Query 044731
Match_columns 443
No_of_seqs 134 out of 1129
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 10:33:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044731.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044731hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.8E-60 6.2E-65 475.5 33.2 393 8-432 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 7.5E-53 2.6E-57 426.8 39.3 405 5-433 2-469 (480)
3 2c1x_A UDP-glucose flavonoid 3 100.0 2.2E-52 7.6E-57 420.7 33.3 394 9-434 7-453 (456)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.4E-52 5E-57 425.8 32.1 401 9-434 8-480 (482)
5 2acv_A Triterpene UDP-glucosyl 100.0 5.5E-52 1.9E-56 418.8 35.4 395 7-432 7-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.2E-32 1.1E-36 272.3 28.0 356 9-430 12-419 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.1E-32 1.1E-36 269.9 18.1 332 7-431 20-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.5E-29 5E-34 252.3 24.8 345 10-435 1-402 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 8.9E-29 3.1E-33 246.6 21.6 345 10-435 1-403 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 9.6E-28 3.3E-32 238.9 25.3 348 7-431 18-412 (415)
11 3h4t_A Glycosyltransferase GTF 99.9 7.3E-27 2.5E-31 231.9 21.5 329 10-432 1-382 (404)
12 3ia7_A CALG4; glycosysltransfe 99.9 2.3E-26 7.8E-31 227.7 24.1 350 9-432 4-398 (402)
13 2iyf_A OLED, oleandomycin glyc 99.9 4.3E-26 1.5E-30 228.1 25.8 345 9-430 7-397 (430)
14 2yjn_A ERYCIII, glycosyltransf 99.9 2E-25 6.9E-30 224.1 23.6 344 7-431 18-434 (441)
15 2p6p_A Glycosyl transferase; X 99.9 4.7E-24 1.6E-28 210.0 26.7 310 10-412 1-363 (384)
16 4fzr_A SSFS6; structural genom 99.9 5.9E-23 2E-27 203.2 18.6 314 7-412 13-384 (398)
17 3oti_A CALG3; calicheamicin, T 99.9 3.9E-22 1.3E-26 197.3 23.9 310 7-412 18-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.9 9E-21 3.1E-25 186.9 21.3 325 9-428 1-384 (391)
19 3otg_A CALG1; calicheamicin, T 99.9 8.4E-20 2.9E-24 181.1 27.9 329 7-430 18-406 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.7 1.4E-14 4.8E-19 141.3 26.3 307 10-436 3-360 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.5 2.3E-14 7.8E-19 124.0 10.7 126 265-412 7-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.1 7.2E-09 2.5E-13 100.2 22.9 305 10-437 7-360 (364)
23 3c48_A Predicted glycosyltrans 98.0 0.0052 1.8E-07 60.2 27.1 120 7-142 18-152 (438)
24 3fro_A GLGA glycogen synthase; 97.8 0.016 5.5E-07 56.4 27.1 40 8-47 1-45 (439)
25 2gek_A Phosphatidylinositol ma 97.7 0.02 6.9E-07 55.2 25.5 113 7-141 18-136 (406)
26 3okp_A GDP-mannose-dependent a 97.4 0.11 3.6E-06 49.7 26.9 106 9-141 4-115 (394)
27 2jjm_A Glycosyl transferase, g 96.8 0.41 1.4E-05 45.7 28.5 111 9-141 15-131 (394)
28 3ot5_A UDP-N-acetylglucosamine 96.3 0.093 3.2E-06 51.0 15.5 112 9-141 27-144 (403)
29 2r60_A Glycosyl transferase, g 96.2 0.016 5.3E-07 58.0 9.4 126 1-141 1-149 (499)
30 2iw1_A Lipopolysaccharide core 95.9 1.2 4E-05 41.9 27.5 46 353-404 300-345 (374)
31 2jzc_A UDP-N-acetylglucosamine 95.5 0.034 1.2E-06 49.2 7.5 31 353-392 166-196 (224)
32 1v4v_A UDP-N-acetylglucosamine 93.8 0.27 9.3E-06 46.7 9.9 112 9-141 5-121 (376)
33 3vue_A GBSS-I, granule-bound s 92.9 0.1 3.5E-06 52.7 5.5 46 1-46 1-52 (536)
34 1vgv_A UDP-N-acetylglucosamine 92.6 0.22 7.6E-06 47.4 7.3 111 10-141 1-116 (384)
35 2iuy_A Avigt4, glycosyltransfe 92.6 0.12 4.1E-06 48.5 5.2 39 9-47 3-57 (342)
36 3s28_A Sucrose synthase 1; gly 92.1 0.36 1.2E-05 51.2 8.6 125 9-141 278-436 (816)
37 3beo_A UDP-N-acetylglucosamine 89.7 0.95 3.2E-05 42.7 8.4 111 9-140 8-124 (375)
38 2wqk_A 5'-nucleotidase SURE; S 88.4 2.7 9.3E-05 37.6 9.8 43 10-54 2-44 (251)
39 2f9f_A First mannosyl transfer 88.4 1.6 5.4E-05 36.4 8.0 47 353-407 127-174 (177)
40 3dzc_A UDP-N-acetylglucosamine 86.1 1.7 5.9E-05 41.7 7.7 113 8-141 24-141 (396)
41 2x0d_A WSAF; GT4 family, trans 85.3 0.55 1.9E-05 45.6 3.8 41 7-47 44-89 (413)
42 2phj_A 5'-nucleotidase SURE; S 85.1 6.1 0.00021 35.2 10.1 43 10-54 2-44 (251)
43 1psw_A ADP-heptose LPS heptosy 78.9 7.9 0.00027 36.0 9.1 45 10-54 1-47 (348)
44 3tov_A Glycosyl transferase fa 78.9 8.5 0.00029 36.1 9.3 104 8-139 7-114 (349)
45 2x6q_A Trehalose-synthase TRET 78.8 2.4 8.1E-05 40.6 5.6 41 8-48 39-81 (416)
46 2yxb_A Coenzyme B12-dependent 77.2 2.5 8.5E-05 35.0 4.4 41 8-48 17-57 (161)
47 1vgv_A UDP-N-acetylglucosamine 76.4 3.6 0.00012 38.8 6.0 42 353-402 307-348 (384)
48 4hwg_A UDP-N-acetylglucosamine 74.8 3.2 0.00011 39.7 5.2 109 13-141 12-123 (385)
49 1rzu_A Glycogen synthase 1; gl 73.4 2.6 9E-05 41.3 4.3 38 10-47 1-44 (485)
50 3hbm_A UDP-sugar hydrolase; PS 73.3 6.6 0.00022 35.7 6.6 92 10-141 1-99 (282)
51 2qzs_A Glycogen synthase; glyc 72.6 2.9 0.0001 41.0 4.4 38 10-47 1-44 (485)
52 3hbm_A UDP-sugar hydrolase; PS 71.7 16 0.00054 33.2 8.8 81 280-374 157-274 (282)
53 4dzz_A Plasmid partitioning pr 68.6 37 0.0012 28.3 10.2 32 17-48 10-41 (206)
54 1v4v_A UDP-N-acetylglucosamine 65.6 16 0.00053 34.1 7.8 56 363-430 309-364 (376)
55 3rhz_A GTF3, nucleotide sugar 63.4 7.4 0.00025 36.5 4.8 67 353-431 270-337 (339)
56 1g5t_A COB(I)alamin adenosyltr 61.7 73 0.0025 27.0 10.4 40 8-47 27-66 (196)
57 3zqu_A Probable aromatic acid 60.6 12 0.00043 32.2 5.4 43 10-53 5-47 (209)
58 1y80_A Predicted cobalamin bin 59.7 13 0.00044 32.0 5.4 45 8-52 87-131 (210)
59 3oy2_A Glycosyltransferase B73 59.2 1.1E+02 0.0039 28.4 13.0 37 10-47 1-40 (413)
60 2lpm_A Two-component response 58.4 11 0.00036 29.5 4.2 35 107-143 48-87 (123)
61 2i2x_B MTAC, methyltransferase 55.8 18 0.0006 32.3 5.8 42 8-49 122-163 (258)
62 1f9y_A HPPK, protein (6-hydrox 54.8 43 0.0015 27.3 7.4 28 282-309 2-29 (158)
63 3qjg_A Epidermin biosynthesis 54.7 13 0.00044 31.1 4.3 41 10-51 6-46 (175)
64 1ccw_A Protein (glutamate muta 54.4 18 0.00062 28.7 5.1 40 9-48 3-42 (137)
65 3ezx_A MMCP 1, monomethylamine 53.5 20 0.00068 31.0 5.6 45 8-52 91-135 (215)
66 3dzc_A UDP-N-acetylglucosamine 53.0 21 0.00072 34.0 6.2 51 362-424 341-391 (396)
67 3beo_A UDP-N-acetylglucosamine 52.8 19 0.00065 33.4 5.9 33 362-402 316-348 (375)
68 2qx0_A 7,8-dihydro-6-hydroxyme 52.4 56 0.0019 26.7 7.7 28 282-309 3-30 (159)
69 3ip0_A 2-amino-4-hydroxy-6-hyd 52.4 49 0.0017 27.0 7.4 28 282-309 2-29 (158)
70 3lqk_A Dipicolinate synthase s 50.8 17 0.00058 31.2 4.5 39 9-48 7-46 (201)
71 3to5_A CHEY homolog; alpha(5)b 49.5 21 0.00072 28.2 4.7 37 107-145 52-97 (134)
72 3ty2_A 5'-nucleotidase SURE; s 49.2 38 0.0013 30.2 6.7 46 7-54 9-54 (261)
73 1sbz_A Probable aromatic acid 49.2 20 0.00069 30.5 4.8 43 10-53 1-44 (197)
74 1cbk_A Protein (7,8-dihydro-6- 48.9 54 0.0019 26.8 7.1 28 282-309 3-30 (160)
75 1mvl_A PPC decarboxylase athal 48.7 18 0.00062 31.2 4.4 41 9-51 19-59 (209)
76 3qbc_A 2-amino-4-hydroxy-6-hyd 48.0 59 0.002 26.6 7.2 28 282-309 6-33 (161)
77 3tl4_X Glutaminyl-tRNA synthet 47.3 18 0.0006 30.6 4.0 69 354-432 100-178 (187)
78 2hy7_A Glucuronosyltransferase 45.6 15 0.0005 35.2 3.7 39 7-46 12-52 (406)
79 3vot_A L-amino acid ligase, BL 45.2 1.5E+02 0.0051 28.1 11.1 95 7-138 3-101 (425)
80 2r8r_A Sensor protein; KDPD, P 42.9 40 0.0014 29.4 5.8 41 7-47 4-44 (228)
81 2w36_A Endonuclease V; hypoxan 42.4 17 0.00058 31.7 3.2 42 103-144 92-140 (225)
82 3nxa_A Protein S100-A16; S100 41.5 15 0.00052 27.3 2.5 61 377-438 28-88 (100)
83 3mcu_A Dipicolinate synthase, 41.5 26 0.00089 30.1 4.3 38 10-48 6-44 (207)
84 2q6t_A DNAB replication FORK h 41.1 43 0.0015 32.4 6.3 42 11-52 202-244 (444)
85 2ejb_A Probable aromatic acid 40.2 49 0.0017 27.9 5.8 43 10-53 2-44 (189)
86 3gl9_A Response regulator; bet 39.8 45 0.0015 24.9 5.2 37 107-145 41-86 (122)
87 4dll_A 2-hydroxy-3-oxopropiona 38.5 35 0.0012 31.3 5.0 34 7-45 29-62 (320)
88 3auf_A Glycinamide ribonucleot 38.4 1.9E+02 0.0067 24.9 10.3 108 8-143 21-131 (229)
89 1qzu_A Hypothetical protein MD 37.5 27 0.00094 29.9 3.8 43 8-51 18-61 (206)
90 3qvl_A Putative hydantoin race 36.4 1.9E+02 0.0066 25.2 9.4 94 10-141 2-97 (245)
91 1lss_A TRK system potassium up 35.6 46 0.0016 25.5 4.8 32 9-45 4-35 (140)
92 3li6_A Calcium-binding protein 35.5 64 0.0022 20.7 4.9 53 375-433 12-64 (66)
93 1p3y_1 MRSD protein; flavoprot 34.9 32 0.0011 29.2 3.8 38 10-48 9-46 (194)
94 3goc_A Endonuclease V; alpha-b 34.8 55 0.0019 28.6 5.2 42 102-143 95-143 (237)
95 1g63_A Epidermin modifying enz 34.0 26 0.0009 29.3 3.1 38 11-49 4-41 (181)
96 3eag_A UDP-N-acetylmuramate:L- 33.7 60 0.0021 29.8 5.8 35 8-46 3-37 (326)
97 2gt1_A Lipopolysaccharide hept 33.6 21 0.00073 32.7 2.7 45 10-54 1-47 (326)
98 4eto_A Protein S100-A4; calciu 33.3 24 0.00081 25.7 2.4 60 378-438 27-86 (93)
99 3oy2_A Glycosyltransferase B73 32.9 33 0.0011 32.3 4.0 48 381-433 342-389 (413)
100 3t6k_A Response regulator rece 32.7 71 0.0024 24.3 5.4 37 107-145 43-88 (136)
101 3m6m_D Sensory/regulatory prot 31.2 57 0.0019 25.2 4.6 36 107-144 53-99 (143)
102 3f6p_A Transcriptional regulat 30.8 80 0.0027 23.3 5.3 37 107-145 41-83 (120)
103 2ywr_A Phosphoribosylglycinami 30.1 2E+02 0.0067 24.6 8.2 35 10-47 2-38 (216)
104 1id1_A Putative potassium chan 30.1 33 0.0011 27.3 3.0 32 10-46 4-35 (153)
105 4b4o_A Epimerase family protei 29.4 31 0.0011 31.0 3.0 33 10-46 1-33 (298)
106 2gk4_A Conserved hypothetical 29.3 36 0.0012 29.8 3.3 26 20-47 28-53 (232)
107 2yvq_A Carbamoyl-phosphate syn 29.0 76 0.0026 25.2 4.9 90 21-141 34-131 (143)
108 2vsy_A XCC0866; transferase, g 28.4 64 0.0022 31.9 5.4 40 7-46 203-246 (568)
109 2qyt_A 2-dehydropantoate 2-red 27.7 26 0.00088 31.9 2.1 36 5-45 4-45 (317)
110 3mc3_A DSRE/DSRF-like family p 27.7 85 0.0029 24.5 5.0 38 10-47 16-56 (134)
111 3kkj_A Amine oxidase, flavin-c 27.4 33 0.0011 29.4 2.7 18 27-44 15-32 (336)
112 4eg0_A D-alanine--D-alanine li 27.3 86 0.003 28.4 5.7 39 9-47 13-55 (317)
113 3qxc_A Dethiobiotin synthetase 26.8 59 0.002 28.6 4.2 36 9-44 20-57 (242)
114 4hb9_A Similarities with proba 26.3 37 0.0013 31.8 3.1 30 10-44 2-31 (412)
115 3lyu_A Putative hydrogenase; t 26.3 54 0.0018 25.9 3.6 35 10-47 19-53 (142)
116 3hn2_A 2-dehydropantoate 2-red 26.2 86 0.0029 28.4 5.5 45 10-65 3-47 (312)
117 3bul_A Methionine synthase; tr 26.1 73 0.0025 32.0 5.2 44 8-51 97-140 (579)
118 3zzm_A Bifunctional purine bio 25.8 96 0.0033 30.4 5.7 90 21-123 18-111 (523)
119 2bfw_A GLGA glycogen synthase; 25.7 2.6E+02 0.0089 22.5 11.9 41 353-401 145-186 (200)
120 3c3m_A Response regulator rece 25.7 1E+02 0.0036 23.3 5.3 36 107-144 42-86 (138)
121 3ga2_A Endonuclease V; alpha-b 25.1 75 0.0026 28.0 4.4 41 103-143 98-145 (246)
122 3fwz_A Inner membrane protein 25.1 44 0.0015 26.1 2.8 33 9-46 7-39 (140)
123 2zts_A Putative uncharacterize 24.8 3.1E+02 0.011 23.0 9.2 42 11-52 32-74 (251)
124 2l2q_A PTS system, cellobiose- 24.5 1.1E+02 0.0037 22.9 4.8 37 8-44 3-39 (109)
125 3rm1_A Protein S100-B; alpha-h 24.3 50 0.0017 23.6 2.8 57 378-439 26-86 (92)
126 1wrd_A TOM1, target of MYB pro 24.1 1.7E+02 0.0059 21.7 5.8 36 379-419 2-37 (103)
127 3gt7_A Sensor protein; structu 24.0 1E+02 0.0035 23.9 5.0 36 107-144 46-90 (154)
128 3doj_A AT3G25530, dehydrogenas 23.7 54 0.0018 29.8 3.5 34 7-45 19-52 (310)
129 3h1g_A Chemotaxis protein CHEY 23.7 1.4E+02 0.0047 22.2 5.5 32 114-145 51-91 (129)
130 3ll8_B Calcineurin subunit B t 23.6 98 0.0034 23.8 4.8 63 373-437 85-148 (155)
131 3fgn_A Dethiobiotin synthetase 23.2 1.1E+02 0.0036 27.0 5.2 117 11-145 28-167 (251)
132 3av3_A Phosphoribosylglycinami 23.2 3.4E+02 0.012 22.9 9.9 106 10-143 4-112 (212)
133 1dbw_A Transcriptional regulat 22.8 1.3E+02 0.0046 22.1 5.3 37 107-145 42-85 (126)
134 3n22_A Protein S100-A2; EF-han 22.7 32 0.0011 25.3 1.4 58 378-438 28-87 (98)
135 1xk4_A Calgranulin A; S100 fam 22.6 42 0.0014 23.9 2.1 56 375-435 23-79 (93)
136 3nhm_A Response regulator; pro 22.4 1.5E+02 0.0053 21.9 5.6 36 107-144 42-86 (133)
137 3f67_A Putative dienelactone h 22.0 1.3E+02 0.0044 25.1 5.5 36 10-45 32-67 (241)
138 2g1u_A Hypothetical protein TM 21.8 80 0.0027 25.0 3.9 33 9-46 19-51 (155)
139 3kjh_A CO dehydrogenase/acetyl 21.7 52 0.0018 28.3 2.9 38 10-47 1-38 (254)
140 3cg0_A Response regulator rece 21.7 1.2E+02 0.0039 22.9 4.8 32 114-145 54-92 (140)
141 2vqe_B 30S ribosomal protein S 21.5 2.1E+02 0.007 25.3 6.6 34 113-146 157-192 (256)
142 3lrx_A Putative hydrogenase; a 21.5 48 0.0016 26.8 2.4 36 10-48 24-59 (158)
143 4g65_A TRK system potassium up 21.2 26 0.00088 34.3 0.8 34 8-46 2-35 (461)
144 3grc_A Sensor protein, kinase; 21.2 1.4E+02 0.0049 22.4 5.2 37 107-145 45-90 (140)
145 1p9o_A Phosphopantothenoylcyst 21.1 52 0.0018 30.2 2.7 25 21-47 65-89 (313)
146 3a10_A Response regulator; pho 21.1 1.8E+02 0.0063 20.7 5.7 36 107-144 40-82 (116)
147 2xci_A KDO-transferase, 3-deox 21.1 1.7E+02 0.0058 27.1 6.6 94 13-142 43-138 (374)
148 1tmy_A CHEY protein, TMY; chem 21.0 1.4E+02 0.0047 21.6 4.9 32 114-145 47-85 (120)
149 3sbx_A Putative uncharacterize 20.9 1.4E+02 0.0047 25.1 5.2 33 8-41 12-48 (189)
150 1zgz_A Torcad operon transcrip 20.8 1.4E+02 0.0049 21.6 5.0 38 106-145 40-83 (122)
151 3pdi_B Nitrogenase MOFE cofact 20.7 82 0.0028 30.6 4.3 33 104-141 367-399 (458)
152 1j55_A S-100P protein; metal b 20.6 38 0.0013 24.6 1.5 57 378-435 26-82 (95)
153 2rjn_A Response regulator rece 20.4 1.4E+02 0.0046 23.1 5.0 38 107-146 46-90 (154)
154 2xvy_A Chelatase, putative; me 20.4 1.5E+02 0.0052 26.1 5.8 39 280-318 10-50 (269)
155 2vrn_A Protease I, DR1199; cys 20.4 2.1E+02 0.0072 23.4 6.4 46 1-47 1-46 (190)
156 2dpo_A L-gulonate 3-dehydrogen 20.3 53 0.0018 30.2 2.7 38 1-46 1-38 (319)
157 3lk7_A UDP-N-acetylmuramoylala 20.2 1.1E+02 0.0037 29.5 5.1 40 1-45 1-40 (451)
158 3i83_A 2-dehydropantoate 2-red 20.1 87 0.003 28.5 4.2 33 10-47 3-35 (320)
159 3eod_A Protein HNR; response r 20.1 1.4E+02 0.0047 22.1 4.8 37 107-145 46-89 (130)
160 2qr3_A Two-component system re 20.0 1.4E+02 0.0049 22.3 5.0 39 106-146 41-91 (140)
161 3n7t_A Macrophage binding prot 20.0 1.9E+02 0.0065 25.3 6.2 38 9-46 9-57 (247)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.8e-60 Score=475.54 Aligned_cols=393 Identities=23% Similarity=0.350 Sum_probs=318.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCC--ceEEEEeCCCCchhhhhhccC-CCCeeEEEeCCCCCCCCCCCcccccc
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKN--LDITILITPKNLPIVSSLLDA-RPAIQTLVLPFPSHPSVPAGVENVKE 84 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rG--h~Vt~~t~~~~~~~v~~~~~~-~~~i~~~~l~~~~~~~~~~~~~~~~~ 84 (443)
++.||+++|+|++||++||++||+.|++|| |.|||++|+.+..++.+.... ..+|+|+.+| +++|++.+...+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip----dglp~~~~~~~~ 87 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH----DGLPKGYVSSGN 87 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC----CCCCTTCCCCSC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC----CCCCCCccccCC
Confidence 468999999999999999999999999999 999999997554444322100 2579999887 567766544332
Q ss_pred cCCCChHHHHHHH-hhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcc-cCC-
Q 044731 85 LGNRGNLPIMSAL-GKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNH-TGV- 161 (443)
Q Consensus 85 ~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~-~~~- 161 (443)
+...+..+...+ ..+.+.+++++++...++||||+|.+..|+..+|+++|||.+.||+++++.++.+++++.. ...
T Consensus 88 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 88 -PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 112334444444 3566667776655333789999999999999999999999999999999998888876543 111
Q ss_pred ---CCCCCce-ecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHh
Q 044731 162 ---VKSLDVV-EFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRK 237 (443)
Q Consensus 162 ---~~~~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~ 237 (443)
..+...+ .+||+|. ++.+++|.++.. ... ..+.+++.+......++++ +++||+++||+++++++++.
T Consensus 167 ~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~--~~~~~~~~~~~~~~~~~~~--vl~ns~~eLE~~~~~~~~~~ 238 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DID--VPFATMLHKMGLELPRANA--VAINSFATIHPLIENELNSK 238 (454)
T ss_dssp HHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTT--SHHHHHHHHHHHHGGGSSC--EEESSCGGGCHHHHHHHHTT
T ss_pred CCccccccccccCCCCCC---cChhhCchhhcc-CCc--hHHHHHHHHHHHhhccCCE--EEECChhHhCHHHHHHHHhc
Confidence 1112233 3788886 888888877653 223 5567777888888888999 99999999999999999987
Q ss_pred cCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEe
Q 044731 238 MGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVK 317 (443)
Q Consensus 238 ~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~ 317 (443)
+ |++++|||++..... ....++ ++|.+|||++++++||||||||+..++.+++.+++.+|+.++++|||+++
T Consensus 239 ~--~~v~~vGPl~~~~~~-----~~~~~~-~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~ 310 (454)
T 3hbf_A 239 F--KLLLNVGPFNLTTPQ-----RKVSDE-HGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFR 310 (454)
T ss_dssp S--SCEEECCCHHHHSCC-----SCCCCT-TCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECC
T ss_pred C--CCEEEECCccccccc-----ccccch-HHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Confidence 6 589999999864322 001234 68999999988899999999999999999999999999999999999998
Q ss_pred CCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccchhhHH
Q 044731 318 TSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQFVNAR 360 (443)
Q Consensus 318 ~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ~~na~ 360 (443)
.... +.+|++|.+++++|++++ +|+|| +||+.||+
T Consensus 311 ~~~~-------~~lp~~~~~~~~~~~~vv-~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~ 382 (454)
T 3hbf_A 311 GDPK-------EKLPKGFLERTKTKGKIV-AWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTI 382 (454)
T ss_dssp SCHH-------HHSCTTHHHHTTTTEEEE-SSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred Ccch-------hcCCHhHHhhcCCceEEE-eeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHH
Confidence 7532 358999999999999999 99999 89999999
Q ss_pred HHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 361 LLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQC--GETKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 361 ~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~--~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
++++.||+|+.+.. +.+++++|+++|+++|+++ ++||+||+++++.+++|+++||||++++++|+++|.
T Consensus 383 ~v~~~~g~Gv~l~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 383 LTESVLEIGVGVDN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHTTSCSEEECGG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHhhCeeEEecC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99987899999985 6899999999999999882 389999999999999999999999999999999874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=7.5e-53 Score=426.82 Aligned_cols=405 Identities=26% Similarity=0.398 Sum_probs=297.6
Q ss_pred CCCCCcEEEEEcCCCCCChHHHHHHHHHHHhC-CceEEEEeCCC--CchhhhhhccC-CCCeeEEEeCCCCCCCCCCCcc
Q 044731 5 SNSRATHVLIFPYPAQGHMLPLLDLTHQLSLK-NLDITILITPK--NLPIVSSLLDA-RPAIQTLVLPFPSHPSVPAGVE 80 (443)
Q Consensus 5 ~~~~~~~ili~~~~~~gH~~P~l~La~~L~~r-Gh~Vt~~t~~~--~~~~v~~~~~~-~~~i~~~~l~~~~~~~~~~~~~ 80 (443)
..++++||+++|+|++||++||++||++|++| ||+|||++++. +.+.+...... ..+++|+.++... .++ ..
T Consensus 2 ~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~---~~~-~~ 77 (480)
T 2vch_A 2 EESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVD---LTD-LS 77 (480)
T ss_dssp ----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCC---CTT-SC
T ss_pred CCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCC---CCC-CC
Confidence 34456899999999999999999999999998 99999999877 34444331110 2579999887431 111 10
Q ss_pred cccccCCCChHHHHHHHhhhhHHHHHHHHhC--CCCC-cEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhc
Q 044731 81 NVKELGNRGNLPIMSALGKLYDPIIQWFHSH--ANPP-VAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWN 157 (443)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~--~~~~-D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~ 157 (443)
. .......+...+..+.+.+++++++. ..++ ||||+|.+..|+..+|+++|||+|.++++++.....+++++.
