BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044728
(450 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q65SZ8|GLND_MANSM [Protein-PII] uridylyltransferase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=glnD PE=3 SV=1
Length = 875
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 241 ASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE-SPEA 299
A ++ LV + + G T V + C DRP L V + + + ++ A +I A
Sbjct: 680 AGVETELLVKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYA 739
Query: 300 YQEYYIRHVDGNPISSEAER---QRVINCLEA--AIKRRTSEGISL-------------- 340
+ + + +DG+ + + R + +IN L + K + SE L
Sbjct: 740 FDSFIVTELDGSLLKFDRRRVLEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNT 799
Query: 341 --------ELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
EL D+AGLL+DV+ +F E LS+ A++TT G +A + F + +A G +
Sbjct: 800 EKTTHTEMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEALS 859
Query: 393 SETIESVRKEI 403
+S+ +++
Sbjct: 860 ERERQSLSEKL 870
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 30 NTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNK 89
NT T +++ + +K G L ++ V ++L+L I+ A I++ GE D F +T+ G
Sbjct: 798 NTEKTTHTEMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEA 857
Query: 90 LSEDD---VSERIQQSL 103
LSE + +SE++Q L
Sbjct: 858 LSERERQSLSEKLQARL 874
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATG 177
HT +EL D+ GLL++V V S+L ++ A++ T + A +I + A G
Sbjct: 804 HTEMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEK-AQDFFILTNAKG 855
>sp|P27249|GLND_ECOLI [Protein-PII] uridylyltransferase OS=Escherichia coli (strain K12)
GN=glnD PE=3 SV=2
Length = 890
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +GN LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B1XD36|GLND_ECODH [Protein-PII] uridylyltransferase OS=Escherichia coli (strain K12 /
DH10B) GN=glnD PE=3 SV=1
Length = 890
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +GN LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|C4ZRQ9|GLND_ECOBW [Protein-PII] uridylyltransferase OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=glnD PE=3 SV=1
Length = 890
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +GN LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B2U309|GLND_SHIB3 [Protein-PII] uridylyltransferase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=glnD PE=3 SV=1
Length = 890
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +GN LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B1IQH4|GLND_ECOLC [Protein-PII] uridylyltransferase OS=Escherichia coli (strain ATCC
8739 / DSM 1576 / Crooks) GN=glnD PE=3 SV=1
Length = 890
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DGNP+S A+R VI LE + +
Sbjct: 752 FIVLEPDGNPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +GN LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|A4XWU3|GLND_PSEMY [Protein-PII] uridylyltransferase OS=Pseudomonas mendocina (strain
ymp) GN=glnD PE=3 SV=1
Length = 899
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 245 SKPLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AY 300
S PLV ++ T + G T + + PD+ V ++ + ++ A +I + +
Sbjct: 687 SGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTL 746
Query: 301 QEYYIRHVDG-----NPISSEAERQRVINCLE------AAIKRRTSEGIS---------- 339
Y + DG NP + R+ +I L+ I+RR +
Sbjct: 747 DTYVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 340 ----------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGN 389
LEL DR GLL+ + RIF E LS+ A++ T G + +VF+V DA+
Sbjct: 807 HNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTDANNQ 866
Query: 390 PV 391
P+
Sbjct: 867 PL 868
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 12 DEFEKLVLRMNP---------PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDL 62
DE+ ++ R P P+VT+ N + R T++++ + ++ G L + ++ + DL
Sbjct: 781 DEYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 63 IIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL 103
++ A I++ GE DVF VTD N LS+ ++ R+Q+++
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCARLQETI 881
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 25/191 (13%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 80 FHVTDQNGNKLSED------------------DVSERIQQSLGPRARSFRSLRRSVGVQ- 120
+ V D +G + ++ D I Q PR + V +
Sbjct: 749 YVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 121 -AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLP 179
A T +ELT DRPGLL+ + + + ++ A++ T R+ V ++T +A P
Sbjct: 809 DAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVT-DANNQP 867
Query: 180 IDDPDTLAKIK 190
+ DP+ A+++
Sbjct: 868 LSDPELCARLQ 878
>sp|P56884|GLND_RHIME [Protein-PII] uridylyltransferase OS=Rhizobium meliloti (strain
1021) GN=glnD PE=3 SV=1
Length = 949
