L V+D +PP E
Sbjct: 754 RREIARAVLAALGVEDLPDQPAPPAE 779
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAER 319
TV+ +R PDR +LF V L++++ V A V + +Y++ DG P++ + R
Sbjct: 695 TVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFYVQEADGRPVADDTRR 754
Query: 320 QRVINCLEAAI 330
+ + + AA+
Sbjct: 755 REIARAVLAAL 765
>gi|413950197|gb|AFW82846.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 543
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGN-KLSEDDV 95
T++ V+ ++ G +L + + + L I RA +S+DG W VF V ++ + K+ +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 96 SERIQQSLGPRARSFRSLRRSVGV--QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNV 153
R+ S+ P + S R V L+ ++L DR GLL +V +LSDL+ +
Sbjct: 165 KNRL-MSMCPSSYSIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLELII 223
Query: 154 MGAEV-WTHNSRMASVVYIT 172
+V T + R+ + +IT
Sbjct: 224 HRVKVSTTPDGRVVDLFFIT 243
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
C D+ GL D+ R E GL +TRA+V+T G VF+VV S
Sbjct: 111 CPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRS 154
>gi|157376295|ref|YP_001474895.1| PII uridylyl-transferase [Shewanella sediminis HAW-EB3]
gi|157318669|gb|ABV37767.1| (Protein-PII) uridylyltransferase [Shewanella sediminis HAW-EB3]
Length = 859
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 235 YAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA 294
+AE+ + +PLV + T +G T + + D+PKL + L + V+ A ++A
Sbjct: 651 HAEAILKHKQDEPLVLISKHTTRGGTELFIYGKDKPKLFTTVMAVLDNKNINVHEAGIMA 710
Query: 295 ESPE-AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE----------------- 336
+ + I DG+P+S + Q + L A+ TS+
Sbjct: 711 SKDQYVLDSFVILEQDGSPVSRVSRIQALRKTLIKALNSDTSKLPKFKKLSRKMKPFRVR 770
Query: 337 -----------GIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVV 384
G S +EL D GLL+ V I L + A++TT G +A + F +
Sbjct: 771 TQVNFLPSRRHGTSMMELIALDSPGLLAKVGDILYRCQLKLLAAKITTIGERAEDFFILQ 830
Query: 385 DASGNPVKSETIESVRKEI 403
+ G + E +R+ +
Sbjct: 831 NTEGEQLNEIQQEMLRQNL 849
>gi|333024177|ref|ZP_08452241.1| putative protein P-II uridylyltransferase [Streptomyces sp. Tu6071]
gi|332744029|gb|EGJ74470.1| putative protein P-II uridylyltransferase [Streptomyces sp. Tu6071]
Length = 834
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
L + PPRV V ++ AT+I+V + + G L L Q L + + +R A+ S+ G +D
Sbjct: 746 LSVPPPRVRVAPAASHSATVIEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVD 805
Query: 79 VFHVTDQNGNKLSED---DVSERIQQSLG 104
F+VT +G L+ D ++ ++++LG
Sbjct: 806 AFYVTGPDGGPLAPDVASALASELERTLG 834
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + + G+ V A +T G+ AV+ FYV G P+ + ++
Sbjct: 766 IEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVDAFYVTGPDGGPLAPDVASAL 825
Query: 400 RKEIGLTI 407
E+ T+
Sbjct: 826 ASELERTL 833
>gi|318056559|ref|ZP_07975282.1| PII uridylyl-transferase [Streptomyces sp. SA3_actG]
Length = 834
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 19 LRMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMD 78
L + PPRV V ++ AT+I+V + + G L L Q L + + +R A+ S+ G +D
Sbjct: 746 LSVPPPRVRVAPAASHSATVIEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVD 805
Query: 79 VFHVTDQNGNKLSED---DVSERIQQSLG 104
F+VT +G L+ D ++ ++++LG
Sbjct: 806 AFYVTGPDGGPLAPDVASALAAELERTLG 834
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + + G+ V A +T G+ AV+ FYV G P+ + ++
Sbjct: 766 IEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVDAFYVTGPDGGPLAPDVASAL 825
Query: 400 RKEIGLTI 407
E+ T+
Sbjct: 826 AAELERTL 833
>gi|168031081|ref|XP_001768050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680688|gb|EDQ67122.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 28/164 (17%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFM-DVFHV 82
P V +D S+ +AT++++ ++ G+LL+ ++ L DL L + R ++++G F V
Sbjct: 7 PIVLIDQESDAEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGPNLRRKKFLV 66
Query: 83 TDQNGNKLSED-DVSERIQQSL-------GPRARSFRSL---------RRSVGVQAALEH 125
T + NK ED ++ E I+ ++ P + ++ ++ + V A H
Sbjct: 67 TRLDNNKKVEDPELLEAIRLTIINNLLQYHPESGEQLAMGVAFGENPPKKEIDVDVAT-H 125
Query: 126 TTIELTGR---------DRPGLLSEVFAVLSDLKCNVMGAEVWT 160
T+ G DRPGLL E+ V+ D+ V AE+ T
Sbjct: 126 VTVTREGSRSLLSVETADRPGLLLEILKVICDISIYVESAEIDT 169
>gi|328545863|ref|YP_004305972.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
gi|326415603|gb|ADZ72666.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
Length = 942
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
V V+N+ + T+I+V ++ G L +L + + L+L I A+IS+ GE +DVF+VTD
Sbjct: 844 VIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDL 903
Query: 86 NGNKLS----EDDVSERIQQSLGPR 106
G K++ +D + ER++ ++ R
Sbjct: 904 TGQKIANVGRQDVIRERLRDAVEGR 928
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL D+TR L++ A ++T G + V+VFYV D +G + + + V
Sbjct: 857 IEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDLTGQKIANVGRQDV 916
Query: 400 RKE 402
+E
Sbjct: 917 IRE 919
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
+T IE+TG DRPGLL ++ ++ L N+ A + T R+ V Y+T
Sbjct: 854 YTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVT 901
>gi|307251346|ref|ZP_07533262.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306856587|gb|EFM88727.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 850
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V V N R AT I + ++ L + Q+L+ + I A I+S +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 83 TDQNGNKLSEDDVSERIQQSL-------GPRARSF-------RSLRRSVGVQ----AALE 124
T+ NG L E+ E+I+QSL P+ + +S +R V+ +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T EL DR GLL+ V +V + L N++ A++ T R+ +T++
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQ 827
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQE 302
R PLV V + +G T + + C D+ +L L+ + ++ A +I +++
Sbjct: 656 RIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDS 715
Query: 303 YYIRHVDGNPISS------EAERQRVINCLEAAI-------------KRRT--------- 334
+ + ++G P+ + ++V+N E + KR+T
Sbjct: 716 FIVTELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQ 775
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
+ EL DR GLL+ V+ +F + GL++ A++TT G + + F V
Sbjct: 776 QNRTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVV 824
