Query 044730
Match_columns 419
No_of_seqs 349 out of 1918
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:32:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044730.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044730hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.7 4.4E-17 1.5E-21 149.0 14.5 159 108-321 4-163 (195)
2 2nyi_A Unknown protein; protei 99.7 7.9E-17 2.7E-21 147.3 14.5 155 248-414 4-161 (195)
3 1u8s_A Glycine cleavage system 99.7 2.9E-15 1E-19 136.3 17.3 152 249-414 6-164 (192)
4 1u8s_A Glycine cleavage system 99.7 6.1E-15 2.1E-19 134.3 19.0 157 108-321 5-166 (192)
5 3p96_A Phosphoserine phosphata 98.8 1.6E-07 5.5E-12 94.8 18.8 135 248-392 11-149 (415)
6 3p96_A Phosphoserine phosphata 98.8 2.2E-07 7.5E-12 93.8 19.6 127 107-284 10-137 (415)
7 1zpv_A ACT domain protein; str 98.2 6.9E-06 2.3E-10 64.6 9.9 65 109-179 5-69 (91)
8 2f06_A Conserved hypothetical 98.2 7.9E-05 2.7E-09 63.7 17.4 100 250-375 7-106 (144)
9 2f06_A Conserved hypothetical 98.1 0.00022 7.5E-09 60.9 17.1 110 21-156 7-118 (144)
10 2ko1_A CTR148A, GTP pyrophosph 97.8 9.8E-05 3.3E-09 57.2 9.4 64 109-178 5-68 (88)
11 2ko1_A CTR148A, GTP pyrophosph 97.8 8.1E-05 2.8E-09 57.7 8.4 63 341-413 5-67 (88)
12 1zpv_A ACT domain protein; str 97.8 0.00019 6.4E-09 56.2 10.5 65 341-415 5-69 (91)
13 3nrb_A Formyltetrahydrofolate 97.8 0.00087 3E-08 64.2 17.1 66 107-178 5-71 (287)
14 3obi_A Formyltetrahydrofolate 97.8 0.00094 3.2E-08 64.0 17.2 67 108-178 5-72 (288)
15 2re1_A Aspartokinase, alpha an 97.7 0.00055 1.9E-08 60.1 13.1 106 248-372 24-137 (167)
16 3lou_A Formyltetrahydrofolate 97.7 0.0013 4.3E-08 63.2 16.5 69 107-178 8-78 (292)
17 3o1l_A Formyltetrahydrofolate 97.7 0.0013 4.6E-08 63.3 16.3 67 108-178 21-88 (302)
18 3n0v_A Formyltetrahydrofolate 97.7 0.0017 5.7E-08 62.2 16.9 67 107-178 6-73 (286)
19 2re1_A Aspartokinase, alpha an 97.6 0.0048 1.7E-07 54.0 17.4 114 106-284 22-139 (167)
20 2dt9_A Aspartokinase; protein- 97.5 0.003 1E-07 55.3 15.0 122 248-394 15-143 (167)
21 3l76_A Aspartokinase; alloster 97.4 0.18 6.3E-06 53.0 30.2 289 18-394 268-575 (600)
22 2dtj_A Aspartokinase; protein- 97.4 0.0041 1.4E-07 55.1 14.5 106 248-372 14-129 (178)
23 2f1f_A Acetolactate synthase i 97.3 0.00083 2.8E-08 58.9 9.4 65 109-179 3-68 (164)
24 3obi_A Formyltetrahydrofolate 97.2 0.018 6.2E-07 55.0 17.8 112 249-370 6-118 (288)
25 3l76_A Aspartokinase; alloster 97.2 0.035 1.2E-06 58.5 21.1 198 108-375 269-479 (600)
26 2f1f_A Acetolactate synthase i 97.1 0.0016 5.5E-08 57.1 9.0 65 342-415 4-68 (164)
27 2pc6_A Probable acetolactate s 97.1 0.0019 6.6E-08 56.6 9.3 65 109-179 4-69 (165)
28 2pc6_A Probable acetolactate s 97.0 0.002 6.9E-08 56.5 8.3 66 342-416 5-70 (165)
29 3o1l_A Formyltetrahydrofolate 97.0 0.021 7.3E-07 54.9 16.0 36 249-284 22-57 (302)
30 3n0v_A Formyltetrahydrofolate 97.0 0.036 1.2E-06 52.8 17.4 36 249-284 8-43 (286)
31 3nrb_A Formyltetrahydrofolate 96.9 0.037 1.3E-06 52.8 17.3 109 248-370 6-117 (287)
32 3s1t_A Aspartokinase; ACT doma 96.9 0.09 3.1E-06 46.5 18.3 113 107-284 14-132 (181)
33 3lou_A Formyltetrahydrofolate 96.8 0.044 1.5E-06 52.4 16.4 36 249-284 10-45 (292)
34 2dt9_A Aspartokinase; protein- 96.8 0.02 7E-07 49.9 13.0 110 106-279 13-128 (167)
35 2dtj_A Aspartokinase; protein- 96.7 0.031 1.1E-06 49.3 13.9 113 107-284 13-131 (178)
36 3s1t_A Aspartokinase; ACT doma 96.6 0.089 3.1E-06 46.6 16.1 123 248-394 15-144 (181)
37 1y7p_A Hypothetical protein AF 96.5 0.0057 1.9E-07 55.6 7.2 62 109-178 4-69 (223)
38 1y7p_A Hypothetical protein AF 96.5 0.0049 1.7E-07 56.0 6.7 52 341-392 4-56 (223)
39 2fgc_A Acetolactate synthase, 96.4 0.014 4.7E-07 52.3 9.2 67 108-180 28-95 (193)
40 2fgc_A Acetolactate synthase, 96.3 0.011 3.9E-07 52.8 8.1 67 341-416 29-95 (193)
41 4go7_X Aspartokinase; transfer 96.2 0.076 2.6E-06 47.9 13.3 115 105-284 31-151 (200)
42 4go7_X Aspartokinase; transfer 95.9 0.22 7.6E-06 44.8 14.7 124 247-394 33-163 (200)
43 2jhe_A Transcription regulator 95.9 0.032 1.1E-06 48.4 9.0 59 111-178 2-60 (190)
44 2jhe_A Transcription regulator 95.8 0.01 3.5E-07 51.6 5.6 34 343-376 2-35 (190)
45 3ab4_A Aspartokinase; aspartat 95.7 0.31 1.1E-05 48.8 16.4 109 248-372 263-378 (421)
46 3ab4_A Aspartokinase; aspartat 95.5 0.93 3.2E-05 45.3 19.2 137 108-321 263-405 (421)
47 3c1m_A Probable aspartokinase; 95.2 0.23 7.7E-06 50.7 13.7 135 248-417 317-468 (473)
48 2qmx_A Prephenate dehydratase; 95.1 0.056 1.9E-06 51.4 8.4 54 341-398 200-253 (283)
49 3mwb_A Prephenate dehydratase; 94.8 0.066 2.3E-06 51.6 8.0 59 341-404 201-260 (313)
50 3luy_A Probable chorismate mut 94.5 0.15 5.2E-06 49.4 9.6 57 343-404 208-266 (329)
51 3tvi_A Aspartokinase; structur 94.0 0.52 1.8E-05 47.7 12.9 121 248-394 297-424 (446)
52 2qmw_A PDT, prephenate dehydra 93.2 0.32 1.1E-05 45.7 9.0 66 341-413 186-254 (267)
53 2cdq_A Aspartokinase; aspartat 91.7 1.8 6.2E-05 44.4 13.2 121 248-392 340-467 (510)
54 3tvi_A Aspartokinase; structur 91.4 8 0.00027 38.9 17.3 34 248-283 373-409 (446)
55 3mah_A Aspartokinase; aspartat 90.9 0.92 3.2E-05 38.7 8.6 114 248-394 17-136 (157)
56 1ygy_A PGDH, D-3-phosphoglycer 90.6 1.1 3.7E-05 46.2 10.3 51 340-392 453-503 (529)
57 3c1m_A Probable aspartokinase; 90.3 7.3 0.00025 39.4 16.0 115 108-279 317-437 (473)
58 1sc6_A PGDH, D-3-phosphoglycer 89.9 0.76 2.6E-05 45.8 8.1 48 341-392 331-378 (404)
59 1sc6_A PGDH, D-3-phosphoglycer 89.8 1.1 3.8E-05 44.6 9.3 50 108-158 330-379 (404)
60 1ygy_A PGDH, D-3-phosphoglycer 87.6 2.1 7.1E-05 44.1 9.8 64 106-173 451-515 (529)
61 2qmx_A Prephenate dehydratase; 87.1 1.9 6.5E-05 40.8 8.4 53 249-303 200-253 (283)
62 1phz_A Protein (phenylalanine 85.1 1.1 3.7E-05 44.7 5.8 67 341-414 34-100 (429)
63 3luy_A Probable chorismate mut 84.6 6 0.00021 38.1 10.6 44 258-303 217-261 (329)
64 3mwb_A Prephenate dehydratase; 84.5 2.7 9.4E-05 40.2 8.2 54 248-303 200-255 (313)
65 2qmw_A PDT, prephenate dehydra 82.7 3.6 0.00012 38.5 8.0 51 248-300 185-239 (267)
66 3k5p_A D-3-phosphoglycerate de 81.3 11 0.00038 37.5 11.4 50 107-157 341-390 (416)
67 3mtj_A Homoserine dehydrogenas 80.3 1.5 5.1E-05 44.2 4.7 35 339-373 357-391 (444)
68 2cdq_A Aspartokinase; aspartat 75.4 41 0.0014 34.3 13.8 60 249-321 420-482 (510)
69 3k5p_A D-3-phosphoglycerate de 73.2 5.9 0.0002 39.5 6.7 49 340-395 342-390 (416)
70 3mtj_A Homoserine dehydrogenas 69.8 8 0.00027 38.9 6.9 51 108-158 358-409 (444)
71 1phz_A Protein (phenylalanine 61.8 9.2 0.00031 38.1 5.3 52 247-300 32-84 (429)
72 2j0w_A Lysine-sensitive aspart 50.7 15 0.00053 36.8 5.0 121 248-394 307-434 (449)
73 3mah_A Aspartokinase; aspartat 43.7 57 0.0019 27.2 6.9 103 18-144 16-124 (157)
74 1zhv_A Hypothetical protein AT 41.7 59 0.002 26.8 6.4 35 248-284 61-98 (134)
75 3rri_A Glyoxalase/bleomycin re 34.7 56 0.0019 25.4 5.2 45 354-400 80-124 (135)
76 1zvp_A Hypothetical protein VC 31.8 1.3E+02 0.0046 24.6 7.0 36 247-284 69-107 (133)
77 3g12_A Putative lactoylglutath 30.7 1.3E+02 0.0046 23.3 6.9 48 19-73 66-114 (128)
78 1ib8_A Conserved protein SP14. 27.4 2.8E+02 0.0096 23.4 9.2 94 262-369 14-107 (164)
79 1zhv_A Hypothetical protein AT 24.3 66 0.0023 26.5 3.8 35 342-378 63-100 (134)
80 3zw5_A Glyoxalase domain-conta 23.8 80 0.0027 25.2 4.3 43 355-400 101-143 (147)
81 1zvp_A Hypothetical protein VC 23.2 1E+02 0.0036 25.3 4.8 36 341-378 71-109 (133)
82 2ovm_B NCOR, progesterone rece 21.0 33 0.0011 19.6 0.9 13 406-418 11-23 (26)
83 1rwu_A Hypothetical UPF0250 pr 21.0 3.1E+02 0.01 21.6 8.7 41 107-150 34-77 (109)
84 3g12_A Putative lactoylglutath 20.6 2.9E+02 0.01 21.2 7.6 48 107-162 65-113 (128)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.73 E-value=4.4e-17 Score=149.02 Aligned_cols=159 Identities=10% Similarity=0.082 Sum_probs=109.8
Q ss_pred CeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhcccccch
Q 044730 108 SLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEYSISC 187 (419)
Q Consensus 108 ~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~~~~~ 187 (419)
..+.|+|+|+||||||+.|+++|+++||||++|++++..+++++ .|.|..+.. ..+.++++|++.|..++.+.
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~---- 76 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQIST---- 76 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEE----
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhc----
Confidence 36799999999999999999999999999999999996666665 777765421 22346777777766533221
Q ss_pred hhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEecCCccHHHHHH
Q 044730 188 EIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCADQKGLFYDIL 267 (419)
Q Consensus 188 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~DrpGLl~~i~ 267 (419)
.+ .. .+ + ..+ . ......++|+|.|+|||||+++|+
T Consensus 77 --~~---~~-------~~------------------------~----~~~----~-~~~~~~~iltv~g~DrpGiva~Vt 111 (195)
T 2nyi_A 77 --RR---AS-------SV------------------------A----ERH----V-SPDTREYELYVEGPDSEGIVEAVT 111 (195)
T ss_dssp --EE---CC-------CC------------------------------------C-CTTEEEEEEEEEEECCTTHHHHHH
T ss_pred --CC---eE-------EE------------------------E----eCC----c-CCCCcEEEEEEEeCCCcCHHHHHH
Confidence 00 00 00 0 000 0 223356799999999999999999
Q ss_pred HHHHhCCceEEEEEEEEeecCceeEeEEEEe-cCCCCCCCHHHHHHHHHHHHHHh
Q 044730 268 RTSKDLNIQIAYGRISSSVKGYRNMDLFIRQ-TDGKKVVDPKQQTALCFHLKEEM 321 (419)
Q Consensus 268 ~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~-~~g~~i~~~~~~~~l~~~L~~al 321 (419)
++|+++|+||.+++..+....+...+.|++. ..+.+ ++.. +.|++.|....
T Consensus 112 ~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a 163 (195)
T 2nyi_A 112 AVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVE 163 (195)
T ss_dssp HHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHH
T ss_pred HHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHH
Confidence 9999999999999988632113456778775 32222 2234 77777777544
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.71 E-value=7.9e-17 Score=147.29 Aligned_cols=155 Identities=16% Similarity=0.170 Sum_probs=108.6
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcCC-Ce
Q 044730 248 AHTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLHP-LR 326 (419)
Q Consensus 248 ~~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~~-~~ 326 (419)
..++|+|+|+|||||++.|+++|+++|+||.+|++++ ..|..+. .|.+...+. ..+.+++.|++.|...+... ..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~-~~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~~~ 79 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMAC-LGGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQISTRRA 79 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ETTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEE-ECCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhcCCe
Confidence 3578999999999999999999999999999999997 4545444 666652221 22335666666665443211 11
Q ss_pred eeeeCCCCCCCCCcceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccC--CceeEEEEEEEecCCCCCCCCHHH
Q 044730 327 VMVTNRGPDTELLVANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTS--HRQWEVYRFLLDESLEFPLASSQA 404 (419)
Q Consensus 327 v~~~~~~~~~~~~~~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~G--e~~~~~d~F~v~d~~g~~l~~~~~ 404 (419)
..+..+ ........++|+|.|+|||||+++||.+|+++|+||..+++.| .+ ++ +.+.||++..-+.+ ++..