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ NT + K T+I+V+ ++ G L E+ VL+DL L I A+I++ GE +D F+VT
Sbjct: 831 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARS 109
D G+K++ SE Q ++ R ++
Sbjct: 891 DLVGSKIT----SENRQMNIAARLKA 912
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DR GLLSEV AVLSDL ++ A + T ++ Y+T + G I +
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT-DLVGSKITSENR 902
Query: 186 LAKIKRLLLYVLKGDRDK 203
I L VL G+ D+
Sbjct: 903 QMNIAARLKAVLAGEVDE 920
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
DR GLLS+VT + + L + A +TT G + ++ FYV D G+ + SE
Sbjct: 852 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKITSE 900
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 23/212 (10%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T I + D P LL+ + + N++GA++ T + A + + + D+
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
A I +L+ VL G KR S K R +
Sbjct: 793 AASIGKLIEDVLSGR--KRLPEVIASRTRVKKRSRAFTV--------------------- 829
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P VT+ + +TV+ + DR LL + L+D+ + A + + +Y+
Sbjct: 830 TPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEG 337
+ G+ I+SE + + L+A + E
Sbjct: 890 TDLVGSKITSENRQMNIAARLKAVLAGEVDEA 921
>sp|A4VJR9|GLND_PSEU5 [Protein-PII] uridylyltransferase OS=Pseudomonas stutzeri (strain
A1501) GN=glnD PE=3 SV=1
Length = 900
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP+VT+ N + R T++++ + ++ G L + Q+ D DL ++ A I++ GE DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD + LS+ + R+QQ++
Sbjct: 861 TDADNQPLSDPQLCLRLQQAI 881
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A ++ S +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + DG+PI + ER + + + L AA I+RR +
Sbjct: 749 YIVLEADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LE+ DR GLL+ V ++F + LSV A++ T G + +VF+V DA P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 29/212 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPI-DDPD 184
T I + D+ + A + L N+ A + T +S+ YI EA G PI ++P+
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLEADGSPIGNNPE 764
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
+ +I+ L+ L R+ + +++ R+L +
Sbjct: 765 RIEEIRSGLIAAL------RNPDDYLTIIQRRVPRQLKHFAFP----------------- 801
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P VT+ + T + T++ + PDRP LL D V +A + ++
Sbjct: 802 --PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 305 IRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ D P+S + Q + +A IK E
Sbjct: 860 VTDADNQPLS---DPQLCLRLQQAIIKELQQE 888
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I +S ++ +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V + +G+ + + ERI++ + R+ ++R V Q L+H
Sbjct: 749 YIVLEADGSPIGNN--PERIEEIRSGLIAALRNPDDYLTIIQRRVPRQ--LKHFAFPPQV 804
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +E+ DRPGLL+ V + D +V A++ T R+ V ++T +A
Sbjct: 805 TIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT-DA 863
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSV 212
P+ DP ++++ ++ L+ + +++ + +++ +
Sbjct: 864 DNQPLSDPQLCLRLQQAIIKELQQENEQQPSPSSIVI 900
>sp|Q8UIF1|GLND_AGRT5 [Protein-PII] uridylyltransferase OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=glnD PE=3 SV=1
Length = 942
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP VT+ N + K T+I+V+ ++ G L ++ V+ DL L I A I++ GE +D F+V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
TD G K++ D+ I Q L
Sbjct: 886 TDLFGQKVTNDNRQASIAQRL 906
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ C DR GLL+D+T + + L + A +TT G + ++ FYV D G V ++
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTND 896
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 44/289 (15%)
Query: 53 LVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQ--NGNKLSEDDVSERIQQSLGPRARSF 110
L L D RR Y E ++ + DQ + + E D E+ ++ R SF
Sbjct: 667 LYDALEDWGQKARRKYTKLHYEPYLLTVALEDQVRHTRFMREADKQEKALSTM-VRTHSF 725
Query: 111 RSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVV 169
++ T I + D P LLS + + N+ A+++T + R +
Sbjct: 726 HAI------------TEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRALDTI 773
Query: 170 YITSEATGLPIDDPDTL--AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYA 227
I E PID+ +T A + +L+ VL G ++RL +M+ A
Sbjct: 774 LINRE---FPIDEDETRRGANVGKLIEEVLSG------------------KQRLPEMI-A 811
Query: 228 DRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVV 287
R + ++ P VT+ + +TV+ + C DRP LL D + D+ +
Sbjct: 812 TR----TKSRRKKSAFTIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDI 867
Query: 288 YHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+ A + + +Y+ + G ++++ + + L+A + + E
Sbjct: 868 HSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>sp|Q9RAE4|GLND_RHILV [Protein-PII] uridylyltransferase OS=Rhizobium leguminosarum bv.