>gi|357022083|ref|ZP_09084314.1| PII uridylyl-transferase [Mycobacterium thermoresistibile ATCC
19527]
gi|356479831|gb|EHI12968.1| PII uridylyl-transferase [Mycobacterium thermoresistibile ATCC
19527]
Length = 830
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 41/164 (25%)
Query: 262 VNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQR 321
V L PDR LL A L V+ A+V + A + + G P ++ RQ+
Sbjct: 628 VTLVAPDRRGLLSKAAGVLALNSLRVHSASVNSHHGSAINTFVVSPHFGAPPAANLLRQQ 687
Query: 322 VINCLE------AAIKRRTSEG-----------------------------------ISL 340
+I L+ AA++RR +G + +
Sbjct: 688 LILALDGDLDVLAALERRDHDGAPGSHRPGEPAAAVPVIAAPAPPRVLWFDGSAPGELVV 747
Query: 341 ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVV 384
++ DR GLL+ +T +F +G+ + A+VTT G+ V+VF +V
Sbjct: 748 QIRAADRPGLLARLTAVFERDGVDIAWAKVTTLGAAVVDVFGIV 791
>gi|345849786|ref|ZP_08802793.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
gi|345638767|gb|EGX60267.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
Length = 815
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV+V ++R+AT+I+V + + G L + + L D + +R A+ + G +D F+V
Sbjct: 730 PPRVSVHPAASRQATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHAGTLGANAVDAFYV 789
Query: 83 TDQNGNKLSEDD---VSERIQQSL 103
T G L ++ V+ +++++L
Sbjct: 790 TGPEGAPLPGEEAVSVARKLEETL 813
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R + G+ V A T G+ AV+ FYV G P+ E SV
Sbjct: 746 IEVRAQDAPGLLFRIGRALEDAGVRVRSAHAGTLGANAVDAFYVTGPEGAPLPGEEAVSV 805
Query: 400 RKEIGLTI 407
+++ T+
Sbjct: 806 ARKLEETL 813
>gi|417853079|ref|ZP_12498511.1| PII uridylyl-transferase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|338215633|gb|EGP01889.1| PII uridylyl-transferase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
Length = 864
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEA 299
A +++ LV + + +G T + + C D+P L V T+ ++ ++ A +I
Sbjct: 667 ADKQTELLVKISNRFSEGGTEIFVYCQDQPNLFHKVVTTIGAKKFSIHDAQIITSYDGYV 726
Query: 300 YQEYYIRHVDGNPISSEAERQRVINCLEAA---------------------------IKR 332
+ + I +DG + + R ++A +K
Sbjct: 727 FDSFIITELDGKLVKFDRRRSLEKALMQALNTSKLPTFRATDNPKLQHFHVKTEVRFLKE 786
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
+ ++ +EL D+ GLL+ V+++F E L++ A++TT G +A + F + ++ +
Sbjct: 787 QRTDQTEMELFALDQTGLLAKVSQVFSELKLNLLNAKITTIGEKAEDFFILTNSEDRALT 846
Query: 393 SE 394
+E
Sbjct: 847 AE 848
>gi|342904961|ref|ZP_08726756.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21621]
gi|341952197|gb|EGT78733.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21621]
Length = 863
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 32/183 (17%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAERQRVI-NCLEAAIK----------------------------RRTSEG 337
++G + E +R+R + L A++ E
Sbjct: 735 ELNGELV--EFDRRRELEQALTVALQSEKLPVLSITPNRQIQHFTVQTDVRFLHENKKEH 792
Query: 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397
+EL D+ GLL+ V++IF E L++ A++TT G + + F + + G + S+ E
Sbjct: 793 TEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKVEDFFILANQFGQALDSQQRE 852
Query: 398 SVR 400
+R
Sbjct: 853 ILR 855
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
EHT +EL D+PGLL++V + S+L N++ A++ T ++ +I + G +D
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKVED-FFILANQFGQALD 847
>gi|224028845|gb|ACN33498.1| unknown [Zea mays]
gi|413950198|gb|AFW82847.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 516
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGN-KLSEDDV 95
T++ V+ ++ G +L + + + L I RA +S+DG W VF V ++ + K+ +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 96 SERIQQSLGPRARSFRSLRRSVGV--QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNV 153
R+ S+ P + S R V L+ ++L DR GLL +V +LSDL+ +
Sbjct: 165 KNRL-MSMCPSSYSIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLELII 223
Query: 154 MGAEV-WTHNSRMASVVYIT 172
+V T + R+ + +IT
Sbjct: 224 HRVKVSTTPDGRVVDLFFIT 243
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
C D+ GL D+ R E GL +TRA+V+T G VF+VV S
Sbjct: 111 CPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRS 154
>gi|165976013|ref|YP_001651606.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876114|gb|ABY69162.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 850
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V V N R AT I + ++ L + Q+L+ + I A I+S +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 83 TDQNGNKLSEDDVSERIQQSL-------GPRARSF-------RSLRRSVGVQ----AALE 124
T+ NG L E+ E+I+QSL P+ + +S +R V+ +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T EL DR GLL+ V +V + L N++ A++ T R+ +T++
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQ 827
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQE 302
R PLV V + +G T + + C D+ +L L+ + ++ A +I +++
Sbjct: 656 RIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDS 715
Query: 303 YYIRHVDGNPISS------EAERQRVINCLEAAI-------------KRRT--------- 334
+ + ++G P+ + ++V+N E + KR+T
Sbjct: 716 FIVTELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQ 775
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
+ EL DR GLL+ V+ +F + GL++ A++TT G + + F V
Sbjct: 776 QNRTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVV 824
>gi|307943361|ref|ZP_07658705.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
gi|307772991|gb|EFO32208.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
Length = 945
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
V V+N+ + T++++ ++ G L +L + ++ L+L I A+I++ GE +DVF+VTD
Sbjct: 846 VLVNNSISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDL 905
Query: 86 NGNKLS----EDDVSERIQQSLG 104
G K++ ++ + ER++ ++G
Sbjct: 906 TGQKIANIGRQEIIRERLEAAVG 928
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+E+ DR GLL D+TR L++ A +TT G + V+VFYV D +G +
Sbjct: 859 VEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDLTGQKI 910
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172
++T +E+TG DRPGLL ++ +S L N+ A + T ++ V Y+T
Sbjct: 855 DYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVT 903
>gi|388516485|gb|AFK46304.1| unknown [Medicago truncatula]
Length = 293
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 46/257 (17%)
Query: 85 QNGNKLSEDDVSERI---QQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSE 141
QNGN+ D V I Q L P A T +E+T DR G L +