T Consensus 78 ~----~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 153 (480)
T 2vch_A 78 S----STRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPK 153 (480)
T ss_dssp T----TCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHH
T ss_pred C----chhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHH
Confidence 0 01222333344455566777777652 1278 999999999999999999999999999999887777666553
Q ss_pred cc-CCCCC----CCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHH
Q 044731 158 HT-GVVKS----LDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLD 232 (443)
Q Consensus 158 ~~-~~~~~----~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~ 232 (443)
.. ....+ ..+..+|++++ ++..+++..+... . ...+..+.+.....++..+ +++|++++++++++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~--~--~~~~~~~~~~~~~~~~~~g--~~~nt~~ele~~~~~ 224 (480)
T 2vch_A 154 LDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDR--K--DDAYKWLLHNTKRYKEAEG--ILVNTFFELEPNAIK 224 (480)
T ss_dssp HHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCT--T--SHHHHHHHHHHHHGGGCSE--EEESCCTTTSHHHHH
T ss_pred HHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcC--C--chHHHHHHHHHHhcccCCE--EEEcCHHHHhHHHHH
Confidence 21 00000 11234566664 5556666544211 1 2344555555666777788 999999999999888
Q ss_pred HHHHhc--CCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCC
Q 044731 233 YLKRKM--GHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGI 310 (443)
Q Consensus 233 ~~~~~~--~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~ 310 (443)
.+++.. . +++++|||++..... . .....+ .+|.+|||++++++||||||||+...+.+++.+++++|+.+++
T Consensus 225 ~l~~~~~~~-~~v~~vGpl~~~~~~---~-~~~~~~-~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~ 298 (480)
T 2vch_A 225 ALQEPGLDK-PPVYPVGPLVNIGKQ---E-AKQTEE-SECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQ 298 (480)
T ss_dssp HHHSCCTTC-CCEEECCCCCCCSCS---C-C------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHhcccCC-CcEEEEecccccccc---c-cCccch-hHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCC
Confidence 876521 2 589999999864321 0 001234 7899999998888999999999998999999999999999999
Q ss_pred ceEEEEeCCccccC--------CCCC-CCCchhHHHHhhcCceEeecCCCc-----------------------------
Q 044731 311 RFLWVVKTSVIHAE--------GNGY-GLIPYGFEERVAGRGLVLKGWVPQ----------------------------- 352 (443)
Q Consensus 311 ~~lw~~~~~~~~~~--------~~~~-~~lp~~~~~~~~~~~~vv~~W~PQ----------------------------- 352 (443)
+|||+++.....+. +... +.+|+||.+|++++|+++.+|+||
T Consensus 299 ~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~Gv 378 (480)
T 2vch_A 299 RFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGI 378 (480)
T ss_dssp EEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTC
T ss_pred cEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCC
Confidence 99999986431000 0111 358999999999999999669999
Q ss_pred --------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhc---CchHHHHHHHHHHHHHHHHHhcCCChH
Q 044731 353 --------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLS---QCGETKIKARELRDKALAAVKSGGSST 421 (443)
Q Consensus 353 --------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~---~~~~yr~~a~~l~~~~r~a~~~gg~s~ 421 (443)
+||+.||+++++.||+|+.+.....+.+|+++|+++|+++|. + ++||+||+++++.+++|+++||+|+
T Consensus 379 P~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~-~~~r~~a~~l~~~~~~a~~~gGss~ 457 (480)
T 2vch_A 379 PLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEG-KGVRNKMKELKEAACRVLKDDGTST 457 (480)
T ss_dssp CEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHH-HHHHHHHHHHHHHHHHHTSTTSHHH
T ss_pred CEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcch-HHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 899999999866669999997522237999999999999998 5 7999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 044731 422 RDLETLVQELRK 433 (443)
Q Consensus 422 ~~~~~~~~~~~~ 433 (443)
+++++|++++.+
T Consensus 458 ~~~~~~v~~~~~ 469 (480)
T 2vch_A 458 KALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999976
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.2e-52 Score=420.71 Aligned_cols=394 Identities=22% Similarity=0.326 Sum_probs=290.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCce--EEEEeCCCCchhhhhhcc-C-CCCeeEEEeCCCCCCCCCCCcccccc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLD--ITILITPKNLPIVSSLLD-A-RPAIQTLVLPFPSHPSVPAGVENVKE 84 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~--Vt~~t~~~~~~~v~~~~~-~-~~~i~~~~l~~~~~~~~~~~~~~~~~ 84 (443)
++||+++|+|++||++||++||++|++|||+ ||+++++.....+..... . ..+++++.++ ++++++.+...
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~----~glp~~~~~~~- 81 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS----DGVPEGYVFAG- 81 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECC----CCCCTTCCCCC-
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC----CCCCCcccccC-
Confidence 5699999999999999999999999999765 588887543322222100 0 1478998876 35555432111
Q ss_pred cCCCChHHHHHHH-hhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcc---cC
Q 044731 85 LGNRGNLPIMSAL-GKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNH---TG 160 (443)
Q Consensus 85 ~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~---~~ 160 (443)
........+...+ ..+.+.+++++++...++||||+|.++.|+..+|+++|||+|.++++++..+..+.+.+.. .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
T 2c1x_A 82 RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIG 161 (456)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHC
T ss_pred ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccC
Confidence 1112223333333 2344455555443223899999999999999999999999999999988776655433221 01
Q ss_pred C----CCCCCce-ecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHH
Q 044731 161 V----VKSLDVV-EFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLK 235 (443)
Q Consensus 161 ~----~~~~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~ 235 (443)
. ......+ .+|+++. ++..++|..+...... ..+.+.+.+......++++ +++||++++|+++++.++
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--vl~ns~~~le~~~~~~~~ 234 (456)
T 2c1x_A 162 VSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLN--SLFSRMLHRMGQVLPKATA--VFINSFEELDDSLTNDLK 234 (456)
T ss_dssp SSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTT--SHHHHHHHHHHHHGGGSSC--EEESSCGGGCHHHHHHHH
T ss_pred CcccccccccccccCCCCCc---ccHHhCchhhcCCCcc--cHHHHHHHHHHHhhhhCCE--EEECChHHHhHHHHHHHH
Confidence 1 0011122 3567664 5666666533211111 3344555555566677888 999999999999998888
Q ss_pred HhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEE
Q 044731 236 RKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWV 315 (443)
Q Consensus 236 ~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~ 315 (443)
+.+ |++++|||++..... . . ..++ .+|.+|||.+++++||||||||+...+.+++.+++.+|+.++++|||+
T Consensus 235 ~~~--~~~~~vGpl~~~~~~---~-~-~~~~-~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~ 306 (456)
T 2c1x_A 235 SKL--KTYLNIGPFNLITPP---P-V-VPNT-TGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWS 306 (456)
T ss_dssp HHS--SCEEECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred hcC--CCEEEecCcccCccc---c-c-ccch-hhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEE
Confidence 886 589999999864321 0 0 1123 579999999888899999999999888899999999999999999999
Q ss_pred EeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------------ccchhh
Q 044731 316 VKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------------ADQFVN 358 (443)
Q Consensus 316 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------------~DQ~~n 358 (443)
++.+.. ..+|+++.+++++|++++ +|+|| +||+.|
T Consensus 307 ~~~~~~-------~~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~N 378 (456)
T 2c1x_A 307 LRDKAR-------VHLPEGFLEKTRGYGMVV-PWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLN 378 (456)
T ss_dssp CCGGGG-------GGSCTTHHHHHTTTEEEE-SCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ECCcch-------hhCCHHHHhhcCCceEEe-cCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHH
Confidence 986431 358899988888899998 99999 899999
Q ss_pred HHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCch---HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 044731 359 ARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCG---ETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKL 434 (443)
Q Consensus 359 a~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~---~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~ 434 (443)
|+++++.||+|+.+.. +.+++++|+++|+++|.+ + +||+||+++++.+++|+++||||++++++|++++.+.
T Consensus 379 a~~l~~~~g~g~~l~~---~~~~~~~l~~~i~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 379 GRMVEDVLEIGVRIEG---GVFTKSGLMSCFDQILSQ-EKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 453 (456)
T ss_dssp HHHHHHTSCCEEECGG---GSCCHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHhCeEEEecC---CCcCHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Confidence 9999999999999985 689999999999999998 5 8999999999999999999999999999999998653
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.4e-52 Score=425.83 Aligned_cols=401 Identities=23% Similarity=0.405 Sum_probs=292.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccC-----CCCeeEEEeCCCCCCCCCCCccccc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDA-----RPAIQTLVLPFPSHPSVPAGVENVK 83 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~-----~~~i~~~~l~~~~~~~~~~~~~~~~ 83 (443)
++||+++|+|++||++||++||++|++|||+|||++++.+...+.+.... ..+++|+.++ +++++.....
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~----~~lp~~~~~~- 82 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP----DGLTPMEGDG- 82 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC----CCCC-------
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC----CCCCCccccc-
Confidence 57999999999999999999999999999999999987765554332110 0379999887 3444411000
Q ss_pred ccCCCChHHHHHHH-hhhhHHHHHHHHhC-----CCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhc
Q 044731 84 ELGNRGNLPIMSAL-GKLYDPIIQWFHSH-----ANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWN 157 (443)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~~ll~~~-----~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~ 157 (443)
... .....+...+ ..+.+.++++++.. ..++||||+|.++.|+..+|+++|||+|.++++++.....+.+++.
T Consensus 83 ~~~-~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 161 (482)
T 2pq6_A 83 DVS-QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRS 161 (482)
T ss_dssp ----CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHH
T ss_pred Ccc-hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHH
Confidence 001 2233344444 55667777777642 1389999999999999999999999999999999877666544332
Q ss_pred c--cCC-CC-------C---CCce-ecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCc
Q 044731 158 H--TGV-VK-------S---LDVV-EFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSF 223 (443)
Q Consensus 158 ~--~~~-~~-------~---~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 223 (443)
. .+. .. . .... .+|+++. ++..+++.+....... ..+.+.+........++++ +++||+
T Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--vl~nt~ 234 (482)
T 2pq6_A 162 FVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPN--DIMLEFFIEVADRVNKDTT--ILLNTF 234 (482)
T ss_dssp HHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTT--CHHHHHHHHHHHTCCTTCC--EEESSC
T ss_pred HHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcc--cHHHHHHHHHHHhhccCCE--EEEcCh
Confidence 1 010 00 0 0011 2345543 4555565544322112 3444555555566677888 999999
Q ss_pred hhhhHHHHHHHHHhcCCCceeeeccccCC-CCCC-----CC-CCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHH
Q 044731 224 DDLESEYLDYLKRKMGHDRVFGVGPLSLL-GPES-----TR-GGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKE 296 (443)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~v~~vGpl~~~-~~~~-----~~-~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~ 296 (443)
++||+++++++++.+ +++++|||++.. .... .. .......+ .+|.+|||++++++||||||||+..++.+
T Consensus 235 ~~le~~~~~~~~~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 235 NELESDVINALSSTI--PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKED-TECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp GGGGHHHHHHHHTTC--TTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred HHHhHHHHHHHHHhC--CcEEEEcCCcccccccccccccccccccccccc-hHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 999999999998876 589999999863 1110 00 00001133 56999999988889999999999888999
Q ss_pred HHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc------------------------
Q 044731 297 QMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------ 352 (443)
Q Consensus 297 ~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------ 352 (443)
++.+++.+|++++++|||+++.+...+ ....+|+++.+++++|++|+ +|+||
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~~~~---~~~~l~~~~~~~~~~~~~v~-~~~pq~~~L~h~~~~~~vth~G~~s~~Ea 387 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDLVIG---GSVIFSSEFTNEIADRGLIA-SWCPQDKVLNHPSIGGFLTHCGWNSTTES 387 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGSTT---TGGGSCHHHHHHHTTTEEEE-SCCCHHHHHTSTTEEEEEECCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCcccc---ccccCcHhHHHhcCCCEEEE-eecCHHHHhcCCCCCEEEecCCcchHHHH
Confidence 999999999999999999998642110 01238899988888999998 89999
Q ss_pred -------------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCch---HHHHHHHHHHHHHHHHHhc
Q 044731 353 -------------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCG---ETKIKARELRDKALAAVKS 416 (443)
Q Consensus 353 -------------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~---~yr~~a~~l~~~~r~a~~~ 416 (443)
+||+.||+++++.+|+|+.+. ..+|+++|+++|+++|.+ + +||+||+++++.+++|+++
T Consensus 388 l~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~----~~~~~~~l~~~i~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~ 462 (482)
T 2pq6_A 388 ICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID----TNVKREELAKLINEVIAG-DKGKKMKQKAMELKKKAEENTRP 462 (482)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC----SSCCHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHTST
T ss_pred HHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC----CCCCHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999986669999997 479999999999999998 6 6999999999999999999
Q ss_pred CCChHHHHHHHHHHHHhc
Q 044731 417 GGSSTRDLETLVQELRKL 434 (443)
Q Consensus 417 gg~s~~~~~~~~~~~~~~ 434 (443)
||||++++++|++++...
T Consensus 463 gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 463 GGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp TCHHHHHHHHHHHHTTCC
T ss_pred CCcHHHHHHHHHHHHHhc
Confidence 999999999999988543
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5.5e-52 Score=418.85 Aligned_cols=395 Identities=26% Similarity=0.388 Sum_probs=297.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCc-----hhhhhhccCCCCeeEEEeCCCCCCCCCCCc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNL-----PIVSSLLDARPAIQTLVLPFPSHPSVPAGV 79 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~-----~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~ 79 (443)
.+++||+++|+|++||++||++||++|++| ||+|||++++.+. +.+........+++|+.+|.. .+++ .
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~---~~~~-~ 82 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV---EPPP-Q 82 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC---CCCC-G
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC---CCCc-c
Confidence 346899999999999999999999999999 9999999998752 222221111257999988742 1232 1
Q ss_pred ccccccCCCChHHHHHHHhhhhHHHHHHHHhC-CCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcc
Q 044731 80 ENVKELGNRGNLPIMSALGKLYDPIIQWFHSH-ANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNH 158 (443)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~ 158 (443)
+..... ... +...+..+.+.+++++++. ..++||||+|.+..|+..+|+++|||++.++++++..+..+++++..
T Consensus 83 ~~~~~~--~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (463)
T 2acv_A 83 ELLKSP--EFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNR 158 (463)
T ss_dssp GGGGSH--HHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGS
T ss_pred cccCCc--cHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhh
Confidence 111110 111 4444556667788888761 12899999999999999999999999999999998887777766543
Q ss_pred c---CCCCCCC---ceecCCC-CCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHH
Q 044731 159 T---GVVKSLD---VVEFRDL-PRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYL 231 (443)
Q Consensus 159 ~---~~~~~~~---~~~~p~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~ 231 (443)
. ....... +..+|++ ++ ++..+++..+... . . .+..+.+.....+++.+ +++||++++|++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~--~--~-~~~~~~~~~~~~~~~~~--~l~nt~~ele~~~~ 228 (463)
T 2acv_A 159 QIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK--D--G-GYIAYYKLAERFRDTKG--IIVNTFSDLEQSSI 228 (463)
T ss_dssp CTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT--T--T-HHHHHHHHHHHHTTSSE--EEESCCHHHHHHHH
T ss_pred cccCCCCCccccCceeECCCCCCC---CChHHCchhhcCC--c--h-HHHHHHHHHHhcccCCE--EEECCHHHHhHHHH
Confidence 1 1111111 3456776 54 6666666544322 1 2 44455555566677788 99999999999998
Q ss_pred HHHHHhc--CCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCc-cCCHHHHHHHHHHHHhC
Q 044731 232 DYLKRKM--GHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQK-VLSKEQMEALALGLEKS 308 (443)
Q Consensus 232 ~~~~~~~--~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~-~~~~~~~~~i~~al~~~ 308 (443)
+.+++.. + +++++|||++......... ....++ .+|.+|||++++++||||||||+. .++.+++.+++.+|+++
T Consensus 229 ~~l~~~~~p~-~~v~~vGpl~~~~~~~~~~-~~~~~~-~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~ 305 (463)
T 2acv_A 229 DALYDHDEKI-PPIYAVGPLLDLKGQPNPK-LDQAQH-DLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHS 305 (463)
T ss_dssp HHHHHHCTTS-CCEEECCCCCCSSCCCBTT-BCHHHH-HHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhccccC-CcEEEeCCCcccccccccc-cccccc-hhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhC
Confidence 8888765 5 7999999998643200000 000134 679999999888899999999998 88999999999999999
Q ss_pred CCceEEEEeCCccccCCCCCCCCchhHHHHh--hcCceEeecCCCc----------------------------------
Q 044731 309 GIRFLWVVKTSVIHAEGNGYGLIPYGFEERV--AGRGLVLKGWVPQ---------------------------------- 352 (443)
Q Consensus 309 ~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~vv~~W~PQ---------------------------------- 352 (443)
+++|||+++.+. +.+|++|.+++ +++++++ +|+||
T Consensus 306 ~~~~l~~~~~~~--------~~l~~~~~~~~~~~~~~~v~-~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~ 376 (463)
T 2acv_A 306 GVRFLWSNSAEK--------KVFPEGFLEWMELEGKGMIC-GWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTW 376 (463)
T ss_dssp TCEEEEECCCCG--------GGSCTTHHHHHHHHCSEEEE-SSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred CCcEEEEECCCc--------ccCChhHHHhhccCCCEEEE-ccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeec
Confidence 999999998631 24788888888 8899998 89999
Q ss_pred ---ccchhhHHHHHhhcceeEEe-ecCCCC--CCCHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 044731 353 ---ADQFVNARLLVDDLRVAVLV-CEGGDS--VPDSDELGKVIGESLS-QCGETKIKARELRDKALAAVKSGGSSTRDLE 425 (443)
Q Consensus 353 ---~DQ~~na~~v~~~~g~G~~l-~~~~~~--~~t~e~l~~ai~~vl~-~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~ 425 (443)
+||+.||+++++.+|+|+.+ .....+ .+|.++|+++|+++|+ + ++||+||+++++.+++|+++||+|+++++
T Consensus 377 P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~-~~~r~~a~~l~~~~~~a~~~gGss~~~l~ 455 (463)
T 2acv_A 377 PIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD-SIVHKKVQEMKEMSRNAVVDGGSSLISVG 455 (463)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT-CTHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred cchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 89999999975566999999 321124 7999999999999997 5 69999999999999999999999999999
Q ss_pred HHHHHHH
Q 044731 426 TLVQELR 432 (443)
Q Consensus 426 ~~~~~~~ 432 (443)
+|++++.
T Consensus 456 ~~v~~~~ 462 (463)
T 2acv_A 456 KLIDDIT 462 (463)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.2e-32 Score=272.28 Aligned_cols=356 Identities=14% Similarity=0.103 Sum_probs=228.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
++||++++++++||++|+++||++|+++||+||+++++.+.+.+.. .++++++++. .++.+.........+
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~----~~~~~~~~~~~~~~~ 82 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-----AGATPVVYDS----ILPKESNPEESWPED 82 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----HTCEEEECCC----CSCCTTCTTCCCCSS
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-----CCCEEEecCc----cccccccchhhcchh
Confidence 5799999999999999999999999999999999999877666655 5788887763 222221110000101
Q ss_pred ---ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCC
Q 044731 89 ---GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSL 165 (443)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (443)
.+..+......+.+.+.+++++. +|||||+|.+..|+..+|+++|||+|.+++.+...... ......
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~-~~~~~~------- 152 (424)
T 2iya_A 83 QESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGF-EEDVPA------- 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTH-HHHSGG-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccc-cccccc-------
Confidence 11222333344556677777776 89999999988889999999999999998766411111 000000
Q ss_pred CceecCCCCC-----CCcccCCCCChhh---hhccCCCCChHHHHHHHH------HhhhhccCccEEEEcCchhhhHHHH
Q 044731 166 DVVEFRDLPR-----SPVFKEEHLPTVF---RIYMVSDSDPEFEFVKDG------MVANTLSWGWGCVFNSFDDLESEYL 231 (443)
Q Consensus 166 ~~~~~p~~p~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~n~~~~l~~~~~ 231 (443)
..+++.. ..+....+...+. ...... ...+.+.+.+. .......+. ++++++..++++.
T Consensus 153 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~--~l~~~~~~l~~~~- 225 (424)
T 2iya_A 153 ---VQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRF-FTRLSAFLEEHGVDTPATEFLIAPNR--CIVALPRTFQIKG- 225 (424)
T ss_dssp ---GSCCCC---------------------HHHHHHH-HHHHHHHHHHTTCCSCHHHHHHCCSS--EEESSCTTTSTTG-
T ss_pred ---ccccccccccccccccccccchhhhccchhHHHH-HHHHHHHHHHcCCCCCHHHhccCCCc--EEEEcchhhCCCc-
Confidence 0000000 0000000000000 000000 00011111110 011113556 8899988887542
Q ss_pred HHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCc
Q 044731 232 DYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIR 311 (443)
Q Consensus 232 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~ 311 (443)
..++ +++++|||++... ....+|++.++++++|||+|||......+.+.+++++|+..+.+
T Consensus 226 ----~~~~-~~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 286 (424)
T 2iya_A 226 ----DTVG-DNYTFVGPTYGDR--------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWH 286 (424)
T ss_dssp ----GGCC-TTEEECCCCCCCC--------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSE
T ss_pred ----cCCC-CCEEEeCCCCCCc--------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcE
Confidence 3456 7899999986421 12346887666678999999999866778899999999988889
Q ss_pred eEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccch
Q 044731 312 FLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQF 356 (443)
Q Consensus 312 ~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~ 356 (443)
++|.+..+... .....+| .+..++ +|+|| +||+
T Consensus 287 ~~~~~g~~~~~---~~~~~~~--------~~v~~~-~~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~ 354 (424)
T 2iya_A 287 VVLSVGRFVDP---ADLGEVP--------PNVEVH-QWVPQLDILTKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQT 354 (424)
T ss_dssp EEEECCTTSCG---GGGCSCC--------TTEEEE-SSCCHHHHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred EEEEECCcCCh---HHhccCC--------CCeEEe-cCCCHHHHHhhCCEEEECCchhHHHHHHHcCCCEEEecCccchH
Confidence 99887653210 0011122 344566 99999 7999
Q ss_pred hhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 044731 357 VNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQE 430 (443)
Q Consensus 357 ~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~ 430 (443)
.||+++++. |+|+.+.. +.++.++|.++|+++|.+ +.||++++++++.+++ .+.+.+..+.+.+.
T Consensus 355 ~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 419 (424)
T 2iya_A 355 MNAERIVEL-GLGRHIPR---DQVTAEKLREAVLAVASD-PGVAERLAAVRQEIRE----AGGARAAADILEGI 419 (424)
T ss_dssp HHHHHHHHT-TSEEECCG---GGCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHT----SCHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCEEEcCc---CCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHH
Confidence 999999876 99999985 678999999999999999 8999999999999874 34344555544443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.98 E-value=3.1e-32 Score=269.89 Aligned_cols=332 Identities=12% Similarity=0.088 Sum_probs=197.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCC-C--CCCCccccc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHP-S--VPAGVENVK 83 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~-~--~~~~~~~~~ 83 (443)
.+.|||||+++|++||++|+++||++|++|||+|||++++.+..... .++.+.++...... . .+.......
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE------AGLCAVDVSPGVNYAKLFVPDDTDVTD 93 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT------TTCEEEESSTTCCSHHHHSCCC-----
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh------cCCeeEecCCchhHhhhcccccccccc
Confidence 46799999999999999999999999999999999999877654332 46777765421100 0 010000000
Q ss_pred ccCC--CChHH----HHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhc
Q 044731 84 ELGN--RGNLP----IMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWN 157 (443)
Q Consensus 84 ~~~~--~~~~~----~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~ 157 (443)
.... ..... +..........+.+++++. +||+||+|.+..++..+|+.+|+|.+.+...+.........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~--- 168 (400)
T 4amg_A 94 PMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA--- 168 (400)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH---
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh---
Confidence 0000 01111 1122233445566677777 89999999999999999999999988775543211000000
Q ss_pred ccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHh
Q 044731 158 HTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRK 237 (443)
Q Consensus 158 ~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~ 237 (443)
... ........+.......... ........ ......+.
T Consensus 169 -----------------------------~~~-------~~l~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~ 206 (400)
T 4amg_A 169 -----------------------------LIR-------RAMSKDYERHGVTGEPTGS--VRLTTTPP----SVEALLPE 206 (400)
T ss_dssp -----------------------------HHH-------HHTHHHHHHTTCCCCCSCE--EEEECCCH----HHHHTSCG
T ss_pred -----------------------------HHH-------HHHHHHHHHhCCCcccccc--hhhcccCc----hhhccCcc
Confidence 000 0001111110000011111 11221110 11000000
Q ss_pred -cCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCC--HHHHHHHHHHHHhCCCceEE
Q 044731 238 -MGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLS--KEQMEALALGLEKSGIRFLW 314 (443)
Q Consensus 238 -~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~--~~~~~~i~~al~~~~~~~lw 314 (443)
...+..+++.+.... .. ..+.+|++.++++++|||||||+...+ .+++.+++++++..+.+++|
T Consensus 207 ~~~~~~~~~~~~~~~~------------~~-~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~ 273 (400)
T 4amg_A 207 DRRSPGAWPMRYVPYN------------GG-AVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVL 273 (400)
T ss_dssp GGCCTTCEECCCCCCC------------CC-EECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEE
T ss_pred cccCCcccCccccccc------------cc-ccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEE
Confidence 000233333322211 12 455679998888999999999987543 36788899999999999999
Q ss_pred EEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccchhhH
Q 044731 315 VVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQFVNA 359 (443)
Q Consensus 315 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~~na 359 (443)
....... .....+|++ .+++ +|+|| +||+.||
T Consensus 274 ~~~~~~~----~~~~~~~~~--------v~~~-~~~p~~~lL~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na 340 (400)
T 4amg_A 274 TLGGGDL----ALLGELPAN--------VRVV-EWIPLGALLETCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNR 340 (400)
T ss_dssp ECCTTCC----CCCCCCCTT--------EEEE-CCCCHHHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHH
T ss_pred EecCccc----cccccCCCC--------EEEE-eecCHHHHhhhhhheeccCCccHHHHHHHhCCCEEEecCcccHHHHH
Confidence 8876431 122345554 4466 99999 9999999
Q ss_pred HHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044731 360 RLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 360 ~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 431 (443)
+++++. |+|+.++. ..+++ ++|+++|+| ++||+||+++++.+++ ..|.. .+...++.+
T Consensus 341 ~~v~~~-G~g~~l~~---~~~~~----~al~~lL~d-~~~r~~a~~l~~~~~~---~~~~~--~~a~~le~l 398 (400)
T 4amg_A 341 DVLTGL-GIGFDAEA---GSLGA----EQCRRLLDD-AGLREAALRVRQEMSE---MPPPA--ETAAXLVAL 398 (400)
T ss_dssp HHHHHH-TSEEECCT---TTCSH----HHHHHHHHC-HHHHHHHHHHHHHHHT---SCCHH--HHHHHHHHH
T ss_pred HHHHHC-CCEEEcCC---CCchH----HHHHHHHcC-HHHHHHHHHHHHHHHc---CCCHH--HHHHHHHHh
Confidence 999987 99999985 56665 467788899 8999999999999985 24443 344444444
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=1.5e-29 Score=252.27 Aligned_cols=345 Identities=13% Similarity=0.092 Sum_probs=212.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRG 89 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 89 (443)
|||++++.++.||++|+++||++|++|||+|||+++..+.+.+.. .+++++.++... .+..... ....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~~----~~~~~~~---~~~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-----VGVPHVPVGPSA----RAPIQRA---KPLT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCCEEECCC-----------CC---SCCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCCH----HHHhhcc---cccc
Confidence 589999999999999999999999999999999999876555554 678998886421 1111110 0011
Q ss_pred hHHHHHHHh-hhhHHHHHHHH-hCCCCCcEEEeCC-Ccch--HHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCC
Q 044731 90 NLPIMSALG-KLYDPIIQWFH-SHANPPVAILSDF-FLGW--TLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKS 164 (443)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~ll~-~~~~~~D~vI~D~-~~~~--~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (443)
...+...+. .....++++++ .. +||+||+|. +..| +..+|+++|||+|.+++.++.....