viciae GN=glnD PE=3 SV=2
Length = 944
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PP V + N+ + K T+I+V+ ++ G L E+ VL+DL L I+ A I++ GE +D F+V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 83 TDQNGNKLSED 93
TD G K+S D
Sbjct: 884 TDLVGQKISGD 894
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ C DR GLLS++T + + L + A +TT G + ++ FYV D G + ++
Sbjct: 840 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDS 895
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 68 YISSDGEWFMDVFHVTDQNGN------------KLSEDDVS--ERIQQSLGPRARSFRSL 113
+ +SDG +D HV+ + + ++ ED +S +R+ + + RAR+ +
Sbjct: 760 FTTSDGR-ALDTIHVSREFTDDADELRRAATIGRMIEDVLSGRKRLPEVIATRARNRKKS 818
Query: 114 RR-----SVGVQAAL--EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMA 166
+ SV + +L + T IE+ DRPGLLSE+ AVLSDL ++ A + T ++
Sbjct: 819 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 878
Query: 167 SVVYIT 172
Y+T
Sbjct: 879 DTFYVT 884
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT-HNSRMASVVYITSEATGLPIDDPD 184
T I + D P LL+ + + N++ A+++T + R ++++ E T DD D
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFT----DDAD 782
Query: 185 TL---AKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSA 241
L A I R++ VL G ++ ++ + ++++ S
Sbjct: 783 ELRRAATIGRMIEDVLSG---RKRLPEVIATRARNRKK--------------------SK 819
Query: 242 SGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQ 301
+ P V + + +TV+ + C DRP LL + L+D+ + A + +
Sbjct: 820 AFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVID 879
Query: 302 EYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSE 336
+Y+ + G IS +++R + ++A + E
Sbjct: 880 TFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 914
>sp|B7NIC8|GLND_ECO7I [Protein-PII] uridylyltransferase OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIQFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDDVSERIQQSL----------GPRARSFRSLRRSVGVQAALE---- 124
F V + +G+ LS D E IQ L P+ R + R V+ +
Sbjct: 751 TFIVLEPDGSPLSADR-HEVIQFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 125 HTT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
HT +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|Q98C27|GLND_RHILO [Protein-PII] uridylyltransferase OS=Rhizobium loti (strain
MAFF303099) GN=glnD PE=3 SV=1
Length = 933
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
+ IE+ G DRPGLLSE+ LSDL ++ A + T ++ Y+T + TG ID P
Sbjct: 847 SVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT-DLTGQKIDSPAR 905
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVD 213
+A I+ L+ L+G +R + +
Sbjct: 906 IATIRNRLMATLEGIAPERGGKAKAAAE 933
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPR + NT + + ++I+V+ ++ G L E+ L+DL L I A+I++ GE +D F+V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 83 TDQNGNKL 90
TD G K+
Sbjct: 893 TDLTGQKI 900
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET-IESVRKEIG 404
DR GLLS++T + L + A +TT G + ++ FYV D +G + S I ++R +
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRLM 914
Query: 405 LTI 407
T+
Sbjct: 915 ATL 917
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 239 GSASGRSKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE 298
G+ + P + + ++V+ + DRP LL + TL+D+ + A + +
Sbjct: 826 GAKVFKIPPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEK 885
Query: 299 AYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLE 341
+Y+ + G I S A + N L A T EGI+ E
Sbjct: 886 VIDTFYVTDLTGQKIDSPARIATIRNRLMA-----TLEGIAPE 923
>sp|Q48F57|GLND_PSE14 [Protein-PII] uridylyltransferase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=glnD PE=3 SV=1
Length = 898
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 247 PLVTVESCTDK---GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE-AYQE 302
PLV ++ T + G T + + PD+ V + + ++ A +I S +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 303 YYIRHVDGNPISSEAER-QRVINCLEAA----------IKRRTSEGIS------------ 339
Y + +G I ER Q + N L A IKRR +
Sbjct: 748 YIVLDNEGGSIGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 807
Query: 340 --------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPV 391
LEL DR GLL+ + +IF E LS+ A++ T G + +VF++ DA+ +P+
Sbjct: 808 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 867
