Query 044735
Match_columns 183
No_of_seqs 47 out of 49
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 10:38:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044735.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044735hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zbdb_ g.50.1.1 (B:) Effector 45.7 6.3 0.00046 26.8 2.6 29 90-118 3-37 (124)
2 d1vkza1 b.84.2.1 (A:314-399) G 32.3 6 0.00043 26.0 0.6 21 81-101 42-68 (86)
3 d1gsoa1 b.84.2.1 (A:328-426) G 30.6 6.6 0.00048 26.3 0.7 22 81-102 49-76 (99)
4 d1avgi_ b.60.1.3 (I:) Thrombin 17.4 18 0.0013 24.1 0.7 13 146-159 98-110 (142)
5 d1x8qa_ b.60.1.1 (A:) Nitropho 15.5 20 0.0015 24.3 0.7 15 147-163 110-124 (184)
6 d1kv9a1 a.3.1.6 (A:561-664) Qu 13.1 91 0.0066 19.0 3.4 29 83-111 73-101 (104)
7 d1pm1x_ b.60.1.1 (X:) Nitropho 11.4 32 0.0023 22.3 0.7 12 147-160 110-121 (180)
8 d2chua1 c.92.2.4 (A:24-310) En 10.9 64 0.0047 22.8 2.3 31 87-120 131-161 (287)
9 d1c53a_ a.3.1.1 (A:) Cytochrom 10.6 52 0.0038 19.0 1.4 19 87-105 61-79 (79)
10 d1j46a_ a.21.1.1 (A:) SRY {Hum 10.6 1.6E+02 0.011 17.9 3.9 27 87-116 43-69 (85)
No 1
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.70 E-value=6.3 Score=26.78 Aligned_cols=29 Identities=28% Similarity=0.463 Sum_probs=19.4
Q ss_pred cCHHHHh------hhhhhHHHHHHHHHHHHHhcCC
Q 044735 90 LSEEEKA------AENVYIKKVEQEKLEKMARKGP 118 (183)
Q Consensus 90 lsEeErA------aENvYIkK~E~EkLEKl~rk~~ 118 (183)
|+|||+. +...++++.|++++.+|+.+..
T Consensus 3 LT~eE~~~i~~VL~r~~~l~~~E~~rl~~l~~~l~ 37 (124)
T d1zbdb_ 3 LTDEEKEIINRVIARAEKMETMEQERIGRLVDRLE 37 (124)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666654 3445667778888888876543
No 2
>d1vkza1 b.84.2.1 (A:314-399) Glycinamide ribonucleotide synthetase (GAR-syn), C-domain {Thermotoga maritima [TaxId: 2336]}
Probab=32.29 E-value=6 Score=26.04 Aligned_cols=21 Identities=29% Similarity=0.583 Sum_probs=17.2
Q ss_pred ccccCCCcccC------HHHHhhhhhh
Q 044735 81 RRFSSSGKVLS------EEEKAAENVY 101 (183)
Q Consensus 81 R~fSsgGkvls------EeErAaENvY 101 (183)
+++++|||||+ .=+.|.+++|
T Consensus 42 ~l~t~GGRVl~v~a~g~~l~~A~~~aY 68 (86)
T d1vkza1 42 KLVTNGGRVLHCMGTGETKEEARRKAY 68 (86)
T ss_dssp EEEECSSEEEEEEEEESSHHHHHHHHH
T ss_pred eEEEcCCEEEEEEEeCCCHHHHHHHHH
Confidence 88999999995 5567788877
No 3
>d1gsoa1 b.84.2.1 (A:328-426) Glycinamide ribonucleotide synthetase (GAR-syn), C-domain {Escherichia coli [TaxId: 562]}
Probab=30.59 E-value=6.6 Score=26.27 Aligned_cols=22 Identities=23% Similarity=0.443 Sum_probs=17.3
Q ss_pred ccccCCCcccC------HHHHhhhhhhH
Q 044735 81 RRFSSSGKVLS------EEEKAAENVYI 102 (183)
Q Consensus 81 R~fSsgGkvls------EeErAaENvYI 102 (183)
.++++|||||+ .=+.|.+++|-
T Consensus 49 ~l~t~GGRVL~v~~~g~tl~~A~~~aY~ 76 (99)
T d1gsoa1 49 QVVTNGGRVLCVTALGHTVAEAQKRAYA 76 (99)
T ss_dssp CEEECSSEEEEEEEEESSHHHHHHHHHH
T ss_pred cEecCCCeEEEEEEecCCHHHHHHHHHH
Confidence 68899999996 45678888873
No 4
>d1avgi_ b.60.1.3 (I:) Thrombin inhibitor {Triatomine bug (Triatoma pallidipennis) [TaxId: 30077]}
Probab=17.37 E-value=18 Score=24.07 Aligned_cols=13 Identities=31% Similarity=0.685 Sum_probs=10.0
Q ss_pred Ccccccccceeeeh
Q 044735 146 KVSTDQYRNYAVIA 159 (183)
Q Consensus 146 ~VSTDk~rNYAV~A 159 (183)
=++|| |.|||||-
T Consensus 98 Vl~TD-Y~nYAlVy 110 (142)
T d1avgi_ 98 FISVS-YDNFALVC 110 (142)
T ss_dssp EEEEC-TTSEEEEE
T ss_pred EEEcC-CCcEEEEE
Confidence 45677 88999984
No 5
>d1x8qa_ b.60.1.1 (A:) Nitrophorin 4 {Rhodnius prolixus [TaxId: 13249]}
Probab=15.46 E-value=20 Score=24.26 Aligned_cols=15 Identities=20% Similarity=0.200 Sum_probs=10.7
Q ss_pred cccccccceeeehhHHH
Q 044735 147 VSTDQYRNYAVIAGIIT 163 (183)
Q Consensus 147 VSTDk~rNYAV~AGtVa 163 (183)
++|| + |||+|---+.
