BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044735
GSESFPFVNQTAIIFFPLNLTKRVHFIEPHQSSNPIQIGNRNKPPHFISPTHKAEKLPPC
IQKGFMTTIMASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKP
EETPAASSGSGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQ
VQD

High Scoring Gene Products

Symbol, full name Information P value
AT2G27730 protein from Arabidopsis thaliana 5.2e-26
AT5G04750 protein from Arabidopsis thaliana 6.6e-06
if1 gene from Dictyostelium discoideum 0.00039

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044735
        (183 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2042001 - symbol:AT2G27730 "AT2G27730" species...   294  5.2e-26   1
TAIR|locus:2175468 - symbol:AT5G04750 species:3702 "Arabi...   105  6.6e-06   1
DICTYBASE|DDB_G0291988 - symbol:if1 species:44689 "Dictyo...    90  0.00039   1


>TAIR|locus:2042001 [details] [associations]
            symbol:AT2G27730 "AT2G27730" species:3702 "Arabidopsis
            thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0009853 "photorespiration" evidence=RCA;TAS] [GO:0031966
            "mitochondrial membrane" evidence=IDA] [GO:0045271 "respiratory
            chain complex I" evidence=IDA] [GO:0005747 "mitochondrial
            respiratory chain complex I" evidence=IDA] [GO:0005507 "copper ion
            binding" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=RCA] [GO:0051788 "response to misfolded
            protein" evidence=RCA] [GO:0080129 "proteasome core complex
            assembly" evidence=RCA] GO:GO:0005773 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0005507 GO:GO:0005747
            GO:GO:0009853 EMBL:AC005824 EMBL:AY059074 EMBL:AY035140
            EMBL:AY087283 IPI:IPI00522268 PIR:C84676 RefSeq:NP_565657.1
            UniGene:At.23025 IntAct:Q9ZUX4 MINT:MINT-4330304 STRING:Q9ZUX4
            PaxDb:Q9ZUX4 PRIDE:Q9ZUX4 EnsemblPlants:AT2G27730.1 GeneID:817319
            KEGG:ath:AT2G27730 GeneFarm:2324 TAIR:At2g27730 eggNOG:NOG270646
            HOGENOM:HOG000242969 InParanoid:Q9ZUX4 OMA:KGPKPEE PhylomeDB:Q9ZUX4
            ProtClustDB:CLSN2723078 BioCyc:ARA:AT2G27730-MONOMER
            BioCyc:MetaCyc:AT2G27730-MONOMER Genevestigator:Q9ZUX4
            GermOnline:AT2G27730 Uniprot:Q9ZUX4
        Length = 113

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 65/115 (56%), Positives = 86/115 (74%)

Query:    70 MASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSG 129
             MA+R A+R  SRRFSS GKVLSEEE+AAENV+IKK+EQEKL+K+AR+GP  +   +AS  
Sbjct:     1 MATRNALRIVSRRFSS-GKVLSEEERAAENVFIKKMEQEKLQKLARQGPGEQAAGSASEA 59

Query:   130 SGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKE-QVQD 183
               A A   SA+  S  KVS D+ RNYAV+AG++  V ++GWYLK+  KK+ +VQ+
Sbjct:    60 KVAGAT-ASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPEVQE 113


>TAIR|locus:2175468 [details] [associations]
            symbol:AT5G04750 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0042030 "ATPase inhibitor activity" evidence=ISS]
            EMBL:CP002688 EMBL:BT004559 EMBL:AK227307 IPI:IPI00541964
            RefSeq:NP_568140.2 UniGene:At.20111 UniGene:At.68528
            UniGene:At.70221 STRING:Q84W11 PRIDE:Q84W11
            EnsemblPlants:AT5G04750.1 GeneID:830353 KEGG:ath:AT5G04750
            TAIR:At5g04750 eggNOG:NOG291726 InParanoid:Q84W11 OMA:AKESMYI
            PhylomeDB:Q84W11 ProtClustDB:CLSN2690790 Genevestigator:Q84W11
            Uniprot:Q84W11
        Length = 94

 Score = 105 (42.0 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 30/76 (39%), Positives = 46/76 (60%)

Query:    62 QKGFMTTIMASR-IAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKP 120
             Q G   +++++R  A+R FS      G+VLSEEE+A E++YI+K+E+E+LEK  +K  K 
Sbjct:    21 QIGASRSVVSTRGPAIRYFS---DDKGRVLSEEERAKESMYIQKMERERLEK--KK--KL 73

Query:   121 EETPAASSGSGAEAKP 136
             E+         A  KP
Sbjct:    74 EQDKLDGEKGSANKKP 89


>DICTYBASE|DDB_G0291988 [details] [associations]
            symbol:if1 species:44689 "Dictyostelium discoideum"
            [GO:0045980 "negative regulation of nucleotide metabolic process"
            evidence=IEA] [GO:0043086 "negative regulation of catalytic
            activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR007648 Pfam:PF04568
            dictyBase:DDB_G0291988 GO:GO:0005739 GenomeReviews:CM000155_GR
            EMBL:AAFI02000187 GO:GO:0004857 GO:GO:0043086 GO:GO:0045980
            EMBL:AF311910 RefSeq:XP_629854.1 PRIDE:Q9GSE7
            EnsemblProtists:DDB0216175 GeneID:8628535 KEGG:ddi:DDB_G0291988
            OMA:NNDIRER Uniprot:Q9GSE7
        Length = 105

 Score = 90 (36.7 bits), Expect = 0.00039, P = 0.00039
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query:    71 ASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSGS 130
             AS IA    S  F   G    E E+A E+ Y+K+ E++ L++MA K  K EET  A    
Sbjct:    14 ASMIAAPKRSIAFR--GDEFKEREEAFESQYVKQKERDDLKRMAEK-KKQEETKKA---- 66

Query:   131 GAEAKPTSAAGASTEKVS 148
             G++  P +++ A+  K +
Sbjct:    67 GSQPTPNASSSANNSKAA 84


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.127   0.356    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      183       183   0.00076  110 3  11 23  0.50    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  137 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.84u 0.09s 26.93t   Elapsed:  00:00:01
  Total cpu time:  26.84u 0.09s 26.93t   Elapsed:  00:00:01
  Start:  Fri May 10 07:38:29 2013   End:  Fri May 10 07:38:30 2013

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