Query 044733
Match_columns 99
No_of_seqs 91 out of 93
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 10:35:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044733.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044733hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fk5a_ a.52.1.1 (A:) Plant no 28.2 21 0.0015 21.2 2.7 34 53-91 4-38 (93)
2 d1mida_ a.52.1.1 (A:) Plant no 27.7 21 0.0016 21.1 2.7 33 53-90 3-35 (91)
3 d1k8rb_ d.15.1.5 (B:) Protein 8.7 68 0.005 19.6 1.5 17 57-73 14-30 (95)
4 d1tswa_ d.117.1.1 (A:) Thymidy 6.7 85 0.0062 22.6 1.4 19 59-78 53-71 (316)
5 d1tuka1 a.52.1.1 (A:1-67) Non- 5.9 2.4E+02 0.018 15.8 3.0 16 51-66 22-37 (67)
6 d1p4oa_ d.144.1.7 (A:) Insulin 5.6 1.8E+02 0.013 19.1 2.6 33 64-96 241-274 (308)
7 d1hssa_ a.52.1.2 (A:) 0.19 alp 5.3 1.3E+02 0.0095 19.0 1.5 17 78-94 33-49 (120)
8 d1f28a_ d.117.1.1 (A:) Thymidy 4.8 1.2E+02 0.0088 21.6 1.2 19 59-78 56-74 (295)
9 d1j3kc_ d.117.1.1 (C:) Bifunct 4.8 1.2E+02 0.0087 21.9 1.2 19 59-78 93-111 (326)
10 d1g8qa_ a.135.1.1 (A:) CD81 ex 4.8 2.3E+02 0.017 16.5 2.4 17 58-75 73-89 (90)
No 1
>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}
Probab=28.23 E-value=21 Score=21.19 Aligned_cols=34 Identities=12% Similarity=0.364 Sum_probs=22.1
Q ss_pred HhhhhhcccchHHHHHHHHHhCcc-ccChhhhHHHHHhhh
Q 044733 53 CWNTLMELKSCSNEIVVFFLNSQA-NIRPDYCRAIDIITR 91 (99)
Q Consensus 53 Cwssl~~v~gC~~EI~~sf~nG~~-~igp~CCkAi~~i~~ 91 (99)
|=+.+.++-.|. .|++|.. .-++.||.+++.+.+
T Consensus 4 C~~v~~~l~pCl-----~Yltg~~~~Ps~~CC~gv~~l~~ 38 (93)
T d1fk5a_ 4 CGQVASAIAPCI-----SYARGQGSGPSAGCCSGVRSLNN 38 (93)
T ss_dssp HHHHHHHHGGGH-----HHHTTCSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhH-----HHHhCCCCCCCCchhHHHHHHHH
Confidence 445555555564 3456655 578899999988753
No 2
>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=27.74 E-value=21 Score=21.08 Aligned_cols=33 Identities=12% Similarity=0.401 Sum_probs=22.3
Q ss_pred HhhhhhcccchHHHHHHHHHhCccccChhhhHHHHHhh
Q 044733 53 CWNTLMELKSCSNEIVVFFLNSQANIRPDYCRAIDIIT 90 (99)
Q Consensus 53 Cwssl~~v~gC~~EI~~sf~nG~~~igp~CCkAi~~i~ 90 (99)
|=+.+..+-.|.. |++|.....+.||.+++.+.
T Consensus 3 C~~v~~~l~pCl~-----Yl~g~~~P~~~CC~gv~~L~ 35 (91)
T d1mida_ 3 CGQVDSKMKPCLT-----YVQGGPGPSGECCNGVRDLH 35 (91)
T ss_dssp HHHHHHHHGGGHH-----HHTTCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHH-----HHcCCCCCCcchhhhHHHHH
Confidence 4445555555643 45566678899999998875
No 3
>d1k8rb_ d.15.1.5 (B:) Protein kinase byr2 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=8.71 E-value=68 Score=19.63 Aligned_cols=17 Identities=6% Similarity=0.094 Sum_probs=13.3
Q ss_pred hhcccchHHHHHHHHHh
Q 044733 57 LMELKSCSNEIVVFFLN 73 (99)
Q Consensus 57 l~~v~gC~~EI~~sf~n 73 (99)
..++.||.+||+.-++.
