Query 044731
Match_columns 443
No_of_seqs 134 out of 1129
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 06:11:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044731.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044731hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02863 UDP-glucoronosyl/UDP- 100.0 4.5E-61 9.8E-66 480.9 43.8 423 1-434 1-472 (477)
2 PLN02534 UDP-glycosyltransfera 100.0 8.5E-60 1.8E-64 470.8 41.8 419 7-435 6-488 (491)
3 PLN02992 coniferyl-alcohol glu 100.0 4E-59 8.6E-64 464.2 40.7 401 8-434 4-470 (481)
4 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.7E-58 3.8E-63 459.2 40.0 393 7-433 5-450 (451)
5 PLN02764 glycosyltransferase f 100.0 8.3E-58 1.8E-62 450.9 40.7 403 9-439 5-451 (453)
6 PLN02555 limonoid glucosyltran 100.0 7.3E-58 1.6E-62 456.4 40.5 411 6-438 4-474 (480)
7 PLN03015 UDP-glucosyl transfer 100.0 9.7E-58 2.1E-62 451.7 40.6 397 9-431 3-466 (470)
8 PLN02152 indole-3-acetate beta 100.0 2.7E-57 5.8E-62 449.4 39.9 398 9-431 3-454 (455)
9 PLN02173 UDP-glucosyl transfer 100.0 2.6E-57 5.7E-62 448.8 39.7 390 7-432 3-447 (449)
10 PLN03007 UDP-glucosyltransfera 100.0 6.8E-57 1.5E-61 454.4 41.3 415 6-434 2-481 (482)
11 PLN02208 glycosyltransferase f 100.0 5E-57 1.1E-61 447.6 38.4 394 9-434 4-440 (442)
12 PLN02562 UDP-glycosyltransfera 100.0 8E-57 1.7E-61 448.5 39.7 389 9-432 6-448 (448)
13 PLN02670 transferase, transfer 100.0 1.6E-56 3.5E-61 445.2 41.1 415 7-435 4-467 (472)
14 PLN00414 glycosyltransferase f 100.0 1.3E-56 2.7E-61 445.3 39.4 398 9-438 4-445 (446)
15 PLN02207 UDP-glycosyltransfera 100.0 2.4E-56 5.2E-61 443.5 40.9 401 9-435 3-467 (468)
16 PLN00164 glucosyltransferase; 100.0 2.7E-56 5.9E-61 447.9 40.8 403 9-436 3-476 (480)
17 PLN02210 UDP-glucosyl transfer 100.0 5.1E-56 1.1E-60 443.2 41.2 391 8-432 7-454 (456)
18 PLN03004 UDP-glycosyltransfera 100.0 9.3E-56 2E-60 438.0 36.9 394 9-422 3-450 (451)
19 PLN02554 UDP-glycosyltransfera 100.0 1.1E-54 2.3E-59 437.9 38.8 400 9-433 2-478 (481)
20 PLN02448 UDP-glycosyltransfera 100.0 4.8E-54 1E-58 431.6 40.0 394 7-434 8-458 (459)
21 PLN02167 UDP-glycosyltransfera 100.0 4.5E-54 9.8E-59 432.7 38.8 407 8-434 2-473 (475)
22 PHA03392 egt ecdysteroid UDP-g 100.0 9.6E-36 2.1E-40 301.3 29.9 373 9-435 20-468 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 1.6E-35 3.5E-40 303.7 7.2 343 11-412 2-425 (500)
24 TIGR01426 MGT glycosyltransfer 100.0 3.2E-29 6.8E-34 249.2 28.3 329 16-412 2-375 (392)
25 KOG1192 UDP-glucuronosyl and U 100.0 1.8E-30 3.8E-35 266.3 16.0 364 9-411 5-437 (496)
26 cd03784 GT1_Gtf_like This fami 100.0 5.1E-29 1.1E-33 248.6 19.2 346 10-429 1-399 (401)
27 COG1819 Glycosyl transferases, 99.9 3.5E-25 7.7E-30 218.5 19.9 352 9-435 1-402 (406)
28 PRK12446 undecaprenyldiphospho 99.4 1.4E-10 2.9E-15 113.3 24.7 298 11-405 3-335 (352)
29 PF13528 Glyco_trans_1_3: Glyc 99.4 1.8E-10 3.9E-15 111.2 22.9 117 10-145 1-124 (318)
30 PF03033 Glyco_transf_28: Glyc 99.2 1E-11 2.3E-16 104.6 4.9 126 12-146 1-132 (139)
31 TIGR00661 MJ1255 conserved hyp 99.1 9.7E-09 2.1E-13 99.3 20.4 116 11-143 1-121 (321)
32 COG0707 MurG UDP-N-acetylgluco 98.9 4.5E-07 9.7E-12 88.0 24.4 114 11-142 2-121 (357)
33 PRK00726 murG undecaprenyldiph 98.9 2.4E-06 5.2E-11 83.9 27.4 114 10-140 2-119 (357)
34 TIGR00215 lpxB lipid-A-disacch 98.8 6.7E-07 1.4E-11 88.6 19.9 71 354-429 310-384 (385)
35 cd03785 GT1_MurG MurG is an N- 98.6 1.3E-05 2.9E-10 78.3 23.7 113 11-140 1-117 (350)
36 PRK00025 lpxB lipid-A-disaccha 98.3 0.00028 6E-09 69.9 23.2 109 10-141 2-115 (380)
37 TIGR01133 murG undecaprenyldip 98.2 0.0012 2.6E-08 64.4 26.1 114 10-140 1-118 (348)
38 PRK13609 diacylglycerol glucos 98.1 0.0013 2.7E-08 65.2 24.4 37 9-45 4-41 (380)
39 cd03814 GT1_like_2 This family 97.9 0.023 4.9E-07 55.0 28.7 28 20-47 14-41 (364)
40 PLN02871 UDP-sulfoquinovose:DA 97.8 0.037 8E-07 56.4 28.1 41 7-47 56-101 (465)
41 PRK13608 diacylglycerol glucos 97.6 0.012 2.6E-07 58.5 20.4 67 353-432 304-370 (391)
42 cd03818 GT1_ExpC_like This fam 97.5 0.11 2.4E-06 51.7 32.0 112 11-143 1-117 (396)
43 cd03816 GT1_ALG1_like This fam 97.5 0.075 1.6E-06 53.3 26.0 120 9-141 3-127 (415)
44 cd03823 GT1_ExpE7_like This fa 97.3 0.16 3.5E-06 48.9 27.1 109 20-141 15-126 (359)
45 cd03794 GT1_wbuB_like This fam 97.3 0.18 3.8E-06 49.0 26.3 29 20-48 14-42 (394)
46 cd03800 GT1_Sucrose_synthase T 97.3 0.23 4.9E-06 49.0 27.4 108 20-141 21-130 (398)
47 cd03817 GT1_UGDG_like This fam 97.2 0.24 5.2E-06 47.8 27.3 30 18-47 12-41 (374)
48 COG4671 Predicted glycosyl tra 96.8 0.45 9.8E-06 45.4 21.1 103 9-123 9-115 (400)
49 cd03801 GT1_YqgM_like This fam 96.5 0.85 1.9E-05 43.5 28.4 100 20-142 14-115 (374)
50 PRK05749 3-deoxy-D-manno-octul 96.3 1.4 3.1E-05 44.2 25.2 97 11-141 51-153 (425)
51 PRK10307 putative glycosyl tra 96.1 1.7 3.7E-05 43.4 31.4 38 10-47 1-42 (412)
52 cd03820 GT1_amsD_like This fam 96.0 1.5 3.3E-05 41.5 27.5 30 19-48 12-41 (348)
53 cd03825 GT1_wcfI_like This fam 95.9 1.8 3.9E-05 41.8 25.0 37 10-46 1-39 (365)
54 TIGR03590 PseG pseudaminic aci 95.8 0.097 2.1E-06 49.4 10.9 96 18-141 12-109 (279)
55 PLN02605 monogalactosyldiacylg 95.8 2.3 5E-05 42.1 22.0 46 356-412 316-361 (382)
56 cd03796 GT1_PIG-A_like This fa 95.8 2.4 5.2E-05 42.1 26.8 100 21-140 15-118 (398)
57 PF04007 DUF354: Protein of un 95.7 0.16 3.5E-06 49.0 12.2 104 21-146 11-114 (335)
58 TIGR03492 conserved hypothetic 95.7 2.6 5.7E-05 41.9 24.9 66 353-428 325-393 (396)
59 PF13477 Glyco_trans_4_2: Glyc 95.6 0.16 3.4E-06 42.1 10.4 100 12-141 2-105 (139)
60 cd03808 GT1_cap1E_like This fa 95.6 2.2 4.8E-05 40.6 27.5 106 11-141 1-109 (359)
61 PF13579 Glyco_trans_4_4: Glyc 95.4 0.054 1.2E-06 45.5 6.9 94 25-142 6-103 (160)
62 cd04962 GT1_like_5 This family 95.1 3.6 7.8E-05 40.0 25.4 38 10-47 1-39 (371)
63 COG1519 KdtA 3-deoxy-D-manno-o 94.9 4.4 9.5E-05 39.9 24.7 99 11-142 50-153 (419)
64 cd03795 GT1_like_4 This family 94.4 4.9 0.00011 38.6 26.8 30 19-48 13-42 (357)
65 cd03798 GT1_wlbH_like This fam 94.3 5.2 0.00011 38.1 30.2 30 19-48 13-42 (377)
66 cd03805 GT1_ALG2_like This fam 94.1 6.5 0.00014 38.6 29.3 37 10-46 1-39 (392)
67 PF06722 DUF1205: Protein of u 94.0 0.054 1.2E-06 42.0 3.1 64 268-335 28-96 (97)
68 TIGR03449 mycothiol_MshA UDP-N 92.9 11 0.00023 37.4 31.4 109 19-141 19-130 (405)
69 PLN00142 sucrose synthase 92.9 0.83 1.8E-05 49.2 10.7 105 28-141 319-437 (815)
70 PF01975 SurE: Survival protei 92.8 1 2.2E-05 40.0 9.7 44 10-54 1-44 (196)
71 PF12000 Glyco_trans_4_3: Gkyc 92.4 1.9 4.1E-05 37.3 10.5 91 35-142 1-95 (171)
72 TIGR02470 sucr_synth sucrose s 92.4 1.7 3.7E-05 46.7 12.3 124 9-141 255-414 (784)
73 PF04101 Glyco_tran_28_C: Glyc 92.1 0.015 3.1E-07 50.4 -3.0 41 354-399 107-147 (167)
74 cd03821 GT1_Bme6_like This fam 92.0 12 0.00025 35.8 28.4 30 19-48 13-42 (375)
75 TIGR02468 sucrsPsyn_pln sucros 91.6 2.4 5.1E-05 47.0 12.4 40 7-46 167-223 (1050)
76 PRK09922 UDP-D-galactose:(gluc 91.5 15 0.00031 35.9 22.1 38 10-47 1-43 (359)
77 cd03802 GT1_AviGT4_like This f 91.1 2 4.4E-05 41.0 10.6 105 10-141 1-113 (335)
78 TIGR02472 sucr_P_syn_N sucrose 91.1 2.1 4.5E-05 43.3 11.0 107 22-141 28-143 (439)
79 PRK00654 glgA glycogen synthas 90.8 2.5 5.5E-05 43.0 11.3 37 10-46 1-43 (466)
80 PRK01021 lpxB lipid-A-disaccha 90.7 24 0.00051 36.9 21.5 49 378-431 555-603 (608)
81 COG1817 Uncharacterized protei 90.0 4.6 9.9E-05 38.1 11.0 110 18-148 8-117 (346)
82 PF02684 LpxB: Lipid-A-disacch 89.8 16 0.00034 36.1 15.2 45 377-422 322-366 (373)
83 cd03819 GT1_WavL_like This fam 89.4 3.2 6.8E-05 40.0 10.4 96 20-142 10-108 (355)
84 cd03822 GT1_ecORF704_like This 89.1 21 0.00046 34.0 26.8 36 12-47 2-40 (366)
85 COG0801 FolK 7,8-dihydro-6-hyd 89.1 2.8 6.1E-05 35.6 8.2 74 282-392 3-77 (160)
86 PF13439 Glyco_transf_4: Glyco 88.4 1.5 3.3E-05 37.1 6.6 29 19-47 11-39 (177)
87 cd03791 GT1_Glycogen_synthase_ 86.9 7.8 0.00017 39.4 11.8 27 21-47 17-43 (476)
88 cd03811 GT1_WabH_like This fam 86.5 29 0.00062 32.6 25.4 36 12-47 2-39 (353)
89 PLN02275 transferase, transfer 86.1 18 0.00039 35.5 13.5 56 11-68 6-62 (371)
90 cd01635 Glycosyltransferase_GT 86.0 5.6 0.00012 35.1 9.2 26 19-44 12-37 (229)
91 PRK09814 beta-1,6-galactofuran 84.1 3 6.5E-05 40.4 6.8 71 341-429 260-331 (333)
92 cd04955 GT1_like_6 This family 83.8 42 0.0009 32.2 26.4 45 21-68 16-60 (363)
93 COG0496 SurE Predicted acid ph 83.0 5.3 0.00011 36.7 7.3 31 23-54 13-43 (252)
94 cd03812 GT1_CapH_like This fam 82.2 48 0.001 31.7 24.4 31 18-48 10-40 (358)
95 cd05844 GT1_like_7 Glycosyltra 81.9 50 0.0011 31.8 24.7 37 103-141 73-111 (367)
96 cd04946 GT1_AmsK_like This fam 81.8 33 0.00071 34.2 13.4 67 353-428 340-406 (407)
97 PRK02261 methylaspartate mutas 81.8 4.8 0.0001 33.5 6.2 60 8-68 2-61 (137)
98 PF08660 Alg14: Oligosaccharid 80.9 22 0.00047 30.7 10.2 115 14-143 2-129 (170)
99 COG3980 spsG Spore coat polysa 77.5 3.9 8.4E-05 38.0 4.6 94 10-143 1-101 (318)
100 cd02067 B12-binding B12 bindin 76.6 4.8 0.0001 32.3 4.6 38 11-48 1-38 (119)
101 cd03806 GT1_ALG11_like This fa 76.5 28 0.00062 34.8 11.1 111 21-143 15-137 (419)
102 cd03786 GT1_UDP-GlcNAc_2-Epime 76.0 11 0.00024 36.6 7.9 33 14-46 3-36 (363)
103 PRK13933 stationary phase surv 75.7 60 0.0013 30.1 11.9 28 26-54 16-43 (253)
104 cd03809 GT1_mtfB_like This fam 75.3 76 0.0017 30.1 21.6 29 20-48 15-43 (365)
105 TIGR00087 surE 5'/3'-nucleotid 74.4 33 0.00072 31.6 9.9 29 25-54 15-43 (244)
106 PRK13931 stationary phase surv 73.6 38 0.00082 31.5 10.1 29 26-54 16-47 (261)
107 PRK10422 lipopolysaccharide co 72.5 52 0.0011 32.0 11.6 46 9-54 5-52 (352)
108 cd00532 MGS-like MGS-like doma 72.0 25 0.00055 27.8 7.7 85 22-141 10-105 (112)
109 TIGR03568 NeuC_NnaA UDP-N-acet 71.5 44 0.00095 32.8 10.8 113 14-143 4-125 (365)
110 PLN02846 digalactosyldiacylgly 71.3 6.1 0.00013 40.1 4.7 40 8-47 3-47 (462)
111 smart00851 MGS MGS-like domain 70.8 31 0.00067 26.0 7.6 80 26-140 2-90 (90)
112 PF02142 MGS: MGS-like domain 69.9 5 0.00011 30.9 3.0 85 26-140 2-95 (95)
113 PRK13932 stationary phase surv 69.4 47 0.001 30.8 9.7 45 8-54 4-48 (257)
114 PRK00346 surE 5'(3')-nucleotid 68.6 49 0.0011 30.6 9.6 30 24-54 14-43 (250)
115 TIGR00236 wecB UDP-N-acetylglu 68.4 39 0.00085 32.9 9.8 110 11-141 2-116 (365)
116 PF02951 GSH-S_N: Prokaryotic 67.5 8.5 0.00018 31.1 3.9 38 10-47 1-41 (119)
117 PF02310 B12-binding: B12 bind 67.4 12 0.00026 29.9 5.0 38 10-47 1-38 (121)
118 cd02070 corrinoid_protein_B12- 67.4 16 0.00034 32.6 6.1 44 9-52 82-125 (201)
119 PRK13935 stationary phase surv 67.3 73 0.0016 29.5 10.5 29 25-54 15-43 (253)
120 cd03807 GT1_WbnK_like This fam 65.6 1.2E+02 0.0026 28.4 28.8 32 17-48 9-40 (365)
121 TIGR02095 glgA glycogen/starch 65.4 9.1 0.0002 39.0 4.8 38 10-47 1-44 (473)
122 TIGR02370 pyl_corrinoid methyl 64.4 20 0.00043 31.8 6.1 60 8-68 83-142 (197)
123 PRK15427 colanic acid biosynth 64.1 1.6E+02 0.0034 29.3 14.8 33 13-46 6-38 (406)
124 COG2874 FlaH Predicted ATPases 63.8 22 0.00049 31.9 6.1 37 12-48 31-67 (235)
125 PRK13934 stationary phase surv 63.6 74 0.0016 29.7 9.8 30 24-54 14-43 (266)
126 COG1703 ArgK Putative periplas 63.5 26 0.00056 33.1 6.7 39 11-49 53-91 (323)
127 TIGR03087 stp1 sugar transfera 63.3 9.5 0.00021 37.8 4.3 32 15-47 8-40 (397)
128 cd03804 GT1_wbaZ_like This fam 63.2 28 0.00061 33.5 7.6 16 381-397 312-327 (351)
129 cd04951 GT1_WbdM_like This fam 62.9 8 0.00017 37.2 3.7 35 12-46 2-38 (360)
130 PF02441 Flavoprotein: Flavopr 62.1 13 0.00029 30.3 4.3 42 10-52 1-42 (129)
131 PRK10916 ADP-heptose:LPS hepto 61.8 69 0.0015 31.1 10.0 45 10-54 1-47 (348)
132 COG1618 Predicted nucleotide k 61.7 35 0.00075 29.3 6.6 55 9-68 5-59 (179)
133 PRK05595 replicative DNA helic 59.2 35 0.00077 34.5 7.6 42 11-52 203-245 (444)
134 TIGR02201 heptsyl_trn_III lipo 58.8 1.1E+02 0.0023 29.6 10.8 103 11-138 1-106 (344)
135 COG0003 ArsA Predicted ATPase 57.9 90 0.002 30.1 9.7 39 10-48 2-41 (322)
136 PRK06067 flagellar accessory p 56.4 40 0.00086 30.6 6.9 42 9-50 25-66 (234)
137 cd01424 MGS_CPS_II Methylglyox 56.4 77 0.0017 24.8 7.7 84 21-140 10-100 (110)
138 cd02069 methionine_synthase_B1 56.2 31 0.00067 31.0 5.9 60 8-68 87-146 (213)
139 PF04413 Glycos_transf_N: 3-De 56.0 45 0.00098 29.2 6.8 100 11-143 22-126 (186)
140 cd03799 GT1_amsK_like This is 55.8 1.8E+02 0.004 27.4 27.6 36 12-47 2-38 (355)
141 PRK06321 replicative DNA helic 55.3 69 0.0015 32.7 8.9 42 11-52 228-270 (472)
142 PF13844 Glyco_transf_41: Glyc 54.7 2.1E+02 0.0046 29.1 12.1 41 279-319 283-323 (468)
143 cd03792 GT1_Trehalose_phosphor 53.3 45 0.00098 32.5 7.2 30 18-47 10-39 (372)
144 PRK14098 glycogen synthase; Pr 53.1 23 0.0005 36.3 5.2 41 7-47 3-49 (489)
145 PF12146 Hydrolase_4: Putative 51.7 38 0.00083 25.0 4.9 34 10-43 16-49 (79)
146 COG0763 LpxB Lipid A disacchar 51.7 46 0.001 32.6 6.5 54 378-432 327-380 (381)
147 PRK09165 replicative DNA helic 50.8 60 0.0013 33.4 7.7 42 11-52 219-275 (497)
148 PLN02939 transferase, transfer 50.6 29 0.00063 38.4 5.5 43 5-47 477-525 (977)
149 PLN02316 synthase/transferase 50.3 31 0.00066 38.7 5.8 53 379-434 982-1034(1036)
150 cd02071 MM_CoA_mut_B12_BD meth 50.1 32 0.0007 27.7 4.6 40 11-50 1-40 (122)
151 TIGR02149 glgA_Coryne glycogen 49.6 2.5E+02 0.0055 27.1 27.6 44 353-401 310-357 (388)
152 PF04127 DFP: DNA / pantothena 48.2 19 0.00041 31.6 3.2 30 16-47 24-53 (185)
153 PRK08305 spoVFB dipicolinate s 47.8 23 0.0005 31.4 3.6 39 10-48 6-44 (196)
154 TIGR00715 precor6x_red precorr 45.9 1.6E+02 0.0035 27.3 9.1 23 26-48 12-34 (256)
155 COG1066 Sms Predicted ATP-depe 45.0 1.1E+02 0.0025 30.4 8.1 43 11-54 95-137 (456)
156 PRK07773 replicative DNA helic 44.6 97 0.0021 34.5 8.7 42 11-52 219-261 (886)
157 COG2910 Putative NADH-flavin r 44.6 21 0.00045 31.3 2.7 18 28-45 15-32 (211)
158 PRK05636 replicative DNA helic 44.3 57 0.0012 33.7 6.3 42 11-52 267-309 (505)
159 KOG2941 Beta-1,4-mannosyltrans 43.7 3.2E+02 0.007 26.7 11.5 58 7-68 10-69 (444)
160 TIGR02195 heptsyl_trn_II lipop 43.2 1.2E+02 0.0027 29.0 8.4 44 11-54 1-46 (334)
161 COG2185 Sbm Methylmalonyl-CoA 43.1 42 0.0009 28.0 4.2 39 8-46 11-49 (143)
162 COG1797 CobB Cobyrinic acid a, 42.6 1.1E+02 0.0023 30.7 7.6 32 12-43 3-35 (451)
163 KOG0202 Ca2+ transporting ATPa 42.5 2.2E+02 0.0049 31.1 10.2 142 280-436 571-752 (972)
164 TIGR02655 circ_KaiC circadian 42.5 3.6E+02 0.0077 27.7 11.9 46 9-54 263-308 (484)
165 PRK14099 glycogen synthase; Pr 41.7 44 0.00095 34.3 5.1 39 9-47 3-47 (485)
166 PF08323 Glyco_transf_5: Starc 41.2 24 0.00052 32.5 2.9 27 21-47 17-43 (245)
167 cd01121 Sms Sms (bacterial rad 40.9 2.8E+02 0.0061 27.3 10.4 42 12-53 85-126 (372)
168 PF05225 HTH_psq: helix-turn-h 40.5 45 0.00098 21.6 3.3 26 381-406 1-26 (45)
169 PF13499 EF-hand_7: EF-hand do 40.4 26 0.00056 24.4 2.3 53 375-430 12-65 (66)
170 COG1484 DnaC DNA replication p 40.1 35 0.00077 31.6 3.8 46 9-54 105-150 (254)
171 PF06925 MGDG_synth: Monogalac 39.5 79 0.0017 27.0 5.7 44 98-143 75-124 (169)
172 TIGR02852 spore_dpaB dipicolin 38.5 34 0.00074 30.1 3.2 37 11-47 2-38 (187)
173 PRK07313 phosphopantothenoylcy 38.3 31 0.00066 30.2 2.9 41 10-51 2-42 (182)
174 cd05022 S-100A13 S-100A13: S-1 36.7 53 0.0011 24.9 3.6 57 376-436 22-78 (89)
175 TIGR02193 heptsyl_trn_I lipopo 36.7 54 0.0012 31.3 4.7 44 11-54 1-46 (319)
176 PF04244 DPRP: Deoxyribodipyri 36.1 34 0.00074 31.0 2.9 25 22-46 47-71 (224)
177 PF13524 Glyco_trans_1_2: Glyc 36.1 1.2E+02 0.0027 22.4 5.7 21 381-402 48-68 (92)
178 PRK15484 lipopolysaccharide 1, 36.0 4.3E+02 0.0092 25.9 15.7 49 380-433 329-377 (380)
179 PF13450 NAD_binding_8: NAD(P) 35.9 44 0.00096 23.7 3.0 20 27-46 9-28 (68)
180 PRK03359 putative electron tra 34.8 81 0.0018 29.3 5.3 40 103-144 103-148 (256)
181 PRK12342 hypothetical protein; 34.8 79 0.0017 29.3 5.1 40 103-144 100-145 (254)
182 TIGR03878 thermo_KaiC_2 KaiC d 34.2 2.7E+02 0.006 25.7 8.8 40 10-49 37-76 (259)
183 PRK10964 ADP-heptose:LPS hepto 33.6 61 0.0013 31.0 4.5 44 10-53 1-46 (322)
184 cd06559 Endonuclease_V Endonuc 33.3 48 0.001 29.7 3.4 40 104-143 83-129 (208)
185 COG3914 Spy Predicted O-linked 33.0 94 0.002 32.2 5.6 42 278-319 427-468 (620)
186 cd05030 calgranulins Calgranul 32.9 89 0.0019 23.5 4.4 60 377-439 24-85 (88)
187 PF01210 NAD_Gly3P_dh_N: NAD-d 32.5 42 0.00091 28.4 2.8 21 27-47 12-32 (157)
188 TIGR00421 ubiX_pad polyprenyl 32.0 40 0.00086 29.5 2.6 40 12-52 2-41 (181)
189 TIGR02699 archaeo_AfpA archaeo 31.9 53 0.0011 28.5 3.3 38 12-50 2-41 (174)
190 cd08806 CARD_CARD14_CARMA2 Cas 31.9 1.3E+02 0.0029 22.5 4.9 37 389-432 36-75 (86)
191 TIGR03877 thermo_KaiC_1 KaiC d 31.7 3.9E+02 0.0085 24.1 11.1 44 9-52 21-64 (237)
192 cd02065 B12-binding_like B12 b 31.0 96 0.0021 24.6 4.7 37 12-48 2-38 (125)
193 PRK13604 luxD acyl transferase 30.9 1.2E+02 0.0026 29.0 5.8 35 9-43 36-70 (307)
194 cd01840 SGNH_hydrolase_yrhL_li 30.7 75 0.0016 26.4 4.1 36 280-316 51-86 (150)
195 cd00213 S-100 S-100: S-100 dom 30.5 67 0.0014 23.9 3.4 62 376-438 23-84 (88)
196 KOG3339 Predicted glycosyltran 30.1 3.3E+02 0.0072 23.9 7.6 26 10-36 39-64 (211)
197 PLN02859 glutamine-tRNA ligase 29.6 71 0.0015 34.6 4.4 69 356-433 104-180 (788)
198 PF09314 DUF1972: Domain of un 29.6 93 0.002 27.3 4.5 41 24-68 21-62 (185)
199 PF00070 Pyr_redox: Pyridine n 29.2 80 0.0017 22.9 3.6 23 25-47 10-32 (80)
200 COG1422 Predicted membrane pro 29.0 2E+02 0.0043 25.5 6.2 41 387-429 62-105 (201)
201 PRK09620 hypothetical protein; 28.8 54 0.0012 29.8 3.0 27 18-46 26-52 (229)
202 TIGR00745 apbA_panE 2-dehydrop 28.8 47 0.001 31.1 2.8 19 28-46 5-23 (293)
203 cd03412 CbiK_N Anaerobic cobal 28.7 1.1E+02 0.0023 25.0 4.4 38 281-318 2-41 (127)
204 COG0381 WecB UDP-N-acetylgluco 28.4 3.8E+02 0.0083 26.5 8.8 111 13-141 6-122 (383)
205 PF04493 Endonuclease_5: Endon 28.4 92 0.002 27.9 4.3 43 102-144 77-126 (206)
206 PRK09302 circadian clock prote 28.1 2.7E+02 0.0059 28.7 8.4 45 9-53 273-317 (509)
207 cd05029 S-100A6 S-100A6: S-100 27.9 57 0.0012 24.6 2.5 58 377-439 26-85 (88)
208 PF12363 DUF3647: Phage protei 27.8 1.4E+02 0.0031 23.7 4.9 63 357-426 48-110 (113)
209 PRK14092 2-amino-4-hydroxy-6-h 27.5 1.4E+02 0.0029 25.7 5.0 30 279-308 6-35 (163)
210 PRK13982 bifunctional SbtC-lik 27.4 88 0.0019 31.9 4.5 39 9-47 256-306 (475)
211 PRK04328 hypothetical protein; 27.1 4.9E+02 0.011 23.8 10.9 44 9-52 23-66 (249)
212 PF02374 ArsA_ATPase: Anion-tr 27.1 85 0.0018 30.0 4.2 40 10-49 1-41 (305)
213 PRK11519 tyrosine kinase; Prov 27.0 3.9E+02 0.0085 29.0 9.6 39 10-48 526-566 (719)
214 COG2179 Predicted hydrolase of 27.0 1.6E+02 0.0035 25.3 5.2 80 268-371 49-135 (175)
215 PRK05920 aromatic acid decarbo 26.8 76 0.0016 28.3 3.5 42 10-52 4-45 (204)
216 smart00526 H15 Domain in histo 26.7 99 0.0022 21.7 3.5 16 415-430 20-35 (66)
217 TIGR01501 MthylAspMutase methy 26.6 1.5E+02 0.0033 24.5 5.0 56 10-67 2-58 (134)
218 PF10649 DUF2478: Protein of u 26.6 4.1E+02 0.0088 22.7 9.3 120 15-145 4-133 (159)
219 cd03786 GT1_UDP-GlcNAc_2-Epime 26.4 3.1E+02 0.0067 26.3 8.2 39 101-141 77-118 (363)
220 PRK14089 ipid-A-disaccharide s 26.3 91 0.002 30.4 4.3 69 353-428 265-345 (347)
221 PF07355 GRDB: Glycine/sarcosi 26.1 1.3E+02 0.0029 29.1 5.1 44 98-143 66-119 (349)
222 KOG1532 GTPase XAB1, interacts 25.9 1.9E+02 0.004 27.3 5.8 40 8-47 18-57 (366)
223 TIGR00347 bioD dethiobiotin sy 25.8 1.1E+02 0.0024 25.8 4.4 28 16-43 5-32 (166)
224 KOG2368 Hydroxymethylglutaryl- 25.4 1.9E+02 0.004 26.2 5.5 49 294-368 38-87 (316)
225 PLN00016 RNA-binding protein; 25.2 93 0.002 30.6 4.2 38 9-46 52-89 (378)
226 PRK11199 tyrA bifunctional cho 24.9 4.6E+02 0.01 25.8 9.0 33 9-46 98-131 (374)
227 PRK06732 phosphopantothenate-- 24.9 76 0.0016 28.9 3.2 30 14-45 19-48 (229)
228 TIGR00236 wecB UDP-N-acetylglu 24.6 86 0.0019 30.5 3.8 44 381-429 320-363 (365)
229 PF13833 EF-hand_8: EF-hand do 24.6 42 0.00091 22.2 1.2 51 377-432 2-52 (54)
230 cd02034 CooC The accessory pro 24.1 1.8E+02 0.0038 23.2 4.9 37 11-47 1-37 (116)
231 PRK12921 2-dehydropantoate 2-r 24.0 1.1E+02 0.0024 28.8 4.4 31 10-45 1-31 (305)
232 PRK06029 3-octaprenyl-4-hydrox 24.0 81 0.0018 27.7 3.1 43 10-53 2-45 (185)
233 PF01380 SIS: SIS domain SIS d 24.0 2.5E+02 0.0054 22.2 6.0 32 19-50 62-93 (131)
234 cd03789 GT1_LPS_heptosyltransf 23.5 93 0.002 29.0 3.7 44 11-54 1-46 (279)
235 PRK06249 2-dehydropantoate 2-r 23.4 93 0.002 29.7 3.7 34 9-47 5-38 (313)
236 COG2894 MinD Septum formation 23.3 1.5E+02 0.0033 26.9 4.6 38 10-47 2-41 (272)
237 PF05673 DUF815: Protein of un 23.3 2.8E+02 0.006 25.6 6.4 60 367-435 184-249 (249)
238 cd08807 CARD_CARD10_CARMA3 Cas 23.3 2.1E+02 0.0046 21.4 4.6 37 389-432 36-75 (86)
239 COG1578 Uncharacterized conser 23.2 3.3E+02 0.0071 25.5 6.8 53 384-436 56-137 (285)
240 PRK03094 hypothetical protein; 23.2 75 0.0016 23.6 2.3 20 26-45 10-29 (80)
241 COG0052 RpsB Ribosomal protein 23.0 64 0.0014 29.6 2.3 33 114-146 156-190 (252)
242 COG4088 Predicted nucleotide k 22.9 1.1E+02 0.0025 27.4 3.7 34 12-45 4-37 (261)
243 PF06180 CbiK: Cobalt chelatas 22.8 1.2E+02 0.0025 28.3 4.1 39 281-319 2-43 (262)
244 COG0162 TyrS Tyrosyl-tRNA synt 22.8 87 0.0019 31.2 3.4 36 10-46 35-73 (401)
245 PF12695 Abhydrolase_5: Alpha/ 22.7 2.1E+02 0.0045 22.9 5.3 33 13-45 2-34 (145)
246 TIGR02700 flavo_MJ0208 archaeo 22.5 1.1E+02 0.0023 28.0 3.7 34 18-51 7-43 (234)
247 PRK06849 hypothetical protein; 22.3 1.7E+02 0.0036 28.9 5.4 35 9-47 4-38 (389)
248 cd00861 ProRS_anticodon_short 22.2 2.4E+02 0.0052 20.9 5.2 35 10-44 2-38 (94)
249 PRK05234 mgsA methylglyoxal sy 22.2 4.6E+02 0.01 21.8 10.5 97 10-143 5-114 (142)
250 PRK14619 NAD(P)H-dependent gly 22.2 2.1E+02 0.0045 27.2 5.9 34 8-46 3-36 (308)
251 TIGR02113 coaC_strep phosphopa 22.0 69 0.0015 27.8 2.3 37 11-48 2-38 (177)
252 PF03698 UPF0180: Uncharacteri 21.8 80 0.0017 23.5 2.2 23 25-47 9-31 (80)
253 TIGR00288 conserved hypothetic 21.7 2.1E+02 0.0046 24.4 5.0 42 19-68 114-156 (160)
254 PRK04940 hypothetical protein; 21.6 2.4E+02 0.0053 24.6 5.5 32 114-145 60-92 (180)
255 PF02558 ApbA: Ketopantoate re 21.5 87 0.0019 25.9 2.8 20 28-47 12-31 (151)
256 PF05728 UPF0227: Uncharacteri 21.5 2E+02 0.0044 25.2 5.2 45 102-146 47-92 (187)
257 PF07015 VirC1: VirC1 protein; 21.3 2.7E+02 0.0058 25.4 5.9 33 18-50 11-43 (231)
258 COG2120 Uncharacterized protei 21.3 1.8E+02 0.0039 26.6 4.9 37 9-45 10-46 (237)
259 cd01421 IMPCH Inosine monophos 21.2 4.2E+02 0.0091 23.3 6.9 37 24-67 11-47 (187)
260 PRK12825 fabG 3-ketoacyl-(acyl 21.0 1.9E+02 0.0041 25.7 5.2 38 1-45 1-38 (249)
261 cd05027 S-100B S-100B: S-100B 20.9 1.4E+02 0.003 22.5 3.5 58 377-439 23-85 (88)
262 PRK06522 2-dehydropantoate 2-r 20.4 1.1E+02 0.0023 28.9 3.4 30 11-45 2-31 (304)
263 cd01965 Nitrogenase_MoFe_beta_ 20.4 1.5E+02 0.0032 29.9 4.6 31 106-141 365-395 (428)
264 COG0300 DltE Short-chain dehyd 20.3 98 0.0021 28.9 3.0 32 11-45 7-38 (265)
265 PF12179 IKKbetaNEMObind: I-ka 20.2 60 0.0013 20.2 1.1 23 403-425 12-34 (38)
266 PF14626 RNase_Zc3h12a_2: Zc3h 20.0 93 0.002 25.0 2.3 28 23-50 9-36 (122)
No 1
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.5e-61 Score=480.91 Aligned_cols=423 Identities=53% Similarity=0.941 Sum_probs=327.1
Q ss_pred CCCCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcc
Q 044731 1 MSSCSNSRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVE 80 (443)
Q Consensus 1 ~~~~~~~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 80 (443)
|-+.....++||+++|+|++||++||++||+.|+.+|+.|||++|+.+.+++.+......+++++.+|++..+++|++.+
T Consensus 1 ~~~~~~~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lPdG~~ 80 (477)
T PLN02863 1 MTELNKPAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIPSGVE 80 (477)
T ss_pred CcccccCCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCCCCCc
Confidence 44444456789999999999999999999999999999999999998877665532212468888888776567888776
Q ss_pred cccccCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccC
Q 044731 81 NVKELGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTG 160 (443)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~ 160 (443)
....++.+....+..++..+.+.+.+++++...+++|||+|.+..|+..+|+++|||.+.|++++++.++.+++++....
T Consensus 81 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~ 160 (477)
T PLN02863 81 NVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMP 160 (477)
T ss_pred ChhhcchhhHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccc
Confidence 55443323344566666677788888887643367999999999999999999999999999999999999888754311
Q ss_pred C----CCCCCce---ecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHH
Q 044731 161 V----VKSLDVV---EFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDY 233 (443)
Q Consensus 161 ~----~~~~~~~---~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~ 233 (443)
. ..+.+.+ .+||+|. ++..++|.++...... ....+.+.+.......+++ +++|||++||+.++++
T Consensus 161 ~~~~~~~~~~~~~~~~iPg~~~---~~~~dlp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--vlvNTf~eLE~~~~~~ 233 (477)
T PLN02863 161 TKINPDDQNEILSFSKIPNCPK---YPWWQISSLYRSYVEG--DPAWEFIKDSFRANIASWG--LVVNSFTELEGIYLEH 233 (477)
T ss_pred ccccccccccccccCCCCCCCC---cChHhCchhhhccCcc--chHHHHHHHHHhhhccCCE--EEEecHHHHHHHHHHH
Confidence 0 0111122 3566664 7888888766532222 3344444444444556778 9999999999999999
Q ss_pred HHHhcCCCceeeeccccCCCCCC----CCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCC
Q 044731 234 LKRKMGHDRVFGVGPLSLLGPES----TRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSG 309 (443)
Q Consensus 234 ~~~~~~~~~v~~vGpl~~~~~~~----~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~ 309 (443)
++..++.+++++|||+++..... ..+......+ ++|.+|||+++++|||||||||+..++.+++++++.+|+.++
T Consensus 234 ~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~-~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~ 312 (477)
T PLN02863 234 LKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSV-DDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSG 312 (477)
T ss_pred HHhhcCCCCeEEeCCCcccccccccccccCCcccccH-HHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCC
Confidence 98865214799999998543210 0010001124 679999999988999999999999999999999999999999
Q ss_pred CceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------
Q 044731 310 IRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------------------- 352 (443)
Q Consensus 310 ~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------------------- 352 (443)
++|||+++..... +.....+|++|.+|+.++|+++.+|+||
T Consensus 313 ~~flw~~~~~~~~--~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~ 390 (477)
T PLN02863 313 VHFIWCVKEPVNE--ESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMA 390 (477)
T ss_pred CcEEEEECCCccc--ccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCcc
Confidence 9999999853210 0112358999999999999988799999
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESL-SQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl-~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 431 (443)
+||+.||+++++.||+|+++..+..+.++.++++++|+++| ++ ++||+||+++++.+++|+++||||++++++|++++
T Consensus 391 ~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~-~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i 469 (477)
T PLN02863 391 ADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSEN-QVERERAKELRRAALDAIKERGSSVKDLDGFVKHV 469 (477)
T ss_pred ccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 99999999999889999999642224579999999999999 56 89999999999999999999999999999999999
Q ss_pred Hhc
Q 044731 432 RKL 434 (443)
Q Consensus 432 ~~~ 434 (443)
.+.
T Consensus 470 ~~~ 472 (477)
T PLN02863 470 VEL 472 (477)
T ss_pred HHh
Confidence 764
No 2
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=8.5e-60 Score=470.83 Aligned_cols=419 Identities=31% Similarity=0.520 Sum_probs=314.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccC----CCCeeEEEeCCCCC-CCCCCCccc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDA----RPAIQTLVLPFPSH-PSVPAGVEN 81 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~----~~~i~~~~l~~~~~-~~~~~~~~~ 81 (443)
.++.|++++|+|++||++||++||+.|+.||+.|||++|+.+..++.+.... +..|+|+.+|++.. +++|++.+.
T Consensus 6 ~~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~ 85 (491)
T PLN02534 6 AKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCEN 85 (491)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccc
Confidence 3457999999999999999999999999999999999998876655543211 12489999987743 578876554
Q ss_pred ccccCC-CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhccc-
Q 044731 82 VKELGN-RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHT- 159 (443)
Q Consensus 82 ~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~- 159 (443)
...++. .....+...+..+.+.+++++++...+++|||+|.+..|+..+|+++|||.+.|++++++..+.++++....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~ 165 (491)
T PLN02534 86 LDTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNA 165 (491)
T ss_pred cccCCcHHHHHHHHHHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcc
Confidence 333222 233445555567788899988864337899999999999999999999999999999988877655433221
Q ss_pred --CCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHh
Q 044731 160 --GVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRK 237 (443)
Q Consensus 160 --~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~ 237 (443)
....+..++.+|++|....++..++|.++... .....+..........+++ +++|||++||+.++++++..
T Consensus 166 ~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~-----~~~~~~~~~~~~~~~~a~~--vlvNTf~eLE~~~l~~l~~~ 238 (491)
T PLN02534 166 HLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSL-----PDLDDVRNKMREAESTAFG--VVVNSFNELEHGCAEAYEKA 238 (491)
T ss_pred cccCCCCCceeecCCCCccccccHHHCChhhcCc-----ccHHHHHHHHHhhcccCCE--EEEecHHHhhHHHHHHHHhh
Confidence 11122235567888754446666777654321 1112222222222334668 99999999999999999887
Q ss_pred cCCCceeeeccccCCCCCC--C--CCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceE
Q 044731 238 MGHDRVFGVGPLSLLGPES--T--RGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFL 313 (443)
Q Consensus 238 ~~~~~v~~vGpl~~~~~~~--~--~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~l 313 (443)
++ +++++|||++...... . .+.....+. ++|.+|||+++++|||||||||...++++++.+++.+|+.++++||
T Consensus 239 ~~-~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~-~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~fl 316 (491)
T PLN02534 239 IK-KKVWCVGPVSLCNKRNLDKFERGNKASIDE-TQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFI 316 (491)
T ss_pred cC-CcEEEECcccccccccccccccCCccccch-HHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEE
Confidence 76 7899999998532110 0 010001123 5799999999989999999999999999999999999999999999
Q ss_pred EEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccch
Q 044731 314 WVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQF 356 (443)
Q Consensus 314 w~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ~ 356 (443)
|+++.+.... +.....+|++|.+++.++|+++.+|+|| +||+
T Consensus 317 W~~r~~~~~~-~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~ 395 (491)
T PLN02534 317 WVIKTGEKHS-ELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQF 395 (491)
T ss_pred EEEecCcccc-chhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHH
Confidence 9999531100 0011246899998988889888799999 9999
Q ss_pred hhHHHHHhhcceeEEeecC-------CC--C-CCCHHHHHHHHHHHhc---Cc-hHHHHHHHHHHHHHHHHHhcCCChHH
Q 044731 357 VNARLLVDDLRVAVLVCEG-------GD--S-VPDSDELGKVIGESLS---QC-GETKIKARELRDKALAAVKSGGSSTR 422 (443)
Q Consensus 357 ~na~~v~~~~g~G~~l~~~-------~~--~-~~t~e~l~~ai~~vl~---~~-~~yr~~a~~l~~~~r~a~~~gg~s~~ 422 (443)
.||+++++.||+|+++... .. + .+++|+|+++|+++|. ++ +.+|+||++|++.+++|+++||||++
T Consensus 396 ~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~ 475 (491)
T PLN02534 396 LNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHI 475 (491)
T ss_pred HHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 9999999999999998421 01 1 4899999999999996 22 79999999999999999999999999
Q ss_pred HHHHHHHHHHhcc
Q 044731 423 DLETLVQELRKLR 435 (443)
Q Consensus 423 ~~~~~~~~~~~~~ 435 (443)
|+++|++.+.+.+
T Consensus 476 nl~~fv~~i~~~~ 488 (491)
T PLN02534 476 NLSILIQDVLKQQ 488 (491)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999997543
No 3
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=4e-59 Score=464.24 Aligned_cols=401 Identities=24% Similarity=0.378 Sum_probs=308.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHH-hCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLS-LKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELG 86 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~-~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 86 (443)
.+.||+++|+|++||++||++||+.|+ .+|++|||++|+.+.+++.+......+++++.+|++..+++++...