T Consensus 80 ~~~~~~-~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t--~~~~~~--~~~~F~m~~~~~~~--~~~~ 152 (195)
T 2nyi_A 80 SSVAER-HVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETET--LPAPFA--GFTLFRMGSRVAFP--FPLY 152 (195)
T ss_dssp CCC-----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--EECSST--TCEEEEEEEEEEEE--GGGH
T ss_pred EEEEeC-CcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeee--cccccC--CCCeEEEEEEEEcC--CCcc
Confidence 111110 0011224689999999999999999999999999999999999 66 66 78999997655433 2333
Q ss_pred HHHHHHHHHH
Q 044730 405 RNRIVEKVKK 414 (419)
Q Consensus 405 ~~~i~~~l~~ 414 (419)
++++++|..
T Consensus 153 -~~l~~~l~~ 161 (195)
T 2nyi_A 153 -QEVVTALSR 161 (195)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 566666654
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.66 E-value=2.9e-15 Score=136.34 Aligned_cols=152 Identities=15% Similarity=0.087 Sum_probs=105.7
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcC-CCee
Q 044730 249 HTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLH-PLRV 327 (419)
Q Consensus 249 ~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~-~~~v 327 (419)
.++|+|.|+|||||+++|+++|+++|+||.++++.+ .. +.+.-.|.+..+ +...+.|++.|...... ...+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~-~~-~~f~~~~~v~~~------~~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM-FG-KEFTLLMLISGS------PSNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ET-TEEEEEEEEEEC------HHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeee-cC-CceEEEEEEecC------CCCHHHHHHHHHHHHHhcCCEE
Confidence 468999999999999999999999999999999997 44 444335666421 23567888888765521 2222
Q ss_pred eee--CCCCCCCCCcceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCC----ceeEEEEEEEecCCCCCCCC
Q 044730 328 MVT--NRGPDTELLVANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSH----RQWEVYRFLLDESLEFPLAS 401 (419)
Q Consensus 328 ~~~--~~~~~~~~~~~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge----~~~~~d~F~v~d~~g~~l~~ 401 (419)
.+. .+.+.......+.|+|.++||||++++|+.+|+++|+||..++..| .++ + ..+.||++..-+.+ +
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t--~~~~~~~~--~~~~F~~~~~~~~~--~ 151 (192)
T 1u8s_A 78 MMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQT--ISKDKLHS--EQNQFHIAISARVD--S 151 (192)
T ss_dssp EEEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEE--EC----------CEEEEEEEEEEC--T
T ss_pred EEEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhc--ccCCccCC--CCCEEEEEEEEeCC--C
Confidence 221 2212112235689999999999999999999999999999999999 554 5 78999997643322 1
Q ss_pred HHHHHHHHHHHHH
Q 044730 402 SQARNRIVEKVKK 414 (419)
Q Consensus 402 ~~~~~~i~~~l~~ 414 (419)
+...+++++++..
T Consensus 152 ~~~~~~l~~~l~~ 164 (192)
T 1u8s_A 152 GCNLMQLQEEFDA 164 (192)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 2123556666654
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.65 E-value=6.1e-15 Score=134.25 Aligned_cols=157 Identities=10% Similarity=0.044 Sum_probs=107.9
Q ss_pred CeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhcccccch
Q 044730 108 SLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEYSISC 187 (419)
Q Consensus 108 ~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~~~~~ 187 (419)
..+.|+|+|+||||+|++|+++|+++||||.++++++.. |.+.-.|.|..+ +.++++|++.|..+....
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~-~~f~~~~~v~~~------~~~~~~l~~~L~~~~~~~---- 73 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFG-KEFTLLMLISGS------PSNITRVETTLPLLGQQH---- 73 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET-TEEEEEEEEEEC------HHHHHHHHHHHHHHHHHH----
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecC-CceEEEEEEecC------CCCHHHHHHHHHHHHHhc----
Confidence 357899999999999999999999999999999999955 554447777642 247788888888755321
Q ss_pred hhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEecCCccHHHHHH
Q 044730 188 EIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCADQKGLFYDIL 267 (419)
Q Consensus 188 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~DrpGLl~~i~ 267 (419)
.+ .. .+. ..+ .++ +..+...++|+|.|+||||++++|+
T Consensus 74 --~~---~~-----------~~~----------------~~~-----~~~-----~~~~~~~~~l~v~~~D~~Gil~~v~ 111 (192)
T 1u8s_A 74 --DL---IT-----------MMK----------------RTS-----PHD-----HQTHAYTVEVYVESDDKLGLTEKFT 111 (192)
T ss_dssp --TC---EE-----------EEE----------------EEC-----CCC-----CCCCSEEEEEEEEESCCTTHHHHHH
T ss_pred --CC---EE-----------EEE----------------eCC-----CCC-----CccCCceEEEEEEeCCCccHHHHHH
Confidence 10 00 000 000 011 2333456799999999999999999
Q ss_pred HHHHhCCceEEEEEEEEeecCc----eeEeEEEEe-cCCCCCCCHHHHHHHHHHHHHHh
Q 044730 268 RTSKDLNIQIAYGRISSSVKGY----RNMDLFIRQ-TDGKKVVDPKQQTALCFHLKEEM 321 (419)
Q Consensus 268 ~~L~~~~~~I~~A~I~t~t~g~----~~~d~F~v~-~~g~~i~~~~~~~~l~~~L~~al 321 (419)
.+|+++|+||.+++..+ .+. ...+.|++. .-+.+ ++...+.|++.|....
T Consensus 112 ~~l~~~~~nI~~~~~~t--~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 112 QFFAQRQIGMASLSAQT--ISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDALC 166 (192)
T ss_dssp HHHHHTTCCEEEEEEEE--EC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHHH
T ss_pred HHHHHcCCcHHHhhhhc--ccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHHH
Confidence 99999999999988886 332 466778765 22211 1223566777776544
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.81 E-value=1.6e-07 Score=94.76 Aligned_cols=135 Identities=13% Similarity=0.049 Sum_probs=89.2
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhc-CCCe
Q 044730 248 AHTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEML-HPLR 326 (419)
Q Consensus 248 ~~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~-~~~~ 326 (419)
...+|+|.|+|||||++.|+++|+++|+||.+.+-.. .++.+.-...+...... ...+.|++.|...-. -...
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~--~~~~f~~~~~~~~~~~~----~~~~~l~~~l~~~~~~~~~~ 84 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVV--IRHRLTLGVLVCCPADV----ADGPALRHDVEAAIRKVGLD 84 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEE--ETTEEEEEEEEEECHHH----HTSHHHHHHHHHHHHHTTCE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEE--ECCEeEEEEEEEecCCc----CCHHHHHHHHHHHHHHcCeE
Confidence 3568999999999999999999999999999977764 34443322222211110 022556666654321 1233
Q ss_pred eeeeC--CCCCCCCCcceEEEEEeCC-CcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEe
Q 044730 327 VMVTN--RGPDTELLVANPVELCGKG-RPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLD 392 (419)
Q Consensus 327 v~~~~--~~~~~~~~~~t~lev~~~D-RpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~ 392 (419)
+.+.. .........+..+++.+.| +||++.+|+.+|.++|+||...+.-+.. .. ..--|++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~--~~--~~~~~~v~ 149 (415)
T 3p96_A 85 VSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDY--PV--IGLELRVS 149 (415)
T ss_dssp EEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESS--SS--EEEEEEEE
T ss_pred EEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCC--Cc--eEEEEEee
Confidence 33322 1111123357899999999 9999999999999999999988887722 33 33346664
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.81 E-value=2.2e-07 Score=93.78 Aligned_cols=127 Identities=13% Similarity=0.089 Sum_probs=86.9
Q ss_pred CCeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhcccccc
Q 044730 107 PSLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEYSIS 186 (419)
Q Consensus 107 ~~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~~~~ 186 (419)
+..+.|++.|+||||+.+.|+++|+++||||++++.++ ..|++.-.+.+.-+.. ....+.+++.|.. +...
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~-~~~~f~~~~~~~~~~~----~~~~~~l~~~l~~-~~~~--- 80 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVV-IRHRLTLGVLVCCPAD----VADGPALRHDVEA-AIRK--- 80 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEE-ETTEEEEEEEEEECHH----HHTSHHHHHHHHH-HHHH---
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEE-ECCEeEEEEEEEecCC----cCCHHHHHHHHHH-HHHH---
Confidence 35789999999999999999999999999999999988 4576655555543110 1124677777776 3222
Q ss_pred hhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEecC-CccHHHH
Q 044730 187 CEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCAD-QKGLFYD 265 (419)
Q Consensus 187 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~D-rpGLl~~ 265 (419)
+.+ ... +.+. +. .+ ......+..+++.+++ +||++.+
T Consensus 81 --~~~---~~~-------~~~~--------------------~~-----~~-----~~~~~~~~~~~llg~~~~~~~~~~ 118 (415)
T 3p96_A 81 --VGL---DVS-------IERS--------------------DD-----VP-----IIREPSTHTIFVLGRPITAAAFGA 118 (415)
T ss_dssp --TTC---EEE-------EEEC--------------------SS-----SC-----SSCCCCSEEEEEEESSCCHHHHHH
T ss_pred --cCe---EEE-------EEEC--------------------Cc-----cc-----ccCCCCcEEEEEEeCCCCHHHHHH
Confidence 111 000 0000 00 00 0123457789999999 9999999
Q ss_pred HHHHHHhCCceEEEEEEEE
Q 044730 266 ILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 266 i~~~L~~~~~~I~~A~I~t 284 (419)
++.+|+++|+||...+-.+
T Consensus 119 i~~~l~~~~~Ni~~l~~~~ 137 (415)
T 3p96_A 119 VAREVAALGVNIDLIRGVS 137 (415)
T ss_dssp HHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHcCCCccceeecc
Confidence 9999999999999865554
No 7
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.23 E-value=6.9e-06 Score=64.57 Aligned_cols=65 Identities=14% Similarity=0.171 Sum_probs=51.8
Q ss_pred eeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHHH
Q 044730 109 LYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIAV 179 (419)
Q Consensus 109 ~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~v 179 (419)
.+.|++.|+||||++++|+++|+++|+||.+....+. +|.+.-.+.+.-+ +...++++.+.|+.+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~-~~~~~~~i~v~~~-----~~~~l~~l~~~L~~~ 69 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL-DEYFTMMAVVSSD-----EKQDFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE-TTEEEEEEEEEES-----SCCCHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE-cCEEEEEEEEEeC-----CCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999999999885 4776656666432 223477788888773
No 8
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.23 E-value=7.9e-05 Score=63.74 Aligned_cols=100 Identities=18% Similarity=0.122 Sum_probs=67.0
Q ss_pred EEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcCCCeeee
Q 044730 250 TLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLHPLRVMV 329 (419)
Q Consensus 250 t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~~~~v~~ 329 (419)
..++|..+|+||.++++++.|++.|+||..-.+.. +. +.. ++.+.. .++ ++.++.|++. +..+.
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~-~~-~~~--~~~~~~-----~d~---~~a~~~L~~~---G~~v~- 70 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE-NA-DFG--ILRGIV-----SDP---DKAYKALKDN---HFAVN- 70 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE-CS-SCE--EEEEEE-----SCH---HHHHHHHHHT---TCCEE-
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe-cC-CCC--EEEEEe-----CCH---HHHHHHHHHc---CCeEe-
Confidence 36888999999999999999999999999844432 11 211 122221 233 2333334421 11110
Q ss_pred eCCCCCCCCCcceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEe
Q 044730 330 TNRGPDTELLVANPVELCGKGRPRVFYDVTLALKALGICIFSAEIG 375 (419)
Q Consensus 330 ~~~~~~~~~~~~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~ 375 (419)
...++-+.-+|+||.+++++++|++.|+||....+.
T Consensus 71 ----------~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~ 106 (144)
T 2f06_A 71 ----------ITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSF 106 (144)
T ss_dssp ----------EEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ----------eeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence 123577778899999999999999999999876665
No 9
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.08 E-value=0.00022 Score=60.92 Aligned_cols=110 Identities=10% Similarity=0.031 Sum_probs=78.2
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhcCeEEEEEEeee--CCCeEEEEEEEEcCCCCCCCCHHHHHHHHHhhCCCCccccccC
Q 044730 21 SVVTVNCPDKNGLGCDLCRIILEFGLFIVRGDFST--DGRWCYIVLWVVPDASSDKVDWESLKNRLLSVCPSILVSYYFN 98 (419)
Q Consensus 21 t~v~v~~~dk~Gll~d~~~~l~d~~l~I~k~~ist--dg~w~~dvf~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (419)
.-|+|.-+||+|.+.++.+.|.+.|.+|.--.++. |.+ ++.++- .+.+..++.|++..-.
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~----~~~~~~------~d~~~a~~~L~~~G~~-------- 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFG----ILRGIV------SDPDKAYKALKDNHFA-------- 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCE----EEEEEE------SCHHHHHHHHHHTTCC--------
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCC----EEEEEe------CCHHHHHHHHHHcCCe--------
Confidence 45778889999999999999999999998775543 533 232331 2556666777654311
Q ss_pred CCCCCCCCCCeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEE
Q 044730 99 QPSSNSSKPSLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFI 156 (419)
Q Consensus 99 ~~~v~~~~~~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V 156 (419)
......+.+..+|+||.+++++++|+++|+||.....+. .+++...+|.+
T Consensus 69 -------v~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~-~~~~~~~~i~~ 118 (144)
T 2f06_A 69 -------VNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA-NNNVANVVIRP 118 (144)
T ss_dssp -------EEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEEE
T ss_pred -------EeeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc-cCCcEEEEEEe
Confidence 011235666779999999999999999999998766653 35666656655
No 10
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.83 E-value=9.8e-05 Score=57.19 Aligned_cols=64 Identities=14% Similarity=0.229 Sum_probs=46.9
Q ss_pred eeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHH
Q 044730 109 LYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIA 178 (419)
Q Consensus 109 ~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~ 178 (419)
.+.|.+.++||||++++|+++|++.|+||.+..+.+. ++.+...|.+.- .+.+.++++.+.|++
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~-~~~~~~~i~v~~-----~~~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAK-DGIFTCNLMIFV-----KNTDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEEC-SSEEEEEEEEEE-----SSHHHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEc-CCEEEEEEEEEE-----CCHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999999884 445544444432 234455555555543
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.80 E-value=8.1e-05 Score=57.67 Aligned_cols=63 Identities=6% Similarity=0.141 Sum_probs=48.5
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHHHHHHHHHHH
Q 044730 341 ANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQARNRIVEKVK 413 (419)
Q Consensus 341 ~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~~~~i~~~l~ 413 (419)
.+.|.+.+.||||+|++|+.+|++.|+||.++.+.+ .++. +...|.+.-. +....+++.++|+
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~--~~~~--~~~~i~v~~~------~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNA--KDGI--FTCNLMIFVK------NTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEE--CSSE--EEEEEEEEES------SHHHHHHHHHHHT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEE--cCCE--EEEEEEEEEC------CHHHHHHHHHHHh
Confidence 567999999999999999999999999999999988 4443 6666666432 3445566666654
No 12
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=97.79 E-value=0.00019 Score=56.16 Aligned_cols=65 Identities=9% Similarity=0.055 Sum_probs=46.8
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHHHHHHHHHHHHH
Q 044730 341 ANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQARNRIVEKVKKT 415 (419)
Q Consensus 341 ~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~~~~i~~~l~~~ 415 (419)
...|.+.++||||+|++|+.+|+++|+||.+....+ .+.. ..-.|.+.-.+.. ..+++.++|++.