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~~--~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~------------- 133 (415)
T 1iir_A 69 AEDVRRFTTEAIATQFDEIPAAAE--GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP------------- 133 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS-------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc-------------
Confidence 111212221 22334455543 33 899999998 5667 7889999999999998876422100
Q ss_pred CCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhh----------------hhccCccEEEEcCchhhhH
Q 044731 165 LDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVA----------------NTLSWGWGCVFNSFDDLES 228 (443)
Q Consensus 165 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~n~~~~l~~ 228 (443)
.+|.....+.++.............. ...+..+....+. .... . +++|++..+++
T Consensus 134 ----~~p~~~~~~~~~~~~~~n~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~--~l~~~~~~l~~ 204 (415)
T 1iir_A 134 ----YYPPPPLGEPSTQDTIDIPAQWERNN--QSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-H--PWVAADPVLAP 204 (415)
T ss_dssp ----SSCCCC---------CHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-S--CEECSCTTTSC
T ss_pred ----ccCCccCCccccchHHHHHHHHHHHH--HHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-C--EEEeeChhhcC
Confidence 00100000000000000000000000 0001101000000 1112 4 67788777764
Q ss_pred -HHHHHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHh
Q 044731 229 -EYLDYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEK 307 (443)
Q Consensus 229 -~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~ 307 (443)
+. .. .++++|||++.... ...+ .++.+||+++ +++|||||||+. .+.+.+..++++|+.
T Consensus 205 ~~~-----~~---~~~~~vG~~~~~~~--------~~~~-~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~ 264 (415)
T 1iir_A 205 LQP-----TD---LDAVQTGAWILPDE--------RPLS-PELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRA 264 (415)
T ss_dssp CCC-----CS---SCCEECCCCCCCCC--------CCCC-HHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHH
T ss_pred CCc-----cc---CCeEeeCCCccCcc--------cCCC-HHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHH
Confidence 21 00 27899999986422 1234 7889999864 369999999987 667788889999999
Q ss_pred CCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------
Q 044731 308 SGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ----------------------------------- 352 (443)
Q Consensus 308 ~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ----------------------------------- 352 (443)
.+.+|+|+.+.+.. ....+| ++..++ +|+||
T Consensus 265 ~~~~~v~~~g~~~~-----~~~~~~--------~~v~~~-~~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~ 330 (415)
T 1iir_A 265 HGRRVILSRGWADL-----VLPDDG--------ADCFAI-GEVNHQVLFGRVAAVIHHGGAGTTHVAARAGAPQILLPQM 330 (415)
T ss_dssp TTCCEEECTTCTTC-----CCSSCG--------GGEEEC-SSCCHHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CCCeEEEEeCCCcc-----cccCCC--------CCEEEe-CcCChHHHHhhCCEEEeCCChhHHHHHHHcCCCEEECCCC
Confidence 99999998765321 011222 334455 99999
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
+||+.||+++++. |+|+.+.. ..++.++|.++|+++ .+ +.||++++++++.+++ .+| . ..+..+++.+.
T Consensus 331 ~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~-~~~~~~~~~~~~~~~~---~~~-~-~~~~~~i~~~~ 399 (415)
T 1iir_A 331 ADQPYYAGRVAEL-GVGVAHDG---PIPTFDSLSAALATA-LT-PETHARATAVAGTIRT---DGA-A-VAARLLLDAVS 399 (415)
T ss_dssp TTHHHHHHHHHHH-TSEEECSS---SSCCHHHHHHHHHHH-TS-HHHHHHHHHHHHHSCS---CHH-H-HHHHHHHHHHH
T ss_pred CccHHHHHHHHHC-CCcccCCc---CCCCHHHHHHHHHHH-cC-HHHHHHHHHHHHHHhh---cCh-H-HHHHHHHHHHH
Confidence 7999999999776 99999885 678999999999999 98 8999999999998853 223 2 34455555554
Q ss_pred hcc
Q 044731 433 KLR 435 (443)
Q Consensus 433 ~~~ 435 (443)
..+
T Consensus 400 ~~~ 402 (415)
T 1iir_A 400 REK 402 (415)
T ss_dssp TC-
T ss_pred hcc
Confidence 433
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.96 E-value=8.9e-29 Score=246.65 Aligned_cols=345 Identities=11% Similarity=0.010 Sum_probs=215.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRG 89 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 89 (443)
|||++++.++.||++|+++||++|+++||+|||+++..+.+.+.. .++++++++....+.... . .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~~~~~~~~-~-----~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-----VGVPHVPVGLPQHMMLQE-G-----MPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----HTCCEEECSCCGGGCCCT-T-----SCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-----cCCeeeecCCCHHHHHhh-c-----cccch
Confidence 589999999999999999999999999999999999766555554 578888876421010110 0 00011
Q ss_pred hHHHHHHHhh-hhHHHHHHHH-hCCCCCcEEEeCC-Ccch--HHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCC
Q 044731 90 NLPIMSALGK-LYDPIIQWFH-SHANPPVAILSDF-FLGW--TLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKS 164 (443)
Q Consensus 90 ~~~~~~~~~~-~~~~~~~ll~-~~~~~~D~vI~D~-~~~~--~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (443)
...+...+.. ....++.+.+ .. +||+||+|. +..+ +..+|+.+|||+|.+++.+.....
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~~--~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-------------- 133 (416)
T 1rrv_A 70 PEEEQRLAAMTVEMQFDAVPGAAE--GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-------------- 133 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--------------
Confidence 1111111111 1223333332 33 899999997 4456 778999999999998876532100
Q ss_pred CCceecC-CCCCCCcccCCCCChhhhhccCCCCChHHHHHH----HH------------HhhhhccCccEEEEcCchhhh
Q 044731 165 LDVVEFR-DLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVK----DG------------MVANTLSWGWGCVFNSFDDLE 227 (443)
Q Consensus 165 ~~~~~~p-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------~~~~~~~~~~~~~~n~~~~l~ 227 (443)
..+| .++ ++................ ...+..+. .. ....... . +++|++..++
T Consensus 134 ---~~~p~~~~--~~~~~~r~~n~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~--~l~~~~~~l~ 203 (416)
T 1rrv_A 134 ---PHLPPAYD--EPTTPGVTDIRVLWEERA--ARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-R--PLLAADPVLA 203 (416)
T ss_dssp ---SSSCCCBC--SCCCTTCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-S--CEECSCTTTS
T ss_pred ---cccCCCCC--CCCCchHHHHHHHHHHHH--HHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-C--eEEccCcccc
Confidence 0011 110 001000011110000000 00000000 00 0111222 5 7888888776
Q ss_pred HHHHHHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCcc-CCHHHHHHHHHHHH
Q 044731 228 SEYLDYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKV-LSKEQMEALALGLE 306 (443)
Q Consensus 228 ~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~-~~~~~~~~i~~al~ 306 (443)
++. + . .++++|||++.... ...+ .++.+||++. +++|||+|||... ...+.+.+++++|+
T Consensus 204 ~~~-----~--~-~~~~~vG~~~~~~~--------~~~~-~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~ 264 (416)
T 1rrv_A 204 PLQ-----P--D-VDAVQTGAWLLSDE--------RPLP-PELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIR 264 (416)
T ss_dssp CCC-----S--S-CCCEECCCCCCCCC--------CCCC-HHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHH
T ss_pred CCC-----C--C-CCeeeECCCccCcc--------CCCC-HHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHH
Confidence 431 0 1 27899999986432 1234 7789999864 3699999999864 45567888999999
Q ss_pred hCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc----------------------------------
Q 044731 307 KSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ---------------------------------- 352 (443)
Q Consensus 307 ~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ---------------------------------- 352 (443)
..+.+|+|+.+.... ....+| ++..++ +|+||
T Consensus 265 ~~~~~~v~~~g~~~~-----~~~~~~--------~~v~~~-~~~~~~~ll~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~ 330 (416)
T 1rrv_A 265 AQGRRVILSRGWTEL-----VLPDDR--------DDCFAI-DEVNFQALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPR 330 (416)
T ss_dssp HTTCCEEEECTTTTC-----CCSCCC--------TTEEEE-SSCCHHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HCCCeEEEEeCCccc-----cccCCC--------CCEEEe-ccCChHHHhccCCEEEecCChhHHHHHHHcCCCEEEccC
Confidence 999999998765421 011233 344555 99999
Q ss_pred -ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044731 353 -ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 353 -~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 431 (443)
+||+.||+++++. |+|+.+.. ..++.++|.++|+++ .+ +.||++++++++.+++ .++. +.++.+++.+
T Consensus 331 ~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~-~~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~ 399 (416)
T 1rrv_A 331 NTDQPYFAGRVAAL-GIGVAHDG---PTPTFESLSAALTTV-LA-PETRARAEAVAGMVLT----DGAA-AAADLVLAAV 399 (416)
T ss_dssp SBTHHHHHHHHHHH-TSEEECSS---SCCCHHHHHHHHHHH-TS-HHHHHHHHHHTTTCCC----CHHH-HHHHHHHHHH
T ss_pred CCCcHHHHHHHHHC-CCccCCCC---CCCCHHHHHHHHHHh-hC-HHHHHHHHHHHHHHhh----cCcH-HHHHHHHHHH
Confidence 8999999999877 99999875 678999999999999 99 8999999999998863 3334 5555543655
Q ss_pred Hhcc
Q 044731 432 RKLR 435 (443)
Q Consensus 432 ~~~~ 435 (443)
...+
T Consensus 400 ~~~~ 403 (416)
T 1rrv_A 400 GREK 403 (416)
T ss_dssp HC--
T ss_pred hccC
Confidence 5443
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.96 E-value=9.6e-28 Score=238.90 Aligned_cols=348 Identities=13% Similarity=0.092 Sum_probs=219.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccC
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELG 86 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 86 (443)
.+++||++++.++.||++|+++||++|+++||+|+++++..+.+.+.. .++++..++.+ ++..........
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~----~~~~~~~~~~~~ 88 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-----AGATVVPYQSE----IIDADAAEVFGS 88 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCEEEECCCS----TTTCCHHHHHHS
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-----cCCEEEecccc----ccccccchhhcc
Confidence 457899999999999999999999999999999999998776666655 67888887632 111110000001
Q ss_pred CCCh---HH-HHHHHhhhhHHHHHHHHhCCCCCcEEEeC-CCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCC
Q 044731 87 NRGN---LP-IMSALGKLYDPIIQWFHSHANPPVAILSD-FFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGV 161 (443)
Q Consensus 87 ~~~~---~~-~~~~~~~~~~~~~~ll~~~~~~~D~vI~D-~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~ 161 (443)
.... .. +......+...+.+++++. +||+||+| ....++..+|+.+|||++.+.+....... +.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~-------- 157 (415)
T 3rsc_A 89 DDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YS-------- 157 (415)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CC--------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cc--------
Confidence 1111 12 2333334456677777777 99999999 77777888999999999987644321000 00
Q ss_pred CCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHH------hhhhcc-CccEEEEcCchhhhHHHHHHH
Q 044731 162 VKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGM------VANTLS-WGWGCVFNSFDDLESEYLDYL 234 (443)
Q Consensus 162 ~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~n~~~~l~~~~~~~~ 234 (443)
. .+.+.. ......+...... . ..+.+.+.+.. ...... +. .+......++ ..
T Consensus 158 -----~--~~~~~~---~~~~~~p~~~~~~--~--~~~~~~~~~~g~~~~~~~~~~~~~~~--~l~~~~~~~~-----~~ 216 (415)
T 3rsc_A 158 -----F--SQDMVT---LAGTIDPLDLPVF--R--DTLRDLLAEHGLSRSVVDCWNHVEQL--NLVFVPKAFQ-----IA 216 (415)
T ss_dssp -----H--HHHHHH---HHTCCCGGGCHHH--H--HHHHHHHHHTTCCCCHHHHHTCCCSE--EEESSCTTTS-----TT
T ss_pred -----c--cccccc---ccccCChhhHHHH--H--HHHHHHHHHcCCCCChhhhhcCCCCe--EEEEcCcccC-----CC
Confidence 0 000000 0000000000000 0 00001110000 000111 23 3443333332 22
Q ss_pred HHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEE
Q 044731 235 KRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLW 314 (443)
Q Consensus 235 ~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw 314 (443)
+..++ .++.++||++... .+..+|+...+++++||+++||......+.+..++++|.+.+.+++|
T Consensus 217 ~~~~~-~~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~ 281 (415)
T 3rsc_A 217 GDTFD-DRFVFVGPCFDDR--------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVM 281 (415)
T ss_dssp GGGCC-TTEEECCCCCCCC--------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred cccCC-CceEEeCCCCCCc--------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 34456 6799999887422 22335665555678999999999876778889999999998889999
Q ss_pred EEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccchhhH
Q 044731 315 VVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQFVNA 359 (443)
Q Consensus 315 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~~na 359 (443)
..+.+... .....+| .+..+. +|+|| +||+.||
T Consensus 282 ~~g~~~~~---~~l~~~~--------~~v~~~-~~~~~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a 349 (415)
T 3rsc_A 282 TLGGQVDP---AALGDLP--------PNVEAH-RWVPHVKVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMA 349 (415)
T ss_dssp ECTTTSCG---GGGCCCC--------TTEEEE-SCCCHHHHHHHEEEEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred EeCCCCCh---HHhcCCC--------CcEEEE-ecCCHHHHHhhCCEEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHH
Confidence 87653210 0111233 344455 99998 8999999
Q ss_pred HHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044731 360 RLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 360 ~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 431 (443)
+++++. |+|+.+.. +.++.++|.++|++++.+ +.|+++++++++.+.+ ++++.+.++.+.+.+
T Consensus 350 ~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 350 RRVDQL-GLGAVLPG---EKADGDTLLAAVGAVAAD-PALLARVEAMRGHVRR----AGGAARAADAVEAYL 412 (415)
T ss_dssp HHHHHH-TCEEECCG---GGCCHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHH
T ss_pred HHHHHc-CCEEEccc---CCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHh
Confidence 999988 99999985 678999999999999999 8999999999999875 455556666555544
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.95 E-value=7.3e-27 Score=231.91 Aligned_cols=329 Identities=16% Similarity=0.111 Sum_probs=209.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRG 89 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 89 (443)
|||+|++.++.||++|++.||++|.+|||+|+++++..+.+.+.. .++.+.+++.+... . .... ... ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~~~-~-~~~~-~~~-~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-----VGVPMVPVGRAVRA-G-AREP-GEL-PPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-----TTCCEEECSSCSSG-G-GSCT-TCC-CTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-----cCCceeecCCCHHH-H-hccc-cCC-HHHH
Confidence 589999999999999999999999999999999998776666665 68889887632110 0 0000 000 1122
Q ss_pred hHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchH---HHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCCC
Q 044731 90 NLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWT---LNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSLD 166 (443)
Q Consensus 90 ~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~---~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (443)
...+...+......+.++++ ++|+||+|.....+ ..+|+.+|||++.+...+......
T Consensus 72 ~~~~~~~~~~~~~~l~~~~~----~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~--------------- 132 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAIE----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE--------------- 132 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHHT----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG---------------
T ss_pred HHHHHHHHHHHHHHHHHHhc----CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh---------------
Confidence 23333333333333444332 69999999665544 678999999999887765411000
Q ss_pred ceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhc---------------cCccEEEEcCchhhhHHHH
Q 044731 167 VVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTL---------------SWGWGCVFNSFDDLESEYL 231 (443)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~n~~~~l~~~~~ 231 (443)
.+ ....... + ...+..+.+..+..+. ... .+.+....+.+.
T Consensus 133 -----~~-----------~~~~~~~--~--~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~--~l~~~~~~l~p~-- 188 (404)
T 3h4t_A 133 -----QS-----------QAERDMY--N--QGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQ--PWLAADPVLSPL-- 188 (404)
T ss_dssp -----SC-----------HHHHHHH--H--HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSS--CEECSCTTTSCC--
T ss_pred -----hH-----------HHHHHHH--H--HHHHHHhHHHHHHHHHHcCCCCCcchhhccccCC--eEEeeCcceeCC--
Confidence 00 0000000 0 0011111111110000 111 233433333221
Q ss_pred HHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCc
Q 044731 232 DYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIR 311 (443)
Q Consensus 232 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~ 311 (443)
+.++ ++++.+|+++.+.. ...+ +++.+||+. ++++|||||||+.. +.+.+..++++|+..+.+
T Consensus 189 ----~~~~-~~~~~~G~~~~~~~--------~~~~-~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~ 251 (404)
T 3h4t_A 189 ----RPTD-LGTVQTGAWILPDQ--------RPLS-AELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRR 251 (404)
T ss_dssp ----CTTC-CSCCBCCCCCCCCC--------CCCC-HHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCC
T ss_pred ----CCCC-CCeEEeCccccCCC--------CCCC-HHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCE
Confidence 1233 57889998875432 2244 778889984 34699999999987 677889999999999999
Q ss_pred eEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccch
Q 044731 312 FLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQF 356 (443)
Q Consensus 312 ~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~ 356 (443)
+||+.+..... ...+ +++..++ +|+|| +||+
T Consensus 252 vv~~~g~~~~~-----~~~~--------~~~v~~~-~~~~~~~ll~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~ 317 (404)
T 3h4t_A 252 VVLSSGWAGLG-----RIDE--------GDDCLVV-GEVNHQVLFGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQP 317 (404)
T ss_dssp EEEECTTTTCC-----CSSC--------CTTEEEE-SSCCHHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred EEEEeCCcccc-----cccC--------CCCEEEe-cCCCHHHHHhhCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHH
Confidence 99987654210 0112 2345566 99999 8999
Q ss_pred hhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 357 VNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 357 ~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
.||+++++. |+|+.+.. ..++.++|.++|+++++ +.|+++++++++.++ + .+..+..+.+.+.+.
T Consensus 318 ~na~~~~~~-G~g~~l~~---~~~~~~~l~~ai~~ll~--~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 318 YYAGRVADL-GVGVAHDG---PTPTVESLSAALATALT--PGIRARAAAVAGTIR----T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHHHHHH-TSEEECSS---SSCCHHHHHHHHHHHTS--HHHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCEeccCc---CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHh
Confidence 999999988 99999985 68899999999999997 599999999999885 3 334455555544443
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.95 E-value=2.3e-26 Score=227.65 Aligned_cols=350 Identities=13% Similarity=0.119 Sum_probs=215.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
++||++++.++.||++|++.|+++|+++||+|+++++..+.+.+.. .++++..++.+.. ...............
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~-~~~~~~~~~~~~~~~ 77 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-----AGAEVVLYKSEFD-TFHVPEVVKQEDAET 77 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-----TTCEEEECCCGGG-TSSSSSSSCCTTHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-----cCCEEEecccccc-cccccccccccchHH
Confidence 3599999999999999999999999999999999998665555554 6788887763210 000000000000001
Q ss_pred ChHH-HHHHHhhhhHHHHHHHHhCCCCCcEEEeC-CCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCCC
Q 044731 89 GNLP-IMSALGKLYDPIIQWFHSHANPPVAILSD-FFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSLD 166 (443)
Q Consensus 89 ~~~~-~~~~~~~~~~~~~~ll~~~~~~~D~vI~D-~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (443)
.... +......+...+.+++++. +||+||+| .+..++..+|+.+|||+|.+.+....... +...
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~----------- 143 (402)
T 3ia7_A 78 QLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLF----------- 143 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHH-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccc-----------
Confidence 1122 2222334456667777777 99999999 77778888999999999887643221100 0000
Q ss_pred ceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHH------Hhhhhcc-CccEEEEcCchhhhHHHHHHHHHhcC
Q 044731 167 VVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDG------MVANTLS-WGWGCVFNSFDDLESEYLDYLKRKMG 239 (443)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~n~~~~l~~~~~~~~~~~~~ 239 (443)
+.+.. ......+...... . ....+.+.+. ....... +. .+......++ ..+..++
T Consensus 144 ----~~~~~---~~~~~~~~~~~~~--~--~~~~~~~~~~g~~~~~~~~~~~~~~~--~l~~~~~~~~-----~~~~~~~ 205 (402)
T 3ia7_A 144 ----KELWK---SNGQRHPADVEAV--H--SVLVDLLGKYGVDTPVKEYWDEIEGL--TIVFLPKSFQ-----PFAETFD 205 (402)
T ss_dssp ----HHHHH---HHTCCCGGGSHHH--H--HHHHHHHHTTTCCSCHHHHHTCCCSC--EEESSCGGGS-----TTGGGCC
T ss_pred ----ccccc---cccccChhhHHHH--H--HHHHHHHHHcCCCCChhhhhcCCCCe--EEEEcChHhC-----CccccCC
Confidence 00000 0000000000000 0 0000000000 0000111 33 4444433333 2233456
Q ss_pred CCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 044731 240 HDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTS 319 (443)
Q Consensus 240 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~ 319 (443)
.++.++||+..... ...+|+...+++++||+++||......+.+..+++++...+.+++|..+.+
T Consensus 206 -~~~~~vGp~~~~~~--------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 270 (402)
T 3ia7_A 206 -ERFAFVGPTLTGRD--------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGF 270 (402)
T ss_dssp -TTEEECCCCCCC------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTT
T ss_pred -CCeEEeCCCCCCcc--------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCc
Confidence 68999998874321 122465544567899999999987777788999999998888888887754
Q ss_pred ccccCCCCCCCCchhHHHHhhcCceEeecCCCc------------------------------------ccchhhHHHHH
Q 044731 320 VIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------------------ADQFVNARLLV 363 (443)
Q Consensus 320 ~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------------------~DQ~~na~~v~ 363 (443)
... .....+| .+..+. +|+|| +||+.||++++
T Consensus 271 ~~~---~~~~~~~--------~~v~~~-~~~~~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~ 338 (402)
T 3ia7_A 271 LDP---AVLGPLP--------PNVEAH-QWIPFHSVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVI 338 (402)
T ss_dssp SCG---GGGCSCC--------TTEEEE-SCCCHHHHHTTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHH
T ss_pred CCh---hhhCCCC--------CcEEEe-cCCCHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHH
Confidence 210 0111222 344455 88888 69999999999
Q ss_pred hhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044731 364 DDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELR 432 (443)
Q Consensus 364 ~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 432 (443)
+. |+|+.+.. +.++.++|.++|.++|.+ +.|+++++++++.+.+ ++++.+..+.+.+.+.
T Consensus 339 ~~-g~g~~~~~---~~~~~~~l~~~~~~ll~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 339 EL-GLGSVLRP---DQLEPASIREAVERLAAD-SAVRERVRRMQRDILS----SGGPARAADEVEAYLG 398 (402)
T ss_dssp HT-TSEEECCG---GGCSHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHH
T ss_pred Hc-CCEEEccC---CCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHhh----CChHHHHHHHHHHHHh
Confidence 88 99999985 678999999999999999 8999999999998854 4556666666655544
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.95 E-value=4.3e-26 Score=228.07 Aligned_cols=345 Identities=16% Similarity=0.167 Sum_probs=214.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
++||++++.++.||++|++.|+++|+++||+|+++++....+.+.. .+++++.++.. .+.+..........
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~~----~~~~~~~~~~~~~~ 77 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-----TGPRPVLYHST----LPGPDADPEAWGST 77 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-----TSCEEEECCCC----SCCTTSCGGGGCSS
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-----CCCEEEEcCCc----Cccccccccccchh
Confidence 4699999999999999999999999999999999998766444443 67888877631 22111110000101
Q ss_pred ---ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCC
Q 044731 89 ---GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSL 165 (443)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (443)
.+..+...+..+...+.+++++. +||+||+|.+..++..+|+.+|||+|.+++....... +...+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~~~~~------- 147 (430)
T 2iyf_A 78 LLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEEEVAE------- 147 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHHHTHH-------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-ccccccc-------
Confidence 11122222334456677777777 8999999987778888999999999988765421100 0000000
Q ss_pred CceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHH------HhhhhccCccEEEEcCchhhhHHHHHHHHHhcC
Q 044731 166 DVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDG------MVANTLSWGWGCVFNSFDDLESEYLDYLKRKMG 239 (443)
Q Consensus 166 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~ 239 (443)
+. ... .. ..+. .... . ....+.+.+. .......+. +++++...++... ..++
T Consensus 148 -~~----~~~---~~--~~~~-~~~~--~--~~~~~~~~~~g~~~~~~~~~~~~~~--~l~~~~~~~~~~~-----~~~~ 205 (430)
T 2iyf_A 148 -PM----WRE---PR--QTER-GRAY--Y--ARFEAWLKENGITEHPDTFASHPPR--SLVLIPKALQPHA-----DRVD 205 (430)
T ss_dssp -HH----HHH---HH--HSHH-HHHH--H--HHHHHHHHHTTCCSCHHHHHHCCSS--EEECSCGGGSTTG-----GGSC
T ss_pred -ch----hhh---hc--cchH-HHHH--H--HHHHHHHHHhCCCCCHHHHhcCCCc--EEEeCcHHhCCCc-----ccCC
Confidence 00 000 00 0000 0000 0 0011111110 011113566 8888887776431 2345
Q ss_pred CCc-eeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhC-CCceEEEEe
Q 044731 240 HDR-VFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKS-GIRFLWVVK 317 (443)
Q Consensus 240 ~~~-v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~-~~~~lw~~~ 317 (443)
++ +++|||.+.... ...+|++..+++++||+++||......+.+.++++++++. +.+++|.++
T Consensus 206 -~~~v~~vG~~~~~~~--------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G 270 (430)
T 2iyf_A 206 -EDVYTFVGACQGDRA--------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIG 270 (430)
T ss_dssp -TTTEEECCCCC-------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC
T ss_pred -CccEEEeCCcCCCCC--------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeC
Confidence 67 999998664211 1124665445678999999998865678888999999886 778888776
Q ss_pred CCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccchhhHHHH
Q 044731 318 TSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQFVNARLL 362 (443)
Q Consensus 318 ~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~~na~~v 362 (443)
.+... ...+.+ +++..++ +|+|| +||+.||+++
T Consensus 271 ~~~~~---~~l~~~--------~~~v~~~-~~~~~~~~l~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~ 338 (430)
T 2iyf_A 271 RKVTP---AELGEL--------PDNVEVH-DWVPQLAILRQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML 338 (430)
T ss_dssp ---CG---GGGCSC--------CTTEEEE-SSCCHHHHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred CCCCh---HHhccC--------CCCeEEE-ecCCHHHHhhccCEEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHH
Confidence 53210 001112 2344555 99998 7999999999
Q ss_pred HhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 044731 363 VDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQE 430 (443)
Q Consensus 363 ~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~ 430 (443)
++. |+|+.+.. +.++.++|.++|++++.+ +.+++++.++++.+++. +++.+.++.+.+.
