Query 044728
Match_columns 450
No_of_seqs 334 out of 2076
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:30:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044728.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044728hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 1.2E-18 4E-23 161.7 14.1 143 258-405 4-161 (195)
2 2nyi_A Unknown protein; protei 99.7 7.2E-17 2.5E-21 149.6 16.8 155 35-198 4-164 (195)
3 1u8s_A Glycine cleavage system 99.7 1E-16 3.5E-21 148.1 17.6 139 259-405 6-164 (192)
4 1u8s_A Glycine cleavage system 99.6 6E-15 2E-19 136.2 14.9 153 36-198 6-167 (192)
5 3p96_A Phosphoserine phosphata 98.8 1.5E-07 5.1E-12 96.3 18.4 123 258-385 11-150 (415)
6 3p96_A Phosphoserine phosphata 98.7 2E-07 6.8E-12 95.4 16.1 151 35-198 11-167 (415)
7 2f06_A Conserved hypothetical 98.6 1.1E-06 3.8E-11 76.6 15.5 112 260-383 7-118 (144)
8 2f06_A Conserved hypothetical 98.6 9.8E-07 3.3E-11 76.9 14.3 112 37-171 7-118 (144)
9 3l76_A Aspartokinase; alloster 98.1 0.0025 8.6E-08 68.2 30.2 267 37-369 271-562 (600)
10 1zpv_A ACT domain protein; str 98.1 1.8E-05 6.2E-10 63.0 9.7 67 124-197 4-70 (91)
11 1zpv_A ACT domain protein; str 98.0 3.6E-05 1.2E-09 61.2 10.6 64 259-328 5-68 (91)
12 2ko1_A CTR148A, GTP pyrophosph 98.0 2.8E-05 9.6E-10 61.2 8.9 64 337-405 5-68 (88)
13 2ko1_A CTR148A, GTP pyrophosph 97.8 0.0001 3.4E-09 57.9 9.1 63 125-194 5-67 (88)
14 2re1_A Aspartokinase, alpha an 97.6 0.00052 1.8E-08 61.2 11.9 102 258-368 24-137 (167)
15 2re1_A Aspartokinase, alpha an 97.5 0.00071 2.4E-08 60.3 11.9 110 34-156 23-137 (167)
16 3obi_A Formyltetrahydrofolate 97.5 0.0039 1.3E-07 60.5 17.0 117 36-160 6-124 (288)
17 3nrb_A Formyltetrahydrofolate 97.4 0.0028 9.5E-08 61.5 14.9 116 35-160 6-123 (287)
18 3n0v_A Formyltetrahydrofolate 97.4 0.0048 1.6E-07 59.8 16.2 46 36-81 8-55 (286)
19 2dtj_A Aspartokinase; protein- 97.4 0.0016 5.4E-08 58.7 11.7 114 257-383 13-140 (178)
20 3o1l_A Formyltetrahydrofolate 97.4 0.003 1E-07 61.7 14.4 47 36-82 22-70 (302)
21 3obi_A Formyltetrahydrofolate 97.3 0.0077 2.6E-07 58.4 16.2 106 259-369 6-121 (288)
22 2dtj_A Aspartokinase; protein- 97.2 0.0031 1.1E-07 56.7 12.4 109 34-156 13-129 (178)
23 3n0v_A Formyltetrahydrofolate 97.2 0.0077 2.6E-07 58.3 15.3 102 259-366 8-119 (286)
24 3o1l_A Formyltetrahydrofolate 97.2 0.0069 2.4E-07 59.1 14.9 102 260-366 23-134 (302)
25 3lou_A Formyltetrahydrofolate 97.2 0.0079 2.7E-07 58.5 15.1 42 36-77 10-53 (292)
26 2dt9_A Aspartokinase; protein- 97.1 0.0031 1E-07 56.1 10.9 109 34-156 14-129 (167)
27 2dt9_A Aspartokinase; protein- 97.1 0.002 6.9E-08 57.3 9.6 120 257-386 14-143 (167)
28 3lou_A Formyltetrahydrofolate 97.1 0.01 3.5E-07 57.6 15.1 107 259-369 10-127 (292)
29 3nrb_A Formyltetrahydrofolate 97.0 0.018 6E-07 55.9 15.6 103 259-368 7-119 (287)
30 2f1f_A Acetolactate synthase i 96.9 0.0027 9.1E-08 56.5 8.6 65 125-197 3-69 (164)
31 3l76_A Aspartokinase; alloster 96.8 0.16 5.6E-06 54.1 22.5 191 34-291 353-562 (600)
32 3s1t_A Aspartokinase; ACT doma 96.7 0.012 4E-07 53.1 11.4 111 34-157 14-131 (181)
33 2f1f_A Acetolactate synthase i 96.7 0.004 1.4E-07 55.3 8.1 62 338-405 4-67 (164)
34 2pc6_A Probable acetolactate s 96.7 0.0049 1.7E-07 54.8 8.5 65 125-197 4-70 (165)
35 2jhe_A Transcription regulator 96.5 0.0088 3E-07 52.8 8.7 58 339-404 2-59 (190)
36 2pc6_A Probable acetolactate s 96.5 0.0075 2.6E-07 53.6 8.0 62 338-405 5-68 (165)
37 3s1t_A Aspartokinase; ACT doma 96.3 0.023 7.9E-07 51.1 10.4 106 258-369 15-131 (181)
38 4go7_X Aspartokinase; transfer 96.1 0.01 3.6E-07 54.4 7.2 121 21-157 21-150 (200)
39 2fgc_A Acetolactate synthase, 96.0 0.021 7.2E-07 51.8 8.7 66 125-198 29-96 (193)
40 2fgc_A Acetolactate synthase, 96.0 0.022 7.5E-07 51.7 8.6 63 337-405 29-93 (193)
41 4go7_X Aspartokinase; transfer 95.8 0.027 9.1E-07 51.6 8.5 131 257-404 33-177 (200)
42 3ab4_A Aspartokinase; aspartat 95.8 0.17 5.9E-06 51.4 15.4 109 35-156 263-378 (421)
43 3ab4_A Aspartokinase; aspartat 95.6 0.073 2.5E-06 54.2 11.7 104 257-369 262-379 (421)
44 2jhe_A Transcription regulator 95.4 0.057 1.9E-06 47.4 9.0 59 127-195 2-60 (190)
45 1y7p_A Hypothetical protein AF 95.2 0.028 9.6E-07 51.8 6.3 49 125-173 4-57 (223)
46 1y7p_A Hypothetical protein AF 95.0 0.038 1.3E-06 51.0 6.5 46 36-81 4-54 (223)
47 3c1m_A Probable aspartokinase; 94.2 0.34 1.2E-05 50.1 12.2 105 35-153 317-435 (473)
48 2qmx_A Prephenate dehydratase; 92.9 0.25 8.6E-06 47.5 7.9 67 337-405 200-267 (283)
49 3c1m_A Probable aspartokinase; 92.6 0.88 3E-05 46.9 12.2 116 257-386 316-454 (473)
50 3mwb_A Prephenate dehydratase; 91.8 0.39 1.3E-05 46.9 7.8 90 282-391 163-256 (313)
51 1sc6_A PGDH, D-3-phosphoglycer 91.0 0.39 1.3E-05 48.6 7.2 48 338-385 332-379 (404)
52 3luy_A Probable chorismate mut 91.0 0.88 3E-05 44.7 9.5 46 346-392 217-263 (329)
53 2qmw_A PDT, prephenate dehydra 90.6 0.95 3.2E-05 43.1 9.1 97 282-404 153-254 (267)
54 1ygy_A PGDH, D-3-phosphoglycer 90.4 1 3.5E-05 47.1 10.0 62 336-401 453-516 (529)
55 1ygy_A PGDH, D-3-phosphoglycer 90.4 0.78 2.7E-05 48.0 9.1 64 121-190 450-515 (529)
56 3tvi_A Aspartokinase; structur 88.9 0.9 3.1E-05 46.5 8.0 120 36-173 298-423 (446)
57 3tvi_A Aspartokinase; structur 87.7 2.2 7.6E-05 43.6 9.9 117 258-386 297-424 (446)
58 1sc6_A PGDH, D-3-phosphoglycer 87.3 1.6 5.4E-05 44.1 8.5 48 259-306 331-378 (404)
59 3k5p_A D-3-phosphoglycerate de 86.9 1.1 3.6E-05 45.6 6.9 62 20-86 329-390 (416)
60 3k5p_A D-3-phosphoglycerate de 85.9 3.4 0.00012 41.8 10.1 52 121-172 339-390 (416)
61 3mtj_A Homoserine dehydrogenas 85.3 1.7 5.7E-05 44.5 7.5 50 337-386 359-410 (444)
62 2cdq_A Aspartokinase; aspartat 85.2 3.6 0.00012 42.8 10.1 137 35-198 340-483 (510)
63 3mah_A Aspartokinase; aspartat 83.2 0.84 2.9E-05 39.6 3.7 113 35-173 17-135 (157)
64 2qmx_A Prephenate dehydratase; 79.1 4.9 0.00017 38.5 7.7 53 124-178 199-252 (283)
65 3luy_A Probable chorismate mut 77.8 14 0.00049 36.0 10.8 52 125-178 206-260 (329)
66 3mwb_A Prephenate dehydratase; 76.3 6.2 0.00021 38.3 7.6 51 123-173 199-251 (313)
67 2cdq_A Aspartokinase; aspartat 76.1 4.8 0.00016 41.8 7.2 120 258-386 340-469 (510)
68 2qmw_A PDT, prephenate dehydra 71.2 12 0.0004 35.5 8.0 51 123-173 184-238 (267)
69 3mtj_A Homoserine dehydrogenas 69.5 4.2 0.00014 41.5 4.8 40 120-159 354-393 (444)
70 3mah_A Aspartokinase; aspartat 69.5 3 0.0001 35.9 3.3 110 258-386 17-136 (157)
71 1phz_A Protein (phenylalanine 69.4 4.7 0.00016 40.8 5.0 66 337-405 34-100 (429)
72 1ib8_A Conserved protein SP14. 60.7 42 0.0014 29.1 8.9 87 272-364 14-106 (164)
73 1tdj_A Biosynthetic threonine 53.9 61 0.0021 33.5 10.3 130 36-173 338-483 (514)
74 1phz_A Protein (phenylalanine 48.0 24 0.00083 35.6 5.9 52 122-173 31-83 (429)
75 3g12_A Putative lactoylglutath 39.4 97 0.0033 24.5 7.5 49 35-90 66-115 (128)
76 3g12_A Putative lactoylglutath 35.1 95 0.0032 24.6 6.7 49 258-313 66-115 (128)
77 1tdj_A Biosynthetic threonine 30.6 1.4E+02 0.0048 30.7 8.5 117 260-383 339-481 (514)
78 1zvp_A Hypothetical protein VC 27.6 64 0.0022 27.0 4.4 47 122-173 68-117 (133)
79 1zhv_A Hypothetical protein AT 27.6 31 0.0011 29.0 2.4 47 122-173 59-108 (134)
80 2j0w_A Lysine-sensitive aspart 25.1 64 0.0022 32.6 4.7 120 35-173 307-433 (449)
81 1zhv_A Hypothetical protein AT 22.8 63 0.0022 27.1 3.4 28 345-374 73-100 (134)
82 2qsw_A Methionine import ATP-b 22.7 2.3E+02 0.0079 21.8 6.7 59 348-411 37-95 (100)
83 3ced_A Methionine import ATP-b 22.2 2.7E+02 0.0093 21.4 8.3 85 321-410 5-92 (98)
84 3dhx_A Methionine import ATP-b 22.1 2.6E+02 0.0089 21.8 7.0 61 349-414 36-96 (106)
85 1rwu_A Hypothetical UPF0250 pr 21.5 3.1E+02 0.011 21.9 8.0 65 34-105 34-101 (109)
86 3r6a_A Uncharacterized protein 21.2 2.6E+02 0.009 22.5 7.2 47 37-90 67-113 (144)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.78 E-value=1.2e-18 Score=161.70 Aligned_cols=143 Identities=13% Similarity=0.109 Sum_probs=113.2
Q ss_pred ceEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc-----
Q 044728 258 GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR----- 332 (450)
Q Consensus 258 ~~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~----- 332 (450)
..++|+|+|+||||||++++++|+++|+||++|++++..|.+.-.|.|..+.. ....+++.|++.|...+.+
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAK---DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSS---SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCc---cchhHHHHHHHHHHHHHHhcCCeE
Confidence 35689999999999999999999999999999999987665444788865421 2223577787777654321
Q ss_pred c--------CCCceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecC--ceeeeEEEEEeCCCCCCChHHHHHHHHH
Q 044728 333 R--------TSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRG--SQAVNVFYVVDASGNPVKSETIESVRKE 402 (450)
Q Consensus 333 r--------~~~~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g--~~a~D~F~v~~~~g~~l~~~~~~~L~~~ 402 (450)
+ ....++|+|.++|||||+++|+++|+++|+||..++..|.+ +++.++||++...+.+ .+.. ++|+++
T Consensus 81 ~~~~~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~~ 158 (195)
T 2nyi_A 81 SVAERHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVTA 158 (195)
T ss_dssp CC----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHHH
T ss_pred EEEeCCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHHH
Confidence 0 11358999999999999999999999999999999999998 8889999998876654 2335 777777
Q ss_pred Hhh
Q 044728 403 IGL 405 (450)
Q Consensus 403 l~~ 405 (450)
|..
T Consensus 159 l~~ 161 (195)
T 2nyi_A 159 LSR 161 (195)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.73 E-value=7.2e-17 Score=149.62 Aligned_cols=155 Identities=15% Similarity=0.191 Sum_probs=113.4
Q ss_pred CeEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEe-cCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCcc---CC
Q 044728 35 KATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS-DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRAR---SF 110 (450)
Q Consensus 35 ~~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t-~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~---~~ 110 (450)
..++|+|+|+||||||+.|+++|+++|+||++|++++ .+++++ .|.|..+. . .....++.|++.|..... +.
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~-~--~~~~~~~~l~~~L~~~~~~~~~~ 79 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNA-K--DGKLIQSALESALPGFQISTRRA 79 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESS-S--SSHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecC-c--cchhHHHHHHHHHHHHHHhcCCe
Confidence 3579999999999999999999999999999999997 555666 77776442 1 223467888888875431 11
Q ss_pred CCcceeeeccCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeC--CeEEEEEEEeecCCCCCCCCHHHHHH
Q 044728 111 RSLRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN--SRMASVVYITSEATGLPIDDPDTLAK 188 (450)
Q Consensus 111 ~~~~r~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~--~~~~d~f~V~~~~~g~~i~~~~~~~~ 188 (450)
......-. ......++|+|.|+||||+++.|+++|+++|+||.+++.+|.+ .+..+.|++... .+.+ ++.. +.