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P+VT+ N + R T++++ + ++ G L + ++ + DL ++ A I++ GE DVF +T
Sbjct: 801 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D N + LS+ + ++Q ++
Sbjct: 861 DANNHPLSDPQLCSQLQDAI 880
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 24 PRVTVDNTSNRK---ATLIKVDSANKRGSLLELVQVLNDLDLIIRRA-YISSDGEWFMDV 79
P V + T+ R+ T I + + ++ V ++ L+L I A I+S ++ +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 80 FHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-------LRRSVGVQAALEH------- 125
+ V D G + D ER+Q+ + R+ ++R V Q L+H
Sbjct: 748 YIVLDNEGGSIG--DNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQ--LKHFAFAPQV 803
Query: 126 ----------TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
T +EL DRPGLL+ + + + ++ A++ T R+ V +IT +A
Sbjct: 804 TIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT-DA 862
Query: 176 TGLPIDDPDTLAKIK 190
P+ DP ++++
Sbjct: 863 NNHPLSDPQLCSQLQ 877
>sp|Q1RG23|GLND_ECOUT [Protein-PII] uridylyltransferase OS=Escherichia coli (strain UTI89
/ UPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|A1A7L1|GLND_ECOK1 [Protein-PII] uridylyltransferase OS=Escherichia coli O1:K1 / APEC
GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B7MBE8|GLND_ECO45 [Protein-PII] uridylyltransferase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|Q0TLG6|GLND_ECOL5 [Protein-PII] uridylyltransferase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|A7ZHQ7|GLND_ECO24 [Protein-PII] uridylyltransferase OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|Q3Z5J1|GLND_SHISS [Protein-PII] uridylyltransferase OS=Shigella sonnei (strain Ss046)
GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|Q325X3|GLND_SHIBS [Protein-PII] uridylyltransferase OS=Shigella boydii serotype 4
(strain Sb227) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B6HZE1|GLND_ECOSE [Protein-PII] uridylyltransferase OS=Escherichia coli (strain SE11)
GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|A7ZWB3|GLND_ECOHS [Protein-PII] uridylyltransferase OS=Escherichia coli O9:H4 (strain
HS) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B7M1A6|GLND_ECO8A [Protein-PII] uridylyltransferase OS=Escherichia coli O8 (strain
IAI1) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B7LGM7|GLND_ECO55 [Protein-PII] uridylyltransferase OS=Escherichia coli (strain 55989
/ EAEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|Q83MD4|GLND_SHIFL [Protein-PII] uridylyltransferase OS=Shigella flexneri GN=glnD PE=3
SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B5Z0E5|GLND_ECO5E [Protein-PII] uridylyltransferase OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|Q8X8Y6|GLND_ECO57 [Protein-PII] uridylyltransferase OS=Escherichia coli O157:H7
GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|Q0T842|GLND_SHIF8 [Protein-PII] uridylyltransferase OS=Shigella flexneri serotype 5b
(strain 8401) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|B1LGW8|GLND_ECOSM [Protein-PII] uridylyltransferase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|Q1QRM1|GLND_NITHX [Protein-PII] uridylyltransferase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=glnD PE=3 SV=1
Length = 931
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPD 184
HT IE++G DRPGLL ++ A +S L N+ A V T R V Y+T + G I P
Sbjct: 849 HTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVT-DLLGARITAPT 907
Query: 185 TLAKIKRLLLYVL 197
A IKR L+++L
Sbjct: 908 RQAAIKRALIHLL 920
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 20 RMNP----PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEW 75
R+ P P+V V+N + + T+I+V ++ G L +L ++ L+L I A++++ GE
Sbjct: 829 RLRPFVVEPKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGER 888
Query: 76 FMDVFHVTDQNGNKLSEDDVSERIQQSL 103
DVF+VTD G +++ I+++L
Sbjct: 889 ARDVFYVTDLLGARITAPTRQAAIKRAL 916
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESV 399
+E+ DR GLL +T + L++ A V T G +A +VFYV D G + + T ++
Sbjct: 852 IEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQAA 911
Query: 400 RKEIGLTIL 408
K + +L
Sbjct: 912 IKRALIHLL 920