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~--~~~~--~~~~i~v~~~~~~------~l~~l~~~L~~~ 69 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTV--LDEY--FTMMAVVSSDEKQ------DFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTE--EEEEEEEEESSCC------CHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEE--EcCE--EEEEEEEEeCCCC------CHHHHHHHHHHH
Confidence 467999999999999999999999999999999887 3333 4444444322211 235666666643
No 13
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.79 E-value=0.00087 Score=64.16 Aligned_cols=66 Identities=11% Similarity=0.167 Sum_probs=48.2
Q ss_pred CCeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecC-CCeEEEEEEEecCCCCCCchhHHHHHHHHHHH
Q 044730 107 PSLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTP-DGRVLDLFFITDGLELLHTKQRREETCEHMIA 178 (419)
Q Consensus 107 ~~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~-~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~ 178 (419)
...+.|++.|+||||+.++|++.|+++||||.++..++.. .|++.-...+..+. ...+.+++.|..
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~------~~~~~L~~~f~~ 71 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV------AGVNDFNSAFGK 71 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC---------CHHHHHHHH
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC------CCHHHHHHHHHH
Confidence 4468999999999999999999999999999999998533 67665444443221 123466666665
No 14
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.78 E-value=0.00094 Score=63.97 Aligned_cols=67 Identities=15% Similarity=0.185 Sum_probs=50.5
Q ss_pred CeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEec-CCCeEEEEEEEecCCCCCCchhHHHHHHHHHHH
Q 044730 108 SLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTT-PDGRVLDLFFITDGLELLHTKQRREETCEHMIA 178 (419)
Q Consensus 108 ~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~-~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~ 178 (419)
..+.|++.|+||||+.++|++.|+++||||.+++.++. ..|++.-.+.+.-+.. ....+.+++.|..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~----~~~~~~L~~~f~~ 72 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK----VIPLASLRTGFGV 72 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC----CCCHHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC----CCCHHHHHHHHHH
Confidence 45789999999999999999999999999999999853 3677655554543221 1236677777766
No 15
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.69 E-value=0.00055 Score=60.12 Aligned_cols=106 Identities=19% Similarity=0.142 Sum_probs=70.5
Q ss_pred CeEEEEEEe-cCCccHHHHHHHHHHhCCceEEEEEEEEe-ecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcCCC
Q 044730 248 AHTLLQIKC-ADQKGLFYDILRTSKDLNIQIAYGRISSS-VKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLHPL 325 (419)
Q Consensus 248 ~~t~v~V~~-~DrpGLl~~i~~~L~~~~~~I~~A~I~t~-t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~~~ 325 (419)
+.+.|+|.+ +|+||.++++..+|+++|+||.. |.+. +.++...=.|.+.. ...++..+.|++ +...+
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~--i~~s~~~~g~~~isf~v~~--------~~~~~a~~~l~~-~~~~l 92 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDM--IIQNVGSEGTTDFSFTVPR--------GDYKQTLEILSE-RQDSI 92 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCC--EEEC----CEEEEEEEECG--------GGHHHHHHHHHH-SSTTT
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEE--EEcCCCCCCeeEEEEEEec--------hHHHHHHHHHHH-HHHHc
Confidence 456788884 99999999999999999999998 5431 11122233466642 112223334443 22221
Q ss_pred e---eeeeCCCCCCCCCcceEEEEEeCC---CcchHHHHHHHHHhCCceEEEE
Q 044730 326 R---VMVTNRGPDTELLVANPVELCGKG---RPRVFYDVTLALKALGICIFSA 372 (419)
Q Consensus 326 ~---v~~~~~~~~~~~~~~t~lev~~~D---RpGLL~~It~~L~~~gl~I~~A 372 (419)
. +... ...+.+.|.|.+ +||+++++..+|.+.|+||...
T Consensus 93 ~~~~i~~~--------~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 93 GAASIDGD--------DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp TCSEEEEE--------SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred CCceEEec--------CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 1 1111 136789999987 9999999999999999999984
No 16
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.68 E-value=0.0013 Score=63.17 Aligned_cols=69 Identities=12% Similarity=0.195 Sum_probs=49.8
Q ss_pred CCeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEec-CCCeEEEEEEEecCCCCCCc-hhHHHHHHHHHHH
Q 044730 107 PSLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTT-PDGRVLDLFFITDGLELLHT-KQRREETCEHMIA 178 (419)
Q Consensus 107 ~~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~-~~g~~~d~f~V~~~~~~~~~-~~r~~~i~~~L~~ 178 (419)
...+.|++.|+||||+.++|++.|+++||||.+++.++. ..|++.-.+.+..+ .++ ....+.+++.|..
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~---~~~~~~~~~~L~~~f~~ 78 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHAT---DDADALRVDALRREFEP 78 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEEC---C----CCHHHHHHHHHH
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEcc---CcccCCCHHHHHHHHHH
Confidence 346789999999999999999999999999999999853 35666444444322 001 1236677777765
No 17
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.66 E-value=0.0013 Score=63.26 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=50.5
Q ss_pred CeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecC-CCeEEEEEEEecCCCCCCchhHHHHHHHHHHH
Q 044730 108 SLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTP-DGRVLDLFFITDGLELLHTKQRREETCEHMIA 178 (419)
Q Consensus 108 ~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~-~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~ 178 (419)
..+.|++.|+||||+.++|++.|+++||||.++..++.+ .|++.-.+.+..+.. ....+.+++.|..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~----~~~~~~L~~~l~~ 88 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL----PFDLDGFREAFTP 88 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS----SSCHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC----CCCHHHHHHHHHH
Confidence 467899999999999999999999999999999999743 577654444443211 1236677777765
No 18
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.66 E-value=0.0017 Score=62.16 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=50.3
Q ss_pred CCeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEec-CCCeEEEEEEEecCCCCCCchhHHHHHHHHHHH
Q 044730 107 PSLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTT-PDGRVLDLFFITDGLELLHTKQRREETCEHMIA 178 (419)
Q Consensus 107 ~~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~-~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~ 178 (419)
...+.|++.|+||||+.+.|++.|+++||||.+++.++. ..|++.-.+.+..+. ....+.+++.|..
T Consensus 6 ~~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-----~~~~~~L~~~f~~ 73 (286)
T 3n0v_A 6 PDTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-----DFDEAGFRAGLAE 73 (286)
T ss_dssp -CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-----SCCHHHHHHHHHH
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-----CCCHHHHHHHHHH
Confidence 346789999999999999999999999999999999853 356664444443321 1236778888776
No 19
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.57 E-value=0.0048 Score=53.99 Aligned_cols=114 Identities=16% Similarity=0.136 Sum_probs=75.1
Q ss_pred CCCeeEEEEEE-eCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhcccc
Q 044730 106 KPSLYLLKYCC-VDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEYS 184 (419)
Q Consensus 106 ~~~~~~i~v~~-~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~~ 184 (419)
..+...|+|.+ +|+||.+++|++.|+++|+||.--....+++|...-.|.|.. ...++..+.|++ +..+
T Consensus 22 ~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~--------~~~~~a~~~l~~-~~~~- 91 (167)
T 2re1_A 22 DKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPR--------GDYKQTLEILSE-RQDS- 91 (167)
T ss_dssp ECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECG--------GGHHHHHHHHHH-SSTT-
T ss_pred cCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEec--------hHHHHHHHHHHH-HHHH-
Confidence 34577899996 999999999999999999999865443333554333455543 112333344444 2111
Q ss_pred cchhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEecC---Ccc
Q 044730 185 ISCEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCAD---QKG 261 (419)
Q Consensus 185 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~D---rpG 261 (419)
+. ...|.+. .+.+.|.|.+.+ +||
T Consensus 92 --------------------l~-----------------------------~~~i~~~----~~~a~vsvvG~~m~~~~G 118 (167)
T 2re1_A 92 --------------------IG-----------------------------AASIDGD----DTVCKVSAVGLGMRSHVG 118 (167)
T ss_dssp --------------------TT-----------------------------CSEEEEE----SSEEEEEEECSSCTTCCC
T ss_pred --------------------cC-----------------------------CceEEec----CCEEEEEEECCCcCCCcC
Confidence 00 0012222 356789999987 999
Q ss_pred HHHHHHHHHHhCCceEEEEEEEE
Q 044730 262 LFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 262 Ll~~i~~~L~~~~~~I~~A~I~t 284 (419)
+++++..+|++.|+||.. +.+
T Consensus 119 v~a~i~~aL~~~~InI~~--ist 139 (167)
T 2re1_A 119 VAAKIFRTLAEEGINIQM--IST 139 (167)
T ss_dssp HHHHHHHHHHHTTCCCCE--EEE
T ss_pred HHHHHHHHHHHCCCcEEE--EEc
Confidence 999999999999999998 554
No 20
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.49 E-value=0.003 Score=55.34 Aligned_cols=122 Identities=16% Similarity=0.164 Sum_probs=78.4
Q ss_pred CeEEEEEEe-cCCccHHHHHHHHHHhCCceEEEEEEEEeec---CceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcC
Q 044730 248 AHTLLQIKC-ADQKGLFYDILRTSKDLNIQIAYGRISSSVK---GYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLH 323 (419)
Q Consensus 248 ~~t~v~V~~-~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~---g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~ 323 (419)
+.+.|+|.+ +|+||.++++..+|++.|+||.. |.+... .+...=.|.+..+ +..+..++.+.+...+.-
T Consensus 15 ~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~--I~q~~~~~~~g~~~isf~V~~~-----d~~~a~~~L~~~~~~~~~ 87 (167)
T 2dt9_A 15 DHAQIGLIGIPDQPGIAAKVFQALAERGIAVDM--IIQGVPGHDPSRQQMAFTVKKD-----FAQEALEALEPVLAEIGG 87 (167)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSC--EEBCCCCSCTTEEEEEEEEEGG-----GHHHHHHHHHHHHHHHCC
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEE--EEcCCCCCCCCceEEEEEEehH-----HHHHHHHHHHHHHHHhCC
Confidence 566777776 89999999999999999999998 654111 1123334666521 111222222334334432
Q ss_pred CCeeeeeCCCCCCCCCcceEEEEEeCC---CcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecC
Q 044730 324 PLRVMVTNRGPDTELLVANPVELCGKG---RPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDES 394 (419)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~t~lev~~~D---RpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~ 394 (419)
.+.+.. ....+.|.|.+ +||+++++.++|.+.|+||... +|- . ..-.|.|...
T Consensus 88 --~v~~~~--------~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i--s~S----e--~~is~vv~~~ 143 (167)
T 2dt9_A 88 --EAILRP--------DIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI--ATS----E--VRISVIIPAE 143 (167)
T ss_dssp --EEEEEC--------SEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE--EEC----S--SEEEEEEEGG
T ss_pred --cEEEeC--------CEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE--Ecc----C--CEEEEEEeHH
Confidence 333221 25689999987 9999999999999999999654 341 1 3455666543
No 21
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.40 E-value=0.18 Score=52.96 Aligned_cols=289 Identities=15% Similarity=0.153 Sum_probs=159.6
Q ss_pred CCCeEEEEeC-CCCCchhHHHHHHHHhcCeEEEEEEeee-CCCeEEEEEEEEcCCCCCCCCHHHHHHHHHhhCCCCcc-c
Q 044730 18 TEPSVVTVNC-PDKNGLGCDLCRIILEFGLFIVRGDFST-DGRWCYIVLWVVPDASSDKVDWESLKNRLLSVCPSILV-S 94 (419)
Q Consensus 18 ~~~t~v~v~~-~dk~Gll~d~~~~l~d~~l~I~k~~ist-dg~w~~dvf~v~~~~g~~~~~~~~~~~~~~~~~~~~~~-~ 94 (419)
.+.+.|++.. ++++|.+..+-+.|.+.+++|---.-|+ .++-.-..|.| +.+.. +.....++++.+.... .
T Consensus 268 ~~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv-~~~~~-----~~a~~~l~~~~~el~~~~ 341 (600)
T 3l76_A 268 ADQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTV-VKDLL-----NTAEAVTSAIAPALRSYP 341 (600)
T ss_dssp CCCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEE-CGGGH-----HHHHHHHHHHGGGGSSST
T ss_pred CCEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEE-eHHHH-----HHHHHHHHHHHHHhhccc
Confidence 4556666653 6899999999999999999985544443 33322233444 33221 2233333332211000 0
Q ss_pred cccCCCCCCCCCCCeeEEEEEEe---CCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHH
Q 044730 95 YYFNQPSSNSSKPSLYLLKYCCV---DRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREE 171 (419)
Q Consensus 95 ~~~~~~~v~~~~~~~~~i~v~~~---DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~ 171 (419)
.......+ ....+...|.++|. .+||..+++..+|++.++||.--. |+ +-.. .|.|.. +..++
T Consensus 342 ~~~~~~~v-~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~~I--s~vI~~--------~d~~~ 407 (600)
T 3l76_A 342 EADQEAEI-IVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EVKV--SCVIDQ--------RDADR 407 (600)
T ss_dssp TCSSSSEE-EEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SSEE--EEEEEG--------GGHHH
T ss_pred cccCccee-EecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CCEE--EEEEcH--------HHHHH
Confidence 00000000 12355789999986 799999999999999999997543 43 2222 233432 23333
Q ss_pred HHHHHHHHhcccccchhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEE
Q 044730 172 TCEHMIAVLGEYSISCEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTL 251 (419)
Q Consensus 172 i~~~L~~vL~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~ 251 (419)
.-+.|.+.+.... ++.... +...+ . ..=.-|..+ .+.+.
T Consensus 408 Av~aLh~~f~~~~------------------t~~~~~--------~~~~~--------~---~~v~Gia~~----~~~a~ 446 (600)
T 3l76_A 408 AIAALSNAFGVTL------------------SPPKNQ--------TDTSH--------L---PAVRGVALD----QDQAQ 446 (600)
T ss_dssp HHHHHHHHTTCCB------------------CCCCCC--------CC-----------C---CSCCEEEEE----CSEEE
T ss_pred HHHHHHHhhcccC------------------CCcccc--------ccccc--------c---CceEEEEee----CCEEE
Confidence 4445555443210 000000 00000 0 011234433 24556
Q ss_pred EEEE-ecCCccHHHHHHHHHHhCCceEEEEEEEEee-c---Cc--eeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcCC
Q 044730 252 LQIK-CADQKGLFYDILRTSKDLNIQIAYGRISSSV-K---GY--RNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLHP 324 (419)
Q Consensus 252 v~V~-~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t-~---g~--~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~~ 324 (419)
|+|. .+|+||+.++|...|++.|+||.- |.... . .+ ...=.|.+. .+..++..+.|++ +...