T Consensus 80 ~~~~~~~~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~-~~~~--~~~~-~~ 154 (195)
T 2nyi_A 80 SSVAERHV-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSR-VAFP--FPLY-QE 154 (195)
T ss_dssp CCC----C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEE-EEEE--GGGH-HH
T ss_pred EEEEeCCc-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEE-EEcC--CCcc-HH
Confidence 00000001 3445679999999999999999999999999999999999976 556677776652 2221 2335 77
Q ss_pred HHHHHHHhhh
Q 044728 189 IKRLLLYVLK 198 (450)
Q Consensus 189 l~~~L~~~l~ 198 (450)
|++.|..+..
T Consensus 155 l~~~l~~~a~ 164 (195)
T 2nyi_A 155 VVTALSRVEE 164 (195)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876554
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.73 E-value=1e-16 Score=148.05 Aligned_cols=139 Identities=16% Similarity=0.169 Sum_probs=109.9
Q ss_pred eEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc------
Q 044728 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR------ 332 (450)
Q Consensus 259 ~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~------ 332 (450)
..+|+|+|+||||++++++++|+++|+||.++++.+..|.+.-.|.|..+ +..++.|++.|.+....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-------~~~~~~l~~~L~~~~~~~~~~~~ 78 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-------PSNITRVETTLPLLGQQHDLITM 78 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-------HHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-------CCCHHHHHHHHHHHHHhcCCEEE
Confidence 46899999999999999999999999999999999987776668888643 13677888888765421
Q ss_pred --cC---C-----CceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecCc----eeeeEEEEEeCCCCCCChHHHHH
Q 044728 333 --RT---S-----EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGS----QAVNVFYVVDASGNPVKSETIES 398 (450)
Q Consensus 333 --r~---~-----~~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g~----~a~D~F~v~~~~g~~l~~~~~~~ 398 (450)
+. + ..++|+|.++||||++++|+++|+++|+||..++..|.++ +..+.|+++...+.+ .+...++
T Consensus 79 ~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~~ 157 (192)
T 1u8s_A 79 MKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLMQ 157 (192)
T ss_dssp EEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHHH
T ss_pred EEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHHH
Confidence 11 1 2489999999999999999999999999999999999985 689999998876544 2234567
Q ss_pred HHHHHhh
Q 044728 399 VRKEIGL 405 (450)
Q Consensus 399 L~~~l~~ 405 (450)
|+++|..
T Consensus 158 l~~~l~~ 164 (192)
T 1u8s_A 158 LQEEFDA 164 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777764
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.62 E-value=6e-15 Score=136.15 Aligned_cols=153 Identities=12% Similarity=0.114 Sum_probs=104.7
Q ss_pred eEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCc---cCCCC
Q 044728 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRA---RSFRS 112 (450)
Q Consensus 36 ~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~---~~~~~ 112 (450)
.++|+|+|+||||+++.++++|++.|+||.++++++..|.+.-.|.|..+. ...+.|++.|.... .+...
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~-------~~~~~l~~~L~~~~~~~~~~~~ 78 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP-------SNITRVETTLPLLGQQHDLITM 78 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH-------HHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC-------CCHHHHHHHHHHHHHhcCCEEE
Confidence 478999999999999999999999999999999998665554477775431 23445555543211 01000
Q ss_pred ccee--eeccCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeCC----eEEEEEEEeecCCCCCCCCHHHH
Q 044728 113 LRRS--VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNS----RMASVVYITSEATGLPIDDPDTL 186 (450)
Q Consensus 113 ~~r~--v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~----~~~d~f~V~~~~~g~~i~~~~~~ 186 (450)
..+. -........+.|+|.++||||++++|+++|+++|+||.+++..|.+. +..+.|++... .+.+ ++...
T Consensus 79 ~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~-~~~~--~~~~~ 155 (192)
T 1u8s_A 79 MKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAIS-ARVD--SGCNL 155 (192)
T ss_dssp EEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEE-EEEC--TTSCH
T ss_pred EEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEE-EeCC--CCCCH
Confidence 0000 00133456889999999999999999999999999999999999863 46677766552 2211 12235
Q ss_pred HHHHHHHHHhhh
Q 044728 187 AKIKRLLLYVLK 198 (450)
Q Consensus 187 ~~l~~~L~~~l~ 198 (450)
+.|++.|..+..
T Consensus 156 ~~l~~~l~~~~~ 167 (192)
T 1u8s_A 156 MQLQEEFDALCT 167 (192)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 778888876544
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.80 E-value=1.5e-07 Score=96.35 Aligned_cols=123 Identities=9% Similarity=-0.008 Sum_probs=90.1
Q ss_pred ceEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHH---Hh---
Q 044728 258 GYTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA---IK--- 331 (450)
Q Consensus 258 ~~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~---L~--- 331 (450)
...+|+|.|+||||+.+.+++.|+++|+||.+.+..+.+|++.-...+.-+.+. . ..+.|++.|... +.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~----~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-A----DGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-H----TSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-C----CHHHHHHHHHHHHHHcCeEE
Confidence 346899999999999999999999999999999999888876555555422110 0 125666666543 21
Q ss_pred ------c--cC--CCceEEEEeeCC-CcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEe
Q 044728 332 ------R--RT--SEGISLELCCED-RAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385 (450)
Q Consensus 332 ------~--r~--~~~t~iev~~~D-rpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~ 385 (450)
. +. ..++.+++.+.| +||++.+|+.+|+++|+||...+.-+......--|++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~ 150 (415)
T 3p96_A 86 SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSV 150 (415)
T ss_dssp EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEEC
T ss_pred EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeC
Confidence 0 11 135899999999 999999999999999999999887763333332366643
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.72 E-value=2e-07 Score=95.39 Aligned_cols=151 Identities=15% Similarity=0.078 Sum_probs=97.6
Q ss_pred CeEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCc---cCCC
Q 044728 35 KATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRA---RSFR 111 (450)
Q Consensus 35 ~~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~---~~~~ 111 (450)
..+.|+|.|+||||+.+.++++|+++|+||.+.+.++.+|++.=...+.-+++. .+ .+.|++.|.... .+..
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~~----~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-AD----GPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-HT----SHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-CC----HHHHHHHHHHHHHHcCeEE
Confidence 357899999999999999999999999999999999877766433333222211 11 134444442211 1100
Q ss_pred Cccee--eeccCCCceEEEEEEeCC-CcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCCHHHHHH
Q 044728 112 SLRRS--VGVQAALEHTTIELTGRD-RPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAK 188 (450)
Q Consensus 112 ~~~r~--v~~~~~~~~t~i~v~~~D-rpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~~~~g~~i~~~~~~~~ 188 (450)
..... -.......+..+++.+.| ++|++.+|+.+++++|+||.+.+..+......--|.+..+ + .+ .+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~~----~-~~---~~~ 157 (415)
T 3p96_A 86 SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVP----P-GA---DEA 157 (415)
T ss_dssp EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEECC----T-TC---HHH
T ss_pred EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeCC----C-CC---HHH
Confidence 00000 000134568899999999 9999999999999999999998887743334344666542 1 12 345
Q ss_pred HHHHHHHhhh
Q 044728 189 IKRLLLYVLK 198 (450)
Q Consensus 189 l~~~L~~~l~ 198 (450)
++..+.+.+.
T Consensus 158 l~~~l~~l~~ 167 (415)
T 3p96_A 158 LRTALNRVSS 167 (415)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 5666655443
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.61 E-value=1.1e-06 Score=76.55 Aligned_cols=112 Identities=9% Similarity=0.079 Sum_probs=75.5
Q ss_pred EEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhccCCCceE
Q 044728 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGIS 339 (450)
Q Consensus 260 t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~r~~~~t~ 339 (450)
..++|..+|+||.++++++.|++.|+||..-.+....+...-.|.+. + .++.++.|.+. .-......+
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~--------d---~~~a~~~L~~~-G~~v~~~sv 74 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS--------D---PDKAYKALKDN-HFAVNITDV 74 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES--------C---HHHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC--------C---HHHHHHHHHHc-CCeEeeeeE
Confidence 36888999999999999999999999999887754332222224332 1 23334444431 111111246
Q ss_pred EEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEE
Q 044728 340 LELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383 (450)
Q Consensus 340 iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v 383 (450)
+-+..+|+||.+++|+++|++.||||.+......+.++.-+|.+
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 77788899999999999999999999887755234445444433
No 8
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.58 E-value=9.8e-07 Score=76.94 Aligned_cols=112 Identities=17% Similarity=0.189 Sum_probs=76.4
Q ss_pred EEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCCCCccee
Q 044728 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSLRRS 116 (450)
Q Consensus 37 ~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~~~~~r~ 116 (450)
.+|+|..+|+||.++++++.|++.|+||..-.+....++..-.|.+. +. ++.++.|.....
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~--------d~---~~a~~~L~~~G~-------- 67 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS--------DP---DKAYKALKDNHF-------- 67 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES--------CH---HHHHHHHHHTTC--------
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC--------CH---HHHHHHHHHcCC--------
Confidence 58899999999999999999999999999887763222111124321 12 233444433221
Q ss_pred eeccCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEE
Q 044728 117 VGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYI 171 (450)
Q Consensus 117 v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V 171 (450)
......++.+..+|+||.+++++++|+++|+||.+...+..++...-+|.+
T Consensus 68 ----~v~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 68 ----AVNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp ----CEEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred ----eEeeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 001124677788999999999999999999999887766334455545544
No 9
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=98.13 E-value=0.0025 Score=68.16 Aligned_cols=267 Identities=12% Similarity=0.157 Sum_probs=157.0
Q ss_pred EEEEEE-cCCCcchHHHHHHHHHhCCceEEEEEEEe-cCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCCCC--
Q 044728 37 TLIKVD-SANKRGSLLELVQVLNDLDLIIRRAYISS-DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS-- 112 (450)
Q Consensus 37 ~~V~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t-~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~~~-- 112 (450)
+.|+|. .++.||.++++...|++.|++|.-...+. .+|..--+|.|...+- +...+.+++ +.......++
T Consensus 271 ~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~~-----~~a~~~l~~-~~~el~~~~~~~ 344 (600)
T 3l76_A 271 AKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLL-----NTAEAVTSA-IAPALRSYPEAD 344 (600)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGGH-----HHHHHHHHH-HGGGGSSSTTCS
T ss_pred EEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHHH-----HHHHHHHHH-HHHHhhcccccc
Confidence 445554 47999999999999999999996444332 4555544576633211 111122222 2211100000
Q ss_pred cceeeeccCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCCHHHHHHH
Q 044728 113 LRRSVGVQAALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKI 189 (450)
Q Consensus 113 ~~r~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~~~~g~~i~~~~~~~~l 189 (450)
....+ ....+...|.|++. .+||..+++..+|+++|+||.... |. ...-.|.|.. +..++.
T Consensus 345 ~~~~v--~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~Is~vI~~----------~d~~~A 408 (600)
T 3l76_A 345 QEAEI--IVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVKVSCVIDQ----------RDADRA 408 (600)
T ss_dssp SSSEE--EEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEG----------GGHHHH
T ss_pred Cccee--EecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCEEEEEEcH----------HHHHHH
Confidence 01122 23566888999985 799999999999999999997665 32 2344455554 122344
Q ss_pred HHHHHHhhhccccccccccccccccchhhhHHHHhhhccccccccccCCCCCCCCCCCEEEEEeccCCceEEEEEE-ecC
Q 044728 190 KRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDKGYTVVNLR-CPD 268 (450)
Q Consensus 190 ~~~L~~~l~~~~d~~~~~~~~s~~~~~l~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~-~~D 268 (450)
.+.|++.+..+. . +. . .+ ....+. ..-.-|..+ .+.+.|+|. .+|
T Consensus 409 v~aLh~~f~~~~-t---~~-~--------~~-------~~~~~~----------~~v~Gia~~----~~~a~i~i~~~~~ 454 (600)
T 3l76_A 409 IAALSNAFGVTL-S---PP-K--------NQ-------TDTSHL----------PAVRGVALD----QDQAQIAIRHVPD 454 (600)
T ss_dssp HHHHHHHTTCCB-C---CC-C--------CC-------CC---C----------CSCCEEEEE----CSEEEEEEEEEES
T ss_pred HHHHHHhhcccC-C---Cc-c--------cc-------cccccc----------CceEEEEee----CCEEEEEEecCCC
Confidence 456666554321 0 00 0 00 000010 001233332 355566664 589
Q ss_pred CcChHHHHHHHHHhCCceEEEEEEEec----CC--eEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhccC--------
Q 044728 269 RPKLLFDAVCTLTDMQYVVYHATVIAE----SP--EAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRT-------- 334 (450)
Q Consensus 269 rpGLl~~i~~~L~~~glnI~~A~I~t~----~g--~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~r~-------- 334 (450)
+||+.+++...|++.|+||.--..... +| ..--+|.|.. ...++..+.|++. ....
T Consensus 455 ~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---------~d~~~a~~~l~~~-~~~~~~~~v~~~ 524 (600)
T 3l76_A 455 RPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---------GDSSQAEAILQPL-IKDWLDAAIVVN 524 (600)
T ss_dssp STTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH---------HHHHHHHHHHHHH-TTTSTTCEEEEE
T ss_pred CccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH---------HHHHHHHHHHHHH-HHhcCCceEEEe
Confidence 999999999999999999954333221 24 3344566653 2444445555542 2211
Q ss_pred CCceEEEEee---CCCcchHHHHHHHHHHCCceEEEEE
Q 044728 335 SEGISLELCC---EDRAGLLSDVTRIFRENGLSVTRAE 369 (450)
Q Consensus 335 ~~~t~iev~~---~DrpGLL~~It~~l~~~gi~I~~Ak 369 (450)
+.-..|.|.+ ..+||+.+++.++|++.||||....
T Consensus 525 ~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 525 KAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp CCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred CCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 2346788877 4999999999999999999998866
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.09 E-value=1.8e-05 Score=62.99 Aligned_cols=67 Identities=12% Similarity=0.221 Sum_probs=53.2
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCCHHHHHHHHHHHHHhh
Q 044728 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197 (450)
Q Consensus 124 ~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~~~~g~~i~~~~~~~~l~~~L~~~l 197 (450)
....|+|.++||||++++|+++|+++|+||.+....+.++.+...+.+.-+ + ...++.|.+.|.++.