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 94 DVSERIQQSLGPRA--RSFRSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKC 151
D++ +I+ + RA + R L +VG A T + + D P LLS + +
Sbjct: 705 DLAHKIRHARFLRASEQGGRKLNINVGFDEARGVTELTIFAADHPWLLSIIAGACASAGA 764
Query: 152 NVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVS 211
N++ A+++T T++ L DT+A I R + DRD+ A
Sbjct: 765 NIVDAQIYT-----------TTDGQAL-----DTIA-ISR------EYDRDEDEGRRAAR 801
Query: 212 VDSTHKERRLHQMMYADRDYDMNYAESGSASGRSK-------PLVTVESCTDKGYTVVNL 264
+ + Q++ D + + A+G+++ P V V + +TV+ +
Sbjct: 802 IGEI-----IEQVI--DGRLRLPDVVARRAAGKTRLRPFVVEPKVIVNNQWSDRHTVIEV 854
Query: 265 RCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVIN 324
DRP LLF ++ + + A V A +Y+ + G I++
Sbjct: 855 SGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTR------ 908
Query: 325 CLEAAIKR 332
+AAIKR
Sbjct: 909 --QAAIKR 914
>sp|B7N834|GLND_ECOLU [Protein-PII] uridylyltransferase OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|C0RGK0|GLND_BRUMB [Protein-PII] uridylyltransferase OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=glnD PE=3 SV=1
Length = 934
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>sp|A7MGS0|GLND_CROS8 [Protein-PII] uridylyltransferase OS=Cronobacter sakazakii (strain
ATCC BAA-894) GN=glnD PE=3 SV=1
Length = 892
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPL+ + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 695 SKPLILLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS----------------------- 339
+ + DG+P+S + + + + LE AI +RT +
Sbjct: 754 FIVLEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTH 812
Query: 340 ------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V ++F + G+S+ A ++T G + ++F + A + +
Sbjct: 813 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNN 872
Query: 394 ETIESVRKEI 403
+ VR+ +
Sbjct: 873 LLQQEVRQRL 882
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI-SSDGEWFMDV 79
++ P + + + R T I + S ++ + L+ +L + A I ++ + MD
Sbjct: 694 LSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDT 753
Query: 80 FHVTDQNGNKLSED-----------DVSERIQQSLGPRAR--SFRSLRRSVGVQAALEHT 126
F V + +G+ LS D +++R Q PR + R V HT
Sbjct: 754 FIVLEPDGSPLSPDRHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHT 813
Query: 127 T----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI-TSEATGL 178
+EL D+PGLL+ V V +DL ++ GA + T R+ + I T++ GL
Sbjct: 814 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGL 870
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 303 YYIRHVDGNPISSEAE---RQRVINCLEAAIKRRTSEGISLELCCEDRAGLLSDVTRIFR 359
Y++RH N ++ A R + L + T G + + DR L + V
Sbjct: 673 YFVRH-SPNQLAWHARHLLRHDLSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELD 731
Query: 360 ENGLSVTRAEV-TTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDAYSKS 418
LSV A++ TTR A++ F V++ G+P+ + E++R + I + +
Sbjct: 732 RRNLSVHDAQIFTTRDDMAMDTFIVLEPDGSPLSPDRHEAIRHGLEQAITQ-----RTWQ 786
Query: 419 PPQ 421
PPQ
Sbjct: 787 PPQ 789
>sp|Q8G312|GLND_BRUSU [Protein-PII] uridylyltransferase OS=Brucella suis biovar 1 (strain
1330) GN=glnD PE=3 SV=1
Length = 934
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>sp|B0CIQ3|GLND_BRUSI [Protein-PII] uridylyltransferase OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=glnD PE=3 SV=1
Length = 934
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>sp|Q8YES3|GLND_BRUME [Protein-PII] uridylyltransferase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=glnD PE=3 SV=1
Length = 934
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>sp|Q57FN0|GLND_BRUAB [Protein-PII] uridylyltransferase OS=Brucella abortus biovar 1
(strain 9-941) GN=glnD PE=3 SV=1
Length = 934
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>sp|Q2YNZ1|GLND_BRUA2 [Protein-PII] uridylyltransferase OS=Brucella abortus (strain 2308)
GN=glnD PE=3 SV=1
Length = 934
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>sp|B2S8D8|GLND_BRUA1 [Protein-PII] uridylyltransferase OS=Brucella abortus (strain S19)
GN=glnD PE=3 SV=1
Length = 934
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>sp|A5VN81|GLND_BRUO2 [Protein-PII] uridylyltransferase OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=glnD PE=3 SV=1
Length = 934