T Consensus 447 i~i~~~~~~~g~~~~if~~La~~~I~vDm--I~q~~~~~~~~g~~~~~isftv~--------~~d~~~a~~~l~~-~~~~ 515 (600)
T 3l76_A 447 IAIRHVPDRPGMAAQLFTALAEANISVDM--IIQSQRCRINQGTPCRDIAFMVA--------EGDSSQAEAILQP-LIKD 515 (600)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCCCE--EEEEEECCCSSSSCEEEEEEEEE--------HHHHHHHHHHHHH-HTTT
T ss_pred EEEecCCCCccHHHHHHHHHHHcCCcEEE--EEecccccccCCCccceEEEEEe--------HHHHHHHHHHHHH-HHHh
Confidence 6665 489999999999999999999965 43311 1 12 223346664 1223333333433 2221
Q ss_pred ---CeeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecC
Q 044730 325 ---LRVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDES 394 (419)
Q Consensus 325 ---~~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~ 394 (419)
..+.+.. ....|.+.|. .+||+-+++.++|.+.||||.... |-. ..-.|.|...
T Consensus 516 ~~~~~v~~~~--------~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis--tSE------i~Is~vV~~~ 575 (600)
T 3l76_A 516 WLDAAIVVNK--------AIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA--TSE------IKISCVVPQD 575 (600)
T ss_dssp STTCEEEEEC--------CEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE--ECS------SEEEEEEEGG
T ss_pred cCCceEEEeC--------CeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE--cCC------ceEEEEEeHH
Confidence 1232221 2568888874 899999999999999999998755 411 4556667543
No 22
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.37 E-value=0.0041 Score=55.12 Aligned_cols=106 Identities=18% Similarity=0.158 Sum_probs=69.2
Q ss_pred CeEEEEEE-ecCCccHHHHHHHHHHhCCceEEEEEEEEeec---CceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcC
Q 044730 248 AHTLLQIK-CADQKGLFYDILRTSKDLNIQIAYGRISSSVK---GYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLH 323 (419)
Q Consensus 248 ~~t~v~V~-~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~---g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~ 323 (419)
+.+.|+|. .+|+||.++++...|++.|+||.. |.+.+. ++...=.|.+.. ...++..+.|++ +..
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~--i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~~ 82 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDM--VLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQV 82 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCE--EEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TTT
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEE--EEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HHH
Confidence 45677774 589999999999999999999987 543211 112221266542 122333344443 212
Q ss_pred CC---eeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 044730 324 PL---RVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSA 372 (419)
Q Consensus 324 ~~---~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A 372 (419)
.. .+.+. .....|.|.|. ++||+++++.++|.+.|+||...
T Consensus 83 ~~~~~~v~~~--------~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~i 129 (178)
T 2dtj_A 83 QGNWTNVLYD--------DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 129 (178)
T ss_dssp TTTCSEEEEE--------SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred hcCCCeEEEe--------CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 11 12111 12568889887 89999999999999999999884
No 23
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.35 E-value=0.00083 Score=58.90 Aligned_cols=65 Identities=12% Similarity=0.130 Sum_probs=52.7
Q ss_pred eeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCC-CeEEEEEEEecCCCCCCchhHHHHHHHHHHHH
Q 044730 109 LYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPD-GRVLDLFFITDGLELLHTKQRREETCEHMIAV 179 (419)
Q Consensus 109 ~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~-g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~v 179 (419)
...|++...|+||+|++|+++|++.|+||.+..+.++.+ |..--.|.|.. +...++++.++|.++
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~------d~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG------DEKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec------cHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999987665 66655566652 256678888888873
No 24
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.20 E-value=0.018 Score=54.98 Aligned_cols=112 Identities=10% Similarity=0.083 Sum_probs=66.2
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhc-CCCee
Q 044730 249 HTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEML-HPLRV 327 (419)
Q Consensus 249 ~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~-~~~~v 327 (419)
.++++|.|+|||||++.|+.+|+++|+||.+.+-++....+.+.-...+....... ..+.|++.|...-+ -....
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~----~~~~L~~~f~~la~~~~m~~ 81 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVI----PLASLRTGFGVIAAKFTMGW 81 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCC----CHHHHHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCC----CHHHHHHHHHHHHHHcCCEE
Confidence 46899999999999999999999999999997766422233322111222121111 24556666653221 12233
Q ss_pred eeeCCCCCCCCCcceEEEEEeCCCcchHHHHHHHHHhCCceEE
Q 044730 328 MVTNRGPDTELLVANPVELCGKGRPRVFYDVTLALKALGICIF 370 (419)
Q Consensus 328 ~~~~~~~~~~~~~~t~lev~~~DRpGLL~~It~~L~~~gl~I~ 370 (419)
.+..... ...|=|....+---|.++-...+.-.++..
T Consensus 82 ~l~~~~~------~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~ 118 (288)
T 3obi_A 82 HMRDRET------RRKVMLLVSQSDHCLADILYRWRVGDLHMI 118 (288)
T ss_dssp EEEETTS------CEEEEEEECSCCHHHHHHHHHHHTTSSCEE
T ss_pred EeeccCC------CcEEEEEEcCCCCCHHHHHHHHHCCCCCeE
Confidence 3332211 224556666666677777777776666543
No 25
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.16 E-value=0.035 Score=58.49 Aligned_cols=198 Identities=12% Similarity=0.062 Sum_probs=115.0
Q ss_pred CeeEEEEEE-eCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhcccccc
Q 044730 108 SLYLLKYCC-VDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEYSIS 186 (419)
Q Consensus 108 ~~~~i~v~~-~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~~~~ 186 (419)
+.+.|++.+ +++||.+++|...|+++++||.--......+|..--.|.|.. +.+++..+.|++ +..+
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~--------~~~~~a~~~l~~-~~~e--- 336 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVK--------DLLNTAEAVTSA-IAPA--- 336 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECG--------GGHHHHHHHHHH-HGGG---
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeH--------HHHHHHHHHHHH-HHHH---
Confidence 345666665 799999999999999999999533222223454433455543 123334444444 2221
Q ss_pred hhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEec---CCccHH
Q 044730 187 CEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCA---DQKGLF 263 (419)
Q Consensus 187 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---DrpGLl 263 (419)
+.- + .+ .. ....|.+. .+...|.|.+. .+||+.
T Consensus 337 --l~~-~-----------~~-----------------------~~---~~~~v~~~----~~~a~VsvVG~gm~~~~Gv~ 372 (600)
T 3l76_A 337 --LRS-Y-----------PE-----------------------AD---QEAEIIVE----KGIAKIAIAGAGMIGRPGIA 372 (600)
T ss_dssp --GSS-S-----------TT-----------------------CS---SSSEEEEE----CSEEEEEEECGGGTTCTTHH
T ss_pred --hhc-c-----------cc-----------------------cc---CcceeEec----CCeEEEEEECCCcccCccHH
Confidence 000 0 00 00 11234433 25678999986 799999
Q ss_pred HHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcCCCeeeeeCCCCC--------
Q 044730 264 YDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLHPLRVMVTNRGPD-------- 335 (419)
Q Consensus 264 ~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~~~~v~~~~~~~~-------- 335 (419)
+++..+|++.++||.. |++ + +. --.|.+.. +..++..+.|.+.+............+.
T Consensus 373 a~if~aL~~~~Ini~~--ist-S--e~-~Is~vI~~--------~d~~~Av~aLh~~f~~~~t~~~~~~~~~~~~~v~Gi 438 (600)
T 3l76_A 373 AKMFKTLADVGVNIEM--IST-S--EV-KVSCVIDQ--------RDADRAIAALSNAFGVTLSPPKNQTDTSHLPAVRGV 438 (600)
T ss_dssp HHHHHHHHHTTCCCCE--EEE-C--SS-EEEEEEEG--------GGHHHHHHHHHHHTTCCBCCCCCCCC---CCSCCEE
T ss_pred HHHHHHHHhCCCcEEE--Eec-C--CC-EEEEEEcH--------HHHHHHHHHHHHhhcccCCCccccccccccCceEEE
Confidence 9999999999999987 554 2 21 22355541 2344455666666643210000000000
Q ss_pred CCCCcceEEEEEe-CCCcchHHHHHHHHHhCCceEEEEEEe
Q 044730 336 TELLVANPVELCG-KGRPRVFYDVTLALKALGICIFSAEIG 375 (419)
Q Consensus 336 ~~~~~~t~lev~~-~DRpGLL~~It~~L~~~gl~I~~A~I~ 375 (419)
......+.|.|.. +|+||+.++|-..|.+.||+|....-+
T Consensus 439 a~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~ 479 (600)
T 3l76_A 439 ALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQS 479 (600)
T ss_dssp EEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEE
T ss_pred EeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEec
Confidence 0012345666644 799999999999999999999655443
No 26
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.15 E-value=0.0016 Score=57.05 Aligned_cols=65 Identities=11% Similarity=0.039 Sum_probs=49.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHHHHHHHHHHHHH
Q 044730 342 NPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQARNRIVEKVKKT 415 (419)
Q Consensus 342 t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~~~~i~~~l~~~ 415 (419)
..|+|...||||+|++|+.+|++.|+||.+..+.+ ..+.....-+|-+. | +.+..++|..+|++.
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~--t~d~~~sriti~V~---~----d~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAP--TDDPTLSRMTIQTV---G----DEKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEE--CSCSSEEEEEEEEE---S----CHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeee--cCCCCEEEEEEEEe---c----cHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999976 22322255556564 2 255668888888764
No 27
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.13 E-value=0.0019 Score=56.60 Aligned_cols=65 Identities=11% Similarity=0.154 Sum_probs=52.4
Q ss_pred eeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCC-CeEEEEEEEecCCCCCCchhHHHHHHHHHHHH
Q 044730 109 LYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPD-GRVLDLFFITDGLELLHTKQRREETCEHMIAV 179 (419)
Q Consensus 109 ~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~-g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~v 179 (419)
...|.+...|+||+|++|+++|++.|+||.+..+.++.+ |..--.|.|.. +...++++.++|.++
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~------d~~~leql~kQL~Kl 69 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG------PDEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec------cHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999987664 66655566653 255678888888873
No 28
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.01 E-value=0.002 Score=56.46 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=49.7
Q ss_pred eEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHHHHHHHHHHHHHH
Q 044730 342 NPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQARNRIVEKVKKTL 416 (419)
Q Consensus 342 t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~~~~i~~~l~~~l 416 (419)
..+.|...||||+|++|+.+|+++|+||.+..+.... +.....-+|-+. | ++...++|.++|.+..
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~--d~g~sritivV~---~----d~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTE--DPTLSRMTLVTN---G----PDEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECS--STTEEEEEEEEE---E----CHHHHHHHHHHHHHST
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecC--CCCEEEEEEEEe---c----cHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999999997622 322245555554 2 1456678888887643
No 29
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=96.99 E-value=0.021 Score=54.85 Aligned_cols=36 Identities=22% Similarity=0.181 Sum_probs=33.0
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEE
Q 044730 249 HTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 249 ~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t 284 (419)
.++++|.|+|||||++.|+.+|+++|+||.++.-+.
T Consensus 22 ~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~ 57 (302)
T 3o1l_A 22 TFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHS 57 (302)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEe
Confidence 468999999999999999999999999999977664
No 30
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.97 E-value=0.036 Score=52.82 Aligned_cols=36 Identities=11% Similarity=0.053 Sum_probs=32.8
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEE
Q 044730 249 HTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 249 ~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t 284 (419)
.++++|.|+|||||++.|+.+|+++|+||.+.+-++
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~ 43 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFD 43 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeec
Confidence 468999999999999999999999999999977664
No 31
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.95 E-value=0.037 Score=52.78 Aligned_cols=109 Identities=8% Similarity=0.008 Sum_probs=64.2
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEe--cCCCCCCCHHHHHHHHHHHHHHhc-CC
Q 044730 248 AHTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQ--TDGKKVVDPKQQTALCFHLKEEML-HP 324 (419)
Q Consensus 248 ~~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~--~~g~~i~~~~~~~~l~~~L~~al~-~~ 324 (419)
..++++|.|+|||||++.|+.+|+++|+||.++.-++....+ .|.+. -+.... ..+.|++.|...-+ -.
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g----~Ffmr~~~~~~~~----~~~~L~~~f~~la~~~~ 77 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSS----KFFMRVSVEIPVA----GVNDFNSAFGKVVEKYN 77 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTT----EEEEEEEEECCC-------CHHHHHHHHHHGGGT
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCC----eEEEEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999997766322223 23332 222111 12356666654322 12
Q ss_pred CeeeeeCCCCCCCCCcceEEEEEeCCCcchHHHHHHHHHhCCceEE
Q 044730 325 LRVMVTNRGPDTELLVANPVELCGKGRPRVFYDVTLALKALGICIF 370 (419)
Q Consensus 325 ~~v~~~~~~~~~~~~~~t~lev~~~DRpGLL~~It~~L~~~gl~I~ 370 (419)
....+..... ...|=|....+---|.++-...+.-.++..
T Consensus 78 m~~~l~~~~~------~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~ 117 (287)
T 3nrb_A 78 AEWWFRPRTD------RKKVVIMVSKFDHCLGDLLYRHRLGELDME 117 (287)
T ss_dssp CEEEEEETTC------CCEEEEEECSCCHHHHHHHHHHHHTSSCCE
T ss_pred CeeEeeccCC------CcEEEEEEeCCCcCHHHHHHHHHCCCCCeE
Confidence 2333332211 124555555555677777777776666543
No 32
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.89 E-value=0.09 Score=46.55 Aligned_cols=113 Identities=15% Similarity=0.136 Sum_probs=72.7
Q ss_pred CCeeEEEEEE-eCCCChHHHHHHHHHHcCCeEEEEEEEecC--CCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhccc
Q 044730 107 PSLYLLKYCC-VDRKGLLHDATKVLTELEFTIQRVKVMTTP--DGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEY 183 (419)
Q Consensus 107 ~~~~~i~v~~-~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~--~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~ 183 (419)
.+.+.|+|.+ +|+||.+++|...|++.|+||.--...... +|..--.|.|... + .++..+.|++ +..+
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~-----~---~~~a~~~L~~-~~~e 84 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-----V---GPAAVEKLDS-LRNE 84 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT-----T---HHHHHHHHHH-THHH
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh-----H---HHHHHHHHHH-HHHh
Confidence 4566777765 799999999999999999999743322222 4554445666542 1 2223333333 1111
Q ss_pred ccchhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEec---CCc
Q 044730 184 SISCEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCA---DQK 260 (419)
Q Consensus 184 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---Drp 260 (419)
+. ...|.++ .+...|.|.|. ++|
T Consensus 85 -----l~---------------------------------------------~~~v~~~----~~va~VsvVG~gm~~~~ 110 (181)
T 3s1t_A 85 -----IG---------------------------------------------FSQLLYD----DHIGKVSLIGAGMRSHP 110 (181)
T ss_dssp -----HC---------------------------------------------CSEEEEE----SCEEEEEEEEECCTTCH
T ss_pred -----cC---------------------------------------------cceEEEe----CCEEEEEEEecccccCc
Confidence 00 0012222 24567888875 899
Q ss_pred cHHHHHHHHHHhCCceEEEEEEEE
Q 044730 261 GLFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 261 GLl~~i~~~L~~~~~~I~~A~I~t 284 (419)
|+.+++..+|++.|+||.. |++
T Consensus 111 Gvaa~~f~aLa~~~InI~~--Ist 132 (181)
T 3s1t_A 111 GVTATFCEALAAVGVNIEL--IST 132 (181)
T ss_dssp HHHHHHHHHHHHTTCCCCE--EEE
T ss_pred hHHHHHHHHHHHCCCcEEE--EEc
Confidence 9999999999999999998 555
No 33
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.79 E-value=0.044 Score=52.36 Aligned_cols=36 Identities=8% Similarity=0.137 Sum_probs=33.0
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEE
Q 044730 249 HTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 249 ~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t 284 (419)
.+++++.|+|||||+++|+.+|+++|+||.+++-++
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~ 45 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFD 45 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEe
Confidence 468999999999999999999999999999977664
No 34
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.78 E-value=0.02 Score=49.89 Aligned_cols=110 Identities=10% Similarity=0.060 Sum_probs=71.5
Q ss_pred CCCeeEEEEEE-eCCCChHHHHHHHHHHcCCeEEEEEEEecC--CCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhcc
Q 044730 106 KPSLYLLKYCC-VDRKGLLHDATKVLTELEFTIQRVKVMTTP--DGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGE 182 (419)
Q Consensus 106 ~~~~~~i~v~~-~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~--~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~ 182 (419)
..+...|++.+ +|+||.++++.+.|++.|+||.--....+. +|..--.|.|... + .++..+.|.+ +..