T Consensus 4 ~~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~~~~------ 77 (481)
T PLN02992 4 TKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVDPSA------ 77 (481)
T ss_pred CCcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCCCCc------
Confidence 357999999999999999999999998 7999999999998765543321112368899888654445542110
Q ss_pred CCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccC-CCC--
Q 044731 87 NRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTG-VVK-- 163 (443)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~-~~~-- 163 (443)
+....+......+.+.+++++++...+++|||+|.+..|+..+|+++|||.+.|++++++.++.+.+++.... ...
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~ 156 (481)
T PLN02992 78 -HVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEH 156 (481)
T ss_pred -cHHHHHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccccccc
Confidence 1112333344566788888887643378999999999999999999999999999999988877766653211 110
Q ss_pred --CCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHh----
Q 044731 164 --SLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRK---- 237 (443)
Q Consensus 164 --~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~---- 237 (443)
+..++.+|++|. ++..++|..+... . ...+..+.+......++++ +++|||++||+.++++++..
T Consensus 157 ~~~~~~~~iPg~~~---l~~~dlp~~~~~~--~--~~~~~~~~~~~~~~~~a~g--vlvNTf~eLE~~~l~~l~~~~~~~ 227 (481)
T PLN02992 157 TVQRKPLAMPGCEP---VRFEDTLDAYLVP--D--EPVYRDFVRHGLAYPKADG--ILVNTWEEMEPKSLKSLQDPKLLG 227 (481)
T ss_pred ccCCCCcccCCCCc---cCHHHhhHhhcCC--C--cHHHHHHHHHHHhcccCCE--EEEechHHHhHHHHHHHhhccccc
Confidence 112345777775 6777777544321 1 3344555556666777888 99999999999999988752
Q ss_pred --cCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEE
Q 044731 238 --MGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWV 315 (443)
Q Consensus 238 --~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~ 315 (443)
.. +++++|||+++.... ...+ .+|.+|||+++++|||||||||+..++.+++.+++.+|+.++++|||+
T Consensus 228 ~~~~-~~v~~VGPl~~~~~~-------~~~~-~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~ 298 (481)
T PLN02992 228 RVAR-VPVYPIGPLCRPIQS-------SKTD-HPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWV 298 (481)
T ss_pred cccC-CceEEecCccCCcCC-------Ccch-HHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 13 479999999864221 1234 679999999988999999999999999999999999999999999999
Q ss_pred EeCCcccc-------------CCCCCCCCchhHHHHhhcCceEeecCCCc------------------------------
Q 044731 316 VKTSVIHA-------------EGNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------------ 352 (443)
Q Consensus 316 ~~~~~~~~-------------~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------------ 352 (443)
++.....+ .+...+.+|+||.+|++++|+++.+|+||
T Consensus 299 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP 378 (481)
T PLN02992 299 VRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVP 378 (481)
T ss_pred EeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCC
Confidence 98531100 00012358999999999999998899999
Q ss_pred -------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHH--hcCCChH
Q 044731 353 -------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQC--GETKIKARELRDKALAAV--KSGGSST 421 (443)
Q Consensus 353 -------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~--~~yr~~a~~l~~~~r~a~--~~gg~s~ 421 (443)
+||+.||+++++.||+|+.++.. .+.++.++|+++|+++|.++ +.||+||+++++.+++|+ ++||||+
T Consensus 379 ~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~ 457 (481)
T PLN02992 379 MIAWPLFAEQNMNAALLSDELGIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAH 457 (481)
T ss_pred EEecCccchhHHHHHHHHHHhCeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchH
Confidence 99999999998777999999741 13689999999999999764 699999999999999999 4699999
Q ss_pred HHHHHHHHHHHhc
Q 044731 422 RDLETLVQELRKL 434 (443)
Q Consensus 422 ~~~~~~~~~~~~~ 434 (443)
+|+++|++.+..-
T Consensus 458 ~~l~~~v~~~~~~ 470 (481)
T PLN02992 458 ESLCRVTKECQRF 470 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998654
No 4
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.7e-58 Score=459.20 Aligned_cols=393 Identities=22% Similarity=0.351 Sum_probs=298.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCC-ccccccc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAG-VENVKEL 85 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~-~~~~~~~ 85 (443)
+.+.||+++|++++||++||++||+.|+.||+.|||++|+.+... .... ..+|++..+| +++|++ .+..
T Consensus 5 ~~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~--~~~~-~~~i~~~~ip----~glp~~~~~~~--- 74 (451)
T PLN02410 5 PARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS--PSDD-FTDFQFVTIP----ESLPESDFKNL--- 74 (451)
T ss_pred CCCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccc--cccC-CCCeEEEeCC----CCCCccccccc---
Confidence 356799999999999999999999999999999999999876421 1110 1368888877 456653 2211
Q ss_pred CCCChHHHHHHH-hhhhHHHHHHHHhC----CCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcc--
Q 044731 86 GNRGNLPIMSAL-GKLYDPIIQWFHSH----ANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNH-- 158 (443)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~ll~~~----~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~-- 158 (443)
... .+...+ ..+.+.+++++++. ..+++|||+|.+..|+..+|+++|||.+.|++++++.++.+++++.+
T Consensus 75 --~~~-~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~ 151 (451)
T PLN02410 75 --GPI-EFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYA 151 (451)
T ss_pred --CHH-HHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHh
Confidence 111 232322 34555666665542 23579999999999999999999999999999999888777654322
Q ss_pred cC---C-CC--CCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHH
Q 044731 159 TG---V-VK--SLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLD 232 (443)
Q Consensus 159 ~~---~-~~--~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~ 232 (443)
.+ . .. +.....+|++|+ ++..++|.+.... . ......+.... ...++++ +++|||++||+.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~iPg~~~---~~~~dlp~~~~~~--~--~~~~~~~~~~~-~~~~~~~--vlvNTf~eLE~~~~~ 221 (451)
T PLN02410 152 NNVLAPLKEPKGQQNELVPEFHP---LRCKDFPVSHWAS--L--ESIMELYRNTV-DKRTASS--VIINTASCLESSSLS 221 (451)
T ss_pred ccCCCCccccccCccccCCCCCC---CChHHCcchhcCC--c--HHHHHHHHHHh-hcccCCE--EEEeChHHhhHHHHH
Confidence 10 0 11 112234677765 6667777543211 1 22333332222 3456788 999999999999999
Q ss_pred HHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCce
Q 044731 233 YLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRF 312 (443)
Q Consensus 233 ~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~ 312 (443)
+++...+ +++++|||+++.... +......+ .+|.+|||+++++|||||||||...++.+++.+++.||+.++++|
T Consensus 222 ~l~~~~~-~~v~~vGpl~~~~~~---~~~~~~~~-~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~F 296 (451)
T PLN02410 222 RLQQQLQ-IPVYPIGPLHLVASA---PTSLLEEN-KSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQF 296 (451)
T ss_pred HHHhccC-CCEEEecccccccCC---Cccccccc-hHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCe
Confidence 9988776 789999999864321 00101223 579999999988999999999999999999999999999999999
Q ss_pred EEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccc
Q 044731 313 LWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQ 355 (443)
Q Consensus 313 lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ 355 (443)
||+++.+...+ ++....+|++|.+|+++|++|+ +|+|| +||
T Consensus 297 lWv~r~~~~~~-~~~~~~lp~~f~er~~~~g~v~-~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ 374 (451)
T PLN02410 297 LWVIRPGSVRG-SEWIESLPKEFSKIISGRGYIV-KWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQ 374 (451)
T ss_pred EEEEccCcccc-cchhhcCChhHHHhccCCeEEE-ccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccC
Confidence 99999532110 0111348999999999999999 99999 999
Q ss_pred hhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044731 356 FVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQC--GETKIKARELRDKALAAVKSGGSSTRDLETLVQELRK 433 (443)
Q Consensus 356 ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~--~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~ 433 (443)
+.||+++++.||+|+.+. +.+++++|+++|+++|.++ +.||+||+++++.+++|+++||||++|+++|++++..
T Consensus 375 ~~na~~~~~~~~~G~~~~----~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 375 KVNARYLECVWKIGIQVE----GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHHhCeeEEeC----CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999999999999999997 5799999999999999763 5899999999999999999999999999999999865
No 5
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=8.3e-58 Score=450.90 Aligned_cols=403 Identities=27% Similarity=0.357 Sum_probs=305.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
++||+++|++++||++||++||+.|+.+|+.|||++|+.+...+.+......++++..++++..+++|++.+.+.+++..
T Consensus 5 ~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~~ 84 (453)
T PLN02764 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPVT 84 (453)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCChh
Confidence 57999999999999999999999999999999999998876555442100123334443443335777765544333322
Q ss_pred ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCCCce
Q 044731 89 GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSLDVV 168 (443)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (443)
....+..++..+.+.+++++++. ++||||+|. ..|+..+|+++|||.+.|++++++.++++.+ +. ... ..
T Consensus 85 ~~~~~~~a~~~~~~~~~~~l~~~--~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~-~~~-----~~ 154 (453)
T PLN02764 85 SADLLMSAMDLTRDQVEVVVRAV--EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PG-GEL-----GV 154 (453)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhC--CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-cc-ccC-----CC
Confidence 33445566667789999999887 789999995 7899999999999999999999988887653 21 111 11
Q ss_pred ecCCCCCC-CcccCCCCChhhh--hccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHhcCCCceee
Q 044731 169 EFRDLPRS-PVFKEEHLPTVFR--IYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFG 245 (443)
Q Consensus 169 ~~p~~p~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~ 245 (443)
.+|++|.. +.++..+++.+.. ..... +....++.++......+++ +++|||++||+.++++++...+ +++++
T Consensus 155 ~~pglp~~~v~l~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~--vlvNTf~eLE~~~~~~~~~~~~-~~v~~ 229 (453)
T PLN02764 155 PPPGYPSSKVLLRKQDAYTMKNLEPTNTI--DVGPNLLERVTTSLMNSDV--IAIRTAREIEGNFCDYIEKHCR-KKVLL 229 (453)
T ss_pred CCCCCCCCcccCcHhhCcchhhcCCCccc--hhHHHHHHHHHHhhccCCE--EEEeccHHhhHHHHHHHHhhcC-CcEEE
Confidence 23677631 1245566664322 11111 2233444445456677888 9999999999999999987655 68999
Q ss_pred eccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCCccccCC
Q 044731 246 VGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEG 325 (443)
Q Consensus 246 vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~ 325 (443)
|||+++.... . ...+ ++|.+|||+|+++|||||||||+..++.+++.+++.+|+.++++|+|+++..... +
T Consensus 230 VGPL~~~~~~---~---~~~~-~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~--~ 300 (453)
T PLN02764 230 TGPVFPEPDK---T---RELE-ERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGS--S 300 (453)
T ss_pred eccCccCccc---c---ccch-hHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCC--c
Confidence 9999854211 0 1123 6899999999999999999999999999999999999999999999999963211 1
Q ss_pred CCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccchhhHHHHHhhcce
Q 044731 326 NGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQFVNARLLVDDLRV 368 (443)
Q Consensus 326 ~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ~~na~~v~~~~g~ 368 (443)
+..+.+|+||.+|++++|+++.+|+|| +||+.||+++++.||+
T Consensus 301 ~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~ 380 (453)
T PLN02764 301 TIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKV 380 (453)
T ss_pred chhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhce
Confidence 112469999999999999999899999 9999999999888899
Q ss_pred eEEeecCCCCCCCHHHHHHHHHHHhcC--c--hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcccccc
Q 044731 369 AVLVCEGGDSVPDSDELGKVIGESLSQ--C--GETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHTS 439 (443)
Q Consensus 369 G~~l~~~~~~~~t~e~l~~ai~~vl~~--~--~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~~ 439 (443)
|+.+.....+.++.++|+++|+++|.+ + +++|+||+++++.++ +||||++++++|++++.++...++
T Consensus 381 gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~~~~~~~ 451 (453)
T PLN02764 381 SVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQDLVSGTS 451 (453)
T ss_pred EEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhccccc
Confidence 999864211368999999999999976 2 569999999999885 489999999999999999887664
No 6
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=7.3e-58 Score=456.36 Aligned_cols=411 Identities=24% Similarity=0.366 Sum_probs=308.9
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh--hc-c---CCC---CeeEEEeCCCCCCCCC
Q 044731 6 NSRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS--LL-D---ARP---AIQTLVLPFPSHPSVP 76 (443)
Q Consensus 6 ~~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~--~~-~---~~~---~i~~~~l~~~~~~~~~ 76 (443)
++.+.||+++|+|++||++||++||+.|+.+|..|||++|+.+..++.+ .. + ... .++|..+| +++|
T Consensus 4 ~~~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~p----dglp 79 (480)
T PLN02555 4 ESSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFE----DGWA 79 (480)
T ss_pred CCCCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCC----CCCC
Confidence 3456899999999999999999999999999999999999876655432 10 0 001 24444443 4566
Q ss_pred CCcccccccCCCChHHHHHHH-hhhhHHHHHHHHhC---CCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHH
Q 044731 77 AGVENVKELGNRGNLPIMSAL-GKLYDPIIQWFHSH---ANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVS 152 (443)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~---~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~ 152 (443)
++.+... + ...++..+ ..+.+.+++++++. ..+++|||+|.++.|+..+|.++|||.++|++++++.++.+
T Consensus 80 ~~~~~~~----~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~ 154 (480)
T PLN02555 80 EDDPRRQ----D-LDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAY 154 (480)
T ss_pred CCccccc----C-HHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHH
Confidence 5433211 1 22344333 35667777777642 12349999999999999999999999999999999998888
Q ss_pred hhhhccc-CCCC---CCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhH
Q 044731 153 DYCWNHT-GVVK---SLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLES 228 (443)
Q Consensus 153 ~~~~~~~-~~~~---~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~ 228 (443)
++++... .... +..++.+||+|. ++..++|.++...... ....+.+.+......++++ +++|||++||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~iPglp~---l~~~dlp~~~~~~~~~--~~~~~~~~~~~~~~~~a~~--vlvNTf~eLE~ 227 (480)
T PLN02555 155 YHYYHGLVPFPTETEPEIDVQLPCMPL---LKYDEIPSFLHPSSPY--PFLRRAILGQYKNLDKPFC--ILIDTFQELEK 227 (480)
T ss_pred HHHhhcCCCcccccCCCceeecCCCCC---cCHhhCcccccCCCCc--hHHHHHHHHHHHhcccCCE--EEEEchHHHhH
Confidence 7764321 1111 112456888886 7888888766422122 3344555566666777889 99999999999
Q ss_pred HHHHHHHHhcCCCceeeeccccCCCCC--CCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHH
Q 044731 229 EYLDYLKRKMGHDRVFGVGPLSLLGPE--STRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLE 306 (443)
Q Consensus 229 ~~~~~~~~~~~~~~v~~vGpl~~~~~~--~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~ 306 (443)
.+++.+++. . + ++.|||++..... ...+......+ ++|.+|||+++++|||||||||+..++.+++.+++.+|+
T Consensus 228 ~~~~~l~~~-~-~-v~~iGPl~~~~~~~~~~~~~~~~~~~-~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~ 303 (480)
T PLN02555 228 EIIDYMSKL-C-P-IKPVGPLFKMAKTPNSDVKGDISKPA-DDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVL 303 (480)
T ss_pred HHHHHHhhC-C-C-EEEeCcccCccccccccccccccccc-hhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHH
Confidence 999988764 3 4 9999999853211 00000001234 679999999988899999999999999999999999999
Q ss_pred hCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc----------------------------------
Q 044731 307 KSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ---------------------------------- 352 (443)
Q Consensus 307 ~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ---------------------------------- 352 (443)
.++++|||+++.....+ +.....+|+++.+++++|++++ +|+||
T Consensus 304 ~~~~~flW~~~~~~~~~-~~~~~~lp~~~~~~~~~~g~v~-~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~ 381 (480)
T PLN02555 304 NSGVSFLWVMRPPHKDS-GVEPHVLPEEFLEKAGDKGKIV-QWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCF 381 (480)
T ss_pred hcCCeEEEEEecCcccc-cchhhcCChhhhhhcCCceEEE-ecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeC
Confidence 99999999998531100 0111358999999999999988 99999
Q ss_pred ---ccchhhHHHHHhhcceeEEeecC--CCCCCCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 044731 353 ---ADQFVNARLLVDDLRVAVLVCEG--GDSVPDSDELGKVIGESLSQC--GETKIKARELRDKALAAVKSGGSSTRDLE 425 (443)
Q Consensus 353 ---~DQ~~na~~v~~~~g~G~~l~~~--~~~~~t~e~l~~ai~~vl~~~--~~yr~~a~~l~~~~r~a~~~gg~s~~~~~ 425 (443)
+||+.||+++++.||+|+.+..+ ..+.+++++|+++|+++|.++ +.+|+||++|++.+++|+++||||++|++
T Consensus 382 P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~ 461 (480)
T PLN02555 382 PQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQ 461 (480)
T ss_pred CCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 99999999999999999999531 124789999999999999753 78999999999999999999999999999
Q ss_pred HHHHHHHhccccc
Q 044731 426 TLVQELRKLRFHT 438 (443)
Q Consensus 426 ~~~~~~~~~~~~~ 438 (443)
+||+++.++...+
T Consensus 462 ~~v~~i~~~~~~~ 474 (480)
T PLN02555 462 EFVDKLVRKSVEI 474 (480)
T ss_pred HHHHHHHhcccee
Confidence 9999999875433
No 7
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=9.7e-58 Score=451.74 Aligned_cols=397 Identities=25% Similarity=0.393 Sum_probs=305.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhC-CceEEEEeCCCCchhh--hhhccC---CCCeeEEEeCCCCCCCC-CCCccc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLK-NLDITILITPKNLPIV--SSLLDA---RPAIQTLVLPFPSHPSV-PAGVEN 81 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~v--~~~~~~---~~~i~~~~l~~~~~~~~-~~~~~~ 81 (443)
+.|++++|+|++||++||++||+.|+.+ |..||++++..+...+ ...... ..+|+++.+|++..+++ +.+
T Consensus 3 ~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~--- 79 (470)
T PLN03015 3 QPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPD--- 79 (470)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCC---
Confidence 4699999999999999999999999987 9999999987654332 111110 12589998886432333 211
Q ss_pred ccccCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCC-ceeEechhHHHHHHHhhhhcccC
Q 044731 82 VKELGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIV-RITFFSSGSFLASVSDYCWNHTG 160 (443)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP-~i~~~~~~~~~~~~~~~~~~~~~ 160 (443)
. +....+..++..+.+.+++++++...+++|||+|.+..|+..+|.++||| .+.|++++++....+++++...+
T Consensus 80 ----~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~ 154 (470)
T PLN03015 80 ----A-TIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDT 154 (470)
T ss_pred ----c-cHHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhc
Confidence 0 22334555666788889998887544679999999999999999999999 68888888888777777653311
Q ss_pred C-CC---C-CCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHH
Q 044731 161 V-VK---S-LDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLK 235 (443)
Q Consensus 161 ~-~~---~-~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~ 235 (443)
. .. + .+++.+||+|. ++..++|.++... . ......+.+......++++ +++|||++||+.+++.++
T Consensus 155 ~~~~~~~~~~~~~~vPg~p~---l~~~dlp~~~~~~--~--~~~~~~~~~~~~~~~~a~g--vlvNTf~eLE~~~~~~l~ 225 (470)
T PLN03015 155 VVEGEYVDIKEPLKIPGCKP---VGPKELMETMLDR--S--DQQYKECVRSGLEVPMSDG--VLVNTWEELQGNTLAALR 225 (470)
T ss_pred ccccccCCCCCeeeCCCCCC---CChHHCCHhhcCC--C--cHHHHHHHHHHHhcccCCE--EEEechHHHhHHHHHHHH
Confidence 1 11 1 23456788876 8888888655421 1 2223333445556778889 999999999999999988
Q ss_pred Hhc------CCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCC
Q 044731 236 RKM------GHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSG 309 (443)
Q Consensus 236 ~~~------~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~ 309 (443)
..+ . +++++|||++..... ...+ ++|.+|||+++++|||||||||+..++++++++++.+|+.++
T Consensus 226 ~~~~~~~~~~-~~v~~VGPl~~~~~~-------~~~~-~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~ 296 (470)
T PLN03015 226 EDMELNRVMK-VPVYPIGPIVRTNVH-------VEKR-NSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSG 296 (470)
T ss_pred hhcccccccC-CceEEecCCCCCccc-------ccch-HHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCC
Confidence 752 2 469999999853211 1123 579999999988999999999999999999999999999999
Q ss_pred CceEEEEeCCcc-----c-cCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------
Q 044731 310 IRFLWVVKTSVI-----H-AEGNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------------- 352 (443)
Q Consensus 310 ~~~lw~~~~~~~-----~-~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------------- 352 (443)
++|||+++.+.. . +.+...+.+|+||.+|++++|+++.+|+||
T Consensus 297 ~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~ 376 (470)
T PLN03015 297 QRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPI 376 (470)
T ss_pred CcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCE
Confidence 999999985311 0 001122368999999999999888799999
Q ss_pred ------ccchhhHHHHHhhcceeEEeec-CCCCCCCHHHHHHHHHHHhc---Cc-hHHHHHHHHHHHHHHHHHhcCCChH
Q 044731 353 ------ADQFVNARLLVDDLRVAVLVCE-GGDSVPDSDELGKVIGESLS---QC-GETKIKARELRDKALAAVKSGGSST 421 (443)
Q Consensus 353 ------~DQ~~na~~v~~~~g~G~~l~~-~~~~~~t~e~l~~ai~~vl~---~~-~~yr~~a~~l~~~~r~a~~~gg~s~ 421 (443)
+||+.||+++++.||+|+++.. ...+.+++|+|+++|+++|. ++ +.+|+||++|++.+++|+++||||+
T Consensus 377 v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~ 456 (470)
T PLN03015 377 VAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSY 456 (470)
T ss_pred EecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHH
Confidence 9999999999999999999952 11247999999999999995 23 7999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 044731 422 RDLETLVQEL 431 (443)
Q Consensus 422 ~~~~~~~~~~ 431 (443)
+|+++|+.++
T Consensus 457 ~nl~~~~~~~ 466 (470)
T PLN03015 457 NSLFEWAKRC 466 (470)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 8
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=2.7e-57 Score=449.43 Aligned_cols=398 Identities=22% Similarity=0.339 Sum_probs=299.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHh-CCceEEEEeCCCC-chhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSL-KNLDITILITPKN-LPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELG 86 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~-rGh~Vt~~t~~~~-~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 86 (443)
+.||+++|+|++||++||++||+.|++ +|+.|||++|+.+ ............+++++.++ ++++++.+...
T Consensus 3 ~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~~~~~~i~~~~i~----dglp~g~~~~~--- 75 (455)
T PLN02152 3 PPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFS----DGFDDGVISNT--- 75 (455)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccCCCCCCEEEEEcC----CCCCCcccccc---
Confidence 359999999999999999999999996 7999999999854 22211111101368888876 56666542211
Q ss_pred CCChHHHHHHHhhhhHHHHHHHHhCC---CCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCC
Q 044731 87 NRGNLPIMSALGKLYDPIIQWFHSHA---NPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVK 163 (443)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~---~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~ 163 (443)
.+....+......+.+.+++++++.. .+++|||+|.+..|+..+|+++|||.+.|++++++.++.+++++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~----- 150 (455)
T PLN02152 76 DDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG----- 150 (455)
T ss_pred ccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc-----
Confidence 12223344444566677777776531 2459999999999999999999999999999999988888776431
Q ss_pred CCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhc--cCccEEEEcCchhhhHHHHHHHHHhcCCC
Q 044731 164 SLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTL--SWGWGCVFNSFDDLESEYLDYLKRKMGHD 241 (443)
Q Consensus 164 ~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~n~~~~l~~~~~~~~~~~~~~~ 241 (443)
....+.+|++|. ++..++|.++...... ......+.+....... +++ +++|||++||+.++++++. .
T Consensus 151 ~~~~~~iPglp~---l~~~dlp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--vlvNTf~eLE~~~~~~l~~----~ 219 (455)
T PLN02152 151 NNSVFEFPNLPS---LEIRDLPSFLSPSNTN--KAAQAVYQELMEFLKEESNPK--ILVNTFDSLEPEFLTAIPN----I 219 (455)
T ss_pred CCCeeecCCCCC---CchHHCchhhcCCCCc--hhHHHHHHHHHHHhhhccCCE--EEEeChHHhhHHHHHhhhc----C
Confidence 112456788876 7788888776432222 3334555555554433 458 9999999999999988854 2
Q ss_pred ceeeeccccCCCC--CCCCCC--CCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEe
Q 044731 242 RVFGVGPLSLLGP--ESTRGG--DSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVK 317 (443)
Q Consensus 242 ~v~~vGpl~~~~~--~~~~~~--~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~ 317 (443)
++++|||+++... ....+. .....+ .+|.+|||+++++|||||||||+..++.+++++++.+|+.++++|||+++
T Consensus 220 ~v~~VGPL~~~~~~~~~~~~~~~~~~~~~-~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r 298 (455)
T PLN02152 220 EMVAVGPLLPAEIFTGSESGKDLSVRDQS-SSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVIT 298 (455)
T ss_pred CEEEEcccCccccccccccCccccccccc-hHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 5999999985321 100010 001123 57999999998889999999999999999999999999999999999998
Q ss_pred CCccccC---CCCC--CCCchhHHHHhhcCceEeecCCCc-------------------------------------ccc
Q 044731 318 TSVIHAE---GNGY--GLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQ 355 (443)
Q Consensus 318 ~~~~~~~---~~~~--~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ 355 (443)
....... .... ..+|++|.+|+++|++|+ +|+|| +||
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~-~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ 377 (455)
T PLN02152 299 DKLNREAKIEGEEETEIEKIAGFRHELEEVGMIV-SWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQ 377 (455)
T ss_pred cCcccccccccccccccccchhHHHhccCCeEEE-eeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccc
Confidence 6321100 0000 125789999999999998 99999 999
Q ss_pred hhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044731 356 FVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQC-GETKIKARELRDKALAAVKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 356 ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~-~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 431 (443)
+.||+++++.||+|+.+..+..+.+|.|+|+++|+++|+++ ..||+||+++++++++|+++||||++|+++|++++
T Consensus 378 ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 378 PANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred hHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 99999999988888888643335679999999999999864 56999999999999999999999999999999976
No 9
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.6e-57 Score=448.78 Aligned_cols=390 Identities=27% Similarity=0.398 Sum_probs=298.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCC-ccccccc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAG-VENVKEL 85 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~-~~~~~~~ 85 (443)
+++.||+++|+|++||++||++||+.|+.+|+.|||++|+.+..++.... ..+|+++.+| +++|++ .+...
T Consensus 3 ~~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~--~~~i~~~~ip----dglp~~~~~~~~-- 74 (449)
T PLN02173 3 KMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDP--SSPISIATIS----DGYDQGGFSSAG-- 74 (449)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccCC--CCCEEEEEcC----CCCCCccccccc--
Confidence 34579999999999999999999999999999999999987654442211 2469999887 467653 22211
Q ss_pred CCCChHHHHHHH-hhhhHHHHHHHHhCC--CCC-cEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCC
Q 044731 86 GNRGNLPIMSAL-GKLYDPIIQWFHSHA--NPP-VAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGV 161 (443)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~ll~~~~--~~~-D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~ 161 (443)
+ ...++..+ ..+.+.+++++++.. .+| +|||+|.+..|+..+|+++|||.+.|++++++.+..+++... ..
T Consensus 75 --~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~-~~- 149 (449)
T PLN02173 75 --S-VPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYI-NN- 149 (449)
T ss_pred --C-HHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHh-cc-
Confidence 1 22344433 466778888777531 144 999999999999999999999999999998877766553211 11
Q ss_pred CCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHhcCCC
Q 044731 162 VKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKMGHD 241 (443)
Q Consensus 162 ~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~ 241 (443)
....+.+|++|. ++..++|.++...... ......+.+......++++ +++|||++||+.++++++.. +
T Consensus 150 --~~~~~~~pg~p~---l~~~dlp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--vlvNTf~eLE~~~~~~~~~~---~ 217 (449)
T PLN02173 150 --GSLTLPIKDLPL---LELQDLPTFVTPTGSH--LAYFEMVLQQFTNFDKADF--VLVNSFHDLDLHENELLSKV---C 217 (449)
T ss_pred --CCccCCCCCCCC---CChhhCChhhcCCCCc--hHHHHHHHHHHhhhccCCE--EEEeCHHHhhHHHHHHHHhc---C
Confidence 112344678875 7778888766432222 3344545555666778889 99999999999999998764 4
Q ss_pred ceeeeccccCCCC---C--CCCCC--CCC--CCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCce
Q 044731 242 RVFGVGPLSLLGP---E--STRGG--DSG--LDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRF 312 (443)
Q Consensus 242 ~v~~vGpl~~~~~---~--~~~~~--~~~--~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~ 312 (443)
++++|||+++... . ...+. ... ..+ ++|.+|||+++++|||||||||+..++.+++.+++.+| ++++|
T Consensus 218 ~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~f 294 (449)
T PLN02173 218 PVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEA-ALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSY 294 (449)
T ss_pred CeeEEcccCchhhccccccccccccccccccccc-hHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCE
Confidence 6999999985311 0 00000 000 123 56999999999999999999999999999999999999 68899
Q ss_pred EEEEeCCccccCCCCCCCCchhHHHHhh-cCceEeecCCCc-------------------------------------cc
Q 044731 313 LWVVKTSVIHAEGNGYGLIPYGFEERVA-GRGLVLKGWVPQ-------------------------------------AD 354 (443)
Q Consensus 313 lw~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~vv~~W~PQ-------------------------------------~D 354 (443)
||+++.+.. +.+|++|.+++. ++++|+ +|+|| +|
T Consensus 295 lWvvr~~~~-------~~lp~~~~~~~~~~~~~i~-~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~D 366 (449)
T PLN02173 295 LWVVRASEE-------SKLPPGFLETVDKDKSLVL-KWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTD 366 (449)
T ss_pred EEEEeccch-------hcccchHHHhhcCCceEEe-CCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhc
Confidence 999986321 358999998884 566677 99999 99
Q ss_pred chhhHHHHHhhcceeEEeecCC-CCCCCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044731 355 QFVNARLLVDDLRVAVLVCEGG-DSVPDSDELGKVIGESLSQC--GETKIKARELRDKALAAVKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 355 Q~~na~~v~~~~g~G~~l~~~~-~~~~t~e~l~~ai~~vl~~~--~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 431 (443)
|+.||+++++.||+|+.+..+. ++.++.|+|+++|+++|.++ ..+|+||+++++.+++|+++||||++|+++|++++
T Consensus 367 Q~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~ 446 (449)
T PLN02173 367 QPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKI 446 (449)
T ss_pred chHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHh
Confidence 9999999999999999997522 23579999999999999764 68999999999999999999999999999999987
Q ss_pred H
Q 044731 432 R 432 (443)
Q Consensus 432 ~ 432 (443)
.
T Consensus 447 ~ 447 (449)
T PLN02173 447 Q 447 (449)
T ss_pred c
Confidence 4
No 10
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=6.8e-57 Score=454.44 Aligned_cols=415 Identities=33% Similarity=0.548 Sum_probs=307.5
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccC------CCCeeEEEeCCCCC-CCCCCC
Q 044731 6 NSRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDA------RPAIQTLVLPFPSH-PSVPAG 78 (443)
Q Consensus 6 ~~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~------~~~i~~~~l~~~~~-~~~~~~ 78 (443)
++++.||+++|+|++||++||++||++|+.|||+|||++++.+..++++.... ...+.+..++++.. +++|++
T Consensus 2 ~~~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g 81 (482)
T PLN03007 2 NHEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEG 81 (482)
T ss_pred CCCCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCC
Confidence 34568999999999999999999999999999999999999887665543210 11235555555533 356665
Q ss_pred cccccccC---C----CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHH
Q 044731 79 VENVKELG---N----RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASV 151 (443)
Q Consensus 79 ~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~ 151 (443)
.+.....+ . .+...+......+.+.+++++++. ++||||+|.++.|+..+|+++|||.++|++++++..+.
T Consensus 82 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~--~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~ 159 (482)
T PLN03007 82 CENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETT--RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCA 159 (482)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcC--CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHH
Confidence 44332110 0 122334444467778888888776 89999999999999999999999999999999877766
Q ss_pred Hhhhhccc---CCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhH
Q 044731 152 SDYCWNHT---GVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLES 228 (443)
Q Consensus 152 ~~~~~~~~---~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~ 228 (443)
++.+.... ........+.+|++|..+.++..+++.. ... ..+...+........++++ +++|||++||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~--vl~Nt~~~le~ 231 (482)
T PLN03007 160 SYCIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDA----DEE--SPMGKFMKEVRESEVKSFG--VLVNSFYELES 231 (482)
T ss_pred HHHHHhcccccccCCCCceeeCCCCCCccccCHHhcCCC----CCc--hhHHHHHHHHHhhcccCCE--EEEECHHHHHH
Confidence 55433221 1111112344677764333444444421 111 2234444455556677888 99999999999
Q ss_pred HHHHHHHHhcCCCceeeeccccCCCCCC----CCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHH
Q 044731 229 EYLDYLKRKMGHDRVFGVGPLSLLGPES----TRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALG 304 (443)
Q Consensus 229 ~~~~~~~~~~~~~~v~~vGpl~~~~~~~----~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~a 304 (443)
++.+.+++..+ .++++|||+.+..... ..+......+ ++|.+|||+++++|||||||||+..++.+++.+++.+
T Consensus 232 ~~~~~~~~~~~-~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~-~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~ 309 (482)
T PLN03007 232 AYADFYKSFVA-KRAWHIGPLSLYNRGFEEKAERGKKANIDE-QECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAG 309 (482)
T ss_pred HHHHHHHhccC-CCEEEEccccccccccccccccCCccccch-hHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHH
Confidence 99988887665 5799999987532210 0010111234 6799999999889999999999999999999999999
Q ss_pred HHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc--------------------------------
Q 044731 305 LEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------- 352 (443)
Q Consensus 305 l~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------- 352 (443)
|+.++++|||+++..... .+..+.+|++|.+|+.++|+++.+|+||
T Consensus 310 l~~~~~~flw~~~~~~~~--~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v 387 (482)
T PLN03007 310 LEGSGQNFIWVVRKNENQ--GEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMV 387 (482)
T ss_pred HHHCCCCEEEEEecCCcc--cchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCee
Confidence 999999999999964211 0112358999999999999988899999
Q ss_pred -----ccchhhHHHHHhhcceeEEeecC-----CCCCCCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhcCCCh
Q 044731 353 -----ADQFVNARLLVDDLRVAVLVCEG-----GDSVPDSDELGKVIGESLSQC--GETKIKARELRDKALAAVKSGGSS 420 (443)
Q Consensus 353 -----~DQ~~na~~v~~~~g~G~~l~~~-----~~~~~t~e~l~~ai~~vl~~~--~~yr~~a~~l~~~~r~a~~~gg~s 420 (443)
+||+.||+++++.|++|+.+..+ ..+.+++++|+++|+++|.++ ++||+||+++++.+++|+++||||
T Consensus 388 ~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS 467 (482)
T PLN03007 388 TWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSS 467 (482)
T ss_pred eccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcH
Confidence 99999999999877888776421 125689999999999999872 499999999999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 044731 421 TRDLETLVQELRKL 434 (443)
Q Consensus 421 ~~~~~~~~~~~~~~ 434 (443)
++|+++|++.+.+.
T Consensus 468 ~~~l~~~v~~~~~~ 481 (482)
T PLN03007 468 FNDLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999864
No 11
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=5e-57 Score=447.65 Aligned_cols=394 Identities=25% Similarity=0.359 Sum_probs=300.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
++||+++|+|++||++||++||+.|++|||+|||+|+..+..++.+......++++..+++++.+++|++.+....+...
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~~~~~l~~~ 83 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAETTSDIPIS 83 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCCCcccccchhHH
Confidence 57999999999999999999999999999999999998776665442110135778877765445677665432222112
Q ss_pred ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCCCce
Q 044731 89 GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSLDVV 168 (443)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (443)
....+...+..+.+.+++++++. ++||||+| ++.|+..+|.++|||.+.|++++++.++ +++++.. .. ..
T Consensus 84 l~~~~~~~~~~~~~~l~~~L~~~--~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~~-~~-----~~ 153 (442)
T PLN02208 84 MDNLLSEALDLTRDQVEAAVRAL--RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPGG-KL-----GV 153 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCcc-cc-----CC
Confidence 22334455677888899999887 88999999 5789999999999999999999987654 5554321 00 11
Q ss_pred ecCCCCCC-CcccCCCCChhhhhccCCCCChHHHHHH-HHHhhhhccCccEEEEcCchhhhHHHHHHHHHhcCCCceeee
Q 044731 169 EFRDLPRS-PVFKEEHLPTVFRIYMVSDSDPEFEFVK-DGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFGV 246 (443)
Q Consensus 169 ~~p~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~v 246 (443)
.+|++|.. +.++..+++.+ . .. ......+. ++.....++++ +++|||++||+.+++++++.++ |++++|
T Consensus 154 ~~pglp~~~~~~~~~~~~~~-~---~~--~~~~~~~~~~~~~~~~~~~~--vl~Ntf~eLE~~~~~~~~~~~~-~~v~~v 224 (442)
T PLN02208 154 PPPGYPSSKVLFRENDAHAL-A---TL--SIFYKRLYHQITTGLKSCDV--IALRTCKEIEGKFCDYISRQYH-KKVLLT 224 (442)
T ss_pred CCCCCCCcccccCHHHcCcc-c---cc--chHHHHHHHHHHhhhccCCE--EEEECHHHHHHHHHHHHHhhcC-CCEEEE
Confidence 24677641 22455566643 1 11 22333333 33345667888 9999999999999999988777 799999
Q ss_pred ccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCCccccCCC
Q 044731 247 GPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEGN 326 (443)
Q Consensus 247 Gpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~ 326 (443)
||+++.... . ...+ ++|.+|||+++++|||||||||+..++.+++.+++.+|+.++.+|+|+++.+... +.
T Consensus 225 Gpl~~~~~~---~---~~~~-~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~--~~ 295 (442)
T PLN02208 225 GPMFPEPDT---S---KPLE-EQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGS--ST 295 (442)
T ss_pred eecccCcCC---C---CCCH-HHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcc--cc
Confidence 999864321 0 1235 7899999999889999999999999999999999999999999999999964210 01
Q ss_pred CCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccchhhHHHHHhhccee
Q 044731 327 GYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQFVNARLLVDDLRVA 369 (443)
Q Consensus 327 ~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ~~na~~v~~~~g~G 369 (443)
..+.+|++|.+|++++|+++.+|+|| +||+.||+++++.||+|
T Consensus 296 ~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~g 375 (442)
T PLN02208 296 VQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVS 375 (442)
T ss_pred hhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhcee
Confidence 12468999999999999999899999 99999999998878999
Q ss_pred EEeecCCCCCCCHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 044731 370 VLVCEGGDSVPDSDELGKVIGESLSQC----GETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKL 434 (443)
Q Consensus 370 ~~l~~~~~~~~t~e~l~~ai~~vl~~~----~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~ 434 (443)
+.++....+.+++++|+++|+++|+++ +++|+||+++++.++ +||||++++++|++++++.
T Consensus 376 v~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 376 VEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred EEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHHh
Confidence 999752123499999999999999752 569999999999984 3789999999999999764
No 12
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=8e-57 Score=448.51 Aligned_cols=389 Identities=21% Similarity=0.347 Sum_probs=298.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
+.||+++|+|++||++||++||+.|+.+|++||++|++.+.+++.+......+++++.+|. +++++. +.+
T Consensus 6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~lp~----g~~~~~------~~~ 75 (448)
T PLN02562 6 RPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSISD----GQDDDP------PRD 75 (448)
T ss_pred CcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEECCC----CCCCCc------ccc
Confidence 4699999999999999999999999999999999999887666654322123688988873 333211 111
Q ss_pred ChHHHHHHHh-hhhHHHHHHHHhCC--CCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcc--cC-CC
Q 044731 89 GNLPIMSALG-KLYDPIIQWFHSHA--NPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNH--TG-VV 162 (443)
Q Consensus 89 ~~~~~~~~~~-~~~~~~~~ll~~~~--~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~--~~-~~ 162 (443)
...+...+. .+.+.+++++++.. .+++|||+|.+..|+..+|+++|||.+.|++++++.++.+++++.. .+ ..
T Consensus 76 -~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~ 154 (448)
T PLN02562 76 -FFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLIS 154 (448)
T ss_pred -HHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccc
Confidence 223444443 57788888887642 2458999999999999999999999999999999887777665432 10 11
Q ss_pred C-----CCCce-ecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHH
Q 044731 163 K-----SLDVV-EFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKR 236 (443)
Q Consensus 163 ~-----~~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~ 236 (443)
. +.+++ .+|++|. ++..+++.++...... ....+.+.+......++++ +++|||++||+.+++.++.
T Consensus 155 ~~~~~~~~~~~~~~Pg~~~---l~~~dl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--vlvNTf~eLE~~~~~~~~~ 227 (448)
T PLN02562 155 ETGCPRQLEKICVLPEQPL---LSTEDLPWLIGTPKAR--KARFKFWTRTLERTKSLRW--ILMNSFKDEEYDDVKNHQA 227 (448)
T ss_pred cccccccccccccCCCCCC---CChhhCcchhcCCCcc--hHHHHHHHHHHhccccCCE--EEEcChhhhCHHHHHHHHh
Confidence 1 11122 4677775 7778888765432112 3335555566666777888 9999999999988887654
Q ss_pred h----cCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCc-cCCHHHHHHHHHHHHhCCCc
Q 044731 237 K----MGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQK-VLSKEQMEALALGLEKSGIR 311 (443)
Q Consensus 237 ~----~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~-~~~~~~~~~i~~al~~~~~~ 311 (443)
. .. |++++|||+++......++......+ .+|.+|||+++++|||||||||+. .++.+++++++.+|++++++
T Consensus 228 ~~~~~~~-~~v~~iGpl~~~~~~~~~~~~~~~~~-~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~ 305 (448)
T PLN02562 228 SYNNGQN-PQILQIGPLHNQEATTITKPSFWEED-MSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRP 305 (448)
T ss_pred hhccccC-CCEEEecCcccccccccCCCccccch-HHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCC
Confidence 2 24 68999999986432100010001223 578899999988899999999976 68999999999999999999
Q ss_pred eEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------cc
Q 044731 312 FLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------AD 354 (443)
Q Consensus 312 ~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~D 354 (443)
|||+++.+.. +.+|++|.+++++|++++ +|+|| +|
T Consensus 306 fiW~~~~~~~-------~~l~~~~~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~D 377 (448)
T PLN02562 306 FIWVLNPVWR-------EGLPPGYVERVSKQGKVV-SWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGD 377 (448)
T ss_pred EEEEEcCCch-------hhCCHHHHHHhccCEEEE-ecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccc
Confidence 9999986421 258999999999999998 99999 99
Q ss_pred chhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 355 QFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 355 Q~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
|+.||+++++.||+|+.+. .++.++|+++|+++|.+ ++||+||+++++.++++ ++||||++|+++|+++++
T Consensus 378 Q~~na~~~~~~~g~g~~~~-----~~~~~~l~~~v~~~l~~-~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 378 QFVNCAYIVDVWKIGVRIS-----GFGQKEVEEGLRKVMED-SGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred hHHHHHHHHHHhCceeEeC-----CCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 9999999998789998885 47999999999999999 79999999999999987 778999999999999863
No 13
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.6e-56 Score=445.22 Aligned_cols=415 Identities=25% Similarity=0.357 Sum_probs=307.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccC-CCCeeEEEeCCCCCCCCCCCccccccc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDA-RPAIQTLVLPFPSHPSVPAGVENVKEL 85 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~-~~~i~~~~l~~~~~~~~~~~~~~~~~~ 85 (443)
..+.||+++|+|++||++||++||+.|+.||+.|||++|+.+..++.+.... ..+|+++.+|++..+++|++.+...+.