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G+K+S I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
IKR LL +L + R+
Sbjct: 906 QGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405
DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T + K L
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLL 914
Query: 406 TILRVKDDAYSKS-PPQESG 424
+L ++ A + PQ +
Sbjct: 915 ALLGAENGARTNGRSPQAAA 934
>sp|A6U5G1|GLND_SINMW [Protein-PII] uridylyltransferase OS=Sinorhizobium medicae (strain
WSM419) GN=glnD PE=3 SV=1
Length = 949
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P VT+ N + K T+I+V+ ++ G L E+ VL+DL L I A+I++ GE +D F+VT
Sbjct: 831 PEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 84 DQNGNKLSEDDVSERIQQSLGPRARS 109
D G+K++ SE Q ++ R ++
Sbjct: 891 DLVGSKIT----SENRQMNIAARLKA 912
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 65 RRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRSVGVQAAL- 123
RRA +S G+ DV +G K D ++ R + R+R+F ++ V + AL
Sbjct: 791 RRA--ASIGKLIEDVL-----SGRKKLPDVIASRTRSK--KRSRAF-TVTPEVTISNALS 840
Query: 124 -EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDD 182
+ T IE+ G DR GLLSEV AVLSDL ++ A + T ++ Y+T + G I
Sbjct: 841 NKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT-DLVGSKITS 899
Query: 183 PDTLAKIKRLLLYVLKGDRDK 203
+ I L VL G+ D+
Sbjct: 900 ENRQMNIAARLKAVLAGEVDE 920
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
DR GLLS+VT + + L + A +TT G + ++ FYV D G+ + SE
Sbjct: 852 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKITSE 900
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 23/212 (10%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T I + D P LL+ + + N++GA++ T + A + + + D+
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 186 LAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRS 245
A I +L+ VL G R V T ++R S +
Sbjct: 793 AASIGKLIEDVLSG----RKKLPDVIASRTRSKKR-------------------SRAFTV 829
Query: 246 KPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYI 305
P VT+ + +TV+ + DR LL + L+D+ + A + + +Y+
Sbjct: 830 TPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
Query: 306 RHVDGNPISSEAERQRVINCLEAAIKRRTSEG 337
+ G+ I+SE + + L+A + E
Sbjct: 890 TDLVGSKITSENRQMNIAARLKAVLAGEVDEA 921
>sp|B7UIL2|GLND_ECO27 [Protein-PII] uridylyltransferase OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
SKPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAI---------KRRTSEGIS------------- 339
+ + DG+P+S A+R VI LE + RR +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV-TTRGSQAVNVFYVVDASGNPVK 392
T G + + DR L + V LSV A++ TTR A++ F V++ G+P+
Sbjct: 704 TRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLS 763
Query: 393 SETIESVRKEIGLTILRVKDDAYSKSPPQ 421
++ E +R GL + ++ S PPQ
Sbjct: 764 ADRHEVIR--FGLEQVLIQS---SWQPPQ 787
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRRSVGVQAALE----H 125
F V + +G+ LS D + ++Q L P+ R + R V+ + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|A8ALC3|GLND_CITK8 [Protein-PII] uridylyltransferase OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=glnD PE=3 SV=1
Length = 890
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
++PL+ V +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 TRPLILVSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R I LE AI +
Sbjct: 752 FIVLEPDGSPLS--ADRHEAIRFGLEQAITQSSWQPPQPRRQPAKLRHFTVDTEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMDVFH 81
P + V + R T I + S ++ + L+ +L + A I + DG MD F
Sbjct: 695 PLILVSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMDTFI 753
Query: 82 VTDQNGNKLS-----------EDDVSERIQQSLGPRARSFRSLRRSVGVQAAL--EHTT- 127
V + +G+ LS E +++ Q PR + + +V + HT
Sbjct: 754 VLEPDGSPLSADRHEAIRFGLEQAITQSSWQPPQPRRQPAKLRHFTVDTEVTFLPTHTDR 813
Query: 128 ---IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
+EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 814 KSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIAT 862
>sp|A1JP85|GLND_YERE8 [Protein-PII] uridylyltransferase OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=glnD PE=3
SV=1
Length = 892
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 37/191 (19%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
+KPLV V +G T + + CPDRP L F AV D + + H I + + A