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~-----d---~~~a~~~L~~-~~~ 83 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD-----F---AQEALEALEP-VLA 83 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG-----G---HHHHHHHHHH-HHH
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH-----H---HHHHHHHHHH-HHH
Confidence 34677888888 899999999999999999999864332211 2333334555431 1 2223333433 211
Q ss_pred cccchhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEecC---C
Q 044730 183 YSISCEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCAD---Q 259 (419)
Q Consensus 183 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~D---r 259 (419)
+. . . .+.++ .+...|.|.|.+ +
T Consensus 84 ~~-----~--------------------------------------------~--~v~~~----~~~a~vsvVG~gm~~~ 108 (167)
T 2dt9_A 84 EI-----G--------------------------------------------G--EAILR----PDIAKVSIVGVGLAST 108 (167)
T ss_dssp HH-----C--------------------------------------------C--EEEEE----CSEEEEEEEESSGGGS
T ss_pred Hh-----C--------------------------------------------C--cEEEe----CCEEEEEEECCCcccC
Confidence 10 0 0 12222 246688999876 9
Q ss_pred ccHHHHHHHHHHhCCceEEE
Q 044730 260 KGLFYDILRTSKDLNIQIAY 279 (419)
Q Consensus 260 pGLl~~i~~~L~~~~~~I~~ 279 (419)
||+++++..+|++.|+||..
T Consensus 109 ~Gv~a~~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 109 PEVPAKMFQAVASTGANIEM 128 (167)
T ss_dssp THHHHHHHHHHHHTTCCCCE
T ss_pred cCHHHHHHHHHHHCCCCEEE
Confidence 99999999999999999965
No 35
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.73 E-value=0.031 Score=49.33 Aligned_cols=113 Identities=18% Similarity=0.167 Sum_probs=72.5
Q ss_pred CCeeEEEEE-EeCCCChHHHHHHHHHHcCCeEEEEEEEecC--CCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhccc
Q 044730 107 PSLYLLKYC-CVDRKGLLHDATKVLTELEFTIQRVKVMTTP--DGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEY 183 (419)
Q Consensus 107 ~~~~~i~v~-~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~--~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~ 183 (419)
.+.+.|+|. .+|+||.+++|+..|++.|+||.---..+.. +|..--.|.+.. +..++..+.|++ +..+
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HHHh
Confidence 456788884 5899999999999999999999865444321 332211255542 222333333433 2111
Q ss_pred ccchhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEec---CCc
Q 044730 184 SISCEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCA---DQK 260 (419)
Q Consensus 184 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---Drp 260 (419)
+. ...+.+. .+...|.|.|. ++|
T Consensus 84 ---------------------~~-----------------------------~~~v~~~----~~~a~VsvVG~gm~~~~ 109 (178)
T 2dtj_A 84 ---------------------GN-----------------------------WTNVLYD----DQVGKVSLVGAGMKSHP 109 (178)
T ss_dssp ---------------------TT-----------------------------CSEEEEE----SCEEEEEEEEECCTTCH
T ss_pred ---------------------cC-----------------------------CCeEEEe----CCeEEEEEEcCCcccCc
Confidence 00 0112222 24567888886 899
Q ss_pred cHHHHHHHHHHhCCceEEEEEEEE
Q 044730 261 GLFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 261 GLl~~i~~~L~~~~~~I~~A~I~t 284 (419)
|+++++..+|++.|+||.. |.+
T Consensus 110 Gv~arif~aLa~~~InI~~--ist 131 (178)
T 2dtj_A 110 GVTAEFMEALRDVNVNIEL--IST 131 (178)
T ss_dssp HHHHHHHHHHHHTTCCCCE--EEE
T ss_pred cHHHHHHHHHHHCCCCEEE--EEc
Confidence 9999999999999999988 554
No 36
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.62 E-value=0.089 Score=46.56 Aligned_cols=123 Identities=18% Similarity=0.166 Sum_probs=76.9
Q ss_pred CeEEEEEE-ecCCccHHHHHHHHHHhCCceEEEEEEEEe-ec--CceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcC
Q 044730 248 AHTLLQIK-CADQKGLFYDILRTSKDLNIQIAYGRISSS-VK--GYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLH 323 (419)
Q Consensus 248 ~~t~v~V~-~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~-t~--g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~ 323 (419)
+.+.|+|. -+|+||.+++|..+|++.|+||.. |.+. +. .+...-.|.+..+ +..+..++.+.+...+.
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~--I~q~~s~~~~g~~~isftv~~~-----~~~~a~~~L~~~~~el~- 86 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDM--VLQNVSKVEDGKTDITFTCSRD-----VGPAAVEKLDSLRNEIG- 86 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCC--EEECCCCTTTCEEEEEEEEETT-----THHHHHHHHHHTHHHHC-
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEE--EEecCCcccCCccEEEEEEehh-----HHHHHHHHHHHHHHhcC-
Confidence 34455554 479999999999999999999987 5531 11 2333445676522 11122222223333331
Q ss_pred CCeeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecC
Q 044730 324 PLRVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDES 394 (419)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~ 394 (419)
...+.+.. ....+.+.|. ++||+.+++.++|.+.|+||.... |- + ..-.|.|...
T Consensus 87 ~~~v~~~~--------~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is--tS---e---i~Is~vV~~~ 144 (181)
T 3s1t_A 87 FSQLLYDD--------HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS---E---IRISVLCRDT 144 (181)
T ss_dssp CSEEEEES--------CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EE---T---TEEEEEEEGG
T ss_pred cceEEEeC--------CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE--cC---C---CEEEEEEeHH
Confidence 22232221 2567888877 899999999999999999998866 31 1 4455777643
No 37
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.46 E-value=0.0057 Score=55.60 Aligned_cols=62 Identities=24% Similarity=0.303 Sum_probs=43.6
Q ss_pred eeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecC----CCeEEEEEEEecCCCCCCchhHHHHHHHHHHH
Q 044730 109 LYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTP----DGRVLDLFFITDGLELLHTKQRREETCEHMIA 178 (419)
Q Consensus 109 ~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~----~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~ 178 (419)
...|.+.+.||||+|++|+.+|++++.||...+..+.. +|.+.-.+.+.+. .++++-+.|++
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~--------~Le~LL~kLrk 69 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG--------DFEKILERVKT 69 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSS--------CHHHHHHHHHT
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCC--------CHHHHHHHHhC
Confidence 46899999999999999999999999999999999865 5665444444431 25555555554
No 38
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.45 E-value=0.0049 Score=56.02 Aligned_cols=52 Identities=13% Similarity=0.075 Sum_probs=36.7
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCC-ceeEEEEEEEe
Q 044730 341 ANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSH-RQWEVYRFLLD 392 (419)
Q Consensus 341 ~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge-~~~~~d~F~v~ 392 (419)
...|++.+.||||+|++|+.+|+++++||......+...|+ ...+.-.|-+.
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~ 56 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIE 56 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEEC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEEC
Confidence 45799999999999999999999999999999998855444 22233334444
No 39
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.41 E-value=0.014 Score=52.28 Aligned_cols=67 Identities=10% Similarity=0.214 Sum_probs=51.8
Q ss_pred CeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCC-CeEEEEEEEecCCCCCCchhHHHHHHHHHHHHh
Q 044730 108 SLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPD-GRVLDLFFITDGLELLHTKQRREETCEHMIAVL 180 (419)
Q Consensus 108 ~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~-g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL 180 (419)
....|.+...|+||.|++|+++|+..|+||.+-.+..+.+ |..--++.|..+ ...+++|.++|.++.
T Consensus 28 m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 28 REHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTST
T ss_pred eEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCcC
Confidence 3578999999999999999999999999999988875555 655445666542 345777888877643
No 40
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.29 E-value=0.011 Score=52.78 Aligned_cols=67 Identities=15% Similarity=0.208 Sum_probs=47.3
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHHHHHHHHHHHHHH
Q 044730 341 ANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQARNRIVEKVKKTL 416 (419)
Q Consensus 341 ~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~~~~i~~~l~~~l 416 (419)
...|.|...|+||.|++|+.+|++.|+||.+..+.. ..+.....-+|.|.+. +...++|..+|.+.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~--ted~gisRitIvV~g~-------e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGE--SETPGLSRLVIMVKGD-------DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEE--CSSTTEEEEEEEEEEC-------TTHHHHHHHHHTTST
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeec--cCCCCEEEEEEEEECC-------HHHHHHHHHHhcCcC
Confidence 357999999999999999999999999999998874 2232113344455422 233467777776643
No 41
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.23 E-value=0.076 Score=47.86 Aligned_cols=115 Identities=14% Similarity=0.131 Sum_probs=71.3
Q ss_pred CCCCeeEEEEEE-eCCCChHHHHHHHHHHcCCeEEEEEEEec--CCCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhc
Q 044730 105 SKPSLYLLKYCC-VDRKGLLHDATKVLTELEFTIQRVKVMTT--PDGRVLDLFFITDGLELLHTKQRREETCEHMIAVLG 181 (419)
Q Consensus 105 ~~~~~~~i~v~~-~DrpGLl~~i~~vL~~~g~nI~~A~i~T~--~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~ 181 (419)
...+...|++.+ +|+||..++|.+.|++.|+||----...+ .++..--.|.+.. +..++..+.|.+ +.
T Consensus 31 ~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~--------~d~~~~~~~l~~-~~ 101 (200)
T 4go7_X 31 HDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSR--------DVGPAAVEKLDS-LR 101 (200)
T ss_dssp EECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEG--------GGHHHHHHHHHT-TH
T ss_pred ccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecch--------hhHHHHHHHHHH-HH
Confidence 345577888886 89999999999999999999974322211 1334444465543 122223333332 11
Q ss_pred ccccchhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEe---cC
Q 044730 182 EYSISCEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKC---AD 258 (419)
Q Consensus 182 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~---~D 258 (419)
.. +. ...|.+++ +...|.|.+ +.
T Consensus 102 ~~-----~~---------------------------------------------~~~v~~~~----~iakVSvVG~GM~~ 127 (200)
T 4go7_X 102 NE-----IG---------------------------------------------FSQLLYDD----HIGKVSLIGAGMRS 127 (200)
T ss_dssp HH-----HC---------------------------------------------CSEEEEEC----CEEEEEEEEESCTT
T ss_pred hh-----hc---------------------------------------------eeeEEEec----Ceeeeeeecccccc
Confidence 10 00 00122221 344566665 78
Q ss_pred CccHHHHHHHHHHhCCceEEEEEEEE
Q 044730 259 QKGLFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 259 rpGLl~~i~~~L~~~~~~I~~A~I~t 284 (419)
+||+.+++..+|++.|+||.- |+|
T Consensus 128 ~~GVaak~F~aLa~~~INI~m--Ist 151 (200)
T 4go7_X 128 HPGVTATFCEALAAVGVNIEL--IST 151 (200)
T ss_dssp CHHHHHHHHHHHHHTTCCCCE--EEE
T ss_pred CCCcHHHHHHHHHHCCCCEEE--EEc
Confidence 999999999999999999998 665
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.89 E-value=0.22 Score=44.77 Aligned_cols=124 Identities=18% Similarity=0.175 Sum_probs=77.4
Q ss_pred CCeEEEEEE-ecCCccHHHHHHHHHHhCCceEEEEEEEEeec---CceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhc
Q 044730 247 PAHTLLQIK-CADQKGLFYDILRTSKDLNIQIAYGRISSSVK---GYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEML 322 (419)
Q Consensus 247 ~~~t~v~V~-~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~---g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~ 322 (419)
++.+.|+|. .+|+||+.++|..+|++.|+||-. |.+... .....-.|.+..+ +..+...+.+.+...+.
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDm--I~Qs~s~~~~~~~~~sftv~~~-----d~~~~~~~l~~~~~~~~ 105 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDM--VLQNVSKVEDGKTDITFTCSRD-----VGPAAVEKLDSLRNEIG 105 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCC--EECCCCC--CCEEEEEEEEEGG-----GHHHHHHHHHTTHHHHC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEE--EeeccccccccceEEEEecchh-----hHHHHHHHHHHHHhhhc
Confidence 356677776 489999999999999999999988 654211 1233335666421 11122223333333332
Q ss_pred CCCeeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecC
Q 044730 323 HPLRVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDES 394 (419)
Q Consensus 323 ~~~~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~ 394 (419)
. ..+.+.. ....|.+.|. .+||+.+++.++|.+.|+||.... |- | ..-.|.|.+.
T Consensus 106 ~-~~v~~~~--------~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs--tS---E---i~IS~vV~~~ 163 (200)
T 4go7_X 106 F-SQLLYDD--------HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS---E---IRISVLCRDT 163 (200)
T ss_dssp C-SEEEEEC--------CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE--EC---S---SEEEEEEEGG
T ss_pred e-eeEEEec--------CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE--cc---C---CEEEEEEeHH
Confidence 1 1222221 2446777765 789999999999999999998764 41 2 4556767543
No 43
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.86 E-value=0.032 Score=48.39 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=43.6
Q ss_pred EEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHH
Q 044730 111 LLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIA 178 (419)
Q Consensus 111 ~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~ 178 (419)
.|+|.|.||+||+++|+.+|++.+.||..+.+.+ +|. +++.-+. .+.+-+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~--~g~----i~~~~~~---~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP--IGR----IYLNFAE---LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET--TTE----EEEEECC---CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec--CCE----EEEEEEe---CCHHHHHHHHHHHHc
Confidence 5889999999999999999999999999999976 365 3333221 234445666666655
No 44
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.84 E-value=0.01 Score=51.65 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=32.4
Q ss_pred EEEEEeCCCcchHHHHHHHHHhCCceEEEEEEee
Q 044730 343 PVELCGKGRPRVFYDVTLALKALGICIFSAEIGR 376 (419)
Q Consensus 343 ~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T 376 (419)
.|+|.+.||+|||++|+.+|.+.++||..+++.+
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~ 35 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP 35 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec
Confidence 4899999999999999999999999999999977
No 45
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.66 E-value=0.31 Score=48.84 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=70.2
Q ss_pred CeEEEEEE-ecCCccHHHHHHHHHHhCCceEEEEEEEEe-ec--CceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcC
Q 044730 248 AHTLLQIK-CADQKGLFYDILRTSKDLNIQIAYGRISSS-VK--GYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLH 323 (419)
Q Consensus 248 ~~t~v~V~-~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~-t~--g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~ 323 (419)
+.+.|+|. .+|+||.++++...|+++|+||.. |... +. .+...=.|.+..+ +..+..++.+.+...+..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~--I~q~~s~~~~g~~~isf~v~~~-----~~~~a~~~l~~~~~~~~~ 335 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDM--VLQNVFSVEDGTTDITFTCPRS-----DGRRAMEILKKLQVQGNW 335 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEE--EEECCCC--CCEEEEEEEEETT-----THHHHHHHHHHHHTTTTC
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEE--EEccCccccCCcceEEEEEech-----hHHHHHHHHHHHHHHcCC
Confidence 56678887 589999999999999999999998 5321 11 1223334666521 222222222223222221
Q ss_pred CCeeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 044730 324 PLRVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSA 372 (419)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A 372 (419)
..+.+.. ....+.|.|. ++||+++++..+|.+.||||...