Sbjct: 74 QNGNQGETDIVPTPIVIIDQDLDPDA------------------TVVEITFGDRLGALLD 115
Query: 142 VFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDR 201
L DL NV+ A V+ +S + IT TG ++DP+ L I+ ++ L
Sbjct: 116 TMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYH 175
Query: 202 DKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSAS--GRSKPLVTVESCTDKGY 259
+ S+ A+ ++ D++ A + S G + L VE+
Sbjct: 176 PESSSQLAMGA--------AFGLLPPKEQVDVDIATHINISDDGPDRSLFYVETA----- 222
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAER 319
DRP LL D V ++TD+ V E A ++++ + G IS +
Sbjct: 223 --------DRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSY-KGKAISKPLQ- 272
Query: 320 QRVINCLEAAIKRRTSE 336
Q + N L ++R +E
Sbjct: 273 QVLANSLRYFLRRPATE 289
>gi|345009603|ref|YP_004811957.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
gi|344035952|gb|AEM81677.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
Length = 871
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ +D GLL + R G++V A +T G+ AV+ FYV D+SG P+K V
Sbjct: 798 IEVRAQDAPGLLHRIGRALEHTGVAVRSAHASTLGANAVDAFYVTDSSGAPLKPMHAAEV 857
Query: 400 RKEI 403
+++
Sbjct: 858 AQKV 861
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRVTV S++ AT+I+V + + G L + + L + +R A+ S+ G +D F+V
Sbjct: 782 PPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEHTGVAVRSAHASTLGANAVDAFYV 841
Query: 83 TDQNGNKLSE---DDVSERIQQSL 103
TD +G L +V+++++++L
Sbjct: 842 TDSSGAPLKPMHAAEVAQKVERAL 865
>gi|421344317|ref|ZP_15794720.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
gi|395940397|gb|EJH51078.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
Length = 861
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 662 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 720
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 721 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 780
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 781 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 836
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 837 LNEEEEQHLREKL 849
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 664 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 722
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 723 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 782
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 783 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 841
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 842 EQHLREKLIEHV 853
>gi|284032664|ref|YP_003382595.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
gi|283811957|gb|ADB33796.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
Length = 752
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
L++ DR GLL D+T G + A V+T G++ V+VFY+ D G+P+ E
Sbjct: 683 LQIRAHDRPGLLYDITAAIASTGADIRSAHVSTLGAECVDVFYLTDGHGSPLDEEDARVT 742
Query: 400 RKEI 403
K I
Sbjct: 743 AKTI 746
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%)
Query: 25 RVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTD 84
RV + ++ AT++++ + ++ G L ++ + IR A++S+ G +DVF++TD
Sbjct: 669 RVDLLPDASETATVLQIRAHDRPGLLYDITAAIASTGADIRSAHVSTLGAECVDVFYLTD 728
Query: 85 QNGNKLSEDD 94
+G+ L E+D
Sbjct: 729 GHGSPLDEED 738
>gi|413950196|gb|AFW82845.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 246
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGN-KLSEDDV 95
T++ V+ ++ G +L + + + L I RA +S+DG W VF V ++ + K+ +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 96 SERIQQSLGPRARSFRSLRRSVGV--QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNV 153
R+ S+ P + S R V L+ ++L DR GLL +V +LSDL+ +
Sbjct: 165 KNRL-MSMCPSSYSIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLELII 223
Query: 154 MGAEV-WTHNSRMASVVYIT 172
+V T + R+ + +IT
Sbjct: 224 HRVKVSTTPDGRVVDLFFIT 243
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDAS 387
C D+ GL D+ R E GL +TRA+V+T G VF+VV S
Sbjct: 111 CPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRS 154
>gi|307261058|ref|ZP_07542738.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869235|gb|EFN01032.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 850
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V V N R AT I + ++ L + Q+L+ + I A I+S +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 83 TDQNGNKLSEDDVSERIQQSL-------GPRARSF-------RSLRRSVGVQ----AALE 124
T+ NG L E+ E+I+QSL P+ + +S +R V+ +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T EL DR GLL+ V +V + L N++ A++ T R+ +T++
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQ 827
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQE 302
R PLV V + +G T + + C D+ +L L+ + ++ A +I +++
Sbjct: 656 RIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDS 715
Query: 303 YYIRHVDGNPISS------EAERQRVINCLEAAI-------------KRRT--------- 334
+ + ++G P+ + ++V+N E + KR+T
Sbjct: 716 FIVTELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQ 775
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
+ EL DR GLL+ V+ +F + GL++ A++TT G + + F V
Sbjct: 776 QNRTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVV 824
>gi|15642260|ref|NP_231893.1| PII uridylyl-transferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586159|ref|ZP_01675950.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121729748|ref|ZP_01682187.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|147673286|ref|YP_001217777.1| PII uridylyl-transferase [Vibrio cholerae O395]
gi|153217366|ref|ZP_01951117.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|153823644|ref|ZP_01976311.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|153827573|ref|ZP_01980240.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227082386|ref|YP_002810937.1| PII uridylyl-transferase [Vibrio cholerae M66-2]
gi|227118708|ref|YP_002820604.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254849392|ref|ZP_05238742.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|298500363|ref|ZP_07010168.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