Sbjct: 695 TKPLVLVSRQATRGGTEIFIWCPDRPSL-FAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 303 YYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEG------------------------- 337
+ + DG+P++ + +I+ L+ A+ R+ +
Sbjct: 754 FIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTH 812
Query: 338 ----ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKS 393
LEL D+ GLL+ V IF + GLS+ A +TT G + ++F + D +
Sbjct: 813 NERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSI 872
Query: 394 ETIESVRKEIG 404
ET R+E+
Sbjct: 873 ET----RRELA 879
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 18/169 (10%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWF-MDVFHV 82
P V V + R T I + ++ +V L+ +L + A I ++ + MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 83 TDQNGNKLSEDD---VSERIQQSL------GPRARSFRSLRRSVGVQAALEH-------- 125
+ +G+ L++D + +QQ++ PR R R V
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSE 174
T +EL D+PGLL+ V + +DL ++ A + T R+ + + +
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADK 865
>sp|A6WV84|GLND_OCHA4 [Protein-PII] uridylyltransferase OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=glnD PE=3 SV=1
Length = 934
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
PRV ++NT + K T+I+V+ ++ G L EL +++DL L I A+I++ GE +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 84 DQNGNKLS 91
D G+K+S
Sbjct: 894 DLVGHKIS 901
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDT 185
T IE+ G DRPGLLSE+ ++SDL ++ A + T ++ Y+T + G I +
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT-DLVGHKISNATR 905
Query: 186 LAKIKRLLLYVLKGDRDKRS 205
I+R LL VL G+ ++
Sbjct: 906 QGNIRRKLLGVLSGENGSKT 925
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSET 395
+E+ DR GLLS++T + + L + A +TT G + ++ FYV D G+ + + T
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 904
>sp|Q8RQD1|GLND_AZOBR [Protein-PII] uridylyltransferase OS=Azospirillum brasilense
GN=glnD PE=3 SV=1
Length = 933
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 23 PPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHV 82
PPRV +DN ++ T+I+V+ ++ G L +L + L +L L I A IS+ GE +DVF+V
Sbjct: 844 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903
Query: 83 TDQNGNKLSEDDVSERIQQSL 103
D G K++ ++ +I++ L
Sbjct: 904 KDVFGLKVTHENKLAQIRERL 924
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 61 DLIIRRAYISSDGEWFMDVFHVTD-------QNGNKLSEDDVSERIQQSLGPRARSFRSL 113
D++ R + ++G +DVF V D ++G+KL++ +S I++ L + + L
Sbjct: 771 DIVDARIFTMTNG-MALDVFTVQDAAGGGAFESGDKLAK--LSVMIEKVLSGQLKPLHDL 827
Query: 114 ------------------RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMG 155
R + A+ HT IE+ GRDRPGLL ++ L++L +
Sbjct: 828 TKRKAPHASRTRVFHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISS 887
Query: 156 AEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197
A++ T+ + V Y+ + GL + + LA+I+ LL+ L
Sbjct: 888 AKISTYGEKAIDVFYV-KDVFGLKVTHENKLAQIRERLLHAL 928
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 27/206 (13%)
Query: 126 TTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGL-PIDDPD 184
T + + D GL S + L+ +++ A ++T + MA V+ +A G + D
Sbjct: 745 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 804
Query: 185 TLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGR 244
LAK+ ++ VL G T + R H
Sbjct: 805 KLAKLSVMIEKVLSGQLKPLHDLTKRKAPHASRTRVFH---------------------- 842
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYY 304
P V +++ +TV+ + DRP LL+D LT++ + A + +A +Y
Sbjct: 843 VPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFY 902
Query: 305 IRHVDGNPISSEAE----RQRVINCL 326
++ V G ++ E + R+R+++ L
Sbjct: 903 VKDVFGLKVTHENKLAQIRERLLHAL 928
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSE 394
+E+ DR GLL D+TR L ++ A+++T G +A++VFYV D G V E
Sbjct: 860 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFGLKVTHE 914
>sp|A5ETJ9|GLND_BRASB [Protein-PII] uridylyltransferase OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=glnD PE=3 SV=1
Length = 931
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 116 SVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEA 175
S+ Q + +T IE++G DRPGLL E+ +S L N+ A V T R V Y+T +