T Consensus 339 ~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~ 397 (430)
T 2iyf_A 339 QGL-GVARKLAT---EEATADLLRETALALVDD-PEVARRLRRIQAEMAQE----GGTRRAADLIEAE 397 (430)
T ss_dssp HHT-TSEEECCC---C-CCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH----CHHHHHHHHHHTT
T ss_pred HHc-CCEEEcCC---CCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHhc----CcHHHHHHHHHHH
Confidence 877 99999875 678999999999999999 89999999999988752 3445555555443
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.94 E-value=2e-25 Score=224.08 Aligned_cols=344 Identities=12% Similarity=0.142 Sum_probs=200.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCC-CCCCCCc-ccc--
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSH-PSVPAGV-ENV-- 82 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~-~~~~~~~-~~~-- 82 (443)
..++||++++.++.||++|+++||++|.++||+|+|+++..+.+.+.. .++++++++.... +++.... ...
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~ 92 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIID 92 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhccccc
Confidence 356899999999999999999999999999999999998776555544 6889988763210 0000000 000
Q ss_pred ----ccc----CC-CChHHH---HHHH----h-----h-hhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCcee
Q 044731 83 ----KEL----GN-RGNLPI---MSAL----G-----K-LYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRIT 140 (443)
Q Consensus 83 ----~~~----~~-~~~~~~---~~~~----~-----~-~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~ 140 (443)
.+. +. ..+..+ ...+ . . ....+.+++++. +||+||+|.+..++..+|+.+|||+|.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgiP~v~ 170 (441)
T 2yjn_A 93 YVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGTPHAR 170 (441)
T ss_dssp HHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTCCEEE
T ss_pred ccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCCCEEE
Confidence 000 00 011111 1111 1 1 334444556666 899999999777888999999999998
Q ss_pred EechhHHHHHHHhhhhcccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhh---------
Q 044731 141 FFSSGSFLASVSDYCWNHTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANT--------- 211 (443)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 211 (443)
+...+.........+... .. ..|. .. . . ..+.+.+......+-
T Consensus 171 ~~~~~~~~~~~~~~~~~~--------~~---~~~~---~~---~---------~--~~~~~~l~~~~~~~g~~~~~~~~~ 222 (441)
T 2yjn_A 171 LLWGPDITTRARQNFLGL--------LP---DQPE---EH---R---------E--DPLAEWLTWTLEKYGGPAFDEEVV 222 (441)
T ss_dssp ECSSCCHHHHHHHHHHHH--------GG---GSCT---TT---C---------C--CHHHHHHHHHHHHTTCCCCCGGGT
T ss_pred EecCCCcchhhhhhhhhh--------cc---cccc---cc---c---------c--chHHHHHHHHHHHcCCCCCCcccc
Confidence 865442211111000000 00 0010 00 0 0 111111111111110
Q ss_pred ccCccEEEEcCchhhhHHHHHHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCc
Q 044731 212 LSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQK 291 (443)
Q Consensus 212 ~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~ 291 (443)
..+. .+..+...++.+ ..+ +. ..+++... . .+ .++.+|++..+++++|||++||..
T Consensus 223 ~~~~--~l~~~~~~~~~~------~~~--~~-~~~~~~~~-----------~-~~-~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 223 VGQW--TIDPAPAAIRLD------TGL--KT-VGMRYVDY-----------N-GP-SVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp SCSS--EEECSCGGGSCC------CCC--CE-EECCCCCC-----------C-SS-CCCCGGGSSCCSSCEEEEEC----
T ss_pred CCCe--EEEecCccccCC------CCC--CC-CceeeeCC-----------C-CC-cccchHhhcCCCCCEEEEECCCCc
Confidence 1222 333332222210 000 00 12222110 0 12 446689986566789999999987
Q ss_pred cC---CHHHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc----------------
Q 044731 292 VL---SKEQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ---------------- 352 (443)
Q Consensus 292 ~~---~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ---------------- 352 (443)
.. ..+.+..++++|...+.++||..+.... +....+| .+..++ +|+||
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~----~~l~~~~--------~~v~~~-~~~~~~~ll~~ad~~V~~~G~ 345 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQL----EGVANIP--------DNVRTV-GFVPMHALLPTCAATVHHGGP 345 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTTT----SSCSSCC--------SSEEEC-CSCCHHHHGGGCSEEEECCCH
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcch----hhhccCC--------CCEEEe-cCCCHHHHHhhCCEEEECCCH
Confidence 53 3356778889999889999998774321 1111122 344555 99998
Q ss_pred -------------------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 044731 353 -------------------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAA 413 (443)
Q Consensus 353 -------------------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a 413 (443)
+||+.||+++++. |+|+.+.. +.++.++|.++|++++.+ +.|+++++++++.+++
T Consensus 346 ~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~- 419 (441)
T 2yjn_A 346 GSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPV---PELTPDQLRESVKRVLDD-PAHRAGAARMRDDMLA- 419 (441)
T ss_dssp HHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT---TTCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccc---ccCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHc-
Confidence 7999999999887 99999885 678999999999999999 8999999999999864
Q ss_pred HhcCCChHHHHHHHHHHH
Q 044731 414 VKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 414 ~~~gg~s~~~~~~~~~~~ 431 (443)
+++..+.++.+.+.+
T Consensus 420 ---~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 420 ---EPSPAEVVGICEELA 434 (441)
T ss_dssp ---SCCHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHH
Confidence 333445555544433
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.93 E-value=4.7e-24 Score=210.05 Aligned_cols=310 Identities=10% Similarity=0.042 Sum_probs=197.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccc----cc-c
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVEN----VK-E 84 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~----~~-~ 84 (443)
|||++++.++.||++|+++|+++|+++||+|+++++....+.+.. .+++++.++... ....... .. .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~---~~~~~~~~~~~~~~~ 72 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-----VGLPAVATTDLP---IRHFITTDREGRPEA 72 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCCEEESCSSC---HHHHHHBCTTSCBCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcc---hHHHHhhhcccCccc
Confidence 589999999999999999999999999999999998765444444 578888765211 0000000 00 0
Q ss_pred c-CC-CChHHH-----HHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhhc
Q 044731 85 L-GN-RGNLPI-----MSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCWN 157 (443)
Q Consensus 85 ~-~~-~~~~~~-----~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~ 157 (443)
. .. .....+ ..........+.+++++. +||+||+|.+..++..+|+.+|||+|.++..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~----------- 139 (384)
T 2p6p_A 73 IPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV----------- 139 (384)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC-----------
T ss_pred cCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCc-----------
Confidence 0 00 001111 111223344555666777 899999998777888899999999987753211
Q ss_pred ccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHH-hhhhccCccEEEEcCchhhhHHHHHHHHH
Q 044731 158 HTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGM-VANTLSWGWGCVFNSFDDLESEYLDYLKR 236 (443)
Q Consensus 158 ~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~l~~~~~~~~~~ 236 (443)
.+. ....... ....+...+.. ......+. +++++...++.+. +
T Consensus 140 ---------------~~~-------~~~~~~~-------~~~~~~~~~~g~~~~~~~~~--~l~~~~~~~~~~~-----~ 183 (384)
T 2p6p_A 140 ---------------DAD-------GIHPGAD-------AELRPELSELGLERLPAPDL--FIDICPPSLRPAN-----A 183 (384)
T ss_dssp ---------------CCT-------TTHHHHH-------HHTHHHHHHTTCSSCCCCSE--EEECSCGGGSCTT-----S
T ss_pred ---------------ccc-------hhhHHHH-------HHHHHHHHHcCCCCCCCCCe--EEEECCHHHCCCC-----C
Confidence 000 0000000 00111111100 00011345 7777776665321 0
Q ss_pred hcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccC-----CHHHHHHHHHHHHhCCCc
Q 044731 237 KMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVL-----SKEQMEALALGLEKSGIR 311 (443)
Q Consensus 237 ~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~-----~~~~~~~i~~al~~~~~~ 311 (443)
++.+++.+++ . . .+ .++.+|++.++++++||++|||.... +.+.+..++++|.+.+.+
T Consensus 184 -~~~~~~~~~~-~---~-----------~~-~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~ 246 (384)
T 2p6p_A 184 -APARMMRHVA-T---S-----------RQ-CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVE 246 (384)
T ss_dssp -CCCEECCCCC-C---C-----------CC-CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCE
T ss_pred -CCCCceEecC-C---C-----------CC-CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcE
Confidence 1101222331 1 0 11 34567887655668999999998764 457788999999999999
Q ss_pred eEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------ccch
Q 044731 312 FLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------ADQF 356 (443)
Q Consensus 312 ~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~DQ~ 356 (443)
++|+.+.+. .+.+ ...+++ +.+ +|+|| +||+
T Consensus 247 ~~~~~g~~~-----------~~~l-~~~~~~-v~~-~~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~ 312 (384)
T 2p6p_A 247 LIVAAPDTV-----------AEAL-RAEVPQ-ARV-GWTPLDVVAPTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLE 312 (384)
T ss_dssp EEEECCHHH-----------HHHH-HHHCTT-SEE-ECCCHHHHGGGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHH
T ss_pred EEEEeCCCC-----------HHhh-CCCCCc-eEE-cCCCHHHHHhhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccch
Confidence 999876321 1111 123333 455 89998 7999
Q ss_pred hhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 044731 357 VNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALA 412 (443)
Q Consensus 357 ~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~ 412 (443)
.||+++++. |+|+.+.. +.++.++|.++|+++|.+ +.||++++++++.+++
T Consensus 313 ~~a~~~~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 313 APARRVADY-GAAIALLP---GEDSTEAIADSCQELQAK-DTYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHHH-TSEEECCT---TCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHC-CCeEecCc---CCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHh
Confidence 999999877 99999885 678999999999999999 8999999999999975
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.90 E-value=5.9e-23 Score=203.20 Aligned_cols=314 Identities=14% Similarity=0.087 Sum_probs=180.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCC-CCCCCCc--cccc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSH-PSVPAGV--ENVK 83 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~-~~~~~~~--~~~~ 83 (443)
..+|||++++.++.||++|++.|+++|.++||+|+++++..+.+.+.. .++.+..++.... ..+.... ....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCccc
Confidence 457999999999999999999999999999999999998666555555 6778877752100 0000000 0000
Q ss_pred ccCCC-------ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHhhhh
Q 044731 84 ELGNR-------GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSDYCW 156 (443)
Q Consensus 84 ~~~~~-------~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~ 156 (443)
..... ....+......+...+.+++++. +||+||+|....++..+|+.+|+|+|.+..........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~----- 160 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI----- 160 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH-----
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh-----
Confidence 00000 01111222234455667777887 89999999877778889999999988765432100000
Q ss_pred cccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhh-----hhccCccEEEEcCchhhhHHHH
Q 044731 157 NHTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVA-----NTLSWGWGCVFNSFDDLESEYL 231 (443)
Q Consensus 157 ~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~n~~~~l~~~~~ 231 (443)
. ......+...... ...... .+......+....
T Consensus 161 -------------------------------~--------~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~- 198 (398)
T 4fzr_A 161 -------------------------------K--------SAGVGELAPELAELGLTDFPDPLL--SIDVCPPSMEAQP- 198 (398)
T ss_dssp -------------------------------H--------HHHHHHTHHHHHTTTCSSCCCCSE--EEECSCGGGC----
T ss_pred -------------------------------h--------HHHHHHHHHHHHHcCCCCCCCCCe--EEEeCChhhCCCC-
Confidence 0 0000000000000 001111 2222222222110
Q ss_pred HHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccC--------CHHHHHHHHH
Q 044731 232 DYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVL--------SKEQMEALAL 303 (443)
Q Consensus 232 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~--------~~~~~~~i~~ 303 (443)
. +....+... +... .. .++.+|+...+++++||+++||.... ..+.+..+++
T Consensus 199 ----~----~~~~~~~~~-~~~~----------~~-~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 4fzr_A 199 ----K----PGTTKMRYV-PYNG----------RN-DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQ 258 (398)
T ss_dssp ---------CCCEECCCC-CCCC----------SS-CCCCHHHHSCCSSCEEECC----------------CCSHHHHHH
T ss_pred ----C----CCCCCeeee-CCCC----------CC-CCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHH
Confidence 0 111222110 0000 11 33456776555677999999998643 3456888999
Q ss_pred HHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-------------------------------
Q 044731 304 GLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ------------------------------- 352 (443)
Q Consensus 304 al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ------------------------------- 352 (443)
+|.+.+.+++|+...... .... ..+++..+. +|+||
T Consensus 259 al~~~~~~~v~~~~~~~~----~~l~--------~~~~~v~~~-~~~~~~~ll~~ad~~v~~gG~~t~~Ea~~~G~P~v~ 325 (398)
T 4fzr_A 259 ELPKLGFEVVVAVSDKLA----QTLQ--------PLPEGVLAA-GQFPLSAIMPACDVVVHHGGHGTTLTCLSEGVPQVS 325 (398)
T ss_dssp HGGGGTCEEEECCCC--------------------CCTTEEEE-SCCCHHHHGGGCSEEEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHhCCCEEEEEeCCcch----hhhc--------cCCCcEEEe-CcCCHHHHHhhCCEEEecCCHHHHHHHHHhCCCEEe
Confidence 999999999997765321 0011 223345555 99998
Q ss_pred ----ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 044731 353 ----ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALA 412 (443)
Q Consensus 353 ----~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~ 412 (443)
+||+.||.++++. |.|+.+.. +.++.++|.++|.+++.+ +.||+++.+.++.+++
T Consensus 326 ~p~~~~q~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~-~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 326 VPVIAEVWDSARLLHAA-GAGVEVPW---EQAGVESVLAACARIRDD-SSYVGNARRLAAEMAT 384 (398)
T ss_dssp CCCSGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHHHHC-THHHHHHHHHHHHHTT
T ss_pred cCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHc
Confidence 8999999999988 99999985 678999999999999999 8999999999998864
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.90 E-value=3.9e-22 Score=197.34 Aligned_cols=310 Identities=15% Similarity=0.142 Sum_probs=191.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcc------
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVE------ 80 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~------ 80 (443)
.+.|||+|++.++.||++|++.|+++|.++||+|+++++ .+.+.+.. .++.+..++... .+.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~--~~~~~~~~~~~~~ 89 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDY--SAVKVFEQVAKDN 89 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-----TTCEEEESSTTC--CHHHHHHHHHHHC
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-----CCCeeEecCCcc--CHHHHhhhcccCC
Confidence 456899999999999999999999999999999999999 66555554 688888776310 0000000
Q ss_pred ---------cccccCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHH
Q 044731 81 ---------NVKELGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASV 151 (443)
Q Consensus 81 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~ 151 (443)
............+......+...+.+++++. +||+||+|....++..+|+.+|+|+|.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~--- 164 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT--- 164 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC---
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc---
Confidence 0000000122223333455667788888888 89999999777778889999999988765331100
Q ss_pred HhhhhcccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHH
Q 044731 152 SDYCWNHTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYL 231 (443)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~ 231 (443)
.. . ..... ..+...+.+.......... .+......+..+
T Consensus 165 ----------------------~~---~-----~~~~~-------~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-- 203 (398)
T 3oti_A 165 ----------------------RG---M-----HRSIA-------SFLTDLMDKHQVSLPEPVA--TIESFPPSLLLE-- 203 (398)
T ss_dssp ----------------------TT---H-----HHHHH-------TTCHHHHHHTTCCCCCCSE--EECSSCGGGGTT--
T ss_pred ----------------------cc---h-----hhHHH-------HHHHHHHHHcCCCCCCCCe--EEEeCCHHHCCC--
Confidence 00 0 00000 0011111111100011111 222222222110
Q ss_pred HHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccC--CHHHHHHHHHHHHhCC
Q 044731 232 DYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVL--SKEQMEALALGLEKSG 309 (443)
Q Consensus 232 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~--~~~~~~~i~~al~~~~ 309 (443)
. . +....+. ..+.. .. ..+.+|+...+++++||+++||.... ..+.+..++++|.+.+
T Consensus 204 ---~---~-~~~~~~~--~~~~~----------~~-~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~ 263 (398)
T 3oti_A 204 ---A---E-PEGWFMR--WVPYG----------GG-AVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVD 263 (398)
T ss_dssp ---S---C-CCSBCCC--CCCCC----------CC-EECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSS
T ss_pred ---C---C-CCCCCcc--ccCCC----------CC-cCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCC
Confidence 0 0 0111111 00000 11 34556877656678999999998643 5567888999999989
Q ss_pred CceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------------cc
Q 044731 310 IRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-----------------------------------AD 354 (443)
Q Consensus 310 ~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-----------------------------------~D 354 (443)
.+++|+.+.... .....+| .+..+. +|+|| +|
T Consensus 264 ~~~v~~~g~~~~----~~l~~~~--------~~v~~~-~~~~~~~ll~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~d 330 (398)
T 3oti_A 264 ADFVLALGDLDI----SPLGTLP--------RNVRAV-GWTPLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRD 330 (398)
T ss_dssp SEEEEECTTSCC----GGGCSCC--------TTEEEE-SSCCHHHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCCTTC
T ss_pred CEEEEEECCcCh----hhhccCC--------CcEEEE-ccCCHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEcCCCch
Confidence 999998775421 0111233 344455 99988 89
Q ss_pred chhhH--HHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 044731 355 QFVNA--RLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALA 412 (443)
Q Consensus 355 Q~~na--~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~ 412 (443)
|+.|| .++++. |+|+.+.. +..+.+.|. +++.| +.||++++++++.+++
T Consensus 331 q~~~a~~~~~~~~-g~g~~~~~---~~~~~~~l~----~ll~~-~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 331 QFQHTAREAVSRR-GIGLVSTS---DKVDADLLR----RLIGD-ESLRTAAREVREEMVA 381 (398)
T ss_dssp CSSCTTHHHHHHH-TSEEECCG---GGCCHHHHH----HHHHC-HHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHC-CCEEeeCC---CCCCHHHHH----HHHcC-HHHHHHHHHHHHHHHh
Confidence 99999 999887 99999985 667887777 88889 8999999999999874
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.87 E-value=9e-21 Score=186.93 Aligned_cols=325 Identities=15% Similarity=0.124 Sum_probs=192.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEe-CCCC-CC-C----CCCCccc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVL-PFPS-HP-S----VPAGVEN 81 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l-~~~~-~~-~----~~~~~~~ 81 (443)
+|||+|++.++.||++|++.|+++|.++||+|+++++....+.+.. .++.+..+ +.+. .+ . .+.....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNPA 75 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCGG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhcccccccc
Confidence 4799999999999999999999999999999999997554444444 57788776 3210 00 0 0000000
Q ss_pred ccccCC-CChHHHHHHHhhh-------hHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHHh
Q 044731 82 VKELGN-RGNLPIMSALGKL-------YDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVSD 153 (443)
Q Consensus 82 ~~~~~~-~~~~~~~~~~~~~-------~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~ 153 (443)
...... .....+......+ ...+.+++++. +||+||+|....++..+|+.+|||++.+......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~------ 147 (391)
T 3tsa_A 76 FGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP------ 147 (391)
T ss_dssp GGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC------
T ss_pred cccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc------
Confidence 000000 0011122212223 56667778888 8999999986667778899999998876533210
Q ss_pred hhhcccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhh-----ccCccEEEEcCchhhhH
Q 044731 154 YCWNHTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANT-----LSWGWGCVFNSFDDLES 228 (443)
Q Consensus 154 ~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~n~~~~l~~ 228 (443)
.. . ... .....++........ .... .+.....+++.
T Consensus 148 --------------------~~------~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 188 (391)
T 3tsa_A 148 --------------------TA------G----PFS-------DRAHELLDPVCRHHGLTGLPTPEL--ILDPCPPSLQA 188 (391)
T ss_dssp --------------------TT------T----HHH-------HHHHHHHHHHHHHTTSSSSCCCSE--EEECSCGGGSC
T ss_pred --------------------cc------c----ccc-------chHHHHHHHHHHHcCCCCCCCCce--EEEecChhhcC
Confidence 00 0 000 111111111111110 0122 23332222221
Q ss_pred HHHHHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCcc---CCHHHHHHHHHHH
Q 044731 229 EYLDYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKV---LSKEQMEALALGL 305 (443)
Q Consensus 229 ~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~---~~~~~~~~i~~al 305 (443)
.. .... ..+.++ |. . .. ..+..|+...+++++||+++||... .+.+.+..++++
T Consensus 189 ~~-----~~~~-~~~~~~-p~----~----------~~-~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~- 245 (391)
T 3tsa_A 189 SD-----APQG-APVQYV-PY----N----------GS-GAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA- 245 (391)
T ss_dssp TT-----SCCC-EECCCC-CC----C----------CC-EECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-
T ss_pred CC-----CCcc-CCeeee-cC----C----------CC-cCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-
Confidence 10 0000 011111 10 0 11 3445677765667899999999843 346778888888
Q ss_pred HhC-CCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc--------------------------------
Q 044731 306 EKS-GIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ-------------------------------- 352 (443)
Q Consensus 306 ~~~-~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ-------------------------------- 352 (443)
.+. +.+++|........ ....+ ..+..+. +|+||
T Consensus 246 ~~~p~~~~v~~~~~~~~~----~l~~~--------~~~v~~~-~~~~~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~ 312 (391)
T 3tsa_A 246 TELPGVEAVIAVPPEHRA----LLTDL--------PDNARIA-ESVPLNLFLRTCELVICAGGSGTAFTATRLGIPQLVL 312 (391)
T ss_dssp HTSTTEEEEEECCGGGGG----GCTTC--------CTTEEEC-CSCCGGGTGGGCSEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred ccCCCeEEEEEECCcchh----hcccC--------CCCEEEe-ccCCHHHHHhhCCEEEeCCCHHHHHHHHHhCCCEEec
Confidence 777 67888877653210 01112 2334455 88888
Q ss_pred ---ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 044731 353 ---ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLV 428 (443)
Q Consensus 353 ---~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~ 428 (443)
+||+.|+.++++. |.|+.+... ++..+.++|.++|.+++.+ +.||+++.++++.+.+ ++++.+..+.+.
T Consensus 313 p~~~~q~~~a~~~~~~-g~g~~~~~~-~~~~~~~~l~~ai~~ll~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 384 (391)
T 3tsa_A 313 PQYFDQFDYARNLAAA-GAGICLPDE-QAQSDHEQFTDSIATVLGD-TGFAAAAIKLSDEITA----MPHPAALVRTLE 384 (391)
T ss_dssp CCSTTHHHHHHHHHHT-TSEEECCSH-HHHTCHHHHHHHHHHHHTC-THHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHc-CCEEecCcc-cccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHc----CCCHHHHHHHHH
Confidence 8999999999988 999988710 0247899999999999999 8999999999988864 444555554443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.86 E-value=8.4e-20 Score=181.13 Aligned_cols=329 Identities=15% Similarity=0.127 Sum_probs=202.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCC-------------CCC
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFP-------------SHP 73 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~-------------~~~ 73 (443)
.++|||++++.++.||++|++.|+++|.++||+|+++++....+.+.. .++.+..++.. ...
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-----LGFEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-----cCCceeecCcccccchhhhhhhhhccc
Confidence 567999999999999999999999999999999999998755444443 67888877520 000
Q ss_pred CCCCCcccccccCCCChHHHHHH-HhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEechhHHHHHHH
Q 044731 74 SVPAGVENVKELGNRGNLPIMSA-LGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFFSSGSFLASVS 152 (443)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~ 152 (443)
..+. ......+. .....+... ...+...+.+++++. +||+||+|....++..+|+.+|+|+|.+.......
T Consensus 93 ~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~---- 164 (412)
T 3otg_A 93 SPEG-LTPEQLSE-LPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP---- 164 (412)
T ss_dssp CCTT-CCHHHHTT-SHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC----
T ss_pred CCcc-CChhHhhH-HHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccCc----
Confidence 0000 00000000 111112222 223345667777887 89999999776677788999999988754331100
Q ss_pred hhhhcccCCCCCCCceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhh----------hhccCccEEEEcC
Q 044731 153 DYCWNHTGVVKSLDVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVA----------NTLSWGWGCVFNS 222 (443)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~n~ 222 (443)
+ ... ..+.+.+.+.... ...++. ++..+
T Consensus 165 ---------------------~-----------~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~d~--~i~~~ 202 (412)
T 3otg_A 165 ---------------------D-----------DLT--------RSIEEEVRGLAQRLGLDLPPGRIDGFGNP--FIDIF 202 (412)
T ss_dssp ---------------------S-----------HHH--------HHHHHHHHHHHHHTTCCCCSSCCGGGGCC--EEECS
T ss_pred ---------------------h-----------hhh--------HHHHHHHHHHHHHcCCCCCcccccCCCCe--EEeeC
Confidence 0 000 0011111111100 112333 44444
Q ss_pred chhhhHHHHHHHHHhcCCCceeeeccccCCCCCCCCCCCCCCCCccccccc-cCCCCCCcEEEEecCCCccCCHHHHHHH
Q 044731 223 FDDLESEYLDYLKRKMGHDRVFGVGPLSLLGPESTRGGDSGLDPNDNVSKW-LDGCPDGSVVYACFGSQKVLSKEQMEAL 301 (443)
Q Consensus 223 ~~~l~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~w-Ld~~~~~~vVyvSfGS~~~~~~~~~~~i 301 (443)
...++.. +.... ....++.+.... .. ....+| ....+++++||+++||......+.+.++
T Consensus 203 ~~~~~~~-----~~~~~-~~~~~~~~~~~~------------~~-~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 203 PPSLQEP-----EFRAR-PRRHELRPVPFA------------EQ-GDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp CGGGSCH-----HHHTC-TTEEECCCCCCC------------CC-CCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred CHHhcCC-----cccCC-CCcceeeccCCC------------CC-CCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 3333321 11121 122222211110 01 233456 2223456799999999975667788899
Q ss_pred HHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCceEeecCCCc-----------------------------
Q 044731 302 ALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRGLVLKGWVPQ----------------------------- 352 (443)
Q Consensus 302 ~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ----------------------------- 352 (443)
+++|.+.+..++|....+... .....++ ++..+. +|+|+
T Consensus 264 ~~~l~~~~~~~~~~~g~~~~~---~~l~~~~--------~~v~~~-~~~~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~ 331 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSLDV---SGLGEVP--------ANVRLE-SWVPQAALLPHVDLVVHHGGSGTTLGALGAGVPQ 331 (412)
T ss_dssp HHHHHTSSSEEEEECCSSCCC---TTCCCCC--------TTEEEE-SCCCHHHHGGGCSEEEESCCHHHHHHHHHHTCCE
T ss_pred HHHHHcCCCEEEEEECCCCCh---hhhccCC--------CcEEEe-CCCCHHHHHhcCcEEEECCchHHHHHHHHhCCCE
Confidence 999998888999988764311 1111222 234454 88876
Q ss_pred ------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 044731 353 ------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLET 426 (443)
Q Consensus 353 ------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~ 426 (443)
+||..|+..+++. |.|+.+.. +.++.++|.++|.+++.+ +.+++++.+.++.+.+ ..+..+.++.