gi|9656824|gb|AAF95406.1| protein-P-II uridylyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549571|gb|EAX59595.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121628499|gb|EAX60985.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|124113612|gb|EAY32432.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|126518839|gb|EAZ76062.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|146315169|gb|ABQ19708.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|149737953|gb|EDM52858.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227010274|gb|ACP06486.1| protein-P-II uridylyltransferase [Vibrio cholerae M66-2]
gi|227014158|gb|ACP10368.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254845097|gb|EET23511.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|297541056|gb|EFH77110.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
Length = 881
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 740
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 741 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 800
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 801 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 856
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 857 LNEEEEQHLREKL 869
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 742
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 743 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 802
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 803 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 861
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 862 EQHLREKLIEHV 873
>gi|419955546|ref|ZP_14471672.1| PII uridylyl-transferase, partial [Pseudomonas stutzeri TS44]
gi|387967587|gb|EIK51886.1| PII uridylyl-transferase, partial [Pseudomonas stutzeri TS44]
Length = 114
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T+I++ + ++ G L + Q+ DL ++ A I++ GE DVF V
Sbjct: 15 PPQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFV 74
Query: 83 TDQNGNKLSE 92
T+ + LS+
Sbjct: 75 TNADNQPLSD 84
Score = 40.4 bits (93), Expect = 1.9, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+E+ DR GLL+ V ++F LSV A++ T G + +VF+V +A P+
Sbjct: 31 IEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTNADNQPL 82
>gi|291280233|ref|YP_003497068.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
gi|290754935|dbj|BAI81312.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
Length = 853
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 26 VTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ 85
V DN + T+I V + +K G L +++ V DL + +++A IS+D + +D F+VTD+
Sbjct: 772 VEFDNEISSNYTVIDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDK 831
Query: 86 NGNKLSEDDVSERIQQSL 103
N +K++E ++I+ SL
Sbjct: 832 NYHKITEQTFIDKIKFSL 849
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETI 396
+++ ED+ GLL + +F + G++V +A+++T + V+ FYV D + + + +T
Sbjct: 785 IDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDKNYHKITEQTF 841
>gi|297580906|ref|ZP_06942831.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
gi|297534732|gb|EFH73568.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
Length = 881
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 740
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 741 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 800
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 801 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 856
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 857 LNEEEEQHLREKL 869
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 742
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 743 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 802
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 803 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 861
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 862 EQHLREKLIEHV 873
>gi|148982220|ref|ZP_01816649.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
gi|145960611|gb|EDK25963.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
Length = 873
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESP------- 297
S+PLV + +G T V + C D+ L V L + V+ A V+A
Sbjct: 677 SQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKDGHVLDTF 736
Query: 298 -----------EAYQEYYIRHV-----DGNPISSEAER----------QRVINCLEAAIK 331
EA + +H+ DG P + R + ++ L K
Sbjct: 737 IVLDQHGKAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTLVEFLPTKSK 796
Query: 332 RRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
+RT +EL D GLL+ V F E G+++ A++TT G +A ++F + +G +
Sbjct: 797 KRTL----MELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTGGRL 852
Query: 392 KSETIESVRKEI 403
E +++R+ +
Sbjct: 853 SEEQEQALRERL 864
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + V ++ +V L+ + + A + S DG +D F
Sbjct: 679 PLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKDGH-VLDTFI 737
Query: 82 VTDQNGNKLSE---------------DDVSERIQQSLGPRARSFRSLRRSVGV--QAALE 124
V DQ+G + E D +I+ PR ++ V + +
Sbjct: 738 VLDQHGKAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTLVEFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
T +EL D PGLL++V A ++L N+ GA++ T R + +TS+ G
Sbjct: 798 RTLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTGG 850
>gi|229507664|ref|ZP_04397169.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229512141|ref|ZP_04401620.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229519276|ref|ZP_04408719.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229524265|ref|ZP_04413670.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229607168|ref|YP_002877816.1| PII uridylyl-transferase [Vibrio cholerae MJ-1236]