Sbjct: 840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DL 898
Query: 176 TGLPIDDPDTLAKIKRLLLYVLKGD 200
G I+ P A IK LL++L D
Sbjct: 899 LGAQINAPTRQAAIKSALLHLLASD 923
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 24 PRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVT 83
P V+++N + T+I+V ++ G L EL ++ L+L I A++++ GE DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 84 DQNGNKLSEDDVSERIQQSL 103
D G +++ I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 327 EAAIKRRTSEGIS-LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385
E +I + SE + +E+ DR GLL ++T + L++ A V T G +A +VFYV D
Sbjct: 838 EVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 386 ASGNPVKSETIESVRKEIGLTILRVKDDA 414
G + + T ++ K L +L D A
Sbjct: 898 LLGAQINAPTRQAAIKSALLHLLASDDTA 926
>sp|B5F8S8|GLND_SALA4 [Protein-PII] uridylyltransferase OS=Salmonella agona (strain
SL483) GN=glnD PE=3 SV=1
Length = 890
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 35/174 (20%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
S+PLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 SQPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKRRTSEGIS---------------------- 339
+ + DGNP++ A+R VI LE I +R+ +
Sbjct: 752 FIVLEPDGNPLA--ADRHDVIRTGLEQTITQRSWQPPQPRRQPAKLRHFTVETEVNFLPT 809
Query: 340 -------LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386
+EL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A
Sbjct: 810 HTDRKSFMELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIATA 863
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
++ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LSQPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLS-----------EDDVSERIQQSLGPRAR--SFRSLRRSVGVQAALEH 125
F V + +GN L+ E +++R Q PR + R V H
Sbjct: 751 TFIVLEPDGNPLAADRHDVIRTGLEQTITQRSWQPPQPRRQPAKLRHFTVETEVNFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFMELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIAT 862
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 334 TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEV-TTRGSQAVNVFYVVDASGNPVK 392
T G + + DR L + V LSV A++ TTR A++ F V++ GNP+
Sbjct: 704 TRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGNPLA 763
Query: 393 SETIESVRKEIGLTILRVKDDAYSKSPPQ 421
++ + +R + TI + S PPQ
Sbjct: 764 ADRHDVIRTGLEQTITQ-----RSWQPPQ 787
>sp|Q8CY19|GLND_ECOL6 [Protein-PII] uridylyltransferase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 245 SKPLVTVESCTDKGYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPE--AYQE 302
KPLV + +G T + + PDRP LF AVC D + + H I + + A
Sbjct: 693 GKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 303 YYIRHVDGNPISSEAERQRVINC-LEAAIKR----------------------------- 332
+ + DG+P+S A+R VI LE + +
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 333 RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVK 392
T LEL D+ GLL+ V +IF + G+S+ A +TT G + ++F + A +
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 393 SETIESVRKEI 403
+E + V + +
Sbjct: 870 NELQQEVHQRL 880
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 21 MNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYI--SSDGEWFMD 78
+ P V + + R T I + S ++ + L+ +L + A I + DG MD
Sbjct: 692 LGKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGM-AMD 750
Query: 79 VFHVTDQNGNKLSEDD-----------VSERIQQSLGPRARSFRSLRRSVGVQAAL--EH 125
F V + +G+ LS D +++ Q PR + + +V + H
Sbjct: 751 TFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTH 810
Query: 126 TT----IELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173
T +EL D+PGLL+ V + +DL ++ GA + T R+ + I +
Sbjct: 811 TDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIAT 862
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,164,836
Number of Sequences: 539616
Number of extensions: 6065404
Number of successful extensions: 18456
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 17754
Number of HSP's gapped (non-prelim): 674
length of query: 450
length of database: 191,569,459
effective HSP length: 121
effective length of query: 329
effective length of database: 126,275,923
effective search space: 41544778667
effective search space used: 41544778667
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)