T Consensus 4 ~~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~ 83 (472)
T PLN02670 4 EEVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDV 83 (472)
T ss_pred CCCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCccccccc
Confidence 3467999999999999999999999999999999999999876555432110 246999999987667788665433222
Q ss_pred CCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcc---cCCC
Q 044731 86 GNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNH---TGVV 162 (443)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~---~~~~ 162 (443)
+......+..+...+.+.+++++++. +++|||+|.+..|+..+|+++|||.+.|++++++.++.++++... +...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~ 161 (472)
T PLN02670 84 PYTKQQLLKKAFDLLEPPLTTFLETS--KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLR 161 (472)
T ss_pred chhhHHHHHHHHHHhHHHHHHHHHhC--CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCC
Confidence 11111234445567888999999887 789999999999999999999999999999999888776544321 1111
Q ss_pred CCCCce-ecCCCCC---CCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHhc
Q 044731 163 KSLDVV-EFRDLPR---SPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKM 238 (443)
Q Consensus 163 ~~~~~~-~~p~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~ 238 (443)
...+.. .+|+.++ .+.++..++|.++...... ......+.+......++++ +++|||++||+.++++++..+
T Consensus 162 ~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~--~~~~~~~~~~~~~~~~~~g--vlvNTf~eLE~~~l~~l~~~~ 237 (472)
T PLN02670 162 STAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEED--ETGPSDSVRFGFAIGGSDV--VIIRSSPEFEPEWFDLLSDLY 237 (472)
T ss_pred CccccccCCCCcCCCCccccccHHHhhHHHhccCcc--chHHHHHHHHHhhcccCCE--EEEeCHHHHhHHHHHHHHHhh
Confidence 111111 2444321 1124455777665432211 2223333344445667888 999999999999999998876
Q ss_pred CCCceeeeccccCCC-CCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEe
Q 044731 239 GHDRVFGVGPLSLLG-PESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVK 317 (443)
Q Consensus 239 ~~~~v~~vGpl~~~~-~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~ 317 (443)
+ +++++|||+++.. ............+ ++|.+|||+++++|||||||||+..++.+++.+++.+|+.++++|||+++
T Consensus 238 ~-~~v~~VGPl~~~~~~~~~~~~~~~~~~-~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r 315 (472)
T PLN02670 238 R-KPIIPIGFLPPVIEDDEEDDTIDVKGW-VRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLR 315 (472)
T ss_pred C-CCeEEEecCCccccccccccccccchh-HHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEc
Confidence 5 6899999997531 1100000000123 57999999998899999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccchhhHH
Q 044731 318 TSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQFVNAR 360 (443)
Q Consensus 318 ~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ~~na~ 360 (443)
...... .+....+|++|.+|++++|+++.+|+|| +||+.||+
T Consensus 316 ~~~~~~-~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~ 394 (472)
T PLN02670 316 NEPGTT-QNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTR 394 (472)
T ss_pred CCcccc-cchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHH
Confidence 631100 1112369999999999999998899999 99999999
Q ss_pred HHHhhcceeEEeecCC-CCCCCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 044731 361 LLVDDLRVAVLVCEGG-DSVPDSDELGKVIGESLSQC--GETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLR 435 (443)
Q Consensus 361 ~v~~~~g~G~~l~~~~-~~~~t~e~l~~ai~~vl~~~--~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~ 435 (443)
++++ ||+|+.+.... .+.++.++|+++|+++|.++ ++||+||+++++.+++ .+.-.+.++.|++++...+
T Consensus 395 ~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 395 LLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLRENR 467 (472)
T ss_pred HHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHHhc
Confidence 9975 59999997521 24589999999999999773 4899999999999985 3446789999999998876
No 14
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.3e-56 Score=445.25 Aligned_cols=398 Identities=25% Similarity=0.365 Sum_probs=299.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
+.||+++|+|++||++||++||+.|+++|++|||++++.+..++.+......++++..++++..+++|++.+...++...
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l~~~ 83 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDLPNS 83 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccchhh
Confidence 57999999999999999999999999999999999998876655432111235888777766556787765433332212
Q ss_pred ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCCCce
Q 044731 89 GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSLDVV 168 (443)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (443)
....+......+.+.++++++.. ++||||+|. ..|+..+|+++|||.+.|++++++..+.+.+... . . ..
T Consensus 84 ~~~~~~~a~~~l~~~l~~~L~~~--~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~--~---~--~~ 153 (446)
T PLN00414 84 TKKPIFDAMDLLRDQIEAKVRAL--KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRA--E---L--GF 153 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHh--h---c--CC
Confidence 23345556677888888888776 789999995 7899999999999999999999988887665211 0 0 11
Q ss_pred ecCCCCCC-CcccCCCC--ChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHhcCCCceee
Q 044731 169 EFRDLPRS-PVFKEEHL--PTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFG 245 (443)
Q Consensus 169 ~~p~~p~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~ 245 (443)
.+|++|.. +.++..+. +.++. .....+.+......++++ +++|||++||+.++++++..++ +++++
T Consensus 154 ~~pg~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~--vlvNTf~eLE~~~~~~~~~~~~-~~v~~ 222 (446)
T PLN00414 154 PPPDYPLSKVALRGHDANVCSLFA--------NSHELFGLITKGLKNCDV--VSIRTCVELEGNLCDFIERQCQ-RKVLL 222 (446)
T ss_pred CCCCCCCCcCcCchhhcccchhhc--------ccHHHHHHHHHhhccCCE--EEEechHHHHHHHHHHHHHhcC-CCeEE
Confidence 24566531 11222221 12111 112333344455667888 9999999999999999988766 68999
Q ss_pred eccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCCccccCC
Q 044731 246 VGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEG 325 (443)
Q Consensus 246 vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~ 325 (443)
|||+++.... ... ...+ .+|.+|||+|+++|||||||||+..++.+++.+++.+|+.++++|+|+++..... +
T Consensus 223 VGPl~~~~~~---~~~-~~~~-~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~--~ 295 (446)
T PLN00414 223 TGPMLPEPQN---KSG-KPLE-DRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGS--S 295 (446)
T ss_pred EcccCCCccc---ccC-cccH-HHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCc--c
Confidence 9999853321 000 1123 5799999999999999999999999999999999999999999999999964211 1
Q ss_pred CCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccchhhHHHHHhhcce
Q 044731 326 NGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQFVNARLLVDDLRV 368 (443)
Q Consensus 326 ~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ~~na~~v~~~~g~ 368 (443)
+..+.+|+||.+|++++|+|+.+|+|| +||+.||+++++.||+
T Consensus 296 ~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~ 375 (446)
T PLN00414 296 TVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEV 375 (446)
T ss_pred cchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCe
Confidence 112469999999999999999899999 9999999999888899
Q ss_pred eEEeecCCCCCCCHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccccc
Q 044731 369 AVLVCEGGDSVPDSDELGKVIGESLSQC----GETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHT 438 (443)
Q Consensus 369 G~~l~~~~~~~~t~e~l~~ai~~vl~~~----~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~ 438 (443)
|+.+.....+.+++++|+++|+++|.++ +.||+||+++++.+. ++||+| .++++|++++.+.+-+|
T Consensus 376 g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~~v~~~~~~~~~~ 445 (446)
T PLN00414 376 SVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADKFVEALENEVNNT 445 (446)
T ss_pred EEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHHHHHHHHHhcccC
Confidence 9999742123589999999999999752 459999999999974 567733 35999999998776554
No 15
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=2.4e-56 Score=443.51 Aligned_cols=401 Identities=24% Similarity=0.411 Sum_probs=299.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCC--ceEEEEeCCCCc-hhhhhhcc---C-CCCeeEEEeCCCCCCCCCCCccc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKN--LDITILITPKNL-PIVSSLLD---A-RPAIQTLVLPFPSHPSVPAGVEN 81 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rG--h~Vt~~t~~~~~-~~v~~~~~---~-~~~i~~~~l~~~~~~~~~~~~~~ 81 (443)
+.|++++|+|++||++||++||+.|+.+| ..||+++++.+. ..+..... . ..+++|+.+|... ..++. ..
T Consensus 3 ~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~--~~~~~-~~ 79 (468)
T PLN02207 3 NAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELE--EKPTL-GG 79 (468)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCC--CCCcc-cc
Confidence 57999999999999999999999999998 999999998754 22222111 0 1368999888321 11110 00
Q ss_pred ccccCCCChHHHHHHHhhh----hHHHHHHHHhCC---CCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhh
Q 044731 82 VKELGNRGNLPIMSALGKL----YDPIIQWFHSHA---NPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDY 154 (443)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~---~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~ 154 (443)
.. +....+...+..+ .+.+++++++.. .+.+|||+|.+++|+..+|+++|||.+.|++++++.++.+.+
T Consensus 80 ~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~ 155 (468)
T PLN02207 80 TQ----SVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQY 155 (468)
T ss_pred cc----CHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHH
Confidence 00 1222333333333 556666665421 134999999999999999999999999999999988888777
Q ss_pred hhcccC----C--CCCCCceecCCC-CCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhh
Q 044731 155 CWNHTG----V--VKSLDVVEFRDL-PRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLE 227 (443)
Q Consensus 155 ~~~~~~----~--~~~~~~~~~p~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~ 227 (443)
++.... . ..+..++.+||+ |+ ++..++|.++... .. +..+.+......++++ +++|||++||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~vPgl~~~---l~~~dlp~~~~~~-----~~-~~~~~~~~~~~~~~~~--vlvNtf~~LE 224 (468)
T PLN02207 156 LADRHSKDTSVFVRNSEEMLSIPGFVNP---VPANVLPSALFVE-----DG-YDAYVKLAILFTKANG--ILVNSSFDIE 224 (468)
T ss_pred hhhccccccccCcCCCCCeEECCCCCCC---CChHHCcchhcCC-----cc-HHHHHHHHHhcccCCE--EEEEchHHHh
Confidence 653311 0 011123567887 44 7888888765321 22 3334444556677888 9999999999
Q ss_pred HHHHHHHHH-hcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHH
Q 044731 228 SEYLDYLKR-KMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLE 306 (443)
Q Consensus 228 ~~~~~~~~~-~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~ 306 (443)
.++++.++. ... |++++|||++..... ..+......+ ++|.+|||+++++|||||||||+..++.+++++++.+|+
T Consensus 225 ~~~~~~~~~~~~~-p~v~~VGPl~~~~~~-~~~~~~~~~~-~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~ 301 (468)
T PLN02207 225 PYSVNHFLDEQNY-PSVYAVGPIFDLKAQ-PHPEQDLARR-DELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLE 301 (468)
T ss_pred HHHHHHHHhccCC-CcEEEecCCcccccC-CCCccccchh-hHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHH
Confidence 999988865 233 689999999864321 0010001123 579999999988999999999999999999999999999
Q ss_pred hCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc----------------------------------
Q 044731 307 KSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ---------------------------------- 352 (443)
Q Consensus 307 ~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ---------------------------------- 352 (443)
.++++|||+++.... ...+.+|++|.+|+++|++|+ +|+||
T Consensus 302 ~~~~~flW~~r~~~~----~~~~~lp~~f~er~~~~g~i~-~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~ 376 (468)
T PLN02207 302 LCQYRFLWSLRTEEV----TNDDLLPEGFLDRVSGRGMIC-GWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTW 376 (468)
T ss_pred HCCCcEEEEEeCCCc----cccccCCHHHHhhcCCCeEEE-EeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEec
Confidence 999999999995321 012469999999999999988 99999
Q ss_pred ---ccchhhHHHHHhhcceeEEeecC----CCCCCCHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 044731 353 ---ADQFVNARLLVDDLRVAVLVCEG----GDSVPDSDELGKVIGESLSQC-GETKIKARELRDKALAAVKSGGSSTRDL 424 (443)
Q Consensus 353 ---~DQ~~na~~v~~~~g~G~~l~~~----~~~~~t~e~l~~ai~~vl~~~-~~yr~~a~~l~~~~r~a~~~gg~s~~~~ 424 (443)
+||+.||+++++.||+|+.+..+ ..+.+++++|+++|+++|.++ ++||+||+++++.+++|+++||||++|+
T Consensus 377 P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l 456 (468)
T PLN02207 377 PMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAI 456 (468)
T ss_pred CccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999999988999988521 123579999999999999722 7999999999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 044731 425 ETLVQELRKLR 435 (443)
Q Consensus 425 ~~~~~~~~~~~ 435 (443)
++|++++.+-+
T Consensus 457 ~~~v~~~~~~~ 467 (468)
T PLN02207 457 EKFIHDVIGIK 467 (468)
T ss_pred HHHHHHHHhcc
Confidence 99999988643
No 16
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.7e-56 Score=447.87 Aligned_cols=403 Identities=27% Similarity=0.396 Sum_probs=307.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCC----ceEEEEeCCCCc----hhhhhhccC----CCCeeEEEeCCCCCCCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKN----LDITILITPKNL----PIVSSLLDA----RPAIQTLVLPFPSHPSVP 76 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rG----h~Vt~~t~~~~~----~~v~~~~~~----~~~i~~~~l~~~~~~~~~ 76 (443)
+.||+++|+|++||++||++||+.|+.|| +.|||++++.+. .++...... ..+|+++.+|++. .+
T Consensus 3 ~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~---~p 79 (480)
T PLN00164 3 APTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVE---PP 79 (480)
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCC---CC
Confidence 56999999999999999999999999997 899999987642 233332110 1258899887531 23
Q ss_pred CCcccccccCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhh
Q 044731 77 AGVENVKELGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCW 156 (443)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~ 156 (443)
++.+.. ...+......+.+.+++++++...+++|||+|.+..|+..+|+++|||.+.|++++++.++++++++
T Consensus 80 ~~~e~~-------~~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~ 152 (480)
T PLN00164 80 TDAAGV-------EEFISRYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLP 152 (480)
T ss_pred CccccH-------HHHHHHHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhh
Confidence 322211 1222334456778888888765325699999999999999999999999999999999988888775
Q ss_pred ccc-CC----CCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHH
Q 044731 157 NHT-GV----VKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYL 231 (443)
Q Consensus 157 ~~~-~~----~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~ 231 (443)
... .. .....++.+||+|. ++..++|.++... . +.....+........++++ +++|||++||+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~iPGlp~---l~~~dlp~~~~~~--~--~~~~~~~~~~~~~~~~~~~--vlvNTf~eLE~~~~ 223 (480)
T PLN00164 153 ALDEEVAVEFEEMEGAVDVPGLPP---VPASSLPAPVMDK--K--SPNYAWFVYHGRRFMEAAG--IIVNTAAELEPGVL 223 (480)
T ss_pred hhcccccCcccccCcceecCCCCC---CChHHCCchhcCC--C--cHHHHHHHHHHHhhhhcCE--EEEechHHhhHHHH
Confidence 431 11 11012345788876 7888888655422 1 2233444444556677888 99999999999999
Q ss_pred HHHHHhc------CCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHH
Q 044731 232 DYLKRKM------GHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGL 305 (443)
Q Consensus 232 ~~~~~~~------~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al 305 (443)
++++... . ++++.|||++..... +.. ...+ ++|.+|||+++++|||||||||+..++.+++.+++.+|
T Consensus 224 ~~~~~~~~~~~~~~-~~v~~vGPl~~~~~~---~~~-~~~~-~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL 297 (480)
T PLN00164 224 AAIADGRCTPGRPA-PTVYPIGPVISLAFT---PPA-EQPP-HECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGL 297 (480)
T ss_pred HHHHhccccccCCC-CceEEeCCCcccccc---CCC-ccch-HHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHH
Confidence 9998742 2 479999999853211 000 1234 68999999999999999999999999999999999999
Q ss_pred HhCCCceEEEEeCCcccc----CC-CCCCCCchhHHHHhhcCceEeecCCCc----------------------------
Q 044731 306 EKSGIRFLWVVKTSVIHA----EG-NGYGLIPYGFEERVAGRGLVLKGWVPQ---------------------------- 352 (443)
Q Consensus 306 ~~~~~~~lw~~~~~~~~~----~~-~~~~~lp~~~~~~~~~~~~vv~~W~PQ---------------------------- 352 (443)
+.++++|||+++.....+ .+ ...+.+|++|.+|++++|+++.+|+||
T Consensus 298 ~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~G 377 (480)
T PLN00164 298 ERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHG 377 (480)
T ss_pred HHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcC
Confidence 999999999999642100 00 111348999999999999999899999
Q ss_pred ---------ccchhhHHHHHhhcceeEEeecCC--CCCCCHHHHHHHHHHHhcC---c-hHHHHHHHHHHHHHHHHHhcC
Q 044731 353 ---------ADQFVNARLLVDDLRVAVLVCEGG--DSVPDSDELGKVIGESLSQ---C-GETKIKARELRDKALAAVKSG 417 (443)
Q Consensus 353 ---------~DQ~~na~~v~~~~g~G~~l~~~~--~~~~t~e~l~~ai~~vl~~---~-~~yr~~a~~l~~~~r~a~~~g 417 (443)
+||+.||+++++.||+|+.+.... .+.+++++|+++|+++|.+ + +.+|+||+++++.+++|+++|
T Consensus 378 VP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~g 457 (480)
T PLN00164 378 VPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEG 457 (480)
T ss_pred CCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999988889999996421 2357999999999999975 2 568999999999999999999
Q ss_pred CChHHHHHHHHHHHHhccc
Q 044731 418 GSSTRDLETLVQELRKLRF 436 (443)
Q Consensus 418 g~s~~~~~~~~~~~~~~~~ 436 (443)
|||++++++|++++...+.
T Consensus 458 GSS~~~l~~~v~~~~~~~~ 476 (480)
T PLN00164 458 GSSYAALQRLAREIRHGAV 476 (480)
T ss_pred CcHHHHHHHHHHHHHhccC
Confidence 9999999999999987765
No 17
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=5.1e-56 Score=443.16 Aligned_cols=391 Identities=26% Similarity=0.380 Sum_probs=294.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHH--HHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccccccc
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQ--LSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKEL 85 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~--L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 85 (443)
.+.||+++|+|++||++||++||++ |++||++|||++|+.+.++++........+++..++ +++|++...
T Consensus 7 ~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~~----~glp~~~~~---- 78 (456)
T PLN02210 7 QETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFS----DGLPKDDPR---- 78 (456)
T ss_pred CCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEECC----CCCCCCccc----
Confidence 3579999999999999999999999 559999999999998766554321101245555444 456654321
Q ss_pred CCCChHHHHHHH-hhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcc-cCCCC
Q 044731 86 GNRGNLPIMSAL-GKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNH-TGVVK 163 (443)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~-~~~~~ 163 (443)
....+...+ ..+.+.+++++++. ++||||+|.+..|+..+|+++|||.+.|++.+++.++.+.+++.. +....
T Consensus 79 ---~~~~~~~~~~~~~~~~l~~~l~~~--~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~ 153 (456)
T PLN02210 79 ---APETLLKSLNKVGAKNLSKIIEEK--RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPD 153 (456)
T ss_pred ---CHHHHHHHHHHhhhHHHHHHHhcC--CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCc
Confidence 111233333 45677788888876 799999999999999999999999999999998888877765321 11111
Q ss_pred --C-CCceecCCCCCCCcccCCCCChhhhhccCCCCChHH-HHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHhcC
Q 044731 164 --S-LDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEF-EFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKMG 239 (443)
Q Consensus 164 --~-~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~ 239 (443)
+ ..++.+|++|. ++..+++.++... + .... ..+.+.......+++ +++|||++||+++++++++.
T Consensus 154 ~~~~~~~~~~Pgl~~---~~~~dl~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~--vlvNTf~eLE~~~~~~l~~~-- 222 (456)
T PLN02210 154 LEDLNQTVELPALPL---LEVRDLPSFMLPS--G--GAHFNNLMAEFADCLRYVKW--VLVNSFYELESEIIESMADL-- 222 (456)
T ss_pred ccccCCeeeCCCCCC---CChhhCChhhhcC--C--chHHHHHHHHHHHhcccCCE--EEEeCHHHHhHHHHHHHhhc--
Confidence 1 12345777775 6777887655432 1 2222 223344445556778 99999999999999998773
Q ss_pred CCceeeeccccCCC----CCCC--CCC--CCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCc
Q 044731 240 HDRVFGVGPLSLLG----PEST--RGG--DSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIR 311 (443)
Q Consensus 240 ~~~v~~vGpl~~~~----~~~~--~~~--~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~ 311 (443)
+++++|||+++.. .... .+. .....+ .+|.+|||+++++|||||||||+...+.+++++++.+|+.++++
T Consensus 223 -~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~ 300 (456)
T PLN02210 223 -KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSD-DCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVP 300 (456)
T ss_pred -CCEEEEcccCchhhcCcccccccccccccccccc-hHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCC
Confidence 4799999998521 1000 000 001234 67999999998899999999999999999999999999999999
Q ss_pred eEEEEeCCccccCCCCCCCCchhHHHHh-hcCceEeecCCCc-------------------------------------c
Q 044731 312 FLWVVKTSVIHAEGNGYGLIPYGFEERV-AGRGLVLKGWVPQ-------------------------------------A 353 (443)
Q Consensus 312 ~lw~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~vv~~W~PQ-------------------------------------~ 353 (443)
|||+++.... ...+.++.+++ +++|+|+ +|+|| +
T Consensus 301 flw~~~~~~~-------~~~~~~~~~~~~~~~g~v~-~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~ 372 (456)
T PLN02210 301 FLWVIRPKEK-------AQNVQVLQEMVKEGQGVVL-EWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWT 372 (456)
T ss_pred EEEEEeCCcc-------ccchhhHHhhccCCCeEEE-ecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEeccccc
Confidence 9999985321 12345666676 4889887 99999 9
Q ss_pred cchhhHHHHHhhcceeEEeecCC-CCCCCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 044731 354 DQFVNARLLVDDLRVAVLVCEGG-DSVPDSDELGKVIGESLSQC--GETKIKARELRDKALAAVKSGGSSTRDLETLVQE 430 (443)
Q Consensus 354 DQ~~na~~v~~~~g~G~~l~~~~-~~~~t~e~l~~ai~~vl~~~--~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~ 430 (443)
||+.||+++++.||+|+.+.... .+.+++++|+++|+++|.++ ++||+||++|++.+++|+++||||++|+++|++.
T Consensus 373 DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~ 452 (456)
T PLN02210 373 DQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISD 452 (456)
T ss_pred ccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99999999998789999997421 24799999999999999763 4699999999999999999999999999999998
Q ss_pred HH
Q 044731 431 LR 432 (443)
Q Consensus 431 ~~ 432 (443)
+.
T Consensus 453 ~~ 454 (456)
T PLN02210 453 IT 454 (456)
T ss_pred Hh
Confidence 75
No 18
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=9.3e-56 Score=437.96 Aligned_cols=394 Identities=26% Similarity=0.419 Sum_probs=291.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCC--ceEEE--EeCCCCchhhh----hhccCCCCeeEEEeCCCCCCCCCCCcc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKN--LDITI--LITPKNLPIVS----SLLDARPAIQTLVLPFPSHPSVPAGVE 80 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rG--h~Vt~--~t~~~~~~~v~----~~~~~~~~i~~~~l~~~~~~~~~~~~~ 80 (443)
+-||+++|+|++||++||++||+.|+.+| +.||+ +++..+...+. +.....++|+++.+|++. ..+++..
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~--~~~~~~~ 80 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVT--PYSSSST 80 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCC--CCCCccc
Confidence 45999999999999999999999999998 45555 44543322211 111001368999887531 1111111
Q ss_pred cccccCCCChHHHHHHHhhhhHHHHHHHHhCC--CCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcc
Q 044731 81 NVKELGNRGNLPIMSALGKLYDPIIQWFHSHA--NPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNH 158 (443)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~--~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~ 158 (443)
. . ......+......+.+.+++++++.. .+++|||+|.+..|+..+|+++|||.+.|++++++.++++.+++..
T Consensus 81 ~--~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~ 156 (451)
T PLN03004 81 S--R--HHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTI 156 (451)
T ss_pred c--c--cCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhc
Confidence 1 0 01122334444556666777766531 2459999999999999999999999999999999998888876532
Q ss_pred c-CC-C---CCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHH
Q 044731 159 T-GV-V---KSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDY 233 (443)
Q Consensus 159 ~-~~-~---~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~ 233 (443)
. .. . .+..++.+||+|. ++..++|.++... . ......+.+......++++ +++|||++||+.++++
T Consensus 157 ~~~~~~~~~~~~~~v~iPg~p~---l~~~dlp~~~~~~--~--~~~~~~~~~~~~~~~~~~~--vl~NTf~eLE~~~l~~ 227 (451)
T PLN03004 157 DETTPGKNLKDIPTVHIPGVPP---MKGSDMPKAVLER--D--DEVYDVFIMFGKQLSKSSG--IIINTFDALENRAIKA 227 (451)
T ss_pred cccccccccccCCeecCCCCCC---CChHHCchhhcCC--c--hHHHHHHHHHHHhhcccCe--eeeeeHHHhHHHHHHH
Confidence 1 10 0 1112355788876 7888888766432 1 2334555555666677888 9999999999999999
Q ss_pred HHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceE
Q 044731 234 LKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFL 313 (443)
Q Consensus 234 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~l 313 (443)
++..+..+++++|||++......... ...+ .+|.+|||+++++|||||||||+..++.+++++++.+|+.++++||
T Consensus 228 l~~~~~~~~v~~vGPl~~~~~~~~~~---~~~~-~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~Fl 303 (451)
T PLN03004 228 ITEELCFRNIYPIGPLIVNGRIEDRN---DNKA-VSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFL 303 (451)
T ss_pred HHhcCCCCCEEEEeeeccCccccccc---cchh-hHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEE
Confidence 97753114799999998532110001 1123 5799999999889999999999999999999999999999999999
Q ss_pred EEEeCCcc--ccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------cc
Q 044731 314 WVVKTSVI--HAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------AD 354 (443)
Q Consensus 314 w~~~~~~~--~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~D 354 (443)
|+++.... ....+....+|++|.+|++++|+++.+|+|| +|
T Consensus 304 W~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~D 383 (451)
T PLN03004 304 WVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAE 383 (451)
T ss_pred EEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEecccccc
Confidence 99995311 0000111238999999999999988899999 99
Q ss_pred chhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHH
Q 044731 355 QFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTR 422 (443)
Q Consensus 355 Q~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~ 422 (443)
|+.||+++++.||+|+.++.+..+.++.++|+++|+++|.+ ++||+||+++++..+.|+++||||++
T Consensus 384 Q~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~-~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 384 QRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE-CPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred chhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999988899999975222468999999999999999 79999999999999999999999975
No 19
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.1e-54 Score=437.95 Aligned_cols=400 Identities=24% Similarity=0.369 Sum_probs=295.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCC--ceEEEEeCCCCchhh-------hhhccC-CCCeeEEEeCCCCCCCCCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKN--LDITILITPKNLPIV-------SSLLDA-RPAIQTLVLPFPSHPSVPAG 78 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rG--h~Vt~~t~~~~~~~v-------~~~~~~-~~~i~~~~l~~~~~~~~~~~ 78 (443)
|+||+++|+|++||++||++||+.|+.+| ..|||++|+.+..++ .+.... ..+|+++.+|++. ++.
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~ 77 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGD----QPT 77 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCC----CCc
Confidence 68999999999999999999999999998 899999998764321 111000 1358999887432 111
Q ss_pred cccccccCCCChHHHHHHHhhhhHHHHHHHHhC---CCC-CcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhh
Q 044731 79 VENVKELGNRGNLPIMSALGKLYDPIIQWFHSH---ANP-PVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDY 154 (443)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---~~~-~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~ 154 (443)
.. .. .....+......+.+.+++++.+. ..+ .+|||+|.+..|+..+|+++|||.+.|++++++.++.+++
T Consensus 78 ~~----~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~ 152 (481)
T PLN02554 78 TE----DP-TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLH 152 (481)
T ss_pred cc----ch-HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHh
Confidence 00 00 111111112234555566655431 113 4899999999999999999999999999999999998888
Q ss_pred hhcccC---CC----CC-CCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhh
Q 044731 155 CWNHTG---VV----KS-LDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDL 226 (443)
Q Consensus 155 ~~~~~~---~~----~~-~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l 226 (443)
++.... .. .+ ..++.+|+++. +++..++|.++.. ..+...+.+......++++ +++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~v~iPgl~~--pl~~~dlp~~~~~------~~~~~~~~~~~~~~~~~~g--vlvNt~~eL 222 (481)
T PLN02554 153 VQMLYDEKKYDVSELEDSEVELDVPSLTR--PYPVKCLPSVLLS------KEWLPLFLAQARRFREMKG--ILVNTVAEL 222 (481)
T ss_pred hhhhccccccCccccCCCCceeECCCCCC--CCCHHHCCCcccC------HHHHHHHHHHHHhcccCCE--EEEechHHH
Confidence 754311 11 01 12345777731 1666777754431 2234445555666777889 999999999
Q ss_pred hHHHHHHHHHh--cCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHH
Q 044731 227 ESEYLDYLKRK--MGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALG 304 (443)
Q Consensus 227 ~~~~~~~~~~~--~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~a 304 (443)
|+.+...+++. .. |++++|||++....... ... ...+ ++|.+|||+++++|||||||||+..++.+++++++.+
T Consensus 223 e~~~~~~l~~~~~~~-~~v~~vGpl~~~~~~~~-~~~-~~~~-~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~ 298 (481)
T PLN02554 223 EPQALKFFSGSSGDL-PPVYPVGPVLHLENSGD-DSK-DEKQ-SEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIA 298 (481)
T ss_pred hHHHHHHHHhcccCC-CCEEEeCCCcccccccc-ccc-cccc-hHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHH
Confidence 99999888763 23 68999999953221100 000 1133 6799999999888999999999999999999999999
Q ss_pred HHhCCCceEEEEeCCccc------cC-CCCCCCCchhHHHHhhcCceEeecCCCc-------------------------
Q 044731 305 LEKSGIRFLWVVKTSVIH------AE-GNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------- 352 (443)
Q Consensus 305 l~~~~~~~lw~~~~~~~~------~~-~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------- 352 (443)
|+.++++|||+++..... +. .+..+.+|++|.+|+++|++++ +|+||
T Consensus 299 l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~-~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~ 377 (481)
T PLN02554 299 LERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVI-GWAPQVAVLAKPAIGGFVTHCGWNSILESL 377 (481)
T ss_pred HHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEE-eeCCHHHHhCCcccCcccccCccchHHHHH
Confidence 999999999999863110 00 0111237999999999999998 99999
Q ss_pred ------------ccchhhHHHHHhhcceeEEeecC--------CCCCCCHHHHHHHHHHHhc-CchHHHHHHHHHHHHHH
Q 044731 353 ------------ADQFVNARLLVDDLRVAVLVCEG--------GDSVPDSDELGKVIGESLS-QCGETKIKARELRDKAL 411 (443)
Q Consensus 353 ------------~DQ~~na~~v~~~~g~G~~l~~~--------~~~~~t~e~l~~ai~~vl~-~~~~yr~~a~~l~~~~r 411 (443)
+||+.||+++++.||+|+.++.. ..+.+++++|+++|+++|. + ++||+||++++++++
T Consensus 378 ~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~-~~~r~~a~~l~~~~~ 456 (481)
T PLN02554 378 WFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD-SDVRKRVKEMSEKCH 456 (481)
T ss_pred HcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHH
Confidence 99999998777777999999631 1246899999999999997 7 799999999999999
Q ss_pred HHHhcCCChHHHHHHHHHHHHh
Q 044731 412 AAVKSGGSSTRDLETLVQELRK 433 (443)
Q Consensus 412 ~a~~~gg~s~~~~~~~~~~~~~ 433 (443)
+|+.+||||++|+++|++++.+
T Consensus 457 ~av~~gGss~~~l~~lv~~~~~ 478 (481)
T PLN02554 457 VALMDGGSSHTALKKFIQDVTK 478 (481)
T ss_pred HHhcCCChHHHHHHHHHHHHHh
Confidence 9999999999999999999875
No 20
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.8e-54 Score=431.61 Aligned_cols=394 Identities=25% Similarity=0.403 Sum_probs=297.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKE 84 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 84 (443)
..+.||+++|+|++||++||++||++|+.| ||+|||++++.+..++..... ..+++|+.+|. +++++.....
T Consensus 8 ~~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~-~~gi~fv~lp~----~~p~~~~~~~- 81 (459)
T PLN02448 8 TTSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPK-PDNIRFATIPN----VIPSELVRAA- 81 (459)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCC-CCCEEEEECCC----CCCCcccccc-
Confidence 457899999999999999999999999999 999999999987766655211 24799998873 3443321111
Q ss_pred cCCCChHHHHHH-HhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccC---
Q 044731 85 LGNRGNLPIMSA-LGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTG--- 160 (443)
Q Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~--- 160 (443)
+.. .+... ...+.+.+++++++...++||||+|.+..|+..+|+++|||.+.|+++++..++.+.+++....
T Consensus 82 ---~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~ 157 (459)
T PLN02448 82 ---DFP-GFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGH 157 (459)
T ss_pred ---CHH-HHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccC
Confidence 122 23333 3456777888887643368999999999999999999999999999999988777766642210
Q ss_pred CCCC-----CCce-ecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHH
Q 044731 161 VVKS-----LDVV-EFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYL 234 (443)
Q Consensus 161 ~~~~-----~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~ 234 (443)
...+ ...+ .+|+++. ++..+++.++... . ....+.+.+......++++ +++|||++||+.+++++
T Consensus 158 ~~~~~~~~~~~~~~~iPg~~~---l~~~dlp~~~~~~--~--~~~~~~~~~~~~~~~~~~~--vlvNTf~eLE~~~~~~l 228 (459)
T PLN02448 158 FPVELSESGEERVDYIPGLSS---TRLSDLPPIFHGN--S--RRVLKRILEAFSWVPKAQY--LLFTSFYELEAQAIDAL 228 (459)
T ss_pred CCCccccccCCccccCCCCCC---CChHHCchhhcCC--c--hHHHHHHHHHHhhcccCCE--EEEccHHHhhHHHHHHH
Confidence 0000 0111 3566654 6667777654321 1 2334455555555666778 99999999999999999
Q ss_pred HHhcCCCceeeeccccCCCCCC-CCCC-CCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCce
Q 044731 235 KRKMGHDRVFGVGPLSLLGPES-TRGG-DSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRF 312 (443)
Q Consensus 235 ~~~~~~~~v~~vGpl~~~~~~~-~~~~-~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~ 312 (443)
+..++ ++++.|||+.+..... .... .....+ .+|.+||+++++++||||||||+..++.+++++++.+|+.++++|
T Consensus 229 ~~~~~-~~~~~iGP~~~~~~~~~~~~~~~~~~~~-~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~ 306 (459)
T PLN02448 229 KSKFP-FPVYPIGPSIPYMELKDNSSSSNNEDNE-PDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRF 306 (459)
T ss_pred HhhcC-CceEEecCcccccccCCCccccccccch-hHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCE
Confidence 88776 6899999997532110 0000 001122 479999999888999999999999899999999999999999999
Q ss_pred EEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccc
Q 044731 313 LWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQ 355 (443)
Q Consensus 313 lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ 355 (443)
||+++... .++.++.+++++++ +|+|| +||
T Consensus 307 lw~~~~~~------------~~~~~~~~~~~~v~-~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ 373 (459)
T PLN02448 307 LWVARGEA------------SRLKEICGDMGLVV-PWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQ 373 (459)
T ss_pred EEEEcCch------------hhHhHhccCCEEEe-ccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccc
Confidence 99887431 23444555688888 99999 999
Q ss_pred hhhHHHHHhhcceeEEeecC--CCCCCCHHHHHHHHHHHhcC---c-hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 044731 356 FVNARLLVDDLRVAVLVCEG--GDSVPDSDELGKVIGESLSQ---C-GETKIKARELRDKALAAVKSGGSSTRDLETLVQ 429 (443)
Q Consensus 356 ~~na~~v~~~~g~G~~l~~~--~~~~~t~e~l~~ai~~vl~~---~-~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~ 429 (443)
+.||+++++.||+|+.+..+ ..+.+|+++|+++|+++|.+ + ++||+||+++++.+++|+.+||||++|+++|++
T Consensus 374 ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~ 453 (459)
T PLN02448 374 PLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIR 453 (459)
T ss_pred hhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 99999999989999999642 12468999999999999975 2 589999999999999999999999999999999
Q ss_pred HHHhc
Q 044731 430 ELRKL 434 (443)
Q Consensus 430 ~~~~~ 434 (443)
+++..
T Consensus 454 ~~~~~ 458 (459)
T PLN02448 454 DISQG 458 (459)
T ss_pred HHhcc
Confidence 99864
No 21
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.5e-54 Score=432.70 Aligned_cols=407 Identities=26% Similarity=0.424 Sum_probs=291.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCc---eEEEEeCCCCch-----hhhhhccCCCCeeEEEeCCCCCCCCCCCc
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNL---DITILITPKNLP-----IVSSLLDARPAIQTLVLPFPSHPSVPAGV 79 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh---~Vt~~t~~~~~~-----~v~~~~~~~~~i~~~~l~~~~~~~~~~~~ 79 (443)
++.||+++|+|++||++||++||+.|+.+|. .||++++..+.. .+.+.....++|+|+.+|++. + +++.
T Consensus 2 ~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~--~-p~~~ 78 (475)
T PLN02167 2 KEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQ--D-PPPM 78 (475)
T ss_pred CccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCC--C-Cccc
Confidence 4579999999999999999999999999993 567766543211 122111101369999888542 1 2111
Q ss_pred ccccccCCCChHHHHHHHhhhh----HHHHHHHHhC---CC-CCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHH
Q 044731 80 ENVKELGNRGNLPIMSALGKLY----DPIIQWFHSH---AN-PPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASV 151 (443)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~~~---~~-~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~ 151 (443)
+.... .....+...+..+. +.+++++.+. .. +++|||+|.+..|+..+|+++|||.+.|++++++.++.
T Consensus 79 ~~~~~---~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~ 155 (475)
T PLN02167 79 ELFVK---ASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGM 155 (475)
T ss_pred ccccc---chHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHH
Confidence 10000 01122333333333 4444433221 11 35999999999999999999999999999999988888
Q ss_pred Hhhhhcc-cCCC------CCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCch
Q 044731 152 SDYCWNH-TGVV------KSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFD 224 (443)
Q Consensus 152 ~~~~~~~-~~~~------~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 224 (443)
+++++.. +... ...+++.+||++. .++..++|.+.... . ..+.+.+......++++ +++|||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~--~l~~~dlp~~~~~~-----~-~~~~~~~~~~~~~~a~~--vlvNTf~ 225 (475)
T PLN02167 156 MKYLPERHRKTASEFDLSSGEEELPIPGFVN--SVPTKVLPPGLFMK-----E-SYEAWVEIAERFPEAKG--ILVNSFT 225 (475)
T ss_pred HHHHHHhccccccccccCCCCCeeECCCCCC--CCChhhCchhhhCc-----c-hHHHHHHHHHhhcccCE--eeeccHH
Confidence 7766532 1111 1113455788742 16667777544321 1 23334455556677888 9999999
Q ss_pred hhhHHHHHHHHHhcC-CCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHH
Q 044731 225 DLESEYLDYLKRKMG-HDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALAL 303 (443)
Q Consensus 225 ~l~~~~~~~~~~~~~-~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~ 303 (443)
+||+.++++++.... .|++++|||+++........ .....+ ++|.+|||+++++|||||||||+..++.+++.+++.
T Consensus 226 eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~-~~~~~~-~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~ 303 (475)
T PLN02167 226 ELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPN-LDSSDR-DRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQ 303 (475)
T ss_pred HHHHHHHHHHHhhcccCCeeEEeccccccccccCCC-CCcchh-HHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHH
Confidence 999999999876411 15899999998632210000 001123 579999999988999999999999999999999999
Q ss_pred HHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------
Q 044731 304 GLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------------- 352 (443)
Q Consensus 304 al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------------- 352 (443)
+|+.++++|||+++.+.... ......+|++|.+|++++|+++ +|+||
T Consensus 304 ~l~~~~~~flw~~~~~~~~~-~~~~~~lp~~~~er~~~rg~v~-~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~ 381 (475)
T PLN02167 304 ALELVGCRFLWSIRTNPAEY-ASPYEPLPEGFMDRVMGRGLVC-GWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPI 381 (475)
T ss_pred HHHhCCCcEEEEEecCcccc-cchhhhCChHHHHHhccCeeee-ccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCE
Confidence 99999999999998632100 0112458999999999999988 99999
Q ss_pred ------ccchhhHHHHHhhcceeEEeecCC----CCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHH
Q 044731 353 ------ADQFVNARLLVDDLRVAVLVCEGG----DSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTR 422 (443)
Q Consensus 353 ------~DQ~~na~~v~~~~g~G~~l~~~~----~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~ 422 (443)
+||+.||+++++.||+|+.+.... .+.+++++|+++|+++|.+++.||+||+++++.+++|+++||||++
T Consensus 382 l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~ 461 (475)
T PLN02167 382 ATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFV 461 (475)
T ss_pred EeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 999999998777889999996421 1357999999999999975248999999999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 044731 423 DLETLVQELRKL 434 (443)
Q Consensus 423 ~~~~~~~~~~~~ 434 (443)
|+++|+++|...
T Consensus 462 ~l~~~v~~i~~~ 473 (475)
T PLN02167 462 AVKRFIDDLLGD 473 (475)
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=9.6e-36 Score=301.26 Aligned_cols=373 Identities=16% Similarity=0.159 Sum_probs=234.3
Q ss_pred CcEEEEE-cCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccccc----
Q 044731 9 ATHVLIF-PYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVK---- 83 (443)
Q Consensus 9 ~~~ili~-~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~---- 83 (443)
..+|+++ |.++.||+..+..++++|++|||+||++++.... ...... ..+++.+.++... +..........
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~-~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~~~ 95 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRV-YYASHL--CGNITEIDASLSV-EYFKKLVKSSAVFRK 95 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEeccccc-ccccCC--CCCEEEEEcCCCh-HHHHHHHhhhhHHHh
Confidence 3467755 8899999999999999999999999999875321 110000 2456666554221 00000000000
Q ss_pred --ccCC--C----ChHHHHHHHhh-h-hHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHh-CCCceeEechhHHHHHHH
Q 044731 84 --ELGN--R----GNLPIMSALGK-L-YDPIIQWFHSHANPPVAILSDFFLGWTLNLAREL-NIVRITFFSSGSFLASVS 152 (443)
Q Consensus 84 --~~~~--~----~~~~~~~~~~~-~-~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~l-giP~i~~~~~~~~~~~~~ 152 (443)
.... . ....+...+.. + .+.+.+++++...+||++|+|.+..|++.+|+++ ++|.|.+++++.......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~ 175 (507)
T PHA03392 96 RGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFE 175 (507)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHH
Confidence 0000 0 00111122221 1 4556677762122899999999989999999999 999988877654322110
Q ss_pred hhhhcccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCC------------CChHHHHHHHH--------Hhhhhc
Q 044731 153 DYCWNHTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSD------------SDPEFEFVKDG--------MVANTL 212 (443)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~--------~~~~~~ 212 (443)
.. ++ .+..+..+|.+. ....+-+.+..+..... .....+...+. .+...+
T Consensus 176 -~~---gg--~p~~~syvP~~~----~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~ 245 (507)
T PHA03392 176 -TM---GA--VSRHPVYYPNLW----RSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNR 245 (507)
T ss_pred -hh---cc--CCCCCeeeCCcc----cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhC
Confidence 00 10 111123333332 23333333333221000 00000001111 111223
Q ss_pred cCccEEEEcCchhhhHHHHHHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCc-
Q 044731 213 SWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQK- 291 (443)
Q Consensus 213 ~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~- 291 (443)
... +++|+...++.+ |+ ++ |++++|||++.+... . ...+ +++.+||++++ +++|||||||+.