gi|255747043|ref|ZP_05420988.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262161413|ref|ZP_06030523.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|262168262|ref|ZP_06035959.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|360036138|ref|YP_004937901.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742066|ref|YP_005334035.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|384425225|ref|YP_005634583.1| [protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|417814289|ref|ZP_12460942.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|417818026|ref|ZP_12464655.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|418335271|ref|ZP_12944182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|418338880|ref|ZP_12947774.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|418346804|ref|ZP_12951562.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|418350566|ref|ZP_12955297.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|418355711|ref|ZP_12958430.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|419827220|ref|ZP_14350719.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|421317962|ref|ZP_15768530.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|421322018|ref|ZP_15772571.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|421325820|ref|ZP_15776344.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|421329478|ref|ZP_15779988.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|421333434|ref|ZP_15783911.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|421336976|ref|ZP_15787437.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|421340404|ref|ZP_15790836.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|421348410|ref|ZP_15798787.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|422897359|ref|ZP_16934803.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|422903557|ref|ZP_16938527.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|422907442|ref|ZP_16942240.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|422914286|ref|ZP_16948791.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|422926490|ref|ZP_16959503.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|423145812|ref|ZP_17133406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|423150488|ref|ZP_17137802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|423154307|ref|ZP_17141488.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|423157390|ref|ZP_17144483.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|423160961|ref|ZP_17147901.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|423165788|ref|ZP_17152512.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|423731810|ref|ZP_17705113.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|423769093|ref|ZP_17713231.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|423895955|ref|ZP_17727434.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|423931487|ref|ZP_17731827.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|424003240|ref|ZP_17746315.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|424007031|ref|ZP_17750001.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|424025011|ref|ZP_17764661.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|424027897|ref|ZP_17767499.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|424587177|ref|ZP_18026755.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|424595829|ref|ZP_18035148.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|424599742|ref|ZP_18038920.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|424602503|ref|ZP_18041643.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|424607436|ref|ZP_18046377.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|424611254|ref|ZP_18050093.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|424614069|ref|ZP_18052854.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|424622827|ref|ZP_18061332.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|424645790|ref|ZP_18083525.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|424653561|ref|ZP_18090941.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|424657380|ref|ZP_18094665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|440710501|ref|ZP_20891149.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443504608|ref|ZP_21071564.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443508509|ref|ZP_21075270.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443512353|ref|ZP_21078988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443515907|ref|ZP_21082417.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443519701|ref|ZP_21086094.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443524592|ref|ZP_21090802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443532186|ref|ZP_21098200.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443535994|ref|ZP_21101865.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443539527|ref|ZP_21105381.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|449055281|ref|ZP_21733949.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
gi|50402122|sp|Q9KPV0.2|GLND_VIBCH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229337846|gb|EEO02863.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229343965|gb|EEO08940.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229352106|gb|EEO17047.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229355169|gb|EEO20090.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229369823|gb|ACQ60246.1| [Protein-PII] uridylyltransferase [Vibrio cholerae MJ-1236]
gi|255735445|gb|EET90845.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262023154|gb|EEY41858.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|262028724|gb|EEY47378.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|327484778|gb|AEA79185.1| [Protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|340036775|gb|EGQ97751.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|340037749|gb|EGQ98724.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|341620497|gb|EGS46268.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|341620633|gb|EGS46400.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|341621242|gb|EGS46989.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|341636528|gb|EGS61223.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|341645880|gb|EGS70004.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|356416647|gb|EHH70272.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|356417810|gb|EHH71423.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|356422650|gb|EHH76124.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|356427999|gb|EHH81230.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|356430522|gb|EHH83731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|356431788|gb|EHH84988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|356439280|gb|EHH92267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|356444238|gb|EHH97050.