Query 044736
Match_columns 126
No_of_seqs 30 out of 32
Neff 2.5
Searched_HMMs 13730
Date Mon Mar 25 10:40:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044736.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044736hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cr5a2 d.31.1.1 (A:108-210) C 43.2 2.7 0.00019 27.8 0.3 26 83-108 24-49 (103)
2 d1qcsa2 d.31.1.1 (A:86-201) C- 40.1 3.1 0.00022 28.1 0.2 33 83-116 24-56 (116)
3 d1of5a_ d.17.4.2 (A:) NTF2-lik 36.5 9.8 0.00071 28.0 2.6 29 84-112 6-34 (221)
4 d2gsva1 a.23.7.1 (A:3-69) Hypo 28.6 15 0.0011 23.2 2.1 15 92-106 5-19 (67)
5 d1jkgb_ d.17.4.2 (B:) NTF2-lik 27.7 13 0.00098 26.1 2.0 29 83-111 9-38 (186)
6 d1jkga_ d.17.4.2 (A:) NTF2-rel 25.5 20 0.0015 23.4 2.4 32 86-119 7-41 (139)
7 d2pcsa1 d.129.3.10 (A:1-147) H 24.4 22 0.0016 21.2 2.3 17 87-103 128-144 (147)
8 d1ej5a_ a.68.1.1 (A:) Wiscott- 18.9 22 0.0016 23.8 1.5 21 83-103 35-56 (107)
9 d3dbya1 a.29.13.1 (A:5-125) Un 15.5 46 0.0033 22.0 2.5 27 82-108 29-55 (121)
10 d3dbya2 a.29.13.1 (A:126-260) 15.0 68 0.0049 21.3 3.3 23 82-104 27-49 (135)
No 1
>d1cr5a2 d.31.1.1 (A:108-210) C-terminal domain of NSF-N, NSF-Nc {Baker's yeast (Saccharomyces cerevisiae), sec18p [TaxId: 4932]}
Probab=43.20 E-value=2.7 Score=27.84 Aligned_cols=26 Identities=12% Similarity=0.217 Sum_probs=19.1
Q ss_pred CCCchhhhhHHHHHHHHHHHHhHhhh
Q 044736 83 DDNDNIDRNSEVFITNFRRRLLYERQ 108 (126)
Q Consensus 83 ~~~~dId~~Ae~FI~nFr~Ql~lqRq 108 (126)
+..=|-|+.|.+||.+|..|+.=-=|
T Consensus 24 ~~p~D~Dela~~F~~~F~~Q~ft~gQ 49 (103)
T d1cr5a2 24 STVFDQDELAKQFVRCYESQIFSPTQ 49 (103)
T ss_dssp --CCCHHHHHHHHHHHHTTCEECTTC
T ss_pred CCcccHHHHHHHHHHHhcCCCCCCCc
Confidence 45557899999999999998754433
No 2
>d1qcsa2 d.31.1.1 (A:86-201) C-terminal domain of NSF-N, NSF-Nc {Hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=40.15 E-value=3.1 Score=28.06 Aligned_cols=33 Identities=15% Similarity=0.284 Sum_probs=23.5
Q ss_pred CCCchhhhhHHHHHHHHHHHHhHhhhhhhhheeh
Q 044736 83 DDNDNIDRNSEVFITNFRRRLLYERQVSLELLYR 116 (126)
Q Consensus 83 ~~~~dId~~Ae~FI~nFr~Ql~lqRq~Slel~Y~ 116 (126)
+..=|-|+.|.+||.+|..|+--.=|.=+ ..|+
T Consensus 24 ~~p~D~Dela~~F~~~F~~Qift~gQ~l~-f~f~ 56 (116)
T d1qcsa2 24 SNPYDTDKMAAEFIQQFNNQAFSVGQQLV-FSFN 56 (116)
T ss_dssp CCEEEHHHHHHHHHHHHTTCEEETTCEEE-EEET
T ss_pred CCCcCHHHHHHHHHHHhCCCCcCCCcEEE-EEeC
Confidence 34458899999999999998765544433 4444
No 3
>d1of5a_ d.17.4.2 (A:) NTF2-like domain of mRNA export factor MEX67 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.51 E-value=9.8 Score=27.99 Aligned_cols=29 Identities=31% Similarity=0.384 Sum_probs=22.6
Q ss_pred CCchhhhhHHHHHHHHHHHHhHhhhhhhh
Q 044736 84 DNDNIDRNSEVFITNFRRRLLYERQVSLE 112 (126)
Q Consensus 84 ~~~dId~~Ae~FI~nFr~Ql~lqRq~Sle 112 (126)
.++++..-++.||++|+.---=.||.=|+
T Consensus 6 ~~~~~~~lv~~FL~~Yf~~yDsdR~~Ll~ 34 (221)
T d1of5a_ 6 ENDALGQSSTDFATNFLNLWDNNREQLLN 34 (221)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHCGGGGGG
T ss_pred cCHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 35678889999999998777668866553
No 4
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=28.58 E-value=15 Score=23.21 Aligned_cols=15 Identities=20% Similarity=0.437 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhHh
Q 044736 92 SEVFITNFRRRLLYE 106 (126)
Q Consensus 92 Ae~FI~nFr~Ql~lq 106 (126)
.+-||.||++.|.+-
T Consensus 5 v~~fi~Nf~~~i~mn 19 (67)
T d2gsva1 5 VPYFIENLKQHIEMN 19 (67)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhC
Confidence 467999999998753
No 5