T Consensus 246 ~~l--~lvns~~~~d~~-----rp-~~-p~v~~vGgi~~~~~~-----~-~~l~-~~l~~fl~~~~-~g~V~vS~GS~~~ 308 (507)
T PHA03392 246 VQL--LFVNVHPVFDNN-----RP-VP-PSVQYLGGLHLHKKP-----P-QPLD-DYLEEFLNNST-NGVVYVSFGSSID 308 (507)
T ss_pred CcE--EEEecCccccCC-----CC-CC-CCeeeecccccCCCC-----C-CCCC-HHHHHHHhcCC-CcEEEEECCCCCc
Confidence 345 788988877654 33 45 899999999874311 0 2245 78999999754 579999999985
Q ss_pred --cCCHHHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------
Q 044731 292 --VLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ----------------- 352 (443)
Q Consensus 292 --~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ----------------- 352 (443)
.++.+.++.++++|++.+++|||+++..... ..+|+ |.+++ +|+||
T Consensus 309 ~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~------~~~p~--------Nv~i~-~w~Pq~~lL~hp~v~~fItHGG 373 (507)
T PHA03392 309 TNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEA------INLPA--------NVLTQ-KWFPQRAVLKHKNVKAFVTQGG 373 (507)
T ss_pred CCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCc------ccCCC--------ceEEe-cCCCHHHHhcCCCCCEEEecCC
Confidence 3688899999999999999999998854210 12344 44566 99999
Q ss_pred --------------------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 044731 353 --------------------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALA 412 (443)
Q Consensus 353 --------------------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~ 412 (443)
+||+.||+|+++. |+|+.++. ..+|+++|++||++++++ ++||+||+++++.+++
T Consensus 374 ~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~---~~~t~~~l~~ai~~vl~~-~~y~~~a~~ls~~~~~ 448 (507)
T PHA03392 374 VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDT---VTVSAAQLVLAIVDVIEN-PKYRKNLKELRHLIRH 448 (507)
T ss_pred cccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEecc---CCcCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHh
Confidence 9999999999987 99999996 789999999999999999 8999999999999997
Q ss_pred HHhcCCChHHHHHHHHHHHHhcc
Q 044731 413 AVKSGGSSTRDLETLVQELRKLR 435 (443)
Q Consensus 413 a~~~gg~s~~~~~~~~~~~~~~~ 435 (443)
+.-.. ...+-..+|++...+
T Consensus 449 --~p~~~-~~~av~~iE~v~r~~ 468 (507)
T PHA03392 449 --QPMTP-LHKAIWYTEHVIRNK 468 (507)
T ss_pred --CCCCH-HHHHHHHHHHHHhCC
Confidence 22223 344456677776655
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.6e-35 Score=303.68 Aligned_cols=343 Identities=20% Similarity=0.221 Sum_probs=184.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCC-CCCCCCCcccc-cc-cC-
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPS-HPSVPAGVENV-KE-LG- 86 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~-~~~~~~~~~~~-~~-~~- 86 (443)
+|+++|. +.||+++|.+++++|++|||+||++++... ..+.... ...+++..++.+. ........... .. ..
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPS-SSLNPSK--PSNIRFETYPDPYPEEEFEEIFPEFISKFFSE 77 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHHHHH-HT--------S-CCEEEE-----TT------TTHHHHHHHH
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeecc-ccccccc--ccceeeEEEcCCcchHHHhhhhHHHHHHHhhh
Confidence 6788885 789999999999999999999999987431 1111111 1445555554321 11111111100 00 00
Q ss_pred CCChHHHHH---HH----h----hh-----hHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHH
Q 044731 87 NRGNLPIMS---AL----G----KL-----YDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLAS 150 (443)
Q Consensus 87 ~~~~~~~~~---~~----~----~~-----~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~ 150 (443)
......+.. .. . .+ ...+.+.+++. +||++|+|.+.+|+..+|+.+|+|.+.+.+......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~--~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~- 154 (500)
T PF00201_consen 78 SSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKSE--KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYD- 154 (500)
T ss_dssp HCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHHH--HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSC-
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh--ccccceEeeccchhHHHHHHhcCCeEEEecccccch-
Confidence 000011111 00 0 01 11222233444 799999999999999999999999876544321110
Q ss_pred HHhhhhcccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHH-HHhhh-------------------
Q 044731 151 VSDYCWNHTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKD-GMVAN------------------- 210 (443)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------- 210 (443)
..... ...+..+..+|... ....+-+.+..+.. ..+.....+ .....
T Consensus 155 ----~~~~~-~g~p~~psyvP~~~----s~~~~~msf~~Ri~----N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (500)
T PF00201_consen 155 ----LSSFS-GGVPSPPSYVPSMF----SDFSDRMSFWQRIK----NFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFR 221 (500)
T ss_dssp ----CTCCT-SCCCTSTTSTTCBC----CCSGTTSSSST--T----TSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCH
T ss_pred ----hhhhc-cCCCCChHHhcccc----ccCCCccchhhhhh----hhhhhhhhccccccchhhHHHHHhhhcccccccH
Confidence 00000 00000011111110 11112222222111 111111111 11111
Q ss_pred ---hccCccEEEEcCchhhhHHHHHHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEec
Q 044731 211 ---TLSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACF 287 (443)
Q Consensus 211 ---~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSf 287 (443)
.+... +++|+...+ ++.|+.. |++++|||++...+. ..+ +++..|+++..+++||||||
T Consensus 222 ~~~~~~~l--~l~ns~~~l-----d~prp~~--p~v~~vGgl~~~~~~--------~l~-~~~~~~~~~~~~~~vv~vsf 283 (500)
T PF00201_consen 222 ELLSNASL--VLINSHPSL-----DFPRPLL--PNVVEVGGLHIKPAK--------PLP-EELWNFLDSSGKKGVVYVSF 283 (500)
T ss_dssp HHHHHHHH--CCSSTEEE---------HHHH--CTSTTGCGC-S------------TCH-HHHHHHTSTTTTTEEEEEE-
T ss_pred HHHHHHHH--HhhhccccC-----cCCcchh--hcccccCcccccccc--------ccc-cccchhhhccCCCCEEEEec
Confidence 11111 334444333 3345544 699999999875432 245 78999999855778999999
Q ss_pred CCCcc-CCHHHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc--------------
Q 044731 288 GSQKV-LSKEQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------- 352 (443)
Q Consensus 288 GS~~~-~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------- 352 (443)
||+.. ++.+.+++++++|++++++|||+++... +. .++.|.+++ +|+||
T Consensus 284 Gs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~-----------~~----~l~~n~~~~-~W~PQ~~lL~hp~v~~fit 347 (500)
T PF00201_consen 284 GSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEP-----------PE----NLPKNVLIV-KWLPQNDLLAHPRVKLFIT 347 (500)
T ss_dssp TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSH-----------GC----HHHTTEEEE-SS--HHHHHTSTTEEEEEE
T ss_pred CcccchhHHHHHHHHHHHHhhCCCcccccccccc-----------cc----cccceEEEe-ccccchhhhhcccceeeee
Confidence 99874 5556689999999999999999998632 11 123455666 99999
Q ss_pred -----------------------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 044731 353 -----------------------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDK 409 (443)
Q Consensus 353 -----------------------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~ 409 (443)
+||+.||+++++. |+|+.++. ..+|+++|++||++||+| ++||+||++++++
T Consensus 348 HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~---~~~~~~~l~~ai~~vl~~-~~y~~~a~~ls~~ 422 (500)
T PF00201_consen 348 HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLDK---NDLTEEELRAAIREVLEN-PSYKENAKRLSSL 422 (500)
T ss_dssp S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEGG---GC-SHHHHHHHHHHHHHS-HHHHHHHHHHHHT
T ss_pred ccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEEe---cCCcHHHHHHHHHHHHhh-hHHHHHHHHHHHH
Confidence 9999999999988 99999997 799999999999999999 8999999999999
Q ss_pred HHH
Q 044731 410 ALA 412 (443)
Q Consensus 410 ~r~ 412 (443)
+|+
T Consensus 423 ~~~ 425 (500)
T PF00201_consen 423 FRD 425 (500)
T ss_dssp TT-
T ss_pred Hhc
Confidence 986
No 24
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.97 E-value=3.2e-29 Score=249.24 Aligned_cols=329 Identities=15% Similarity=0.097 Sum_probs=202.3
Q ss_pred cCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccC-CCChHHHH
Q 044731 16 PYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELG-NRGNLPIM 94 (443)
Q Consensus 16 ~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 94 (443)
.+|+.||++|++.||++|++|||+|||++++.+.+.++. .|+.+.+++..... +.......... ......+.
T Consensus 2 ~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~-----~G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 74 (392)
T TIGR01426 2 NIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEA-----AGAEFVLYGSALPP--PDNPPENTEEEPIDIIEKLL 74 (392)
T ss_pred CCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHH-----cCCEEEecCCcCcc--ccccccccCcchHHHHHHHH
Confidence 578999999999999999999999999999888877776 68888877642110 10000000000 01112222
Q ss_pred HHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCCCceecCCCC
Q 044731 95 SALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSLDVVEFRDLP 174 (443)
Q Consensus 95 ~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p 174 (443)
.....+.+.+.++++.. +||+||+|.+..++..+|+++|||+|.+++..... ..+ +...|.+.
T Consensus 75 ~~~~~~~~~l~~~~~~~--~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~-----------~~~~~~~~ 137 (392)
T TIGR01426 75 DEAEDVLPQLEEAYKGD--RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEF-----------EEMVSPAG 137 (392)
T ss_pred HHHHHHHHHHHHHhcCC--CCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----ccc-----------cccccccc
Confidence 22222333444555555 89999999988888899999999999886543211 000 00000000
Q ss_pred CCCcccCCCCC-hhhhhccCCCCChHHHHHHHHHhh------h--hccCccEEEEcCchhhhHHHHHHHHHhcCCCceee
Q 044731 175 RSPVFKEEHLP-TVFRIYMVSDSDPEFEFVKDGMVA------N--TLSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFG 245 (443)
Q Consensus 175 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~ 245 (443)
... ....... ...... . ..+.++..+..-. + ..... .+..+ ++.+...+..++ +++.+
T Consensus 138 ~~~-~~~~~~~~~~~~~~--~--~~~~~~r~~~gl~~~~~~~~~~~~~~~--~l~~~-----~~~l~~~~~~~~-~~~~~ 204 (392)
T TIGR01426 138 EGS-AEEGAIAERGLAEY--V--ARLSALLEEHGITTPPVEFLAAPRRDL--NLVYT-----PKAFQPAGETFD-DSFTF 204 (392)
T ss_pred hhh-hhhhccccchhHHH--H--HHHHHHHHHhCCCCCCHHHHhcCCcCc--EEEeC-----ChHhCCCccccC-CCeEE
Confidence 000 0000000 000000 0 0011111111000 0 00000 12222 223333344567 88999
Q ss_pred eccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCCccccCC
Q 044731 246 VGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEG 325 (443)
Q Consensus 246 vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~ 325 (443)
+||+..... +...|+...+++++|||||||+.....+.++.++++|.+.+.+++|........
T Consensus 205 ~Gp~~~~~~--------------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~--- 267 (392)
T TIGR01426 205 VGPCIGDRK--------------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP--- 267 (392)
T ss_pred ECCCCCCcc--------------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh---
Confidence 999875321 112366655667899999999876666788899999999999999887543210
Q ss_pred CCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccchhhHHHHHhhcceeE
Q 044731 326 NGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQFVNARLLVDDLRVAV 370 (443)
Q Consensus 326 ~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~~na~~v~~~~g~G~ 370 (443)
..+ ...+.+..+. +|+|| +||+.||+++++. |+|+
T Consensus 268 -------~~~-~~~~~~v~~~-~~~p~~~ll~~~~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~-g~g~ 337 (392)
T TIGR01426 268 -------ADL-GELPPNVEVR-QWVPQLEILKKADAFITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGR 337 (392)
T ss_pred -------hHh-ccCCCCeEEe-CCCCHHHHHhhCCEEEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC-CCEE
Confidence 011 1123344455 99998 8999999999877 9999
Q ss_pred EeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 044731 371 LVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALA 412 (443)
Q Consensus 371 ~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~ 412 (443)
.+.. ..++.++|.++|+++|.+ ++|+++++++++.+++
T Consensus 338 ~l~~---~~~~~~~l~~ai~~~l~~-~~~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 338 HLPP---EEVTAEKLREAVLAVLSD-PRYAERLRKMRAEIRE 375 (392)
T ss_pred Eecc---ccCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9885 688999999999999999 8999999999999985
No 25
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.97 E-value=1.8e-30 Score=266.28 Aligned_cols=364 Identities=26% Similarity=0.279 Sum_probs=209.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCee---EEEeCCCC-CCCCCCCcccccc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQ---TLVLPFPS-HPSVPAGVENVKE 84 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~---~~~l~~~~-~~~~~~~~~~~~~ 84 (443)
+.|++++++|++||++|++++|+.|+++||+||++++............ ...+. ....++.. .+++++.......
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSK-SKSIKKINPPPFEFLTIPDGLPEGWEDDDL 83 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCccc-ceeeeeeecChHHhhhhhhhhccchHHHHH
Confidence 5789999999999999999999999999999999998765433221000 00111 11111100 0112222111100
Q ss_pred cCCCChHHHHHHHh-hhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhC-CCceeEechhHHHHHHHhhhhcccCCC
Q 044731 85 LGNRGNLPIMSALG-KLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELN-IVRITFFSSGSFLASVSDYCWNHTGVV 162 (443)
Q Consensus 85 ~~~~~~~~~~~~~~-~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lg-iP~i~~~~~~~~~~~~~~~~~~~~~~~ 162 (443)
........+...+. .+......+......+||++|+|.+..|...+|.... ++...+++.++....+..+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~----- 158 (496)
T KOG1192|consen 84 DISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPL----- 158 (496)
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcc-----
Confidence 00000112222222 2222232322222224999999998777777777765 8888888777766554332211
Q ss_pred CCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHH-------------HHHHHHHhhh----hccCccEEEEcC-ch
Q 044731 163 KSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEF-------------EFVKDGMVAN----TLSWGWGCVFNS-FD 224 (443)
Q Consensus 163 ~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~----~~~~~~~~~~n~-~~ 224 (443)
..+|.... ....+...+..+.......... .......... ..... ++.|+ +.
T Consensus 159 -----~~~p~~~~---~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~ 228 (496)
T KOG1192|consen 159 -----SYVPSPFS---LSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASG--IIVNASFI 228 (496)
T ss_pred -----cccCcccC---ccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHH--hhhcCeEE
Confidence 11111110 0000111111110000000000 0000010000 11112 34444 55
Q ss_pred hhhHHHHHHHHHh-cCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCC--cEEEEecCCCc---cCCHHHH
Q 044731 225 DLESEYLDYLKRK-MGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDG--SVVYACFGSQK---VLSKEQM 298 (443)
Q Consensus 225 ~l~~~~~~~~~~~-~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~--~vVyvSfGS~~---~~~~~~~ 298 (443)
.++.......++. .. +++++|||++..... . .. ..+.+|++..+.. +||||||||+. .++++++
T Consensus 229 ~ln~~~~~~~~~~~~~-~~v~~IG~l~~~~~~-------~-~~-~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~ 298 (496)
T KOG1192|consen 229 FLNSNPLLDFEPRPLL-PKVIPIGPLHVKDSK-------Q-KS-PLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQK 298 (496)
T ss_pred EEccCcccCCCCCCCC-CCceEECcEEecCcc-------c-cc-cccHHHHHHHhhccCCeEEEECCcccccccCCHHHH
Confidence 5554433232122 24 799999999986332 1 11 2467888876665 89999999998 8999999
Q ss_pred HHHHHHHHhC-CCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------
Q 044731 299 EALALGLEKS-GIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------- 352 (443)
Q Consensus 299 ~~i~~al~~~-~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------- 352 (443)
.+++.||+.+ +++|||+++.+.. ..+++++.++ ...+++..+|+||
T Consensus 299 ~~l~~~l~~~~~~~FiW~~~~~~~-------~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~ 370 (496)
T KOG1192|consen 299 KELAKALESLQGVTFLWKYRPDDS-------IYFPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLES 370 (496)
T ss_pred HHHHHHHHhCCCceEEEEecCCcc-------hhhhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHH
Confidence 9999999999 8899999997531 1133444322 1122333389999
Q ss_pred -------------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 044731 353 -------------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKAL 411 (443)
Q Consensus 353 -------------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r 411 (443)
+||+.||+++++++++++... ..++.+++.+++++++++ ++|+++|+++++.++
T Consensus 371 ~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~----~~~~~~~~~~~~~~il~~-~~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 371 IYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDK----RDLVSEELLEAIKEILEN-EEYKEAAKRLSEILR 437 (496)
T ss_pred HhcCCceecCCccccchhHHHHHHhCCCEEEEeh----hhcCcHHHHHHHHHHHcC-hHHHHHHHHHHHHHH
Confidence 999999999999955555555 566666699999999999 799999999999887
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.96 E-value=5.1e-29 Score=248.62 Aligned_cols=346 Identities=13% Similarity=0.074 Sum_probs=202.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccccc----cc
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVK----EL 85 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~----~~ 85 (443)
|||+|+++|+.||++|+++||++|++|||+|+|++++.+...++. .|++|.+++..... ......... ..
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~-----~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 74 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEA-----AGLEFVPVGGDPDE-LLASPERNAGLLLLG 74 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHH-----cCCceeeCCCCHHH-HHhhhhhcccccccc
Confidence 689999999999999999999999999999999999877766665 68888877532100 000000000 00
Q ss_pred CC---CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCC
Q 044731 86 GN---RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVV 162 (443)
Q Consensus 86 ~~---~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~ 162 (443)
.. .....+...+..+...+.+.+++. ++|+||+|.+..++..+|+++|||+|.+++++.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~------------ 140 (401)
T cd03784 75 PGLLLGALRLLRREAEAMLDDLVAAARDW--GPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTS------------ 140 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccc------------
Confidence 00 011112222223333334444455 8999999998888889999999999999886532100
Q ss_pred CCCCceecCCCCCCCcccCC-CCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEE------cCch--hhhHHHHHH
Q 044731 163 KSLDVVEFRDLPRSPVFKEE-HLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVF------NSFD--DLESEYLDY 233 (443)
Q Consensus 163 ~~~~~~~~p~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------n~~~--~l~~~~~~~ 233 (443)
..++. .... ......... ..+...........++..+ +-. .... ....+.+..
T Consensus 141 ---------~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g--l~~~~~~~~~~~~~~~~~~~~~~~ 202 (401)
T cd03784 141 ---------AFPPP--LGRANLRLYALLEA-----ELWQDLLGAWLRARRRRLG--LPPLSLLDGSDVPELYGFSPAVLP 202 (401)
T ss_pred ---------cCCCc--cchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhcC--CCCCcccccCCCcEEEecCcccCC
Confidence 00100 1000 000000000 0011111111111111111 100 0000 000111111
Q ss_pred HHHhcCCCceeeec-cccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCH-HHHHHHHHHHHhCCCc
Q 044731 234 LKRKMGHDRVFGVG-PLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSK-EQMEALALGLEKSGIR 311 (443)
Q Consensus 234 ~~~~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~-~~~~~i~~al~~~~~~ 311 (443)
..+.++ ++...+| ++...... ...+ .++..|+++ ++++|||||||+..... +.+..+++++...+.+
T Consensus 203 ~~~~~~-~~~~~~g~~~~~~~~~-------~~~~-~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~ 271 (401)
T cd03784 203 PPPDWP-RFDLVTGYGFRDVPYN-------GPPP-PELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQR 271 (401)
T ss_pred CCCCcc-ccCcEeCCCCCCCCCC-------CCCC-HHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCe
Confidence 122334 4555664 33322211 1233 567788875 35699999999976544 5667899999999999
Q ss_pred eEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccch
Q 044731 312 FLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQF 356 (443)
Q Consensus 312 ~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~ 356 (443)
+||..+..... ...+ +++.++. +|+|| +||+
T Consensus 272 ~i~~~g~~~~~-----~~~~--------~~~v~~~-~~~p~~~ll~~~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~ 337 (401)
T cd03784 272 AILSLGWGGLG-----AEDL--------PDNVRVV-DFVPHDWLLPRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQP 337 (401)
T ss_pred EEEEccCcccc-----ccCC--------CCceEEe-CCCCHHHHhhhhheeeecCCchhHHHHHHcCCCEEeeCCCCCcH
Confidence 99988754210 0112 2344455 99999 8999
Q ss_pred hhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 044731 357 VNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQ 429 (443)
Q Consensus 357 ~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~ 429 (443)
.||+++++. |+|+.+.. ..++.++|.++|++++.+ .++++++++++.+++ .+|. ..+.++++
T Consensus 338 ~~a~~~~~~-G~g~~l~~---~~~~~~~l~~al~~~l~~--~~~~~~~~~~~~~~~---~~g~--~~~~~~ie 399 (401)
T cd03784 338 FWAARVAEL-GAGPALDP---RELTAERLAAALRRLLDP--PSRRRAAALLRRIRE---EDGV--PSAADVIE 399 (401)
T ss_pred HHHHHHHHC-CCCCCCCc---ccCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHh---ccCH--HHHHHHHh
Confidence 999999887 99999985 568999999999999986 466777777777754 2443 34444444
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.93 E-value=3.5e-25 Score=218.53 Aligned_cols=352 Identities=17% Similarity=0.185 Sum_probs=206.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
+++|+++..|..||++|++.||++|.++||+|+|+++..+.+.+.+ .++.|..++.. + ........ ...
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~-----ag~~f~~~~~~--~-~~~~~~~~---~~~ 69 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEA-----AGLAFVAYPIR--D-SELATEDG---KFA 69 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHH-----hCcceeecccc--C-Chhhhhhh---hhh
Confidence 4789999999999999999999999999999999999988888877 56667655421 1 11111100 001
Q ss_pred ChHHHH---HHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCC
Q 044731 89 GNLPIM---SALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSL 165 (443)
Q Consensus 89 ~~~~~~---~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (443)
..+.+. .........+.+++.+. .+|+++-|...+.+ .++..+++|++......... ++..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~------- 133 (406)
T COG1819 70 GVKSFRRLLQQFKKLIRELLELLREL--EPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTP------LPAA------- 133 (406)
T ss_pred ccchhHHHhhhhhhhhHHHHHHHHhc--chhhhhcchhhhhh-hhhhhcccchhhhhhhhccC------Cccc-------
Confidence 112222 11223334444556666 79999999876656 67888899987665443211 1110
Q ss_pred CceecCCCC--CCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCch-------hhhHHHHHHH-H
Q 044731 166 DVVEFRDLP--RSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFD-------DLESEYLDYL-K 235 (443)
Q Consensus 166 ~~~~~p~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-------~l~~~~~~~~-~ 235 (443)
....|.+. ..+..+...++......... .... . .....++...-....+.+. .+...+.+.. .
T Consensus 134 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (406)
T COG1819 134 -GLPLPPVGIAGKLPIPLYPLPPRLVRPLIF--ARSW--L--PKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFP 206 (406)
T ss_pred -ccCcccccccccccccccccChhhcccccc--chhh--h--hhhhhhhhccccccccchHHHhcCCCCccccccccccC
Confidence 00000000 00001111111111100000 0000 0 0000000000000000000 0000000000 0
Q ss_pred --HhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceE
Q 044731 236 --RKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFL 313 (443)
Q Consensus 236 --~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~l 313 (443)
..+| -....+||+..... .+...|.. .++++||+||||+.+. .+.+..++++|..++.+||
T Consensus 207 ~~~~~p-~~~~~~~~~~~~~~-------------~~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi 269 (406)
T COG1819 207 PGDRLP-FIGPYIGPLLGEAA-------------NELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVI 269 (406)
T ss_pred CCCCCC-CCcCcccccccccc-------------ccCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEE
Confidence 0112 22334444443221 23334433 4567999999999876 8888999999999999999
Q ss_pred EEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccchhh
Q 044731 314 WVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQFVN 358 (443)
Q Consensus 314 w~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~~n 358 (443)
....... .....+|.| .++. +|+|| .||+.|
T Consensus 270 ~~~~~~~-----~~~~~~p~n--------~~v~-~~~p~~~~l~~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~n 335 (406)
T COG1819 270 VSLGGAR-----DTLVNVPDN--------VIVA-DYVPQLELLPRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLN 335 (406)
T ss_pred Eeccccc-----cccccCCCc--------eEEe-cCCCHHHHhhhcCEEEecCCcchHHHHHHcCCCEEEecCCcchhHH
Confidence 9876521 122445554 4466 99999 999999
Q ss_pred HHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 044731 359 ARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLR 435 (443)
Q Consensus 359 a~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~ 435 (443)
|.++++. |+|+.+.. +.+|++.++++|++||.+ +.||+++.++++.++.+ +| .+.+.+.++.....+
T Consensus 336 A~rve~~-G~G~~l~~---~~l~~~~l~~av~~vL~~-~~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~~~ 402 (406)
T COG1819 336 AERVEEL-GAGIALPF---EELTEERLRAAVNEVLAD-DSYRRAAERLAEEFKEE---DG--PAKAADLLEEFAREK 402 (406)
T ss_pred HHHHHHc-CCceecCc---ccCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHhcc
Confidence 9999988 99999996 899999999999999999 79999999999999963 55 456777777655443
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.39 E-value=1.4e-10 Score=113.33 Aligned_cols=298 Identities=12% Similarity=0.060 Sum_probs=159.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCCh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGN 90 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 90 (443)
+|++..-++-||+.|-+++|++|.++||+|.|+++....+. ...+ ..++.+..++.. ++. .. ..+
T Consensus 3 ~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~--~l~~-~~g~~~~~~~~~---~l~----~~-----~~~ 67 (352)
T PRK12446 3 KIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEK--TIIE-KENIPYYSISSG---KLR----RY-----FDL 67 (352)
T ss_pred eEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcccc--ccCc-ccCCcEEEEecc---CcC----CC-----chH
Confidence 68888889999999999999999999999999997653211 1111 245666655411 111 00 011
Q ss_pred HHHHHHHhhhh--HHHHHHHHhCCCCCcEEEeCCCcch--HHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCCC
Q 044731 91 LPIMSALGKLY--DPIIQWFHSHANPPVAILSDFFLGW--TLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSLD 166 (443)
Q Consensus 91 ~~~~~~~~~~~--~~~~~ll~~~~~~~D~vI~D~~~~~--~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (443)
+.+........ -....++++. +||+||....+.. +..+|..+++|.+..-...
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~--kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~--------------------- 124 (352)
T PRK12446 68 KNIKDPFLVMKGVMDAYVRIRKL--KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDM--------------------- 124 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCEEEecCchhhHHHHHHHHHcCCCEEEECCCC---------------------
Confidence 12211111111 1223457777 9999999875553 3567788899987653321
Q ss_pred ceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHhcCCCceeee
Q 044731 167 VVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFGV 246 (443)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~v 246 (443)
+|++. .+.+ .+.++ .++-+|++.. ..++..+++.+
T Consensus 125 ---~~g~~-------------------------nr~~------~~~a~---~v~~~f~~~~--------~~~~~~k~~~t 159 (352)
T PRK12446 125 ---TPGLA-------------------------NKIA------LRFAS---KIFVTFEEAA--------KHLPKEKVIYT 159 (352)
T ss_pred ---CccHH-------------------------HHHH------HHhhC---EEEEEccchh--------hhCCCCCeEEE
Confidence 01111 0111 01111 2233332211 11110367888
Q ss_pred ccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHH-HHHHHHHHHHhCCCceEEEEeCCccccCC
Q 044731 247 GPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKE-QMEALALGLEKSGIRFLWVVKTSVIHAEG 325 (443)
Q Consensus 247 Gpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~-~~~~i~~al~~~~~~~lw~~~~~~~~~~~ 325 (443)
|+-+...-. .... +....-+.-.+++++|+|.-||.....-. .+.+++..+.. +.+++|..+.+..+...
T Consensus 160 G~Pvr~~~~-------~~~~-~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~~~~~~ 230 (352)
T PRK12446 160 GSPVREEVL-------KGNR-EKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGNLDDSL 230 (352)
T ss_pred CCcCCcccc-------cccc-hHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCchHHHHH
Confidence 865543211 0000 11111122223466999999998754443 23444444432 46788877754211000
Q ss_pred ---CCCCCCc---hhHHHHh---------------------hcCceEeecCCCc---ccchhhHHHHHhhcceeEEeecC
Q 044731 326 ---NGYGLIP---YGFEERV---------------------AGRGLVLKGWVPQ---ADQFVNARLLVDDLRVAVLVCEG 375 (443)
Q Consensus 326 ---~~~~~lp---~~~~~~~---------------------~~~~~vv~~W~PQ---~DQ~~na~~v~~~~g~G~~l~~~ 375 (443)
.....+| ++...-+ +--.+++ +|.+. +||..||+.+++. |+|..+..
T Consensus 231 ~~~~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~i-P~~~~~~~~~Q~~Na~~l~~~-g~~~~l~~- 307 (352)
T PRK12446 231 QNKEGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLI-PLSKFASRGDQILNAESFERQ-GYASVLYE- 307 (352)
T ss_pred hhcCCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEE-cCCCCCCCchHHHHHHHHHHC-CCEEEcch-
Confidence 0000000 1111110 1112233 44332 5899999999988 99999874
Q ss_pred CCCCCCHHHHHHHHHHHhcCchHHHHHHHH
Q 044731 376 GDSVPDSDELGKVIGESLSQCGETKIKARE 405 (443)
Q Consensus 376 ~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~ 405 (443)
..++.+.|.++|.+++.|.+.|++++++
T Consensus 308 --~~~~~~~l~~~l~~ll~~~~~~~~~~~~ 335 (352)
T PRK12446 308 --EDVTVNSLIKHVEELSHNNEKYKTALKK 335 (352)
T ss_pred --hcCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 7899999999999999872255554433
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.36 E-value=1.8e-10 Score=111.23 Aligned_cols=117 Identities=19% Similarity=0.252 Sum_probs=71.7
Q ss_pred cEEEEEcCC-CCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 10 THVLIFPYP-AQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 10 ~~ili~~~~-~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
|||++...+ +.||+.-.+.|+++| |||+|++++.....+.+.. .+....++. +....... .+ +
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~------~~~~~~~~~-----~~~~~~~~-~~--~ 64 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKP------RFPVREIPG-----LGPIQENG-RL--D 64 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcc------ccCEEEccC-----ceEeccCC-cc--c
Confidence 578886654 899999999999999 6999999998754433322 234443321 11100000 00 1
Q ss_pred ChHHHHH------HHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechh
Q 044731 89 GNLPIMS------ALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSG 145 (443)
Q Consensus 89 ~~~~~~~------~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 145 (443)
....+.. ........+.+++++. +||+||+|.. +.+..+|+..|+|++.+....
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~pDlVIsD~~-~~~~~aa~~~giP~i~i~~~~ 124 (318)
T PF13528_consen 65 RWKTVRNNIRWLARLARRIRREIRWLREF--RPDLVISDFY-PLAALAARRAGIPVIVISNQY 124 (318)
T ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEcCh-HHHHHHHHhcCCCEEEEEehH
Confidence 1111111 1122333445566777 8999999954 445678899999998886654
No 30
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.22 E-value=1e-11 Score=104.65 Aligned_cols=126 Identities=16% Similarity=0.193 Sum_probs=78.5
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChH
Q 044731 12 VLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNL 91 (443)
Q Consensus 12 ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 91 (443)
|+|++.++.||++|++.||++|.+|||+|++++++.+.+.+.. .|++|++++.+ ..+.......... ....
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~-----~Gl~~~~~~~~--~~~~~~~~~~~~~--~~~~ 71 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEA-----AGLEFVPIPGD--SRLPRSLEPLANL--RRLA 71 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHH-----TT-EEEESSSC--GGGGHHHHHHHHH--HCHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceecccc-----cCceEEEecCC--cCcCcccchhhhh--hhHH
Confidence 7899999999999999999999999999999999888887766 79999987631 0000000000000 0000
Q ss_pred HHHHHHhhhhHHHHHHHHhC----C--CCCcEEEeCCCcchHHHHHHHhCCCceeEechhH
Q 044731 92 PIMSALGKLYDPIIQWFHSH----A--NPPVAILSDFFLGWTLNLARELNIVRITFFSSGS 146 (443)
Q Consensus 92 ~~~~~~~~~~~~~~~ll~~~----~--~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~ 146 (443)
..........+.+.+...+. . ...|+++.+.....+..+|+++|||++.....+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~ 132 (139)
T PF03033_consen 72 RLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPW 132 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGG
T ss_pred HHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCc
Confidence 11111122222222222211 1 1567888888777788999999999998877654
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.11 E-value=9.7e-09 Score=99.30 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=67.2
Q ss_pred EEEEEcC-CCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCee-EEEeCCCCCCCCCCCcccccccCCC
Q 044731 11 HVLIFPY-PAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQ-TLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 11 ~ili~~~-~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
||++... .+.||+.|.++++++|.+ ||+|+++++......+.. .++. +...| +..-... .. ..+
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~-----~~~~~~~~~p-----~~~~~~~--~~-~~~ 66 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISK-----YGFKVFETFP-----GIKLKGE--DG-KVN 66 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhh-----hcCcceeccC-----CceEeec--CC-cCc
Confidence 4666554 566999999999999999 999999987663323322 2232 22111 0100000 00 001
Q ss_pred ChHHHHH--HH-hhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEec
Q 044731 89 GNLPIMS--AL-GKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFS 143 (443)
Q Consensus 89 ~~~~~~~--~~-~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~ 143 (443)
....+.. .+ ........+++++. +||+||+| +.+.+..+|..+|||.+.+.-
T Consensus 67 ~~~~l~~~~~~~~~~~~~~~~~l~~~--~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~ 121 (321)
T TIGR00661 67 IVKTLRNKEYSPKKAIRREINIIREY--NPDLIISD-FEYSTVVAAKLLKIPVICISN 121 (321)
T ss_pred HHHHHHhhccccHHHHHHHHHHHHhc--CCCEEEEC-CchHHHHHHHhcCCCEEEEec
Confidence 1111110 01 11222334567777 89999999 445557789999999997754
No 32
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.94 E-value=4.5e-07 Score=88.02 Aligned_cols=114 Identities=15% Similarity=0.080 Sum_probs=70.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCc-eEEEEeCCCCchh-hhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNL-DITILITPKNLPI-VSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh-~Vt~~t~~~~~~~-v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
.|++...++-||+.|-++|+++|.++|+ +|.++.+....+. +.. ..++.++.++.. ..... .
T Consensus 2 ~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~----~~~~~~~~I~~~----~~~~~--------~ 65 (357)
T COG0707 2 KIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVK----QYGIEFELIPSG----GLRRK--------G 65 (357)
T ss_pred eEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeecc----ccCceEEEEecc----ccccc--------C
Confidence 5778888899999999999999999999 5777755443222 211 246667666531 11110 0
Q ss_pred ChHHHHHHHh--hhhHHHHHHHHhCCCCCcEEEeCCCcch--HHHHHHHhCCCceeEe
Q 044731 89 GNLPIMSALG--KLYDPIIQWFHSHANPPVAILSDFFLGW--TLNLARELNIVRITFF 142 (443)
Q Consensus 89 ~~~~~~~~~~--~~~~~~~~ll~~~~~~~D~vI~D~~~~~--~~~vA~~lgiP~i~~~ 142 (443)
....+...+. .......+++++. +||+||.=..+.. +...|..+|+|.+..-
T Consensus 66 ~~~~~~~~~~~~~~~~~a~~il~~~--kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihE 121 (357)
T COG0707 66 SLKLLKAPFKLLKGVLQARKILKKL--KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHE 121 (357)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEecCCccccHHHHHHHhCCCCEEEEe
Confidence 1111111111 1233455678888 9999999765554 3456677899987663
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.87 E-value=2.4e-06 Score=83.87 Aligned_cols=114 Identities=16% Similarity=0.129 Sum_probs=68.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRG 89 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 89 (443)
++|+|+..+.-||...+..|+++|.++||+|++++....... .... ..+++++.++.+ .... . ..
T Consensus 2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~--~~~~-~~g~~~~~~~~~---~~~~-~--------~~ 66 (357)
T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEA--RLVP-KAGIEFHFIPSG---GLRR-K--------GS 66 (357)
T ss_pred cEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhh--hccc-cCCCcEEEEecc---CcCC-C--------Ch
Confidence 689999888889999999999999999999999987542111 1111 135666655421 1110 0 01
Q ss_pred hHHHHHHH--hhhhHHHHHHHHhCCCCCcEEEeCCCc-ch-HHHHHHHhCCCcee
Q 044731 90 NLPIMSAL--GKLYDPIIQWFHSHANPPVAILSDFFL-GW-TLNLARELNIVRIT 140 (443)
Q Consensus 90 ~~~~~~~~--~~~~~~~~~ll~~~~~~~D~vI~D~~~-~~-~~~vA~~lgiP~i~ 140 (443)
...+.... ......+.+++++. +||+|++.... .+ +..++...++|+|.
T Consensus 67 ~~~l~~~~~~~~~~~~~~~~ik~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~ 119 (357)
T PRK00726 67 LANLKAPFKLLKGVLQARKILKRF--KPDVVVGFGGYVSGPGGLAARLLGIPLVI 119 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECCCcchhHHHHHHHHcCCCEEE
Confidence 11111111 12223445667777 89999999633 33 33456667888774
No 34
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.78 E-value=6.7e-07 Score=88.63 Aligned_cols=71 Identities=11% Similarity=0.143 Sum_probs=59.4
Q ss_pred cchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCch----HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 044731 354 DQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCG----ETKIKARELRDKALAAVKSGGSSTRDLETLVQ 429 (443)
Q Consensus 354 DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~----~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~ 429 (443)
+|..|+..++++ ++...+.. +.+|++.|.+.+.+++.| + .++++..+--..+++-.+++|+|.+..+.+++
T Consensus 310 ~~~~~~nil~~~-~~~pel~q---~~~~~~~l~~~~~~ll~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 310 DYISLPNILANR-LLVPELLQ---EECTPHPLAIALLLLLEN-GLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVLE 384 (385)
T ss_pred CeeeccHHhcCC-ccchhhcC---CCCCHHHHHHHHHHHhcC-CcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhh
Confidence 489999999988 88888763 789999999999999999 8 78887777777777777788888888776654
No 35
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.63 E-value=1.3e-05 Score=78.26 Aligned_cols=113 Identities=17% Similarity=0.128 Sum_probs=68.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCCh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGN 90 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 90 (443)
+|++.....-||......|++.|.++||+|++++...... .. ... ..++++..++... ... . ...
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~-~~-~~~-~~~~~~~~~~~~~---~~~-~--------~~~ 65 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLE-AR-LVP-KAGIPLHTIPVGG---LRR-K--------GSL 65 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcch-hh-ccc-ccCCceEEEEecC---cCC-C--------ChH
Confidence 5888888889999999999999999999999998753211 11 110 1345665554210 110 0 111
Q ss_pred HHHHHHH--hhhhHHHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCcee
Q 044731 91 LPIMSAL--GKLYDPIIQWFHSHANPPVAILSDFFLG--WTLNLARELNIVRIT 140 (443)
Q Consensus 91 ~~~~~~~--~~~~~~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~ 140 (443)
..+.... ......+.+++++. +||+|++..... .+..+|...|+|.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~i~~~--~pDvI~~~~~~~~~~~~~~a~~~~~p~v~ 117 (350)
T cd03785 66 KKLKAPFKLLKGVLQARKILKKF--KPDVVVGFGGYVSGPVGLAAKLLGIPLVI 117 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECCCCcchHHHHHHHHhCCCEEE
Confidence 1111111 12223455667777 899999875332 344567777999764
No 36
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.27 E-value=0.00028 Score=69.85 Aligned_cols=109 Identities=12% Similarity=0.002 Sum_probs=62.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRG 89 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 89 (443)
++|+|+.-+.-||+.|-. ++++|.++++++.++..... .++...- ...+.++.++ - . ..
T Consensus 2 ~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~l~--------~-----~----g~ 60 (380)
T PRK00025 2 LRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGP--RMQAAGC-ESLFDMEELA--------V-----M----GL 60 (380)
T ss_pred ceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccH--HHHhCCC-ccccCHHHhh--------h-----c----cH
Confidence 589999999999999999 99999998888888764321 2322100 0111111111 0 0 00
Q ss_pred hHHHHH--HHhhhhHHHHHHHHhCCCCCcEEEeCCC-cchH--HHHHHHhCCCceeE
Q 044731 90 NLPIMS--ALGKLYDPIIQWFHSHANPPVAILSDFF-LGWT--LNLARELNIVRITF 141 (443)
Q Consensus 90 ~~~~~~--~~~~~~~~~~~ll~~~~~~~D~vI~D~~-~~~~--~~vA~~lgiP~i~~ 141 (443)
.+.+.. ........+.+++++. +||+|+.-.. ..+. ...|..+|+|++.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~l~~~--kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~ 115 (380)
T PRK00025 61 VEVLPRLPRLLKIRRRLKRRLLAE--PPDVFIGIDAPDFNLRLEKKLRKAGIPTIHY 115 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeCCCCCCHHHHHHHHHCCCCEEEE
Confidence 111111 1122334566778888 8999876322 2233 33467789997754
No 37
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.22 E-value=0.0012 Score=64.38 Aligned_cols=114 Identities=18% Similarity=0.150 Sum_probs=68.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRG 89 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 89 (443)
++|+|++-+..||+.....|+++|.++||+|++++.+.... ..... ..+++++.++.. ... .. ..
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~--~~~~~-~~g~~~~~i~~~---~~~----~~-----~~ 65 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLE--KRLVP-KAGIEFYFIPVG---GLR----RK-----GS 65 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcch--hcccc-cCCCceEEEecc---CcC----CC-----Ch
Confidence 37999999999999977899999999999999998643211 01000 135666555421 000 00 11
Q ss_pred hHHHHHHH--hhhhHHHHHHHHhCCCCCcEEEeCCCcch--HHHHHHHhCCCcee
Q 044731 90 NLPIMSAL--GKLYDPIIQWFHSHANPPVAILSDFFLGW--TLNLARELNIVRIT 140 (443)
Q Consensus 90 ~~~~~~~~--~~~~~~~~~ll~~~~~~~D~vI~D~~~~~--~~~vA~~lgiP~i~ 140 (443)
.+.+.... ......+.+++++. +||+|++...... +..++..+++|.+.
T Consensus 66 ~~~l~~~~~~~~~~~~l~~~i~~~--~pDvVi~~~~~~~~~~~~~~~~~~~p~v~ 118 (348)
T TIGR01133 66 FRLIKTPLKLLKAVFQARRILKKF--KPDAVIGFGGYVSGPAGLAAKLLGIPLFH 118 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEcCCcccHHHHHHHHHcCCCEEE
Confidence 11111111 11223455667777 8999999854332 33456777999863
No 38
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.13 E-value=0.0013 Score=65.21 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=30.9
Q ss_pred CcEEEEEcCC-CCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 9 ATHVLIFPYP-AQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 9 ~~~ili~~~~-~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
.++|+|++.. +.||..+-.+|+++|.++||+|+++..
T Consensus 4 ~~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d 41 (380)
T PRK13609 4 NPKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCD 41 (380)
T ss_pred CCeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3478888865 569999999999999999999777654
No 39
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.93 E-value=0.023 Score=55.02 Aligned_cols=28 Identities=14% Similarity=0.285 Sum_probs=26.0
Q ss_pred CCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 20 QGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 20 ~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.|+.+.+..|+++|+++||+|+++++..
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~ 41 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGP 41 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCc
Confidence 6899999999999999999999999754
No 40
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.77 E-value=0.037 Score=56.43 Aligned_cols=41 Identities=17% Similarity=0.274 Sum_probs=31.5
Q ss_pred CCCcEEEEEcCCC-----CCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 7 SRATHVLIFPYPA-----QGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 7 ~~~~~ili~~~~~-----~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.+++||+++..++ -|=-+-+..|++.|.++||+|+++++..
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~ 101 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDE 101 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 4578999885332 2334677899999999999999999754
No 41
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=97.56 E-value=0.012 Score=58.50 Aligned_cols=67 Identities=10% Similarity=0.076 Sum_probs=45.4
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
+.|..|+..+.+. |+|+... +.+++.++|.+++.+ +..+ .++++..++. .+.-+..+-.+.+++.+.
T Consensus 304 gqe~~N~~~~~~~-G~g~~~~-------~~~~l~~~i~~ll~~-~~~~---~~m~~~~~~~-~~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 304 GQELENALYFEEK-GFGKIAD-------TPEEAIKIVASLTNG-NEQL---TNMISTMEQD-KIKYATQTICRDLLDLIG 370 (391)
T ss_pred CcchhHHHHHHhC-CcEEEeC-------CHHHHHHHHHHHhcC-HHHH---HHHHHHHHHh-cCCCCHHHHHHHHHHHhh
Confidence 4577899999888 9997654 789999999999988 5433 3455555543 334445555566655543
No 42
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.55 E-value=0.11 Score=51.66 Aligned_cols=112 Identities=16% Similarity=0.193 Sum_probs=63.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCCh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGN 90 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 90 (443)
|||++.-...|- +.+||++|+++||+|++++........ .+++.+.+.... .... ... ...