T Consensus 336 -~~v~~~~--------~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 336 -TNVLYDD--------QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp -SEEEEEC--------CEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred -ceEEEeC--------CeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 1222211 2557888886 79999999999999999999854
No 46
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.50 E-value=0.93 Score=45.31 Aligned_cols=137 Identities=18% Similarity=0.185 Sum_probs=83.7
Q ss_pred CeeEEEEE-EeCCCChHHHHHHHHHHcCCeEEEEEEEecC--CCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhcccc
Q 044730 108 SLYLLKYC-CVDRKGLLHDATKVLTELEFTIQRVKVMTTP--DGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEYS 184 (419)
Q Consensus 108 ~~~~i~v~-~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~--~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~~ 184 (419)
+.+.|+|. .+|+||.+++|.+.|+++|+||.--...|+. +|..--.|.|... +.++ ..+.|++ +..+.
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-----~~~~---a~~~l~~-~~~~~ 333 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-----DGRR---AMEILKK-LQVQG 333 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-----THHH---HHHHHHH-HHTTT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-----hHHH---HHHHHHH-HHHHc
Confidence 44677887 4899999999999999999999865444433 4543334655531 2222 3333443 22110
Q ss_pred cchhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEec---CCcc
Q 044730 185 ISCEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCA---DQKG 261 (419)
Q Consensus 185 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---DrpG 261 (419)
. ...|.++ .+...|.|.+. ++||
T Consensus 334 -----~---------------------------------------------~~~v~~~----~~~a~vsvVG~gm~~~~G 359 (421)
T 3ab4_A 334 -----N---------------------------------------------WTNVLYD----DQVGKVSLVGAGMKSHPG 359 (421)
T ss_dssp -----T---------------------------------------------CSEEEEE----CCEEEEEEECGGGTSCTT
T ss_pred -----C---------------------------------------------CceEEEe----CCeEEEEEEccCcccCcc
Confidence 0 0012222 24567888885 8999
Q ss_pred HHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHh
Q 044730 262 LFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEM 321 (419)
Q Consensus 262 Ll~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al 321 (419)
.++++..+|++.|+||.. |++ +. ... .|.+.. +..++..+.|.+++
T Consensus 360 v~a~~f~aL~~~~InI~~--is~-Se-~~i--s~vV~~--------~d~~~Av~~Lh~~f 405 (421)
T 3ab4_A 360 VTAEFMEALRDVNVNIEL--IST-SE-IRI--SVLIRE--------DDLDAAARALHEQF 405 (421)
T ss_dssp HHHHHHHHHHHTTCCCCE--EEE-ET-TEE--EEEEEG--------GGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEE--EEc-CC-CeE--EEEEeH--------HHHHHHHHHHHHHH
Confidence 999999999999999995 554 22 222 255541 23344555666555
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=95.19 E-value=0.23 Score=50.69 Aligned_cols=135 Identities=17% Similarity=0.156 Sum_probs=84.3
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHh---
Q 044730 248 AHTLLQIKC---ADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEM--- 321 (419)
Q Consensus 248 ~~t~v~V~~---~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al--- 321 (419)
+.+.|+|.+ .++||+++++..+|+++|+||.. |... .+. ..=.|.+..+ ..++..+.|.+.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~--IsQ~-tse-~~Is~~V~~~--------d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVIL--ISQG-SSE-TNISLVVSEE--------DVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEE--EEEC-CTT-CCEEEEEEGG--------GHHHHHHHHHHHHCC-
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEE--EEec-CCC-CEEEEEEech--------HHHHHHHHHHHHHhhh
Confidence 567889987 67889999999999999999998 5521 122 2223666521 1234445555555
Q ss_pred -----cCCC---eeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEE
Q 044730 322 -----LHPL---RVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFL 390 (419)
Q Consensus 322 -----~~~~---~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~ 390 (419)
.... .+.+.. ....+.|.|. ++||+++++..+|.+.||||....-.| . ...-.|.
T Consensus 385 ~~~~~~~~~~~~~v~~~~--------~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~misqgt-----S-e~~Is~v 450 (473)
T 3c1m_A 385 GKKSFLNNNLIRDVSVDK--------DVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGS-----S-EVNISFV 450 (473)
T ss_dssp ---CTTSCCCEEEEEEEE--------EEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEEESS-----C-SSEEEEE
T ss_pred cccccccccccceEEEeC--------CcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEecCC-----C-CceEEEE
Confidence 2210 111111 2456888887 589999999999999999995432223 2 0445566
Q ss_pred EecCCCCCCCCHHHHHHHHHHHHHHHc
Q 044730 391 LDESLEFPLASSQARNRIVEKVKKTLM 417 (419)
Q Consensus 391 v~d~~g~~l~~~~~~~~i~~~l~~~l~ 417 (419)
|...+. ++..+.|.+.+.
T Consensus 451 V~~~d~---------~~Av~aLh~~f~ 468 (473)
T 3c1m_A 451 IDEKDL---------LNCVRKLHEKFI 468 (473)
T ss_dssp EEGGGH---------HHHHHHHHHHHT
T ss_pred EcHHHH---------HHHHHHHHHHHh
Confidence 654332 455556665543
No 48
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=95.14 E-value=0.056 Score=51.37 Aligned_cols=54 Identities=11% Similarity=0.132 Sum_probs=42.6
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCC
Q 044730 341 ANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFP 398 (419)
Q Consensus 341 ~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~ 398 (419)
-|.|-+..+|+||-|+++-..|+.+|||+.+.+..- ...+. -.+.|||+ .+|..
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP--~~~~~-~~Y~FfvD-~eg~~ 253 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRP--SRKKA-FEYLFYAD-FIGHR 253 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEE--CSSST-TEEEEEEE-EESCT
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeE--cCCCC-cceEEEEE-EecCC
Confidence 355666667999999999999999999999988865 44443 47999995 55654
No 49
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=94.83 E-value=0.066 Score=51.61 Aligned_cols=59 Identities=15% Similarity=0.163 Sum_probs=44.9
Q ss_pred ceEEEEEeC-CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHH
Q 044730 341 ANPVELCGK-GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQA 404 (419)
Q Consensus 341 ~t~lev~~~-DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~ 404 (419)
-|.|-+..+ |+||-|+++-..|+.+|||+.+.+..- ...+. -.|.|||+ .+|.. .++..
T Consensus 201 kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP--~~~~~-~~Y~FfiD-~eg~~-~d~~v 260 (313)
T 3mwb_A 201 KTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRP--TGQYL-GHYFFSID-ADGHA-TDSRV 260 (313)
T ss_dssp EEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEE--CSSST-TSEEEEEE-EESCT-TSHHH
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEee--cCCCC-ccEEEEEE-EeCCC-CcHHH
Confidence 466767775 999999999999999999999888865 44443 46999995 55654 44444
No 50
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=94.47 E-value=0.15 Score=49.43 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=41.9
Q ss_pred EEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHH
Q 044730 343 PVELCGK--GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQA 404 (419)
Q Consensus 343 ~lev~~~--DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~ 404 (419)
.+-+... |+||-||++-..|+.+|||+.+.+..- ...+. -.|.|||+ .+|.. .|+..
T Consensus 208 s~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP--~~~~~-~~Y~FfiD-~eg~~-~d~~v 266 (329)
T 3luy_A 208 SVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRP--IKGRT-GTYSFIVT-LDAAP-WEERF 266 (329)
T ss_dssp EEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEE-EEEEEEEE-ESSCT-TSHHH
T ss_pred EEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeE--CCCCC-ccEEEEEE-EeCCc-CCHHH
Confidence 3334444 799999999999999999999888865 44543 57999985 66754 34443
No 51
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=94.04 E-value=0.52 Score=47.66 Aligned_cols=121 Identities=12% Similarity=0.077 Sum_probs=79.9
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEe-cCCCCCCCHHHHHHHHHHHHHHhcC
Q 044730 248 AHTLLQIKC---ADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQ-TDGKKVVDPKQQTALCFHLKEEMLH 323 (419)
Q Consensus 248 ~~t~v~V~~---~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~-~~g~~i~~~~~~~~l~~~L~~al~~ 323 (419)
+.+.|+|.+ .+.||++++|..+|++++++|.. |.+ . . ..-.|.+. .+-.+ ..+.+.+.|...+.
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~--i~~-~--~-~~is~~V~~~d~~~-----~~~~~~~el~~~~~- 364 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEH--MPS-G--V-DSVSLVIEDCKLDG-----KCDKIIEEIKKQCN- 364 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEE--BCE-E--T-TEEEEEEEHHHHTT-----THHHHHHHHHHHSC-
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEE--Eec-C--C-CEEEEEEecchHHH-----HHHHHHHHHHHhcC-
Confidence 456788886 68999999999999999999987 554 1 1 12236665 22111 23445555555442
Q ss_pred CCeeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecC
Q 044730 324 PLRVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDES 394 (419)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~ 394 (419)
...+.+.. ....|.|.|. .+||+.+++..+|.+.||||....-.| .. ..-.|.|...
T Consensus 365 ~~~v~v~~--------~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgt----Se--i~Is~vV~~~ 424 (446)
T 3tvi_A 365 PDSIEIHP--------NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGS----SE--INVIVGVETV 424 (446)
T ss_dssp CSEEEEEE--------EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECS----CT--TEEEEEEEGG
T ss_pred CCcEEEeC--------CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecC----CC--ceEEEEEcHH
Confidence 21232221 2457888887 589999999999999999998765434 12 4456777644
No 52
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=93.17 E-value=0.32 Score=45.71 Aligned_cols=66 Identities=12% Similarity=0.220 Sum_probs=47.0
Q ss_pred ceEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHHHHHHHHHHH
Q 044730 341 ANPVELCG---KGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQARNRIVEKVK 413 (419)
Q Consensus 341 ~t~lev~~---~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~~~~i~~~l~ 413 (419)
-|.|-+.. .|+||-|+++-..|+.+|||+.+.+..- ...+. -.+.|||+= + .+.++.. ++..+.|+
T Consensus 186 ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP--~~~~~-~~Y~FfiD~-e--~~~d~~v-~~aL~~L~ 254 (267)
T 2qmw_A 186 ATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRP--LKTQL-GMYRFFVQA-D--SAITTDI-KKVIAILE 254 (267)
T ss_dssp CSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEE--CSSST-TCEEEEEEE-S--CCSCHHH-HHHHHHHH
T ss_pred eEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEee--cCCCC-ccEEEEEEE-e--cCCcHHH-HHHHHHHH
Confidence 35566666 8999999999999999999999988865 44443 479999963 3 3445444 33334443
No 53
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=91.74 E-value=1.8 Score=44.42 Aligned_cols=121 Identities=13% Similarity=0.131 Sum_probs=76.9
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEe-cCCCCCC-CHHHHHHHHHHHHHHhc
Q 044730 248 AHTLLQIKC---ADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQ-TDGKKVV-DPKQQTALCFHLKEEML 322 (419)
Q Consensus 248 ~~t~v~V~~---~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~-~~g~~i~-~~~~~~~l~~~L~~al~ 322 (419)
+.+.|+|.+ .++||++++|..+|+++|++|.. |.+ .. ..=.|.+. .+..... ..+.++++ ...+.
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~--I~s-se---~sis~~v~~~~~~~~~~~~~~l~~~----~~el~ 409 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDV--VAT-SE---VSISLTLDPSKLWSRELIQQELDHV----VEELE 409 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEE--EEE-ET---TEEEEEECCGGGSSSCCCHHHHHHH----HHHHT
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEE--EEe-CC---CeEEEEEechHhhhhhHHHHHHHHH----HHHhC
Confidence 567888886 68999999999999999999998 665 21 22236665 2211110 12233333 33333
Q ss_pred CCCeeeeeCCCCCCCCCcceEEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEe
Q 044730 323 HPLRVMVTNRGPDTELLVANPVELCGK--GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLD 392 (419)
Q Consensus 323 ~~~~v~~~~~~~~~~~~~~t~lev~~~--DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~ 392 (419)
.-..+.+.. ....|.+.|. ..||+.+++..+|.+.|+||....-.+ .+ ..-.|.|.
T Consensus 410 ~~~~v~~~~--------~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqGs-----Se-i~Is~vV~ 467 (510)
T 2cdq_A 410 KIAVVNLLK--------GRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGA-----SK-VNISFIVN 467 (510)
T ss_dssp TTSEEEEEE--------EEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECT-----TC-SEEEEEEE
T ss_pred CCCeEEEeC--------CcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEecC-----Cc-ceEEEEEe
Confidence 211232221 2457888887 789999999999999999998754323 20 44556665
No 54
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=91.35 E-value=8 Score=38.86 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=29.6
Q ss_pred CeEEEEEEec---CCccHHHHHHHHHHhCCceEEEEEEE
Q 044730 248 AHTLLQIKCA---DQKGLFYDILRTSKDLNIQIAYGRIS 283 (419)
Q Consensus 248 ~~t~v~V~~~---DrpGLl~~i~~~L~~~~~~I~~A~I~ 283 (419)
+...|.|.|. .+||+.+++..+|++.|+||.. |+
T Consensus 373 ~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~m--Is 409 (446)
T 3tvi_A 373 NMALVATVGTGMAKTKGIANKIFTALSKENVNIRM--ID 409 (446)
T ss_dssp EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEE--EE
T ss_pred CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEE--EE
Confidence 3557888885 5899999999999999999998 66
No 55
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=90.90 E-value=0.92 Score=38.72 Aligned_cols=114 Identities=12% Similarity=0.063 Sum_probs=69.6
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcCC
Q 044730 248 AHTLLQIKC---ADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLHP 324 (419)
Q Consensus 248 ~~t~v~V~~---~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~~ 324 (419)
+.+.|+|.+ +++||..+++..+|+++|++|.. |.+ .. . .=.|.+... . ..+++.+.| ...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~--I~~-s~-~--~Isf~v~~~-~------~~~~il~~l----~~~ 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDM--VAT-SE-V--GVSLTIDND-K------NLPDIVRAL----SDI 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSC--EEC-CS-S--EEEEEESCC-T------THHHHHHHH----TTT
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEE--EEe-cC-C--EEEEEECCh-H------HHHHHHHHH----hcc
Confidence 456788875 57899999999999999999987 664 22 2 223666421 1 223333333 222
Q ss_pred CeeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecC
Q 044730 325 LRVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDES 394 (419)
Q Consensus 325 ~~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~ 394 (419)
..+.+.. ....+.+.|. ++||+.+++..+|. |++|....=.+ .. ..-.|.|...