T Consensus 332 v~~p~~~~q~~~~~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~ 402 (412)
T 3otg_A 332 LSFPWAGDSFANAQAVAQA-GAGDHLLP---DNISPDSVSGAAKRLLAE-ESYRAGARAVAAEIAA----MPGPDEVVRL 402 (412)
T ss_dssp EECCCSTTHHHHHHHHHHH-TSEEECCG---GGCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHH----SCCHHHHHTT
T ss_pred EecCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhc----CCCHHHHHHH
Confidence 8999999999988 99999985 678999999999999999 8999999999888865 3445555555
Q ss_pred HHHH
Q 044731 427 LVQE 430 (443)
Q Consensus 427 ~~~~ 430 (443)
+.+.
T Consensus 403 ~~~l 406 (412)
T 3otg_A 403 LPGF 406 (412)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.68 E-value=1.4e-14 Score=141.29 Aligned_cols=307 Identities=16% Similarity=0.097 Sum_probs=164.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCch--hhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLP--IVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~--~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
.+|+|..-++-||++|.++||++|.++||+|+|+++....+ .+.. .++.+..++.. ++.. . ...
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~---~~~~-~-~~~---- 68 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVS---GLRG-K-GLK---- 68 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG-----GTCCEEECC-------------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh-----cCCcEEEEECC---CcCC-C-CHH----
Confidence 47888887777999999999999999999999999765321 2222 56777766531 1111 0 000
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchH--HHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCC
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWT--LNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSL 165 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~--~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (443)
..+.........+ ....+++++. +||+||.+..+.+. ..+|..+|+|++..-..
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n--------------------- 124 (365)
T 3s2u_A 69 SLVKAPLELLKSL-FQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN--------------------- 124 (365)
T ss_dssp ----CHHHHHHHH-HHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS---------------------
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc---------------------
Confidence 1111111111111 2334567777 99999999765543 35678889998754210
Q ss_pred CceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHhcCCCceee
Q 044731 166 DVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFG 245 (443)
Q Consensus 166 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~ 245 (443)
.+||+ ..+++ .+.++ .++..+++..+. . .+++.
T Consensus 125 ---~~~G~-------------------------~nr~l------~~~a~---~v~~~~~~~~~~---------~-~k~~~ 157 (365)
T 3s2u_A 125 ---AVAGT-------------------------ANRSL------APIAR---RVCEAFPDTFPA---------S-DKRLT 157 (365)
T ss_dssp ---SSCCH-------------------------HHHHH------GGGCS---EEEESSTTSSCC-------------CEE
T ss_pred ---hhhhh-------------------------HHHhh------ccccc---eeeecccccccC---------c-CcEEE
Confidence 00110 00100 11122 223333322110 1 35666
Q ss_pred eccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCC----CceEEEEeCCcc
Q 044731 246 VGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKSG----IRFLWVVKTSVI 321 (443)
Q Consensus 246 vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~~----~~~lw~~~~~~~ 321 (443)
+|..+..... . . ..-...++ +++.++++..||..... ..+.+.+++..++ ..++|..+.+.
T Consensus 158 ~g~pvr~~~~-------~-~--~~~~~~~~--~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~- 222 (365)
T 3s2u_A 158 TGNPVRGELF-------L-D--AHARAPLT--GRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH- 222 (365)
T ss_dssp CCCCCCGGGC-------C-C--TTSSCCCT--TSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT-
T ss_pred ECCCCchhhc-------c-c--hhhhcccC--CCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc-
Confidence 7744432211 0 0 11111222 34568888889876432 2234556666543 34555544321
Q ss_pred ccCCCCCCCCchhHH---HHhhcCceEeecCCCc----------------------------------------ccchhh
Q 044731 322 HAEGNGYGLIPYGFE---ERVAGRGLVLKGWVPQ----------------------------------------ADQFVN 358 (443)
Q Consensus 322 ~~~~~~~~~lp~~~~---~~~~~~~~vv~~W~PQ----------------------------------------~DQ~~n 358 (443)
.+... ...+.+..+. +|+++ .+|..|
T Consensus 223 ----------~~~~~~~~~~~~~~~~v~-~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~N 291 (365)
T 3s2u_A 223 ----------AEITAERYRTVAVEADVA-PFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRN 291 (365)
T ss_dssp ----------HHHHHHHHHHTTCCCEEE-SCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHH
T ss_pred ----------cccccceecccccccccc-cchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHH
Confidence 11222 2233445555 77776 689999
Q ss_pred HHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccc
Q 044731 359 ARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRF 436 (443)
Q Consensus 359 a~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~ 436 (443)
|+.+++. |.|+.+.. ..+|.++|.++|.+++.| +..+++ +++..++. ....++.+-++.+++-..+.+-
T Consensus 292 A~~l~~~-G~a~~l~~---~~~~~~~L~~~i~~ll~d-~~~~~~---m~~~a~~~-~~~~aa~~ia~~i~~larG~e~ 360 (365)
T 3s2u_A 292 AEFLVRS-GAGRLLPQ---KSTGAAELAAQLSEVLMH-PETLRS---MADQARSL-AKPEATRTVVDACLEVARGLEH 360 (365)
T ss_dssp HHHHHTT-TSEEECCT---TTCCHHHHHHHHHHHHHC-THHHHH---HHHHHHHT-CCTTHHHHHHHHHHHHC-----
T ss_pred HHHHHHC-CCEEEeec---CCCCHHHHHHHHHHHHCC-HHHHHH---HHHHHHhc-CCccHHHHHHHHHHHHHccchh
Confidence 9999998 99999985 789999999999999999 665544 33333332 2334444444444444444443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.54 E-value=2.3e-14 Score=124.04 Aligned_cols=126 Identities=19% Similarity=0.229 Sum_probs=100.2
Q ss_pred CCccccccccCCCCCCcEEEEecCCCc-cCCHHHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhhcCc
Q 044731 265 DPNDNVSKWLDGCPDGSVVYACFGSQK-VLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVAGRG 343 (443)
Q Consensus 265 ~~~~~l~~wLd~~~~~~vVyvSfGS~~-~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 343 (443)
.+ +++.+|++..+++++||++|||.. ..+.+.+..++++|.+.+.+++|+.+.... ..+| .+.
T Consensus 7 l~-~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-------~~~~--------~~v 70 (170)
T 2o6l_A 7 LP-KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-------DTLG--------LNT 70 (170)
T ss_dssp CC-HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-------TTCC--------TTE
T ss_pred CC-HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-------ccCC--------CcE
Confidence 45 789999987666789999999986 457788899999999888999998865421 1232 234
Q ss_pred eEeecCCCc-------------------------------------ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHH
Q 044731 344 LVLKGWVPQ-------------------------------------ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELG 386 (443)
Q Consensus 344 ~vv~~W~PQ-------------------------------------~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~ 386 (443)
.+. +|+|| +||..||+++++. |+|+.+.. +.++.++|.
T Consensus 71 ~~~-~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~---~~~~~~~l~ 145 (170)
T 2o6l_A 71 RLY-KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF---NTMSSTDLL 145 (170)
T ss_dssp EEE-SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT---TTCCHHHHH
T ss_pred EEe-cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc---ccCCHHHHH
Confidence 455 88887 7999999999887 99999985 678999999
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHH
Q 044731 387 KVIGESLSQCGETKIKARELRDKALA 412 (443)
Q Consensus 387 ~ai~~vl~~~~~yr~~a~~l~~~~r~ 412 (443)
++|.+++.+ +.||++++++++.+|+
T Consensus 146 ~~i~~ll~~-~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 146 NALKRVIND-PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHHHC-HHHHHHHHHHC-----
T ss_pred HHHHHHHcC-HHHHHHHHHHHHHhhC
Confidence 999999999 8999999999999874
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.14 E-value=7.2e-09 Score=100.24 Aligned_cols=305 Identities=14% Similarity=0.077 Sum_probs=165.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCch--hhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLP--IVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~--~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
++|++++.+..||..++..|+++|+++||+|++++...... .+.. .++.+..++.. .+... .....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~---~~~~~-~~~~~--- 74 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK-----HGIEIDFIRIS---GLRGK-GIKAL--- 74 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCC---CCTTC-CHHHH---
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc-----cCCceEEecCC---ccCcC-ccHHH---
Confidence 79999987777999999999999999999999999765321 1221 46777766532 11110 00000
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCceeEechhHHHHHHHhhhhcccCCCCCC
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLG--WTLNLARELNIVRITFFSSGSFLASVSDYCWNHTGVVKSL 165 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (443)
+...... ......+.+++++. +||+|+++.... .+..++..+|+|+|......
T Consensus 75 --~~~~~~~-~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------------------- 129 (364)
T 1f0k_A 75 --IAAPLRI-FNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG-------------------- 129 (364)
T ss_dssp --HTCHHHH-HHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS--------------------
T ss_pred --HHHHHHH-HHHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC--------------------
Confidence 0001111 11223455666776 899999986442 34456778899987432110
Q ss_pred CceecCCCCCCCcccCCCCChhhhhccCCCCChHHHHHHHHHhhhhccCccEEEEcCchhhhHHHHHHHHHhcCCCceee
Q 044731 166 DVVEFRDLPRSPVFKEEHLPTVFRIYMVSDSDPEFEFVKDGMVANTLSWGWGCVFNSFDDLESEYLDYLKRKMGHDRVFG 245 (443)
Q Consensus 166 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~~~~~~~v~~ 245 (443)
++ .....+ ..+.++. +++.+ ... + +++..
T Consensus 130 -------~~----------------------~~~~~~------~~~~~d~--v~~~~-~~~-----------~--~~~~~ 158 (364)
T 1f0k_A 130 -------IA----------------------GLTNKW------LAKIATK--VMQAF-PGA-----------F--PNAEV 158 (364)
T ss_dssp -------SC----------------------CHHHHH------HTTTCSE--EEESS-TTS-----------S--SSCEE
T ss_pred -------CC----------------------cHHHHH------HHHhCCE--EEecC-hhh-----------c--CCceE
Confidence 00 000000 1122333 44433 211 1 23444
Q ss_pred eccccCCCCCCCCCCCCCCCCccccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhC--CCceEEEEeCCcccc
Q 044731 246 VGPLSLLGPESTRGGDSGLDPNDNVSKWLDGCPDGSVVYACFGSQKVLSKEQMEALALGLEKS--GIRFLWVVKTSVIHA 323 (443)
Q Consensus 246 vGpl~~~~~~~~~~~~~~~~~~~~l~~wLd~~~~~~vVyvSfGS~~~~~~~~~~~i~~al~~~--~~~~lw~~~~~~~~~ 323 (443)
||.-+....- . .+ . ....+...++..++++..|+... .+....+++++..+ +.+++|.++.+.
T Consensus 159 i~n~v~~~~~-------~-~~-~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--- 223 (364)
T 1f0k_A 159 VGNPVRTDVL-------A-LP-L-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--- 223 (364)
T ss_dssp CCCCCCHHHH-------T-SC-C-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC---
T ss_pred eCCccchhhc-------c-cc-h-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch---
Confidence 4422210000 0 00 0 00111111234567777778753 34445555666654 345566555431
Q ss_pred CCCCCCCCchhHHHHh---h-cCceEeecCCCc---------------------------------------ccchhhHH
Q 044731 324 EGNGYGLIPYGFEERV---A-GRGLVLKGWVPQ---------------------------------------ADQFVNAR 360 (443)
Q Consensus 324 ~~~~~~~lp~~~~~~~---~-~~~~vv~~W~PQ---------------------------------------~DQ~~na~ 360 (443)
.+.+.+.+ + .+..+. +|+++ .||..|++
T Consensus 224 --------~~~l~~~~~~~~~~~v~~~-g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~ 294 (364)
T 1f0k_A 224 --------QQSVEQAYAEAGQPQHKVT-EFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNAL 294 (364)
T ss_dssp --------HHHHHHHHHHTTCTTSEEE-SCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHH
T ss_pred --------HHHHHHHHhhcCCCceEEe-cchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHH
Confidence 12222222 2 243444 78755 48999999
Q ss_pred HHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcccc
Q 044731 361 LLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFH 437 (443)
Q Consensus 361 ~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~ 437 (443)
.+.+. |.|..++. +..+.+++.++|.++ + +..+++..+-+..+ .+..+..+..+.+.+.+.+.++|
T Consensus 295 ~~~~~-g~g~~~~~---~d~~~~~la~~i~~l--~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~y~~~~~~ 360 (364)
T 1f0k_A 295 PLEKA-GAAKIIEQ---PQLSVDAVANTLAGW--S-RETLLTMAERARAA----SIPDATERVANEVSRVARALEHH 360 (364)
T ss_dssp HHHHT-TSEEECCG---GGCCHHHHHHHHHTC--C-HHHHHHHHHHHHHT----CCTTHHHHHHHHHHHHHTTC---
T ss_pred HHHhC-CcEEEecc---ccCCHHHHHHHHHhc--C-HHHHHHHHHHHHHh----hccCHHHHHHHHHHHHHHHHHhh
Confidence 99988 99998875 567799999999998 6 67766554444333 23455666667777766666654
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.97 E-value=0.0052 Score=60.23 Aligned_cols=120 Identities=10% Similarity=0.112 Sum_probs=65.6
Q ss_pred CCCcEEEEEcC---C--------CCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhh-hhccCCCCeeEEEeCCCCCCC
Q 044731 7 SRATHVLIFPY---P--------AQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVS-SLLDARPAIQTLVLPFPSHPS 74 (443)
Q Consensus 7 ~~~~~ili~~~---~--------~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~-~~~~~~~~i~~~~l~~~~~~~ 74 (443)
.++|+|++++. | .-|+-.....|+++|+++||+|++++......... ... ..+++++.++......
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~--~~~v~v~~~~~~~~~~ 95 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRV--AENLRVINIAAGPYEG 95 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEE--ETTEEEEEECCSCSSS
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccc--cCCeEEEEecCCCccc
Confidence 35789999985 2 35788899999999999999999998754321100 000 1467777665321000
Q ss_pred CCCCcccccccCCCChHHHHHHHhhhhHHHHHH-HHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCceeEe
Q 044731 75 VPAGVENVKELGNRGNLPIMSALGKLYDPIIQW-FHSHANPPVAILSDFFLG--WTLNLARELNIVRITFF 142 (443)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-l~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~~ 142 (443)
.+ .. .....+.. +...+.++ ++... +||+|++..... .+..++..+++|+|...
T Consensus 96 ~~-----~~----~~~~~~~~----~~~~~~~~~~~~~~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~ 152 (438)
T 3c48_A 96 LS-----KE----ELPTQLAA----FTGGMLSFTRREKV-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTA 152 (438)
T ss_dssp CC-----GG----GGGGGHHH----HHHHHHHHHHHHTC-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred cc-----hh----HHHHHHHH----HHHHHHHHHHhccC-CCCEEEeCCccHHHHHHHHHHHcCCCEEEEe
Confidence 00 00 11111111 11112222 44331 499998875322 23346777899987653
No 24
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.79 E-value=0.016 Score=56.44 Aligned_cols=40 Identities=15% Similarity=0.302 Sum_probs=31.9
Q ss_pred CCcEEEEEcCC-----CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 8 RATHVLIFPYP-----AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 8 ~~~~ili~~~~-----~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
++|+|++++.. .-|--.-+..|+++|+++||+|+++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 46899998842 34555678999999999999999999643
No 25
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.68 E-value=0.02 Score=55.19 Aligned_cols=113 Identities=9% Similarity=0.036 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCC---C-CCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccc
Q 044731 7 SRATHVLIFPYP---A-QGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENV 82 (443)
Q Consensus 7 ~~~~~ili~~~~---~-~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 82 (443)
.++|+|+++... . .|+-.-...++++|+++||+|++++............. ..+ .+..++. .. ..
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~~-~~~~~~~------~~---~~ 86 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV-SGG-KAVPIPY------NG---SV 86 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE-ECC-CCC-----------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc-cCC-cEEeccc------cC---Cc
Confidence 347899998742 2 46668899999999999999999997543211111000 001 1111110 00 00
Q ss_pred cccCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcch--HHHHHHHhCCCceeE
Q 044731 83 KELGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGW--TLNLARELNIVRITF 141 (443)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~--~~~vA~~lgiP~i~~ 141 (443)
... ... ......+.+++++. +||+|++...... +..++..+++|+|..
T Consensus 87 ~~~--~~~-------~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~ 136 (406)
T 2gek_A 87 ARL--RFG-------PATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVAT 136 (406)
T ss_dssp ------CC-------HHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEE
T ss_pred ccc--ccc-------HHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEE
Confidence 000 000 11223455666766 8999998764442 345666679998764
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.38 E-value=0.11 Score=49.74 Aligned_cols=106 Identities=9% Similarity=0.045 Sum_probs=65.4
Q ss_pred CcEEEEEcC--C--CCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccc
Q 044731 9 ATHVLIFPY--P--AQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKE 84 (443)
Q Consensus 9 ~~~ili~~~--~--~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 84 (443)
+++|++++. + .-|+-.-+..|++.| +||+|++++............ ...++.+..++... .
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~-------- 68 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-KTLDYEVIRWPRSV----M-------- 68 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-TTCSSEEEEESSSS----C--------
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-cccceEEEEccccc----c--------
Confidence 467888764 2 357778888999999 799999999866432111111 02567777665210 0
Q ss_pred cCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCCceeE
Q 044731 85 LGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLG--WTLNLARELNIVRITF 141 (443)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~ 141 (443)
+ ... .....+.+++++. +||+|++..... ....++..+|+|.+.+
T Consensus 69 ~--~~~--------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 69 L--PTP--------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp C--SCH--------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred c--cch--------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 0 001 1223456677777 899999875444 3445678889985443
No 27
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.76 E-value=0.41 Score=45.75 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=60.6
Q ss_pred CcEEEEEcCCCC-CChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCC
Q 044731 9 ATHVLIFPYPAQ-GHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 9 ~~~ili~~~~~~-gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
++.+....+|.. |.-.-...|+++|+++||+|++++...... ... . ..++.+..++... .+. . .
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-~--~~~i~~~~~~~~~---~~~----~---~- 79 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-V--YPNIYFHEVTVNQ---YSV----F---Q- 79 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-C--CTTEEEECCCCC-----------C---C-
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-c--CCceEEEeccccc---ccc----c---c-
Confidence 456777777754 566888899999999999999998753211 111 0 2456666543210 010 0 0
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcch--HHHHHHHh---CCCceeE
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGW--TLNLAREL---NIVRITF 141 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~--~~~vA~~l---giP~i~~ 141 (443)
.....+ .....+.+++++. +||+|++...... ...++..+ ++|+|..
T Consensus 80 ~~~~~~-----~~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~ 131 (394)
T 2jjm_A 80 YPPYDL-----ALASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTT 131 (394)
T ss_dssp SCCHHH-----HHHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEE
T ss_pred cccccH-----HHHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEE
Confidence 000011 1123345566666 8999998754432 23344443 4887654
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=96.30 E-value=0.093 Score=51.01 Aligned_cols=112 Identities=12% Similarity=0.120 Sum_probs=58.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhhhccCCCCeeE-EEeCCCCCCCCCCCccccccc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSSLLDARPAIQT-LVLPFPSHPSVPAGVENVKEL 85 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~ 85 (443)
+++|++++ ++++.+.=+..|.++|.++ |+++.++.|....+....... ..++.. ..+. +...
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~-~~~i~~~~~l~------v~~~------- 91 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLE-IFDIKPDIDLD------IMKK------- 91 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHH-HTTCCCSEECC------CCC--------
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHH-hcCCCCCcccc------cCCC-------
Confidence 35776655 6666777789999999997 688776655322111111000 022210 0010 0000
Q ss_pred CCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCC--Ccch-HHHHHHHhCCCceeE
Q 044731 86 GNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDF--FLGW-TLNLARELNIVRITF 141 (443)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~--~~~~-~~~vA~~lgiP~i~~ 141 (443)
. . ............+.+++++. +||+|++-. ...+ +..+|..+|||++.+
T Consensus 92 ~-~---~~~~~~~~~~~~l~~~l~~~--kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 92 G-Q---TLAEITSRVMNGINEVIAAE--NPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp C-C---CHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred C-C---CHHHHHHHHHHHHHHHHHHc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 0 0 11111223345566777887 999998742 2223 356788899997644
No 29
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.16 E-value=0.016 Score=58.05 Aligned_cols=126 Identities=12% Similarity=0.130 Sum_probs=66.2
Q ss_pred CCCCCCCCCcEEEEEcCC---------------CCCChHHHHHHHHHHHhCCceEEEEeCCCCchh---hhhhcc---CC
Q 044731 1 MSSCSNSRATHVLIFPYP---------------AQGHMLPLLDLTHQLSLKNLDITILITPKNLPI---VSSLLD---AR 59 (443)
Q Consensus 1 ~~~~~~~~~~~ili~~~~---------------~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~---v~~~~~---~~ 59 (443)
|..|+. +|||+++... .-|.-..+..|+++|+++||+|++++....... ...... ..
T Consensus 1 m~~m~~--~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~ 78 (499)
T 2r60_A 1 MVEMTR--IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQET 78 (499)
T ss_dssp --------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTC
T ss_pred Cccccc--cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCC
Confidence 444442 4799998752 246678899999999999999999986443211 100000 01
Q ss_pred CCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHhCCC
Q 044731 60 PAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLG--WTLNLARELNIV 137 (443)
Q Consensus 60 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP 137 (443)
.+++++.++... ....... .....+.. ....+.+++++...+||+|.+..... .+..++..+|+|
T Consensus 79 ~gv~v~~~~~~~-----~~~~~~~----~~~~~~~~----~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p 145 (499)
T 2r60_A 79 NKVRIVRIPFGG-----DKFLPKE----ELWPYLHE----YVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLP 145 (499)
T ss_dssp SSEEEEEECCSC-----SSCCCGG----GCGGGHHH----HHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEEecCCC-----cCCcCHH----HHHHHHHH----HHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCc
Confidence 467777765321 0000000 11111111 11234445554211799998875332 223466778999
Q ss_pred ceeE
Q 044731 138 RITF 141 (443)
Q Consensus 138 ~i~~ 141 (443)
+|..
T Consensus 146 ~v~~ 149 (499)
T 2r60_A 146 FTFT 149 (499)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 30
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=95.90 E-value=1.2 Score=41.93 Aligned_cols=46 Identities=13% Similarity=0.219 Sum_probs=34.1
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKAR 404 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~ 404 (443)
.|...+...+.+. +.|..+. ..-+.+++.++|.+++.+ +..+++..
T Consensus 300 ~~~~~~~e~i~~~-~~g~~~~----~~~~~~~l~~~i~~l~~~-~~~~~~~~ 345 (374)
T 2iw1_A 300 TAVCGYAHYIADA-NCGTVIA----EPFSQEQLNEVLRKALTQ-SPLRMAWA 345 (374)
T ss_dssp ETTSTTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHHHHHC-HHHHHHHH
T ss_pred ecCCCchhhhccC-CceEEeC----CCCCHHHHHHHHHHHHcC-hHHHHHHH
Confidence 6777777777766 7787775 234789999999999998 56554433
No 31
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=95.46 E-value=0.034 Score=49.22 Aligned_cols=31 Identities=19% Similarity=0.068 Sum_probs=24.7
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGES 392 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~v 392 (443)
.||..||+++++. |.|+.+ +.++|.++|+++
T Consensus 166 ~HQ~~nA~~l~~~-G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 166 NHQQQIADKFVEL-GYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp CHHHHHHHHHHHH-SCCCEE--------CSCTTTHHHHHH
T ss_pred chHHHHHHHHHHC-CCEEEc--------CHHHHHHHHHHH
Confidence 4699999999988 988654 446777888877
No 32
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=93.75 E-value=0.27 Score=46.70 Aligned_cols=112 Identities=12% Similarity=-0.062 Sum_probs=59.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhC-CceEEEEeCCCCchhhhhhccCCCCeeE-EEeCCCCCCCCCCCcccccccC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLK-NLDITILITPKNLPIVSSLLDARPAIQT-LVLPFPSHPSVPAGVENVKELG 86 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~v~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~~ 86 (443)
+++|++++.. .++......|+++|.++ ||+|.++.+............ ..++.+ ..++. .. ...
T Consensus 5 mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~--~~~---- 70 (376)
T 1v4v_A 5 MKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-LFGIQEDRNLDV------MQ--ERQ---- 70 (376)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-TTTCCCSEECCC------CS--SCC----
T ss_pred ceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-HcCCCccccccc------CC--CCc----
Confidence 3789888743 33345567889999998 899887766443222111111 123322 12211 00 000
Q ss_pred CCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCC--Ccch-HHHHHHHhCCCceeE
Q 044731 87 NRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDF--FLGW-TLNLARELNIVRITF 141 (443)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~--~~~~-~~~vA~~lgiP~i~~ 141 (443)
.....+ ......+.+++++. +||+|++.. ...+ +..+|..+|+|++.+
T Consensus 71 -~~~~~~----~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~ 121 (376)
T 1v4v_A 71 -ALPDLA----ARILPQAARALKEM--GADYVLVHGDTLTTFAVAWAAFLEGIPVGHV 121 (376)
T ss_dssp -CHHHHH----HHHHHHHHHHHHHT--TCSEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred -cHHHHH----HHHHHHHHHHHHHc--CCCEEEEeCChHHHHHHHHHHHHhCCCEEEE
Confidence 001111 11223456677777 899999843 2223 345778889997643
No 33
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.90 E-value=0.1 Score=52.75 Aligned_cols=46 Identities=13% Similarity=0.118 Sum_probs=31.1
Q ss_pred CCCCCCCCCcEEEEEcC---CC---CCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 1 MSSCSNSRATHVLIFPY---PA---QGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 1 ~~~~~~~~~~~ili~~~---~~---~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
||..++.++||||+++. |. -|=-.....|.++|+++||+|+++++.