T Consensus 1 ~il~~~~~~p~~---~~~la~~L~~~G~~v~~~~~~~~~~~~-------~~v~~~~~~~~~---~~~~--~~~----~~~ 61 (396)
T cd03818 1 RILFVHQNFPGQ---FRHLAPALAAQGHEVVFLTEPNAAPPP-------GGVRVVRYRPPR---GPTS--GTH----PYL 61 (396)
T ss_pred CEEEECCCCchh---HHHHHHHHHHCCCEEEEEecCCCCCCC-------CCeeEEEecCCC---CCCC--CCC----ccc
Confidence 466766555543 678999999999999999975532110 136666554211 0010 000 122
Q ss_pred HHHHHHH---hhhhHHHHHHH-HhCCCCCcEEEeCCCcchHHHHHHHh-CCCceeEec
Q 044731 91 LPIMSAL---GKLYDPIIQWF-HSHANPPVAILSDFFLGWTLNLAREL-NIVRITFFS 143 (443)
Q Consensus 91 ~~~~~~~---~~~~~~~~~ll-~~~~~~~D~vI~D~~~~~~~~vA~~l-giP~i~~~~ 143 (443)
..+.... ..+...+..+. +.. +||+|++...+.++..+.+.+ ++|+|.+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~--~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~ 117 (396)
T cd03818 62 REFEEAVLRGQAVARALLALRAKGF--RPDVIVAHPGWGETLFLKDVWPDAPLIGYFE 117 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCC--CCCEEEECCccchhhhHHHhCCCCCEEEEEe
Confidence 2222222 22233333332 334 899999998777777777775 588887643
No 43
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.54 E-value=0.075 Score=53.30 Aligned_cols=120 Identities=14% Similarity=0.071 Sum_probs=63.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
.-+|++++....|+-.=+..+|+.|+++||+|++++............ ..++.++.++.. ...... .. .
T Consensus 3 ~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~--~~~v~~~~~~~~-----~~~~~~---~~-~ 71 (415)
T cd03816 3 RKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILS--NPNITIHPLPPP-----PQRLNK---LP-F 71 (415)
T ss_pred ccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhc--CCCEEEEECCCC-----cccccc---ch-H
Confidence 347777777777776667889999999999999998643221111011 256777766421 000000 00 0
Q ss_pred ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCC-Cc-c-h--HHHHHHHhCCCceeE
Q 044731 89 GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDF-FL-G-W--TLNLARELNIVRITF 141 (443)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~-~~-~-~--~~~vA~~lgiP~i~~ 141 (443)
....+..........+..++... +||+|++.. .. . . +..++...++|+|..
T Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~~--~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~ 127 (415)
T cd03816 72 LLFAPLKVLWQFFSLLWLLYKLR--PADYILIQNPPSIPTLLIAWLYCLLRRTKLIID 127 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEE
Confidence 01111111122233334445554 899998753 21 1 1 223455569997753
No 44
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.35 E-value=0.16 Score=48.86 Aligned_cols=109 Identities=12% Similarity=0.055 Sum_probs=57.8
Q ss_pred CCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhh
Q 044731 20 QGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGK 99 (443)
Q Consensus 20 ~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (443)
-|+-.-...|+++|+++||+|+++++.......... ........... ........ ..............
T Consensus 15 gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~ 83 (359)
T cd03823 15 GGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKE---VIGVVVYGRPI-----DEVLRSAL---PRDLFHLSDYDNPA 83 (359)
T ss_pred cchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccc---cccceeecccc-----ccccCCCc---hhhhhHHHhccCHH
Confidence 588888999999999999999999975532111100 01111111100 00000000 00000111111123
Q ss_pred hhHHHHHHHHhCCCCCcEEEeCCCcchH---HHHHHHhCCCceeE
Q 044731 100 LYDPIIQWFHSHANPPVAILSDFFLGWT---LNLARELNIVRITF 141 (443)
Q Consensus 100 ~~~~~~~ll~~~~~~~D~vI~D~~~~~~---~~vA~~lgiP~i~~ 141 (443)
+...+.+++++. ++|+|++....... ...+...++|++..
T Consensus 84 ~~~~~~~~~~~~--~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~ 126 (359)
T cd03823 84 VVAEFARLLEDF--RPDVVHFHHLQGLGVSILRAARDRGIPIVLT 126 (359)
T ss_pred HHHHHHHHHHHc--CCCEEEECCccchHHHHHHHHHhcCCCEEEE
Confidence 455667777777 89999888654332 24567788998764
No 45
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.33 E-value=0.18 Score=48.95 Aligned_cols=29 Identities=17% Similarity=0.342 Sum_probs=26.0
Q ss_pred CCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 20 QGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 20 ~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.|+..-...+++.|+++||+|++++....
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~ 42 (394)
T cd03794 14 GGGAFRTTELAEELVKRGHEVTVITGSPN 42 (394)
T ss_pred CCcceeHHHHHHHHHhCCceEEEEecCCC
Confidence 48999999999999999999999987543
No 46
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.27 E-value=0.23 Score=49.00 Aligned_cols=108 Identities=16% Similarity=0.223 Sum_probs=56.5
Q ss_pred CCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhh
Q 044731 20 QGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGK 99 (443)
Q Consensus 20 ~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (443)
-|+-..+..|+++|+++||+|+++++.......... ....++.+..++... ....... .....+..
T Consensus 21 GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~----~~~~~~~~---- 86 (398)
T cd03800 21 GGQNVYVLELARALARLGHEVDIFTRRIDDALPPIV-ELAPGVRVVRVPAGP-----AEYLPKE----ELWPYLDE---- 86 (398)
T ss_pred CceeehHHHHHHHHhccCceEEEEEecCCcccCCcc-ccccceEEEeccccc-----ccCCChh----hcchhHHH----
Confidence 478889999999999999999999864432111100 002456665554211 0000000 01111111
Q ss_pred hhHHHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCceeE
Q 044731 100 LYDPIIQWFHSHANPPVAILSDFFLG--WTLNLARELNIVRITF 141 (443)
Q Consensus 100 ~~~~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~ 141 (443)
....+...+.....+||+|++..... .+..++..+|+|+|..
T Consensus 87 ~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~ 130 (398)
T cd03800 87 FADDLLRFLRREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHT 130 (398)
T ss_pred HHHHHHHHHHhcCCCccEEEEecCccchHHHHHHhhcCCceEEE
Confidence 11112222222212799999875333 2446778889997754
No 47
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.20 E-value=0.24 Score=47.82 Aligned_cols=30 Identities=10% Similarity=0.227 Sum_probs=26.7
Q ss_pred CCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 18 PAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 18 ~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
...|+..-...+++.|+++||+|+++++..
T Consensus 12 ~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~ 41 (374)
T cd03817 12 QVNGVATSIRRLAEELEKRGHEVYVVAPSY 41 (374)
T ss_pred CCCCeehHHHHHHHHHHHcCCeEEEEeCCC
Confidence 456899999999999999999999998754
No 48
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.85 E-value=0.45 Score=45.38 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=64.8
Q ss_pred CcEEEEEcC--CCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccc
Q 044731 9 ATHVLIFPY--PAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKE 84 (443)
Q Consensus 9 ~~~ili~~~--~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 84 (443)
.+||++..- .+-||..=++.+|++|.+. |.+|++++.......+.- ..+++++.+|.-. ....|.....+
T Consensus 9 ~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~----~~gVd~V~LPsl~--k~~~G~~~~~d 82 (400)
T COG4671 9 RPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPG----PAGVDFVKLPSLI--KGDNGEYGLVD 82 (400)
T ss_pred cceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCC----cccCceEecCceE--ecCCCceeeee
Confidence 458999885 6789999999999999996 999999998665433332 2678999887310 01111111111
Q ss_pred cCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCC
Q 044731 85 LGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFF 123 (443)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~ 123 (443)
.. .. ...........+....++. +||++|.|.+
T Consensus 83 ~~-~~---l~e~~~~Rs~lil~t~~~f--kPDi~IVd~~ 115 (400)
T COG4671 83 LD-GD---LEETKKLRSQLILSTAETF--KPDIFIVDKF 115 (400)
T ss_pred cC-CC---HHHHHHHHHHHHHHHHHhc--CCCEEEEecc
Confidence 11 11 2222222334445556677 9999999965
No 49
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=96.47 E-value=0.85 Score=43.49 Aligned_cols=100 Identities=14% Similarity=-0.007 Sum_probs=56.1
Q ss_pred CCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhh
Q 044731 20 QGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGK 99 (443)
Q Consensus 20 ~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (443)
.|+..-+..|++.|.+.||+|++++......... ....... .... ... ... ........
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~---------~~~~~~~-----~~~~--~~~----~~~-~~~~~~~~ 72 (374)
T cd03801 14 GGAERHVLELARALAARGHEVTVLTPGDGGLPDE---------EEVGGIV-----VVRP--PPL----LRV-RRLLLLLL 72 (374)
T ss_pred CcHhHHHHHHHHHHHhcCceEEEEecCCCCCCce---------eeecCcc-----eecC--Ccc----ccc-chhHHHHH
Confidence 6899999999999999999999999754321110 0000000 0000 000 000 00111112
Q ss_pred hhHHHHHHHHhCCCCCcEEEeCCCcchHH--HHHHHhCCCceeEe
Q 044731 100 LYDPIIQWFHSHANPPVAILSDFFLGWTL--NLARELNIVRITFF 142 (443)
Q Consensus 100 ~~~~~~~ll~~~~~~~D~vI~D~~~~~~~--~vA~~lgiP~i~~~ 142 (443)
....+..+++.. ++|+|+......... .++...++|++...
T Consensus 73 ~~~~~~~~~~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~ 115 (374)
T cd03801 73 LALRLRRLLRRE--RFDVVHAHDWLALLAAALAARLLGIPLVLTV 115 (374)
T ss_pred HHHHHHHHhhhc--CCcEEEEechhHHHHHHHHHHhcCCcEEEEe
Confidence 223445566666 899999987655443 46777899977553
No 50
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=96.30 E-value=1.4 Score=44.20 Aligned_cols=97 Identities=14% Similarity=0.217 Sum_probs=59.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCce--E--EEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLD--I--TILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELG 86 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~--V--t~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 86 (443)
+++-+...+-|.+.-...|+++|.+++++ | |+.|+. ..+...... ..++.+..+|.+ .+
T Consensus 51 ~~iW~Ha~s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~-~~~~~~~~~--~~~~~~~~~P~d----~~---------- 113 (425)
T PRK05749 51 PLIWFHAVSVGETRAAIPLIRALRKRYPDLPILVTTMTPT-GSERAQALF--GDDVEHRYLPYD----LP---------- 113 (425)
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHHHhCCCCcEEEeCCCcc-HHHHHHHhc--CCCceEEEecCC----cH----------
Confidence 45667888889999999999999998765 3 322221 122222211 124444444421 00
Q ss_pred CCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcch--HHHHHHHhCCCceeE
Q 044731 87 NRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGW--TLNLARELNIVRITF 141 (443)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~--~~~vA~~lgiP~i~~ 141 (443)
..+.++++++ +||+++......| .+..+...|+|.+.+
T Consensus 114 ---------------~~~~~~l~~~--~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~ 153 (425)
T PRK05749 114 ---------------GAVRRFLRFW--RPKLVIIMETELWPNLIAELKRRGIPLVLA 153 (425)
T ss_pred ---------------HHHHHHHHhh--CCCEEEEEecchhHHHHHHHHHCCCCEEEE
Confidence 2455678888 9999986533333 345667889998865
No 51
>PRK10307 putative glycosyl transferase; Provisional
Probab=96.12 E-value=1.7 Score=43.37 Aligned_cols=38 Identities=11% Similarity=0.253 Sum_probs=26.7
Q ss_pred cEEEEEcC---CCCC-ChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPY---PAQG-HMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~---~~~g-H~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|+|++++. |-.| =-.-+..|+++|.++||+|+++++..
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~ 42 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPP 42 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCC
Confidence 46777763 2212 11235799999999999999999753
No 52
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=95.96 E-value=1.5 Score=41.47 Aligned_cols=30 Identities=30% Similarity=0.333 Sum_probs=25.3
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.-|...-+..++++|+++||+|++++....
T Consensus 12 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 41 (348)
T cd03820 12 AGGAERVLSNLANALAEKGHEVTIISLDKG 41 (348)
T ss_pred CCChHHHHHHHHHHHHhCCCeEEEEecCCC
Confidence 456667888999999999999999997554
No 53
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=95.90 E-value=1.8 Score=41.83 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=30.7
Q ss_pred cEEEEEcCC-C-CCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 10 THVLIFPYP-A-QGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 10 ~~ili~~~~-~-~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
|+|+++... . .|+-.-...++++|.++||+|++++..
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~ 39 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQE 39 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEee
Confidence 467777643 3 688999999999999999999999853
No 54
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=95.80 E-value=0.097 Score=49.44 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=59.1
Q ss_pred CCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHH
Q 044731 18 PAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSAL 97 (443)
Q Consensus 18 ~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (443)
-+.||+.=++.||++|.++||+|+|++............ ..++.+..++.. . ..
T Consensus 12 iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~--~~g~~v~~~~~~-----~-~~------------------ 65 (279)
T TIGR03590 12 IGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLL--SAGFPVYELPDE-----S-SR------------------ 65 (279)
T ss_pred ccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHH--HcCCeEEEecCC-----C-ch------------------
Confidence 367999999999999999999999999765432222211 156676665421 0 00
Q ss_pred hhhhHHHHHHHHhCCCCCcEEEeCCCcchH-H-HHHHHhCCCceeE
Q 044731 98 GKLYDPIIQWFHSHANPPVAILSDFFLGWT-L-NLARELNIVRITF 141 (443)
Q Consensus 98 ~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~-~-~vA~~lgiP~i~~ 141 (443)
..-...+.+++++. ++|++|+|.+.... + ......+.+.+.+
T Consensus 66 ~~d~~~~~~~l~~~--~~d~vV~D~y~~~~~~~~~~k~~~~~l~~i 109 (279)
T TIGR03590 66 YDDALELINLLEEE--KFDILIVDHYGLDADWEKLIKEFGRKILVI 109 (279)
T ss_pred hhhHHHHHHHHHhc--CCCEEEEcCCCCCHHHHHHHHHhCCeEEEE
Confidence 01112355667776 89999999865433 2 2233345554544
No 55
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=95.77 E-value=2.3 Score=42.07 Aligned_cols=46 Identities=15% Similarity=0.252 Sum_probs=32.6
Q ss_pred hhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 044731 356 FVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALA 412 (443)
Q Consensus 356 ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~ 412 (443)
-.|+..+.+. |.|+.+. +.+++.++|.+++.+ + .++.+++++..++
T Consensus 316 ~gn~~~i~~~-g~g~~~~-------~~~~la~~i~~ll~~-~--~~~~~~m~~~~~~ 361 (382)
T PLN02605 316 EGNVPYVVDN-GFGAFSE-------SPKEIARIVAEWFGD-K--SDELEAMSENALK 361 (382)
T ss_pred hhhHHHHHhC-CceeecC-------CHHHHHHHHHHHHcC-C--HHHHHHHHHHHHH
Confidence 4799888877 8887542 789999999999987 2 2233445555554
No 56
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=95.75 E-value=2.4 Score=42.12 Aligned_cols=100 Identities=10% Similarity=0.111 Sum_probs=54.8
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhh
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKL 100 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (443)
|--.-...|++.|+++||+|+++++........... ..++.+..+|... .... .. .. .+.. .
T Consensus 15 G~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~--~~~i~v~~~p~~~---~~~~----~~----~~-~~~~----~ 76 (398)
T cd03796 15 GVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYL--TNGLKVYYLPFVV---FYNQ----ST----LP-TFFG----T 76 (398)
T ss_pred cHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccc--cCceeEEEeccee---ccCC----cc----cc-chhh----h
Confidence 445778999999999999999999743211100001 1456665554210 0000 00 00 1111 1
Q ss_pred hHHHHHHHHhCCCCCcEEEeCCCcc-h---HHHHHHHhCCCcee
Q 044731 101 YDPIIQWFHSHANPPVAILSDFFLG-W---TLNLARELNIVRIT 140 (443)
Q Consensus 101 ~~~~~~ll~~~~~~~D~vI~D~~~~-~---~~~vA~~lgiP~i~ 140 (443)
...+.+++.+. +||+|-+..... . +..++..+++|.|.
T Consensus 77 ~~~l~~~~~~~--~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~ 118 (398)
T cd03796 77 FPLLRNILIRE--RITIVHGHQAFSALAHEALLHARTMGLKTVF 118 (398)
T ss_pred HHHHHHHHHhc--CCCEEEECCCCchHHHHHHHHhhhcCCcEEE
Confidence 12344556666 899997775332 2 34557778999765
No 57
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.74 E-value=0.16 Score=49.04 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=65.5
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhh
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKL 100 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (443)
-|+.-|.++.++|.++||+|.+.+-+.. ....+.. ..++.+..+.. .+ . .....+..... .
T Consensus 11 ~hvhfFk~~I~eL~~~GheV~it~R~~~--~~~~LL~-~yg~~y~~iG~-------~g-~-------~~~~Kl~~~~~-R 71 (335)
T PF04007_consen 11 AHVHFFKNIIRELEKRGHEVLITARDKD--ETEELLD-LYGIDYIVIGK-------HG-D-------SLYGKLLESIE-R 71 (335)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEEEeccc--hHHHHHH-HcCCCeEEEcC-------CC-C-------CHHHHHHHHHH-H
Confidence 3999999999999999999998775432 2222211 25677776641 00 0 11122222222 2
Q ss_pred hHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhH
Q 044731 101 YDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGS 146 (443)
Q Consensus 101 ~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~ 146 (443)
.-.+.+++++. +||++|+-. ...+..+|.-+|+|.|.|.=...
T Consensus 72 ~~~l~~~~~~~--~pDv~is~~-s~~a~~va~~lgiP~I~f~D~e~ 114 (335)
T PF04007_consen 72 QYKLLKLIKKF--KPDVAISFG-SPEAARVAFGLGIPSIVFNDTEH 114 (335)
T ss_pred HHHHHHHHHhh--CCCEEEecC-cHHHHHHHHHhCCCeEEEecCch
Confidence 23344555666 899999753 35667799999999999977653
No 58
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=95.66 E-value=2.6 Score=41.93 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=39.0
Q ss_pred ccchhhHHHHHhh---cceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 044731 353 ADQFVNARLLVDD---LRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLV 428 (443)
Q Consensus 353 ~DQ~~na~~v~~~---~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~ 428 (443)
..|. |+...++. .|-++.+. ..+.+.|.+++.+++.| +..+++..+ ..+..+++++++.+-.+.+.
T Consensus 325 ~~q~-na~~~~~~~~l~g~~~~l~-----~~~~~~l~~~l~~ll~d-~~~~~~~~~---~~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 325 GPQF-TYGFAEAQSRLLGGSVFLA-----SKNPEQAAQVVRQLLAD-PELLERCRR---NGQERMGPPGASARIAESIL 393 (396)
T ss_pred CCHH-HHHHHHhhHhhcCCEEecC-----CCCHHHHHHHHHHHHcC-HHHHHHHHH---HHHHhcCCCCHHHHHHHHHH
Confidence 4565 88766542 14445554 24459999999999998 666654442 22322355676655554443
No 59
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=95.61 E-value=0.16 Score=42.10 Aligned_cols=100 Identities=13% Similarity=0.171 Sum_probs=61.3
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChH
Q 044731 12 VLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNL 91 (443)
Q Consensus 12 ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 91 (443)
|+++......| ...+++.|.++||+|++++.......... ..++.+..++.. . . ...
T Consensus 2 Il~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~----~~~i~~~~~~~~--------~------k-~~~- 58 (139)
T PF13477_consen 2 ILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEI----IEGIKVIRLPSP--------R------K-SPL- 58 (139)
T ss_pred EEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhH----hCCeEEEEecCC--------C------C-ccH-
Confidence 56666655555 56889999999999999998544322221 257777766421 0 0 001
Q ss_pred HHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchH---HHHHHHhC-CCceeE
Q 044731 92 PIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWT---LNLARELN-IVRITF 141 (443)
Q Consensus 92 ~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~---~~vA~~lg-iP~i~~ 141 (443)
.+. . .. .+.+++++. +||+|.+......+ ..++...| +|+|..
T Consensus 59 ~~~---~-~~-~l~k~ik~~--~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 59 NYI---K-YF-RLRKIIKKE--KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred HHH---H-HH-HHHHHhccC--CCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 111 1 22 567778887 89999888765532 23456677 887743
No 60
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=95.59 E-value=2.2 Score=40.58 Aligned_cols=106 Identities=9% Similarity=0.098 Sum_probs=62.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchh-hhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPI-VSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRG 89 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~-v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 89 (443)
+|++++....|+...+..++++|.++||+|++++....... .. ..++++..++... . .. ..
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-----~---~~-----~~ 62 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELE-----ALGVKVIPIPLDR-----R---GI-----NP 62 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccc-----cCCceEEeccccc-----c---cc-----Ch
Confidence 36677666788999999999999999999999997654321 11 1456666554210 0 00 00
Q ss_pred hHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchH--HHHHHHhCCCceeE
Q 044731 90 NLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWT--LNLARELNIVRITF 141 (443)
Q Consensus 90 ~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~--~~vA~~lgiP~i~~ 141 (443)
...+. ....+..++++. ++|+|++....... ..++...+.|.+..
T Consensus 63 ~~~~~-----~~~~~~~~~~~~--~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 109 (359)
T cd03808 63 FKDLK-----ALLRLYRLLRKE--RPDIVHTHTPKPGILGRLAARLAGVPKVIY 109 (359)
T ss_pred HhHHH-----HHHHHHHHHHhc--CCCEEEEccccchhHHHHHHHHcCCCCEEE
Confidence 11111 112344556666 89999888654432 23344356665544
No 61
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=95.36 E-value=0.054 Score=45.52 Aligned_cols=94 Identities=13% Similarity=0.152 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhhhHHH
Q 044731 25 PLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKLYDPI 104 (443)
Q Consensus 25 P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (443)
-+..|+++|+++||+|+++++........ .. ..++++..++.+.. . ..... .. ....+
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~--~~~~~~~~~~~~~~---~---~~~~~-----~~--------~~~~~ 63 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDPEDDE-EE--EDGVRVHRLPLPRR---P---WPLRL-----LR--------FLRRL 63 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---GGG-S-EE--ETTEEEEEE--S-S---S---SGGGH-----CC--------HHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCcccc-cc--cCCceEEeccCCcc---c---hhhhh-----HH--------HHHHH
Confidence 46789999999999999999755433211 11 25677777763210 0 00000 00 11233
Q ss_pred HHHH--HhCCCCCcEEEeCCCcc-hHHHHHH-HhCCCceeEe
Q 044731 105 IQWF--HSHANPPVAILSDFFLG-WTLNLAR-ELNIVRITFF 142 (443)
Q Consensus 105 ~~ll--~~~~~~~D~vI~D~~~~-~~~~vA~-~lgiP~i~~~ 142 (443)
.+++ ++. +||+|.+..... ....++. ..++|+|...
T Consensus 64 ~~~l~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 103 (160)
T PF13579_consen 64 RRLLAARRE--RPDVVHAHSPTAGLVAALARRRRGIPLVVTV 103 (160)
T ss_dssp HHHCHHCT-----SEEEEEHHHHHHHHHHHHHHHT--EEEE-
T ss_pred HHHHhhhcc--CCeEEEecccchhHHHHHHHHccCCcEEEEE
Confidence 4444 444 899998886432 2234555 7899987653
No 62
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.08 E-value=3.6 Score=39.99 Aligned_cols=38 Identities=16% Similarity=0.315 Sum_probs=30.4
Q ss_pred cEEEEEcCC-CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYP-AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~-~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
++|+++++| .-|.-.-...|++.|++.||+|++++...
T Consensus 1 mki~~~~~p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~ 39 (371)
T cd04962 1 MKIGIVCYPTYGGSGVVATELGKALARRGHEVHFITSSR 39 (371)
T ss_pred CceeEEEEeCCCCccchHHHHHHHHHhcCCceEEEecCC
Confidence 356666664 45777889999999999999999998753
No 63
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=94.87 E-value=4.4 Score=39.94 Aligned_cols=99 Identities=16% Similarity=0.262 Sum_probs=69.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEe-CCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILI-TPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t-~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
..+-+...+.|-++-.++|.++|.++ ++.+++-| |+.-.+.+..... ..+....+|++ .+
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~--~~v~h~YlP~D----~~----------- 112 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFG--DSVIHQYLPLD----LP----------- 112 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcC--CCeEEEecCcC----ch-----------
Confidence 47778888999999999999999998 88888766 3333444444332 44666666642 11
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEE-EeCC-CcchHHHHHHHhCCCceeEe
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAI-LSDF-FLGWTLNLARELNIVRITFF 142 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~v-I~D~-~~~~~~~vA~~lgiP~i~~~ 142 (443)
..+.++++.+ +||++ |++. .+++...-+++.|+|.+.+.
T Consensus 113 --------------~~v~rFl~~~--~P~l~Ii~EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 113 --------------IAVRRFLRKW--RPKLLIIMETELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred --------------HHHHHHHHhc--CCCEEEEEeccccHHHHHHHHHcCCCEEEEe
Confidence 1455778888 88754 5664 55566677889999988764
No 64
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.44 E-value=4.9 Score=38.60 Aligned_cols=30 Identities=17% Similarity=0.337 Sum_probs=26.1
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.-|.-.-...|+++|.+.||+|+++++...
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 42 (357)
T cd03795 13 RGGIEQVIRDLAEGLAARGIEVAVLCASPE 42 (357)
T ss_pred CCcHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 458888889999999999999999997653
No 65
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=94.25 E-value=5.2 Score=38.13 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=26.6
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
..|+..-+..+++.|++.||+|++++....
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~ 42 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPW 42 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCC
Confidence 478899999999999999999999997553
No 66
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=94.07 E-value=6.5 Score=38.58 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=27.4
Q ss_pred cEEEEEcC-CCCC-ChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 10 THVLIFPY-PAQG-HMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 10 ~~ili~~~-~~~g-H~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
|+|+++.. ...| =-.-+..||++|+++||+|+++++.
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~ 39 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSH 39 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 46777654 3333 3455699999999999999999874
No 67
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=94.02 E-value=0.054 Score=42.05 Aligned_cols=64 Identities=16% Similarity=0.226 Sum_probs=48.5
Q ss_pred cccccccCCCCCCcEEEEecCCCccC---CH--HHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhH
Q 044731 268 DNVSKWLDGCPDGSVVYACFGSQKVL---SK--EQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGF 335 (443)
Q Consensus 268 ~~l~~wLd~~~~~~vVyvSfGS~~~~---~~--~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~ 335 (443)
..+.+||...+.++-|.+|+||.... .. ..+..++++++.++..++-.+..... ...+.+|+|+
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~----~~lg~lP~nV 96 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQR----AELGELPDNV 96 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCC----GGCCS-TTTE
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHH----HhhCCCCCCC
Confidence 56778998888889999999997643 32 47889999999999999998876532 2235677763
No 68
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=92.88 E-value=11 Score=37.39 Aligned_cols=109 Identities=10% Similarity=0.089 Sum_probs=56.4
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHH-
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSAL- 97 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 97 (443)
.-|.-.-...|+++|+++||+|+++++......-.. .....++++..++... .. .. ....+....
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~~~v~~~~~~~---~~----~~------~~~~~~~~~~ 84 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPV-VEVAPGVRVRNVVAGP---YE----GL------DKEDLPTQLC 84 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCc-cccCCCcEEEEecCCC---cc----cC------CHHHHHHHHH
Confidence 346778899999999999999999997532111000 0001456666553211 00 00 000111111
Q ss_pred hhhhHHHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCceeE
Q 044731 98 GKLYDPIIQWFHSHANPPVAILSDFFLG--WTLNLARELNIVRITF 141 (443)
Q Consensus 98 ~~~~~~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~ 141 (443)
......+..+++....++|+|-+..... .+..++..+++|+|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t 130 (405)
T TIGR03449 85 AFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHT 130 (405)
T ss_pred HHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEe
Confidence 1112233344443223799997664322 3445677789997653
No 69
>PLN00142 sucrose synthase
Probab=92.86 E-value=0.83 Score=49.20 Aligned_cols=105 Identities=16% Similarity=0.248 Sum_probs=53.7
Q ss_pred HHHHHHHhCCceEE----EEeCCCC-------chhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHH
Q 044731 28 DLTHQLSLKNLDIT----ILITPKN-------LPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSA 96 (443)
Q Consensus 28 ~La~~L~~rGh~Vt----~~t~~~~-------~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (443)
.|+++|+++||+|+ ++|---. .+.++.. ....+.+++.+|+.+. ++.-. .-++ ...++..
T Consensus 319 el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v-~~~~~~~I~rvP~g~~----~~~l~-~~i~---ke~l~p~ 389 (815)
T PLN00142 319 EMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKV-SGTEHSHILRVPFRTE----KGILR-KWIS---RFDVWPY 389 (815)
T ss_pred HHHHHHHhcCCCccceeEEEEeccCCccCCcccCcceec-cCCCceEEEecCCCCC----ccccc-cccC---HHHHHHH
Confidence 35578889999875 7773111 1111111 0024667766665321 11100 0001 1223333
Q ss_pred HhhhhHHHHH-HHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCceeE
Q 044731 97 LGKLYDPIIQ-WFHSHANPPVAILSDFFLG--WTLNLARELNIVRITF 141 (443)
Q Consensus 97 ~~~~~~~~~~-ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~ 141 (443)
+..+...+.+ +.++..++||+|....... .+..+++++|||.+..
T Consensus 390 L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T 437 (815)
T PLN00142 390 LETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTI 437 (815)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEE
Confidence 3344333333 3233334799999996444 3458999999998754
No 70
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=92.85 E-value=1 Score=39.96 Aligned_cols=44 Identities=11% Similarity=0.087 Sum_probs=30.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
|+||+.-==+. +.--+..|+++|.+.||+|+++.+....+...+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g~ 44 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGTGH 44 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTSTT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCcce
Confidence 45555554333 455678899999888999999999876554443
No 71
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=92.44 E-value=1.9 Score=37.30 Aligned_cols=91 Identities=19% Similarity=0.180 Sum_probs=51.9
Q ss_pred hCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHH---hhhhHHHHHHHHhC
Q 044731 35 LKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSAL---GKLYDPIIQWFHSH 111 (443)
Q Consensus 35 ~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~ 111 (443)
++||+|++++........ .|++.+.+..+ .+...+ .. .....+-..+ ......+.+|.++
T Consensus 1 q~gh~v~fl~~~~~~~~~-------~GV~~~~y~~~--~~~~~~---~~----~~~~~~e~~~~rg~av~~a~~~L~~~- 63 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP-------PGVRVVRYRPP--RGPTPG---TH----PYVRDFEAAVLRGQAVARAARQLRAQ- 63 (171)
T ss_pred CCCCEEEEEecCCCCCCC-------CCcEEEEeCCC--CCCCCC---CC----cccccHHHHHHHHHHHHHHHHHHHHc-
Confidence 489999999954332221 26776655321 111111 11 1111222211 2334455555444
Q ss_pred CCCCcEEEeCCCcchHHHHHHHh-CCCceeEe
Q 044731 112 ANPPVAILSDFFLGWTLNLAREL-NIVRITFF 142 (443)
Q Consensus 112 ~~~~D~vI~D~~~~~~~~vA~~l-giP~i~~~ 142 (443)
+=.||+||....+..++.+-+.+ ++|.+.+.
T Consensus 64 Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 64 GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 22789999999888888899999 89988763
No 72
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=92.39 E-value=1.7 Score=46.75 Aligned_cols=124 Identities=18% Similarity=0.237 Sum_probs=67.0
Q ss_pred CcEEEEEcCCC-------------CCChHHHHHHHHH--------HHhCCc----eEEEEeCCCCc-------hhhhhhc
Q 044731 9 ATHVLIFPYPA-------------QGHMLPLLDLTHQ--------LSLKNL----DITILITPKNL-------PIVSSLL 56 (443)
Q Consensus 9 ~~~ili~~~~~-------------~gH~~P~l~La~~--------L~~rGh----~Vt~~t~~~~~-------~~v~~~~ 56 (443)
.++|+++...+ -|+..-.+.+|++ |+++|| +|+++|--... +.++..
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~- 333 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKV- 333 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccc-
Confidence 46788866544 4666677778876 578999 77798853211 111111
Q ss_pred cCCCCeeEEEeCCCCCCC-CCCCcccccccCCCChHHHHHHHhhhhHHHHH-HHHhCCCCCcEEEeCCCcc--hHHHHHH
Q 044731 57 DARPAIQTLVLPFPSHPS-VPAGVENVKELGNRGNLPIMSALGKLYDPIIQ-WFHSHANPPVAILSDFFLG--WTLNLAR 132 (443)
Q Consensus 57 ~~~~~i~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll~~~~~~~D~vI~D~~~~--~~~~vA~ 132 (443)
....+.+++.+|+.+... ..+.+ ++ ...++..+..+...+.+ +..+...+||+|+...... .+..+++
T Consensus 334 ~~~~~~~I~rvp~g~~~~~~~~~~-----i~---k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~ 405 (784)
T TIGR02470 334 YGTEHAWILRVPFRTENGIILRNW-----IS---RFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLAR 405 (784)
T ss_pred cCCCceEEEEecCCCCcccccccc-----cC---HHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHH
Confidence 002567777666532111 00000 01 12233333344333333 3333334899999986443 3457899
Q ss_pred HhCCCceeE
Q 044731 133 ELNIVRITF 141 (443)
Q Consensus 133 ~lgiP~i~~ 141 (443)
.+|||.+..
T Consensus 406 ~lgVP~v~t 414 (784)
T TIGR02470 406 KLGVTQCTI 414 (784)
T ss_pred hcCCCEEEE
Confidence 999996644
No 73
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=92.12 E-value=0.015 Score=50.36 Aligned_cols=41 Identities=34% Similarity=0.365 Sum_probs=35.0
Q ss_pred cchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHH
Q 044731 354 DQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGET 399 (443)
Q Consensus 354 DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~y 399 (443)
+|..||..+++. |.|..+.. ...+.++|.++|.+++.+ +.+
T Consensus 107 ~q~~na~~~~~~-g~~~~~~~---~~~~~~~L~~~i~~l~~~-~~~ 147 (167)
T PF04101_consen 107 HQEENAKELAKK-GAAIMLDE---SELNPEELAEAIEELLSD-PEK 147 (167)
T ss_dssp CHHHHHHHHHHC-CCCCCSEC---CC-SCCCHHHHHHCHCCC-HH-
T ss_pred HHHHHHHHHHHc-CCccccCc---ccCCHHHHHHHHHHHHcC-cHH
Confidence 999999999988 99999985 677799999999999988 444
No 74
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=92.04 E-value=12 Score=35.82 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=26.6
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.-|+..-...|++.|+++||+|+++++...
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 42 (375)
T cd03821 13 YGGPVRVVLNLSKALAKLGHEVTVATTDAG 42 (375)
T ss_pred cCCeehHHHHHHHHHHhcCCcEEEEecCCC
Confidence 458999999999999999999999997543
No 75
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=91.61 E-value=2.4 Score=47.04 Aligned_cols=40 Identities=10% Similarity=0.257 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCC---------------CCChHHHHHHHHHHHhCC--ceEEEEeCC
Q 044731 7 SRATHVLIFPYPA---------------QGHMLPLLDLTHQLSLKN--LDITILITP 46 (443)
Q Consensus 7 ~~~~~ili~~~~~---------------~gH~~P~l~La~~L~~rG--h~Vt~~t~~ 46 (443)
.+++.|+++...+ -|+..-...||++|+++| |+|+++|-.
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~ 223 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQ 223 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3467788776432 246677899999999999 899999953
No 76
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=91.50 E-value=15 Score=35.88 Aligned_cols=38 Identities=8% Similarity=0.140 Sum_probs=28.2
Q ss_pred cEEEEEcC--CCCCCh-HHHHHHHHHHHhC--CceEEEEeCCC
Q 044731 10 THVLIFPY--PAQGHM-LPLLDLTHQLSLK--NLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~--~~~gH~-~P~l~La~~L~~r--Gh~Vt~~t~~~ 47 (443)
|+|+++.. +..|=+ .-+..++++|.++ ||+|++++...
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~ 43 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRND 43 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCC
Confidence 46777654 233444 7779999999999 89999988644
No 77
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=91.14 E-value=2 Score=41.01 Aligned_cols=105 Identities=11% Similarity=0.026 Sum_probs=57.5
Q ss_pred cEEEEEcCC--------CCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccc
Q 044731 10 THVLIFPYP--------AQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVEN 81 (443)
Q Consensus 10 ~~ili~~~~--------~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 81 (443)
|+|++++.. .-|--.-...|++.|.++||+|++++....... ....... +.....
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~----------~~~~~~~-------~~~~~~ 63 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTA----------APLVPVV-------PEPLRL 63 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcc----------cceeecc-------CCCccc
Confidence 467776643 224457789999999999999999997542110 1111110 000000
Q ss_pred ccccCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeE
Q 044731 82 VKELGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITF 141 (443)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~ 141 (443)
... ............+..++++. ++|+|.+........ ++...++|.|..
T Consensus 64 ------~~~-~~~~~~~~~~~~~~~~~~~~--~~Divh~~~~~~~~~-~~~~~~~~~v~~ 113 (335)
T cd03802 64 ------DAP-GRDRAEAEALALAERALAAG--DFDIVHNHSLHLPLP-FARPLPVPVVTT 113 (335)
T ss_pred ------ccc-hhhHhhHHHHHHHHHHHhcC--CCCEEEecCcccchh-hhcccCCCEEEE
Confidence 000 00000112223445566666 899998876554444 677788887653
No 78
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=91.12 E-value=2.1 Score=43.27 Aligned_cols=107 Identities=16% Similarity=0.174 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHhCCc--eEEEEeCCCCch----hh-hhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHH
Q 044731 22 HMLPLLDLTHQLSLKNL--DITILITPKNLP----IV-SSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIM 94 (443)
Q Consensus 22 H~~P~l~La~~L~~rGh--~Vt~~t~~~~~~----~v-~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (443)
=-.-+..|+++|+++|| +|+++|...... .. ........+++++.++... .... ....+.
T Consensus 28 ~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~-----~~~~--------~~~~~~ 94 (439)
T TIGR02472 28 QTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGP-----RRYL--------RKELLW 94 (439)
T ss_pred cchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCC-----CCCc--------Chhhhh
Confidence 33567899999999998 999999532110 00 0000002456666554211 0000 001111
Q ss_pred HHHhhhhHHHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCceeE
Q 044731 95 SALGKLYDPIIQWFHSHANPPVAILSDFFLG--WTLNLARELNIVRITF 141 (443)
Q Consensus 95 ~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~ 141 (443)
..+..+...+..++++...+||+|-+..... .+..++..+|+|+|..
T Consensus 95 ~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t 143 (439)
T TIGR02472 95 PYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFT 143 (439)
T ss_pred hhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEe
Confidence 1122333444455554322799998875332 2345677789997653
No 79
>PRK00654 glgA glycogen synthase; Provisional
Probab=90.76 E-value=2.5 Score=43.04 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=28.8
Q ss_pred cEEEEEcCC------CCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 10 THVLIFPYP------AQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 10 ~~ili~~~~------~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
|+|++++.- .-|.-.-...|+++|+++||+|+++++.
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~ 43 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPG 43 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 467776542 2366677799999999999999999974
No 80
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=90.72 E-value=24 Score=36.95 Aligned_cols=49 Identities=12% Similarity=0.214 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044731 378 SVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 378 ~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 431 (443)
+..|+++|.+++ ++|.| +.+|++..+=-+.+++.+++|-. ..++.+..+
T Consensus 555 ~~~tpe~La~~l-~lL~d-~~~r~~~~~~l~~lr~~Lg~~~~---~~~~~~~~~ 603 (608)
T PRK01021 555 KDFQPEEVAAAL-DILKT-SQSKEKQKDACRDLYQAMNESAS---TMKECLSLI 603 (608)
T ss_pred ccCCHHHHHHHH-HHhcC-HHHHHHHHHHHHHHHHHhcCCCC---CHHHHHHHH
Confidence 578999999997 88888 67777766666666666654444 455555433
No 81
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=90.03 E-value=4.6 Score=38.11 Aligned_cols=110 Identities=15% Similarity=0.066 Sum_probs=69.2
Q ss_pred CCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHH
Q 044731 18 PAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSAL 97 (443)
Q Consensus 18 ~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (443)
.-.-|+.-|..+-++|.++||+|.+.+-+.. .+...++ ..|+.+.++.- -+.. ...+.+...
T Consensus 8 ~n~~hvhfFk~lI~elekkG~ev~iT~rd~~--~v~~LLd-~ygf~~~~Igk-------~g~~-------tl~~Kl~~~- 69 (346)
T COG1817 8 GNPPHVHFFKNLIWELEKKGHEVLITCRDFG--VVTELLD-LYGFPYKSIGK-------HGGV-------TLKEKLLES- 69 (346)
T ss_pred CCcchhhHHHHHHHHHHhCCeEEEEEEeecC--cHHHHHH-HhCCCeEeecc-------cCCc-------cHHHHHHHH-
Confidence 3456888899999999999999986554332 1222111 15666665531 0000 111122221
Q ss_pred hhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHH
Q 044731 98 GKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFL 148 (443)
Q Consensus 98 ~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~ 148 (443)
....-.+.++..+. +||+.|. ...+.+..+|--+|+|.|.+.-..-+.
T Consensus 70 ~eR~~~L~ki~~~~--kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ehA~ 117 (346)
T COG1817 70 AERVYKLSKIIAEF--KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEHAE 117 (346)
T ss_pred HHHHHHHHHHHhhc--CCceEee-cCCcchhhHHhhcCCceEEecCChhHH
Confidence 12233456777777 9999999 667778899999999999997776544
No 82
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=89.77 E-value=16 Score=36.07 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHH
Q 044731 377 DSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTR 422 (443)
Q Consensus 377 ~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~ 422 (443)
++..|++.|.+++.+++.| +..++..+...+.+++..+.|.++..
T Consensus 322 Q~~~~~~~i~~~~~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (373)
T PF02684_consen 322 QEDATPENIAAELLELLEN-PEKRKKQKELFREIRQLLGPGASSRA 366 (373)
T ss_pred cccCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhhhhccCCHH
Confidence 4788999999999999999 67788888888888887677766543
No 83
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=89.40 E-value=3.2 Score=40.02 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=56.3
Q ss_pred CCChHHHHHHHHHHHhCCceEEEEeCCCCch-hhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHh
Q 044731 20 QGHMLPLLDLTHQLSLKNLDITILITPKNLP-IVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALG 98 (443)
Q Consensus 20 ~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~-~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (443)
-|--.-...|+++|+++||+|++++...... .+.. .+++++.++.. .. .....+.
T Consensus 10 gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----~~~~~~~~~~~------~~---------~~~~~~~---- 65 (355)
T cd03819 10 GGVERGTLELARALVERGHRSLVASAGGRLVAELEA-----EGSRHIKLPFI------SK---------NPLRILL---- 65 (355)
T ss_pred CcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHh-----cCCeEEEcccc------cc---------chhhhHH----
Confidence 5666788999999999999999998644221 2221 45565544321 00 0000110
Q ss_pred hhhHHHHHHHHhCCCCCcEEEeCCCcc-hH-HHHHHHhCCCceeEe
Q 044731 99 KLYDPIIQWFHSHANPPVAILSDFFLG-WT-LNLARELNIVRITFF 142 (443)
Q Consensus 99 ~~~~~~~~ll~~~~~~~D~vI~D~~~~-~~-~~vA~~lgiP~i~~~ 142 (443)
....+..++++. +||+|++..... +. ..++..+++|++...
T Consensus 66 -~~~~l~~~~~~~--~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~ 108 (355)
T cd03819 66 -NVARLRRLIREE--KVDIVHARSRAPAWSAYLAARRTRPPFVTTV 108 (355)
T ss_pred -HHHHHHHHHHHc--CCCEEEECCCchhHHHHHHHHhcCCCEEEEe
Confidence 112344556666 899999876433 32 345667789987543
No 84
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=89.09 E-value=21 Score=34.04 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=27.7
Q ss_pred EEEEcCC---CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 12 VLIFPYP---AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 12 ili~~~~---~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|+++... ..|--.-...|+++|+++||+|++++...