T Consensus 80 ~~v~~~~--------~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~----Se--~~is~vv~~~ 136 (157)
T 3mah_A 80 GDVTVDK--------DMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGG----SN--YNVSVLVKAE 136 (157)
T ss_dssp EEEEEEE--------EEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECS----SS--SCEEEEEEGG
T ss_pred CeEEEeC--------CeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCC----CC--CEEEEEEcHH
Confidence 1222211 2457888876 68999999999998 99988654323 11 3456777644
No 56
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=90.63 E-value=1.1 Score=46.22 Aligned_cols=51 Identities=16% Similarity=0.168 Sum_probs=42.6
Q ss_pred cceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEe
Q 044730 340 VANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLD 392 (419)
Q Consensus 340 ~~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~ 392 (419)
.++.+-+.-.||||.+..|+..|.++|+||...++.....|+. +.-++.+.
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~--a~~~i~vd 503 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPG--ATILLRLD 503 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSC--EEEEEEES
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCE--EEEEEEEC
Confidence 3567888899999999999999999999999999998554555 66666664
No 57
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=90.28 E-value=7.3 Score=39.39 Aligned_cols=115 Identities=14% Similarity=0.205 Sum_probs=70.0
Q ss_pred CeeEEEEEE---eCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEecCCCCCCchhHHHHHHHHHHHHhcccc
Q 044730 108 SLYLLKYCC---VDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITDGLELLHTKQRREETCEHMIAVLGEYS 184 (419)
Q Consensus 108 ~~~~i~v~~---~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~r~~~i~~~L~~vL~~~~ 184 (419)
+...|++.+ .++||.++++..+|+++|+||.--...|+. ..+ .|.|... ..++..+.|.+.+.+..
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse-~~I--s~~V~~~--------d~~~a~~~L~~~l~~~~ 385 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE-TNI--SLVVSEE--------DVDKALKALKREFGDFG 385 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT-CCE--EEEEEGG--------GHHHHHHHHHHHHCC--
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC-CEE--EEEEech--------HHHHHHHHHHHHHhhhc
Confidence 456788887 577899999999999999999865443432 222 3555431 13334444444331100
Q ss_pred cchhhhccCCccccccccCCCChhHHhhhhcCCCCCccccccccccccccCccEEEEEeCCCCCeEEEEEEec---CCcc
Q 044730 185 ISCEIQLAGPEYESLQAFTSLPPAVAEELFGSELPDKEDFSRVLSTEVTQNKASITVDNLLSPAHTLLQIKCA---DQKG 261 (419)
Q Consensus 185 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---DrpG 261 (419)
+ . -|. ... .-..|.++ .+...|.|.+. ++||
T Consensus 386 -----~-----------------~----~~~--------------~~~--~~~~v~~~----~~~a~vsvVG~gm~~~~G 419 (473)
T 3c1m_A 386 -----K-----------------K----SFL--------------NNN--LIRDVSVD----KDVCVISVVGAGMRGAKG 419 (473)
T ss_dssp ----------------------------CTT--------------SCC--CEEEEEEE----EEEEEEEEECTTTTTCTT
T ss_pred -----c-----------------c----ccc--------------ccc--ccceEEEe----CCcEEEEEEecCCCCChh
Confidence 0 0 000 000 00123332 24567889885 5999
Q ss_pred HHHHHHHHHHhCCceEEE
Q 044730 262 LFYDILRTSKDLNIQIAY 279 (419)
Q Consensus 262 Ll~~i~~~L~~~~~~I~~ 279 (419)
.++++..+|++.|+||..
T Consensus 420 vaak~f~aL~~~~InI~m 437 (473)
T 3c1m_A 420 IAGKIFTAVSESGANIKM 437 (473)
T ss_dssp HHHHHHHHHHHHTCCCCE
T ss_pred HHHHHHHHHHHCCCCEEE
Confidence 999999999999999955
No 58
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.94 E-value=0.76 Score=45.80 Aligned_cols=48 Identities=10% Similarity=0.140 Sum_probs=40.8
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEe
Q 044730 341 ANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLD 392 (419)
Q Consensus 341 ~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~ 392 (419)
...|-+.-.|+||++..|+.+|.++|+||......+ .|+. +.-++-+.
T Consensus 331 ~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~--A~~vidvD 378 (404)
T 1sc6_A 331 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQM--GYVVIDIE 378 (404)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSE--EEEEEEEE
T ss_pred cceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCE--EEEEEEcC
Confidence 456778899999999999999999999999999999 6776 65555554
No 59
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.83 E-value=1.1 Score=44.56 Aligned_cols=50 Identities=18% Similarity=0.084 Sum_probs=44.0
Q ss_pred CeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEec
Q 044730 108 SLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFITD 158 (419)
Q Consensus 108 ~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~~ 158 (419)
+...|.+.-.|+||.+..|+.+|.++|+||....+.+ .++.++-++-+..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCC
Confidence 4567889999999999999999999999999999998 7888877777654
No 60
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=87.61 E-value=2.1 Score=44.11 Aligned_cols=64 Identities=17% Similarity=0.138 Sum_probs=48.6
Q ss_pred CCCeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecC-CCeEEEEEEEecCCCCCCchhHHHHHH
Q 044730 106 KPSLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTP-DGRVLDLFFITDGLELLHTKQRREETC 173 (419)
Q Consensus 106 ~~~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~-~g~~~d~f~V~~~~~~~~~~~r~~~i~ 173 (419)
.+....|.+.-+|+||.+..|+..|.++|+||...++.... +|.++-++.+.++ .+++.+++|+
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~----~~~~~l~~l~ 515 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD----VPDDVRTAIA 515 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC----CCHHHHHHHH
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC----CCHHHHHHHh
Confidence 34567788889999999999999999999999999998743 5567666666542 2455555554
No 61
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=87.08 E-value=1.9 Score=40.77 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=40.5
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEEeecCce-eEeEEEEecCCCC
Q 044730 249 HTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYR-NMDLFIRQTDGKK 303 (419)
Q Consensus 249 ~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~-~~d~F~v~~~g~~ 303 (419)
.|.|.+..+|+||-|+++...|+.+|+|+.. |.++...+. ..-.|+++-+|..
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~FfvD~eg~~ 253 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTK--IESRPSRKKAFEYLFYADFIGHR 253 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTEEEEEEEEESCT
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeE--EEeeEcCCCCcceEEEEEEecCC
Confidence 4556666689999999999999999999988 777644333 3445788877754
No 62
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=85.13 E-value=1.1 Score=44.73 Aligned_cols=67 Identities=12% Similarity=0.087 Sum_probs=47.2
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCCCHHHHHHHHHHHHH
Q 044730 341 ANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLASSQARNRIVEKVKK 414 (419)
Q Consensus 341 ~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~~~~~~~~i~~~l~~ 414 (419)
-|.|-+..+|+||-|+++-..|+.+|||+.+.+..- ...+. -.+.|||. -+ ...++ ..+++.+.|++
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRP--sk~~~-~eY~FfVD-~e--h~~d~-~v~~AL~eL~~ 100 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRP--SRLNK-DEYEFFTY-LD--KRTKP-VLGSIIKSLRN 100 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEE--CSSCT-TEEEEEEC-BC--GGGHH-HHHHHHHHHHH
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeee--cCCCC-ccEEEEEE-Ee--eCCCH-HHHHHHHHHHh
Confidence 567777778999999999999999999999888755 43332 57999995 33 22332 22444455544
No 63
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=84.56 E-value=6 Score=38.13 Aligned_cols=44 Identities=18% Similarity=0.210 Sum_probs=34.8
Q ss_pred CCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEe-EEEEecCCCC
Q 044730 258 DQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMD-LFIRQTDGKK 303 (419)
Q Consensus 258 DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d-~F~v~~~g~~ 303 (419)
|+||-|+++...|+.+|+|+.. |.+....+...+ .|+++-+|..
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~FfiD~eg~~ 261 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTS--FISRPIKGRTGTYSFIVTLDAAP 261 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEE--EEEEEETTEEEEEEEEEEESSCT
T ss_pred CCCCHHHHHHHHHHHCCcceEE--EEeeECCCCCccEEEEEEEeCCc
Confidence 7999999999999999999988 776544444444 5788877764
No 64
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=84.52 E-value=2.7 Score=40.25 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=40.5
Q ss_pred CeEEEEEEec-CCccHHHHHHHHHHhCCceEEEEEEEEeecCcee-EeEEEEecCCCC
Q 044730 248 AHTLLQIKCA-DQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRN-MDLFIRQTDGKK 303 (419)
Q Consensus 248 ~~t~v~V~~~-DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~-~d~F~v~~~g~~ 303 (419)
..|.|.+..+ |+||-|+++...|+.+|+|+.. |.+....+.. .-.|+++.+|..
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~FfiD~eg~~ 255 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSR--IESRPTGQYLGHYFFSIDADGHA 255 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTSEEEEEEEESCT
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEE--EEEeecCCCCccEEEEEEEeCCC
Confidence 4566667775 9999999999999999999987 7765433333 335788877754
No 65
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=82.70 E-value=3.6 Score=38.48 Aligned_cols=51 Identities=29% Similarity=0.338 Sum_probs=37.9
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEEeecCce-eEeEEEEecC
Q 044730 248 AHTLLQIKC---ADQKGLFYDILRTSKDLNIQIAYGRISSSVKGYR-NMDLFIRQTD 300 (419)
Q Consensus 248 ~~t~v~V~~---~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~-~~d~F~v~~~ 300 (419)
..|.|.+.. +|+||-|+++...|+.+|+|+.. |.++...+. ..-.|+++.+
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSW--IESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTCEEEEEEES
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeE--EEEeecCCCCccEEEEEEEe
Confidence 344555555 89999999999999999999988 776644333 3345788855
No 66
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=81.28 E-value=11 Score=37.45 Aligned_cols=50 Identities=14% Similarity=0.093 Sum_probs=41.5
Q ss_pred CCeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecCCCeEEEEEEEe
Q 044730 107 PSLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTPDGRVLDLFFIT 157 (419)
Q Consensus 107 ~~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~~g~~~d~f~V~ 157 (419)
++...|.+.-+|.||.+.+|+.+|+++|+||..-...| .++.+.-++-|.
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~-~~~~~y~~~d~~ 390 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT-DGEVGYLVMEAD 390 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE-CSSCEEEEEEEC
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC-CCceEEEEEEec
Confidence 45689999999999999999999999999999877666 666665555553
No 67
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=80.26 E-value=1.5 Score=44.19 Aligned_cols=35 Identities=29% Similarity=0.216 Sum_probs=30.1
Q ss_pred CcceEEEEEeCCCcchHHHHHHHHHhCCceEEEEE
Q 044730 339 LVANPVELCGKGRPRVFYDVTLALKALGICIFSAE 373 (419)
Q Consensus 339 ~~~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~ 373 (419)
...+-+.+...|+||+|++|+.+|.++|++|.+.-
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~ 391 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMV 391 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEE
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEe
Confidence 35667889999999999999999999999998754
No 68
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=75.36 E-value=41 Score=34.30 Aligned_cols=60 Identities=10% Similarity=0.111 Sum_probs=40.7
Q ss_pred eEEEEEEec--CCccHHHHHHHHHHhCCceEEEEEEEEeecCce-eEeEEEEecCCCCCCCHHHHHHHHHHHHHHh
Q 044730 249 HTLLQIKCA--DQKGLFYDILRTSKDLNIQIAYGRISSSVKGYR-NMDLFIRQTDGKKVVDPKQQTALCFHLKEEM 321 (419)
Q Consensus 249 ~t~v~V~~~--DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~-~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al 321 (419)
...|.|.+. ..||+.+++..+|++.|+||.. |+. |.. .-=.|.|. ++..++..+.|.+++
T Consensus 420 ~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~m--Isq---GsSei~Is~vV~--------~~d~~~Av~aLH~~f 482 (510)
T 2cdq_A 420 RAIISLIGNVQHSSLILERAFHVLYTKGVNVQM--ISQ---GASKVNISFIVN--------EAEAEGCVQALHKSF 482 (510)
T ss_dssp EEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSE--EEE---CTTCSEEEEEEE--------HHHHHHHHHHHHHHH
T ss_pred cEEEEEEEECCCChhHHHHHHHHHHHCCCCEEE--EEe---cCCcceEEEEEe--------HHHHHHHHHHHHHHH
Confidence 457777776 7889999999999999999998 663 222 22235664 233444555566555
No 69
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=73.18 E-value=5.9 Score=39.50 Aligned_cols=49 Identities=14% Similarity=0.128 Sum_probs=41.0
Q ss_pred cceEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCC
Q 044730 340 VANPVELCGKGRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESL 395 (419)
Q Consensus 340 ~~t~lev~~~DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~ 395 (419)
..+.|-+.-.++||+|..|+.+|+++|+||...--.| .|+- + |.+.|.+
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~--~~~~--~---y~~~d~~ 390 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT--DGEV--G---YLVMEAD 390 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE--CSSC--E---EEEEEEC
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC--CCce--E---EEEEEec
Confidence 4678999999999999999999999999999999888 5565 3 4455554
No 70
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=69.80 E-value=8 Score=38.86 Aligned_cols=51 Identities=24% Similarity=0.468 Sum_probs=36.5
Q ss_pred CeeEEEEEEeCCCChHHHHHHHHHHcCCeEEEEEEEecC-CCeEEEEEEEec
Q 044730 108 SLYLLKYCCVDRKGLLHDATKVLTELEFTIQRVKVMTTP-DGRVLDLFFITD 158 (419)
Q Consensus 108 ~~~~i~v~~~DrpGLl~~i~~vL~~~g~nI~~A~i~T~~-~g~~~d~f~V~~ 158 (419)
..+-|.+...|+||.|++|+++|.++|++|.+....-.. ++..+.++.+|.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 356788889999999999999999999999876543211 112356777775
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=61.75 E-value=9.2 Score=38.10 Aligned_cols=52 Identities=17% Similarity=0.212 Sum_probs=38.1
Q ss_pred CCeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEEeecCc-eeEeEEEEecC
Q 044730 247 PAHTLLQIKCADQKGLFYDILRTSKDLNIQIAYGRISSSVKGY-RNMDLFIRQTD 300 (419)
Q Consensus 247 ~~~t~v~V~~~DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~-~~~d~F~v~~~ 300 (419)
...|.|.+..+|+||-|+++...|+.+|+|+.+ |.+..... ...=.|+++.+
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTk--IESRPsk~~~~eY~FfVD~e 84 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTH--IESRPSRLNKDEYEFFTYLD 84 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTS--EEEEECSSCTTEEEEEECBC
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEE--EEeeecCCCCccEEEEEEEe
Confidence 345556666789999999999999999999987 66653322 23345788754
No 72
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=50.71 E-value=15 Score=36.75 Aligned_cols=121 Identities=19% Similarity=0.167 Sum_probs=74.4
Q ss_pred CeEEEEEEec---CCccHHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEe-cCCCCCCCHHHHHHHHHHHHHHhcC
Q 044730 248 AHTLLQIKCA---DQKGLFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQ-TDGKKVVDPKQQTALCFHLKEEMLH 323 (419)
Q Consensus 248 ~~t~v~V~~~---DrpGLl~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~-~~g~~i~~~~~~~~l~~~L~~al~~ 323 (419)
+.+.|+|.+. +.||++++|..+|++++++|.. |.+ + + ..=.|.+. .+...-......+++...|.. + .