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 78888888999999974 32 233356789999999999999999964
No 34
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=92.64 E-value=0.22 Score=47.41 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=58.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCc-eEEEEeCCCCchhhhhhccCCCCeeE-EEeCCCCCCCCCCCcccccccCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNL-DITILITPKNLPIVSSLLDARPAIQT-LVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh-~Vt~~t~~~~~~~v~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
|+|++++. ..++...+.+|+++|.++|+ ++.++.+............ ..++.+ ..++. ... .
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~--~------ 64 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLK-LFSIVPDYDLNI------MQP--G------ 64 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHH-HHTCCCSEECCC------CST--T------
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHH-HcCCCCCcceec------CCC--C------
Confidence 47877653 45778888999999999995 8876554332111111110 012322 22221 000 0
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCC--cch-HHHHHHHhCCCceeE
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFF--LGW-TLNLARELNIVRITF 141 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~--~~~-~~~vA~~lgiP~i~~ 141 (443)
.. ...........+.+++++. +||+|++... ..+ +..+|..+|+|+|..
T Consensus 65 ~~---~~~~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~ 116 (384)
T 1vgv_A 65 QG---LTEITCRILEGLKPILAEF--KPDVVLVHGDTTTTLATSLAAFYQRIPVGHV 116 (384)
T ss_dssp SC---HHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHTTTCCEEEE
T ss_pred cc---HHHHHHHHHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEE
Confidence 00 1111112234456677777 8999988532 223 344567789997654
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=92.55 E-value=0.12 Score=48.52 Aligned_cols=39 Identities=18% Similarity=0.194 Sum_probs=31.9
Q ss_pred CcEEEEEcCC----------------CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 9 ATHVLIFPYP----------------AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 9 ~~~ili~~~~----------------~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+++|+++... .-|.-.-...|++.|+++||+|++++...
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 4788888765 24667788999999999999999998754
No 36
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=92.09 E-value=0.36 Score=51.15 Aligned_cols=125 Identities=15% Similarity=0.164 Sum_probs=64.3
Q ss_pred CcEEEEEcCCCC-------------CChHHHH--------HHHHHHHhCCceEE----EEeCCCCch-------hhhhhc
Q 044731 9 ATHVLIFPYPAQ-------------GHMLPLL--------DLTHQLSLKNLDIT----ILITPKNLP-------IVSSLL 56 (443)
Q Consensus 9 ~~~ili~~~~~~-------------gH~~P~l--------~La~~L~~rGh~Vt----~~t~~~~~~-------~v~~~~ 56 (443)
..+|+++...+. |+..=.+ .||++|+++||+|| ++|...... ..+. .
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~-i 356 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLER-V 356 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEE-C
T ss_pred eeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCccee-e
Confidence 468888887664 3333333 58888899999998 777532211 1111 0
Q ss_pred cCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcc--hHHHHHHHh
Q 044731 57 DARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLG--WTLNLAREL 134 (443)
Q Consensus 57 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~--~~~~vA~~l 134 (443)
....+++++.+|+.+.+++...+-... ..+..+.... ...+..++.....+||+|.+..... .+..++..+
T Consensus 357 ~~~~gv~I~RvP~~~~~g~l~~~l~k~----~L~~~L~~F~---~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~ 429 (816)
T 3s28_A 357 YDSEYCDILRVPFRTEKGIVRKWISRF----EVWPYLETYT---EDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKL 429 (816)
T ss_dssp TTCSSEEEEEECEEETTEEECSCCCTT----TCGGGHHHHH---HHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHH
T ss_pred cCcCCeEEEEecCCCccccccccccHH----HHHHHHHHHH---HHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHc
Confidence 001477887777532111000000000 1222222111 1233344444334899998764222 245678889
Q ss_pred CCCceeE
Q 044731 135 NIVRITF 141 (443)
Q Consensus 135 giP~i~~ 141 (443)
|+|+|..
T Consensus 430 gvP~V~T 436 (816)
T 3s28_A 430 GVTQCTI 436 (816)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9998754
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=89.73 E-value=0.95 Score=42.69 Aligned_cols=111 Identities=10% Similarity=-0.015 Sum_probs=59.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhC-C-ceEEEEeCCCCchhhhhhccCCCCeeE-EEeCCCCCCCCCCCccccccc
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLK-N-LDITILITPKNLPIVSSLLDARPAIQT-LVLPFPSHPSVPAGVENVKEL 85 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~r-G-h~Vt~~t~~~~~~~v~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~ 85 (443)
+|+|++++ .+.++......++++|+++ | |+|.++++............ ..++.. ..++. ..+..
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~------ 74 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLS-IFGITPDFDLNI-----MKDRQ------ 74 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHH-HHTCCCSEECCC-----CCTTC------
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHH-HcCCCCcccccc-----CCCcc------
Confidence 47899887 3467778888999999987 5 88877776543222211100 012211 11110 00000
Q ss_pred CCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcch---HHHHHHHhCCCcee
Q 044731 86 GNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGW---TLNLARELNIVRIT 140 (443)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~---~~~vA~~lgiP~i~ 140 (443)
.....+ ......+.+++++. +||+|++...... +..++..+|+|+|.
T Consensus 75 --~~~~~~----~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~ 124 (375)
T 3beo_A 75 --TLIDIT----TRGLEGLDKVMKEA--KPDIVLVHGDTTTTFIASLAAFYNQIPVGH 124 (375)
T ss_dssp --CHHHHH----HHHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHHTTCCEEE
T ss_pred --cHHHHH----HHHHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEE
Confidence 000111 11223455667777 8999998543221 23466788999874
No 38
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=88.42 E-value=2.7 Score=37.60 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=28.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
+|||+.-==+. |.-=+..|+++|.+.|| |+++.+....+-..+
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g~-V~VvAP~~~~Sg~g~ 44 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLGR-VVVVAPDRNLSGVGH 44 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTSE-EEEEEESSCCTTSCC
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCCC-EEEEeeCCCCccccc
Confidence 35655543232 33446788899999985 999998776655443
No 39
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=88.41 E-value=1.6 Score=36.44 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=30.3
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHH-HHHHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGET-KIKARELR 407 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~y-r~~a~~l~ 407 (443)
.|...+...+.+. +.|..+ . -+.+++.++|.+++.+ +.+ ++++++.+
T Consensus 127 ~~~~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~-~~~~~~~~~~~a 174 (177)
T 2f9f_A 127 VNEGGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKN-PDKFKKDCFRRA 174 (177)
T ss_dssp ESSHHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHC-TTTTHHHHHHHH
T ss_pred eCCCCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhC-HHHHHHHHHHHH
Confidence 5666565555443 455555 2 2789999999999987 454 55555444
No 40
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=86.06 E-value=1.7 Score=41.74 Aligned_cols=113 Identities=16% Similarity=0.121 Sum_probs=60.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhC-CceEEEEeCCCCchhhhhhccCCCCee-EEEeCCCCCCCCCCCccccccc
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLK-NLDITILITPKNLPIVSSLLDARPAIQ-TLVLPFPSHPSVPAGVENVKEL 85 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~v~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~~ 85 (443)
++++|++++ ++++.+.=+.+|.++|.++ |+++.++.|....+....... ..++. -..+. +...
T Consensus 24 ~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~-~~~i~~~~~l~------~~~~------- 88 (396)
T 3dzc_A 24 AMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLE-LFSITPDFDLN------IMEP------- 88 (396)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHH-HTTCCCSEECC------CCCT-------
T ss_pred CCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH-hcCCCCceeee------cCCC-------
Confidence 345776655 7777888889999999987 788876655333221111000 02221 00110 0000
Q ss_pred CCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCC--Ccch-HHHHHHHhCCCceeE
Q 044731 86 GNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDF--FLGW-TLNLARELNIVRITF 141 (443)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~--~~~~-~~~vA~~lgiP~i~~ 141 (443)
. .............+.+++++. +||+|+.-. ...+ +..+|..+|||++.+
T Consensus 89 ~----~~~~~~~~~~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 89 G----QTLNGVTSKILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp T----CCHHHHHHHHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred C----CCHHHHHHHHHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 0 011112233445567777887 999998732 2223 346778889997644
No 41
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=85.34 E-value=0.55 Score=45.63 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=31.7
Q ss_pred CCCcEEEEEcCCCC-----CChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 7 SRATHVLIFPYPAQ-----GHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 7 ~~~~~ili~~~~~~-----gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.++++|+++..... |=.+....|+++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 46789988774322 333568899999999999999999754
No 42
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=85.08 E-value=6.1 Score=35.19 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=31.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
||||+.-==+. |.-=+..|+++|.+.| +|+++.+...++-..+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~ 44 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGH 44 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCC
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCcc
Confidence 56776654333 4455788999999988 9999999877655544
No 43
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=78.88 E-value=7.9 Score=35.95 Aligned_cols=45 Identities=18% Similarity=0.228 Sum_probs=37.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSS 54 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~ 54 (443)
++|+++....-|++.-..++.+.|.++ +.+|++++.+.+.+.+..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~ 47 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc
Confidence 479999988889999999999999986 999999998766554443
No 44
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=78.85 E-value=8.5 Score=36.11 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=66.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhhhccCCCCee-EEEeCCCCCCCCCCCcccccc
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSSLLDARPAIQ-TLVLPFPSHPSVPAGVENVKE 84 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~ 84 (443)
...+|+++-..+-|++.-.+++.+.|+++ +.+|++++.+.+.+.++. .+.++ ++.++. ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~----~p~vd~vi~~~~-------~~------ 69 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY----NPNIDELIVVDK-------KG------ 69 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS----CTTCSEEEEECC-------SS------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc----CCCccEEEEeCc-------cc------
Confidence 35689999999999999999999999986 999999998776655544 24454 443321 00
Q ss_pred cCCCChHHHHHHHhhhhHHHHHHHHhCCCCC-cEEEeCCCcchHHHHHHHhCCCce
Q 044731 85 LGNRGNLPIMSALGKLYDPIIQWFHSHANPP-VAILSDFFLGWTLNLARELNIVRI 139 (443)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-D~vI~D~~~~~~~~vA~~lgiP~i 139 (443)
....+ ..+...+.. +++. +| |++|.=....-...++...|+|..
T Consensus 70 ----~~~~~----~~~~~l~~~-Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~r 114 (349)
T 3tov_A 70 ----RHNSI----SGLNEVARE-INAK--GKTDIVINLHPNERTSYLAWKIHAPIT 114 (349)
T ss_dssp ----HHHHH----HHHHHHHHH-HHHH--CCCCEEEECCCSHHHHHHHHHHCCSEE
T ss_pred ----ccccH----HHHHHHHHH-HhhC--CCCeEEEECCCChHHHHHHHHhCCCeE
Confidence 00011 111222233 3444 79 998854443344567777899853
No 45
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=78.84 E-value=2.4 Score=40.63 Aligned_cols=41 Identities=10% Similarity=0.055 Sum_probs=32.9
Q ss_pred CCcEEEEEcCC--CCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 8 RATHVLIFPYP--AQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 8 ~~~~ili~~~~--~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
++++|+++... .-|+-..+..|++.|+++||+|++++....
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 35788887653 357888999999999999999999887543
No 46
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=77.16 E-value=2.5 Score=35.00 Aligned_cols=41 Identities=15% Similarity=0.096 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
++.+|++.+.++..|-....-++..|..+|++|.++.....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p 57 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQT 57 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 46799999999999999999999999999999998865443
No 47
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=76.38 E-value=3.6 Score=38.76 Aligned_cols=42 Identities=12% Similarity=0.050 Sum_probs=29.3
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIK 402 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~ 402 (443)
.|...+...+.+. |.|+.+. . +.++|.++|.+++.+ +..+++
T Consensus 307 ~~~~~~~~e~v~~-g~g~lv~----~--d~~~la~~i~~ll~d-~~~~~~ 348 (384)
T 1vgv_A 307 MRDTTERPEAVTA-GTVRLVG----T--DKQRIVEEVTRLLKD-ENEYQA 348 (384)
T ss_dssp ESSCCSCHHHHHH-TSEEEEC----S--SHHHHHHHHHHHHHC-HHHHHH
T ss_pred ccCCCCcchhhhC-CceEEeC----C--CHHHHHHHHHHHHhC-hHHHhh
Confidence 4553344445566 7777775 2 899999999999998 655543
No 48
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=74.82 E-value=3.2 Score=39.71 Aligned_cols=109 Identities=9% Similarity=0.089 Sum_probs=60.5
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCch-hhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChH
Q 044731 13 LIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLP-IVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNL 91 (443)
Q Consensus 13 li~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~-~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 91 (443)
+++-++++--+.=|.+|.++|.++ ++..++.|.-..+ .+....- .++. ++.+.. .+.. . ....
T Consensus 12 ~~~v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~--~~~~---i~~~~~-~l~~-----~--~~~~-- 75 (385)
T 4hwg_A 12 VMTIVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF--DDMG---IRKPDY-FLEV-----A--ADNT-- 75 (385)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH--C-CC---CCCCSE-ECCC-----C--CCCS--
T ss_pred eeEEEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH--hhCC---CCCCce-ecCC-----C--CCCH--
Confidence 344578888899999999999888 8888877653322 2222100 1111 110000 0110 0 0011
Q ss_pred HHHHHHhhhhHHHHHHHHhCCCCCcEEEeC--CCcchHHHHHHHhCCCceeE
Q 044731 92 PIMSALGKLYDPIIQWFHSHANPPVAILSD--FFLGWTLNLARELNIVRITF 141 (443)
Q Consensus 92 ~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D--~~~~~~~~vA~~lgiP~i~~ 141 (443)
......+...+.+++++. +||+|+.- ....++...|.++|||++.+
T Consensus 76 --~~~~~~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 --AKSIGLVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp --HHHHHHHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred --HHHHHHHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 122223445667777877 99988763 33445566788999996544
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=73.41 E-value=2.6 Score=41.29 Aligned_cols=38 Identities=18% Similarity=0.072 Sum_probs=29.3
Q ss_pred cEEEEEcCCC------CCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYPA------QGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~~------~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|+|++++... -|=-.-+..|+++|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 5788876522 2445778899999999999999999643
No 50
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=73.26 E-value=6.6 Score=35.75 Aligned_cols=92 Identities=16% Similarity=0.155 Sum_probs=55.2
Q ss_pred cEEEEEcCC----CCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccccccc
Q 044731 10 THVLIFPYP----AQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKEL 85 (443)
Q Consensus 10 ~~ili~~~~----~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 85 (443)
|+|+|-+=+ +.||+.=.+.||++|. +|+|++.......++. .++.+..++ .
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~-----~g~~v~~l~--------~-------- 55 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE-----IPYPVYELS--------S-------- 55 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG-----CCSCEEECS--------S--------
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH-----CCCeEEEcC--------c--------
Confidence 346665433 5799999999999999 7999986543222222 234444332 0
Q ss_pred CCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchH-H--HHHHHhCCCceeE
Q 044731 86 GNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWT-L--NLARELNIVRITF 141 (443)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~-~--~vA~~lgiP~i~~ 141 (443)
.. .+.+.+++++. ++|++|.|...... + .+....+++++.+
T Consensus 56 --~d-----------~~~~~~~l~~~--~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~i 99 (282)
T 3hbm_A 56 --ES-----------IYELINLIKEE--KFELLIIDHYGISVDDEKLIKLETGVKILSF 99 (282)
T ss_dssp --SC-----------HHHHHHHHHHH--TCSEEEEECTTCCHHHHHHHHHHHCCEEEEE
T ss_pred --cC-----------HHHHHHHHHhC--CCCEEEEECCCCCHHHHHHHHHhcCcEEEEE
Confidence 00 01234555655 89999999876633 2 2333358887655
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=72.60 E-value=2.9 Score=40.96 Aligned_cols=38 Identities=16% Similarity=0.063 Sum_probs=28.8
Q ss_pred cEEEEEcCCC------CCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYPA------QGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~~------~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|+|++++... -|=-.-...|+++|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 5788886522 2334667899999999999999999743
No 52
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=71.67 E-value=16 Score=33.16 Aligned_cols=81 Identities=12% Similarity=-0.012 Sum_probs=50.8
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhCCCceEEEEeCCccccCCCCCCCCchhHHHHhh--cCceEeecCCCc-----
Q 044731 280 GSVVYACFGSQKVLSKEQMEALALGLEKSGIRFLWVVKTSVIHAEGNGYGLIPYGFEERVA--GRGLVLKGWVPQ----- 352 (443)
Q Consensus 280 ~~vVyvSfGS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~vv~~W~PQ----- 352 (443)
...|+|+||..... .....++++|.... ++..+.+.+. ...+.+..... .+..+. ++.++
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~---------~~~~~l~~~~~~~~~v~v~-~~~~~m~~~m 223 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSN---------PNLKKLQKFAKLHNNIRLF-IDHENIAKLM 223 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTC---------TTHHHHHHHHHTCSSEEEE-ESCSCHHHHH
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCc---------hHHHHHHHHHhhCCCEEEE-eCHHHHHHHH
Confidence 45799999976433 34556777776544 4555555432 12233332222 233444 77777
Q ss_pred ------------------------------ccchhhHHHHHhhcceeEEeec
Q 044731 353 ------------------------------ADQFVNARLLVDDLRVAVLVCE 374 (443)
Q Consensus 353 ------------------------------~DQ~~na~~v~~~~g~G~~l~~ 374 (443)
.+|..||+.+++. |.++.+..
T Consensus 224 ~~aDlvI~~gG~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 224 NESNKLIISASSLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HTEEEEEEESSHHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHCCEEEECCcHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 7899999999988 99988763
No 53
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=68.59 E-value=37 Score=28.35 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=28.1
Q ss_pred CCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 17 YPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 17 ~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
-++.|=..-...||..|+++|++|.++-.+..
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 47788899999999999999999999987643
No 54
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=65.61 E-value=16 Score=34.13 Aligned_cols=56 Identities=13% Similarity=0.147 Sum_probs=33.2
Q ss_pred HhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 044731 363 VDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQE 430 (443)
Q Consensus 363 ~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~ 430 (443)
.+. |.|+.+. .+.++|.++|.+++.+ +..+++..+.++. ...++++.+-++.+.+.
T Consensus 309 ~~~-g~g~lv~------~d~~~la~~i~~ll~d-~~~~~~~~~~~~~----~~~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 309 LKA-GILKLAG------TDPEGVYRVVKGLLEN-PEELSRMRKAKNP----YGDGKAGLMVARGVAWR 364 (376)
T ss_dssp HHH-TSEEECC------SCHHHHHHHHHHHHTC-HHHHHHHHHSCCS----SCCSCHHHHHHHHHHHH
T ss_pred hcC-CceEECC------CCHHHHHHHHHHHHhC-hHhhhhhcccCCC----CCCChHHHHHHHHHHHH
Confidence 344 6665543 2889999999999998 6655544332111 13456555555554443
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=63.39 E-value=7.4 Score=36.46 Aligned_cols=67 Identities=16% Similarity=0.078 Sum_probs=49.0
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQC-GETKIKARELRDKALAAVKSGGSSTRDLETLVQEL 431 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~-~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 431 (443)
.+...++..+.+. |+|+.++ +.+++.++|.++..++ ..+++||++.++.+++ |-.+.+.+.+-+..+
T Consensus 270 ~~~~~~~~~v~~~-~~G~~~~-------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 270 QEGIANQELIENN-GLGWIVK-------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ETTCTTTHHHHHH-TCEEEES-------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ccChhHHHHHHhC-CeEEEeC-------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 5667788888877 9999886 4689999998875444 7889999999888864 555555555544433
No 56
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=61.70 E-value=73 Score=26.97 Aligned_cols=40 Identities=8% Similarity=0.120 Sum_probs=34.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
++..|++++-.+.|=..--+.+|.+.+.+|+.|.|+....
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 3457899999999999999999999999999999996433
No 57
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=60.57 E-value=12 Score=32.20 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=35.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVS 53 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~ 53 (443)
.||++.-.++.|-+. ...|.+.|.++|++|.++.|+.-...+.
T Consensus 5 k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 5 ERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp SEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 489988888888777 8899999999999999999865443333
No 58
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=59.66 E-value=13 Score=31.98 Aligned_cols=45 Identities=7% Similarity=-0.101 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV 52 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v 52 (443)
.+.+|++.+.++..|-....-++..|..+|++|.++......+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 356899999999999999999999999999999998865444333
No 59
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=59.17 E-value=1.1e+02 Score=28.36 Aligned_cols=37 Identities=8% Similarity=0.098 Sum_probs=27.8
Q ss_pred cEEEEEc--CCC-CCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFP--YPA-QGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~--~~~-~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|+|+++. +|. -|.-.-...|+++|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 5777764 233 35567788999999999 9999988643
No 60
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=58.40 E-value=11 Score=29.50 Aligned_cols=35 Identities=14% Similarity=-0.114 Sum_probs=24.6
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHH---hCCCceeEec
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLARE---LNIVRITFFS 143 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~---lgiP~i~~~~ 143 (443)
++++. +||+||.|...+ .|..+++. .++|+|.++.
T Consensus 48 ~~~~~--~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 48 IARKG--QFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHC--CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred HHHhC--CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 44555 899999998776 45666654 4789776643
No 61
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=55.75 E-value=18 Score=32.32 Aligned_cols=42 Identities=12% Similarity=-0.054 Sum_probs=37.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCc
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNL 49 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~ 49 (443)
.+.+|++.+.++..|-....-++..|..+|++|.++...-..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~ 163 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPA 163 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCS
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 457899999999999999999999999999999998754433
No 62
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=54.82 E-value=43 Score=27.34 Aligned_cols=28 Identities=29% Similarity=0.278 Sum_probs=22.3
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCC
Q 044731 282 VVYACFGSQKVLSKEQMEALALGLEKSG 309 (443)
Q Consensus 282 vVyvSfGS~~~~~~~~~~~i~~al~~~~ 309 (443)
.+|+++||...-+...+...+..|.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998766677888888887653
No 63
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=54.70 E-value=13 Score=31.12 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=33.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPI 51 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~ 51 (443)
.||++.-.++.|=+. ...|.+.|.++|++|.++.++.-.+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~f 46 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKF 46 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHH
Confidence 478888888766654 88999999999999999998754433
No 64
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=54.43 E-value=18 Score=28.69 Aligned_cols=40 Identities=8% Similarity=0.039 Sum_probs=35.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
+.+|++.+.++..|-....=++..|..+|++|.++.....
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p 42 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP 42 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 3589999999999999999999999999999998876433
No 65
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=53.47 E-value=20 Score=31.00 Aligned_cols=45 Identities=18% Similarity=-0.003 Sum_probs=38.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhh
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIV 52 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v 52 (443)
.+.+|++.+.++..|-....=++..|..+|++|.++...-..+.+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 457999999999999999999999999999999998765544433
No 66
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=53.00 E-value=21 Score=33.98 Aligned_cols=51 Identities=12% Similarity=0.115 Sum_probs=31.2
Q ss_pred HHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 044731 362 LVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDL 424 (443)
Q Consensus 362 v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~ 424 (443)
+++. |.++.+. . +.++|.++|.+++.+ +..+++..+-...+ ++|+++.+-+
T Consensus 341 ~v~~-G~~~lv~-----~-d~~~l~~ai~~ll~d-~~~~~~m~~~~~~~----~~~~aa~ri~ 391 (396)
T 3dzc_A 341 AVAA-GTVKLVG-----T-NQQQICDALSLLLTD-PQAYQAMSQAHNPY----GDGKACQRIA 391 (396)
T ss_dssp HHHH-TSEEECT-----T-CHHHHHHHHHHHHHC-HHHHHHHHTSCCTT----CCSCHHHHHH
T ss_pred HHHc-CceEEcC-----C-CHHHHHHHHHHHHcC-HHHHHHHhhccCCC----cCChHHHHHH
Confidence 3455 7664433 1 689999999999998 67665444332222 5566654433
No 67
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=52.84 E-value=19 Score=33.38 Aligned_cols=33 Identities=21% Similarity=0.177 Sum_probs=23.5
Q ss_pred HHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCchHHHHH
Q 044731 362 LVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQCGETKIK 402 (443)
Q Consensus 362 v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~ 402 (443)
+.+. |.|+.+. . +.+++.++|.+++.+ +..+++
T Consensus 316 ~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~-~~~~~~ 348 (375)
T 3beo_A 316 GIEA-GTLKLAG-----T-DEETIFSLADELLSD-KEAHDK 348 (375)
T ss_dssp HHHT-TSEEECC-----S-CHHHHHHHHHHHHHC-HHHHHH
T ss_pred eecC-CceEEcC-----C-CHHHHHHHHHHHHhC-hHhHhh
Confidence 3445 6665554 2 889999999999998 665544
No 68
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=52.43 E-value=56 Score=26.69 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=23.2
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCC
Q 044731 282 VVYACFGSQKVLSKEQMEALALGLEKSG 309 (443)
Q Consensus 282 vVyvSfGS~~~~~~~~~~~i~~al~~~~ 309 (443)
.+|+++||...-+.+.+..-+..|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999998778888888888888754
No 69
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=52.42 E-value=49 Score=26.99 Aligned_cols=28 Identities=29% Similarity=0.278 Sum_probs=21.4
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCC
Q 044731 282 VVYACFGSQKVLSKEQMEALALGLEKSG 309 (443)
Q Consensus 282 vVyvSfGS~~~~~~~~~~~i~~al~~~~ 309 (443)
+.|+|+||...-+.+.++..+..|.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6899999998656667777777777653
No 70
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=50.83 E-value=17 Score=31.15 Aligned_cols=39 Identities=15% Similarity=0.027 Sum_probs=31.9
Q ss_pred CcEEEEEcCCCCCChH-HHHHHHHHHHhCCceEEEEeCCCC
Q 044731 9 ATHVLIFPYPAQGHML-PLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~-P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
+.||++.-.++ +... =...|.+.|.++|++|.++.++.-
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 35788888777 5555 789999999999999999998654
No 71
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=49.48 E-value=21 Score=28.16 Aligned_cols=37 Identities=5% Similarity=0.153 Sum_probs=26.2
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-------CCCceeEechh
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-------NIVRITFFSSG 145 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-------giP~i~~~~~~ 145 (443)
++++. +||+||.|...+ .|..+++++ ++|+|.++...