T Consensus 2 I~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 40 (366)
T cd03822 2 IALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAA 40 (366)
T ss_pred eEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeec
Confidence 5554432 34777889999999999999999998643
No 85
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=89.08 E-value=2.8 Score=35.61 Aligned_cols=74 Identities=20% Similarity=0.050 Sum_probs=49.4
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-ccchhhHH
Q 044731 282 VVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-ADQFVNAR 360 (443)
Q Consensus 282 vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-~DQ~~na~ 360 (443)
.+|+|+||......+.++..+.+|.+.+.--++....- +...+|-++ .+.|.||.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~S~~------------------------y~t~p~G~~~Q~~FlN~v 58 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAVSPI------------------------YETPPVGYEDQPDFLNAV 58 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEeccc------------------------eecCCCCCCCCcchheEE
Confidence 69999999998777889999999988765434443321 122256555 56666753
Q ss_pred HHHhhcceeEEeecCCCCCCCHHHHHHHHHHH
Q 044731 361 LLVDDLRVAVLVCEGGDSVPDSDELGKVIGES 392 (443)
Q Consensus 361 ~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~v 392 (443)
+.++ ..++..++-+.++++
T Consensus 59 ---------~~v~----T~L~p~eLL~~l~~i 77 (160)
T COG0801 59 ---------VEVE----TTLSPRELLARLQAI 77 (160)
T ss_pred ---------EEEe----ccCCHHHHHHHHHHH
Confidence 3344 467777777777665
No 86
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=88.36 E-value=1.5 Score=37.14 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=23.1
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.-|=-.-+..|+++|+++||+||++++..
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 34666889999999999999999998653
No 87
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=86.89 E-value=7.8 Score=39.44 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=22.3
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|=-.-...|+++|+++||+|+++++..
T Consensus 17 Gl~~~~~~L~~aL~~~G~~V~Vi~p~y 43 (476)
T cd03791 17 GLGDVVGALPKALAKLGHDVRVIMPKY 43 (476)
T ss_pred cHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 444566889999999999999999743
No 88
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=86.51 E-value=29 Score=32.58 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=29.5
Q ss_pred EEEEcC--CCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 12 VLIFPY--PAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 12 ili~~~--~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|+++.. +..|+..-+..++++|.+.||+|++++...
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~ 39 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRD 39 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCC
Confidence 455443 367888999999999999999999999754
No 89
>PLN02275 transferase, transferring glycosyl groups
Probab=86.12 E-value=18 Score=35.51 Aligned_cols=56 Identities=13% Similarity=0.167 Sum_probs=36.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCc-eEEEEeCCCCchhhhhhccCCCCeeEEEeC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNL-DITILITPKNLPIVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh-~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~ 68 (443)
++.|+..+-.|.-.-|..++..|+++|| +||+++........+.. . ..++++..++
T Consensus 6 ~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~-~-~~~v~v~r~~ 62 (371)
T PLN02275 6 RAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALL-N-HPSIHIHLMV 62 (371)
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHh-c-CCcEEEEECC
Confidence 4555555667777888899999999987 79999864322111111 0 2567777665
No 90
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=86.04 E-value=5.6 Score=35.07 Aligned_cols=26 Identities=27% Similarity=0.461 Sum_probs=24.5
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEe
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILI 44 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t 44 (443)
..||-.....|++.|.++||+|+++.
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~ 37 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA 37 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE
Confidence 66999999999999999999999987
No 91
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=84.07 E-value=3 Score=40.38 Aligned_cols=71 Identities=14% Similarity=0.202 Sum_probs=53.1
Q ss_pred cCceEeecCCCcccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHhcCCC
Q 044731 341 GRGLVLKGWVPQADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQC-GETKIKARELRDKALAAVKSGGS 419 (443)
Q Consensus 341 ~~~~vv~~W~PQ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~-~~yr~~a~~l~~~~r~a~~~gg~ 419 (443)
+..+|+ .++...+..|.+. ++|+.++ +.+++.+++.++..++ ..|++||+++++.++. |--
T Consensus 260 G~PVI~------~~~~~~~~~V~~~-~~G~~v~-------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~ 321 (333)
T PRK09814 260 GLPVIV------WSKAAIADFIVEN-GLGFVVD-------SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYF 321 (333)
T ss_pred CCCEEE------CCCccHHHHHHhC-CceEEeC-------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chh
Confidence 455555 5778888888877 9999986 5678999998865443 6789999999999975 665
Q ss_pred hHHHHHHHHH
Q 044731 420 STRDLETLVQ 429 (443)
Q Consensus 420 s~~~~~~~~~ 429 (443)
..+++.+.+.
T Consensus 322 ~~~~~~~~~~ 331 (333)
T PRK09814 322 TKKALVDAIK 331 (333)
T ss_pred HHHHHHHHHh
Confidence 5555555443
No 92
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=83.85 E-value=42 Score=32.17 Aligned_cols=45 Identities=11% Similarity=0.167 Sum_probs=29.7
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeC
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~ 68 (443)
|=-.-...|+++|.++||+|++++.......... . ..++++..++
T Consensus 16 G~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~~-~--~~~i~~~~~~ 60 (363)
T cd04955 16 GFETFVEELAPRLVARGHEVTVYCRSPYPKQKET-E--YNGVRLIHIP 60 (363)
T ss_pred cHHHHHHHHHHHHHhcCCCEEEEEccCCCCCccc-c--cCCceEEEcC
Confidence 3346678999999999999999997543211001 0 2466766554
No 93
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=82.96 E-value=5.3 Score=36.70 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 23 MLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 23 ~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
.-=+..|++.|. .+++||++.++...+-..+
T Consensus 13 a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~ 43 (252)
T COG0496 13 APGIRALARALR-EGADVTVVAPDREQSGASH 43 (252)
T ss_pred CHHHHHHHHHHh-hCCCEEEEccCCCCccccc
Confidence 334667888888 9999999999877655443
No 94
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=82.15 E-value=48 Score=31.68 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=26.6
Q ss_pred CCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 18 PAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 18 ~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
..-|.-.-...++++|+++||+|++++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~ 40 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSKIQFDFLVTSKE 40 (358)
T ss_pred CCccHHHHHHHHHHhcCccceEEEEEEeCCC
Confidence 4568888899999999999999999997543
No 95
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=81.95 E-value=50 Score=31.76 Aligned_cols=37 Identities=22% Similarity=0.382 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCceeE
Q 044731 103 PIIQWFHSHANPPVAILSDFFLG--WTLNLARELNIVRITF 141 (443)
Q Consensus 103 ~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~ 141 (443)
.+..++++. +||+|.+..... .+..++..+|+|+|..
T Consensus 73 ~~~~~~~~~--~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~ 111 (367)
T cd05844 73 QLRRLLRRH--RPDLVHAHFGFDGVYALPLARRLGVPLVVT 111 (367)
T ss_pred HHHHHHHhh--CCCEEEeccCchHHHHHHHHHHcCCCEEEE
Confidence 444467777 899988764332 2346778899998754
No 96
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=81.78 E-value=33 Score=34.19 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=42.0
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLV 428 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~ 428 (443)
.|.......+.+. +.|..+. ..-+.+++.++|.+++.+ +..++ ++++..++.+++.=+..++.++|+
T Consensus 340 s~vgg~~e~i~~~-~~G~l~~----~~~~~~~la~~I~~ll~~-~~~~~---~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 340 TNVGGTPEIVDNG-GNGLLLS----KDPTPNELVSSLSKFIDN-EEEYQ---TMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCCCCcHHHhcCC-CcEEEeC----CCCCHHHHHHHHHHHHhC-HHHHH---HHHHHHHHHHHHHcCHHHhHHHhc
Confidence 4555555555432 3555554 234789999999999987 55443 455556665556666666776665
No 97
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=81.75 E-value=4.8 Score=33.47 Aligned_cols=60 Identities=10% Similarity=0.024 Sum_probs=44.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~ 68 (443)
++.+|++.+.++.+|-.-..-++..|..+|++|+++...-..+.+..... ..+.+++.++
T Consensus 2 ~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~-~~~~d~V~lS 61 (137)
T PRK02261 2 KKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAI-ETDADAILVS 61 (137)
T ss_pred CCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH-HcCCCEEEEc
Confidence 35689999999999999999999999999999999987665444433221 1344555443
No 98
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=80.88 E-value=22 Score=30.75 Aligned_cols=115 Identities=17% Similarity=0.121 Sum_probs=57.8
Q ss_pred EEcCCCCCChHHHHHHHHHH-HhC-CceEEEEeCCCCc--hhhhhhccC-CCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 14 IFPYPAQGHMLPLLDLTHQL-SLK-NLDITILITPKNL--PIVSSLLDA-RPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 14 i~~~~~~gH~~P~l~La~~L-~~r-Gh~Vt~~t~~~~~--~~v~~~~~~-~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
++-.++-||..=|+.|.+.+ .++ .++..+++..... .++...... .....+..++ ... ...+.
T Consensus 2 l~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~~~~~~~~~~~--------r~r----~v~q~ 69 (170)
T PF08660_consen 2 LVVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSSSKRHKILEIP--------RAR----EVGQS 69 (170)
T ss_pred EEEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhccccceeeccc--------eEE----Eechh
Confidence 34457789999999999999 444 4444444443322 222211000 0111222221 110 01111
Q ss_pred ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchH--HHHHHHh------CCCceeEec
Q 044731 89 GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWT--LNLAREL------NIVRITFFS 143 (443)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~--~~vA~~l------giP~i~~~~ 143 (443)
........+..+...+.-+.+. +||+||+-....|. ..+|..+ |.+.|.+=+
T Consensus 70 ~~~~~~~~l~~~~~~~~il~r~---rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES 129 (170)
T PF08660_consen 70 YLTSIFTTLRAFLQSLRILRRE---RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES 129 (170)
T ss_pred hHhhHHHHHHHHHHHHHHHHHh---CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe
Confidence 1222222222333333333333 89999999877754 3567777 888887744
No 99
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=77.52 E-value=3.9 Score=38.05 Aligned_cols=94 Identities=16% Similarity=0.118 Sum_probs=61.2
Q ss_pred cEEEEEcCC----CCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccccccc
Q 044731 10 THVLIFPYP----AQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKEL 85 (443)
Q Consensus 10 ~~ili~~~~----~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 85 (443)
|||+|++-+ +.||+.=++.||++|.++|..++|++.....+.+.... .++. .++..
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~---~~f~-----------~~~~~------ 60 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVY---EGFK-----------VLEGR------ 60 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhh---hhcc-----------ceeee------
Confidence 578887754 46999999999999999999999998754322110000 0000 00000
Q ss_pred CCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchH---HHHHHHhCCCceeEec
Q 044731 86 GNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWT---LNLARELNIVRITFFS 143 (443)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~---~~vA~~lgiP~i~~~~ 143 (443)
.. ..+.+. +||++|.|...... ..+..+.+.+.+.|-.
T Consensus 61 --------------~~----n~ik~~--k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd 101 (318)
T COG3980 61 --------------GN----NLIKEE--KFDLLIFDSYGLNADDFKLIKEEAGSKILIFDD 101 (318)
T ss_pred --------------cc----cccccc--cCCEEEEeccCCCHHHHHHHHHHhCCcEEEecC
Confidence 00 035555 89999999876643 3677789999887743
No 100
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=76.56 E-value=4.8 Score=32.30 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=33.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
++++.+.++..|.....-++..|.++|++|+++.....
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~ 38 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVP 38 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 48899999999999999999999999999988775443
No 101
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=76.50 E-value=28 Score=34.83 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=57.8
Q ss_pred CChHHHHHHHHHHHhC--CceEEEEeCCCCchh---h---hhhccC--CCCeeEEEeC-CCCCCCCCCCcccccccCCCC
Q 044731 21 GHMLPLLDLTHQLSLK--NLDITILITPKNLPI---V---SSLLDA--RPAIQTLVLP-FPSHPSVPAGVENVKELGNRG 89 (443)
Q Consensus 21 gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~---v---~~~~~~--~~~i~~~~l~-~~~~~~~~~~~~~~~~~~~~~ 89 (443)
|==..+...++.|.++ ||+|+++|+...... + .+.... ..++.++-+. .. ..++.. .. ..
T Consensus 15 g~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~--~~~~~~-----~~--~r 85 (419)
T cd03806 15 GGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYR--KLVEAS-----TY--PR 85 (419)
T ss_pred CchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecce--eeeccc-----cC--Cc
Confidence 5567888899999997 999999998754321 1 111000 1233332220 00 011110 00 11
Q ss_pred hHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHh-CCCceeEec
Q 044731 90 NLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLAREL-NIVRITFFS 143 (443)
Q Consensus 90 ~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~l-giP~i~~~~ 143 (443)
+..+......+.-.++.+. .. +||++|.+..++.++.++..+ ++|++...=
T Consensus 86 ~~~~~~~~~~~~~~~~~~~-~~--~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h 137 (419)
T cd03806 86 FTLLGQALGSMILGLEALL-KL--VPDIFIDTMGYPFTYPLVRLLGGCPVGAYVH 137 (419)
T ss_pred eeeHHHHHHHHHHHHHHHH-hc--CCCEEEEcCCcccHHHHHHHhcCCeEEEEec
Confidence 1122222233333333332 33 799999888777777777654 788877543
No 102
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=76.01 E-value=11 Score=36.56 Aligned_cols=33 Identities=12% Similarity=0.258 Sum_probs=26.5
Q ss_pred EEcCCCCCChHHHHHHHHHHHhC-CceEEEEeCC
Q 044731 14 IFPYPAQGHMLPLLDLTHQLSLK-NLDITILITP 46 (443)
Q Consensus 14 i~~~~~~gH~~P~l~La~~L~~r-Gh~Vt~~t~~ 46 (443)
++..+++..+.=+.+|.++|+++ |+++.++.|.
T Consensus 3 ~~~~gtr~~~~~~~pl~~~l~~~~~~~~~~~~tg 36 (363)
T cd03786 3 LVVTGTRPEYIKLAPLIRALKKDPGFELVLVVTG 36 (363)
T ss_pred EEEEecCHHHHHHHHHHHHHhcCCCCCEEEEEeC
Confidence 34567788888888999999997 9999977664
No 103
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=75.69 E-value=60 Score=30.07 Aligned_cols=28 Identities=18% Similarity=0.165 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 26 LLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 26 ~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
+..|+++|++ +|+|+++.+....+-..+
T Consensus 16 l~aL~~~l~~-~~~V~VvAP~~~~Sg~g~ 43 (253)
T PRK13933 16 INTLAELLSK-YHEVIIVAPENQRSASSH 43 (253)
T ss_pred HHHHHHHHHh-CCcEEEEccCCCCccccc
Confidence 7788888865 689999998776554433
No 104
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=75.30 E-value=76 Score=30.11 Aligned_cols=29 Identities=17% Similarity=0.118 Sum_probs=24.2
Q ss_pred CCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 20 QGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 20 ~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
-|--.-+..|+++|+++||+|++++....
T Consensus 15 gG~~~~~~~l~~~L~~~~~~v~~~~~~~~ 43 (365)
T cd03809 15 TGIGRYARELLRALLKLDPEEVLLLLPGA 43 (365)
T ss_pred CcHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence 45567789999999999999999987543
No 105
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=74.38 E-value=33 Score=31.56 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 25 PLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 25 P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
-+..|+++|.+.| +|+++.+....+...+
T Consensus 15 Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ 43 (244)
T TIGR00087 15 GIRALYQALKELG-EVTVVAPARQRSGTGH 43 (244)
T ss_pred hHHHHHHHHHhCC-CEEEEeCCCCcccccc
Confidence 4678889999988 8999998876655544
No 106
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=73.55 E-value=38 Score=31.53 Aligned_cols=29 Identities=10% Similarity=-0.074 Sum_probs=20.3
Q ss_pred HHHHHHHHHhC---CceEEEEeCCCCchhhhh
Q 044731 26 LLDLTHQLSLK---NLDITILITPKNLPIVSS 54 (443)
Q Consensus 26 ~l~La~~L~~r---Gh~Vt~~t~~~~~~~v~~ 54 (443)
+..|++.|++. |++|+++.+....+-..+
T Consensus 16 l~aL~~~l~~~~~~~~~V~VVAP~~eqSg~gh 47 (261)
T PRK13931 16 LEVLEQIATELAGPDGEVWTVAPAFEQSGVGH 47 (261)
T ss_pred HHHHHHHHHHhccCCCeEEEEeCCCCCCCCcc
Confidence 55677777663 479999998876555444
No 107
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=72.50 E-value=52 Score=32.01 Aligned_cols=46 Identities=24% Similarity=0.392 Sum_probs=39.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhh
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSS 54 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~ 54 (443)
.++|||+-...-|++.-.+++.+.|.++ +.+|++++...+.+.++.
T Consensus 5 ~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 52 (352)
T PRK10422 5 FRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSE 52 (352)
T ss_pred CceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhcc
Confidence 4689999999999999999999999994 999999998777665544
No 108
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=71.98 E-value=25 Score=27.84 Aligned_cols=85 Identities=16% Similarity=0.032 Sum_probs=51.9
Q ss_pred ChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhhh
Q 044731 22 HMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKLY 101 (443)
Q Consensus 22 H~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (443)
+-.=++.+++.|.+.|+++ +.|+.....++. .|+.+..+.. .+++ ..
T Consensus 10 ~K~~~~~~a~~l~~~G~~i--~AT~gTa~~L~~-----~Gi~~~~v~~-----~~~~---------------------g~ 56 (112)
T cd00532 10 VKAMLVDLAPKLSSDGFPL--FATGGTSRVLAD-----AGIPVRAVSK-----RHED---------------------GE 56 (112)
T ss_pred cHHHHHHHHHHHHHCCCEE--EECcHHHHHHHH-----cCCceEEEEe-----cCCC---------------------CC
Confidence 4456889999999999986 455555555554 5666654421 1110 11
Q ss_pred HHHHHHHHh-CCCCCcEEEe--CCCc-----chH---HHHHHHhCCCceeE
Q 044731 102 DPIIQWFHS-HANPPVAILS--DFFL-----GWT---LNLARELNIVRITF 141 (443)
Q Consensus 102 ~~~~~ll~~-~~~~~D~vI~--D~~~-----~~~---~~vA~~lgiP~i~~ 141 (443)
+.+.+++++ . ++|+||. +... ..+ ...|..+|||+++-
T Consensus 57 ~~i~~~i~~~g--~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~ 105 (112)
T cd00532 57 PTVDAAIAEKG--KFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTP 105 (112)
T ss_pred cHHHHHHhCCC--CEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEEC
Confidence 234455565 5 8999988 3222 113 35788899998753
No 109
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=71.54 E-value=44 Score=32.81 Aligned_cols=113 Identities=14% Similarity=0.080 Sum_probs=62.0
Q ss_pred EEcCCCCCChHHHHHHHHHHHh-CCceEEEEeCCCCc-hhh----hhhccCCCCeeEEEeCCCCCCCCCCCcccccccCC
Q 044731 14 IFPYPAQGHMLPLLDLTHQLSL-KNLDITILITPKNL-PIV----SSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 14 i~~~~~~gH~~P~l~La~~L~~-rGh~Vt~~t~~~~~-~~v----~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
++-++++..+.=|.++.++|.+ .+.++.++.|--.. +.. ..... .++... + .+.-....
T Consensus 4 ~~v~GtRpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~--~~~~~~--~-----~~~~~~~~------ 68 (365)
T TIGR03568 4 CVVTGTRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEK--DGFDID--E-----KIEILLDS------ 68 (365)
T ss_pred EEEEecChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHH--cCCCCC--C-----ccccccCC------
Confidence 3456788888889999999998 47888877764332 111 11000 112110 0 00000000
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCC--Ccc-hHHHHHHHhCCCceeEec
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDF--FLG-WTLNLARELNIVRITFFS 143 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~--~~~-~~~~vA~~lgiP~i~~~~ 143 (443)
+....+......+...+.+++.+. +||+||+-. +.. .+..+|..+|||++-+.-
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~--~Pd~vlv~GD~~~~la~alaA~~~~IPv~Hvea 125 (365)
T TIGR03568 69 DSNAGMAKSMGLTIIGFSDAFERL--KPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHG 125 (365)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHhCCcEEEEEC
Confidence 000112222233445666777877 899988765 222 445788999999886543
No 110
>PLN02846 digalactosyldiacylglycerol synthase
Probab=71.26 E-value=6.1 Score=40.08 Aligned_cols=40 Identities=20% Similarity=0.268 Sum_probs=30.9
Q ss_pred CCcEEEEEcCCC----CCChHHHHHHHHHHHhCC-ceEEEEeCCC
Q 044731 8 RATHVLIFPYPA----QGHMLPLLDLTHQLSLKN-LDITILITPK 47 (443)
Q Consensus 8 ~~~~ili~~~~~----~gH~~P~l~La~~L~~rG-h~Vt~~t~~~ 47 (443)
++|||+|++-.. -|=..-.+.++..|+++| |+|+++.+..
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~ 47 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWL 47 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCC
Confidence 468999998533 355466677788999999 8999998743
No 111
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=70.84 E-value=31 Score=26.00 Aligned_cols=80 Identities=14% Similarity=0.177 Sum_probs=46.5
Q ss_pred HHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhhhHHHH
Q 044731 26 LLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKLYDPII 105 (443)
Q Consensus 26 ~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (443)
++.+++.|++.|+++ ++|....+.++. .|+.+..+.. ...++ . +.+.
T Consensus 2 ~~~~~~~l~~lG~~i--~AT~gTa~~L~~-----~Gi~~~~~~~----ki~~~-----------~-----------~~i~ 48 (90)
T smart00851 2 LVELAKRLAELGFEL--VATGGTAKFLRE-----AGLPVKTLHP----KVHGG-----------I-----------LAIL 48 (90)
T ss_pred HHHHHHHHHHCCCEE--EEccHHHHHHHH-----CCCcceeccC----CCCCC-----------C-----------HHHH
Confidence 468999999999997 355455555554 4555421110 00000 0 1244
Q ss_pred HHHHhCCCCCcEEEeCCC--c-------chHHHHHHHhCCCcee
Q 044731 106 QWFHSHANPPVAILSDFF--L-------GWTLNLARELNIVRIT 140 (443)
Q Consensus 106 ~ll~~~~~~~D~vI~D~~--~-------~~~~~vA~~lgiP~i~ 140 (443)
++++.. ++|+||.-.. . ......|...|||+++
T Consensus 49 ~~i~~g--~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~T 90 (90)
T smart00851 49 DLIKNG--EIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGAT 90 (90)
T ss_pred HHhcCC--CeEEEEECCCcCcceeccCcHHHHHHHHHcCCCeeC
Confidence 556665 8999988432 1 1233678889999763
No 112
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=69.92 E-value=5 Score=30.85 Aligned_cols=85 Identities=15% Similarity=0.117 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhhhHHHH
Q 044731 26 LLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKLYDPII 105 (443)
Q Consensus 26 ~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (443)
++++|+.|++.|+++ +.|...++.++. .|+.+..+... ...+ +.... . ..+.
T Consensus 2 ~~~~a~~l~~lG~~i--~AT~gTa~~L~~-----~Gi~~~~v~~~----~~~~-~~~~g----~------------~~i~ 53 (95)
T PF02142_consen 2 IVPLAKRLAELGFEI--YATEGTAKFLKE-----HGIEVTEVVNK----IGEG-ESPDG----R------------VQIM 53 (95)
T ss_dssp HHHHHHHHHHTTSEE--EEEHHHHHHHHH-----TT--EEECCEE----HSTG--GGTH----C------------HHHH
T ss_pred HHHHHHHHHHCCCEE--EEChHHHHHHHH-----cCCCceeeeee----cccC-ccCCc----h------------hHHH
Confidence 578999999999874 565555566665 67775544210 0000 00000 0 0455
Q ss_pred HHHHhCCCCCcEEEeCCCcc------hH---HHHHHHhCCCcee
Q 044731 106 QWFHSHANPPVAILSDFFLG------WT---LNLARELNIVRIT 140 (443)
Q Consensus 106 ~ll~~~~~~~D~vI~D~~~~------~~---~~vA~~lgiP~i~ 140 (443)
+++++. ++|+||.-..-. .+ ..+|..++||.++
T Consensus 54 ~~i~~~--~IdlVIn~~~~~~~~~~~dg~~irr~a~~~~Ip~~T 95 (95)
T PF02142_consen 54 DLIKNG--KIDLVINTPYPFSDQEHTDGYKIRRAAVEYNIPLFT 95 (95)
T ss_dssp HHHHTT--SEEEEEEE--THHHHHTHHHHHHHHHHHHTTSHEEC
T ss_pred HHHHcC--CeEEEEEeCCCCcccccCCcHHHHHHHHHcCCCCcC
Confidence 677776 899998875332 12 3577888998763
No 113
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=69.35 E-value=47 Score=30.83 Aligned_cols=45 Identities=11% Similarity=0.101 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
++||||+.-==+. |.--+..|+++|.+.| +|+++.+....+...+
T Consensus 4 ~~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ 48 (257)
T PRK13932 4 KKPHILVCNDDGI-EGEGIHVLAASMKKIG-RVTVVAPAEPHSGMSH 48 (257)
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCCCCCCCCcc
Confidence 4678887663222 1134778889998888 7999998776554443
No 114
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=68.61 E-value=49 Score=30.61 Aligned_cols=30 Identities=17% Similarity=0.136 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 24 LPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 24 ~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
--+..|+++|.+. |+|+++.+....+-..+
T Consensus 14 ~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~g~ 43 (250)
T PRK00346 14 PGIRALAEALREL-ADVTVVAPDRERSGASH 43 (250)
T ss_pred hhHHHHHHHHHhC-CCEEEEeCCCCCcCCcc
Confidence 3477889999988 79999998776554443
No 115
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=68.43 E-value=39 Score=32.89 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=61.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC-CceEEEEeCCCCchhhhhhccCCCCeeE-EEeCCCCCCCCCCCcccccccCCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLK-NLDITILITPKNLPIVSSLLDARPAIQT-LVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~v~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
+|+ +-.+++.|+.=+.++.++|.++ +.++.++.|............ ..++.. +.+. +.. . .
T Consensus 2 ~i~-~~~gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~-~~~i~~~~~~~------~~~--~-----~-- 64 (365)
T TIGR00236 2 KVS-IVLGTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLD-LFHLPPDYDLN------IMS--P-----G-- 64 (365)
T ss_pred eEE-EEEecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHH-hcCCCCCeeee------cCC--C-----C--
Confidence 444 4568899999999999999986 556666665433322222211 012210 0000 000 0 0
Q ss_pred ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCC--Ccc-hHHHHHHHhCCCceeE
Q 044731 89 GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDF--FLG-WTLNLARELNIVRITF 141 (443)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~--~~~-~~~~vA~~lgiP~i~~ 141 (443)
.........+...+.+++++. +||+|++.. ... ++..+|..+|||++.+
T Consensus 65 --~~~~~~~~~~~~~l~~~l~~~--~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~ 116 (365)
T TIGR00236 65 --QTLGEITSNMLEGLEELLLEE--KPDIVLVQGDTTTTLAGALAAFYLQIPVGHV 116 (365)
T ss_pred --CCHHHHHHHHHHHHHHHHHHc--CCCEEEEeCCchHHHHHHHHHHHhCCCEEEE
Confidence 011222223335667778887 899998864 222 3567788899998754
No 116
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=67.45 E-value=8.5 Score=31.08 Aligned_cols=38 Identities=5% Similarity=0.002 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCC---ChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYPAQG---HMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~~~g---H~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
++|+|+--|-.+ .-.-...|+.+..+|||+|.++....
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~d 41 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGD 41 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGG
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCc
Confidence 356665554433 34567789999999999999998754
No 117
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=67.42 E-value=12 Score=29.87 Aligned_cols=38 Identities=26% Similarity=0.257 Sum_probs=33.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.++++.+.+..-|-.-+.-++..|.++||+|.++-...
T Consensus 1 ~~v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~~ 38 (121)
T PF02310_consen 1 IRVVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDANV 38 (121)
T ss_dssp -EEEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESSB
T ss_pred CEEEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECCCC
Confidence 37899999999999999999999999999999886543
No 118
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=67.37 E-value=16 Score=32.56 Aligned_cols=44 Identities=11% Similarity=-0.051 Sum_probs=37.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV 52 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v 52 (443)
+.++++.+.++..|-....=++..|..+|++|+++...-..+.+
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l 125 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEF 125 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 56899999999999999999999999999999988765444333
No 119
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=67.30 E-value=73 Score=29.49 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 25 PLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 25 P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
-+..|+++|++ +|+|+++.+....+-..+
T Consensus 15 Gi~aL~~~l~~-~~~V~VvAP~~~qSg~g~ 43 (253)
T PRK13935 15 GIIILAEYLSE-KHEVFVVAPDKERSATGH 43 (253)
T ss_pred HHHHHHHHHHh-CCcEEEEccCCCCccccc
Confidence 36778888865 689999998776554444
No 120
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=65.56 E-value=1.2e+02 Score=28.45 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=27.3
Q ss_pred CCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 17 YPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 17 ~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
+..-|+-.....|+++|.+.||+|.+++....
T Consensus 9 ~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~ 40 (365)
T cd03807 9 LDVGGAERMLVRLLKGLDRDRFEHVVISLTDR 40 (365)
T ss_pred ccCccHHHHHHHHHHHhhhccceEEEEecCcc
Confidence 44578999999999999999999999986543
No 121
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=65.42 E-value=9.1 Score=39.02 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=29.3
Q ss_pred cEEEEEcCC------CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYP------AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~------~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|||++++.- .-|=-.-...|+++|+++||+|+++++..
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y 44 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAY 44 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 467777643 23555677899999999999999999744
No 122
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=64.40 E-value=20 Score=31.82 Aligned_cols=60 Identities=12% Similarity=-0.047 Sum_probs=44.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~ 68 (443)
.+.++++.+.++..|-....-++.-|..+|++|+++...-..+.+..... ..+.+++.++
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~-~~~pd~v~lS 142 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVK-KEKPLMLTGS 142 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHH-HcCCCEEEEc
Confidence 34689999999999999999999999999999999987665444433221 1344455443
No 123
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=64.06 E-value=1.6e+02 Score=29.30 Aligned_cols=33 Identities=9% Similarity=0.293 Sum_probs=25.0
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 13 LIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 13 li~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
++-.+|..||..-...+ ..|.++||+|++++.-
T Consensus 6 ~~~~~P~~setFi~~ei-~~l~~~G~~v~~~s~~ 38 (406)
T PRK15427 6 FLLKFPLSSETFVLNQI-TAFIDMGFEVEIVALQ 38 (406)
T ss_pred EeccCCccchhhHHHHH-HHHHHcCceEEEEEcc
Confidence 33457889998877554 5677899999999853
No 124
>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=63.77 E-value=22 Score=31.85 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=30.3
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 12 VLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 12 ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
+++---.+.|--.-..+++..+...||.||+++|+..
T Consensus 31 ~lIEGd~~tGKSvLsqr~~YG~L~~g~~v~yvsTe~T 67 (235)
T COG2874 31 ILIEGDNGTGKSVLSQRFAYGFLMNGYRVTYVSTELT 67 (235)
T ss_pred EEEECCCCccHHHHHHHHHHHHHhCCceEEEEEechh
Confidence 3334445778888899999999999999999999764
No 125
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=63.56 E-value=74 Score=29.69 Aligned_cols=30 Identities=10% Similarity=-0.016 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 24 LPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 24 ~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
--+..|++.|.+.| +|+++.+....+...+
T Consensus 14 pGi~aL~~al~~~g-~V~VvAP~~eqSg~g~ 43 (266)
T PRK13934 14 PGLRLLYEFVSPLG-EVDVVAPETPKSATGL 43 (266)
T ss_pred HHHHHHHHHHHhCC-cEEEEccCCCCccccc
Confidence 45788999998888 7999998776554443
No 126
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=63.47 E-value=26 Score=33.14 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=34.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCc
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNL 49 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~ 49 (443)
+|.|.=.|+.|--.-.-.|.++|.++||.|.++.-++..
T Consensus 53 viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSS 91 (323)
T COG1703 53 VIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSS 91 (323)
T ss_pred EEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCC
Confidence 677777899999999999999999999999999876543
No 127
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=63.28 E-value=9.5 Score=37.80 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=25.9
Q ss_pred EcCC-CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 15 FPYP-AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 15 ~~~~-~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+|+| -.|.-.=+-+++++|+++ |+||+++-..
T Consensus 8 ~P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~ 40 (397)
T TIGR03087 8 IPYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVD 40 (397)
T ss_pred CCCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCC
Confidence 4554 468899999999999776 9999999654
No 128
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=63.23 E-value=28 Score=33.51 Aligned_cols=16 Identities=6% Similarity=0.069 Sum_probs=13.9
Q ss_pred CHHHHHHHHHHHhcCch
Q 044731 381 DSDELGKVIGESLSQCG 397 (443)
Q Consensus 381 t~e~l~~ai~~vl~~~~ 397 (443)
+.++++++|.+++.+ +
T Consensus 312 ~~~~la~~i~~l~~~-~ 327 (351)
T cd03804 312 TVESLAAAVERFEKN-E 327 (351)
T ss_pred CHHHHHHHHHHHHhC-c
Confidence 678899999999987 5
No 129
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=62.88 E-value=8 Score=37.16 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=28.1
Q ss_pred EEEEcC--CCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 12 VLIFPY--PAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 12 ili~~~--~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
|+++.. ..-|+......|+++|.++||+|++++..
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~ 38 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLT 38 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEe
Confidence 444433 34788999999999999999999999853
No 130
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=62.06 E-value=13 Score=30.28 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=32.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV 52 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v 52 (443)
+||++...++.+=+. ...+.++|.++|++|+++.++...+.+
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~ 42 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFV 42 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHS
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHh
Confidence 378888777766666 999999999999999999986544333
No 131
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=61.75 E-value=69 Score=31.07 Aligned_cols=45 Identities=18% Similarity=0.203 Sum_probs=39.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHh--CCceEEEEeCCCCchhhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSL--KNLDITILITPKNLPIVSS 54 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~--rGh~Vt~~t~~~~~~~v~~ 54 (443)
++|||+-..+-|++.-.+++.+.|++ .+.+|++++.+.+.+.++.
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhc
Confidence 47999999999999999999999999 5999999998766665554
No 132
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=61.71 E-value=35 Score=29.26 Aligned_cols=55 Identities=22% Similarity=0.257 Sum_probs=41.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~ 68 (443)
.++|++.-.|+.|-..-.+.++..|.++|+.|-=+-++.-..--+ -.|++++.+.
T Consensus 5 ~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGk-----R~GF~Ivdl~ 59 (179)
T COG1618 5 AMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGK-----RIGFKIVDLA 59 (179)
T ss_pred ceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCe-----EeeeEEEEcc
Confidence 578999999999999999999999999999988555544321111 1467777653
No 133
>PRK05595 replicative DNA helicase; Provisional
Probab=59.17 E-value=35 Score=34.51 Aligned_cols=42 Identities=14% Similarity=0.184 Sum_probs=34.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHH-hCCceEEEEeCCCCchhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLS-LKNLDITILITPKNLPIV 52 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~-~rGh~Vt~~t~~~~~~~v 52 (443)
-+++..-|+.|=..-.+++|..++ +.|+.|.|++.+-...++
T Consensus 203 liviaarpg~GKT~~al~ia~~~a~~~g~~vl~fSlEms~~~l 245 (444)
T PRK05595 203 MILIAARPSMGKTTFALNIAEYAALREGKSVAIFSLEMSKEQL 245 (444)
T ss_pred EEEEEecCCCChHHHHHHHHHHHHHHcCCcEEEEecCCCHHHH
Confidence 466677899999999999999887 579999999987655444
No 134
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=58.84 E-value=1.1e+02 Score=29.58 Aligned_cols=103 Identities=18% Similarity=0.202 Sum_probs=64.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHh--CCceEEEEeCCCCchhhhhhccCCCCee-EEEeCCCCCCCCCCCcccccccCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSL--KNLDITILITPKNLPIVSSLLDARPAIQ-TLVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~--rGh~Vt~~t~~~~~~~v~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
+|||+-..+-|++.-..++.+.|.+ .+.+|++++...+.+.++. .+.++ ++.++. ... .
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~----~p~vd~vi~~~~--------~~~--~---- 62 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSE----NPDINALYGLDR--------KKA--K---- 62 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhc----CCCccEEEEeCh--------hhh--c----
Confidence 5899999999999999999999999 4899999998777665554 24443 332220 000 0
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCc
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVR 138 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~ 138 (443)
.....+. .....+.. +++. +||++|.=........++...|+|.
T Consensus 63 ~~~~~~~----~~~~l~~~-lr~~--~yD~vidl~~~~~s~ll~~l~~a~~ 106 (344)
T TIGR02201 63 AGERKLA----NQFHLIKV-LRAN--RYDLVVNLTDQWMVAILVKLLNARV 106 (344)
T ss_pred chHHHHH----HHHHHHHH-HHhC--CCCEEEECCcchHHHHHHHhcCCCe
Confidence 0000111 11122223 4444 8999986543344556777789986
No 135
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=57.88 E-value=90 Score=30.08 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=32.5
Q ss_pred cEEEEEcC-CCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 10 THVLIFPY-PAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 10 ~~ili~~~-~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
+||++++- ++-|=..--.++|..|++.|..|-+++++..
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPA 41 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPA 41 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCC
Confidence 57888876 7889888899999999999998777777653
No 136
>PRK06067 flagellar accessory protein FlaH; Validated
Probab=56.45 E-value=40 Score=30.60 Aligned_cols=42 Identities=10% Similarity=0.045 Sum_probs=34.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCch
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLP 50 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~ 50 (443)
..-+++.-.++.|-..-..+++.+.+++|..|.|++.+...+
T Consensus 25 g~~~~i~G~~GsGKt~l~~~~~~~~~~~g~~~~y~~~e~~~~ 66 (234)
T PRK06067 25 PSLILIEGDHGTGKSVLSQQFVYGALKQGKKVYVITTENTSK 66 (234)
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHhCCCEEEEEEcCCCHH
Confidence 345666778899999999999988888999999999876543
No 137
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=56.41 E-value=77 Score=24.83 Aligned_cols=84 Identities=11% Similarity=0.021 Sum_probs=53.8
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhh
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKL 100 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (443)
++-.=+.++++.|.+.|+++ ++++...+.+.. .++.+..+.. ... .
T Consensus 10 ~~k~~~~~~~~~l~~~G~~l--~aT~gT~~~l~~-----~gi~~~~v~~-----~~~----------------------~ 55 (110)
T cd01424 10 RDKPEAVEIAKRLAELGFKL--VATEGTAKYLQE-----AGIPVEVVNK-----VSE----------------------G 55 (110)
T ss_pred CcHhHHHHHHHHHHHCCCEE--EEchHHHHHHHH-----cCCeEEEEee-----cCC----------------------C
Confidence 45667889999999999997 355555555554 5666554421 010 1
Q ss_pred hHHHHHHHHhCCCCCcEEEeCCCc-------chHHHHHHHhCCCcee
Q 044731 101 YDPIIQWFHSHANPPVAILSDFFL-------GWTLNLARELNIVRIT 140 (443)
Q Consensus 101 ~~~~~~ll~~~~~~~D~vI~D~~~-------~~~~~vA~~lgiP~i~ 140 (443)
.+.+.+++++. ++|+||.-... ......|-.+|||+++
T Consensus 56 ~~~i~~~i~~~--~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T 100 (110)
T cd01424 56 RPNIVDLIKNG--EIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT 100 (110)
T ss_pred chhHHHHHHcC--CeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence 12355666666 89999884321 2344688999999874
No 138
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=56.20 E-value=31 Score=31.03 Aligned_cols=60 Identities=8% Similarity=-0.026 Sum_probs=44.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~ 68 (443)
.+.++++.+.++..|-....=++..|..+|++|+++...-..+.+..... ..+.+++.++
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~-~~~~~~V~lS 146 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAK-EHKADIIGLS 146 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHH-HcCCCEEEEc
Confidence 45789999999999999999999999999999999987655444433221 1344455443
No 139
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=55.97 E-value=45 Score=29.24 Aligned_cols=100 Identities=14% Similarity=0.164 Sum_probs=50.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCc-hhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNL-PIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~-~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
.++-+...+.|-++-..+|+++|.++ |++|.+-++.... +....... ..+....+|++
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~--~~v~~~~~P~D----------------- 82 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP--DRVDVQYLPLD----------------- 82 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G--GG-SEEE---S-----------------
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC--CCeEEEEeCcc-----------------
Confidence 56667778889999999999999996 8888876654433 22333221 23333334421
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEE-eCC-CcchHHHHHHHhCCCceeEec
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAIL-SDF-FLGWTLNLARELNIVRITFFS 143 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI-~D~-~~~~~~~vA~~lgiP~i~~~~ 143 (443)
....++++++.+ +||++| .+. +++..+..|++.|||++.+..
T Consensus 83 ------------~~~~~~rfl~~~--~P~~~i~~EtElWPnll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 83 ------------FPWAVRRFLDHW--RPDLLIWVETELWPNLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp ------------SHHHHHHHHHHH----SEEEEES----HHHHHH-----S-EEEEEE
T ss_pred ------------CHHHHHHHHHHh--CCCEEEEEccccCHHHHHHHhhcCCCEEEEee
Confidence 112355778888 787654 443 333445778889999888754
No 140
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=55.77 E-value=1.8e+02 Score=27.41 Aligned_cols=36 Identities=8% Similarity=-0.045 Sum_probs=26.5
Q ss_pred EEEEcC-CCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 12 VLIFPY-PAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 12 ili~~~-~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|++++. ...+.-..+..+++.|.++||+|++++...
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~L~~~g~~v~v~~~~~ 38 (355)
T cd03799 2 IAYLVKEFPRLSETFILREILALEAAGHEVEIFSLRP 38 (355)
T ss_pred EEEECCCCCCcchHHHHHHHHHHHhCCCeEEEEEecC
Confidence 555443 223355678999999999999999998644
No 141
>PRK06321 replicative DNA helicase; Provisional
Probab=55.34 E-value=69 Score=32.72 Aligned_cols=42 Identities=14% Similarity=0.288 Sum_probs=34.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHh-CCceEEEEeCCCCchhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSL-KNLDITILITPKNLPIV 52 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~-rGh~Vt~~t~~~~~~~v 52 (443)
-+++..-|+.|=....+++|...+. .|+.|.|++.+-....+
T Consensus 228 LiiiaarPgmGKTafal~ia~~~a~~~g~~v~~fSLEMs~~ql 270 (472)
T PRK06321 228 LMILAARPAMGKTALALNIAENFCFQNRLPVGIFSLEMTVDQL 270 (472)
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHhcCCeEEEEeccCCHHHH
Confidence 3667778999999999999999985 69999999987655443
No 142
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=54.71 E-value=2.1e+02 Score=29.12 Aligned_cols=41 Identities=22% Similarity=0.360 Sum_probs=32.8
Q ss_pred CCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 044731 279 DGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTS 319 (443)
Q Consensus 279 ~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~ 319 (443)
+..|+|.||.+...++++.+..-++-|++.+...+|..+.+
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~ 323 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFP 323 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETS
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCC
Confidence 45699999999999999999999999999999999988754
No 143
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=53.35 E-value=45 Score=32.48 Aligned_cols=30 Identities=13% Similarity=-0.024 Sum_probs=24.7
Q ss_pred CCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 18 PAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 18 ~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
..-|=..-...+++.|.+.||+|++++...
T Consensus 10 ~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~ 39 (372)
T cd03792 10 YGGGVAEILHSLVPLMRDLGVDTRWEVIKG 39 (372)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCceEEecCC
Confidence 455666778899999999999999998643
No 144
>PRK14098 glycogen synthase; Provisional
Probab=53.08 E-value=23 Score=36.34 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=32.5
Q ss_pred CCCcEEEEEcCC------CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 7 SRATHVLIFPYP------AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 7 ~~~~~ili~~~~------~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+++++|++++.- +-|=-..+..|.++|+++||+|.++.+..
T Consensus 3 ~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y 49 (489)
T PRK14098 3 RRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKY 49 (489)
T ss_pred CCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 445899987642 23666889999999999999999999844
No 145
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=51.73 E-value=38 Score=24.95 Aligned_cols=34 Identities=12% Similarity=0.040 Sum_probs=29.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEE
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITIL 43 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~ 43 (443)
.-++++..+...|..=+..+|+.|++.|..|..+
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~ 49 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAY 49 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 4577888888899999999999999999987754
No 146
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=51.73 E-value=46 Score=32.61 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=37.7
Q ss_pred CCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 378 SVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 378 ~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
+..+++.|.+++.+++.+ ..-|+.-++--+.++..++.+++++.+.+.+++.+.