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~--i~s-s--~-~sis~~v~~~~~~~~~~~~~~~~~~~el~~-~-~ 378 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDL--ITT-S--E-VSVALTLDTTGSTSTGDTLLTQSLLMELSA-L-C 378 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSE--EEE-E--T-TEEEEEECCCCCSSTTCCSSCHHHHHHHHH-H-S
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEE--EEe-C--C-CeEEEEEeccccchhhHHHHHHHHHHHhcc-C-C
Confidence 4667888774 7789999999999999999988 665 2 2 22236665 322110011233455555553 2 2
Q ss_pred CCeeeeeCCCCCCCCCcceEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecC
Q 044730 324 PLRVMVTNRGPDTELLVANPVELCGK---GRPRVFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDES 394 (419)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~ 394 (419)
+ +.+.. ....|.+.|. ..||+.+++..+|.+ +||....-.+ .+ ..-.|.|...
T Consensus 379 ~--v~~~~--------~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mIsqg~-----Se-~~Is~vV~~~ 434 (449)
T 2j0w_A 379 R--VEVEE--------GLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMICYGA-----SS-HNLCFLVPGE 434 (449)
T ss_dssp C--EEEEE--------EEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEEEESS-----CT-TEEEEEEEGG
T ss_pred e--EEEeC--------CeEEEEEECCCccccccHHHHHHHHHhC--CCeEEEEecC-----CC-cEEEEEEeHH
Confidence 2 22211 2457888888 589999999999965 7776543223 31 3456777644
No 73
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=43.73 E-value=57 Score=27.20 Aligned_cols=103 Identities=10% Similarity=-0.008 Sum_probs=63.1
Q ss_pred CCCeEEEEeC---CCCCchhHHHHHHHHhcCeEEEEEEeeeCCCeEEEEEEEEcCCCCCCCCHHHHHHHHHhhCCCCccc
Q 044730 18 TEPSVVTVNC---PDKNGLGCDLCRIILEFGLFIVRGDFSTDGRWCYIVLWVVPDASSDKVDWESLKNRLLSVCPSILVS 94 (419)
Q Consensus 18 ~~~t~v~v~~---~dk~Gll~d~~~~l~d~~l~I~k~~istdg~w~~dvf~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 94 (419)
.+.+.|+|.. ++++|.+..+-+.|.+.|++|---..|.+ ++-++.+..- .+...++++.... .
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s~~-----~Isf~v~~~~-------~~~~il~~l~~~~--~ 81 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATSEV-----GVSLTIDNDK-------NLPDIVRALSDIG--D 81 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECCSS-----EEEEEESCCT-------THHHHHHHHTTTE--E
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEecCC-----EEEEEECChH-------HHHHHHHHHhccC--e
Confidence 4567777763 57899999999999999998754443333 3333334221 2333344433110 0
Q ss_pred cccCCCCCCCCCCCeeEEEEEEe---CCCChHHHHHHHHHHcCCeEEEEEEEe
Q 044730 95 YYFNQPSSNSSKPSLYLLKYCCV---DRKGLLHDATKVLTELEFTIQRVKVMT 144 (419)
Q Consensus 95 ~~~~~~~v~~~~~~~~~i~v~~~---DrpGLl~~i~~vL~~~g~nI~~A~i~T 144 (419)
+ ....+...|.++|. ++||..+++..+|+ |+||.--..-+
T Consensus 82 -------v-~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~ 124 (157)
T 3mah_A 82 -------V-TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGG 124 (157)
T ss_dssp -------E-EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECS
T ss_pred -------E-EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCC
Confidence 0 11234678888884 78999999999999 99988643334
No 74
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=41.66 E-value=59 Score=26.84 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=28.6
Q ss_pred CeEEEEEEec---CCccHHHHHHHHHHhCCceEEEEEEEE
Q 044730 248 AHTLLQIKCA---DQKGLFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 248 ~~t~v~V~~~---DrpGLl~~i~~~L~~~~~~I~~A~I~t 284 (419)
.+..++|.++ |-.|+++.++..|++.|+.|+- |+|
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~--iSt 98 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV--VST 98 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE--EEC
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE--EEe
Confidence 3446666655 8889999999999999999998 664
No 75
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=34.71 E-value=56 Score=25.43 Aligned_cols=45 Identities=20% Similarity=0.097 Sum_probs=31.2
Q ss_pred hHHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCC
Q 044730 354 VFYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLA 400 (419)
Q Consensus 354 LL~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~ 400 (419)
=+..+.+.|.+.|+.+...-.... .|.. +....||+.|++|+.+.
T Consensus 80 d~~~~~~~l~~~G~~~~~~p~~~~-~~~~-~~~~~~~~~DPdGn~ie 124 (135)
T 3rri_A 80 HFDNLYKLAKQRGIPFYHDLSRRF-EGLI-EEHETFFLIDPSNNLLE 124 (135)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEES-TTST-TCEEEEEEECTTCCEEE
T ss_pred hHHHHHHHHHHcCCceecCccccc-CCCC-CceEEEEEECCCCCEEE
Confidence 467788889999999876555430 1222 24457999999998764
No 76
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=31.81 E-value=1.3e+02 Score=24.56 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=29.4
Q ss_pred CCeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEE
Q 044730 247 PAHTLLQIKC---ADQKGLFYDILRTSKDLNIQIAYGRISS 284 (419)
Q Consensus 247 ~~~t~v~V~~---~DrpGLl~~i~~~L~~~~~~I~~A~I~t 284 (419)
..+..++|.+ -|-.|+++.++..|++.|+.|+- |+|
T Consensus 69 ~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~--iSt 107 (133)
T 1zvp_A 69 ALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANV--IAG 107 (133)
T ss_dssp SCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE--EEC
T ss_pred CCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE--EEe
Confidence 4566677765 58999999999999999999998 664
No 77
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=30.74 E-value=1.3e+02 Score=23.32 Aligned_cols=48 Identities=4% Similarity=-0.116 Sum_probs=33.6
Q ss_pred CCeEEEEeCCCCCchhHHHHHHHHhcCeE-EEEEEeeeCCCeEEEEEEEEcCCCCC
Q 044730 19 EPSVVTVNCPDKNGLGCDLCRIILEFGLF-IVRGDFSTDGRWCYIVLWVVPDASSD 73 (419)
Q Consensus 19 ~~t~v~v~~~dk~Gll~d~~~~l~d~~l~-I~k~~istdg~w~~dvf~v~~~~g~~ 73 (419)
....+-+.+.| +-++.+-|.+.|.. |...-.....| .- |++.|++|+.
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G--~~-~~~~DPdGn~ 114 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDG--KK-AIVLDPDGHS 114 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-C--EE-EEEECTTCCE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCc--cE-EEEECCCCCE
Confidence 34556667777 67788999999999 76544333333 33 8999999984
No 78
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=27.36 E-value=2.8e+02 Score=23.36 Aligned_cols=94 Identities=10% Similarity=0.051 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhCCceEEEEEEEEeecCceeEeEEEEecCCCCCCCHHHHHHHHHHHHHHhcCCCeeeeeCCCCCCCCCcc
Q 044730 262 LFYDILRTSKDLNIQIAYGRISSSVKGYRNMDLFIRQTDGKKVVDPKQQTALCFHLKEEMLHPLRVMVTNRGPDTELLVA 341 (419)
Q Consensus 262 Ll~~i~~~L~~~~~~I~~A~I~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~al~~~~~v~~~~~~~~~~~~~~ 341 (419)
+..-+..++.. |+.+.+.++.. ..+....-+|+=...|-. =+..+.+.+.|.+.|.+.. . ......
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~-~g~~~~LrV~ID~~~gi~---lddC~~vSr~is~~LD~~~------~---d~i~~~ 79 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGK-IGSDMILSIFVDKPEGIT---LNDTADLTEMISPVLDTIK------P---DPFPEQ 79 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEE-ETTEEEEEEEEECSSCCC---HHHHHHHHHHHGGGTTTCC------S---CCCCSC
T ss_pred HHHHHHHHHcC-CcEEEEEEEEe-cCCCcEEEEEEECCCCCC---HHHHHHHHHHHHHHhcccc------c---cCCCCC
Confidence 44445666777 99999988775 223344433332244423 2468888888888886320 0 012246
Q ss_pred eEEEEEeCCCcchHHHHHHHHHhCCceE
Q 044730 342 NPVELCGKGRPRVFYDVTLALKALGICI 369 (419)
Q Consensus 342 t~lev~~~DRpGLL~~It~~L~~~gl~I 369 (419)
+.|||+++.=-.-|..-...-+-.|-.|
T Consensus 80 Y~LEVSSPGldRpL~~~~df~r~~G~~V 107 (164)
T 1ib8_A 80 YFLEITSPGLERPLKTKDAVAGAVGKYI 107 (164)
T ss_dssp EEEEEECCSSSSCCSSHHHHHHHCSEEE
T ss_pred eEEEEeCCCCCCCCCCHHHHHHhCCcEE
Confidence 8899998843333444444445555444
No 79
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=24.29 E-value=66 Score=26.51 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=27.8
Q ss_pred eEEEEEeC---CCcchHHHHHHHHHhCCceEEEEEEeecc
Q 044730 342 NPVELCGK---GRPRVFYDVTLALKALGICIFSAEIGRHS 378 (419)
Q Consensus 342 t~lev~~~---DRpGLL~~It~~L~~~gl~I~~A~I~T~~ 378 (419)
-.|.|.+. |-.|+++.|+..|++.||+|+. |+|+.
T Consensus 63 r~i~v~~~l~~~~vGilA~is~pLA~agIsif~--iSty~ 100 (134)
T 1zhv_A 63 SCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV--VSTFD 100 (134)
T ss_dssp EEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE--EECSS
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE--EEecc
Confidence 34555544 8889999999999999999985 66744
No 80
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=23.85 E-value=80 Score=25.23 Aligned_cols=43 Identities=14% Similarity=0.164 Sum_probs=30.6
Q ss_pred HHHHHHHHHhCCceEEEEEEeecccCCceeEEEEEEEecCCCCCCC
Q 044730 355 FYDVTLALKALGICIFSAEIGRHSTSHRQWEVYRFLLDESLEFPLA 400 (419)
Q Consensus 355 L~~It~~L~~~gl~I~~A~I~T~~~Ge~~~~~d~F~v~d~~g~~l~ 400 (419)
+..+.+.|.+.|+.+....... .|... ....||+.|++|..+.
T Consensus 101 l~~~~~~l~~~G~~~~~~p~~~--~~~~g-~~~~~~~~DPdGn~iE 143 (147)
T 3zw5_A 101 LEEMIQHLKACDVPIEEGPVPR--TGAKG-PIMSIYFRDPDRNLIE 143 (147)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEE--EETTE-EEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHcCCceeeCcccc--cCCCC-ceEEEEEECCCCCEEE
Confidence 6667788999999987665544 33331 3457999999998763
No 81
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=23.16 E-value=1e+02 Score=25.26 Aligned_cols=36 Identities=14% Similarity=-0.033 Sum_probs=28.0
Q ss_pred ceEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEeecc
Q 044730 341 ANPVELCG---KGRPRVFYDVTLALKALGICIFSAEIGRHS 378 (419)
Q Consensus 341 ~t~lev~~---~DRpGLL~~It~~L~~~gl~I~~A~I~T~~ 378 (419)
+..+.|.+ -|-.|+++.|+..|++.||+|+- |+|+.
T Consensus 71 wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~--iSty~ 109 (133)
T 1zvp_A 71 FSLITLTVHSSLEAVGLTAAFATKLAEHGISANV--IAGYY 109 (133)
T ss_dssp EEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE--EECSS
T ss_pred eEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE--EEecc
Confidence 44555554 58999999999999999999985 66644
No 82
>2ovm_B NCOR, progesterone receptor; nuclear receptor, steroid receptor, CO-repressor, asoprisnil, transcription; HET: AS0; 2.60A {Homo sapiens}
Probab=21.05 E-value=33 Score=19.61 Aligned_cols=13 Identities=31% Similarity=0.565 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHcC
Q 044730 406 NRIVEKVKKTLMG 418 (419)
Q Consensus 406 ~~i~~~l~~~l~~ 418 (419)
.-++.-+|++|||
T Consensus 11 ~gleaiirkalmg 23 (26)
T 2ovm_B 11 LGLEDIIRKALMG 23 (26)
T ss_pred cCHHHHHHHHHhh
Confidence 3467888999997
No 83
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=20.97 E-value=3.1e+02 Score=21.56 Aligned_cols=41 Identities=17% Similarity=0.283 Sum_probs=32.6
Q ss_pred CCeeEEEEEEeCCCChHHHHHHHHHHc---CCeEEEEEEEecCCCeE
Q 044730 107 PSLYLLKYCCVDRKGLLHDATKVLTEL---EFTIQRVKVMTTPDGRV 150 (419)
Q Consensus 107 ~~~~~i~v~~~DrpGLl~~i~~vL~~~---g~nI~~A~i~T~~~g~~ 150 (419)
|..+.+.+.|+..+++...|..++..+ +..+ +.-.+.+|+.
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~---~~r~Ss~GkY 77 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP---TVKPSSKGNY 77 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE---EEEESSCSSE
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc---eecCCCCCeE
Confidence 457899999999999999999999988 7777 3334455653
No 84
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=20.61 E-value=2.9e+02 Score=21.18 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=35.0
Q ss_pred CCeeEEEEEEeCCCChHHHHHHHHHHcCCe-EEEEEEEecCCCeEEEEEEEecCCCC
Q 044730 107 PSLYLLKYCCVDRKGLLHDATKVLTELEFT-IQRVKVMTTPDGRVLDLFFITDGLEL 162 (419)
Q Consensus 107 ~~~~~i~v~~~DrpGLl~~i~~vL~~~g~n-I~~A~i~T~~~g~~~d~f~V~~~~~~ 162 (419)
..++.+.+...| +....+.|.++|.. +...-. ..+.|.. |++.|++|.
T Consensus 65 ~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~-~~~~G~~---~~~~DPdGn 113 (128)
T 3g12_A 65 IPSLQLGFQITD----LEKTVQELVKIPGAMCILDPT-DMPDGKK---AIVLDPDGH 113 (128)
T ss_dssp CCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEE-ECC-CEE---EEEECTTCC
T ss_pred CCceEEEEEeCC----HHHHHHHHHHCCCceeccCce-eCCCccE---EEEECCCCC
Confidence 346677788888 88899999999999 775433 3355654 888898775
Done!