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|356445062|gb|EHH97871.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|356450289|gb|EHI03019.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|356452209|gb|EHI04888.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|356647292|gb|AET27347.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795576|gb|AFC59047.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|395916220|gb|EJH27050.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|395917658|gb|EJH28486.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|395919012|gb|EJH29836.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|395928012|gb|EJH38775.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|395928836|gb|EJH39589.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|395932075|gb|EJH42819.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|395939687|gb|EJH50369.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|395942989|gb|EJH53665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|395958328|gb|EJH68824.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|395958738|gb|EJH69209.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|395970366|gb|EJH80137.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|395972525|gb|EJH82115.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|395975181|gb|EJH84678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|408006605|gb|EKG44743.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|408011829|gb|EKG49630.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|408031198|gb|EKG67835.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|408041099|gb|EKG77239.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|408042427|gb|EKG78479.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|408052501|gb|EKG87540.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|408608010|gb|EKK81413.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|408622742|gb|EKK95712.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|408633370|gb|EKL05731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|408653714|gb|EKL24869.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|408654657|gb|EKL25792.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|408844885|gb|EKL85008.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|408845774|gb|EKL85889.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|408869891|gb|EKM09178.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|408878520|gb|EKM17521.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|439973830|gb|ELP50034.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443431079|gb|ELS73633.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443434917|gb|ELS81063.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443438741|gb|ELS88459.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443442844|gb|ELS96147.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443446700|gb|ELT03359.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443449450|gb|ELT09744.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443457576|gb|ELT24973.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443460884|gb|ELT31964.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443465627|gb|ELT40287.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|448265323|gb|EMB02558.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
Length = 876
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 735
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 736 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 795
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 796 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 851
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 852 LNEEEEQHLREKL 864
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 737
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 738 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 798 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 856
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 857 EQHLREKLIEHV 868
>gi|307256623|ref|ZP_07538403.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864871|gb|EFM96774.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 850
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V V N R AT I + ++ L + Q+L+ + I A I+S +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 83 TDQNGNKLSEDDVSERIQQSL-------GPRARSF-------RSLRRSVGVQ----AALE 124
T+ NG L E+ E+I+QSL P+ + +S +R V+ +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T EL DR GLL+ V +V + L N++ A++ T R+ +T++
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQ 827
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQE 302
R PLV V + +G T + + C D+ +L L+ + ++ A +I +++
Sbjct: 656 RIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDS 715
Query: 303 YYIRHVDGNPISS------EAERQRVINCLEAAI-------------KRRT--------- 334
+ + ++G P+ + ++V+N E + KR+T
Sbjct: 716 FIVTELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQ 775
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
+ EL DR GLL+ V+ +F + GL++ A++TT G + + F V
Sbjct: 776 QNRTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVV 824
>gi|422923565|ref|ZP_16956712.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|424591969|ref|ZP_18031393.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
gi|341643854|gb|EGS68116.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|408029997|gb|EKG66678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
Length = 876
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 735
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 736 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 795
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 796 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 851
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 852 LNEEEEQHLREKL 864
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 737
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 738 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 798 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 856