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~-----~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--E-----KQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--S-----CCCHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--C-----CCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999998877777777777542 2 123567777776544
No 11
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.04 E-value=3.6e-05 Score=61.22 Aligned_cols=64 Identities=6% Similarity=0.033 Sum_probs=49.9
Q ss_pred eEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHH
Q 044728 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEA 328 (450)
Q Consensus 259 ~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~ 328 (450)
...|.|.++||||++++++++|+++|+||.+....+.+|.+.-.+.+.-++.. ..+.|.+.|.+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~------~l~~l~~~L~~ 68 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQ------DFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCC------CHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCC------CHHHHHHHHHH
Confidence 35799999999999999999999999999999998877877666666433211 35566666654
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.98 E-value=2.8e-05 Score=61.19 Aligned_cols=64 Identities=6% Similarity=0.193 Sum_probs=50.7
Q ss_pred ceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHHHhh
Q 044728 337 GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGL 405 (450)
Q Consensus 337 ~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~~ 405 (450)
.+.|.|.+.||||+|++|+++|++.|+||.++.+.+.++.+...|.+...+ ...++++.++|.+
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~~-----~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKN-----TDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEESS-----HHHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEECC-----HHHHHHHHHHHhc
Confidence 357899999999999999999999999999999988766666666664432 3456677777764
No 13
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.80 E-value=0.0001 Score=57.93 Aligned_cols=63 Identities=17% Similarity=0.312 Sum_probs=47.8
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCCHHHHHHHHHHHH
Q 044728 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLL 194 (450)
Q Consensus 125 ~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~~~~g~~i~~~~~~~~l~~~L~ 194 (450)
.+.|.|.+.|+||+|++|+++|++.|+||.+....+.++.+...|.+... +...++++.+.|.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-------~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-------NTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-------SHHHHHHHHHHHT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-------CHHHHHHHHHHHh
Confidence 56788999999999999999999999999999998865555555555441 3445555555553
No 14
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.61 E-value=0.00052 Score=61.16 Aligned_cols=102 Identities=13% Similarity=0.226 Sum_probs=72.8
Q ss_pred ceEEEEEE-ecCCcChHHHHHHHHHhCCceEEEEEEEe-cCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHH---Hhc
Q 044728 258 GYTVVNLR-CPDRPKLLFDAVCTLTDMQYVVYHATVIA-ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA---IKR 332 (450)
Q Consensus 258 ~~t~v~V~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t-~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~---L~~ 332 (450)
+.+.|+|. .+|+||.++++...|+++|+||..-.... .+|...-+|.|... ..++..+.|.+. +..
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~---------~~~~a~~~l~~~~~~l~~ 94 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG---------DYKQTLEILSERQDSIGA 94 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG---------GHHHHHHHHHHSSTTTTC
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech---------HHHHHHHHHHHHHHHcCC
Confidence 56788888 49999999999999999999998765432 24555556777631 223333444432 111
Q ss_pred c----CCCceEEEEeeCC---CcchHHHHHHHHHHCCceEEEE
Q 044728 333 R----TSEGISLELCCED---RAGLLSDVTRIFRENGLSVTRA 368 (450)
Q Consensus 333 r----~~~~t~iev~~~D---rpGLL~~It~~l~~~gi~I~~A 368 (450)
. ......+.|.+.+ +||+++++.++|++.||||+..
T Consensus 95 ~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 95 ASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp SEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred ceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 0 0234789999987 9999999999999999999994
No 15
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.55 E-value=0.00071 Score=60.25 Aligned_cols=110 Identities=13% Similarity=0.148 Sum_probs=74.8
Q ss_pred CCeEEEEEE-cCCCcchHHHHHHHHHhCCceEEEEEEE-ecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCCC
Q 044728 34 RKATLIKVD-SANKRGSLLELVQVLNDLDLIIRRAYIS-SDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFR 111 (450)
Q Consensus 34 ~~~~~V~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~-t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~~ 111 (450)
++.+.|+|. .+|+||.++++.++|++.|+||.--... +.+|...-+|.|...+. ++..+.+++ +..... .
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~-----~~a~~~l~~-~~~~l~--~ 94 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDY-----KQTLEILSE-RQDSIG--A 94 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGH-----HHHHHHHHH-SSTTTT--C
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHH-----HHHHHHHHH-HHHHcC--C
Confidence 356889998 5999999999999999999999876664 23454444576633111 222233333 221111 0
Q ss_pred CcceeeeccCCCceEEEEEEeCC---CcchHHHHHHHHHhCCceEEEE
Q 044728 112 SLRRSVGVQAALEHTTIELTGRD---RPGLLSEVFAVLSDLKCNVMGA 156 (450)
Q Consensus 112 ~~~r~v~~~~~~~~t~i~v~~~D---rpGLl~~i~~~L~~~glnI~~A 156 (450)
..+ ....+...+.|.+.+ +||.++++..+|+++|+||...
T Consensus 95 ---~~i--~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 95 ---ASI--DGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp ---SEE--EEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred ---ceE--EecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 111 234568899999976 9999999999999999999984
No 16
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.48 E-value=0.0039 Score=60.52 Aligned_cols=117 Identities=8% Similarity=0.038 Sum_probs=69.9
Q ss_pred eEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCCCCc
Q 044728 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS--DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRSL 113 (450)
Q Consensus 36 ~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~~~~ 113 (450)
.+.++|.|+||||+.+.|+++|+++|+||.+.+.++ ..|++.=...+.-+++ ..+.+ .|++.|..... ..
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-~~~~~----~L~~~f~~la~-~~-- 77 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK-VIPLA----SLRTGFGVIAA-KF-- 77 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC-CCCHH----HHHHHHHHHHH-HT--
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC-CCCHH----HHHHHHHHHHH-Hc--
Confidence 368999999999999999999999999999999985 4576654444433332 22323 44444422110 00
Q ss_pred ceeeeccCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe
Q 044728 114 RRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT 160 (450)
Q Consensus 114 ~r~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t 160 (450)
.-.+..........|-|....+-.-|.+|-.....-.+++.-+-+.+
T Consensus 78 ~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 78 TMGWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp TCEEEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred CCEEEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 01122211222344555555555577777777776666655454554
No 17
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.41 E-value=0.0028 Score=61.52 Aligned_cols=116 Identities=9% Similarity=0.026 Sum_probs=66.4
Q ss_pred CeEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCCCC
Q 044728 35 KATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS--DGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS 112 (450)
Q Consensus 35 ~~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~~~ 112 (450)
..+.++|.|+||||+.+.|+++|+++|+||.+.+.++ ..|++.=...+ +..+..+ + .|++.|..... ..
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~-~~~~~~~--~----~L~~~f~~la~-~~- 76 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSV-EIPVAGV--N----DFNSAFGKVVE-KY- 76 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEE-ECCC-----C----HHHHHHHHHHG-GG-
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEE-EcCCCCH--H----HHHHHHHHHHH-Hc-
Confidence 4578999999999999999999999999999999985 45766433332 2222111 2 34444422110 00
Q ss_pred cceeeeccCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe
Q 044728 113 LRRSVGVQAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWT 160 (450)
Q Consensus 113 ~~r~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t 160 (450)
.-.+..........|-|....+-.-|.+|-.....-.+++.=+-+.+
T Consensus 77 -~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 123 (287)
T 3nrb_A 77 -NAEWWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIIS 123 (287)
T ss_dssp -TCEEEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred -CCeeEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEe
Confidence 01122211112233444444444567777777766666555444555
No 18
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.38 E-value=0.0048 Score=59.82 Aligned_cols=46 Identities=9% Similarity=0.070 Sum_probs=39.2
Q ss_pred eEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEE
Q 044728 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS--DGEWFMDVFH 81 (450)
Q Consensus 36 ~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t--~~g~~~d~F~ 81 (450)
.+.++|.|+||||+.+.++++|++.|+||.+.+.++ ..|++.=...
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~ 55 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVE 55 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEE
Confidence 378999999999999999999999999999999996 4566643333
No 19
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.36 E-value=0.0016 Score=58.67 Aligned_cols=114 Identities=11% Similarity=0.117 Sum_probs=77.0
Q ss_pred CceEEEEE-EecCCcChHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc
Q 044728 257 KGYTVVNL-RCPDRPKLLFDAVCTLTDMQYVVYHATVIAE---SPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR 332 (450)
Q Consensus 257 ~~~t~v~V-~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~ 332 (450)
.+.+.|+| ..+|+||.++++...|++.|+||..-...+. ++..--.|.+.. ...++..+.|.+....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~---------~d~~~a~~~l~~~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR---------SDGRRAMEILKKLQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH---------HHHHHHHHHHHTTTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc---------ccHHHHHHHHHHHHHh
Confidence 35667777 4699999999999999999999987655543 333333477653 1333444445432111
Q ss_pred ---c----CCCceEEEEeeC---CCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEE
Q 044728 333 ---R----TSEGISLELCCE---DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYV 383 (450)
Q Consensus 333 ---r----~~~~t~iev~~~---DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v 383 (450)
. .....+|.|.+. ++||+++++.++|++.||||.... |.. ..-.|.|
T Consensus 84 ~~~~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is--tSe--~~Is~vV 140 (178)
T 2dtj_A 84 GNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS--TSE--IRISVLI 140 (178)
T ss_dssp TTCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EET--TEEEEEE
T ss_pred cCCCeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE--cCC--CeEEEEE
Confidence 1 123467788887 899999999999999999999943 322 3335666
No 20
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.35 E-value=0.003 Score=61.68 Aligned_cols=47 Identities=17% Similarity=0.285 Sum_probs=39.9
Q ss_pred eEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEE
Q 044728 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD--GEWFMDVFHV 82 (450)
Q Consensus 36 ~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~--~g~~~d~F~V 82 (450)
.+.++|.|+||||+.+.|+++|++.|+||.+.+.+++ .|++.=...+
T Consensus 22 ~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~ 70 (302)
T 3o1l_A 22 TFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEI 70 (302)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEE
Confidence 4689999999999999999999999999999999974 5766534333
No 21
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.27 E-value=0.0077 Score=58.43 Aligned_cols=106 Identities=15% Similarity=0.153 Sum_probs=68.4
Q ss_pred eEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHH---Hhc-
Q 044728 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA--ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA---IKR- 332 (450)
Q Consensus 259 ~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~---L~~- 332 (450)
...++|.|+||||+.+++++.|+++|+||.+.+.++ ..|++.-...+.-+.+ .. ..+.|++.|... +.-
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-~~----~~~~L~~~f~~la~~~~m~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK-VI----PLASLRTGFGVIAAKFTMG 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC-CC----CHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC-CC----CHHHHHHHHHHHHHHcCCE
Confidence 357999999999999999999999999999999875 3566554444432222 12 245666666542 210
Q ss_pred ----cCCCceEEEEeeCCCcchHHHHHHHHHHCCceEEEEE
Q 044728 333 ----RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369 (450)
Q Consensus 333 ----r~~~~t~iev~~~DrpGLL~~It~~l~~~gi~I~~Ak 369 (450)
...+...|-|-.--+---|.+|-.....-.++++-+-
T Consensus 81 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~ 121 (288)
T 3obi_A 81 WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTA 121 (288)
T ss_dssp EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEE
Confidence 1223334444444444577788877777666655433
No 22
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.25 E-value=0.0031 Score=56.68 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=73.5
Q ss_pred CCeEEEEE-EcCCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCcc-
Q 044728 34 RKATLIKV-DSANKRGSLLELVQVLNDLDLIIRRAYISSD---GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRAR- 108 (450)
Q Consensus 34 ~~~~~V~V-~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~- 108 (450)
++.+.|+| ..+|+||.++++.+.|++.|+||.--...+. +|..--.|.+...+ .++.++.|.....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~d---------~~~a~~~l~~~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSD---------GRRAMEILKKLQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHH---------HHHHHHHHHTTTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcccc---------HHHHHHHHHHHHHh
Confidence 46688888 4699999999999999999999986655532 33332236653311 1223344432110
Q ss_pred CCCCcceeeeccCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 044728 109 SFRSLRRSVGVQAALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNVMGA 156 (450)
Q Consensus 109 ~~~~~~r~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI~~A 156 (450)
.. ...+ ....+...|.|+|. ++||.++++..+|++.|+||...
T Consensus 84 ~~---~~~v--~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~i 129 (178)
T 2dtj_A 84 GN---WTNV--LYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 129 (178)
T ss_dssp TT---CSEE--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred cC---CCeE--EEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 00 0112 23456788888885 89999999999999999999884
No 23
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.19 E-value=0.0077 Score=58.35 Aligned_cols=102 Identities=12% Similarity=0.076 Sum_probs=63.4
Q ss_pred eEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc----
Q 044728 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA--ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR---- 332 (450)
Q Consensus 259 ~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~---- 332 (450)
...++|.|+||||+++++++.|+++|+||.+.+.++ ..|++.-...+..+. .. ..+.|++.|.+.-.+
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~--~~----~~~~L~~~f~~la~~l~m~ 81 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD--DF----DEAGFRAGLAERSEAFGMA 81 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS--SC----CHHHHHHHHHHHHGGGTCE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC--CC----CHHHHHHHHHHHHHHcCCE
Confidence 357999999999999999999999999999999885 356654344443222 12 356677777543211
Q ss_pred ----cCCCceEEEEeeCCCcchHHHHHHHHHHCCceEE
Q 044728 333 ----RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366 (450)
Q Consensus 333 ----r~~~~t~iev~~~DrpGLL~~It~~l~~~gi~I~ 366 (450)
...+...|=|-+--+---|.+|-.....-.++.+
T Consensus 82 ~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~ 119 (286)
T 3n0v_A 82 FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMD 119 (286)
T ss_dssp EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCE
T ss_pred EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcE
Confidence 1122223333333333466666666665555443
No 24
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.18 E-value=0.0069 Score=59.10 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=62.5
Q ss_pred EEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHH---Hhc--
Q 044728 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAE--SPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA---IKR-- 332 (450)
Q Consensus 260 t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~--~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~---L~~-- 332 (450)
.+++|.|+||||++++|++.|+++|+||.+++.++. .|++.=...+.-+.+ .. ..+.|+++|... +.-
T Consensus 23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~-~~----~~~~L~~~l~~la~~l~m~~ 97 (302)
T 3o1l_A 23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL-PF----DLDGFREAFTPIAEEFSMDW 97 (302)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS-SS----CHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC-CC----CHHHHHHHHHHHHHHhCCee
Confidence 479999999999999999999999999999998874 566554444432221 11 245666666432 211
Q ss_pred ---cCCCceEEEEeeCCCcchHHHHHHHHHHCCceEE
Q 044728 333 ---RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVT 366 (450)
Q Consensus 333 ---r~~~~t~iev~~~DrpGLL~~It~~l~~~gi~I~ 366 (450)
...+...|-|-+--+---|.+|-.....-.++.+
T Consensus 98 ~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~ 134 (302)
T 3o1l_A 98 RITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCD 134 (302)
T ss_dssp EEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSE
T ss_pred eecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcE
Confidence 1122222333322233356677666666555443
No 25
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.17 E-value=0.0079 Score=58.46 Aligned_cols=42 Identities=10% Similarity=0.193 Sum_probs=37.9
Q ss_pred eEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEe--cCCeEE
Q 044728 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISS--DGEWFM 77 (450)
Q Consensus 36 ~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t--~~g~~~ 77 (450)
.+.++|.|+||||+.+.|+++|++.|+||.+.+.++ ..|++.