T Consensus 110 l~TD-y-nYAlvy~C~~ 124 (184)
T d1x8qa_ 110 MYAD-D-SSALIHTCLH 124 (184)
T ss_dssp EEEC-S-SEEEEEEEEE
T ss_pred EEec-C-CEEEEEEecc
Confidence 6899 6 8999854333
No 6
>d1kv9a1 a.3.1.6 (A:561-664) Quinoprotein alcohol dehydrogenase, C-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=13.06 E-value=91 Score=19.04 Aligned_cols=29 Identities=24% Similarity=0.248 Sum_probs=22.3
Q ss_pred ccCCCcccCHHHHhhhhhhHHHHHHHHHH
Q 044735 83 FSSSGKVLSEEEKAAENVYIKKVEQEKLE 111 (183)
Q Consensus 83 fSsgGkvlsEeErAaENvYIkK~E~EkLE 111 (183)
|-.-|..||+||..+=--||+...++..+
T Consensus 73 Mp~~~~~Lsd~ei~~v~aYi~s~~~~~~~ 101 (104)
T d1kv9a1 73 MPSFDDSLKPEEVEQIKLYVMSREYEDYM 101 (104)
T ss_dssp CCCCTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCHHHHHHHHHHHHHhCcchhh
Confidence 43337799999999999999987776543
No 7
>d1pm1x_ b.60.1.1 (X:) Nitrophorin 2 (prolixin-s) {Rhodnius prolixus [TaxId: 13249]}
Probab=11.42 E-value=32 Score=22.29 Aligned_cols=12 Identities=17% Similarity=0.155 Sum_probs=8.8
Q ss_pred cccccccceeeehh
Q 044735 147 VSTDQYRNYAVIAG 160 (183)
Q Consensus 147 VSTDk~rNYAV~AG 160 (183)
++|| | |||||-.
T Consensus 110 l~TD-Y-~YAlVy~ 121 (180)
T d1pm1x_ 110 LEAD-D-SSALVHI 121 (180)
T ss_dssp EEEC-S-SEEEEEE
T ss_pred EecC-C-CEEEEEE
Confidence 6778 5 7999843
No 8
>d2chua1 c.92.2.4 (A:24-310) Enterochelin uptake protein CeuE {Campylobacter jejuni [TaxId: 197]}
Probab=10.94 E-value=64 Score=22.82 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=22.3
Q ss_pred CcccCHHHHhhhhhhHHHHHHHHHHHHHhcCCCC
Q 044735 87 GKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKP 120 (183)
Q Consensus 87 GkvlsEeErAaENvYIkK~E~EkLEKl~rk~~k~ 120 (183)
|++|..+++|.| ++..|++ ++++++++..+.
T Consensus 131 g~~~g~~~~a~~--~~~~~~~-~~~~~~~~~~~~ 161 (287)
T d2chua1 131 AKLYGLEKEALE--KISDIKN-EIEKAKSIVDED 161 (287)
T ss_dssp HHHHTCHHHHHH--HHHHHHH-HHHHHHHTCCTT
T ss_pred HHhcCchhhHHH--HHHHHHH-HHHHHHHhhccC
Confidence 788888898854 5788875 577877665443
No 9
>d1c53a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Desulfovibrio vulgaris, different strains [TaxId: 881]}
Probab=10.65 E-value=52 Score=18.98 Aligned_cols=19 Identities=37% Similarity=0.366 Sum_probs=16.1
Q ss_pred CcccCHHHHhhhhhhHHHH
Q 044735 87 GKVLSEEEKAAENVYIKKV 105 (183)
Q Consensus 87 GkvlsEeErAaENvYIkK~ 105 (183)
++.||+||-++=--||+.|
T Consensus 61 ~~~Lsd~ei~~l~aYi~sL 79 (79)
T d1c53a_ 61 VKRYSDEEMKAMADYMSKL 79 (79)
T ss_pred HhcCCHHHHHHHHHHHHhC
Confidence 6789999999988898753
No 10
>d1j46a_ a.21.1.1 (A:) SRY {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.56 E-value=1.6e+02 Score=17.90 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=20.8
Q ss_pred CcccCHHHHhhhhhhHHHHHHHHHHHHHhc
Q 044735 87 GKVLSEEEKAAENVYIKKVEQEKLEKMARK 116 (183)
Q Consensus 87 GkvlsEeErAaENvYIkK~E~EkLEKl~rk 116 (183)
-+.|++|||. .|.++.+.++.+=.+..
T Consensus 43 W~~L~~eeK~---~y~~~A~~~k~~y~~~~ 69 (85)
T d1j46a_ 43 WKMLTEAEKW---PFFQEAQKLQAMHREKY 69 (85)
T ss_dssp HTTSCHHHHH---HHHHHHHHHHHHHHHHC
T ss_pred HhcCCHHHHH---HHHHHHHHHHHHHHHHh
Confidence 4789999998 59998888877665443
Done!