>d1jkgb_ d.17.4.2 (B:) NTF2-like domain of Tip associating protein, TAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.72 E-value=13 Score=26.13 Aligned_cols=29 Identities=17% Similarity=0.123 Sum_probs=23.5
Q ss_pred CCCchhhhhHHHHHHHHHHHHhH-hhhhhh
Q 044736 83 DDNDNIDRNSEVFITNFRRRLLY-ERQVSL 111 (126)
Q Consensus 83 ~~~~dId~~Ae~FI~nFr~Ql~l-qRq~Sl 111 (126)
=.+++|-..++.|+++|+.---- .||.=+
T Consensus 9 f~~~~~~~lv~~Fl~~yf~~yDs~dR~~Ll 38 (186)
T d1jkgb_ 9 FGTENLKSLVLHFLQQYYAIYDSGDRQGLL 38 (186)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTSSCGGGGG
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCcCHHHHH
Confidence 35678999999999999987775 688644
No 6
>d1jkga_ d.17.4.2 (A:) NTF2-related export protein 1 (p15) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.47 E-value=20 Score=23.37 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=20.9
Q ss_pred chhhh---hHHHHHHHHHHHHhHhhhhhhhheehhcc
Q 044736 86 DNIDR---NSEVFITNFRRRLLYERQVSLELLYRRVN 119 (126)
Q Consensus 86 ~dId~---~Ae~FI~nFr~Ql~lqRq~Slel~Y~~~n 119 (126)
.+||. -|++|++.||.-|.=.| ..| .+++..+
T Consensus 7 ~~~~~a~~~a~~FV~~YY~~l~~~r-~~L-~~fY~~~ 41 (139)
T d1jkga_ 7 TYVDQACRAAEEFVNVYYTTMDKRR-RLL-SRLYMGT 41 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCG-GGG-GGGEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCH-HHH-HHHhCCC
Confidence 34554 89999999999876433 445 4444433
No 7
>d2pcsa1 d.129.3.10 (A:1-147) Hypothetical protein GKP20 {Geobacillus kaustophilus [TaxId: 1462]}
Probab=24.42 E-value=22 Score=21.15 Aligned_cols=17 Identities=6% Similarity=0.102 Sum_probs=12.7
Q ss_pred hhhhhHHHHHHHHHHHH
Q 044736 87 NIDRNSEVFITNFRRRL 103 (126)
Q Consensus 87 dId~~Ae~FI~nFr~Ql 103 (126)
-.++..++|++||.+++
T Consensus 128 ~~~~~~~~f~~~~~~~l 144 (147)
T d2pcsa1 128 VAKLLISDFFKKIQKEI 144 (147)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45677888888888765
No 8
>d1ej5a_ a.68.1.1 (A:) Wiscott-Aldrich syndrome protein, WASP, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.87 E-value=22 Score=23.80 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=16.3
Q ss_pred CCCchh-hhhHHHHHHHHHHHH
Q 044736 83 DDNDNI-DRNSEVFITNFRRRL 103 (126)
Q Consensus 83 ~~~~dI-d~~Ae~FI~nFr~Ql 103 (126)
=.++|+ |..+-.||-+|+++=
T Consensus 35 Isk~~lkd~et~~~I~~Fiek~ 56 (107)
T d1ej5a_ 35 ISEAQLTDAETSKLIYDFIEDQ 56 (107)
T ss_dssp CCHHHHSCHHHHHHHHHHHHHT
T ss_pred CCHHHhcCHHHHHHHHHHHHHc
Confidence 345677 788889999999753
No 9
>d3dbya1 a.29.13.1 (A:5-125) Uncharacterized protein BCE_G9241_0798 {Bacillus cereus [TaxId: 1396]}
Probab=15.55 E-value=46 Score=21.98 Aligned_cols=27 Identities=15% Similarity=0.192 Sum_probs=20.7
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhHhhh
Q 044736 82 DDDNDNIDRNSEVFITNFRRRLLYERQ 108 (126)
Q Consensus 82 ~~~~~dId~~Ae~FI~nFr~Ql~lqRq 108 (126)
|+.|.+.=++|+.|+..|-+-+.--++
T Consensus 29 ~p~e~~li~~A~~F~~~Fd~Ll~~a~~ 55 (121)
T d3dbya1 29 APKEKEDIKKATYFVETFTNLLNKVRN 55 (121)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 567778888999999999886644443
No 10
>d3dbya2 a.29.13.1 (A:126-260) Uncharacterized protein BCE_G9241_0798 {Bacillus cereus [TaxId: 1396]}
Probab=14.98 E-value=68 Score=21.35 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=19.1
Q ss_pred CCCCchhhhhHHHHHHHHHHHHh
Q 044736 82 DDDNDNIDRNSEVFITNFRRRLL 104 (126)
Q Consensus 82 ~~~~~dId~~Ae~FI~nFr~Ql~ 104 (126)
|+.|.+.=++|+.|++.|-+-+.
T Consensus 27 dp~E~~li~~A~~F~~~Fe~Ll~ 49 (135)
T d3dbya2 27 DLVEKRLKEKSEEFTKHFEQFYL 49 (135)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHH
Confidence 57788888999999999987543
Done!