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ff 53 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFF 53 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEE
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceE
Confidence 478999999999999999999999999999999996 457664
No 26
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.13 E-value=0.0031 Score=56.06 Aligned_cols=109 Identities=11% Similarity=0.146 Sum_probs=73.0
Q ss_pred CCeEEEEEEc-CCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccC
Q 044728 34 RKATLIKVDS-ANKRGSLLELVQVLNDLDLIIRRAYISSD---GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARS 109 (450)
Q Consensus 34 ~~~~~V~V~~-~DrpGLl~~i~~~L~~~glnI~~A~i~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~ 109 (450)
++.+.|+|.. +|+||.++++.++|++.|+||.--..... .|...-+|.|...+. ++..+.|++...+.. .
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~-----~~a~~~L~~~~~~~~-~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA-----QEALEALEPVLAEIG-G 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH-----HHHHHHHHHHHHHHC-C
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH-----HHHHHHHHHHHHHhC-C
Confidence 4667888876 99999999999999999999986554322 344434577644221 122223332111111 0
Q ss_pred CCCcceeeeccCCCceEEEEEEeCC---CcchHHHHHHHHHhCCceEEEE
Q 044728 110 FRSLRRSVGVQAALEHTTIELTGRD---RPGLLSEVFAVLSDLKCNVMGA 156 (450)
Q Consensus 110 ~~~~~r~v~~~~~~~~t~i~v~~~D---rpGLl~~i~~~L~~~glnI~~A 156 (450)
.+ ....+...+.|+|.+ +||.++++..+|++.|+||...
T Consensus 88 ------~v--~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 88 ------EA--ILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp ------EE--EEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred ------cE--EEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 11 234567889999976 9999999999999999999443
No 27
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.12 E-value=0.002 Score=57.27 Aligned_cols=120 Identities=9% Similarity=0.060 Sum_probs=76.9
Q ss_pred CceEEEEEEe-cCCcChHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc
Q 044728 257 KGYTVVNLRC-PDRPKLLFDAVCTLTDMQYVVYHATVIAE---SPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR 332 (450)
Q Consensus 257 ~~~t~v~V~~-~DrpGLl~~i~~~L~~~glnI~~A~I~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~ 332 (450)
.+.+.|+|.+ +|+||.++++..+|++.|+||..-..... .|..--+|.|...+. ++..++-+.+...+.-
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~------~~a~~~L~~~~~~~~~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA------QEALEALEPVLAEIGG 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH------HHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH------HHHHHHHHHHHHHhCC
Confidence 4566777776 89999999999999999999987543322 234555677764211 1111221223222321
Q ss_pred c---CCCceEEEEeeCC---CcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeC
Q 044728 333 R---TSEGISLELCCED---RAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDA 386 (450)
Q Consensus 333 r---~~~~t~iev~~~D---rpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~~ 386 (450)
. .+...++.|.+.+ +||+++++.++|++.||||.... |- +. .-.|.|...
T Consensus 88 ~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is--~S-e~-~is~vv~~~ 143 (167)
T 2dt9_A 88 EAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA--TS-EV-RISVIIPAE 143 (167)
T ss_dssp EEEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE--EC-SS-EEEEEEEGG
T ss_pred cEEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE--cc-CC-EEEEEEeHH
Confidence 1 1234668899886 99999999999999999996543 33 22 345656433
No 28
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.10 E-value=0.01 Score=57.62 Aligned_cols=107 Identities=14% Similarity=0.156 Sum_probs=63.9
Q ss_pred eEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEecC-CCCCCCcHHHHHHHHHHHHHH---Hhc
Q 044728 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA--ESPEAYQEYYIRHV-DGNPISSEAERQRVINCLEAA---IKR 332 (450)
Q Consensus 259 ~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t--~~g~~~d~F~V~~~-~g~~~~~~~~~~~l~~~L~~~---L~~ 332 (450)
...++|.|+||||+++++++.|+++|+||.+++.++ ..|++.-...+.-+ .+... ..+.|++.|.+. +.-
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~la~~~~m 85 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEPIAERFRM 85 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHHHHHhcCc
Confidence 457999999999999999999999999999999885 35665433333321 01012 245666666542 211
Q ss_pred -----cCCCceEEEEeeCCCcchHHHHHHHHHHCCceEEEEE
Q 044728 333 -----RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRAE 369 (450)
Q Consensus 333 -----r~~~~t~iev~~~DrpGLL~~It~~l~~~gi~I~~Ak 369 (450)
...+...|=|-+--+---|.+|-.....-.++++-+-
T Consensus 86 ~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~ 127 (292)
T 3lou_A 86 QWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVG 127 (292)
T ss_dssp EEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEE
T ss_pred EEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEE
Confidence 1122223333332233367777777766655544333
No 29
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.98 E-value=0.018 Score=55.86 Aligned_cols=103 Identities=12% Similarity=0.140 Sum_probs=64.1
Q ss_pred eEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc----
Q 044728 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIA--ESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR---- 332 (450)
Q Consensus 259 ~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~---- 332 (450)
...++|.|+||||+++++++.|+++|+||.+++.++ ..|++.=...+.. .+ . ..+.|++.|...-.+
T Consensus 7 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~-~~--~----~~~~L~~~f~~la~~~~m~ 79 (287)
T 3nrb_A 7 QYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI-PV--A----GVNDFNSAFGKVVEKYNAE 79 (287)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC-CC---------CHHHHHHHHHHGGGTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc-CC--C----CHHHHHHHHHHHHHHcCCe
Confidence 467999999999999999999999999999999875 3565543333332 11 1 233666666543211
Q ss_pred ----cCCCceEEEEeeCCCcchHHHHHHHHHHCCceEEEE
Q 044728 333 ----RTSEGISLELCCEDRAGLLSDVTRIFRENGLSVTRA 368 (450)
Q Consensus 333 ----r~~~~t~iev~~~DrpGLL~~It~~l~~~gi~I~~A 368 (450)
...+...|-|-.--+---|.+|-.....-.++++-+
T Consensus 80 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~ 119 (287)
T 3nrb_A 80 WWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVV 119 (287)
T ss_dssp EEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEE
T ss_pred eEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEE
Confidence 112233343333333457777777777766654433
No 30
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.94 E-value=0.0027 Score=56.48 Aligned_cols=65 Identities=17% Similarity=0.234 Sum_probs=51.3
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeC--CeEEEEEEEeecCCCCCCCCHHHHHHHHHHHHHhh
Q 044728 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN--SRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197 (450)
Q Consensus 125 ~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~--~~~~d~f~V~~~~~g~~i~~~~~~~~l~~~L~~~l 197 (450)
...|.|...|+||+|++|+++|+++|+||.+..+.+.. +...-+|.|.. ++..+++|.+.|.++.
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcCCC
Confidence 36789999999999999999999999999999987542 55566666653 2467788888887643
No 31
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.78 E-value=0.16 Score=54.06 Aligned_cols=191 Identities=14% Similarity=0.174 Sum_probs=119.0
Q ss_pred CCeEEEEEEc---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCC
Q 044728 34 RKATLIKVDS---ANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF 110 (450)
Q Consensus 34 ~~~~~V~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~ 110 (450)
.+...|.|.+ ..+||..+++..+|.+.|+||.-.. +. ...+ +|.|...+ .++..+.|.+.+......+
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~~I-s~vI~~~d-----~~~Av~aLh~~f~~~~t~~ 423 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EVKV-SCVIDQRD-----ADRAIAALSNAFGVTLSPP 423 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SSEE-EEEEEGGG-----HHHHHHHHHHHTTCCBCCC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CCEE-EEEEcHHH-----HHHHHHHHHHhhcccCCCc
Confidence 4667888886 4899999999999999999997554 33 2222 35554332 1345666777765431100
Q ss_pred C-----Ccceeee-ccCCCceEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEee----CC--eEEEEEEEeecCCC
Q 044728 111 R-----SLRRSVG-VQAALEHTTIELT-GRDRPGLLSEVFAVLSDLKCNVMGAEVWTH----NS--RMASVVYITSEATG 177 (450)
Q Consensus 111 ~-----~~~r~v~-~~~~~~~t~i~v~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~----~~--~~~d~f~V~~~~~g 177 (450)
. .....|. ...+.+...|+|. .+|+||..++|.+.|+++|+||.-...... .| ...-.|.|..
T Consensus 424 ~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---- 499 (600)
T 3l76_A 424 KNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---- 499 (600)
T ss_dssp CCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH----
T ss_pred cccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH----
Confidence 0 0011122 2445667777775 489999999999999999999965544432 13 2344666655
Q ss_pred CCCCCHHHHHHHHHHHHHhhhccccccccccccccccchhhhHHHHhhhccccccccccCCCCCCCCCCCEEEEEeccCC
Q 044728 178 LPIDDPDTLAKIKRLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMNYAESGSASGRSKPLVTVESCTDK 257 (450)
Q Consensus 178 ~~i~~~~~~~~l~~~L~~~l~~~~d~~~~~~~~s~~~~~l~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~ 257 (450)
+.+++..+.|.+ +..+. . ...|.++ .
T Consensus 500 ------~d~~~a~~~l~~-~~~~~------------------------------~-------------~~~v~~~----~ 525 (600)
T 3l76_A 500 ------GDSSQAEAILQP-LIKDW------------------------------L-------------DAAIVVN----K 525 (600)
T ss_dssp ------HHHHHHHHHHHH-HTTTS------------------------------T-------------TCEEEEE----C
T ss_pred ------HHHHHHHHHHHH-HHHhc------------------------------C-------------CceEEEe----C
Confidence 222333333332 22111 0 1123332 2
Q ss_pred ceEEEEEEe---cCCcChHHHHHHHHHhCCceEEEEE
Q 044728 258 GYTVVNLRC---PDRPKLLFDAVCTLTDMQYVVYHAT 291 (450)
Q Consensus 258 ~~t~v~V~~---~DrpGLl~~i~~~L~~~glnI~~A~ 291 (450)
+...|.|.| +.+||.-+++..+|++.|+||..-.
T Consensus 526 ~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 526 AIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp CEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred CeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 456677775 6899999999999999999997543
No 32
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.75 E-value=0.012 Score=53.12 Aligned_cols=111 Identities=13% Similarity=0.155 Sum_probs=73.3
Q ss_pred CCeEEEEEE-cCCCcchHHHHHHHHHhCCceEEEEEEEe-c--CCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccC
Q 044728 34 RKATLIKVD-SANKRGSLLELVQVLNDLDLIIRRAYISS-D--GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARS 109 (450)
Q Consensus 34 ~~~~~V~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t-~--~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~ 109 (450)
++.+.|+|. .+|+||.++++...|++.|+||.--.... . +|..--+|.|...+-.+ ..+.+++++..+..
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~~--a~~~L~~~~~el~~---- 87 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPA--AVEKLDSLRNEIGF---- 87 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHHH--HHHHHHHTHHHHCC----
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHHH--HHHHHHHHHHhcCc----
Confidence 345666664 59999999999999999999997555432 2 46555567764432110 01112222222210
Q ss_pred CCCcceeeeccCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 044728 110 FRSLRRSVGVQAALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNVMGAE 157 (450)
Q Consensus 110 ~~~~~r~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI~~A~ 157 (450)
..+. ...+...+.++|. +.||..+++..+|++.|+||....
T Consensus 88 -----~~v~--~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 88 -----SQLL--YDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp -----SEEE--EESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -----ceEE--EeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 1122 2456788888875 899999999999999999998876
No 33
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.75 E-value=0.004 Score=55.34 Aligned_cols=62 Identities=19% Similarity=0.324 Sum_probs=49.2
Q ss_pred eEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecC--ceeeeEEEEEeCCCCCCChHHHHHHHHHHhh
Q 044728 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRG--SQAVNVFYVVDASGNPVKSETIESVRKEIGL 405 (450)
Q Consensus 338 t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g--~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~~ 405 (450)
+.|.|...|+||+|++|+.+|++.|+||.++.+.+.. +...-+|.+. .+ +..+++|.++|.+
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~d-----~~~leqI~kqL~K 67 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-GD-----EKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-SC-----HHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-cc-----HHHHHHHHHHHcC
Confidence 5789999999999999999999999999999987543 3455556554 22 4577888888876
No 34
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.73 E-value=0.0049 Score=54.80 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=51.7
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEee--CCeEEEEEEEeecCCCCCCCCHHHHHHHHHHHHHhh
Q 044728 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTH--NSRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVL 197 (450)
Q Consensus 125 ~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~--~~~~~d~f~V~~~~~g~~i~~~~~~~~l~~~L~~~l 197 (450)
...|.|...|+||+|++|+++|+++|+||.+..+.+. .+...-+|.|.. ++..+++|.+.|.++.
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999988753 355666666664 2457788888887643
No 35
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.49 E-value=0.0088 Score=52.82 Aligned_cols=58 Identities=29% Similarity=0.495 Sum_probs=43.0
Q ss_pred EEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHHHh
Q 044728 339 SLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIG 404 (450)
Q Consensus 339 ~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~ 404 (450)
.|+|.+.||+|+|++|+++|+++++||..+.+.+.|. +|+.-+. ........|.+.+.