T Consensus 52 ~~~~~--~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 52 MLKKG--DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHH--CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHhC--CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 34444 899999998776 477776654 47887776654
No 72
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=49.23 E-value=38 Score=30.16 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=33.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhh
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSS 54 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~ 54 (443)
.++||||+.-==+. |.-=+..|++.|.+ +|+|+++.+....+-..+
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~ 54 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASN 54 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccc
Confidence 45689988875444 45557888888887 899999999877655544
No 73
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=49.15 E-value=20 Score=30.53 Aligned_cols=43 Identities=14% Similarity=0.150 Sum_probs=33.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC-CceEEEEeCCCCchhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLK-NLDITILITPKNLPIVS 53 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~v~ 53 (443)
+||++.-.++.|-+. ...|.+.|.++ |++|.++.|+.-.+.+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 478888888877665 89999999999 99999999865444443
No 74
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=48.88 E-value=54 Score=26.79 Aligned_cols=28 Identities=21% Similarity=0.274 Sum_probs=22.2
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCC
Q 044731 282 VVYACFGSQKVLSKEQMEALALGLEKSG 309 (443)
Q Consensus 282 vVyvSfGS~~~~~~~~~~~i~~al~~~~ 309 (443)
.+|+++||...-+.+.+..-+..|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 4899999998766677888888887654
No 75
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=48.68 E-value=18 Score=31.15 Aligned_cols=41 Identities=15% Similarity=0.205 Sum_probs=34.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchh
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPI 51 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~ 51 (443)
+.||++...++.+-+. ...|.+.|.++| +|.++.++.-.+.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~f 59 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHF 59 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGT
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHh
Confidence 4689999999888776 899999999999 9999998654433
No 76
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=48.05 E-value=59 Score=26.62 Aligned_cols=28 Identities=18% Similarity=0.101 Sum_probs=22.3
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCC
Q 044731 282 VVYACFGSQKVLSKEQMEALALGLEKSG 309 (443)
Q Consensus 282 vVyvSfGS~~~~~~~~~~~i~~al~~~~ 309 (443)
.+|+++||...-+...+...+..|.+.+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6999999998666677887788887743
No 77
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=47.30 E-value=18 Score=30.60 Aligned_cols=69 Identities=9% Similarity=0.036 Sum_probs=42.9
Q ss_pred cchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhcCc------hHHHHHHHHHHHHHHH--H--HhcCCChHHH
Q 044731 354 DQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLSQC------GETKIKARELRDKALA--A--VKSGGSSTRD 423 (443)
Q Consensus 354 DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~~~------~~yr~~a~~l~~~~r~--a--~~~gg~s~~~ 423 (443)
+....+.+=.++ |+|+.+ |+|+|+++|.+++... .+|+ |.-.+-..+|. . |.+|..=-..
T Consensus 100 ~~id~~~Fe~~c-GVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~ 169 (187)
T 3tl4_X 100 EASTKMGMNENS-GVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPI 169 (187)
T ss_dssp GGCCHHHHHHTT-TTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHH
T ss_pred CCCCHHHHHHHC-CCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHH
Confidence 334444455555 887655 6799999999999642 5667 77777777775 2 4555544444
Q ss_pred HHHHHHHHH
Q 044731 424 LETLVQELR 432 (443)
Q Consensus 424 ~~~~~~~~~ 432 (443)
+|+-+-.+.
T Consensus 170 vD~~~l~lL 178 (187)
T 3tl4_X 170 IDQEVLKLL 178 (187)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 444443343
No 78
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=45.57 E-value=15 Score=35.19 Aligned_cols=39 Identities=15% Similarity=0.127 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCC-C-CCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 7 SRATHVLIFPYP-A-QGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 7 ~~~~~ili~~~~-~-~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
.++|+|++++.. . .+.-.-...+++.|+++| +|++++..
T Consensus 12 ~~~MkIl~is~~~~p~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 12 IRRPCYLVLSSHDFRTPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp -CCSCEEEEESSCTTSSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCCceEEEEecccCCChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 456889998732 1 222222345788999999 99999543
No 79
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=45.23 E-value=1.5e+02 Score=28.06 Aligned_cols=95 Identities=17% Similarity=0.191 Sum_probs=50.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCc--hhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccc
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNL--PIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKE 84 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~--~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 84 (443)
+++.+|+|+..... + | -+.+++++.|++|+++.+.... ..+. .--.++.++. .
T Consensus 3 ~~~k~l~Il~~~~~-~--~--~i~~aa~~lG~~vv~v~~~~~~~~~~~~------~~d~~~~~~~-----~--------- 57 (425)
T 3vot_A 3 KRNKNLAIICQNKH-L--P--FIFEEAERLGLKVTFFYNSAEDFPGNLP------AVERCVPLPL-----F--------- 57 (425)
T ss_dssp CCCCEEEEECCCTT-C--C--HHHHHHHHTTCEEEEEEETTSCCCCSCT------TEEEEEEECT-----T---------
T ss_pred CCCcEEEEECCChh-H--H--HHHHHHHHCCCEEEEEECCCcccccCHh------hccEEEecCC-----C---------
Confidence 44457888864432 2 2 2457778889999998754321 1110 0112333320 0
Q ss_pred cCCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEe--CCCcchHHHHHHHhCCCc
Q 044731 85 LGNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILS--DFFLGWTLNLARELNIVR 138 (443)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~--D~~~~~~~~vA~~lgiP~ 138 (443)
..... ..+.+.++.++. ++|.|+. |.....+..+++.||+|.
T Consensus 58 ---~d~~~-------~~~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 58 ---EDEEA-------AMDVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ---TCHHH-------HHHHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ---CCHHH-------HHHHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 01111 123345556666 8998875 333334557889999984
No 80
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=42.95 E-value=40 Score=29.40 Aligned_cols=41 Identities=12% Similarity=0.185 Sum_probs=36.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+.+.+|++.--|+.|=..-++.+|.+|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34578888889999999999999999999999999888765
No 81
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=42.38 E-value=17 Score=31.70 Aligned_cols=42 Identities=14% Similarity=0.030 Sum_probs=27.1
Q ss_pred HHHHHHHhCCCCCcEEEeCCCcch---HH----HHHHHhCCCceeEech
Q 044731 103 PIIQWFHSHANPPVAILSDFFLGW---TL----NLARELNIVRITFFSS 144 (443)
Q Consensus 103 ~~~~ll~~~~~~~D~vI~D~~~~~---~~----~vA~~lgiP~i~~~~~ 144 (443)
.+.+++++...+||++++|..... .. .+...+|+|.|.+.=.
T Consensus 92 ~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 92 LFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 344555665458999999975543 22 3455568998887543
No 82
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=41.52 E-value=15 Score=27.27 Aligned_cols=61 Identities=2% Similarity=-0.036 Sum_probs=38.0
Q ss_pred CCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccccc
Q 044731 377 DSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHT 438 (443)
Q Consensus 377 ~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~ 438 (443)
++.++.++|+.+++..+.+...-...-..+.+.++++ ...|...-++++|+..+....+.+
T Consensus 28 ~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~-D~d~DG~Idf~EF~~~m~~~~~~~ 88 (100)
T 3nxa_A 28 KNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNL-DANHDGRISFDEYWTLIGGITGPI 88 (100)
T ss_dssp TTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHS-CCCSSCCBCHHHHHHHHHHHHGGG
T ss_pred CCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHHHHHH
Confidence 4899999999999886542100011234566677665 444444557888888776655433
No 83
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=41.47 E-value=26 Score=30.11 Aligned_cols=38 Identities=3% Similarity=-0.055 Sum_probs=29.6
Q ss_pred cEEEEEcCCCCCChHH-HHHHHHHHHhCCceEEEEeCCCC
Q 044731 10 THVLIFPYPAQGHMLP-LLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P-~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.||++.-.++ +...- ...|.+.|.++|++|.++.|+.-
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 4788877776 44554 78999999999999999998653
No 84
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=41.05 E-value=43 Score=32.41 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=34.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHh-CCceEEEEeCCCCchhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSL-KNLDITILITPKNLPIV 52 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~-rGh~Vt~~t~~~~~~~v 52 (443)
-+++.--|+.|=..-.+++|...+. .|..|.|++.+.....+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 4677778999999999999999987 58999999987654433
No 85
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=40.19 E-value=49 Score=27.90 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=34.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVS 53 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~ 53 (443)
.||++.-.++.|-+ =...|.++|.++|++|.++.|+.-...+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 37899888888855 57889999999999999999865443333
No 86
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=39.80 E-value=45 Score=24.90 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=24.5
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-------CCCceeEechh
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-------NIVRITFFSSG 145 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-------giP~i~~~~~~ 145 (443)
.+++. +||+||.|...+ .+..+.+++ ++|+|.++...
T Consensus 41 ~l~~~--~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 41 KLSEF--TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHTTB--CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHhc--CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 34444 899999997665 356665543 47877776543
No 87
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=38.47 E-value=35 Score=31.33 Aligned_cols=34 Identities=12% Similarity=0.196 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
.+.++|.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 345789999666666 6789999999999998864
No 88
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=38.44 E-value=1.9e+02 Score=24.93 Aligned_cols=108 Identities=6% Similarity=0.005 Sum_probs=57.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccccccc
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKEL 85 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 85 (443)
++++|+|+..++.+ -+..+.+.|.+. +++|..+.+......+..... ..+|.+..++ +..+.
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~-~~gIp~~~~~-------~~~~~----- 84 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERAR-RAGVDALHMD-------PAAYP----- 84 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHH-HTTCEEEECC-------GGGSS-----
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHH-HcCCCEEEEC-------ccccc-----
Confidence 45699998776643 366777788876 789877766532222211110 2567766442 11000
Q ss_pred CCCChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcc-hHHHHHHHhCCCceeEec
Q 044731 86 GNRGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLG-WTLNLARELNIVRITFFS 143 (443)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~-~~~~vA~~lgiP~i~~~~ 143 (443)
.. ....+.+.+.+++. ++|++|+=.+.. ....+-..+....+-+.+
T Consensus 85 ---~r-------~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 85 ---SR-------TAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp ---SH-------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred ---ch-------hhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 00 11223455667777 899998875533 233444444444444433
No 89
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=37.55 E-value=27 Score=29.93 Aligned_cols=43 Identities=21% Similarity=0.201 Sum_probs=31.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHh-CCceEEEEeCCCCchh
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSL-KNLDITILITPKNLPI 51 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~-rGh~Vt~~t~~~~~~~ 51 (443)
++.||++...++.+=+. ...|.+.|.+ +|++|.++.|+.-.+.
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~f 61 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHF 61 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGS
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHH
Confidence 34688888888877554 5899999999 9999999998654433
No 90
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=36.43 E-value=1.9e+02 Score=25.17 Aligned_cols=94 Identities=9% Similarity=-0.067 Sum_probs=51.8
Q ss_pred cEEEEEcCCCCCCh-HHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCC
Q 044731 10 THVLIFPYPAQGHM-LPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNR 88 (443)
Q Consensus 10 ~~ili~~~~~~gH~-~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (443)
|||+++-.-+.-++ .-+...++.++..|.+|.+++.+.- +...+.
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~~g---------------------------p~~i~~------- 47 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPRAG---------------------------VPSIEG------- 47 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCSSS---------------------------CSSCCS-------
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCC---------------------------chhhcC-------
Confidence 56777665555444 4666677777766777776654210 111010
Q ss_pred ChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHH-HHHHHhCCCceeE
Q 044731 89 GNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTL-NLARELNIVRITF 141 (443)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~-~vA~~lgiP~i~~ 141 (443)
..........+.+.++++.+. .+|++|.-++...++ .+.+.+++|++.+
T Consensus 48 -~~d~~~a~~~l~~~~~~l~~~---g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 48 -HFDEAIAAVGVLEQIRAGREQ---GVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHH---TCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred -hhHHHHHHHHHHHHHHHHHHC---CCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 111222223344444444333 699999988766555 4566779998865
No 91
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=35.64 E-value=46 Score=25.51 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
.++|+++ + .|.+- ..+++.|+++||+|+++..
T Consensus 4 ~m~i~Ii--G-~G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIA--G-IGRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEE--C-CSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE--C-CCHHH--HHHHHHHHhCCCeEEEEEC
Confidence 4688887 2 36554 4678999999999999875
No 92
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=35.53 E-value=64 Score=20.71 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=32.5
Q ss_pred CCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044731 375 GGDSVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRK 433 (443)
Q Consensus 375 ~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~ 433 (443)
+.++.++.+++..+++.+- . . .....+...++.. ...|...-++++|+..+..
T Consensus 12 d~~G~i~~~e~~~~l~~~~-~--~--~~~~~~~~~~~~~-D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 12 NGDGAVSYEEVKAFVSKKR-A--I--KNEQLLQLIFKSI-DADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp TCSSSCCHHHHHHHHHHHH-H--H--HHHHHHHHHHHHH-CTTCSSSCCHHHHHHHHTC
T ss_pred CCCCcccHHHHHHHHHHcc-C--C--CcHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHh
Confidence 3468899999999998762 2 1 2223455556554 3344444567777776543
No 93
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=34.90 E-value=32 Score=29.16 Aligned_cols=38 Identities=11% Similarity=0.008 Sum_probs=31.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.||++.-.++.+=+. ...|.+.|.++|++|.++.++.-
T Consensus 9 k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A 46 (194)
T 1p3y_1 9 KKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTA 46 (194)
T ss_dssp CEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhH
Confidence 478888888776665 68999999999999999998653
No 94
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=34.82 E-value=55 Score=28.65 Aligned_cols=42 Identities=14% Similarity=0.081 Sum_probs=27.6
Q ss_pred HHHHHHHHhCCCCCcEEEeCCCcch-----H--HHHHHHhCCCceeEec
Q 044731 102 DPIIQWFHSHANPPVAILSDFFLGW-----T--LNLARELNIVRITFFS 143 (443)
Q Consensus 102 ~~~~~ll~~~~~~~D~vI~D~~~~~-----~--~~vA~~lgiP~i~~~~ 143 (443)
+.+.+++++...+||++++|..... | -.+...+|+|.|.+.=
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 143 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAK 143 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeec
Confidence 3444555655458999999975532 2 2455667899887744
No 95
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=34.01 E-value=26 Score=29.34 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=30.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCc
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNL 49 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~ 49 (443)
||++.-.++.+=+ =...+.+.|.++|++|.++.|+.-.
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 6777777776555 5789999999999999999986543
No 96
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=33.69 E-value=60 Score=29.81 Aligned_cols=35 Identities=9% Similarity=-0.013 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
+..||.|+=.++.| |-.+|+.|+++||+|+..-..
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 34688888888877 667999999999999987653
No 97
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=33.58 E-value=21 Score=32.66 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=39.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhh
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSS 54 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~ 54 (443)
++|+++-..+-|++.-.+++.+.|+++ +.+|++++.+.+.+.+..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 479999999999999999999999986 999999998776665544
No 98
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=33.32 E-value=24 Score=25.74 Aligned_cols=60 Identities=10% Similarity=0.077 Sum_probs=36.5
Q ss_pred CCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccccc
Q 044731 378 SVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHT 438 (443)
Q Consensus 378 ~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~ 438 (443)
+.++.++|+..++.-+.+.-.....-..+.+.++++ ...|...-++++|+..+....+-|
T Consensus 27 G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~-D~d~DG~Idf~EF~~~~~~~~~~~ 86 (93)
T 4eto_A 27 FKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNL-DSNRDNEVDFQEYCVFLSCIAMMC 86 (93)
T ss_dssp TSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHH-CTTSSSSBCHHHHHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHH-CCCCCCCCcHHHHHHHHHHHHHHH
Confidence 589999999999864442000111234566667665 444444557888888776655444
No 99
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=32.90 E-value=33 Score=32.31 Aligned_cols=48 Identities=10% Similarity=0.111 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044731 381 DSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRK 433 (443)
Q Consensus 381 t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~ 433 (443)
+.+++.++| +++.+ +..+++. ++..++...+.=+-.+..+.+.+.+.+
T Consensus 342 d~~~la~~i-~l~~~-~~~~~~~---~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 342 DVDDLVEAF-TFFKD-EKNRKEY---GKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp CHHHHHHHH-HHTTS-HHHHHHH---HHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHH-HHhcC-HHHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 899999999 99998 5655433 333333223333444455555554443
No 100
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.75 E-value=71 Score=24.30 Aligned_cols=37 Identities=16% Similarity=0.269 Sum_probs=24.1
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-------CCCceeEechh
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-------NIVRITFFSSG 145 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-------giP~i~~~~~~ 145 (443)
.+.+. +||+||.|...+ .+..+.+.+ ++|+|.++...
T Consensus 43 ~~~~~--~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 43 QIYKN--LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHS--CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHhC--CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 34455 899999998665 355555433 57777776654
No 101
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=31.20 E-value=57 Score=25.22 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=23.3
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh---------CCCceeEech
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL---------NIVRITFFSS 144 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l---------giP~i~~~~~ 144 (443)
.++.. +||+||.|...+ .+..+.+.+ .+|+|.++..
T Consensus 53 ~~~~~--~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 53 AMAEE--DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHS--CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHhcC--CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 34455 899999997655 355555543 2677776654
No 102
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=30.81 E-value=80 Score=23.28 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=24.1
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHH----hCCCceeEechh
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLARE----LNIVRITFFSSG 145 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~----lgiP~i~~~~~~ 145 (443)
.+++. +||+||.|...+ .+..+.+. .++|+|.++...
T Consensus 41 ~~~~~--~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 41 MVEEL--QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHTT--CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHhhC--CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 34555 899999998665 34545443 367877776544
No 103
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=30.12 E-value=2e+02 Score=24.58 Aligned_cols=35 Identities=9% Similarity=0.166 Sum_probs=23.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCc--eEEEEeCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNL--DITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh--~Vt~~t~~~ 47 (443)
++|+++..+..+ -+..+.++|.+.+| +|..+.+..
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~ 38 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDN 38 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESC
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCC
Confidence 478877666543 36677778888888 777666543
No 104
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=30.08 E-value=33 Score=27.33 Aligned_cols=32 Identities=13% Similarity=0.308 Sum_probs=24.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
.|++++= .|++- ..+++.|.++||+|+++...
T Consensus 4 ~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4677772 36554 78899999999999999864
No 105
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=29.36 E-value=31 Score=30.98 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=23.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
|||+|. ++.|.+- .+|+++|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 455543 5555443 57899999999999998753
No 106
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=29.31 E-value=36 Score=29.75 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=20.5
Q ss_pred CCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 20 QGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 20 ~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.|.+- ..+|++|+++|++|+++..+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 55443 468999999999999998753
No 107
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=28.99 E-value=76 Score=25.22 Aligned_cols=90 Identities=9% Similarity=-0.009 Sum_probs=54.3
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCCCChHHHHHHHhhh
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGNRGNLPIMSALGKL 100 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (443)
.+-.-++.+++.|.+.|+++ ++|......++. .++.+..+.. .+++-. .. .
T Consensus 34 ~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~-----~Gi~v~~v~k-----~~egg~-~~----------------~ 84 (143)
T 2yvq_A 34 SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNA-----NNVPATPVAW-----PSQEGQ-NP----------------S 84 (143)
T ss_dssp GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHH-----TTCCCEEECC-----GGGC----------------------
T ss_pred cchHHHHHHHHHHHHCCCEE--EECchHHHHHHH-----cCCeEEEEEe-----ccCCCc-cc----------------c
Confidence 46677999999999999984 444344445544 5666665531 111100 00 0
Q ss_pred hHHHHHHHHhCCCCCcEEEeCCCc--------chHHHHHHHhCCCceeE
Q 044731 101 YDPIIQWFHSHANPPVAILSDFFL--------GWTLNLARELNIVRITF 141 (443)
Q Consensus 101 ~~~~~~ll~~~~~~~D~vI~D~~~--------~~~~~vA~~lgiP~i~~ 141 (443)
.+.+.+++++. +.|+||.-.-. ......|-.+|||+++-
T Consensus 85 ~~~i~d~i~~g--~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 85 LSSIRKLIRDG--SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp CBCHHHHHHTT--SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred cccHHHHHHCC--CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 02355667776 89999985432 12336788899997754
No 108
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=28.37 E-value=64 Score=31.92 Aligned_cols=40 Identities=15% Similarity=0.097 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCCCCC--hHHHHHHHHH--HHhCCceEEEEeCC
Q 044731 7 SRATHVLIFPYPAQGH--MLPLLDLTHQ--LSLKNLDITILITP 46 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH--~~P~l~La~~--L~~rGh~Vt~~t~~ 46 (443)
.+++||+++.....+| -.-+..|++. |.++||+|++++..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 3568999988665555 4567889999 77789999999864
No 109
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=27.73 E-value=26 Score=31.86 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=25.5
Q ss_pred CCCCCcEEEEEcCCCCCChHHHHHHHHHHHhC-----C-ceEEEEeC
Q 044731 5 SNSRATHVLIFPYPAQGHMLPLLDLTHQLSLK-----N-LDITILIT 45 (443)
Q Consensus 5 ~~~~~~~ili~~~~~~gH~~P~l~La~~L~~r-----G-h~Vt~~t~ 45 (443)
.+..+++|+|+=.+..| ..+|..|++. | |+|+++..
T Consensus 4 m~~~~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 33445789988665555 3668889988 9 99999864
No 110
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=27.70 E-value=85 Score=24.47 Aligned_cols=38 Identities=8% Similarity=0.009 Sum_probs=27.0
Q ss_pred cEEEEEcC-C--CCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPY-P--AQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~-~--~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.+++|+-. + .......-+.+|...++.||+|+++-+..
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 35555443 3 35566777888888899999999887643
No 111
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=27.39 E-value=33 Score=29.43 Aligned_cols=18 Identities=11% Similarity=0.224 Sum_probs=16.2
Q ss_pred HHHHHHHHhCCceEEEEe
Q 044731 27 LDLTHQLSLKNLDITILI 44 (443)
Q Consensus 27 l~La~~L~~rGh~Vt~~t 44 (443)
+.+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678999999999999984
No 112
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=27.26 E-value=86 Score=28.38 Aligned_cols=39 Identities=8% Similarity=-0.067 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCCC-C---hHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 9 ATHVLIFPYPAQG-H---MLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 9 ~~~ili~~~~~~g-H---~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
+++|+++.-+-.+ | +.--..++++|.+.||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678887764332 2 3456788999999999999988543
No 113
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=26.80 E-value=59 Score=28.57 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=28.0
Q ss_pred CcEEEEEc-C-CCCCChHHHHHHHHHHHhCCceEEEEe
Q 044731 9 ATHVLIFP-Y-PAQGHMLPLLDLTHQLSLKNLDITILI 44 (443)
Q Consensus 9 ~~~ili~~-~-~~~gH~~P~l~La~~L~~rGh~Vt~~t 44 (443)
+++.++++ . ...|=..-.+.|++.|+++|.+|.++=
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 34444433 3 567888999999999999999999884
No 114
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=26.32 E-value=37 Score=31.80 Aligned_cols=30 Identities=30% Similarity=0.299 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEe
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILI 44 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t 44 (443)
|||+|+=.+-.| +.+|..|+++||+|+++=
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 677777544333 778899999999999983
No 115
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.31 E-value=54 Score=25.94 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=27.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
.+++++.-+. =+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4666665443 4899999999999999999998 644
No 116
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=26.17 E-value=86 Score=28.41 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=31.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEE
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTL 65 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~ 65 (443)
++|+|+=.++.| ..+|..|++.||+|+++.... .+.+.. .++++.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~-----~g~~~~ 47 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIAG-----NGLKVF 47 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHHH-----TCEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHHh-----CCCEEE
Confidence 578888777777 457899999999999998654 334433 456554
No 117
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=26.14 E-value=73 Score=32.05 Aligned_cols=44 Identities=14% Similarity=-0.043 Sum_probs=38.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchh
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPI 51 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~ 51 (443)
.+.+|++.+.++..|-....-++..|..+|++|..+...-..+.
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~ 140 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEK 140 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 35789999999999999999999999999999999876544433
No 118
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=25.82 E-value=96 Score=30.43 Aligned_cols=90 Identities=13% Similarity=0.119 Sum_probs=49.0
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCccc-ccccCCCChHHHHHHH--
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVEN-VKELGNRGNLPIMSAL-- 97 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 97 (443)
++-.-+..+|+.|++.|+++. +|....+.++. .||.+..+.. ..++|+-... .. .+-..+...+
T Consensus 18 sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e-----~GI~v~~V~~--vTgfPEil~GRVK----TLHP~ihgGiLa 84 (523)
T 3zzm_A 18 YDKTGLVDLAQGLSAAGVEII--STGSTAKTIAD-----TGIPVTPVEQ--LTGFPEVLDGRVK----TLHPRVHAGLLA 84 (523)
T ss_dssp SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHT-----TTCCCEEHHH--HHSCCCCTTTTSS----SCSHHHHHHHHC
T ss_pred eccccHHHHHHHHHHCCCEEE--EcchHHHHHHH-----cCCceeeccc--cCCCchhhCCccc----cCCchhhhhhcc
Confidence 455668899999999999854 55444555554 5677665431 1234443211 11 1222333322
Q ss_pred -hhhhHHHHHHHHhCCCCCcEEEeCCC
Q 044731 98 -GKLYDPIIQWFHSHANPPVAILSDFF 123 (443)
Q Consensus 98 -~~~~~~~~~ll~~~~~~~D~vI~D~~ 123 (443)
+...+.++++-+..-.++|+||+..+
T Consensus 85 ~r~~~~h~~~l~~~~i~~iDlVvvNLY 111 (523)
T 3zzm_A 85 DLRKSEHAAALEQLGIEAFELVVVNLY 111 (523)
T ss_dssp CTTSHHHHHHHHHHTCCCCSEEEEECC
T ss_pred CCCCHHHHHHHHHCCCCceeEEEEeCC
Confidence 22334455544433247899999853
No 119
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=25.74 E-value=2.6e+02 Score=22.48 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=26.3
Q ss_pred ccchhhHHHHHhhcceeEEeecCCCCCCCHHHHHHHHHHHhc-CchHHHH
Q 044731 353 ADQFVNARLLVDDLRVAVLVCEGGDSVPDSDELGKVIGESLS-QCGETKI 401 (443)
Q Consensus 353 ~DQ~~na~~v~~~~g~G~~l~~~~~~~~t~e~l~~ai~~vl~-~~~~yr~ 401 (443)
.|-......+ .. +.|..++ .-+.+++.++|.+++. + +..++
T Consensus 145 ~~~~~~~e~~-~~-~~g~~~~-----~~~~~~l~~~i~~l~~~~-~~~~~ 186 (200)
T 2bfw_A 145 SAVGGLRDII-TN-ETGILVK-----AGDPGELANAILKALELS-RSDLS 186 (200)
T ss_dssp ESCHHHHHHC-CT-TTCEEEC-----TTCHHHHHHHHHHHHHCC-HHHHH
T ss_pred eCCCChHHHc-CC-CceEEec-----CCCHHHHHHHHHHHHhcC-HHHHH
Confidence 4555555555 33 4555554 2378999999999998 8 45443
No 120
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=25.70 E-value=1e+02 Score=23.27 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=22.8
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-------CCCceeEech
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-------NIVRITFFSS 144 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-------giP~i~~~~~ 144 (443)
.+... +||+||.|...+ .+..+.+.+ .+|+|.++..