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 857 EQHLREKLIEHV 868
>gi|242086641|ref|XP_002439153.1| hypothetical protein SORBIDRAFT_09g001450 [Sorghum bicolor]
gi|241944438|gb|EES17583.1| hypothetical protein SORBIDRAFT_09g001450 [Sorghum bicolor]
Length = 447
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 156/374 (41%), Gaps = 44/374 (11%)
Query: 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGN-KLSEDDV 95
T+I V+ ++ G +L + + + L I R +S+DG W VF V ++ + K+ +
Sbjct: 45 TVITVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGHWCFVVFWVVPRSSSIKIRWASL 104
Query: 96 SERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R+ S+ P + S + ++ ++L DR GLL +V +LSDL+ +
Sbjct: 105 KNRL-MSMCPSSYSI-PFYPDISQPGPSQYYLLKLLSPDRKGLLHDVTHILSDLELIIHR 162
Query: 156 AEVW-THNSRMASVVYITSEATGLPIDDPDTLAKIKRL--LLYVLKGDRDKRSANTAVSV 212
+V T + R+ + +IT D + L K +R L + +S
Sbjct: 163 VKVCTTPDGRVVDLFFIT--------DGMELLHKKERQEETCSTLIATLGPSISCEVLSA 214
Query: 213 DSTHKERRLHQMMYADRDYDMNYAESG-SASGRSKPLVTVESCT-------DKGYTVVNL 264
+ + A+ + + A+S +S S L V++ T +T+V +
Sbjct: 215 EGFQQGFSSLPPKIAEELFRVELADSEICSSSLSVELKKVQTATINFDNSLSPAHTLVQI 274
Query: 265 RCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ------EYYIRHVDG----NPIS 314
C D+ L++D + T+ D +++ ++ + + +++ VDG +P
Sbjct: 275 ICADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGSVSKGCREVDLFVKQVDGKKVMDPEK 334
Query: 315 SEAERQRV----INCLEAAIKRRTSE-----GISLELCCEDRAGLLSDVTRIFRENGLSV 365
+A R R+ ++ L I R + +EL + R + D T + G+ +
Sbjct: 335 QDALRSRLRSEMLHPLRVMIVSRGPDTELLVANPVELSGKGRPRVFYDATLALKALGICI 394
Query: 366 TRAEVTTRGSQAVN 379
AE+ G QA +
Sbjct: 395 FSAEI---GRQAAS 405
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 344 CEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
C D+AGL D+ R E GL +TR +V+T G VF+VV S +
Sbjct: 51 CPDQAGLGCDLCRTILEFGLRITRGDVSTDGHWCFVVFWVVPRSSS 96
>gi|153820325|ref|ZP_01972992.1| [Protein-PII] uridylyltransferase, partial [Vibrio cholerae NCTC
8457]
gi|126509132|gb|EAZ71726.1| [Protein-PII] uridylyltransferase [Vibrio cholerae NCTC 8457]
Length = 334
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 135 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 193
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 194 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 253
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 254 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 309
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 310 LNEEEEQHLREKL 322
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 137 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 195
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 196 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 255
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 256 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 314
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 315 EQHLREKLIEHV 326
>gi|46143705|ref|ZP_00134550.2| COG2844: UTP:GlnB (protein PII) uridylyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208080|ref|YP_001053305.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|126096872|gb|ABN73700.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 850
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDVFHV 82
P V V N R AT I + ++ L + Q+L+ + I A I+S +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 83 TDQNGNKLSEDDVSERIQQSL-------GPRARSF-------RSLRRSVGVQ----AALE 124
T+ NG L E+ E+I+QSL P+ + +S +R V+ +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T EL DR GLL+ V +V + L N++ A++ T R+ +T++
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQ 827
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 244 RSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVI-AESPEAYQE 302
R PLV V + +G T + + C D+ +L L+ + ++ A +I +++
Sbjct: 656 RIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDS 715
Query: 303 YYIRHVDGNPISS------EAERQRVINCLEAAI-------------KRRT--------- 334
+ + ++G P+ + ++V+N E + KR+T
Sbjct: 716 FIVTELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQ 775
Query: 335 SEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383
+ EL DR GLL+ V+ +F + GL++ A++TT G + + F V
Sbjct: 776 QNRTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVV 824
>gi|424618043|ref|ZP_18056714.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
gi|395961418|gb|EJH71746.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
Length = 876
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 735
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 736 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 795
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 796 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 851
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 852 LNEEEEQHLREKL 864
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 737
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 738 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 798 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 856
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 857 EQHLREKLIEHV 868
>gi|373468040|ref|ZP_09559325.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371756913|gb|EHO45715.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 863
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 248 LVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIR 306
LV + + G T V + C D+P L V T+ ++ ++ A +I + + + I
Sbjct: 675 LVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIIT 734
Query: 307 HVDGNPISSEAER---QRVINCLEAA------------------------IKRRTSEGIS 339
+G + + R Q + L++ + E
Sbjct: 735 EFNGELVEFDRRRELEQALTVSLQSEKLPALSITPNRQLQHFTVQTDVRFLHENKKEHTE 794
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+EL D+ G+L+ V++IF E L++ A++TT G +A + F + + G + S+ E +
Sbjct: 795 MELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 400 R 400
R
Sbjct: 855 R 855
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPID 181
EHT +EL D+PG+L++V + S+L N++ A++ T + A +I + G +D
Sbjct: 791 EHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEK-AEDFFILTNQFGQALD 847