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~~---~~~~~~~~L~~~l~ 59 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFAE---LEFESFSSLMAEIR 59 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEECC---CCHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEEe---CCHHHHHHHHHHHH
Confidence 4899999999999999999999999999999977642 5554441 12234455555444
No 36
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.48 E-value=0.0075 Score=53.59 Aligned_cols=62 Identities=21% Similarity=0.329 Sum_probs=48.9
Q ss_pred eEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecC--ceeeeEEEEEeCCCCCCChHHHHHHHHHHhh
Q 044728 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRG--SQAVNVFYVVDASGNPVKSETIESVRKEIGL 405 (450)
Q Consensus 338 t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g--~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~~ 405 (450)
+.|.|...|+||+|++|+.+|++.|+||.++.+.+.. +...-+|-+... +..+++|.++|.+
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d------~~~leql~kQL~K 68 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP------DEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC------HHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc------HHHHHHHHHHhcC
Confidence 5789999999999999999999999999999986433 345555655422 4577888888876
No 37
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.31 E-value=0.023 Score=51.14 Aligned_cols=106 Identities=10% Similarity=0.097 Sum_probs=70.4
Q ss_pred ceEEEEE-EecCCcChHHHHHHHHHhCCceEEEEEEE-ec--CCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc-
Q 044728 258 GYTVVNL-RCPDRPKLLFDAVCTLTDMQYVVYHATVI-AE--SPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR- 332 (450)
Q Consensus 258 ~~t~v~V-~~~DrpGLl~~i~~~L~~~glnI~~A~I~-t~--~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~- 332 (450)
+.+.|+| ..+|+||.++++...|++.|+||.--... +. .|..--+|.|...+. +...++.+.+...+..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~------~~a~~~L~~~~~el~~~ 88 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG------PAAVEKLDSLRNEIGFS 88 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTH------HHHHHHHHHTHHHHCCS
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHH------HHHHHHHHHHHHhcCcc
Confidence 4445555 36899999999999999999999755432 22 456666788864211 1112211222222211
Q ss_pred cC---CCceEEEEeeC---CCcchHHHHHHHHHHCCceEEEEE
Q 044728 333 RT---SEGISLELCCE---DRAGLLSDVTRIFRENGLSVTRAE 369 (450)
Q Consensus 333 r~---~~~t~iev~~~---DrpGLL~~It~~l~~~gi~I~~Ak 369 (450)
.. ..-.++.|.+. ++||+.+++.++|++.||||....
T Consensus 89 ~v~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 89 QLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp EEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred eEEEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 01 23467777776 899999999999999999999877
No 38
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.13 E-value=0.01 Score=54.37 Aligned_cols=121 Identities=14% Similarity=0.151 Sum_probs=77.3
Q ss_pred CCCCEE-EEeecCCCCeEEEEEE-cCCCcchHHHHHHHHHhCCceEEEEEEEe---cCCeEEEEEEEEeCCCCCCCchHH
Q 044728 21 MNPPRV-TVDNTSNRKATLIKVD-SANKRGSLLELVQVLNDLDLIIRRAYISS---DGEWFMDVFHVTDQNGNKLSEDDV 95 (450)
Q Consensus 21 ~~~p~V-~i~~~~~~~~~~V~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t---~~g~~~d~F~V~~~~g~~~~~~~~ 95 (450)
+.+|.| -|.. .++.+.|+|. .+|+||..+++.+.|++.|+||---.+.. .++..--+|.+...+
T Consensus 21 mE~~vVtGIa~--~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d--------- 89 (200)
T 4go7_X 21 MEDPILTGVAH--DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV--------- 89 (200)
T ss_dssp CCSCEEEEEEE--ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGG---------
T ss_pred cccCcEEEEEc--cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhh---------
Confidence 455655 3322 3456788886 59999999999999999999998655432 234555567764322
Q ss_pred HHHHHHHhCcCcc-CCCCcceeeeccCCCceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEE
Q 044728 96 SERIQQSLGPRAR-SFRSLRRSVGVQAALEHTTIELTG---RDRPGLLSEVFAVLSDLKCNVMGAE 157 (450)
Q Consensus 96 ~~~i~~~L~~~~~-~~~~~~r~v~~~~~~~~t~i~v~~---~DrpGLl~~i~~~L~~~glnI~~A~ 157 (450)
.+...+.|..... +. ...+ ..+.+...|.+++ +..||..+++..+|++.|+||.--.
T Consensus 90 ~~~~~~~l~~~~~~~~---~~~v--~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 90 GPAAVEKLDSLRNEIG---FSQL--LYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp HHHHHHHHHTTHHHHC---CSEE--EEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHHHhhhc---eeeE--EEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 1122222222110 00 0111 2344566777776 7899999999999999999998764
No 39
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.05 E-value=0.021 Score=51.79 Aligned_cols=66 Identities=12% Similarity=0.278 Sum_probs=50.4
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEE-eeC-CeEEEEEEEeecCCCCCCCCHHHHHHHHHHHHHhhh
Q 044728 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVW-THN-SRMASVVYITSEATGLPIDDPDTLAKIKRLLLYVLK 198 (450)
Q Consensus 125 ~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~-t~~-~~~~d~f~V~~~~~g~~i~~~~~~~~l~~~L~~~l~ 198 (450)
...|+|...|+||.|++|+++|+.+|+||.+..+. |.+ +...-++.|... +..+++|.+.|.++..
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--------e~~ieqL~kQL~KLid 96 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--------DKTIEQIEKQAYKLVE 96 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--------TTHHHHHHHHHTTSTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--------HHHHHHHHHHhcCcCc
Confidence 57899999999999999999999999999998886 444 445556666541 2356777777766543
No 40
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.01 E-value=0.022 Score=51.68 Aligned_cols=63 Identities=17% Similarity=0.317 Sum_probs=48.8
Q ss_pred ceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEe-ecC-ceeeeEEEEEeCCCCCCChHHHHHHHHHHhh
Q 044728 337 GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVT-TRG-SQAVNVFYVVDASGNPVKSETIESVRKEIGL 405 (450)
Q Consensus 337 ~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~-T~g-~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~~ 405 (450)
...|.|...|+||.|++|+.+|++.|+||.+..+. |.. +...-++.|... +..+++|.++|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcC
Confidence 36899999999999999999999999999998886 433 334445555433 3467888888887
No 41
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.84 E-value=0.027 Score=51.64 Aligned_cols=131 Identities=10% Similarity=0.092 Sum_probs=80.8
Q ss_pred CceEEEEEE-ecCCcChHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEecCCCCCCCcHHHHHHHHHHHH---HH
Q 044728 257 KGYTVVNLR-CPDRPKLLFDAVCTLTDMQYVVYHATVIAE---SPEAYQEYYIRHVDGNPISSEAERQRVINCLE---AA 329 (450)
Q Consensus 257 ~~~t~v~V~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~---~~ 329 (450)
.+.+.|+|. .+|+||+.+++...|++.|+||.---.... ++...-+|.+... ..++..+.|. ..
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~---------d~~~~~~~l~~~~~~ 103 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD---------VGPAAVEKLDSLRNE 103 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG---------GHHHHHHHHHTTHHH
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh---------hHHHHHHHHHHHHhh
Confidence 456677776 589999999999999999999986433221 3455566777632 2222223332 22
Q ss_pred Hhcc-C---CCceEEEEee---CCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHH
Q 044728 330 IKRR-T---SEGISLELCC---EDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKE 402 (450)
Q Consensus 330 L~~r-~---~~~t~iev~~---~DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~~~g~~l~~~~~~~L~~~ 402 (450)
+... . +.-..+.|.+ ..+||+.+++.++|++.||||.... |- ...=.|.|...+. +.-...|.++
T Consensus 104 ~~~~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs--tS--Ei~IS~vV~~~d~----~~Av~aLH~~ 175 (200)
T 4go7_X 104 IGFSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS--EIRISVLCRDTEL----DKAVVALHEA 175 (200)
T ss_dssp HCCSEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEGGGH----HHHHHHHHHH
T ss_pred hceeeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE--cc--CCEEEEEEeHHHH----HHHHHHHHHH
Confidence 2111 0 2234455544 5899999999999999999999875 31 2233455643321 1234566666
Q ss_pred Hh
Q 044728 403 IG 404 (450)
Q Consensus 403 l~ 404 (450)
|.
T Consensus 176 F~ 177 (200)
T 4go7_X 176 FG 177 (200)
T ss_dssp HT
T ss_pred hC
Confidence 54
No 42
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.80 E-value=0.17 Score=51.44 Aligned_cols=109 Identities=16% Similarity=0.143 Sum_probs=73.2
Q ss_pred CeEEEEEE-cCCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCC
Q 044728 35 KATLIKVD-SANKRGSLLELVQVLNDLDLIIRRAYISSD---GEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSF 110 (450)
Q Consensus 35 ~~~~V~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~ 110 (450)
+.+.|+|. .+|+||.++++.+.|++.|+||.--.+.|. +|...-+|.|...+ .++..+.+++...+.. .
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~-----~~~a~~~l~~~~~~~~-~- 335 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSD-----GRRAMEILKKLQVQGN-W- 335 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTT-----HHHHHHHHHHHHTTTT-C-
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechh-----HHHHHHHHHHHHHHcC-C-
Confidence 44667777 699999999999999999999986655443 45344457664321 1222333333222211 0
Q ss_pred CCcceeeeccCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 044728 111 RSLRRSVGVQAALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNVMGA 156 (450)
Q Consensus 111 ~~~~r~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI~~A 156 (450)
..+. ...+...+.|++. +.||.++++..+|++.|+||...
T Consensus 336 ----~~v~--~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 336 ----TNVL--YDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp ----SEEE--EECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred ----ceEE--EeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 1122 2456778888884 89999999999999999999843
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.61 E-value=0.073 Score=54.25 Aligned_cols=104 Identities=11% Similarity=0.105 Sum_probs=72.2
Q ss_pred CceEEEEEE-ecCCcChHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHH---H
Q 044728 257 KGYTVVNLR-CPDRPKLLFDAVCTLTDMQYVVYHATVIAE---SPEAYQEYYIRHVDGNPISSEAERQRVINCLEA---A 329 (450)
Q Consensus 257 ~~~t~v~V~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~---~ 329 (450)
.+.+.|+|. .+|+||.++++...|+++|+||..-...|. .|...-+|.|... ..++..+.|.+ .
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~---------~~~~a~~~l~~~~~~ 332 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS---------DGRRAMEILKKLQVQ 332 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT---------THHHHHHHHHHHHTT
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech---------hHHHHHHHHHHHHHH
Confidence 356788888 699999999999999999999987654443 3445556777631 11222233333 2
Q ss_pred Hhc-c---CCCceEEEEeeC---CCcchHHHHHHHHHHCCceEEEEE
Q 044728 330 IKR-R---TSEGISLELCCE---DRAGLLSDVTRIFRENGLSVTRAE 369 (450)
Q Consensus 330 L~~-r---~~~~t~iev~~~---DrpGLL~~It~~l~~~gi~I~~Ak 369 (450)
+.. . ...-.++.|.+. ++||+++++.++|++.||||....
T Consensus 333 ~~~~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is 379 (421)
T 3ab4_A 333 GNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 379 (421)
T ss_dssp TTCSEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEE
T ss_pred cCCceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 211 0 122356788876 899999999999999999999553
No 44
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.43 E-value=0.057 Score=47.45 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=44.6
Q ss_pred EEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEeecCCCCCCCCHHHHHHHHHHHHH
Q 044728 127 TIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITSEATGLPIDDPDTLAKIKRLLLY 195 (450)
Q Consensus 127 ~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~~~~g~~i~~~~~~~~l~~~L~~ 195 (450)
.|+|.+.||+|+|++|+.+|+.+++||..+.+.+. |. +++.-+ ..+.+.+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~-g~----i~~~~~-----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI-GR----IYLNFA-----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT-TE----EEEEEC-----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC-CE----EEEEEE-----eCCHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999765 32 334331 1134566777777654
No 45
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.25 E-value=0.028 Score=51.81 Aligned_cols=49 Identities=10% Similarity=0.209 Sum_probs=36.4
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeC-----CeEEEEEEEee
Q 044728 125 HTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN-----SRMASVVYITS 173 (450)
Q Consensus 125 ~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~-----~~~~d~f~V~~ 173 (450)
...|.|.+.||||+|++|+.+|+++++||...+..+.. +.+.-.+.+.+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d 57 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEG 57 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECS
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECC
Confidence 46789999999999999999999999999999998853 34555555544
No 46
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.03 E-value=0.038 Score=50.97 Aligned_cols=46 Identities=17% Similarity=0.054 Sum_probs=35.0
Q ss_pred eEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEec-----CCeEEEEEE
Q 044728 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSD-----GEWFMDVFH 81 (450)
Q Consensus 36 ~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~-----~g~~~d~F~ 81 (450)
...|.|.+.||||+|++|+.+|++.+.||...++.++ +|.+.-.+-
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IE 54 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFE 54 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEE
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEE
Confidence 3688999999999999999999999999999999874 566654333
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.18 E-value=0.34 Score=50.09 Aligned_cols=105 Identities=14% Similarity=0.233 Sum_probs=72.3
Q ss_pred CeEEEEEEc---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHh--------
Q 044728 35 KATLIKVDS---ANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSL-------- 103 (450)
Q Consensus 35 ~~~~V~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L-------- 103 (450)
+.+.|+|.+ +++||..+++..+|++.|+||.-..+.+.... -+|.|...+ .++..+.|++.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~~--Is~~V~~~d-----~~~a~~~L~~~l~~~~~~~~ 389 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSETN--ISLVVSEED-----VDKALKALKREFGDFGKKSF 389 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTCC--EEEEEEGGG-----HHHHHHHHHHHHCC----CT
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCCE--EEEEEechH-----HHHHHHHHHHHHhhhccccc
Confidence 456778874 78899999999999999999986665443221 236664422 144566677666
Q ss_pred CcCccCCCCcceeeeccCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceE
Q 044728 104 GPRARSFRSLRRSVGVQAALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNV 153 (450)
Q Consensus 104 ~~~~~~~~~~~r~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI 153 (450)
..... -..+ ....+...+.|++. ++||.++++..+|++.|+||
T Consensus 390 ~~~~~-----~~~v--~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI 435 (473)
T 3c1m_A 390 LNNNL-----IRDV--SVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANI 435 (473)
T ss_dssp TSCCC-----EEEE--EEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCC
T ss_pred ccccc-----cceE--EEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCE
Confidence 21100 0011 22456777888885 68999999999999999999
No 48
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=92.85 E-value=0.25 Score=47.55 Aligned_cols=67 Identities=15% Similarity=0.219 Sum_probs=48.7
Q ss_pred ceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecC-ceeeeEEEEEeCCCCCCChHHHHHHHHHHhh
Q 044728 337 GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRG-SQAVNVFYVVDASGNPVKSETIESVRKEIGL 405 (450)
Q Consensus 337 ~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g-~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~~ 405 (450)
.|.|-+...|+||-|+++-..|+.+|||+.+....-.. ..-+-.|||. -+|..-+ ...++.-++|..
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD-~eg~~~d-~~v~~aL~~L~~ 267 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYAD-FIGHRED-QNVHNALENLRE 267 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEE-EESCTTS-HHHHHHHHHHHT
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEE-EecCCCc-HHHHHHHHHHHH
Confidence 45666666799999999999999999999999987655 4478899994 4465533 333444444443
No 49
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=92.63 E-value=0.88 Score=46.94 Aligned_cols=116 Identities=10% Similarity=0.130 Sum_probs=75.7
Q ss_pred CceEEEEEEe---cCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHH---
Q 044728 257 KGYTVVNLRC---PDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAI--- 330 (450)
Q Consensus 257 ~~~t~v~V~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L--- 330 (450)
.+.+.|.|.+ +++||+.+++..+|+++|+||..-...+.. .--+|.|... ..++..+.|.+.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~~---------d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSEE---------DVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEGG---------GHHHHHHHHHHHHCC-
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEech---------HHHHHHHHHHHHHhhh
Confidence 3667889986 678899999999999999999876553332 2234666632 1234444454444
Q ss_pred -----hcc--C------CCceEEEEeeC---CCcchHHHHHHHHHHCCceEEEEEEeecCceee-eEEEEEeC
Q 044728 331 -----KRR--T------SEGISLELCCE---DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAV-NVFYVVDA 386 (450)
Q Consensus 331 -----~~r--~------~~~t~iev~~~---DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~-D~F~v~~~ 386 (450)
... . ..-.++.|.+. ++||+++++.++|++.||||... ++|.... -.|.|...