T Consensus 14 ~vni~gC~~ai~~~~Lk 30 (95)
T d1k8rb_ 14 AVQSRGDYQKTLAIALK 30 (95)
T ss_dssp EEECCSCHHHHHHHHHH
T ss_pred EEEeccCHHHHHHHHHH
Confidence 57899999998766554
No 4
>d1tswa_ d.117.1.1 (A:) Thymidylate synthase {Lactobacillus casei [TaxId: 1582]}
Probab=6.74 E-value=85 Score=22.59 Aligned_cols=19 Identities=26% Similarity=0.560 Sum_probs=15.6
Q ss_pred cccchHHHHHHHHHhCcccc
Q 044733 59 ELKSCSNEIVVFFLNSQANI 78 (99)
Q Consensus 59 ~v~gC~~EI~~sf~nG~~~i 78 (99)
-.+|++.|+ .+|++|++++
T Consensus 53 ~~k~ii~EL-LWfl~G~tn~ 71 (316)
T d1tswa_ 53 PFGLIKSEL-LWFLHGDTNI 71 (316)
T ss_dssp CHHHHHHHH-HHHHTTCCBT
T ss_pred hHHHHHHHH-HHHHhcCccH
Confidence 357899999 8899999864
No 5
>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}
Probab=5.86 E-value=2.4e+02 Score=15.82 Aligned_cols=16 Identities=25% Similarity=0.524 Sum_probs=8.1
Q ss_pred hhHhhhhhcccchHHH
Q 044733 51 TECWNTLMELKSCSNE 66 (99)
Q Consensus 51 ~kCwssl~~v~gC~~E 66 (99)
.+|=+-|++-|+|.=+
T Consensus 22 ~~CC~kLkeQ~~ClC~ 37 (67)
T d1tuka1 22 GECCGNLRAQQGCFCQ 37 (67)
T ss_dssp HHHHHHHHHHGGGHHH
T ss_pred HHHHHHHHhcCCccce
Confidence 3455555555555443
No 6
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.56 E-value=1.8e+02 Score=19.14 Aligned_cols=33 Identities=12% Similarity=0.356 Sum_probs=25.3
Q ss_pred HHHHHHHHHhCcc-ccChhhhHHHHHhhhcccCC
Q 044733 64 SNEIVVFFLNSQA-NIRPDYCRAIDIITRNCWPA 96 (99)
Q Consensus 64 ~~EI~~sf~nG~~-~igp~CCkAi~~i~~~CwP~ 96 (99)
..|++..+.+|+. .+-+.|-..+..+-..||-.
T Consensus 241 ~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~ 274 (308)
T d1p4oa_ 241 NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQY 274 (308)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCC
Confidence 4567777888887 66677778888898999954
No 7
>d1hssa_ a.52.1.2 (A:) 0.19 alpha-amylase inhibitor {Wheat (Triticum aestivum) [TaxId: 4565]}
Probab=5.29 E-value=1.3e+02 Score=18.95 Aligned_cols=17 Identities=24% Similarity=0.579 Sum_probs=13.2
Q ss_pred cChhhhHHHHHhhhccc
Q 044733 78 IRPDYCRAIDIITRNCW 94 (99)
Q Consensus 78 igp~CCkAi~~i~~~Cw 94 (99)
+-..||+-+..|.+.|.
T Consensus 33 ~k~~CC~eLa~i~~~CR 49 (120)
T d1hssa_ 33 VLRDCCQQLAHISEWCR 49 (120)
T ss_dssp HHHHHHHHHHTSCTTTH
T ss_pred HHHHHHHHHHhcCcccc
Confidence 44779998888888774
No 8
>d1f28a_ d.117.1.1 (A:) Thymidylate synthase {Pneumocystis carinii [TaxId: 4754]}
Probab=4.81 E-value=1.2e+02 Score=21.59 Aligned_cols=19 Identities=11% Similarity=0.459 Sum_probs=15.3
Q ss_pred cccchHHHHHHHHHhCcccc
Q 044733 59 ELKSCSNEIVVFFLNSQANI 78 (99)
Q Consensus 59 ~v~gC~~EI~~sf~nG~~~i 78 (99)
-.++++.|+ .+|++|++++
T Consensus 56 ~~k~vi~EL-LWfl~G~tn~ 74 (295)
T d1f28a_ 56 FIRGVIEEL-LWFIRGETDS 74 (295)
T ss_dssp CHHHHHHHH-HHHHTTCCBH
T ss_pred hHHHHHHHH-HHHHhccchH
Confidence 357889999 8889999854
No 9
>d1j3kc_ d.117.1.1 (C:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=4.80 E-value=1.2e+02 Score=21.91 Aligned_cols=19 Identities=21% Similarity=0.441 Sum_probs=15.8
Q ss_pred cccchHHHHHHHHHhCcccc
Q 044733 59 ELKSCSNEIVVFFLNSQANI 78 (99)
Q Consensus 59 ~v~gC~~EI~~sf~nG~~~i 78 (99)
-.++++.|+ .+|++|++++
T Consensus 93 ~~K~vi~EL-LWfL~G~tn~ 111 (326)
T d1j3kc_ 93 FLRGIIEEL-LWFIRGETNG 111 (326)
T ss_dssp CCHHHHHHH-HHHHTTCCBH
T ss_pred hHHHHHHHH-HHHHhCCcch
Confidence 467899999 8999999864
No 10
>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.77 E-value=2.3e+02 Score=16.47 Aligned_cols=17 Identities=12% Similarity=0.297 Sum_probs=11.8
Q ss_pred hcccchHHHHHHHHHhCc
Q 044733 58 MELKSCSNEIVVFFLNSQ 75 (99)
Q Consensus 58 ~~v~gC~~EI~~sf~nG~ 75 (99)
...++|-.+| .-+|++|
T Consensus 73 l~~~~C~~~I-~evF~~K 89 (90)
T d1g8qa_ 73 LFKEDCHQKI-DDLFSGK 89 (90)
T ss_dssp HTSCCHHHHH-HHHHHTC
T ss_pred ccCCCchHHH-HHHHccC
Confidence 3458999999 5555554
Done!