T Consensus 327 ~~~~pe~la~~l~~ll~~-~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 327 EDCTPENLARALEELLLN-GDRREALKEKFRELHQYLREDPASEIAAQAVLELLL 380 (381)
T ss_pred hhcCHHHHHHHHHHHhcC-hHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhc
Confidence 678999999999999998 433333333333444444566788888888887653
No 147
>PRK09165 replicative DNA helicase; Provisional
Probab=50.79 E-value=60 Score=33.42 Aligned_cols=42 Identities=5% Similarity=0.044 Sum_probs=34.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC---------------CceEEEEeCCCCchhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLK---------------NLDITILITPKNLPIV 52 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~r---------------Gh~Vt~~t~~~~~~~v 52 (443)
-+++..-|+.|=..-.+++|...+.+ |..|.|++.+-....+
T Consensus 219 livIaarpg~GKT~~al~ia~~~a~~~~~~~~~~~~~~~~~g~~vl~fSlEMs~~ql 275 (497)
T PRK09165 219 LIILAGRPSMGKTALATNIAFNAAKAYRREAQPDGSKKAVNGGVVGFFSLEMSAEQL 275 (497)
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHhhcccccccccccccCCCeEEEEeCcCCHHHH
Confidence 46777789999999999999998864 8899999987765444
No 148
>PLN02939 transferase, transferring glycosyl groups
Probab=50.60 E-value=29 Score=38.39 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=33.6
Q ss_pred CCCCCcEEEEEcC---CC---CCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 5 SNSRATHVLIFPY---PA---QGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 5 ~~~~~~~ili~~~---~~---~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+++.++||++++. |. -|=-.....|.++|++.||+|.++++..
T Consensus 477 ~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y 525 (977)
T PLN02939 477 GTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKY 525 (977)
T ss_pred CCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 4456799999874 22 2555778899999999999999999854
No 149
>PLN02316 synthase/transferase
Probab=50.31 E-value=31 Score=38.70 Aligned_cols=53 Identities=8% Similarity=-0.044 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 044731 379 VPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKL 434 (443)
Q Consensus 379 ~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~ 434 (443)
.-+++.|..+|.+++.. |+.....+++..+++|+..=+-.+.+++.++.+...
T Consensus 982 ~~d~~aLa~AL~raL~~---~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 982 GADAAGVDYALNRAISA---WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred CCCHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 34788999999999864 455566677777777766555555666666555443
No 150
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=50.09 E-value=32 Score=27.71 Aligned_cols=40 Identities=10% Similarity=0.034 Sum_probs=35.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCch
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLP 50 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~ 50 (443)
|+++.+.++..|-.-..-++.-|...|++|.++......+
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e 40 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLRQTPE 40 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 5899999999999999999999999999999988765433
No 151
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=49.57 E-value=2.5e+02 Score=27.13 Aligned_cols=44 Identities=25% Similarity=0.194 Sum_probs=26.8
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCC----HHHHHHHHHHHhcCchHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPD----SDELGKVIGESLSQCGETKI 401 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t----~e~l~~ai~~vl~~~~~yr~ 401 (443)
.|-......+.+. +.|..++. +..+ .+++.++|.+++.+ +..++
T Consensus 310 s~~~~~~e~i~~~-~~G~~~~~---~~~~~~~~~~~l~~~i~~l~~~-~~~~~ 357 (388)
T TIGR02149 310 SATGGIPEVVVDG-ETGFLVPP---DNSDADGFQAELAKAINILLAD-PELAK 357 (388)
T ss_pred eCCCCHHHHhhCC-CceEEcCC---CCCcccchHHHHHHHHHHHHhC-HHHHH
Confidence 4555555555544 55666653 2221 28999999999988 55443
No 152
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=48.19 E-value=19 Score=31.59 Aligned_cols=30 Identities=17% Similarity=0.327 Sum_probs=19.4
Q ss_pred cCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 16 PYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 16 ~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+..+.|.+- ..||+++..|||+||+++.+.
T Consensus 24 tN~SSG~~G--~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 24 TNRSSGKMG--AALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp EES--SHHH--HHHHHHHHHTT-EEEEEE-TT
T ss_pred cCCCcCHHH--HHHHHHHHHCCCEEEEEecCc
Confidence 344444433 578999999999999999863
No 153
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=47.81 E-value=23 Score=31.37 Aligned_cols=39 Identities=5% Similarity=-0.045 Sum_probs=29.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.+|++.-.++.|=+.-...|++.|.++||+|+++.|+.-
T Consensus 6 k~IllgVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~aA 44 (196)
T PRK08305 6 KRIGFGLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYTV 44 (196)
T ss_pred CEEEEEEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHhH
Confidence 467766666544443368999999999999999998653
No 154
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=45.90 E-value=1.6e+02 Score=27.32 Aligned_cols=23 Identities=13% Similarity=0.263 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCceEEEEeCCCC
Q 044731 26 LLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 26 ~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
-..|++.|.++||+|+..+....
T Consensus 12 gr~la~~L~~~g~~v~~s~~t~~ 34 (256)
T TIGR00715 12 SRAIAKGLIAQGIEILVTVTTSE 34 (256)
T ss_pred HHHHHHHHHhCCCeEEEEEccCC
Confidence 56899999999999998776443
No 155
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=45.05 E-value=1.1e+02 Score=30.36 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=36.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
-|+|-=-|+-|--.-+++++..|+++| .|-|++++...++++-
T Consensus 95 ~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~Qikl 137 (456)
T COG1066 95 VILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKL 137 (456)
T ss_pred EEEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHH
Confidence 466666799999999999999999999 9999999887766654
No 156
>PRK07773 replicative DNA helicase; Validated
Probab=44.65 E-value=97 Score=34.53 Aligned_cols=42 Identities=14% Similarity=0.261 Sum_probs=34.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC-CceEEEEeCCCCchhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLK-NLDITILITPKNLPIV 52 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~v 52 (443)
-+++..-|+.|=..-.+++|...+.+ |..|.|++.+....++
T Consensus 219 livIagrPg~GKT~fal~ia~~~a~~~~~~V~~fSlEms~~ql 261 (886)
T PRK07773 219 LIIVAARPSMGKTTFGLDFARNCAIRHRLAVAIFSLEMSKEQL 261 (886)
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHhcCCeEEEEecCCCHHHH
Confidence 36777789999999999999999864 8899999987665444
No 157
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=44.65 E-value=21 Score=31.26 Aligned_cols=18 Identities=6% Similarity=0.233 Sum_probs=16.0
Q ss_pred HHHHHHHhCCceEEEEeC
Q 044731 28 DLTHQLSLKNLDITILIT 45 (443)
Q Consensus 28 ~La~~L~~rGh~Vt~~t~ 45 (443)
.++++...|||+||.++-
T Consensus 15 ~i~~EA~~RGHeVTAivR 32 (211)
T COG2910 15 RILKEALKRGHEVTAIVR 32 (211)
T ss_pred HHHHHHHhCCCeeEEEEe
Confidence 578999999999999984
No 158
>PRK05636 replicative DNA helicase; Provisional
Probab=44.30 E-value=57 Score=33.67 Aligned_cols=42 Identities=17% Similarity=0.216 Sum_probs=33.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHh-CCceEEEEeCCCCchhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSL-KNLDITILITPKNLPIV 52 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~-rGh~Vt~~t~~~~~~~v 52 (443)
-+++..-|+.|=..-.+.+|...+. .|..|.|++.+-....+
T Consensus 267 Liiiaarpg~GKT~~al~~a~~~a~~~g~~v~~fSlEMs~~ql 309 (505)
T PRK05636 267 MIIVAARPGVGKSTLALDFMRSASIKHNKASVIFSLEMSKSEI 309 (505)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEEeeCCHHHH
Confidence 4677778999999999999998874 68899999887654443
No 159
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=43.66 E-value=3.2e+02 Score=26.67 Aligned_cols=58 Identities=10% Similarity=0.167 Sum_probs=45.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCc--hhhhhhccCCCCeeEEEeC
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNL--PIVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~--~~v~~~~~~~~~i~~~~l~ 68 (443)
.++.|++++-.+--||-==|.-=|.-|++.|.+|+++.-.... +.+-+ +++|+++.++
T Consensus 10 ~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~----hprI~ih~m~ 69 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLN----HPRIRIHGMP 69 (444)
T ss_pred cccceEEEEEecccCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhc----CCceEEEeCC
Confidence 3456899999999999988999999999999999999854432 22222 4899999886
No 160
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=43.24 E-value=1.2e+02 Score=28.99 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=37.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSS 54 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~ 54 (443)
+|||+-..+-|++.-.+++.+.|.+. +.+|++++.+.+.+.++.
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 46 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLER 46 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhc
Confidence 58999999999999999999999994 999999998766555544
No 161
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=43.08 E-value=42 Score=28.01 Aligned_cols=39 Identities=15% Similarity=0.075 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
++.+|++.+.+..||-.=-.-+++.|+..|.+|......
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~ 49 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLF 49 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceEEecCCc
Confidence 578999999999999999999999999999999876543
No 162
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=42.57 E-value=1.1e+02 Score=30.71 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=25.6
Q ss_pred EEE-EcCCCCCChHHHHHHHHHHHhCCceEEEE
Q 044731 12 VLI-FPYPAQGHMLPLLDLTHQLSLKNLDITIL 43 (443)
Q Consensus 12 ili-~~~~~~gH~~P~l~La~~L~~rGh~Vt~~ 43 (443)
|+| -|..+.|-..-.+.|.+.|++||++|-=+
T Consensus 3 vvIAg~~SG~GKTTvT~glm~aL~~rg~~Vqpf 35 (451)
T COG1797 3 VVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPF 35 (451)
T ss_pred eEEecCCCCCcHHHHHHHHHHHHHhcCCccccc
Confidence 444 34567899999999999999999997643
No 163
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=42.53 E-value=2.2e+02 Score=31.09 Aligned_cols=142 Identities=13% Similarity=0.145 Sum_probs=99.0
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCCcc-------------ccCC------C--CCCCCchhHHHH
Q 044731 280 GSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTSVI-------------HAEG------N--GYGLIPYGFEER 338 (443)
Q Consensus 280 ~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~-------------~~~~------~--~~~~lp~~~~~~ 338 (443)
...+|+++=-+..+|..+...-++.|...|.++++..+++.. .+++ . .-..+++.-...
T Consensus 571 ~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~ 650 (972)
T KOG0202|consen 571 SDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDD 650 (972)
T ss_pred cceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHH
Confidence 358998876666677778888888899999999998776531 0000 0 112455554444
Q ss_pred hhcCceEeecCCCc-------------------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHH
Q 044731 339 VAGRGLVLKGWVPQ-------------------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGET 399 (443)
Q Consensus 339 ~~~~~~vv~~W~PQ-------------------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~y 399 (443)
...++.+...=-|| ||-=--|-.+..+ .+|+.+-. -..+--++|=+-||.| +.|
T Consensus 651 ~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~A-dIGIAMG~-----~GTdVaKeAsDMVL~D-DnF 723 (972)
T KOG0202|consen 651 AVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKA-DIGIAMGI-----SGTDVAKEASDMVLAD-DNF 723 (972)
T ss_pred HhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhc-ccceeecC-----CccHhhHhhhhcEEec-CcH
Confidence 55666666566688 6766666667666 88888864 2335667788888998 466
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccc
Q 044731 400 KIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRF 436 (443)
Q Consensus 400 r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~ 436 (443)
. .+-+|++||.+-+-|+..|+.++...-+
T Consensus 724 s--------tIvaAVEEGr~IynNik~Fir~~lSsnV 752 (972)
T KOG0202|consen 724 S--------TIVAAVEEGRAIYNNIKNFIRYLLSSNV 752 (972)
T ss_pred H--------HHHHHHHHhHHHHHHHHHHHHHHHhhhH
Confidence 4 4567889999999999999999877654
No 164
>TIGR02655 circ_KaiC circadian clock protein KaiC. Members of this family are the circadian clock protein KaiC, part of the kaiABC operon that controls circadian rhythm. It may be universal in Cyanobacteria. Each member has two copies of the KaiC domain (Pfam model pfam06745), which is also found in other proteins. KaiC performs autophosphorylation and acts as its own transcriptional repressor.
Probab=42.51 E-value=3.6e+02 Score=27.67 Aligned_cols=46 Identities=7% Similarity=0.034 Sum_probs=39.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
..-+++.-.|+.|=..-.++++.+.+++|..+.+++.+...+++..
T Consensus 263 gs~~li~G~~G~GKt~l~~~f~~~~~~~ge~~~y~s~eEs~~~i~~ 308 (484)
T TIGR02655 263 DSIILATGATGTGKTLLVSKFLENACANKERAILFAYEESRAQLLR 308 (484)
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCHHHHHH
Confidence 3457777789999999999999999999999999999887665544
No 165
>PRK14099 glycogen synthase; Provisional
Probab=41.70 E-value=44 Score=34.30 Aligned_cols=39 Identities=18% Similarity=0.177 Sum_probs=31.0
Q ss_pred CcEEEEEcC---C---CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 9 ATHVLIFPY---P---AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 9 ~~~ili~~~---~---~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+++|++++. | +-|=-..+..|.++|+++||+|.++.+..
T Consensus 3 ~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y 47 (485)
T PRK14099 3 PLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY 47 (485)
T ss_pred CcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 478888764 2 23666889999999999999999999844
No 166
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=41.23 E-value=24 Score=32.48 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=21.2
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|=-.....|+++|+++||+|+++++..
T Consensus 17 GLgdv~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 17 GLGDVVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred cHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence 344677899999999999999999854
No 167
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=40.87 E-value=2.8e+02 Score=27.31 Aligned_cols=42 Identities=17% Similarity=0.194 Sum_probs=34.0
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhh
Q 044731 12 VLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVS 53 (443)
Q Consensus 12 ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~ 53 (443)
+++.--|+.|=-.-+++++..++.+|..|.|++.+...+++.
T Consensus 85 vLI~G~pG~GKStLllq~a~~~a~~g~~VlYvs~EEs~~qi~ 126 (372)
T cd01121 85 ILIGGDPGIGKSTLLLQVAARLAKRGGKVLYVSGEESPEQIK 126 (372)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEECCcCHHHHH
Confidence 555666889999999999999999999999998876554443
No 168
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=40.53 E-value=45 Score=21.60 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHhcCchHHHHHHHHH
Q 044731 381 DSDELGKVIGESLSQCGETKIKAREL 406 (443)
Q Consensus 381 t~e~l~~ai~~vl~~~~~yr~~a~~l 406 (443)
|+|+|..||..|..++-++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 57899999999986524677666654
No 169
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=40.36 E-value=26 Score=24.36 Aligned_cols=53 Identities=9% Similarity=0.120 Sum_probs=32.8
Q ss_pred CCCCCCCHHHHHHHHHHHhcCchHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHHH
Q 044731 375 GGDSVPDSDELGKVIGESLSQCGETKIKAR-ELRDKALAAVKSGGSSTRDLETLVQE 430 (443)
Q Consensus 375 ~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~-~l~~~~r~a~~~gg~s~~~~~~~~~~ 430 (443)
+.++.++.+++.++++.+... .. .+... .+...++.+ ...+...-++++|+..
T Consensus 12 d~~G~i~~~el~~~~~~~~~~-~~-~~~~~~~~~~~~~~~-D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 12 DGDGYISKEELRRALKHLGRD-MS-DEESDEMIDQIFREF-DTDGDGRISFDEFLNF 65 (66)
T ss_dssp TSSSEEEHHHHHHHHHHTTSH-ST-HHHHHHHHHHHHHHH-TTTSSSSEEHHHHHHH
T ss_pred CccCCCCHHHHHHHHHHhccc-cc-HHHHHHHHHHHHHHh-CCCCcCCCcHHHHhcc
Confidence 446889999999999998653 11 22222 334444433 5555556677777764
No 170
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=40.11 E-value=35 Score=31.60 Aligned_cols=46 Identities=11% Similarity=0.286 Sum_probs=37.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
...+++.=.++.|=..-..++|.+|..+|+.|+|++.+.....++.
T Consensus 105 ~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~ 150 (254)
T COG1484 105 GENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKA 150 (254)
T ss_pred CCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHH
Confidence 3468888888888888899999999999999999998765544444
No 171
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=39.54 E-value=79 Score=26.99 Aligned_cols=44 Identities=23% Similarity=0.287 Sum_probs=28.2
Q ss_pred hhhhHHHHHHHHhCCCCCcEEEeCCCcchHH--H-HHHH--h-CCCceeEec
Q 044731 98 GKLYDPIIQWFHSHANPPVAILSDFFLGWTL--N-LARE--L-NIVRITFFS 143 (443)
Q Consensus 98 ~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~--~-vA~~--l-giP~i~~~~ 143 (443)
..+.+.+.+++++. +||+||+-....... . +.++ + ++|.+++.+
T Consensus 75 ~~~~~~l~~~l~~~--~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 75 RLFARRLIRLLREF--QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHHHhhc--CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 34456788888888 999999997654333 1 2222 3 477666554
No 172
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=38.45 E-value=34 Score=30.06 Aligned_cols=37 Identities=5% Similarity=0.044 Sum_probs=29.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
||++.-.++.|=+.-...+.++|.+.|++|+++.++.
T Consensus 2 ~I~lgITGs~~a~~a~~~ll~~L~~~g~~V~vI~S~~ 38 (187)
T TIGR02852 2 RIGFGLTGSHCTLEAVMPQLEKLVDEGAEVTPIVSET 38 (187)
T ss_pred EEEEEEecHHHHHHHHHHHHHHHHhCcCEEEEEEchh
Confidence 5677666666666655699999999999999998865
No 173
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=38.29 E-value=31 Score=30.21 Aligned_cols=41 Identities=22% Similarity=0.281 Sum_probs=31.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPI 51 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~ 51 (443)
.||++.-.++.|=+. ...+.+.|.++|++|.++.|+.-.+.
T Consensus 2 k~Ill~vtGsiaa~~-~~~li~~L~~~g~~V~vv~T~~A~~f 42 (182)
T PRK07313 2 KNILLAVSGSIAAYK-AADLTSQLTKRGYQVTVLMTKAATKF 42 (182)
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHHCCCEEEEEEChhHHHH
Confidence 367777666666554 79999999999999999998654333
No 174
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=36.74 E-value=53 Score=24.91 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=37.6
Q ss_pred CCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccc
Q 044731 376 GDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRF 436 (443)
Q Consensus 376 ~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~ 436 (443)
.++.++.++|+..++.-|.+ .+... ..+.+.++++ ...|....++++|+..+...-+
T Consensus 22 ~~g~i~~~ELk~ll~~elg~--~ls~~-~~v~~mi~~~-D~d~DG~I~F~EF~~l~~~l~~ 78 (89)
T cd05022 22 GKESLTASEFQELLTQQLPH--LLKDV-EGLEEKMKNL-DVNQDSKLSFEEFWELIGELAK 78 (89)
T ss_pred CCCeECHHHHHHHHHHHhhh--hccCH-HHHHHHHHHh-CCCCCCCCcHHHHHHHHHHHHH
Confidence 35789999999999885543 23221 5677888776 4444455677777776655443
No 175
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=36.68 E-value=54 Score=31.27 Aligned_cols=44 Identities=16% Similarity=0.245 Sum_probs=38.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSS 54 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~ 54 (443)
+|||+-...-|++.-..++.+.|+++ +.+||+++...+.+.++.
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~~~~~~~~ 46 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEGFADIVRL 46 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChhHhhhhhc
Confidence 58899999999999999999999995 999999998776655554
No 176
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=36.10 E-value=34 Score=31.03 Aligned_cols=25 Identities=8% Similarity=0.182 Sum_probs=19.3
Q ss_pred ChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 22 HMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 22 H~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
|+.-|.+.|.+|.++||+|+++..+
T Consensus 47 ~~saMRhfa~~L~~~G~~V~Y~~~~ 71 (224)
T PF04244_consen 47 FFSAMRHFADELRAKGFRVHYIELD 71 (224)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE-TT
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4578999999999999999998754
No 177
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=36.08 E-value=1.2e+02 Score=22.44 Aligned_cols=21 Identities=29% Similarity=0.376 Sum_probs=17.1
Q ss_pred CHHHHHHHHHHHhcCchHHHHH
Q 044731 381 DSDELGKVIGESLSQCGETKIK 402 (443)
Q Consensus 381 t~e~l~~ai~~vl~~~~~yr~~ 402 (443)
+.+++.++|..++.+ +..+++
T Consensus 48 ~~~el~~~i~~ll~~-~~~~~~ 68 (92)
T PF13524_consen 48 DPEELAEKIEYLLEN-PEERRR 68 (92)
T ss_pred CHHHHHHHHHHHHCC-HHHHHH
Confidence 899999999999998 544443
No 178
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=35.96 E-value=4.3e+02 Score=25.85 Aligned_cols=49 Identities=18% Similarity=0.132 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044731 380 PDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRK 433 (443)
Q Consensus 380 ~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~ 433 (443)
.+.+++.++|.+++.+ +..+ ++++..++...+.=+-.+..+++.+.+.+
T Consensus 329 ~d~~~la~~I~~ll~d-~~~~----~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 329 MTSDSIISDINRTLAD-PELT----QIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred CCHHHHHHHHHHHHcC-HHHH----HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4789999999999998 6643 23333333222333444555556555543
No 179
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=35.94 E-value=44 Score=23.70 Aligned_cols=20 Identities=15% Similarity=0.154 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCceEEEEeCC
Q 044731 27 LDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 27 l~La~~L~~rGh~Vt~~t~~ 46 (443)
+..|..|+++|++|+++=..
T Consensus 9 l~aA~~L~~~g~~v~v~E~~ 28 (68)
T PF13450_consen 9 LAAAYYLAKAGYRVTVFEKN 28 (68)
T ss_dssp HHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHCCCcEEEEecC
Confidence 56789999999999998653
No 180
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=34.80 E-value=81 Score=29.26 Aligned_cols=40 Identities=20% Similarity=-0.061 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCCCcEEEeCCCcc------hHHHHHHHhCCCceeEech
Q 044731 103 PIIQWFHSHANPPVAILSDFFLG------WTLNLARELNIVRITFFSS 144 (443)
Q Consensus 103 ~~~~ll~~~~~~~D~vI~D~~~~------~~~~vA~~lgiP~i~~~~~ 144 (443)
.+.+.+++. .||+|++-.... -+..+|+.||+|.+++...
T Consensus 103 ~La~ai~~~--~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 103 ALAAAAQKA--GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred HHHHHHHHh--CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 344555555 699999965433 3567999999999887654
No 181
>PRK12342 hypothetical protein; Provisional
Probab=34.78 E-value=79 Score=29.32 Aligned_cols=40 Identities=18% Similarity=-0.035 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCCCcEEEeCCCcc------hHHHHHHHhCCCceeEech
Q 044731 103 PIIQWFHSHANPPVAILSDFFLG------WTLNLARELNIVRITFFSS 144 (443)
Q Consensus 103 ~~~~ll~~~~~~~D~vI~D~~~~------~~~~vA~~lgiP~i~~~~~ 144 (443)
.+...+++. .||+|++--... -+..+|+.||+|.+++...
T Consensus 100 ~La~~i~~~--~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 100 ALAAAIEKI--GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred HHHHHHHHh--CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 344555555 699999965443 2568999999999887653
No 182
>TIGR03878 thermo_KaiC_2 KaiC domain protein, AF_0795 family. This KaiC domain-containing protein family occurs sporadically across a broad taxonomic range (Euryarchaeota, Aquificae, Dictyoglomi, Epsilonproteobacteria, and Firmicutes), but exclusively in thermophiles.
Probab=34.18 E-value=2.7e+02 Score=25.68 Aligned_cols=40 Identities=8% Similarity=0.044 Sum_probs=33.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCc
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNL 49 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~ 49 (443)
.-+++.-.|+.|=..-.++++.+.+++|..|.|++.+...
T Consensus 37 s~~lI~G~pGtGKT~l~~qf~~~~a~~Ge~vlyis~Ee~~ 76 (259)
T TIGR03878 37 SVINITGVSDTGKSLMVEQFAVTQASRGNPVLFVTVESPA 76 (259)
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHHHhCCCcEEEEEecCCc
Confidence 3466677789999999999999999999999999987543
No 183
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=33.61 E-value=61 Score=30.99 Aligned_cols=44 Identities=18% Similarity=0.188 Sum_probs=38.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVS 53 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~ 53 (443)
||||++-...-|++.-..++.+.|+++ +.+||+++.+.+.+.++
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~~ 46 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPS 46 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHHh
Confidence 489999999999999999999999994 99999999876655444
No 184
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=33.31 E-value=48 Score=29.71 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=25.2
Q ss_pred HHHHHHhCCCCCcEEEeCCCcch---HHHHHHH----hCCCceeEec
Q 044731 104 IIQWFHSHANPPVAILSDFFLGW---TLNLARE----LNIVRITFFS 143 (443)
Q Consensus 104 ~~~ll~~~~~~~D~vI~D~~~~~---~~~vA~~----lgiP~i~~~~ 143 (443)
+.+++++....||+|+.|..... ...+|.+ +|+|.|.+.=
T Consensus 83 l~~~~~~l~~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGVAK 129 (208)
T cd06559 83 LLEALEKLKTKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGVAK 129 (208)
T ss_pred HHHHHHhCCCCCCEEEEeCCccccCCCcchhheeeeecCCCEEEEEc
Confidence 55556665447999999976542 3345544 5677776643
No 185
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=33.03 E-value=94 Score=32.22 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=36.1
Q ss_pred CCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 044731 278 PDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTS 319 (443)
Q Consensus 278 ~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~ 319 (443)
+++.|||+||+....+.++.+..=.+-|+..+-.++|-...+
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~ 468 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGG 468 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 456799999999999999998887777888889999988874
No 186
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=32.90 E-value=89 Score=23.46 Aligned_cols=60 Identities=8% Similarity=0.081 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHHHHhcCchHHH--HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcccccc
Q 044731 377 DSVPDSDELGKVIGESLSQCGETK--IKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHTS 439 (443)
Q Consensus 377 ~~~~t~e~l~~ai~~vl~~~~~yr--~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~~ 439 (443)
.+.++.++|+..+.+.+.+ .+. ..-..+...++.. ...+...-++++|+..+...-+.||
T Consensus 24 ~~~Is~~El~~ll~~~~g~--~~t~~~~~~~v~~i~~~~-D~d~dG~I~f~eF~~~~~~~~~~~~ 85 (88)
T cd05030 24 PDTLYKKEFKQLVEKELPN--FLKKEKNQKAIDKIFEDL-DTNQDGQLSFEEFLVLVIKVGVAAH 85 (88)
T ss_pred cccCCHHHHHHHHHHHhhH--hhccCCCHHHHHHHHHHc-CCCCCCcCcHHHHHHHHHHHHHHhc
Confidence 4689999999999865543 232 0123444455443 3333334577888887776665554
No 187
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=32.50 E-value=42 Score=28.37 Aligned_cols=21 Identities=14% Similarity=0.117 Sum_probs=18.6
Q ss_pred HHHHHHHHhCCceEEEEeCCC
Q 044731 27 LDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 27 l~La~~L~~rGh~Vt~~t~~~ 47 (443)
..+|..|+.+||+|++++.+.
T Consensus 12 ~AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 12 TALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp HHHHHHHHHCTEEEEEETSCH
T ss_pred HHHHHHHHHcCCEEEEEeccH
Confidence 479999999999999999754
No 188
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=32.01 E-value=40 Score=29.47 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=28.5
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh
Q 044731 12 VLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV 52 (443)
Q Consensus 12 ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v 52 (443)
|++.-.++.|.+.- ..|.+.|.++|++|.++.|+.-...+
T Consensus 2 illgvtGsiaa~ka-~~lir~L~~~g~~V~vv~T~~A~~fv 41 (181)
T TIGR00421 2 IVVAMTGASGVIYG-IRLLEVLKEAGVEVHLVISDWAKETI 41 (181)
T ss_pred EEEEEECHHHHHHH-HHHHHHHHHCCCEEEEEECccHHHHH
Confidence 44444455555544 78999999999999999997654443
No 189
>TIGR02699 archaeo_AfpA archaeoflavoprotein AfpA. The prototypical member of this archaeal protein family is AF1518 from Archaeoglobus fulgidus. This homodimer with two non-covalently bound FMN cofactors can receive electrons from ferredoxin, but not from a number of other electron donors such as NADH or rubredoxin. It can then donate electrons to various reductases.
Probab=31.95 E-value=53 Score=28.51 Aligned_cols=38 Identities=11% Similarity=0.132 Sum_probs=27.4
Q ss_pred EEEEcCCCCCChHH-HHHHHHHHHh-CCceEEEEeCCCCch
Q 044731 12 VLIFPYPAQGHMLP-LLDLTHQLSL-KNLDITILITPKNLP 50 (443)
Q Consensus 12 ili~~~~~~gH~~P-~l~La~~L~~-rGh~Vt~~t~~~~~~ 50 (443)
|++.-.+ .||... ...+.++|++ +||+|.++.++.-.+
T Consensus 2 i~~gitG-sg~~l~e~v~~l~~L~~~~g~eV~vv~S~~A~~ 41 (174)
T TIGR02699 2 IAWGITG-SGDKLPETYSIMKDVKNRYGDEIDVFLSKAGEQ 41 (174)
T ss_pred EEEEEEc-cHHHHHHHHHHHHHHHHhcCCEEEEEECHhHHH
Confidence 3333333 378866 8899999985 699999999866443
No 190
>cd08806 CARD_CARD14_CARMA2 Caspase activation and recruitment domain of CARD14-like proteins. Caspase activation and recruitment domain (CARD) similar to that found in CARD14, also known as BIMP2 or CARMA2 (caspase recruitment domain-containing membrane-associated guanylate kinase protein 2). CARD14 has been identified as a novel member of the MAGUK (membrane-associated guanylate kinase) family that functions as upstream activators of BCL10 (B-cell lymphoma 10) and NF-kB signaling. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways
Probab=31.92 E-value=1.3e+02 Score=22.54 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=28.2
Q ss_pred HHHHhcCchHHHHHHHH---HHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 389 IGESLSQCGETKIKARE---LRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 389 i~~vl~~~~~yr~~a~~---l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
.++|+++ +.+..++.+ |=++++. .|. +++..|++.+.
T Consensus 36 eeeIls~-~t~~~r~~k~g~LLDIL~t----rG~--~g~~aFLeSLe 75 (86)
T cd08806 36 EEEVLHS-PRLTNRAMRVGHLLDLLKT----RGK--NGAIAFLESLK 75 (86)
T ss_pred HHHHHcc-chHHHHHHHHHHHHHHHHh----cCc--hHHHHHHHHHH
Confidence 4578888 899999999 6666653 564 48899999876
No 191
>TIGR03877 thermo_KaiC_1 KaiC domain protein, Ph0284 family. Members of this family contain a single copy of the KaiC domain (pfam06745) that occurs in two copies of the circadian clock protein kinase KaiC itself. Members occur primarily in thermophilic archaea and in Thermotoga.
Probab=31.65 E-value=3.9e+02 Score=24.14 Aligned_cols=44 Identities=11% Similarity=-0.065 Sum_probs=35.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV 52 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v 52 (443)
..-+++.-.|+.|-..-.++++.+-+++|..+.|++++...+.+
T Consensus 21 gs~~lI~G~pGsGKT~la~~~l~~~~~~ge~~lyvs~ee~~~~i 64 (237)
T TIGR03877 21 RNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGIYVALEEHPVQV 64 (237)
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEEeeCCHHHH
Confidence 34577778899999999999888877899999999988765443
No 192
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=31.03 E-value=96 Score=24.56 Aligned_cols=37 Identities=14% Similarity=-0.069 Sum_probs=32.1
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 12 VLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 12 ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
++....++..|-....-++..|.++|++|.++.....
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~~~~~ 38 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNGFEVIDLGVDVP 38 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcCCCCC
Confidence 5778888999999999999999999999999876443
No 193
>PRK13604 luxD acyl transferase; Provisional
Probab=30.92 E-value=1.2e+02 Score=28.99 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEE
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITIL 43 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~ 43 (443)
+...+++..+..++..-+..+|+.|+++|..|..+
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrf 70 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRY 70 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEe
Confidence 34577777777778777999999999999987755
No 194
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=30.72 E-value=75 Score=26.44 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=28.4
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEE
Q 044731 280 GSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVV 316 (443)
Q Consensus 280 ~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~ 316 (443)
..+|.+++||......+.++++++.+. .+.+++|..
T Consensus 51 ~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~ 86 (150)
T cd01840 51 RKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVN 86 (150)
T ss_pred CCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEE
Confidence 458999999998888899999998874 346777643
No 195
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=30.49 E-value=67 Score=23.88 Aligned_cols=62 Identities=10% Similarity=0.121 Sum_probs=35.3
Q ss_pred CCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccccc
Q 044731 376 GDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHT 438 (443)
Q Consensus 376 ~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~ 438 (443)
.++.++.+++.++++..+.....+...-..+.+.++.. ...+...-++++|+..+....+.+
T Consensus 23 ~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~-d~~~~g~I~f~eF~~~~~~~~~~~ 84 (88)
T cd00213 23 DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDL-DVNKDGKVDFQEFLVLIGKLAVAC 84 (88)
T ss_pred CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHh-ccCCCCcCcHHHHHHHHHHHHHHH
Confidence 45789999999999874432001111223344445443 233334568888888777665533
No 196
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=30.10 E-value=3.3e+02 Score=23.91 Aligned_cols=26 Identities=23% Similarity=0.180 Sum_probs=20.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLK 36 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~r 36 (443)
.+++ +-.++-||..=|+.|.+.|.++
T Consensus 39 ~~~l-VvlGSGGHT~EMlrLl~~l~~~ 64 (211)
T KOG3339|consen 39 LSTL-VVLGSGGHTGEMLRLLEALQDL 64 (211)
T ss_pred ceEE-EEEcCCCcHHHHHHHHHHHHhh
Confidence 3444 4468899999999999999775
No 197
>PLN02859 glutamine-tRNA ligase
Probab=29.64 E-value=71 Score=34.58 Aligned_cols=69 Identities=12% Similarity=0.129 Sum_probs=43.1
Q ss_pred hhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCc------hHHHHHHHHHHHHHHHH--HhcCCChHHHHHHH
Q 044731 356 FVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQC------GETKIKARELRDKALAA--VKSGGSSTRDLETL 427 (443)
Q Consensus 356 ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~------~~yr~~a~~l~~~~r~a--~~~gg~s~~~~~~~ 427 (443)
...+.+-.++ |+|+.+ |+|+++++|.+++++. ..|+.|...|-..+|.. |.++..--..+++-
T Consensus 104 ~d~~~Fek~C-GVGV~V--------T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~~Lkwad~~~~k~~id~~ 174 (788)
T PLN02859 104 FDLNKFEEAC-GVGVVV--------SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRKRLPWADPKIVKKLIDKK 174 (788)
T ss_pred cCHHHHHHhC-CCCEEE--------CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHhhCCCCCHHHHHHHHHHH
Confidence 3344444555 888776 5699999999888752 56778778887887765 23333322344444
Q ss_pred HHHHHh
Q 044731 428 VQELRK 433 (443)
Q Consensus 428 ~~~~~~ 433 (443)
+-.+.+
T Consensus 175 ~~~llg 180 (788)
T PLN02859 175 LYELLG 180 (788)
T ss_pred HHHhcC
Confidence 444443
No 198
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=29.60 E-value=93 Score=27.30 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCCceEEEEeCCCCch-hhhhhccCCCCeeEEEeC
Q 044731 24 LPLLDLTHQLSLKNLDITILITPKNLP-IVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 24 ~P~l~La~~L~~rGh~Vt~~t~~~~~~-~v~~~~~~~~~i~~~~l~ 68 (443)
.-...|+..|+++||+||++....... .... -.+++...+|
T Consensus 21 T~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~----y~gv~l~~i~ 62 (185)
T PF09314_consen 21 TFVEELAPRLVSKGIDVTVYCRSDYYPYKEFE----YNGVRLVYIP 62 (185)
T ss_pred HHHHHHHHHHhcCCceEEEEEccCCCCCCCcc----cCCeEEEEeC
Confidence 344567777778999999987654332 1111 2567777665
No 199
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=29.21 E-value=80 Score=22.91 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCceEEEEeCCC
Q 044731 25 PLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 25 P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.-+.+|..|++.|.+||++....
T Consensus 10 ig~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 10 IGIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp HHHHHHHHHHHTTSEEEEEESSS
T ss_pred HHHHHHHHHHHhCcEEEEEeccc
Confidence 34688999999999999998654
No 200
>COG1422 Predicted membrane protein [Function unknown]
Probab=28.96 E-value=2e+02 Score=25.50 Aligned_cols=41 Identities=20% Similarity=0.273 Sum_probs=27.6
Q ss_pred HHHHHHhcCc---hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 044731 387 KVIGESLSQC---GETKIKARELRDKALAAVKSGGSSTRDLETLVQ 429 (443)
Q Consensus 387 ~ai~~vl~~~---~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~ 429 (443)
..++..+.|- +++|+.++++++++++|.++|. ...++++-+
T Consensus 62 ~i~~~~liD~ekm~~~qk~m~efq~e~~eA~~~~d--~~~lkkLq~ 105 (201)
T COG1422 62 TILQKLLIDQEKMKELQKMMKEFQKEFREAQESGD--MKKLKKLQE 105 (201)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCC--HHHHHHHHH
Confidence 4455555542 7899999999999999955443 345555443
No 201
>PRK09620 hypothetical protein; Provisional
Probab=28.76 E-value=54 Score=29.83 Aligned_cols=27 Identities=19% Similarity=0.097 Sum_probs=20.3
Q ss_pred CCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 18 PAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 18 ~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
.+.|.+- ..||++|.++|++|+++...
T Consensus 26 ~SSGfiG--s~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 26 MAKGTIG--RIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred CCcCHHH--HHHHHHHHHCCCeEEEEeCC
Confidence 3444443 67899999999999999753
No 202
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase. This model describes enzymes that perform as 2-dehydropantoate 2-reductase, one of four enzymes required for the de novo biosynthesis of pantothenate (vitamin B5) from Asp and 2-oxoisovalerate. Although few members of the seed alignment are characterized experimentally, nearly all from complete genomes are found in a genome-wide (but not local) context of all three other pantothenate-biosynthetic enzymes (TIGR00222, TIGR00018, TIGR00223). The gene encoding this enzyme is designated apbA in Salmonella typhimurium and panE in Escherichia coli; this protein functions as a monomer and functions in the alternative pyrimidine biosynthetic, or APB, pathway, used to synthesize the pyrimidine moiety of thiamine. Note, synthesis of the pyrimidine moiety of thiamine occurs either via the first five steps in de novo purine biosynthesis, which uses the pur gene products, or through the APB pathway. Note that this family includes both NADH and NADPH
Probab=28.75 E-value=47 Score=31.10 Aligned_cols=19 Identities=21% Similarity=0.141 Sum_probs=16.5
Q ss_pred HHHHHHHhCCceEEEEeCC
Q 044731 28 DLTHQLSLKNLDITILITP 46 (443)
Q Consensus 28 ~La~~L~~rGh~Vt~~t~~ 46 (443)
-+|..|++.||+||++...
T Consensus 5 ~~a~~L~~~G~~V~l~~r~ 23 (293)
T TIGR00745 5 LYGAYLARAGHDVTLLARG 23 (293)
T ss_pred HHHHHHHhCCCcEEEEecH
Confidence 4788999999999999864
No 203
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=28.71 E-value=1.1e+02 Score=24.97 Aligned_cols=38 Identities=11% Similarity=0.333 Sum_probs=27.9
Q ss_pred cEEEEecCCCccCCHHHHHHHHHHHHh-C-CCceEEEEeC
Q 044731 281 SVVYACFGSQKVLSKEQMEALALGLEK-S-GIRFLWVVKT 318 (443)
Q Consensus 281 ~vVyvSfGS~~~~~~~~~~~i~~al~~-~-~~~~lw~~~~ 318 (443)
.++.++|||...-..+.+..+.+.+.+ . +.++-|.+..
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~afts 41 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFTS 41 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEecH
Confidence 589999999887555667888888764 2 4577787654
No 204
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=28.41 E-value=3.8e+02 Score=26.46 Aligned_cols=111 Identities=9% Similarity=0.075 Sum_probs=62.4
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCC-ceEEEEeCCCCch-hhhhhccCCCCeeEEEeCCCCCCCCCCCcc-cccccCCCC
Q 044731 13 LIFPYPAQGHMLPLLDLTHQLSLKN-LDITILITPKNLP-IVSSLLDARPAIQTLVLPFPSHPSVPAGVE-NVKELGNRG 89 (443)
Q Consensus 13 li~~~~~~gH~~P~l~La~~L~~rG-h~Vt~~t~~~~~~-~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~-~~~~~~~~~ 89 (443)
+++-++++=-++=|.+|.+++.+.+ .+..++.|.-..+ .+... .++...+.. +.+. ... ..
T Consensus 6 v~~I~GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~-----~le~~~i~~-------pdy~L~i~----~~ 69 (383)
T COG0381 6 VLTIFGTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQ-----VLELFGIRK-------PDYDLNIM----KP 69 (383)
T ss_pred EEEEEecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHH-----HHHHhCCCC-------CCcchhcc----cc
Confidence 4555788888999999999999987 6666666543331 22110 111111110 1110 000 00
Q ss_pred hHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCC--Ccc-hHHHHHHHhCCCceeE
Q 044731 90 NLPIMSALGKLYDPIIQWFHSHANPPVAILSDF--FLG-WTLNLARELNIVRITF 141 (443)
Q Consensus 90 ~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~--~~~-~~~~vA~~lgiP~i~~ 141 (443)
...+......+...+.+++.+. +||+|+... ... ++..+|..++||+.-+
T Consensus 70 ~~tl~~~t~~~i~~~~~vl~~~--kPD~VlVhGDT~t~lA~alaa~~~~IpV~Hv 122 (383)
T COG0381 70 GQTLGEITGNIIEGLSKVLEEE--KPDLVLVHGDTNTTLAGALAAFYLKIPVGHV 122 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhh--CCCEEEEeCCcchHHHHHHHHHHhCCceEEE
Confidence 1123333344556677888887 999988764 222 3356778889997655
No 205
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=28.40 E-value=92 Score=27.86 Aligned_cols=43 Identities=26% Similarity=0.152 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCCCCcEEEeCCCcc-----hH--HHHHHHhCCCceeEech
Q 044731 102 DPIIQWFHSHANPPVAILSDFFLG-----WT--LNLARELNIVRITFFSS 144 (443)
Q Consensus 102 ~~~~~ll~~~~~~~D~vI~D~~~~-----~~--~~vA~~lgiP~i~~~~~ 144 (443)
+.+.+++++...++|++++|.+.. +| ..++-.+++|.|.+.=.
T Consensus 77 P~~l~~l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGVAK~ 126 (206)
T PF04493_consen 77 PCILEALEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGVAKS 126 (206)
T ss_dssp HHHHHHHHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEEESS
T ss_pred HHHHHHHHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEEeCc
Confidence 455566666655899999997543 22 24566678898877443
No 206
>PRK09302 circadian clock protein KaiC; Reviewed
Probab=28.09 E-value=2.7e+02 Score=28.65 Aligned_cols=45 Identities=7% Similarity=0.048 Sum_probs=37.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhh
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVS 53 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~ 53 (443)
...+++.-.++.|-..-..+++.+.+.+|..|.|++.+...+.+.
T Consensus 273 g~~~li~G~~G~GKT~l~~~~~~~~~~~g~~~~yis~e~~~~~i~ 317 (509)
T PRK09302 273 GSIILVSGATGTGKTLLASKFAEAACRRGERCLLFAFEESRAQLI 317 (509)
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHHhCCCcEEEEEecCCHHHHH
Confidence 345677777899999999999999999999999999877655443
No 207
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=27.94 E-value=57 Score=24.62 Aligned_cols=58 Identities=12% Similarity=0.149 Sum_probs=37.5
Q ss_pred CCCCCHHHHHHHHHHH--hcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcccccc
Q 044731 377 DSVPDSDELGKVIGES--LSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHTS 439 (443)
Q Consensus 377 ~~~~t~e~l~~ai~~v--l~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~~ 439 (443)
.+.++.++|++.+++. +++ +. .-..+.+.+++. +..|...-++++|+..+....+.||
T Consensus 26 ~g~Is~~EL~~~l~~~~~lg~--k~--t~~ev~~m~~~~-D~d~dG~Idf~EFv~lm~~l~~~~~ 85 (88)
T cd05029 26 KNTLSKKELKELIQKELTIGS--KL--QDAEIAKLMEDL-DRNKDQEVNFQEYVTFLGALALIYN 85 (88)
T ss_pred CCEECHHHHHHHHHHHHhcCC--CC--CHHHHHHHHHHh-cCCCCCCCcHHHHHHHHHHHHHHHh
Confidence 3689999999999753 343 22 223566666655 4444445678888887777666555
No 208
>PF12363 DUF3647: Phage protein ; InterPro: IPR024410 Proteins in this entry are frequently annotated as phage proteins, however there is little accompanying literature to back this up or to describe the nature of these phage proteins.
Probab=27.83 E-value=1.4e+02 Score=23.74 Aligned_cols=63 Identities=14% Similarity=0.129 Sum_probs=37.1
Q ss_pred hhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 044731 357 VNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLET 426 (443)
Q Consensus 357 ~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~ 426 (443)
.|...+++.|-++..-.. ..+|.++|.++|.++.+++..+-+=...+-+.+ ++.+-....+..