T Consensus 385 ~~~~~~~~~~~~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi---sqgtSe~~Is~vV~~~ 454 (473)
T 3c1m_A 385 GKKSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI---AQGSSEVNISFVIDEK 454 (473)
T ss_dssp ---CTTSCCCEEEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE---EESSCSSEEEEEEEGG
T ss_pred cccccccccccceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE---ecCCCCceEEEEEcHH
Confidence 221 0 12245778876 59999999999999999999443 3443322 34555433
No 50
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=91.76 E-value=0.39 Score=46.88 Aligned_cols=90 Identities=14% Similarity=0.230 Sum_probs=60.7
Q ss_pred hCC-ceEEEEEEEecC-CeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhccCCCceEEEEeeC-CCcchHHHHHHHH
Q 044728 282 DMQ-YVVYHATVIAES-PEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCCE-DRAGLLSDVTRIF 358 (450)
Q Consensus 282 ~~g-lnI~~A~I~t~~-g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~r~~~~t~iev~~~-DrpGLL~~It~~l 358 (450)
..| ++|+.-.|.... ++. .|+|.......... .....|.|-+..+ |+||-|+++-..|
T Consensus 163 ~Yg~L~il~~~I~D~~~N~T--RFlvl~~~~~~~~~-----------------~~~~kTSl~f~~~~~~pGaL~~~L~~F 223 (313)
T 3mwb_A 163 EQPGLNVLAEDIGDNPDAVT--RFILVSRPGALPER-----------------TGADKTTVVVPLPEDHPGALMEILDQF 223 (313)
T ss_dssp HCTTCEEEESCCCSCTTCEE--EEEEEECSCCCCCC-----------------CSSEEEEEEEECSSCCTTHHHHHHHHH
T ss_pred HcCChhhhhhcccCCCccee--EEEEEecCCCCCCC-----------------CCCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 467 888887776643 333 36666433221100 0112467777775 9999999999999
Q ss_pred HHCCceEEEEEEeecC-ceeeeEEEEEeCCCCCC
Q 044728 359 RENGLSVTRAEVTTRG-SQAVNVFYVVDASGNPV 391 (450)
Q Consensus 359 ~~~gi~I~~AkI~T~g-~~a~D~F~v~~~~g~~l 391 (450)
+.+|||+.+....-.. ..-+-.|||. -+|..-
T Consensus 224 a~~gINLtkIESRP~~~~~~~Y~FfiD-~eg~~~ 256 (313)
T 3mwb_A 224 ASRGVNLSRIESRPTGQYLGHYFFSID-ADGHAT 256 (313)
T ss_dssp HTTTCCEEEEEEEECSSSTTSEEEEEE-EESCTT
T ss_pred HHCCccEEEEEEeecCCCCccEEEEEE-EeCCCC
Confidence 9999999999887554 4477899994 446553
No 51
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.02 E-value=0.39 Score=48.61 Aligned_cols=48 Identities=23% Similarity=0.364 Sum_probs=42.6
Q ss_pred eEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEe
Q 044728 338 ISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVD 385 (450)
Q Consensus 338 t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~ 385 (450)
..|-+.-.|+||.+..|+.+|+++||||......+.|+.+.-++.+..
T Consensus 332 ~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~ 379 (404)
T 1sc6_A 332 RRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEA 379 (404)
T ss_dssp EEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEEC
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCC
Confidence 567788899999999999999999999999999998888887777743
No 52
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=91.00 E-value=0.88 Score=44.67 Aligned_cols=46 Identities=22% Similarity=0.374 Sum_probs=38.0
Q ss_pred CCcchHHHHHHHHHHCCceEEEEEEeecC-ceeeeEEEEEeCCCCCCC
Q 044728 346 DRAGLLSDVTRIFRENGLSVTRAEVTTRG-SQAVNVFYVVDASGNPVK 392 (450)
Q Consensus 346 DrpGLL~~It~~l~~~gi~I~~AkI~T~g-~~a~D~F~v~~~~g~~l~ 392 (450)
|+||-|+++-..|+.+|||+.+....... ..-+-.|||. -+|..-+
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD-~eg~~~d 263 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVT-LDAAPWE 263 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEE-ESSCTTS
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEE-EeCCcCC
Confidence 89999999999999999999999987554 4578899984 4566543
No 53
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=90.65 E-value=0.95 Score=43.11 Aligned_cols=97 Identities=13% Similarity=0.190 Sum_probs=64.6
Q ss_pred hCCceEEEEEEEecC-CeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhccCCCceEEEEee---CCCcchHHHHHHH
Q 044728 282 DMQYVVYHATVIAES-PEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRTSEGISLELCC---EDRAGLLSDVTRI 357 (450)
Q Consensus 282 ~~glnI~~A~I~t~~-g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~r~~~~t~iev~~---~DrpGLL~~It~~ 357 (450)
..|++|+.-.|.... ++. .|+|..... +.. ...|.|-+.. .|+||-|+++-..
T Consensus 153 ~ygL~il~~~I~D~~~N~T--RF~vl~~~~-~~~--------------------~~ktsl~f~~~~~~~~pGaL~~~L~~ 209 (267)
T 2qmw_A 153 AYGFTPIDTHIEDYPHNVT--RFLVIKNQQ-QFD--------------------QNATSLMFLITPMHDKPGLLASVLNT 209 (267)
T ss_dssp GGTCCEEEECCCSCSCCEE--EEEEEESCC-CCC--------------------SSCSEEEEEEEESSCCTTHHHHHHHH
T ss_pred HCCCcEeeccccCCCCCce--EEEEEecCC-CCC--------------------CCeEEEEEEcCCCCCCcChHHHHHHH
Confidence 348888888776653 333 366664322 110 1245666677 8999999999999
Q ss_pred HHHCCceEEEEEEeecC-ceeeeEEEEEeCCCCCCChHHHHHHHHHHh
Q 044728 358 FRENGLSVTRAEVTTRG-SQAVNVFYVVDASGNPVKSETIESVRKEIG 404 (450)
Q Consensus 358 l~~~gi~I~~AkI~T~g-~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~ 404 (450)
|+.+|||+.+....... ..-+-.|||.-. . ..+...++.-++|.
T Consensus 210 Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e--~-~~d~~v~~aL~~L~ 254 (267)
T 2qmw_A 210 FALFNINLSWIESRPLKTQLGMYRFFVQAD--S-AITTDIKKVIAILE 254 (267)
T ss_dssp HHTTTCCEEEEEEEECSSSTTCEEEEEEES--C-CSCHHHHHHHHHHH
T ss_pred HHHcCCCeeEEEEeecCCCCccEEEEEEEe--c-CCcHHHHHHHHHHH
Confidence 99999999999987654 447889999655 3 23344444444443
No 54
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=90.45 E-value=1 Score=47.14 Aligned_cols=62 Identities=19% Similarity=0.398 Sum_probs=47.9
Q ss_pred CceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeec--CceeeeEEEEEeCCCCCCChHHHHHHHH
Q 044728 336 EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTR--GSQAVNVFYVVDASGNPVKSETIESVRK 401 (450)
Q Consensus 336 ~~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~--g~~a~D~F~v~~~~g~~l~~~~~~~L~~ 401 (450)
..+.+-+.-.|+||.+..|+..|.++||||...++.-. |+.+.-++.+ ..+++++.+++|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v----d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL----DQDVPDDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE----SSCCCHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE----CCCCCHHHHHHHhc
Confidence 45788899999999999999999999999999999754 5556656655 23455555666654
No 55
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=90.40 E-value=0.78 Score=48.01 Aligned_cols=64 Identities=16% Similarity=0.228 Sum_probs=49.6
Q ss_pred CCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEee--CCeEEEEEEEeecCCCCCCCCHHHHHHHH
Q 044728 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTH--NSRMASVVYITSEATGLPIDDPDTLAKIK 190 (450)
Q Consensus 121 ~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~--~~~~~d~f~V~~~~~g~~i~~~~~~~~l~ 190 (450)
..+....+.+.-.|+||.+..|+..|.++|+||.+.++... ++.+.-++.+.+ ++ +++.+++|+
T Consensus 450 ~~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~-----~~-~~~~l~~l~ 515 (529)
T 1ygy_A 450 LRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ-----DV-PDDVRTAIA 515 (529)
T ss_dssp EESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS-----CC-CHHHHHHHH
T ss_pred ecCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC-----CC-CHHHHHHHh
Confidence 45567888999999999999999999999999999999874 555666666654 24 344555554
No 56
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=88.91 E-value=0.9 Score=46.53 Aligned_cols=120 Identities=15% Similarity=0.234 Sum_probs=73.8
Q ss_pred eEEEEEEc---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCCCC
Q 044728 36 ATLIKVDS---ANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFRS 112 (450)
Q Consensus 36 ~~~V~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~~~ 112 (450)
.+.|+|.. ++.||..+++..+|++.|++|.-. .+.... -+|.|...+-.+ ...++.++++..+...
T Consensus 298 ~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~~~~~--is~~V~~~d~~~-~~~~~~~el~~~~~~~------ 366 (446)
T 3tvi_A 298 FTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PSGVDS--VSLVIEDCKLDG-KCDKIIEEIKKQCNPD------ 366 (446)
T ss_dssp EEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CEETTE--EEEEEEHHHHTT-THHHHHHHHHHHSCCS------
T ss_pred EEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ecCCCE--EEEEEecchHHH-HHHHHHHHHHHhcCCC------
Confidence 45677764 699999999999999999999743 221111 236664432111 0122334444333211
Q ss_pred cceeeeccCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEee
Q 044728 113 LRRSVGVQAALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173 (450)
Q Consensus 113 ~~r~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~ 173 (450)
.+. ...+...|.|+|. ..||..+++..+|++.|+||....--|. ...-.|.|..
T Consensus 367 ---~v~--v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtS--ei~Is~vV~~ 423 (446)
T 3tvi_A 367 ---SIE--IHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSS--EINVIVGVET 423 (446)
T ss_dssp ---EEE--EEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSC--TTEEEEEEEG
T ss_pred ---cEE--EeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCC--CceEEEEEcH
Confidence 111 2456788899875 6899999999999999999986543222 2333455544
No 57
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=87.65 E-value=2.2 Score=43.60 Aligned_cols=117 Identities=9% Similarity=0.093 Sum_probs=74.0
Q ss_pred ceEEEEEEe---cCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc-c
Q 044728 258 GYTVVNLRC---PDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR-R 333 (450)
Q Consensus 258 ~~t~v~V~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~-r 333 (450)
+.+.|+|.+ ++.||..+++...|+++|++|..- .+.. .--+|.|...+-.. ...++.+.|...+.. .
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~~~--~~is~~V~~~d~~~-----~~~~~~~el~~~~~~~~ 367 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PSGV--DSVSLVIEDCKLDG-----KCDKIIEEIKKQCNPDS 367 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CEET--TEEEEEEEHHHHTT-----THHHHHHHHHHHSCCSE
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ecCC--CEEEEEEecchHHH-----HHHHHHHHHHHhcCCCc
Confidence 567788885 699999999999999999999753 2211 12346665321100 123333444433211 0
Q ss_pred C---CCceEEEEeeC---CCcchHHHHHHHHHHCCceEEEEEEeecCce-eeeEEEEEeC
Q 044728 334 T---SEGISLELCCE---DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQ-AVNVFYVVDA 386 (450)
Q Consensus 334 ~---~~~t~iev~~~---DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~-a~D~F~v~~~ 386 (450)
. ..-.+|.|.+. .+||+.+++.++|++.||||.... +|.. ..=.|.|...
T Consensus 368 v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs---qgtSei~Is~vV~~~ 424 (446)
T 3tvi_A 368 IEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID---QGSSEINVIVGVETV 424 (446)
T ss_dssp EEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE---ECSCTTEEEEEEEGG
T ss_pred EEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE---ecCCCceEEEEEcHH
Confidence 0 12357888876 589999999999999999998764 3332 2234556433
No 58
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.33 E-value=1.6 Score=44.08 Aligned_cols=48 Identities=10% Similarity=0.007 Sum_probs=42.2
Q ss_pred eEEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEe
Q 044728 259 YTVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIR 306 (450)
Q Consensus 259 ~t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~ 306 (450)
...+.+.-.|+||.+.+++.+|+++|+||...+..+.++.++-++.|.
T Consensus 331 ~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD 378 (404)
T 1sc6_A 331 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIE 378 (404)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEE
T ss_pred cceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcC
Confidence 446888899999999999999999999999999999888887666665
No 59
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.87 E-value=1.1 Score=45.56 Aligned_cols=62 Identities=23% Similarity=0.306 Sum_probs=47.9
Q ss_pred cCCCCEEEEeecCCCCeEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCC
Q 044728 20 RMNPPRVTVDNTSNRKATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQN 86 (450)
Q Consensus 20 ~~~~p~V~i~~~~~~~~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~ 86 (450)
.++.|.|.... ..+...|.+.-+|.||.+..|..+|.+.|+||.+-.-.|.+++++ .+.|-+
T Consensus 329 ~Vn~p~~~~~~--~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y---~~~d~~ 390 (416)
T 3k5p_A 329 AVNFPQVQLPP--RPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGY---LVMEAD 390 (416)
T ss_dssp BSSSCCCCCCC--CSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEE---EEEEEC
T ss_pred eeeCCCcCCCC--CCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEE---EEEEec
Confidence 44556665432 235689999999999999999999999999999777778777773 445544
No 60
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.89 E-value=3.4 Score=41.77 Aligned_cols=52 Identities=19% Similarity=0.187 Sum_probs=43.4
Q ss_pred CCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEe
Q 044728 121 AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYIT 172 (450)
Q Consensus 121 ~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~ 172 (450)
...+...|.+.-.|.||.|..|..+|+++|+||..-...|.++.+--+.-|.