T Consensus 42 ~l~~~--~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 42 ALNAT--PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHS--CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHhcc--CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 34555 799999997654 355555443 4677766543
No 121
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=25.12 E-value=75 Score=27.96 Aligned_cols=41 Identities=20% Similarity=-0.085 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCCCcEEEeCCCcc-----hH--HHHHHHhCCCceeEec
Q 044731 103 PIIQWFHSHANPPVAILSDFFLG-----WT--LNLARELNIVRITFFS 143 (443)
Q Consensus 103 ~~~~ll~~~~~~~D~vI~D~~~~-----~~--~~vA~~lgiP~i~~~~ 143 (443)
.+.+++++...+||++++|.... +| -.+...+|+|.|.+.=
T Consensus 98 ~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 145 (246)
T 3ga2_A 98 LIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK 145 (246)
T ss_dssp HHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeec
Confidence 34444555444899999996543 22 2455667889887743
No 122
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=25.09 E-value=44 Score=26.15 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
+.||+++=++.. -..+++.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRV-----GSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEECC
Confidence 457888755433 357899999999999999864
No 123
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=24.83 E-value=3.1e+02 Score=23.03 Aligned_cols=42 Identities=7% Similarity=-0.120 Sum_probs=32.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHH-HhCCceEEEEeCCCCchhh
Q 044731 11 HVLIFPYPAQGHMLPLLDLTHQL-SLKNLDITILITPKNLPIV 52 (443)
Q Consensus 11 ~ili~~~~~~gH~~P~l~La~~L-~~rGh~Vt~~t~~~~~~~v 52 (443)
-+++.--|+.|=..-.++++... .+.|..|.+++.+.....+
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~ 74 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDL 74 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHH
Confidence 46677789999999999988764 4568889999987665443
No 124
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=24.48 E-value=1.1e+02 Score=22.88 Aligned_cols=37 Identities=14% Similarity=0.137 Sum_probs=29.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEe
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILI 44 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t 44 (443)
..++|++++..+.|+-.-...+-+.+.++|.++.+-+
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3478999999999888666777788888998766544
No 125
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=24.28 E-value=50 Score=23.64 Aligned_cols=57 Identities=12% Similarity=0.141 Sum_probs=34.8
Q ss_pred CCCCHHHHHHHHHHHh----cCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcccccc
Q 044731 378 SVPDSDELGKVIGESL----SQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHTS 439 (443)
Q Consensus 378 ~~~t~e~l~~ai~~vl----~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~~ 439 (443)
+.++.++|+.+++..+ .. +.- -..+.+.++++ ...|...-++++|+..+......|+
T Consensus 26 g~Is~~EL~~~l~~~~~~~lg~-~~~---~~~v~~~~~~~-D~d~dG~I~f~EF~~~~~~l~~~~~ 86 (92)
T 3rm1_A 26 HKLKKSELKELINNELSHFLEE-IKE---QEVVDKVMETL-DSNGDGECDFQEFMAFVAMITTACH 86 (92)
T ss_dssp TSBCHHHHHHHHHHHCTTTSCC-CCS---HHHHHHHHHHH-CTTSSSSBCHHHHHHHHHHHHHHGG
T ss_pred CeECHHHHHHHHHHHhhhhccC-ccc---HHHHHHHHHHH-cCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 4899999999998843 32 111 23445555544 3344444577788777766665544
No 126
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=24.14 E-value=1.7e+02 Score=21.72 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=27.6
Q ss_pred CCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCC
Q 044731 379 VPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGS 419 (443)
Q Consensus 379 ~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~ 419 (443)
.+++|++++...++ ...+.|+.-|++.+.+. ..|+.
T Consensus 2 ~~~~eq~~k~~~el----~~v~~n~~lL~EML~~~-~p~~~ 37 (103)
T 1wrd_A 2 PLGSEQIGKLRSEL----EMVSGNVRVMSEMLTEL-VPTQA 37 (103)
T ss_dssp CSSSTTHHHHHHHH----HHHHHHHHHHHHHHHHS-CTTTC
T ss_pred CCCHHHHHHHHHHH----HHHHHHHHHHHHHHHhc-CCCCC
Confidence 56788888888776 57899999999988764 45543
No 127
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=24.01 E-value=1e+02 Score=23.94 Aligned_cols=36 Identities=22% Similarity=0.169 Sum_probs=22.7
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHH-------hCCCceeEech
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLARE-------LNIVRITFFSS 144 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~-------lgiP~i~~~~~ 144 (443)
.+++. +||+||.|.... .+..+.+. -++|+|.++..
T Consensus 46 ~l~~~--~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 46 FLSLT--RPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHTTC--CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHhC--CCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 34455 899999997654 35544443 25677776653
No 128
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=23.67 E-value=54 Score=29.82 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 7 SRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 7 ~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
.++++|.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 445789888554444 6789999999999998864
No 129
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=23.67 E-value=1.4e+02 Score=22.20 Aligned_cols=32 Identities=19% Similarity=0.349 Sum_probs=21.2
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-------CCCceeEechh
Q 044731 114 PPVAILSDFFLG--WTLNLAREL-------NIVRITFFSSG 145 (443)
Q Consensus 114 ~~D~vI~D~~~~--~~~~vA~~l-------giP~i~~~~~~ 145 (443)
++|+||.|...+ .+..+.+.+ .+|+|.++...
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 699999997665 355555443 46777766543
No 130
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=23.56 E-value=98 Score=23.81 Aligned_cols=63 Identities=17% Similarity=0.207 Sum_probs=35.4
Q ss_pred ecCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHH-HHHHHhcCCChHHHHHHHHHHHHhcccc
Q 044731 373 CEGGDSVPDSDELGKVIGESLSQCGETKIKARELRDK-ALAAVKSGGSSTRDLETLVQELRKLRFH 437 (443)
Q Consensus 373 ~~~~~~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~-~r~a~~~gg~s~~~~~~~~~~~~~~~~~ 437 (443)
+.+.++.++.++++++++.++... .-.+.+..+-+. +..+ ...|...-++++|+..+.+....
T Consensus 85 D~d~~G~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-D~~~dg~i~~~eF~~~~~~~~~~ 148 (155)
T 3ll8_B 85 DMDKDGYISNGELFQVLKMMVGNN-LKDTQLQQIVDKTIINA-DKDGDGRISFEEFCAVVGGLDIH 148 (155)
T ss_dssp CTTCSSCBCHHHHHHHHHHHHGGG-SCHHHHHHHHHHHHHHH-CTTSSSSBCHHHHHHHHGGGCGG
T ss_pred CCCCCCcCcHHHHHHHHHHHhccC-CCHHHHHHHHHHHHHHh-CCCCCCcCcHHHHHHHHhccCch
Confidence 344568999999999999865431 112222222222 2212 33333344677888777665543
No 131
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=23.17 E-value=1.1e+02 Score=27.04 Aligned_cols=117 Identities=10% Similarity=0.063 Sum_probs=63.4
Q ss_pred EEEEEcC-CCCCChHHHHHHHHHHHhCCceEEEEeCC------CC--chhhhhhccCCCCeeEEEeCCCCCCCCCCCccc
Q 044731 11 HVLIFPY-PAQGHMLPLLDLTHQLSLKNLDITILITP------KN--LPIVSSLLDARPAIQTLVLPFPSHPSVPAGVEN 81 (443)
Q Consensus 11 ~ili~~~-~~~gH~~P~l~La~~L~~rGh~Vt~~t~~------~~--~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 81 (443)
.|+|... ...|=..-.+.|++.|+++|++|.++=+- .. ...+.... +......++.+ ..
T Consensus 28 ~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~--g~~~~~~~~~~------~~---- 95 (251)
T 3fgn_A 28 ILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLA--GVTQLAGLARY------PQ---- 95 (251)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHH--CCCEEEEEEEC------SS----
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHc--CCCCCCCCeeE------CC----
Confidence 3444444 46788899999999999999999987421 01 01111110 00000111111 00
Q ss_pred ccccCCCChHHHHHHHh----hhhHHHHHHHHhCCCCCcEEEeCCCc----------chHHHHHHHhCCCceeEechh
Q 044731 82 VKELGNRGNLPIMSALG----KLYDPIIQWFHSHANPPVAILSDFFL----------GWTLNLARELNIVRITFFSSG 145 (443)
Q Consensus 82 ~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~~~~~D~vI~D~~~----------~~~~~vA~~lgiP~i~~~~~~ 145 (443)
........... ...+.+.+.+++...++|++|.|... .....+|..++.|+|.+....
T Consensus 96 ------p~sP~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 96 ------PMAPAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp ------SSCHHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred ------CCChHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 00011111111 12345566666655589999999632 123579999999998886653
No 132
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=23.15 E-value=3.4e+02 Score=22.93 Aligned_cols=106 Identities=8% Similarity=0.083 Sum_probs=55.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CceEEEEeCCCCchhhhhhccCCCCeeEEEeCCCCCCCCCCCcccccccCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLK--NLDITILITPKNLPIVSSLLDARPAIQTLVLPFPSHPSVPAGVENVKELGN 87 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~v~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (443)
++|+++-.++.+ -+..+.++|.+. +|+|..+.+......+..... ..+|.+..++ +..+.
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~-~~gIp~~~~~-------~~~~~------- 65 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAA-RENVPAFVFS-------PKDYP------- 65 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHH-HTTCCEEECC-------GGGSS-------
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHH-HcCCCEEEeC-------ccccc-------
Confidence 578777766643 356667788876 799987776532222221110 1566655432 11000
Q ss_pred CChHHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcc-hHHHHHHHhCCCceeEec
Q 044731 88 RGNLPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLG-WTLNLARELNIVRITFFS 143 (443)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~-~~~~vA~~lgiP~i~~~~ 143 (443)
.. ....+.+.+.+++. ++|++|+=.+.. -...+-..+....+-+.+
T Consensus 66 -~~-------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 66 -SK-------AAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp -SH-------HHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred -ch-------hhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 00 11223445667777 899998875433 233444445444454443
No 133
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=22.83 E-value=1.3e+02 Score=22.07 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=23.5
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-----CCCceeEechh
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-----NIVRITFFSSG 145 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-----giP~i~~~~~~ 145 (443)
.+... +||++|.|...+ .+..+.+.+ ++|+|.++...
T Consensus 42 ~~~~~--~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 42 FAPDV--RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HGGGC--CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHhcC--CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 34454 799999997654 355444433 56777776554
No 134
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=22.66 E-value=32 Score=25.34 Aligned_cols=58 Identities=9% Similarity=0.089 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHHHhcCchHHH--HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccccc
Q 044731 378 SVPDSDELGKVIGESLSQCGETK--IKARELRDKALAAVKSGGSSTRDLETLVQELRKLRFHT 438 (443)
Q Consensus 378 ~~~t~e~l~~ai~~vl~~~~~yr--~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~~~~ 438 (443)
+.++.++|+..++.-+.+ ... ..-..+.+.++++ ...|...-++++|+..+...-+-|
T Consensus 28 G~Is~~EL~~~l~~~lg~--~l~~~~~~~ev~~~i~~~-D~d~DG~Idf~EF~~~~~~~~~~~ 87 (98)
T 3n22_A 28 FKLSKGEMKELLHKELPS--FVGEKVDEEGLKKLMGSL-DENSDQQVDFQEYAVFLALITVMS 87 (98)
T ss_dssp TSBCHHHHHHHHHHHCHH--HHCSSCCHHHHHHHHHHH-CTTSSSSBCHHHHHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhh--hccCCCCHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHHHHHH
Confidence 489999999999863321 110 1123556666665 444444557888888776654433
No 135
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=22.57 E-value=42 Score=23.93 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=32.4
Q ss_pred CCCC-CCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 044731 375 GGDS-VPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLR 435 (443)
Q Consensus 375 ~~~~-~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~ 435 (443)
+.++ .++.++|+.++.+.+.. .+.. ..+.+.++.+ ...|...-++++|+..+....
T Consensus 23 d~dG~~I~~~El~~~l~~~~g~--~~~~--~~~~~l~~~~-D~d~dG~I~~~EF~~~~~~~~ 79 (93)
T 1xk4_A 23 KGNFHAVYRDDLKKLLETESPQ--YIRK--KGADVWFKEL-DINTDGAVNFQEFLILVIKMG 79 (93)
T ss_dssp SSCTTCBCHHHHHHHHHHHSCH--HHHT--TCHHHHHHHH-CTTCSSSBCHHHHHHHHHHHH
T ss_pred CCCcCeECHHHHHHHHHHHCcc--cCCH--HHHHHHHHHh-CCCCCCCCcHHHHHHHHHHHH
Confidence 3457 89999999999544442 2222 3345556554 333333346777776665443
No 136
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=22.38 E-value=1.5e+02 Score=21.88 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=22.2
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-------CCCceeEech
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-------NIVRITFFSS 144 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-------giP~i~~~~~ 144 (443)
.+.+. +||+||.|.... .+..+.+.+ ++|+|.++..
T Consensus 42 ~l~~~--~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 42 QALAH--PPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHS--CCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHhcC--CCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 34555 799999997654 344444321 5677766553
No 137
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=22.00 E-value=1.3e+02 Score=25.05 Aligned_cols=36 Identities=14% Similarity=0.022 Sum_probs=28.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
..++++..+..|+-.-+..+++.|+++|+.|..+..
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 356666666778888899999999999998776653
No 138
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=21.80 E-value=80 Score=25.03 Aligned_cols=33 Identities=12% Similarity=0.171 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 9 ATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 9 ~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
..+|+++=. |.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 468888843 5443 55789999999999998753
No 139
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=21.73 E-value=52 Score=28.29 Aligned_cols=38 Identities=8% Similarity=-0.061 Sum_probs=31.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|+|+|..-++.|=..-...||..|+++|++|.++-.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 46777666777888999999999999999999987654
No 140
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=21.69 E-value=1.2e+02 Score=22.86 Aligned_cols=32 Identities=28% Similarity=0.176 Sum_probs=21.2
Q ss_pred CCcEEEeCCCcc---hHHHHHHH----hCCCceeEechh
Q 044731 114 PPVAILSDFFLG---WTLNLARE----LNIVRITFFSSG 145 (443)
Q Consensus 114 ~~D~vI~D~~~~---~~~~vA~~----lgiP~i~~~~~~ 145 (443)
+||+||.|.... .+..+.+. .++|+|.++...
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 799999997543 34444433 368888776654
No 141
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=21.52 E-value=2.1e+02 Score=25.34 Aligned_cols=34 Identities=29% Similarity=0.216 Sum_probs=24.1
Q ss_pred CCCcEE-EeCCCcc-hHHHHHHHhCCCceeEechhH
Q 044731 113 NPPVAI-LSDFFLG-WTLNLARELNIVRITFFSSGS 146 (443)
Q Consensus 113 ~~~D~v-I~D~~~~-~~~~vA~~lgiP~i~~~~~~~ 146 (443)
..||+| |.|...- -+..=|.++|||.|.+.-+.+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 367766 6776443 466778899999998866543
No 142
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=21.51 E-value=48 Score=26.80 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=27.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKN 48 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~ 48 (443)
.+++++.-+. | +.|++.+++.|.++|.+|+++ ....
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4566655443 3 899999999999999999999 6543
No 143
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=21.18 E-value=26 Score=34.26 Aligned_cols=34 Identities=29% Similarity=0.282 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 8 RATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
+.|||+++=.+-.| ..||+.|.+.||+||++-..
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 46888887665444 57999999999999998753
No 144
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=21.17 E-value=1.4e+02 Score=22.37 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=23.2
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-------CCCceeEechh
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-------NIVRITFFSSG 145 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-------giP~i~~~~~~ 145 (443)
.+++. +||+||.|.... .+..+.+.+ ++|+|.++...
T Consensus 45 ~l~~~--~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 45 QVARR--PYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHS--CCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHhC--CCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 34555 899999997654 355544432 46777665544
No 145
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=21.10 E-value=52 Score=30.24 Aligned_cols=25 Identities=8% Similarity=0.086 Sum_probs=19.9
Q ss_pred CChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 21 GHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 21 gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|.+- ..+|+++.++|++||+++.+.
T Consensus 65 GkmG--~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 65 GRRG--ATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CHHH--HHHHHHHHHTTCEEEEEEETT
T ss_pred cHHH--HHHHHHHHHCCCEEEEEecCC
Confidence 5544 367899999999999999754
No 146
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=21.10 E-value=1.8e+02 Score=20.72 Aligned_cols=36 Identities=19% Similarity=0.113 Sum_probs=22.3
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-----CCCceeEech
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-----NIVRITFFSS 144 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-----giP~i~~~~~ 144 (443)
.+... +||++|.|...+ .+..+.+.+ ++|++.++..
T Consensus 40 ~~~~~--~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 40 KFFSG--NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHS--CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhcC--CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 34455 799999997654 344444332 4677766554
No 147
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=21.07 E-value=1.7e+02 Score=27.14 Aligned_cols=94 Identities=12% Similarity=0.018 Sum_probs=0.0
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCCCchhhhhhccCCCCee--EEEeCCCCCCCCCCCcccccccCCCCh
Q 044731 13 LIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPKNLPIVSSLLDARPAIQ--TLVLPFPSHPSVPAGVENVKELGNRGN 90 (443)
Q Consensus 13 li~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~~~~~v~~~~~~~~~i~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ 90 (443)
+.+...+.|-..-...|+++|.++| +|.+.++............ .++. .. +|++
T Consensus 43 iwih~~s~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~--~~v~~~~~-~p~~-------------------- 98 (374)
T 2xci_A 43 LWVHTASIGEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKS--DFYDCLHP-LPLD-------------------- 98 (374)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTG--GGCSEEEE-CCCS--------------------
T ss_pred EEEEcCCHHHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhc--ccccceeE-CCCC--------------------
Q ss_pred HHHHHHHhhhhHHHHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeEe
Q 044731 91 LPIMSALGKLYDPIIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITFF 142 (443)
Q Consensus 91 ~~~~~~~~~~~~~~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~ 142 (443)
....+.+++++. +||+|++-....|...++...+ |++.+.
T Consensus 99 ---------~~~~l~~~l~~~--~pDiv~~~~~~~~~~~~~~~~~-p~~~~~ 138 (374)
T 2xci_A 99 ---------NPFSVKRFEELS--KPKALIVVEREFWPSLIIFTKV-PKILVN 138 (374)
T ss_dssp ---------SHHHHHHHHHHH--CCSEEEEESCCCCHHHHHHCCS-CEEEEE
T ss_pred ---------CHHHHHHHHHHh--CCCEEEEECccCcHHHHHHHhC-CEEEEE
No 148
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=20.96 E-value=1.4e+02 Score=21.65 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=21.2
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-----CCCceeEechh
Q 044731 114 PPVAILSDFFLG--WTLNLAREL-----NIVRITFFSSG 145 (443)
Q Consensus 114 ~~D~vI~D~~~~--~~~~vA~~l-----giP~i~~~~~~ 145 (443)
+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 799999998654 345444432 57777776554
No 149
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.92 E-value=1.4e+02 Score=25.09 Aligned_cols=33 Identities=6% Similarity=-0.035 Sum_probs=22.8
Q ss_pred CCcEEEEEcCCCCCChH----HHHHHHHHHHhCCceEE
Q 044731 8 RATHVLIFPYPAQGHML----PLLDLTHQLSLKNLDIT 41 (443)
Q Consensus 8 ~~~~ili~~~~~~gH~~----P~l~La~~L~~rGh~Vt 41 (443)
.++.|.++.... +.-. --..|++.|+++||.|.
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv 48 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLV 48 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEE
Confidence 347899988766 4433 45677788889999644
No 150
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=20.82 E-value=1.4e+02 Score=21.62 Aligned_cols=38 Identities=24% Similarity=0.175 Sum_probs=23.8
Q ss_pred HHHHhCCCCCcEEEeCCCcc--hHHHHHHHh----CCCceeEechh
Q 044731 106 QWFHSHANPPVAILSDFFLG--WTLNLAREL----NIVRITFFSSG 145 (443)
Q Consensus 106 ~ll~~~~~~~D~vI~D~~~~--~~~~vA~~l----giP~i~~~~~~ 145 (443)
.++... +||++|.|...+ .+..+.+.+ ++|+|.++...
T Consensus 40 ~~~~~~--~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 40 EIMQNQ--SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp HHHHHS--CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHhcC--CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 344555 799999997654 355555544 46766665543
No 151
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=20.66 E-value=82 Score=30.62 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=23.8
Q ss_pred HHHHHHhCCCCCcEEEeCCCcchHHHHHHHhCCCceeE
Q 044731 104 IIQWFHSHANPPVAILSDFFLGWTLNLARELNIVRITF 141 (443)
Q Consensus 104 ~~~ll~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~ 141 (443)
+++++++. ++|++|.... ...+|+++|||++.+
T Consensus 367 le~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAG--QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 45556665 7899988754 567888999997644
No 152
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=20.65 E-value=38 Score=24.57 Aligned_cols=57 Identities=9% Similarity=0.113 Sum_probs=32.1
Q ss_pred CCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 044731 378 SVPDSDELGKVIGESLSQCGETKIKARELRDKALAAVKSGGSSTRDLETLVQELRKLR 435 (443)
Q Consensus 378 ~~~t~e~l~~ai~~vl~~~~~yr~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~~~ 435 (443)
+.++.++|+.+++..+.+.-.....-..+.+.++.+ ...|...-++++|+..+....
T Consensus 26 G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~-D~d~dG~I~f~EF~~~~~~~~ 82 (95)
T 1j55_A 26 QTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDL-DANGDAQVDFSEFIVFVAAIT 82 (95)
T ss_dssp TEECHHHHHHHHHHHSTTCC------CHHHHHHHHH-CSSSSSSEEHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHHH
Confidence 578999999999875321000111223566666655 434444457778877766543
No 153
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=20.44 E-value=1.4e+02 Score=23.07 Aligned_cols=38 Identities=11% Similarity=0.106 Sum_probs=23.7
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-----CCCceeEechhH
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-----NIVRITFFSSGS 146 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-----giP~i~~~~~~~ 146 (443)
.+.+. +||+||.|.... .+..+.+.+ ++|+|.++....
T Consensus 46 ~l~~~--~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 46 ALKGT--SVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHTTS--CCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHhcC--CCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 34444 799999997654 344444332 578877766543
No 154
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=20.43 E-value=1.5e+02 Score=26.07 Aligned_cols=39 Identities=10% Similarity=0.327 Sum_probs=30.5
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhC--CCceEEEEeC
Q 044731 280 GSVVYACFGSQKVLSKEQMEALALGLEKS--GIRFLWVVKT 318 (443)
Q Consensus 280 ~~vVyvSfGS~~~~~~~~~~~i~~al~~~--~~~~lw~~~~ 318 (443)
.++++++|||-..-..+.+..+.+.+++. +.+|-|.+..
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 46999999998766666788888888763 4688888765
No 155
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=20.39 E-value=2.1e+02 Score=23.36 Aligned_cols=46 Identities=7% Similarity=0.069 Sum_probs=29.1
Q ss_pred CCCCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 1 MSSCSNSRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 1 ~~~~~~~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
|....+-+.++|+|+.+++.. ..-+......|...|++|++++...
T Consensus 1 m~~~~~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 1 MTKAKDLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp -----CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCCCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 334333345689998776544 3345556678888999999998753
No 156
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=20.30 E-value=53 Score=30.22 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=24.9
Q ss_pred CCCCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 1 MSSCSNSRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 1 ~~~~~~~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
||++. ..+|.|+=.+..| ..+|..|+++||+|+++...
T Consensus 1 m~~~~---~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MASPA---AGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---------CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCCC---CceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 55543 4578888665555 57889999999999998653
No 157
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=20.18 E-value=1.1e+02 Score=29.51 Aligned_cols=40 Identities=15% Similarity=0.124 Sum_probs=27.1
Q ss_pred CCCCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeC
Q 044731 1 MSSCSNSRATHVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILIT 45 (443)
Q Consensus 1 ~~~~~~~~~~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~ 45 (443)
|..+..-+..||+|+=.+..| +.+|+.|+++||+|+..-.
T Consensus 1 m~~~~~~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 1 MKTITTFENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp ---CCTTTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CcchhhcCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 434433344588888776544 3569999999999998755
No 158
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=20.13 E-value=87 Score=28.50 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=25.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCceEEEEeCCC
Q 044731 10 THVLIFPYPAQGHMLPLLDLTHQLSLKNLDITILITPK 47 (443)
Q Consensus 10 ~~ili~~~~~~gH~~P~l~La~~L~~rGh~Vt~~t~~~ 47 (443)
++|+|+=.++.| ..+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh
Confidence 578888666555 467889999999999998654
No 159
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=20.09 E-value=1.4e+02 Score=22.11 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=21.4
Q ss_pred HHHhCCCCCcEEEeCCCcc--hHHHHHHHh-----CCCceeEechh
Q 044731 107 WFHSHANPPVAILSDFFLG--WTLNLAREL-----NIVRITFFSSG 145 (443)
Q Consensus 107 ll~~~~~~~D~vI~D~~~~--~~~~vA~~l-----giP~i~~~~~~ 145 (443)
.+++. +||+||.|.... .+..+.+.+ ++|+|.++...
T Consensus 46 ~l~~~--~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 46 LLGGF--TPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHTTC--CCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHhcC--CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 34454 799999997654 234444332 47777776544
No 160
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=20.02 E-value=1.4e+02 Score=22.27 Aligned_cols=39 Identities=15% Similarity=0.200 Sum_probs=24.0
Q ss_pred HHHHhCCCCCcEEEeCCCcc-------hHHHHHHHh-----CCCceeEechhH
Q 044731 106 QWFHSHANPPVAILSDFFLG-------WTLNLAREL-----NIVRITFFSSGS 146 (443)
Q Consensus 106 ~ll~~~~~~~D~vI~D~~~~-------~~~~vA~~l-----giP~i~~~~~~~ 146 (443)
+.+++. +||+||.|.... .+..+.+.+ ++|+|.++....
T Consensus 41 ~~l~~~--~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 41 TVLREE--NPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp HHHHHS--CEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred HHHHcC--CCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 344555 799999997543 344443332 678887766543
No 161
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=20.01 E-value=1.9e+02 Score=25.28 Aligned_cols=38 Identities=11% Similarity=0.141 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCCC-----------ChHHHHHHHHHHHhCCceEEEEeCC
Q 044731 9 ATHVLIFPYPAQG-----------HMLPLLDLTHQLSLKNLDITILITP 46 (443)
Q Consensus 9 ~~~ili~~~~~~g-----------H~~P~l~La~~L~~rGh~Vt~~t~~ 46 (443)
+.+|+++-....+ +..=+..-...|.+.|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3477777655322 1344566668899999999999864
Done!