T Consensus 48 ~d~~al~d~i~~a~~~~~---~~~s~~eIe~~ie~~~e~~~~~~~l~~~vl~el----~~s~~~k~~~k~ 110 (113)
T PF12363_consen 48 GDPVALADIIYAATAHEK---KRPSREEIEDYIEDIIEDEDDIEELFDEVLKEL----KKSNFFKRAVKK 110 (113)
T ss_pred CCHHHHHHHHHHHhcccC---CCCCHHHHHHHHHHHHhcchhHHHHHHHHHHHH----HhChhHHHHHHH
Confidence 444555556566766553 677999999999998776312444444444444 334544444443
No 209
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=27.49 E-value=1.4e+02 Score=25.67 Aligned_cols=30 Identities=10% Similarity=0.205 Sum_probs=22.1
Q ss_pred CCcEEEEecCCCccCCHHHHHHHHHHHHhC
Q 044731 279 DGSVVYACFGSQKVLSKEQMEALALGLEKS 308 (443)
Q Consensus 279 ~~~vVyvSfGS~~~~~~~~~~~i~~al~~~ 308 (443)
....+|+++||...-..+.+...+..|++.
T Consensus 6 ~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 6 ASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred cCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 344789999999865666777777777664
No 210
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=27.36 E-value=88 Score=31.92 Aligned_cols=39 Identities=18% Similarity=0.346 Sum_probs=31.2
Q ss_pred CcEEEEEcCCCCCChHHH------------HHHHHHHHhCCceEEEEeCCC
Q 044731 9 ATHVLIFPYPAQGHMLPL------------LDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~------------l~La~~L~~rGh~Vt~~t~~~ 47 (443)
..+|+|..-|++--+.|. ..||+++..||++||+++++.
T Consensus 256 gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~ 306 (475)
T PRK13982 256 GRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV 306 (475)
T ss_pred CCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc
Confidence 457888877887777665 478899999999999998653
No 211
>PRK04328 hypothetical protein; Provisional
Probab=27.10 E-value=4.9e+02 Score=23.80 Aligned_cols=44 Identities=11% Similarity=-0.061 Sum_probs=35.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV 52 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v 52 (443)
..-+++.-.|+.|-..-.++++.+-+++|+.+.|++++...+.+
T Consensus 23 gs~ili~G~pGsGKT~l~~~fl~~~~~~ge~~lyis~ee~~~~i 66 (249)
T PRK04328 23 RNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGVYVALEEHPVQV 66 (249)
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHHhcCCcEEEEEeeCCHHHH
Confidence 34566777789999998999888877889999999987765444
No 212
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=27.06 E-value=85 Score=29.97 Aligned_cols=40 Identities=15% Similarity=0.116 Sum_probs=31.6
Q ss_pred cEEEEEcC-CCCCChHHHHHHHHHHHhCCceEEEEeCCCCc
Q 044731 10 THVLIFPY-PAQGHMLPLLDLTHQLSLKNLDITILITPKNL 49 (443)
Q Consensus 10 ~~ili~~~-~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~ 49 (443)
+|++++.- ++-|=..--.++|.+++++|++|-+++++...
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~ 41 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAH 41 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTT
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCc
Confidence 35666664 78899999999999999999999999987653
No 213
>PRK11519 tyrosine kinase; Provisional
Probab=26.97 E-value=3.9e+02 Score=29.01 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=31.5
Q ss_pred cEEEEEc--CCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 10 THVLIFP--YPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 10 ~~ili~~--~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.++++++ .++.|=......||..|+..|+.|-++-.+..
T Consensus 526 ~kvi~vts~~~geGKTt~a~nLA~~la~~g~rvLlID~Dlr 566 (719)
T PRK11519 526 NNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMR 566 (719)
T ss_pred ceEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3455544 57889999999999999999999999876543
No 214
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=26.97 E-value=1.6e+02 Score=25.33 Aligned_cols=80 Identities=15% Similarity=0.250 Sum_probs=48.8
Q ss_pred cccccccCCCCCC-cEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHh------h
Q 044731 268 DNVSKWLDGCPDG-SVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERV------A 340 (443)
Q Consensus 268 ~~l~~wLd~~~~~-~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~------~ 340 (443)
+++.+|++.-... --++| +++.++..+... ...++.+|||...++ .+.+|...+ +
T Consensus 49 pe~~~W~~e~k~~gi~v~v----vSNn~e~RV~~~---~~~l~v~fi~~A~KP-----------~~~~fr~Al~~m~l~~ 110 (175)
T COG2179 49 PELRAWLAELKEAGIKVVV----VSNNKESRVARA---AEKLGVPFIYRAKKP-----------FGRAFRRALKEMNLPP 110 (175)
T ss_pred HHHHHHHHHHHhcCCEEEE----EeCCCHHHHHhh---hhhcCCceeecccCc-----------cHHHHHHHHHHcCCCh
Confidence 7889998764322 23333 234455444444 445689999977654 455554332 2
Q ss_pred cCceEeecCCCcccchhhHHHHHhhcceeEE
Q 044731 341 GRGLVLKGWVPQADQFVNARLLVDDLRVAVL 371 (443)
Q Consensus 341 ~~~~vv~~W~PQ~DQ~~na~~v~~~~g~G~~ 371 (443)
.+.+++ |||-+.--+-....|+=.-
T Consensus 111 ~~vvmV------GDqL~TDVlggnr~G~~tI 135 (175)
T COG2179 111 EEVVMV------GDQLFTDVLGGNRAGMRTI 135 (175)
T ss_pred hHEEEE------cchhhhhhhcccccCcEEE
Confidence 455666 9999998777666666533
No 215
>PRK05920 aromatic acid decarboxylase; Validated
Probab=26.76 E-value=76 Score=28.35 Aligned_cols=42 Identities=10% Similarity=0.141 Sum_probs=31.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV 52 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v 52 (443)
.||++.-.++. ...=...+.+.|.+.||+|+++.|..-.+.+
T Consensus 4 krIllgITGsi-aa~ka~~lvr~L~~~g~~V~vi~T~~A~~fv 45 (204)
T PRK05920 4 KRIVLAITGAS-GAIYGVRLLECLLAADYEVHLVISKAAQKVL 45 (204)
T ss_pred CEEEEEEeCHH-HHHHHHHHHHHHHHCCCEEEEEEChhHHHHH
Confidence 46776655544 4467889999999999999999987644434
No 216
>smart00526 H15 Domain in histone families 1 and 5.
Probab=26.69 E-value=99 Score=21.68 Aligned_cols=16 Identities=19% Similarity=0.412 Sum_probs=12.2
Q ss_pred hcCCChHHHHHHHHHH
Q 044731 415 KSGGSSTRDLETLVQE 430 (443)
Q Consensus 415 ~~gg~s~~~~~~~~~~ 430 (443)
+.+|+|...+.+|++.
T Consensus 20 er~GsS~~aI~kyi~~ 35 (66)
T smart00526 20 ERKGSSLQAIKKYIEA 35 (66)
T ss_pred CCCCCCHHHHHHHHHH
Confidence 4578888888888875
No 217
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=26.63 E-value=1.5e+02 Score=24.45 Aligned_cols=56 Identities=7% Similarity=0.083 Sum_probs=41.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh-hhhccCCCCeeEEEe
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV-SSLLDARPAIQTLVL 67 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v-~~~~~~~~~i~~~~l 67 (443)
.+|++.+..+-+|-.=---++..|...|++|..+...-..+.+ +.... .+..++.+
T Consensus 2 ~~vvigtv~~D~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~--~~adiVgl 58 (134)
T TIGR01501 2 KTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIE--TKADAILV 58 (134)
T ss_pred CeEEEEEecCChhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH--cCCCEEEE
Confidence 4799999999999999988999999999999998875544333 22222 34555544
No 218
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=26.59 E-value=4.1e+02 Score=22.69 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=57.5
Q ss_pred EcCCCCCChH-HHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHH
Q 044731 15 FPYPAQGHML-PLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPI 93 (443)
Q Consensus 15 ~~~~~~gH~~-P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (443)
+.+...+... -+..+|.+|..+|+.|.=+........-.. ...+....++... .++ ..+...... ...+.-
T Consensus 4 v~~~~~~~~d~lL~~~a~~L~~~G~rv~G~vQ~~~~~~~~~----~~~m~l~dl~~G~--~~~-IsQ~LG~gs-~gCrLD 75 (159)
T PF10649_consen 4 VVYDDGGDIDALLAAFAARLRARGVRVAGLVQRNTADGDGG----RCDMDLRDLPSGR--RIR-ISQDLGPGS-RGCRLD 75 (159)
T ss_pred EEcCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCC----ccceEEEECCCCC--EEE-EeeccCCCC-cccccC
Confidence 3344444444 355789999999999987765331111000 1345555443110 000 001100000 111111
Q ss_pred HHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcc---------hHHHHHHHhCCCceeEechh
Q 044731 94 MSALGKLYDPIIQWFHSHANPPVAILSDFFLG---------WTLNLARELNIVRITFFSSG 145 (443)
Q Consensus 94 ~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~---------~~~~vA~~lgiP~i~~~~~~ 145 (443)
...+......++..+++ .+|++|..-|.- ....-|-..|||+++..+..
T Consensus 76 ~~~La~A~~~l~~al~~---~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~~ 133 (159)
T PF10649_consen 76 PGALAEASAALRRALAE---GADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPPR 133 (159)
T ss_pred HHHHHHHHHHHHHHHhc---CCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECHH
Confidence 12223334445555555 699999986642 11233455699988766553
No 219
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=26.40 E-value=3.1e+02 Score=26.28 Aligned_cols=39 Identities=13% Similarity=-0.159 Sum_probs=25.7
Q ss_pred hHHHHHHHHhCCCCCcEEEeCCCc--c-hHHHHHHHhCCCceeE
Q 044731 101 YDPIIQWFHSHANPPVAILSDFFL--G-WTLNLARELNIVRITF 141 (443)
Q Consensus 101 ~~~~~~ll~~~~~~~D~vI~D~~~--~-~~~~vA~~lgiP~i~~ 141 (443)
...+.+.+.+. +||+|++.... . ++..+|..+|+|++.+
T Consensus 77 ~~~l~~~l~~~--~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~ 118 (363)
T cd03786 77 LIGLEAVLLEE--KPDLVLVLGDTNETLAAALAAFKLGIPVAHV 118 (363)
T ss_pred HHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHcCCCEEEE
Confidence 34455566666 89999887422 2 2446777889997753
No 220
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=26.33 E-value=91 Score=30.41 Aligned_cols=69 Identities=23% Similarity=0.220 Sum_probs=40.7
Q ss_pred ccchhhHHHHHhh--cceeEEe-e----c-----CCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCCh
Q 044731 353 ADQFVNARLLVDD--LRVAVLV-C----E-----GGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSS 420 (443)
Q Consensus 353 ~DQ~~na~~v~~~--~g~G~~l-~----~-----~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s 420 (443)
.=|+.||+++++. .|+.--+ + . --++..|++.|.+++.+ ... .++++...++++.+ ++ |++
T Consensus 265 ~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~-~~~-~~~~~~~~~l~~~l----~~-~a~ 337 (347)
T PRK14089 265 AIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE-MDR-EKFFKKSKELREYL----KH-GSA 337 (347)
T ss_pred HHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH-HHH-HHHHHHHHHHHHHh----cC-CHH
Confidence 4688899998821 1443222 1 0 01467899999999987 233 45666666665555 33 556
Q ss_pred HHHHHHHH
Q 044731 421 TRDLETLV 428 (443)
Q Consensus 421 ~~~~~~~~ 428 (443)
.+..+.++
T Consensus 338 ~~~A~~i~ 345 (347)
T PRK14089 338 KNVAKILK 345 (347)
T ss_pred HHHHHHHh
Confidence 55554443
No 221
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=26.08 E-value=1.3e+02 Score=29.11 Aligned_cols=44 Identities=11% Similarity=0.129 Sum_probs=30.6
Q ss_pred hhhhHHHHHHHHhCCCCCcEEEeCCCcch-------H---HHHHHHhCCCceeEec
Q 044731 98 GKLYDPIIQWFHSHANPPVAILSDFFLGW-------T---LNLARELNIVRITFFS 143 (443)
Q Consensus 98 ~~~~~~~~~ll~~~~~~~D~vI~D~~~~~-------~---~~vA~~lgiP~i~~~~ 143 (443)
+.....+.++++.. +||++|+-+.+.. + ..+.++++||+++--.
T Consensus 66 eea~~~i~~mv~~~--~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM~ 119 (349)
T PF07355_consen 66 EEALKKILEMVKKL--KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAMY 119 (349)
T ss_pred HHHHHHHHHHHHhc--CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEec
Confidence 44556667778888 9999999975532 2 1245689999887533
No 222
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=25.92 E-value=1.9e+02 Score=27.30 Aligned_cols=40 Identities=15% Similarity=0.175 Sum_probs=33.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
++.-|+++-..+.|-...+..|-.+|++++-...+++-++
T Consensus 18 ~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDP 57 (366)
T KOG1532|consen 18 RPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDP 57 (366)
T ss_pred CCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCH
Confidence 3456777778899999999999999999998888887654
No 223
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=25.77 E-value=1.1e+02 Score=25.75 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=24.7
Q ss_pred cCCCCCChHHHHHHHHHHHhCCceEEEE
Q 044731 16 PYPAQGHMLPLLDLTHQLSLKNLDITIL 43 (443)
Q Consensus 16 ~~~~~gH~~P~l~La~~L~~rGh~Vt~~ 43 (443)
+-++.|-..-.+.|++.|+++|.+|.++
T Consensus 5 t~~~~GKT~va~~L~~~l~~~g~~V~~~ 32 (166)
T TIGR00347 5 TDTGVGKTVASSALAAKLKKAGYSVGYY 32 (166)
T ss_pred CCCCccHHHHHHHHHHHHHHCCCcEEEE
Confidence 4467788899999999999999999886
No 224
>KOG2368 consensus Hydroxymethylglutaryl-CoA lyase [Energy production and conversion; Amino acid transport and metabolism]
Probab=25.36 E-value=1.9e+02 Score=26.22 Aligned_cols=49 Identities=24% Similarity=0.253 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-ccchhhHHHHHhhcce
Q 044731 294 SKEQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-ADQFVNARLLVDDLRV 368 (443)
Q Consensus 294 ~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-~DQ~~na~~v~~~~g~ 368 (443)
+.+...++++-|.+.+-+++=.. . .+.-+|+|| +|.....+.+.+.=|+
T Consensus 38 pt~vKveLI~~Lse~Gl~~vEtT-----------------S---------FVSpKWVPQl~D~~ev~k~i~~~~Gv 87 (316)
T KOG2368|consen 38 PTEVKVELIDRLSECGLQVVETT-----------------S---------FVSPKWVPQLADHNEVMKGIRKFPGV 87 (316)
T ss_pred CchHHHHHHHHHHHcCCceeeee-----------------c---------ccCccccccccchHHHHHhhhcCCCc
Confidence 44556678888888887755211 1 133499999 8887777766544333
No 225
>PLN00016 RNA-binding protein; Provisional
Probab=25.23 E-value=93 Score=30.55 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
+.+|+|+...+-|+=.--..|+++|.++||+|+.++..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 45677762222222223467889999999999998853
No 226
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=24.90 E-value=4.6e+02 Score=25.79 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=25.7
Q ss_pred CcEEEEEc-CCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 9 ATHVLIFP-YPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 9 ~~~ili~~-~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
..+|+|+= .+..|. .+|+.|.++||+|+++...
T Consensus 98 ~~~I~IiGG~GlmG~-----slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 98 LRPVVIVGGKGQLGR-----LFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred cceEEEEcCCChhhH-----HHHHHHHHCCCeEEEeCCC
Confidence 35788875 666664 6899999999999998753
No 227
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=24.88 E-value=76 Score=28.86 Aligned_cols=30 Identities=10% Similarity=0.123 Sum_probs=20.9
Q ss_pred EEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 14 IFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 14 i~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
+++..+.|-+ =.+||++|+++||+|+++..
T Consensus 19 ~itN~SSG~i--G~aLA~~L~~~G~~V~li~r 48 (229)
T PRK06732 19 GITNHSTGQL--GKIIAETFLAAGHEVTLVTT 48 (229)
T ss_pred eecCccchHH--HHHHHHHHHhCCCEEEEEEC
Confidence 3444444432 25788999999999999874
No 228
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=24.59 E-value=86 Score=30.49 Aligned_cols=44 Identities=20% Similarity=0.269 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 044731 381 DSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQ 429 (443)
Q Consensus 381 t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~ 429 (443)
+.++|.++|.+++.+ +..+++..+-...+ ++|+++.+-++.+.+
T Consensus 320 d~~~i~~ai~~ll~~-~~~~~~~~~~~~~~----g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 320 DKENITKAAKRLLTD-PDEYKKMSNASNPY----GDGEASERIVEELLN 363 (365)
T ss_pred CHHHHHHHHHHHHhC-hHHHHHhhhcCCCC----cCchHHHHHHHHHHh
Confidence 789999999999988 67776654333222 457776655554443
No 229
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=24.55 E-value=42 Score=22.21 Aligned_cols=51 Identities=10% Similarity=0.231 Sum_probs=29.5
Q ss_pred CCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 377 DSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 377 ~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
++.++.++++.++ +.++- +. -...++..+++.. ...+...-++++|+..+.
T Consensus 2 ~G~i~~~~~~~~l-~~~g~-~~--~s~~e~~~l~~~~-D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRAL-SKLGI-KD--LSEEEVDRLFREF-DTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHH-HHTTS-SS--SCHHHHHHHHHHH-TTSSSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHH-HHhCC-CC--CCHHHHHHHHHhc-ccCCCCCCCHHHHHHHHH
Confidence 4678999999999 54432 11 2233355555543 333333446777776554
No 230
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=24.09 E-value=1.8e+02 Score=23.19 Aligned_cols=37 Identities=14% Similarity=0.004 Sum_probs=32.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
||++.--++.|=......+++.|+++|.+|.++..+.
T Consensus 1 ~i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~D~ 37 (116)
T cd02034 1 KIAITGKGGVGKTTIAALLARYLAEKGKPVLAIDADP 37 (116)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECCc
Confidence 4777888899999999999999999999999888765
No 231
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=23.97 E-value=1.1e+02 Score=28.77 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=23.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
++|+|+=.++.| ..+|..|++.||+|+++..
T Consensus 1 mkI~IiG~G~iG-----~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGAGAVG-----GTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECCCHHH-----HHHHHHHHHCCCceEEEec
Confidence 356666555544 4578899999999999986
No 232
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=23.96 E-value=81 Score=27.66 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=32.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHh-CCceEEEEeCCCCchhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSL-KNLDITILITPKNLPIVS 53 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~-rGh~Vt~~t~~~~~~~v~ 53 (443)
.+|++.-.++-| ..=...|+++|.+ .||+|.++.|+.-.+.+.
T Consensus 2 k~IllgVTGsia-a~ka~~l~~~L~k~~g~~V~vv~T~~A~~fv~ 45 (185)
T PRK06029 2 KRLIVGISGASG-AIYGVRLLQVLRDVGEIETHLVISQAARQTLA 45 (185)
T ss_pred CEEEEEEECHHH-HHHHHHHHHHHHhhcCCeEEEEECHHHHHHHH
Confidence 367777777766 5558899999999 599999999976544443
No 233
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=23.95 E-value=2.5e+02 Score=22.19 Aligned_cols=32 Identities=13% Similarity=0.250 Sum_probs=27.1
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEeCCCCch
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILITPKNLP 50 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~ 50 (443)
..|+...+..+++.+.++|..|..+|......
T Consensus 62 ~sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~ 93 (131)
T PF01380_consen 62 YSGETRELIELLRFAKERGAPVILITSNSESP 93 (131)
T ss_dssp SSSTTHHHHHHHHHHHHTTSEEEEEESSTTSH
T ss_pred ccccchhhhhhhHHHHhcCCeEEEEeCCCCCc
Confidence 67888999999999999999998888755443
No 234
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=23.49 E-value=93 Score=28.96 Aligned_cols=44 Identities=20% Similarity=0.328 Sum_probs=37.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSS 54 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~ 54 (443)
+||++-..+-|++.-++++.++|+++ +-+|++++.....+.++.
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~ 46 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLEL 46 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhc
Confidence 58889999999999999999999995 489999998776655554
No 235
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=23.45 E-value=93 Score=29.70 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+++|+|+=.++.| ..+|..|++.||+|+++....
T Consensus 5 ~m~I~IiG~GaiG-----~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 5 TPRIGIIGTGAIG-----GFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCC
Confidence 4689998777666 457888999999999998644
No 236
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=23.31 E-value=1.5e+02 Score=26.89 Aligned_cols=38 Identities=5% Similarity=0.110 Sum_probs=31.7
Q ss_pred cEEEEEcC--CCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPY--PAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~--~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.++.+++. ++-|-..-...|+-.||.+|+.|.++-.+-
T Consensus 2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~Di 41 (272)
T COG2894 2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDI 41 (272)
T ss_pred ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCc
Confidence 35667776 578999999999999999999999987653
No 237
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=23.28 E-value=2.8e+02 Score=25.62 Aligned_cols=60 Identities=18% Similarity=0.276 Sum_probs=44.7
Q ss_pred ceeEEeecCCCCCCCHHHHHHHHHHHhcCc------hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 044731 367 RVAVLVCEGGDSVPDSDELGKVIGESLSQC------GETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLR 435 (443)
Q Consensus 367 g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~------~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~ 435 (443)
..|+++.. ..++.++--+.|+..+... +.++++|.+++. ..||.|-+.+.-|+..+.+.+
T Consensus 184 RFGL~l~F---~~~~q~~YL~IV~~~~~~~g~~~~~e~l~~~Al~wa~------~rg~RSGRtA~QF~~~l~g~~ 249 (249)
T PF05673_consen 184 RFGLWLSF---YPPDQEEYLAIVRHYAERYGLELDEEELRQEALQWAL------RRGGRSGRTARQFIDDLAGRQ 249 (249)
T ss_pred hCCcEEEe---cCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH------HcCCCCHHHHHHHHHHHhcCC
Confidence 46777776 6789999999998887411 466666666543 569999999999999887653
No 238
>cd08807 CARD_CARD10_CARMA3 Caspase activation and recruitment domain of CARD10-like proteins. Caspase activation and recruitment domain (CARD) similar to that found in CARD10, also known as CARMA3 (caspase recruitment domain-containing membrane-associated guanylate kinase protein 3) or BIMP1. The CARMA3-BCL10-MALT1 signalosome plays a role in the GPCR-induced NF-kB activation. CARMA3 is more widely expressed than CARMA1, which is found only in hematopoietic cells. In endothelial and smooth muscle cells, CARMA3-mediated NF-kB activation induces pro-inflammatory signals within the vasculature and is a key factor in atherogenesis. In bronchial epithelial cells, CARMA3-mediated NF-kB signaling is important for the development of allergic airway inflammation. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains fo
Probab=23.26 E-value=2.1e+02 Score=21.38 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=28.5
Q ss_pred HHHHhcCchH---HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 389 IGESLSQCGE---TKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 389 i~~vl~~~~~---yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
.++|+++ +. -++++.+|=++++. .|. +++..|++.+.
T Consensus 36 eEEI~~~-~~~~~~~~k~~~LLDIL~t----rG~--~gf~aFLeSLE 75 (86)
T cd08807 36 EEEVLNS-YRFPCRINRTGRLMDILRG----RGK--RGYEAFLEALE 75 (86)
T ss_pred HHHHHhc-cchhhHHHHHHHHHHHHHh----cCc--hHHHHHHHHHH
Confidence 4566776 55 88899999999974 565 58999999886
No 239
>COG1578 Uncharacterized conserved protein [Function unknown]
Probab=23.23 E-value=3.3e+02 Score=25.45 Aligned_cols=53 Identities=28% Similarity=0.252 Sum_probs=33.1
Q ss_pred HHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHhc--------------------------CCChHHHHHHHHHHHHhc
Q 044731 384 ELGKVIGESLSQC---GETKIKARELRDKALAAVKS--------------------------GGSSTRDLETLVQELRKL 434 (443)
Q Consensus 384 ~l~~ai~~vl~~~---~~yr~~a~~l~~~~r~a~~~--------------------------gg~s~~~~~~~~~~~~~~ 434 (443)
.+-+-|.++++++ +.|++++.+++..+...+++ +|.|..++++.++++...
T Consensus 56 ~ihr~v~k~~g~eDPyke~K~r~NeiA~~vl~~vr~~~~~~~~dl~~Avk~ai~GN~iDfgv~G~~~~~lee~~~~~~~~ 135 (285)
T COG1578 56 LIHREVYKILGNEDPYKEYKRRANEIALKVLPKVRENIEDTPEDLKTAVKLAIVGNVIDFGVLGFSPFDLEEEVEKLLDA 135 (285)
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcceeeccccCCHhHHHHHHHHhhcC
Confidence 3445566666654 66777766666655544433 356777777777777666
Q ss_pred cc
Q 044731 435 RF 436 (443)
Q Consensus 435 ~~ 436 (443)
..
T Consensus 136 ~l 137 (285)
T COG1578 136 EL 137 (285)
T ss_pred cc
Confidence 54
No 240
>PRK03094 hypothetical protein; Provisional
Probab=23.18 E-value=75 Score=23.61 Aligned_cols=20 Identities=25% Similarity=0.390 Sum_probs=16.7
Q ss_pred HHHHHHHHHhCCceEEEEeC
Q 044731 26 LLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 26 ~l~La~~L~~rGh~Vt~~t~ 45 (443)
+..+.++|.++||+|.=+.+
T Consensus 10 Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 10 LTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred cHHHHHHHHHCCCEEEecCc
Confidence 46789999999999987654
No 241
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=23.01 E-value=64 Score=29.55 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=23.8
Q ss_pred CCcEE-EeCCCcc-hHHHHHHHhCCCceeEechhH
Q 044731 114 PPVAI-LSDFFLG-WTLNLARELNIVRITFFSSGS 146 (443)
Q Consensus 114 ~~D~v-I~D~~~~-~~~~vA~~lgiP~i~~~~~~~ 146 (443)
-||++ |.|...- -+..=|.++|||+|.+.-+.+
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~ 190 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNC 190 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCC
Confidence 48866 6676443 455678899999998876654
No 242
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=22.95 E-value=1.1e+02 Score=27.42 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=28.9
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 12 VLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 12 ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
|++.-+|+.|-..-.-.||++|.+++|+|.-++.
T Consensus 4 iIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 4 IILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred EEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 4455589999999999999999999999876654
No 243
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=22.81 E-value=1.2e+02 Score=28.34 Aligned_cols=39 Identities=10% Similarity=0.273 Sum_probs=24.0
Q ss_pred cEEEEecCCCccCCHH-HHHHHHHHHHh--CCCceEEEEeCC
Q 044731 281 SVVYACFGSQKVLSKE-QMEALALGLEK--SGIRFLWVVKTS 319 (443)
Q Consensus 281 ~vVyvSfGS~~~~~~~-~~~~i~~al~~--~~~~~lw~~~~~ 319 (443)
.++.+||||...-..+ -+..+-+.+++ .+.+|-|.+.+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 4889999998754443 66667766666 367899998764
No 244
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=22.79 E-value=87 Score=31.15 Aligned_cols=36 Identities=22% Similarity=0.368 Sum_probs=27.5
Q ss_pred cEEEEEcCC-C--CCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 10 THVLIFPYP-A--QGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 10 ~~ili~~~~-~--~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
.-+.+=|.+ + -||+.|+..| +.|.+.||+|+++...
T Consensus 35 ~Y~GfDPTa~slHlGhlv~l~kL-~~fQ~aGh~~ivLigd 73 (401)
T COG0162 35 VYIGFDPTAPSLHLGHLVPLMKL-RRFQDAGHKPIVLIGD 73 (401)
T ss_pred EEEeeCCCCCccchhhHHHHHHH-HHHHHCCCeEEEEecc
Confidence 446666655 2 4999998877 5789999999999864
No 245
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=22.66 E-value=2.1e+02 Score=22.88 Aligned_cols=33 Identities=9% Similarity=0.033 Sum_probs=25.3
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 13 LIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 13 li~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
+++..+..+.-.-+..+++.|+++|+.|..+..
T Consensus 2 vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~ 34 (145)
T PF12695_consen 2 VVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDY 34 (145)
T ss_dssp EEEECTTTTTTHHHHHHHHHHHHTTEEEEEESC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 445555556677799999999999998887743
No 246
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family. This model describes one of two paralogous families of archaealflavoprotein. The other, described by TIGR02699 and typified by the partially characterized AF1518 of Archaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown.
Probab=22.51 E-value=1.1e+02 Score=28.00 Aligned_cols=34 Identities=12% Similarity=0.380 Sum_probs=25.9
Q ss_pred CCCCCh-HHHHHHHHHHHhC--CceEEEEeCCCCchh
Q 044731 18 PAQGHM-LPLLDLTHQLSLK--NLDITILITPKNLPI 51 (443)
Q Consensus 18 ~~~gH~-~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~ 51 (443)
.+.|+. .=...|.+.|.++ ||+|.++.++.-.+.
T Consensus 7 tGs~~~~~~~~~l~~~L~~~~~g~~V~vv~T~~a~~~ 43 (234)
T TIGR02700 7 TGAGHLLVESFQVMKELKREIEELRVSTFVSRAGEEV 43 (234)
T ss_pred eCccHhHHHHHHHHHHHHhhcCCCeEEEEEChhHHhH
Confidence 344455 6788999999999 999999998654333
No 247
>PRK06849 hypothetical protein; Provisional
Probab=22.28 E-value=1.7e+02 Score=28.92 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+++|||.- +-...-+++++.|.++||+|+++....
T Consensus 4 ~~~VLI~G----~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 4 KKTVLITG----ARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCEEEEeC----CCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 45677763 222357899999999999999987754
No 248
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=22.22 E-value=2.4e+02 Score=20.85 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=27.3
Q ss_pred cEEEEEcCCCC--CChHHHHHHHHHHHhCCceEEEEe
Q 044731 10 THVLIFPYPAQ--GHMLPLLDLTHQLSLKNLDITILI 44 (443)
Q Consensus 10 ~~ili~~~~~~--gH~~P~l~La~~L~~rGh~Vt~~t 44 (443)
.+++++|.... .+..-...++..|.+.|..|.+-.
T Consensus 2 ~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~ 38 (94)
T cd00861 2 FDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDD 38 (94)
T ss_pred eEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 36888887653 466778889999999999998754
No 249
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=22.21 E-value=4.6e+02 Score=21.78 Aligned_cols=97 Identities=13% Similarity=0.031 Sum_probs=59.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhhhccCCC-CeeEEEeCCCCCCCCCCCcccccccC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSSLLDARP-AIQTLVLPFPSHPSVPAGVENVKELG 86 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~~~~~~~-~i~~~~l~~~~~~~~~~~~~~~~~~~ 86 (443)
+.|++.. ..++-.-++.+++.|.+. ||++ +.|....+.+.. . |+.+..+-. + +.+
T Consensus 5 ~~v~lsv--~d~dK~~l~~~a~~l~~ll~Gf~l--~AT~gTa~~L~~-----~~Gi~v~~vi~----~-~~g-------- 62 (142)
T PRK05234 5 KRIALIA--HDHKKDDLVAWVKAHKDLLEQHEL--YATGTTGGLIQE-----ATGLDVTRLLS----G-PLG-------- 62 (142)
T ss_pred cEEEEEE--eccchHHHHHHHHHHHHHhcCCEE--EEeChHHHHHHh-----ccCCeeEEEEc----C-CCC--------
Confidence 4455544 566778899999999998 9995 455565655554 3 666554310 0 110
Q ss_pred CCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEe--CCCcc-----hH---HHHHHHhCCCceeEec
Q 044731 87 NRGNLPIMSALGKLYDPIIQWFHSHANPPVAILS--DFFLG-----WT---LNLARELNIVRITFFS 143 (443)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~--D~~~~-----~~---~~vA~~lgiP~i~~~~ 143 (443)
-.+.+.+++.+. ++|+||. |.... .+ ...|-.+|||+++-..
T Consensus 63 -------------g~~~i~~~I~~g--~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 63 -------------GDQQIGALIAEG--KIDMLIFFRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred -------------CchhHHHHHHcC--ceeEEEEecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 012344566666 8999988 42221 12 3578889999876433
No 250
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=22.18 E-value=2.1e+02 Score=27.21 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
++++|.|+=.+..| ..+|+.|++.||+|+++...
T Consensus 3 ~~m~I~iiG~G~~G-----~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILGAGAWG-----STLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 45678888665555 57899999999999998754
No 251
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=22.05 E-value=69 Score=27.83 Aligned_cols=37 Identities=27% Similarity=0.312 Sum_probs=27.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
+|++.-.++. ...-...+.+.|.++|++|.++.|+.-
T Consensus 2 ~I~lgvtGs~-~a~~~~~ll~~L~~~g~~V~vi~T~~A 38 (177)
T TIGR02113 2 KILLAVTGSI-AAYKAADLTSQLTKLGYDVTVLMTQAA 38 (177)
T ss_pred EEEEEEcCHH-HHHHHHHHHHHHHHCCCEEEEEEChHH
Confidence 4555555544 455666999999999999999998653
No 252
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=21.79 E-value=80 Score=23.49 Aligned_cols=23 Identities=17% Similarity=0.205 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhCCceEEEEeCCC
Q 044731 25 PLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 25 P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.+..+.++|.++||+|+-+....
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~~~ 31 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLENEQ 31 (80)
T ss_pred CchHHHHHHHHCCCEEEecCCcc
Confidence 35678999999999999877544
No 253
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=21.67 E-value=2.1e+02 Score=24.44 Aligned_cols=42 Identities=7% Similarity=0.105 Sum_probs=27.4
Q ss_pred CCCChHHHHHHHHHHHhCCceEEEEeCCC-CchhhhhhccCCCCeeEEEeC
Q 044731 19 AQGHMLPLLDLTHQLSLKNLDITILITPK-NLPIVSSLLDARPAIQTLVLP 68 (443)
Q Consensus 19 ~~gH~~P~l~La~~L~~rGh~Vt~~t~~~-~~~~v~~~~~~~~~i~~~~l~ 68 (443)
+-|++. .|+.+|.++|.+|+.+..+. ....+.+..+ +|+.+.
T Consensus 114 gD~DF~---~Lv~~lre~G~~V~v~g~~~~ts~~L~~acd-----~FI~L~ 156 (160)
T TIGR00288 114 RDADFL---PVINKAKENGKETIVIGAEPGFSTALQNSAD-----IAIILG 156 (160)
T ss_pred ccHhHH---HHHHHHHHCCCEEEEEeCCCCChHHHHHhcC-----eEEeCC
Confidence 556655 56788889999999999654 3334444322 566553
No 254
>PRK04940 hypothetical protein; Provisional
Probab=21.61 E-value=2.4e+02 Score=24.57 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=24.4
Q ss_pred CCcEEEeCCCcc-hHHHHHHHhCCCceeEechh
Q 044731 114 PPVAILSDFFLG-WTLNLARELNIVRITFFSSG 145 (443)
Q Consensus 114 ~~D~vI~D~~~~-~~~~vA~~lgiP~i~~~~~~ 145 (443)
+++++|-.++.. |+.-+|+++|+|.|.+.|+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCC
Confidence 356666665444 77889999999999998864
No 255
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=21.54 E-value=87 Score=25.88 Aligned_cols=20 Identities=15% Similarity=0.195 Sum_probs=17.3
Q ss_pred HHHHHHHhCCceEEEEeCCC
Q 044731 28 DLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 28 ~La~~L~~rGh~Vt~~t~~~ 47 (443)
-+|..|++.||+|++++...
T Consensus 12 ~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 12 LYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp HHHHHHHHTTCEEEEEESHH
T ss_pred HHHHHHHHCCCceEEEEccc
Confidence 47889999999999999755
No 256
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=21.48 E-value=2e+02 Score=25.16 Aligned_cols=45 Identities=11% Similarity=0.133 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCCCCcEEEeCCCcc-hHHHHHHHhCCCceeEechhH
Q 044731 102 DPIIQWFHSHANPPVAILSDFFLG-WTLNLARELNIVRITFFSSGS 146 (443)
Q Consensus 102 ~~~~~ll~~~~~~~D~vI~D~~~~-~~~~vA~~lgiP~i~~~~~~~ 146 (443)
..+++++++......++|-.++.. ++..+|+++|+|.|.+.|+..
T Consensus 47 ~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav~ 92 (187)
T PF05728_consen 47 AQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLINPAVR 92 (187)
T ss_pred HHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCCC
Confidence 345566666521223555555444 566899999999998877653
No 257
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=21.34 E-value=2.7e+02 Score=25.43 Aligned_cols=33 Identities=15% Similarity=0.323 Sum_probs=30.4
Q ss_pred CCCCChHHHHHHHHHHHhCCceEEEEeCCCCch
Q 044731 18 PAQGHMLPLLDLTHQLSLKNLDITILITPKNLP 50 (443)
Q Consensus 18 ~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~ 50 (443)
++.|=..-.+.||.+|+++|-.|+++=.+++.+
T Consensus 11 GGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~p 43 (231)
T PF07015_consen 11 GGAGKTTAAMALASELAARGARVALIDADPNQP 43 (231)
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCc
Confidence 789999999999999999999999999888754
No 258
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=21.26 E-value=1.8e+02 Score=26.60 Aligned_cols=37 Identities=11% Similarity=0.145 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
.++|+++...--==..-+-.....|+++||+|++++-
T Consensus 10 ~~~vL~v~aHPDDe~~g~ggtla~~~~~G~~V~v~~l 46 (237)
T COG2120 10 PLRVLVVFAHPDDEEIGCGGTLAKLAARGVEVTVVCL 46 (237)
T ss_pred CCcEEEEecCCcchhhccHHHHHHHHHCCCeEEEEEc
Confidence 4566665443222223455666777999999999884
No 259
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine biosynthesis pathway protein ATIC (purH). The bifunctional ATIC protein contains a C-terminal ATIC formylase domain that formylates 5-aminoimidazole-4-carboxamide-ribonucleotide. The IMPCH domain then converts the formyl-5-aminoimidazole-4-carboxamide-ribonucleotide to inosine monophosphate. This is the final step in de novo purine production.
Probab=21.25 E-value=4.2e+02 Score=23.28 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEe
Q 044731 24 LPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVL 67 (443)
Q Consensus 24 ~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l 67 (443)
.=+..+|+.|.+.|+++ +.|....+.++. .|+.+..+
T Consensus 11 ~~l~~lAk~L~~lGf~I--~AT~GTAk~L~e-----~GI~v~~V 47 (187)
T cd01421 11 TGLVEFAKELVELGVEI--LSTGGTAKFLKE-----AGIPVTDV 47 (187)
T ss_pred ccHHHHHHHHHHCCCEE--EEccHHHHHHHH-----cCCeEEEh
Confidence 44678999999999997 355555666655 67776655
No 260
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=21.04 E-value=1.9e+02 Score=25.74 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=25.0
Q ss_pred CCCCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 1 MSSCSNSRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 1 ~~~~~~~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
|++|. ..+++| .++.|++ =..|++.|.++||+|++++.
T Consensus 1 ~~~~~---~~~vlI--tGasg~i--G~~l~~~l~~~g~~v~~~~~ 38 (249)
T PRK12825 1 MGSLM---GRVALV--TGAARGL--GRAIALRLARAGADVVVHYR 38 (249)
T ss_pred CCCCC---CCEEEE--eCCCchH--HHHHHHHHHHCCCeEEEEeC
Confidence 55554 234555 4455653 46788999999999877554
No 261
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=20.92 E-value=1.4e+02 Score=22.49 Aligned_cols=58 Identities=14% Similarity=0.150 Sum_probs=34.9
Q ss_pred CC-CCCHHHHHHHHHH----HhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcccccc
Q 044731 377 DS-VPDSDELGKVIGE----SLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHTS 439 (443)
Q Consensus 377 ~~-~~t~e~l~~ai~~----vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~~ 439 (443)
++ .++.++|+..++. .+.. .. .-..+.+.++++ ...|....++++|+..+...-+-||
T Consensus 23 dG~~I~~~eL~~ll~~~~~~~lg~-~~---~~~~v~~~i~~~-D~n~dG~v~f~eF~~li~~~~~~~~ 85 (88)
T cd05027 23 DKHKLKKSELKELINNELSHFLEE-IK---EQEVVDKVMETL-DSDGDGECDFQEFMAFVAMVTTACH 85 (88)
T ss_pred CcCEECHHHHHHHHHHHhHHHhcC-CC---CHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHHHHHh
Confidence 46 5899999999988 4443 11 113355555544 4444445678888777766554443
No 262
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=20.39 E-value=1.1e+02 Score=28.91 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=22.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
+|+|+=.+..| ..+|..|++.||+|+++..
T Consensus 2 ~I~IiG~G~~G-----~~~a~~L~~~g~~V~~~~r 31 (304)
T PRK06522 2 KIAILGAGAIG-----GLFGAALAQAGHDVTLVAR 31 (304)
T ss_pred EEEEECCCHHH-----HHHHHHHHhCCCeEEEEEC
Confidence 45555444433 5688899999999999986
No 263
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=20.37 E-value=1.5e+02 Score=29.87 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=23.2
Q ss_pred HHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeE
Q 044731 106 QWFHSHANPPVAILSDFFLGWTLNLARELNIVRITF 141 (443)
Q Consensus 106 ~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~ 141 (443)
+++++. +||++|.+.. ...+|+++|+|++.+
T Consensus 365 ~~i~~~--~pdliig~~~---~~~~a~~~~ip~i~~ 395 (428)
T cd01965 365 SLAKEE--PVDLLIGNSH---GRYLARDLGIPLVRV 395 (428)
T ss_pred HHhhcc--CCCEEEECch---hHHHHHhcCCCEEEe
Confidence 344444 7999999975 467899999998755
No 264
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=20.28 E-value=98 Score=28.88 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=23.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
+-++++-.+.| -=..+|+.|++|||+|.++.-
T Consensus 7 ~~~lITGASsG---IG~~~A~~lA~~g~~liLvaR 38 (265)
T COG0300 7 KTALITGASSG---IGAELAKQLARRGYNLILVAR 38 (265)
T ss_pred cEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 44555555554 236899999999999999874
No 265
>PF12179 IKKbetaNEMObind: I-kappa-kinase-beta NEMO binding domain; InterPro: IPR022007 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with PF00069 from PFAM. These proteins are involved in inflammatory reactions. They cause release of NF-kappa-B into the nucleus of inflammatory cells and upregulation of transcription of proinflammatory cytokines. They perform this function by phosphorylating I-kappa-B proteins which are targeted for degradation to release NF-kappa-B. This kinase (I-kappa-kinase-beta) is found in association with IKK-alpha and NEMO (NF-kappa-B essential modulator). This domain is the binding site of IKK-beta for NEMO. ; GO: 0008384 IkappaB kinase activity; PDB: 3BRT_C 3BRV_C.
Probab=20.21 E-value=60 Score=20.23 Aligned_cols=23 Identities=22% Similarity=0.189 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHH
Q 044731 403 ARELRDKALAAVKSGGSSTRDLE 425 (443)
Q Consensus 403 a~~l~~~~r~a~~~gg~s~~~~~ 425 (443)
...|...+++++++.++|.+++|
T Consensus 12 lsqL~s~mqdt~~Eq~~S~m~lD 34 (38)
T PF12179_consen 12 LSQLESLMQDTMKEQDSSFMSLD 34 (38)
T ss_dssp HHHHHHHHHHHHHHCCS-GGGS-
T ss_pred HHHHHHHHHHHHHHhcchHHhcc
Confidence 44567778888899999877654
No 266
>PF14626 RNase_Zc3h12a_2: Zc3h12a-like Ribonuclease NYN domain
Probab=20.04 E-value=93 Score=24.98 Aligned_cols=28 Identities=7% Similarity=0.160 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHhCCceEEEEeCCCCch
Q 044731 23 MLPLLDLTHQLSLKNLDITILITPKNLP 50 (443)
Q Consensus 23 ~~P~l~La~~L~~rGh~Vt~~t~~~~~~ 50 (443)
+.|+..+.-...-|||++|++-+..+..
T Consensus 9 Vk~L~eIll~FilrGHKT~vyLP~yY~~ 36 (122)
T PF14626_consen 9 VKALVEILLHFILRGHKTVVYLPKYYKN 36 (122)
T ss_pred HHHHHHHHHHHHhccCeeEEEChHHHhc
Confidence 3566666666677999999998866543
Done!