T Consensus 339 ~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 339 PRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEAD 390 (416)
T ss_dssp CCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEec
Confidence 3456789999999999999999999999999999999988776654444443
No 61
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=85.29 E-value=1.7 Score=44.48 Aligned_cols=50 Identities=26% Similarity=0.475 Sum_probs=35.6
Q ss_pred ceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeec--CceeeeEEEEEeC
Q 044728 337 GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTR--GSQAVNVFYVVDA 386 (450)
Q Consensus 337 ~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~--g~~a~D~F~v~~~ 386 (450)
.|.+.+...|+||.|++|+.+|.++||+|++..=.-. ++....+..+|..
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~ 410 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHV 410 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECS
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEecc
Confidence 4789999999999999999999999999998753321 1112345556554
No 62
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=85.23 E-value=3.6 Score=42.83 Aligned_cols=137 Identities=14% Similarity=0.150 Sum_probs=83.9
Q ss_pred CeEEEEEEc---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCC-chHHHHHHHHHhCcCccCC
Q 044728 35 KATLIKVDS---ANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLS-EDDVSERIQQSLGPRARSF 110 (450)
Q Consensus 35 ~~~~V~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~-~~~~~~~i~~~L~~~~~~~ 110 (450)
+.+.|+|.. +++||..+++..+|++.|++|.--. +..... +|.|...+..+.. ..+.++++.+.|....
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~-sse~si---s~~v~~~~~~~~~~~~~~l~~~~~el~~~~--- 412 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA-TSEVSI---SLTLDPSKLWSRELIQQELDHVVEELEKIA--- 412 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE-EETTEE---EEEECCGGGSSSCCCHHHHHHHHHHHTTTS---
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE-eCCCeE---EEEEechHhhhhhHHHHHHHHHHHHhCCCC---
Confidence 446777774 7899999999999999999998552 222222 3555332211110 1234455555554311
Q ss_pred CCcceeeeccCCCceEEEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEEeeCC-eEEEEEEEeecCCCCCCCCHHHHH
Q 044728 111 RSLRRSVGVQAALEHTTIELTGR--DRPGLLSEVFAVLSDLKCNVMGAEVWTHNS-RMASVVYITSEATGLPIDDPDTLA 187 (450)
Q Consensus 111 ~~~~r~v~~~~~~~~t~i~v~~~--DrpGLl~~i~~~L~~~glnI~~A~i~t~~~-~~~d~f~V~~~~~g~~i~~~~~~~ 187 (450)
.+. -..+...|.|++. ..||..+++..+|++.|+||.... .|. ...-.|.|.. +..+
T Consensus 413 -----~v~--~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qGsSei~Is~vV~~----------~d~~ 472 (510)
T 2cdq_A 413 -----VVN--LLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QGASKVNISFIVNE----------AEAE 472 (510)
T ss_dssp -----EEE--EEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---ECTTCSEEEEEEEH----------HHHH
T ss_pred -----eEE--EeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ecCCcceEEEEEeH----------HHHH
Confidence 121 2445777888886 778999999999999999997653 222 2334455554 2334
Q ss_pred HHHHHHHHhhh
Q 044728 188 KIKRLLLYVLK 198 (450)
Q Consensus 188 ~l~~~L~~~l~ 198 (450)
+--+.|++.+-
T Consensus 473 ~Av~aLH~~f~ 483 (510)
T 2cdq_A 473 GCVQALHKSFF 483 (510)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 44455666554
No 63
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=83.23 E-value=0.84 Score=39.58 Aligned_cols=113 Identities=13% Similarity=0.102 Sum_probs=67.8
Q ss_pred CeEEEEEE---cCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCCC
Q 044728 35 KATLIKVD---SANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFR 111 (450)
Q Consensus 35 ~~~~V~V~---~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~~ 111 (450)
+.+.|+|. .+++||..+++..+|++.|+||.--. +.... -+|.|.+.+ ..+++.+.|....
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~~--Isf~v~~~~--------~~~~il~~l~~~~---- 80 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEVG--VSLTIDNDK--------NLPDIVRALSDIG---- 80 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSSE--EEEEESCCT--------THHHHHHHHTTTE----
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCCE--EEEEECChH--------HHHHHHHHHhccC----
Confidence 45778877 37899999999999999999996332 22221 236653221 1223333333211
Q ss_pred CcceeeeccCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEee
Q 044728 112 SLRRSVGVQAALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173 (450)
Q Consensus 112 ~~~r~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~ 173 (450)
.+. ...+...|.++|. ++||..+++..+|+ |+||....-.+. ...-.|.|..
T Consensus 81 ----~v~--~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~S--e~~is~vv~~ 135 (157)
T 3mah_A 81 ----DVT--VDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGS--NYNVSVLVKA 135 (157)
T ss_dssp ----EEE--EEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSS--SSCEEEEEEG
T ss_pred ----eEE--EeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCC--CCEEEEEEcH
Confidence 122 2345678888874 78999999999999 999876432221 2334455554
No 64
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=79.08 E-value=4.9 Score=38.48 Aligned_cols=53 Identities=15% Similarity=0.183 Sum_probs=42.7
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeCCe-EEEEEEEeecCCCC
Q 044728 124 EHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSR-MASVVYITSEATGL 178 (450)
Q Consensus 124 ~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~-~~d~f~V~~~~~g~ 178 (450)
+.|.|.+..+|+||.|+++-+.|+.+|+|+..-......+. ..=.|+|.- .|+
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~ 252 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGH 252 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESC
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecC
Confidence 45777777889999999999999999999998888765444 566788765 355
No 65
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=77.81 E-value=14 Score=35.96 Aligned_cols=52 Identities=15% Similarity=0.148 Sum_probs=39.4
Q ss_pred eEEEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEEeeCCeE-EEEEEEeecCCCC
Q 044728 125 HTTIELTGR--DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRM-ASVVYITSEATGL 178 (450)
Q Consensus 125 ~t~i~v~~~--DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~-~d~f~V~~~~~g~ 178 (450)
.+.+.+..+ |+||.|+++-+.|+.+|+|+.........+.. .=.|+|.- .|+
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~ 260 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAA 260 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSC
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCC
Confidence 345555554 79999999999999999999988887766554 44777765 465
No 66
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=76.34 E-value=6.2 Score=38.32 Aligned_cols=51 Identities=20% Similarity=0.212 Sum_probs=40.7
Q ss_pred CceEEEEEEeC-CCcchHHHHHHHHHhCCceEEEEEEEeeCCe-EEEEEEEee
Q 044728 123 LEHTTIELTGR-DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSR-MASVVYITS 173 (450)
Q Consensus 123 ~~~t~i~v~~~-DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~-~~d~f~V~~ 173 (450)
.+.|.|.+..+ |+||.|+++-+.|+.+|+|+...+.....+. ..=.|+|.-
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 251 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA 251 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE
Confidence 35678888886 9999999999999999999998887765433 455777765
No 67
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=76.13 E-value=4.8 Score=41.84 Aligned_cols=120 Identities=14% Similarity=0.149 Sum_probs=73.9
Q ss_pred ceEEEEEEe---cCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCC-cHHHHHHHHHHHHHHHhcc
Q 044728 258 GYTVVNLRC---PDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPIS-SEAERQRVINCLEAAIKRR 333 (450)
Q Consensus 258 ~~t~v~V~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~-~~~~~~~l~~~L~~~L~~r 333 (450)
+.+.|.|.+ .++||..+++..+|+++|++|..-. |. ..--+|.|...+..... ..+..+++.+.|.. + ..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--ss--e~sis~~v~~~~~~~~~~~~~~l~~~~~el~~-~-~~ 413 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TS--EVSISLTLDPSKLWSRELIQQELDHVVEELEK-I-AV 413 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EE--TTEEEEEECCGGGSSSCCCHHHHHHHHHHHTT-T-SE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eC--CCeEEEEEechHhhhhhHHHHHHHHHHHHhCC-C-Ce
Confidence 567888985 7899999999999999999998762 22 12223666532211110 11122232222221 0 01
Q ss_pred C---CCceEEEEeeC--CCcchHHHHHHHHHHCCceEEEEEEeecCce-eeeEEEEEeC
Q 044728 334 T---SEGISLELCCE--DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQ-AVNVFYVVDA 386 (450)
Q Consensus 334 ~---~~~t~iev~~~--DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~-a~D~F~v~~~ 386 (450)
. ..-.+|.|.+. ..||+.+++..+|++.||||.... +|.. ..=.|.|...
T Consensus 414 v~~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qGsSei~Is~vV~~~ 469 (510)
T 2cdq_A 414 VNLLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QGASKVNISFIVNEA 469 (510)
T ss_dssp EEEEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---ECTTCSEEEEEEEHH
T ss_pred EEEeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ecCCcceEEEEEeHH
Confidence 0 12356777777 788999999999999999998753 4433 3335666433
No 68
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=71.22 E-value=12 Score=35.48 Aligned_cols=51 Identities=18% Similarity=0.267 Sum_probs=40.9
Q ss_pred CceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEeeCCe-EEEEEEEee
Q 044728 123 LEHTTIELTG---RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSR-MASVVYITS 173 (450)
Q Consensus 123 ~~~t~i~v~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~-~~d~f~V~~ 173 (450)
.+.|.|.+.. +|+||.|+++-+.|+.+|+|+..-......+. ..=.|+|.-
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 3566777777 89999999999999999999998888765443 556788766
No 69
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=69.52 E-value=4.2 Score=41.49 Aligned_cols=40 Identities=23% Similarity=0.325 Sum_probs=33.0
Q ss_pred cCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEE
Q 044728 120 QAALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVW 159 (450)
Q Consensus 120 ~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~ 159 (450)
+.-...+-+.+...|+||.|+.|+++|.++|++|.+..-.
T Consensus 354 ~~~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~ 393 (444)
T 3mtj_A 354 EAVRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQK 393 (444)
T ss_dssp GGCEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHcceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeec
Confidence 3445678888999999999999999999999999886543
No 70
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=69.52 E-value=3 Score=35.94 Aligned_cols=110 Identities=14% Similarity=0.126 Sum_probs=65.7
Q ss_pred ceEEEEEEe---cCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhccC
Q 044728 258 GYTVVNLRC---PDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKRRT 334 (450)
Q Consensus 258 ~~t~v~V~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~r~ 334 (450)
+.+.|+|.+ +++||..+++..+|+++|+||..-. + ... --+|.|.+.+ ..+++.+.|.+ . ...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~-s~~-~Isf~v~~~~--------~~~~il~~l~~-~-~~v 82 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--T-SEV-GVSLTIDNDK--------NLPDIVRALSD-I-GDV 82 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--C-CSS-EEEEEESCCT--------THHHHHHHHTT-T-EEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--e-cCC-EEEEEECChH--------HHHHHHHHHhc-c-CeE
Confidence 456777774 5789999999999999999986432 2 221 2346665321 12233233321 0 111
Q ss_pred ---CCceEEEEeeC---CCcchHHHHHHHHHHCCceEEEEEEeecCce-eeeEEEEEeC
Q 044728 335 ---SEGISLELCCE---DRAGLLSDVTRIFRENGLSVTRAEVTTRGSQ-AVNVFYVVDA 386 (450)
Q Consensus 335 ---~~~t~iev~~~---DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~-a~D~F~v~~~ 386 (450)
..-.++.|.+. ++||+.+++.++|+ |+||.... +|.. ..-.|.|...
T Consensus 83 ~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is---qg~Se~~is~vv~~~ 136 (157)
T 3mah_A 83 TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS---YGGSNYNVSVLVKAE 136 (157)
T ss_dssp EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE---ECSSSSCEEEEEEGG
T ss_pred EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe---eCCCCCEEEEEEcHH
Confidence 12356777765 68999999999999 99988754 3422 2345666444
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=69.43 E-value=4.7 Score=40.79 Aligned_cols=66 Identities=23% Similarity=0.332 Sum_probs=48.2
Q ss_pred ceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecC-ceeeeEEEEEeCCCCCCChHHHHHHHHHHhh
Q 044728 337 GISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRG-SQAVNVFYVVDASGNPVKSETIESVRKEIGL 405 (450)
Q Consensus 337 ~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g-~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~~ 405 (450)
.|.|-+...|+||-|+++-..|+.+|||+......-.. ...+-.|||.-. ...+...+++-++|..
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e---h~~d~~v~~AL~eL~~ 100 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD---KRTKPVLGSIIKSLRN 100 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC---GGGHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe---eCCCHHHHHHHHHHHh
Confidence 46677777899999999999999999999998877554 457889999444 2233344444455544
No 72
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=60.65 E-value=42 Score=29.12 Aligned_cols=87 Identities=8% Similarity=0.101 Sum_probs=56.4
Q ss_pred hHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHHHhc----cCCCceEEEEeeC--
Q 044728 272 LLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAAIKR----RTSEGISLELCCE-- 345 (450)
Q Consensus 272 Ll~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~L~~----r~~~~t~iev~~~-- 345 (450)
+..-+..++.. |+.+.+.++...++...-..+|..+.|-.+ +.++.+-+.|...|.+ ..+..|.|||+++
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~~gi~l---ddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGl 89 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEGITL---NDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGL 89 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECSSCCCH---HHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSS
T ss_pred HHHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECCCCCCH---HHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCC
Confidence 34445566667 999999999887654443445554444333 4788999999888873 2357899999987
Q ss_pred CCcchHHHHHHHHHHCCce
Q 044728 346 DRAGLLSDVTRIFRENGLS 364 (450)
Q Consensus 346 DrpGLL~~It~~l~~~gi~ 364 (450)
||| |..--.+-.-.|-.
T Consensus 90 dRp--L~~~~df~r~~G~~ 106 (164)
T 1ib8_A 90 ERP--LKTKDAVAGAVGKY 106 (164)
T ss_dssp SSC--CSSHHHHHHHCSEE
T ss_pred CCC--CCCHHHHHHhCCcE
Confidence 666 33333444444533
No 73
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=53.88 E-value=61 Score=33.50 Aligned_cols=130 Identities=17% Similarity=0.164 Sum_probs=79.5
Q ss_pred eEEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEecC-CeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCcc----CC
Q 044728 36 ATLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDG-EWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRAR----SF 110 (450)
Q Consensus 36 ~~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~-g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~----~~ 110 (450)
...+.|..|||||-|.+++.+|. +-||.+-.-...+ +.+ ..++...-.+. .+-.+.|.+.|..... +.