>gi|357454137|ref|XP_003597349.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
gi|355486397|gb|AES67600.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
Length = 421
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 147/367 (40%), Gaps = 48/367 (13%)
Query: 38 LIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQN--GNKLSEDDV 95
+I V+ +K G ++ + + L I + +S+DG W V V Q+ ++S +
Sbjct: 24 IITVNCPDKTGLACDICRFILHFGLCILKGDVSTDGVWCYIVLWVIPQSILLPRMSYSYL 83
Query: 96 SERIQQSLGPRARSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
+R+Q P SF +++ ++ DR GLL +V VL +L+ +
Sbjct: 84 KDRLQAICPPCVASFYLVQKPTTSSPVY---LLKFCCLDRKGLLHDVTKVLCELELTIQR 140
Query: 156 AEVWT-HNSRMASVVYITSEATGLPIDDPDTLAKIKRL-----LLYVLKGDR-------- 201
+V T + ++ + ++T D+ + L KR L + GD
Sbjct: 141 VKVTTTPDGKVLDLFFVT--------DNMELLHTRKRQNETCERLNAVLGDSCIKCELQL 192
Query: 202 --DKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGY 259
+ N +S S L Q +D D + A S K +++ + +
Sbjct: 193 AGPEYEHNQGISSLSPVLANELFQCELSDNDV-RSQALSPDMKKLKKANAALDNSLSQAH 251
Query: 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEY--YIRHVDGNPISSEA 317
T++ ++C D LL+D + TL DM + + + + Y++ +I+ DG I +
Sbjct: 252 TLLQIQCADHKGLLYDIMRTLKDMNFKISYGRFLPNV-MGYRDLDIFIQQKDGKKI-LDP 309
Query: 318 ERQ---------RVINCLEAAIKRRTSE-----GISLELCCEDRAGLLSDVTRIFRENGL 363
E+Q +++ L I R + +EL R + DVT + G+
Sbjct: 310 EKQNALCSRLKLEMLHPLRVTIADRGPDTELLVANPVELSGNGRPRVFYDVTFALKTLGI 369
Query: 364 SVTRAEV 370
+ AEV
Sbjct: 370 CIFSAEV 376
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTR-GSQAVNVFYVVD 385
L+ CC DR GLL DVT++ E L++ R +VTT + +++F+V D
Sbjct: 113 LKFCCLDRKGLLHDVTKVLCELELTIQRVKVTTTPDGKVLDLFFVTD 159
>gi|229522208|ref|ZP_04411625.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|419837969|ref|ZP_14361407.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|421354961|ref|ZP_15805293.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|423735926|ref|ZP_17709118.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|424010264|ref|ZP_17753198.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
gi|229341133|gb|EEO06138.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|395954086|gb|EJH64699.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|408629352|gb|EKL02051.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|408856517|gb|EKL96212.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|408863294|gb|EKM02784.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
Length = 876
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 735
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 736 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 795
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 796 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 851
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 852 LNEEEEQHLREKL 864
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 737
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 738 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 798 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 856
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 857 EQHLREKLIEHV 868
>gi|421351981|ref|ZP_15802346.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
gi|395952426|gb|EJH63040.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
Length = 876
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 735
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 736 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 795
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 796 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 851
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 852 LNEEEEQHLREKL 864
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 737
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 738 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 798 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 856
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 857 EQHLREKLIEHV 868
>gi|422911100|ref|ZP_16945728.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|424660765|ref|ZP_18098012.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
gi|341632472|gb|EGS57338.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|408050138|gb|EKG85311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
Length = 876
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAY---- 300
SKPLV + +G T V + D+ L V L V+ A ++A S + Y
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMA-SKDGYVLDT 735
Query: 301 ---------------QEYYIRHV-----DGNPISSEAER----------QRVINCLEAAI 330
+ IRH+ DG P + +A R + ++ L
Sbjct: 736 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKS 795
Query: 331 KRRTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNP 390
K+RT +E D GLL+ V F E L + A++TT G +A ++F + +A G
Sbjct: 796 KKRTL----MEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTR 851
Query: 391 VKSETIESVRKEI 403
+ E + +R+++
Sbjct: 852 LNEEEEQHLREKL 864
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P V + + R T + + + ++ +V L+ +L + A I S DG + +D F
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDTFM 737
Query: 82 VTDQNGNKLSEDDVSERIQQSLG------PRARSFRSLRRS-----VGVQAAL------E 124
V DQNG + ED I+ + P + R + R+ V Q +
Sbjct: 738 VLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKK 797
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
T +E D PGLL+ V A ++L ++ A++ T R A ++I + A G +++ +
Sbjct: 798 RTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGER-AEDLFILTNAQGTRLNEEE 856
Query: 185 TLAKIKRLLLYV 196
++L+ +V
Sbjct: 857 EQHLREKLIEHV 868
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,485,837,118
Number of Sequences: 23463169
Number of extensions: 253319699
Number of successful extensions: 708116
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 367
Number of HSP's that attempted gapping in prelim test: 699865
Number of HSP's gapped (non-prelim): 6032
length of query: 450
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 304
effective length of database: 8,933,572,693
effective search space: 2715806098672
effective search space used: 2715806098672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)