T Consensus 338 ~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~-~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~ 410 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNA-CIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLS 410 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBC-EEEEEEECSST----HHHHHHHHHHHTSSSCEEETTS
T ss_pred cccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeE-EEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECC
Confidence 35678889999999999999988 6888876543322 222 23443333321 3467788888876642 11
Q ss_pred CC-----cce-eeec-c-CCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeC---CeEEEEEEEee
Q 044728 111 RS-----LRR-SVGV-Q-AALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN---SRMASVVYITS 173 (450)
Q Consensus 111 ~~-----~~r-~v~~-~-~~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~---~~~~d~f~V~~ 173 (450)
.. +-| -|.- . .-.+...+.+.-|.|||-|.+.-..|.. +.||.--+--.+| |++.--|.|.+
T Consensus 411 ~~~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~~~~~~~ 483 (514)
T 1tdj_A 411 DDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLAAFELGD 483 (514)
T ss_dssp SCHHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEEEEC---
T ss_pred CCHHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEEEEEcCC
Confidence 10 000 0111 1 1234566888899999999999998875 5676655544443 56777777665
No 74
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=48.04 E-value=24 Score=35.58 Aligned_cols=52 Identities=10% Similarity=0.132 Sum_probs=41.4
Q ss_pred CCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEeeC-CeEEEEEEEee
Q 044728 122 ALEHTTIELTGRDRPGLLSEVFAVLSDLKCNVMGAEVWTHN-SRMASVVYITS 173 (450)
Q Consensus 122 ~~~~t~i~v~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~-~~~~d~f~V~~ 173 (450)
....|.|.+..+|+||-|+++-+.|+.+|+|+......... ....=.|+|.-
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 44678888888999999999999999999999877776543 33556777755
No 75
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=39.41 E-value=97 Score=24.54 Aligned_cols=49 Identities=14% Similarity=0.016 Sum_probs=36.1
Q ss_pred CeEEEEEEcCCCcchHHHHHHHHHhCCce-EEEEEEEecCCeEEEEEEEEeCCCCCC
Q 044728 35 KATLIKVDSANKRGSLLELVQVLNDLDLI-IRRAYISSDGEWFMDVFHVTDQNGNKL 90 (450)
Q Consensus 35 ~~~~V~V~~~DrpGLl~~i~~~L~~~gln-I~~A~i~t~~g~~~d~F~V~~~~g~~~ 90 (450)
+.+.+.+.+.| +..+...|.+.|.. |...-.....|.. |++.|++|+.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45678888888 78888999999999 7754433445544 77899999854
No 76
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=35.06 E-value=95 Score=24.62 Aligned_cols=49 Identities=14% Similarity=0.094 Sum_probs=35.6
Q ss_pred ceEEEEEEecCCcChHHHHHHHHHhCCce-EEEEEEEecCCeEEEEEEEecCCCCCC
Q 044728 258 GYTVVNLRCPDRPKLLFDAVCTLTDMQYV-VYHATVIAESPEAYQEYYIRHVDGNPI 313 (450)
Q Consensus 258 ~~t~v~V~~~DrpGLl~~i~~~L~~~gln-I~~A~I~t~~g~~~d~F~V~~~~g~~~ 313 (450)
++..+.+.+.| +......|.++|+. +...-.....|.. |++.|++|..+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45667788888 78888999999999 7654333334443 89999999854
No 77
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=30.64 E-value=1.4e+02 Score=30.74 Aligned_cols=117 Identities=10% Similarity=0.119 Sum_probs=76.2
Q ss_pred EEEEEEecCCcChHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEecCCCCCCCcHHHHHHHHHHHHHH------H---
Q 044728 260 TVVNLRCPDRPKLLFDAVCTLTDMQYVVYHATVIAESPEAYQEYYIRHVDGNPISSEAERQRVINCLEAA------I--- 330 (450)
Q Consensus 260 t~v~V~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~------L--- 330 (450)
..+.|.-+||||-|.+++..|. +-||.+-.=...+.....+++.....+. .+..+.|.++|.+. |
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 412 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSDD 412 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSSC
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCCC
Confidence 4577889999999999999887 6888876544322222233333332221 24667777777532 0
Q ss_pred -----------hccCC---CceEEEEeeCCCcchHHHHHHHHHHCCceEEEEEEeecCce---eeeEEEE
Q 044728 331 -----------KRRTS---EGISLELCCEDRAGLLSDVTRIFRENGLSVTRAEVTTRGSQ---AVNVFYV 383 (450)
Q Consensus 331 -----------~~r~~---~~t~iev~~~DrpGLL~~It~~l~~~gi~I~~AkI~T~g~~---a~D~F~v 383 (450)
.+|.+ +.-+....=+.|||-|.++-..|.. +-||.-.+-..+|.. +.--|.+
T Consensus 413 ~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~~~~~ 481 (514)
T 1tdj_A 413 EMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLAAFEL 481 (514)
T ss_dssp HHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEEEEC-
T ss_pred HHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEEEEEc
Confidence 01222 3456888899999999999999875 678888888888854 4444444
No 78
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=27.64 E-value=64 Score=26.99 Aligned_cols=47 Identities=13% Similarity=0.101 Sum_probs=33.2
Q ss_pred CCceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEee
Q 044728 122 ALEHTTIELTG---RDRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173 (450)
Q Consensus 122 ~~~~t~i~v~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~ 173 (450)
+..+..|++.+ .|-.|+++.|++.|++.|++|.-.. | .-.|-..|..
T Consensus 68 ~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iS--t---y~tDhIlVp~ 117 (133)
T 1zvp_A 68 SALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVIA--G---YYHDHIFVQK 117 (133)
T ss_dssp CSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEE--C---SSCEEEEEEG
T ss_pred CCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEE--e---ccccEEEEeh
Confidence 34566666665 6899999999999999999997544 3 2245455544
No 79
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=27.60 E-value=31 Score=29.00 Aligned_cols=47 Identities=17% Similarity=0.216 Sum_probs=33.6
Q ss_pred CCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEEeeCCeEEEEEEEee
Q 044728 122 ALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSRMASVVYITS 173 (450)
Q Consensus 122 ~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~f~V~~ 173 (450)
+..+-.|+|.+. |-.|+++.+++.|++.|++|.... | .-.|-..|..
T Consensus 59 ~~~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~iS--t---y~tD~IlVp~ 108 (134)
T 1zhv_A 59 DPGWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVS--T---FDGDHLLVRS 108 (134)
T ss_dssp EEEEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEE--C---SSCEEEEEEG
T ss_pred CCCeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEE--e---ccccEEEEeH
Confidence 345666776654 888999999999999999987544 3 2345555554
No 80
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=25.07 E-value=64 Score=32.65 Aligned_cols=120 Identities=17% Similarity=0.217 Sum_probs=68.6
Q ss_pred CeEEEEEEc---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCcCccCCC
Q 044728 35 KATLIKVDS---ANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGPRARSFR 111 (450)
Q Consensus 35 ~~~~V~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~~~~~~~ 111 (450)
+.+.|+|.+ .+.+|..+++..+|++.|++|.--.. +... -+|.|...+...-......+++...|....
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~s-s~~s---is~~v~~~~~~~~~~~~~~~~~~~el~~~~---- 378 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITT-SEVS---VALTLDTTGSTSTGDTLLTQSLLMELSALC---- 378 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEEE-ETTE---EEEEECCCCCSSTTCCSSCHHHHHHHHHHS----
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEEe-CCCe---EEEEEeccccchhhHHHHHHHHHHHhccCC----
Confidence 335566654 57789999999999999999875442 2211 236654432210000112333333332111
Q ss_pred CcceeeeccCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEEeeCCe-EEEEEEEee
Q 044728 112 SLRRSVGVQAALEHTTIELTGR---DRPGLLSEVFAVLSDLKCNVMGAEVWTHNSR-MASVVYITS 173 (450)
Q Consensus 112 ~~~r~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~-~~d~f~V~~ 173 (450)
.+ ....+...|.|++. ..||..+++..+|++ +||.- .+.|.. ..-.|.|..
T Consensus 379 ----~v--~~~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~m---Isqg~Se~~Is~vV~~ 433 (449)
T 2j0w_A 379 ----RV--EVEEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRM---ICYGASSHNLCFLVPG 433 (449)
T ss_dssp ----CE--EEEEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCE---EEESSCTTEEEEEEEG
T ss_pred ----eE--EEeCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEE---EEecCCCcEEEEEEeH
Confidence 11 12456788999986 688999999999966 66653 333322 233455554
No 81
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=22.77 E-value=63 Score=27.07 Aligned_cols=28 Identities=25% Similarity=0.357 Sum_probs=23.4
Q ss_pred CCCcchHHHHHHHHHHCCceEEEEEEeecC
Q 044728 345 EDRAGLLSDVTRIFRENGLSVTRAEVTTRG 374 (450)
Q Consensus 345 ~DrpGLL~~It~~l~~~gi~I~~AkI~T~g 374 (450)
.|-.|+++.|+..|++.||+|.. |+||-
T Consensus 73 ~~~vGilA~is~pLA~agIsif~--iSty~ 100 (134)
T 1zhv_A 73 FDETGIVLSVISPLSTNGIGIFV--VSTFD 100 (134)
T ss_dssp CSSCCHHHHHHHHHHTTTCCCEE--EECSS
T ss_pred ccHHHHHHHHHHHHHhCCCCeEE--EEecc
Confidence 37889999999999999999976 45553
No 82
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=22.65 E-value=2.3e+02 Score=21.76 Aligned_cols=59 Identities=12% Similarity=0.242 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHHHhhcccccc
Q 044728 348 AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVK 411 (450)
Q Consensus 348 pGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~~~~l~~~ 411 (450)
.-+++++++.| ...+||..+.|...+++..-.+.|.-. |. ++..++..+.|.+.-+.++
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l~-G~---~~~~~~ai~~L~~~~v~vE 95 (100)
T 2qsw_A 37 LPIISHIVQEY-QVEVSIIQGNIQQTKQGAVGSLYIQLL-GE---EQNILAAIEGLRKLRVETE 95 (100)
T ss_dssp SCHHHHHHHHH-TCEEEEEEEEEEEETTEEEEEEEEEEE-SC---HHHHHHHHHHHHHTTCEEE
T ss_pred chHHHHHHHHh-CCCEEEEEeeceEcCCeeEEEEEEEEE-CC---HHHHHHHHHHHHHcCCEEE
Confidence 35778887777 578899999999999999888888654 32 2455666677766555543
No 83
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=22.23 E-value=2.7e+02 Score=21.42 Aligned_cols=85 Identities=9% Similarity=0.109 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeCCC---cchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHH
Q 044728 321 RVINCLEAAIKRRTSEGISLELCCEDR---AGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIE 397 (450)
Q Consensus 321 ~l~~~L~~~L~~r~~~~t~iev~~~Dr---pGLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~~~g~~l~~~~~~ 397 (450)
.++..|.+....+ +...++.+.=... .-+++++++.| ...+||..+.|...++...-.+.|.-. |. +++..+
T Consensus 5 ~~~~~~~~L~~~~-~~~~lvrL~f~g~~~~~PvIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l~-G~--~~~~~~ 79 (98)
T 3ced_A 5 DFETSLTELEPLE-KDAYIVRLVFAGSTTTEPIVSSLSTAY-DIKINILEANIKNTKNGTVGFLVLHIP-YI--SSVDFG 79 (98)
T ss_dssp HHHHHHHHTCSCC-TTCEEEEEEEEEESCHHHHHHHHHHHH-TCCCEEEEEEEEEETTEEEEEEEEEES-CC--CHHHHH
T ss_pred hHHHHHHHhhccC-CCCEEEEEEECCCccCchHHHHHHHHH-CCcEEEEEEEeEEeCCEeEEEEEEEEe-CC--CHHHHH
Confidence 3444454432222 2333444443333 34677777766 478899999999999999888888654 31 134556
Q ss_pred HHHHHHhhccccc
Q 044728 398 SVRKEIGLTILRV 410 (450)
Q Consensus 398 ~L~~~l~~~~l~~ 410 (450)
+..+.|.+.-+.+
T Consensus 80 ~ai~~L~~~~v~v 92 (98)
T 3ced_A 80 KFEKELIERQVKM 92 (98)
T ss_dssp HHHHHHHHTTCEE
T ss_pred HHHHHHHHCCCEE
Confidence 6667776655544
No 84
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=22.07 E-value=2.6e+02 Score=21.83 Aligned_cols=61 Identities=15% Similarity=0.175 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHHHhhccccccccc
Q 044728 349 GLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVVDASGNPVKSETIESVRKEIGLTILRVKDDA 414 (450)
Q Consensus 349 GLL~~It~~l~~~gi~I~~AkI~T~g~~a~D~F~v~~~~g~~l~~~~~~~L~~~l~~~~l~~~~~~ 414 (450)
.+++++++.| ...+||-.+.|...++...-.+.|.-. |. ++..++..+.|.+.-+.++-.+
T Consensus 36 PiIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l~-G~---~~~~~~ai~~L~~~~v~vEvl~ 96 (106)
T 3dhx_A 36 PLLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEMH-GT---QQDTQAAIAWLQEHHVKVEVLG 96 (106)
T ss_dssp CHHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEEE-SC---HHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHH-CCCEEEEEEEeEEECCeeEEEEEEEEe-CC---HHHHHHHHHHHHHCCCEEEEee
Confidence 3676666665 356899999999999999998888544 32 3456677777777666655443
No 85
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=21.54 E-value=3.1e+02 Score=21.87 Aligned_cols=65 Identities=17% Similarity=0.150 Sum_probs=0.0
Q ss_pred CCeEEEEEEcCCCcchHHHHHHHHHhC---CceEEEEEEEecCCeEEEEEEEEeCCCCCCCchHHHHHHHHHhCc
Q 044728 34 RKATLIKVDSANKRGSLLELVQVLNDL---DLIIRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVSERIQQSLGP 105 (450)
Q Consensus 34 ~~~~~V~V~~~DrpGLl~~i~~~L~~~---glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~i~~~L~~ 105 (450)
+..+.++|.+++.+++...|..++... +.++ .-+-+..+.|..-+..|.-.+ .+.+..|-+.|..
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v~v~S------~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITINATH------IEQVETLYEELGK 101 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEECCSS------HHHHHHHHHHHSC
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEEEECC------HHHHHHHHHHHhc
No 86
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=21.16 E-value=2.6e+02 Score=22.52 Aligned_cols=47 Identities=15% Similarity=0.065 Sum_probs=34.3
Q ss_pred EEEEEEcCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCC
Q 044728 37 TLIKVDSANKRGSLLELVQVLNDLDLIIRRAYISSDGEWFMDVFHVTDQNGNKL 90 (450)
Q Consensus 37 ~~V~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~ 90 (450)
.-+.+.+.| +..+...|.+.|+.|...-.....|+ .|++.|++|+.+
T Consensus 67 ~hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G~---~~~~~DPdG~~i 113 (144)
T 3r6a_A 67 TQATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTGR---NMTVRHSDGSVI 113 (144)
T ss_dssp CCEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTEE---EEEEECTTSCEE
T ss_pred eEEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCce---EEEEECCCCCEE
Confidence 445556666 66778889999999987665556664 378899999854
Done!