Query 044737
Match_columns 399
No_of_seqs 481 out of 4078
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 10:41:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044737.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044737hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 6.3E-20 2.1E-24 153.7 17.3 105 115-219 10-115 (126)
2 3rkv_A Putative peptidylprolyl 99.8 1.2E-18 4.1E-23 150.7 15.6 109 111-219 4-131 (162)
3 4gcn_A Protein STI-1; structur 99.8 2E-18 6.7E-23 144.5 15.6 112 113-224 3-122 (127)
4 2hr2_A Hypothetical protein; a 99.8 1.2E-18 4E-23 152.1 13.1 104 115-218 8-135 (159)
5 3upv_A Heat shock protein STI1 99.8 4.1E-17 1.4E-21 134.6 16.8 103 116-218 2-111 (126)
6 3gyz_A Chaperone protein IPGC; 99.7 3.7E-17 1.3E-21 141.7 17.1 107 113-219 31-138 (151)
7 3sz7_A HSC70 cochaperone (SGT) 99.7 1.2E-16 4E-21 138.4 15.4 105 115-219 8-113 (164)
8 2xcb_A PCRH, regulatory protei 99.7 5.7E-16 2E-20 131.2 15.7 105 115-219 15-120 (142)
9 1p5q_A FKBP52, FK506-binding p 99.7 1.8E-15 6.1E-20 147.4 20.5 124 111-234 140-280 (336)
10 2vgx_A Chaperone SYCD; alterna 99.7 7.7E-16 2.6E-20 132.2 15.7 105 115-219 18-123 (148)
11 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 1.3E-15 4.3E-20 154.8 18.7 122 112-233 262-400 (457)
12 4ga2_A E3 SUMO-protein ligase 99.7 1.2E-15 4E-20 131.1 14.9 105 115-219 28-134 (150)
13 3q49_B STIP1 homology and U bo 99.7 2.5E-15 8.6E-20 124.7 15.7 101 117-217 8-109 (137)
14 2fbn_A 70 kDa peptidylprolyl i 99.7 3.3E-15 1.1E-19 133.1 17.6 118 111-228 31-166 (198)
15 1ihg_A Cyclophilin 40; ppiase 99.6 3.8E-15 1.3E-19 147.4 17.5 117 111-227 216-350 (370)
16 1a17_A Serine/threonine protei 99.6 4.2E-14 1.4E-18 120.4 21.2 109 111-219 6-115 (166)
17 2lnm_A Protein TIC 40, chlorop 99.6 2E-16 6.8E-21 116.0 5.4 57 342-398 4-60 (62)
18 2h6f_A Protein farnesyltransfe 99.6 3.8E-15 1.3E-19 148.2 16.4 133 114-246 93-228 (382)
19 4gyw_A UDP-N-acetylglucosamine 99.6 7.9E-15 2.7E-19 157.2 19.1 132 115-246 6-139 (723)
20 2pl2_A Hypothetical conserved 99.6 7.5E-15 2.6E-19 133.5 15.0 128 118-245 5-145 (217)
21 3urz_A Uncharacterized protein 99.6 7.1E-14 2.4E-18 126.1 21.0 110 118-227 4-131 (208)
22 1hxi_A PEX5, peroxisome target 99.6 6.7E-15 2.3E-19 121.9 12.8 100 120-219 19-119 (121)
23 2if4_A ATFKBP42; FKBP-like, al 99.6 1.9E-15 6.4E-20 147.5 11.0 116 111-226 172-306 (338)
24 1elw_A TPR1-domain of HOP; HOP 99.6 4.1E-14 1.4E-18 112.8 16.6 104 116-219 2-106 (118)
25 3vtx_A MAMA; tetratricopeptide 99.6 2E-13 6.9E-18 119.2 20.7 130 117-246 4-135 (184)
26 2y4t_A DNAJ homolog subfamily 99.6 8.7E-14 3E-18 137.8 20.5 162 119-280 258-450 (450)
27 1elr_A TPR2A-domain of HOP; HO 99.6 5.2E-14 1.8E-18 114.3 15.7 113 116-228 2-122 (131)
28 2vyi_A SGTA protein; chaperone 99.6 1.1E-13 3.6E-18 112.3 17.4 108 112-219 6-114 (131)
29 2lni_A Stress-induced-phosphop 99.6 6E-14 2E-18 114.7 15.0 110 117-226 15-126 (133)
30 4gyw_A UDP-N-acetylglucosamine 99.6 3E-14 1E-18 152.7 17.0 129 118-246 43-173 (723)
31 2pl2_A Hypothetical conserved 99.6 8.6E-14 2.9E-18 126.4 17.6 128 118-246 39-179 (217)
32 2dba_A Smooth muscle cell asso 99.6 6.3E-14 2.2E-18 116.9 15.1 103 117-219 27-133 (148)
33 4ga2_A E3 SUMO-protein ligase 99.6 3.6E-15 1.2E-19 128.0 6.6 112 124-235 3-116 (150)
34 4i17_A Hypothetical protein; T 99.6 1.5E-13 5.1E-18 124.5 17.6 101 119-219 8-110 (228)
35 3urz_A Uncharacterized protein 99.5 1.8E-13 6.2E-18 123.4 17.5 78 122-199 58-136 (208)
36 2xev_A YBGF; tetratricopeptide 99.5 1.2E-13 4E-18 113.3 14.4 100 120-219 4-110 (129)
37 4i17_A Hypothetical protein; T 99.5 4.4E-13 1.5E-17 121.3 18.4 110 119-228 43-163 (228)
38 2h6f_A Protein farnesyltransfe 99.5 6.5E-14 2.2E-18 139.3 13.5 113 118-230 131-246 (382)
39 1zu2_A Mitochondrial import re 99.5 3.3E-14 1.1E-18 123.7 9.9 90 130-219 14-125 (158)
40 2c2l_A CHIP, carboxy terminus 99.5 1.1E-13 3.7E-18 131.2 13.2 101 118-218 4-105 (281)
41 3vtx_A MAMA; tetratricopeptide 99.5 1.8E-12 6.2E-17 113.1 18.8 127 118-244 39-167 (184)
42 1na0_A Designed protein CTPR3; 99.5 2.5E-12 8.6E-17 103.1 17.7 102 118-219 9-111 (125)
43 2kck_A TPR repeat; tetratricop 99.5 4.3E-13 1.5E-17 106.0 12.2 99 120-218 8-110 (112)
44 3gyz_A Chaperone protein IPGC; 99.5 1.3E-13 4.3E-18 119.4 9.8 109 138-246 22-132 (151)
45 2llw_A Heat shock protein STI1 99.5 1.7E-14 6E-19 107.8 3.6 53 342-394 12-64 (71)
46 1xnf_A Lipoprotein NLPI; TPR, 99.5 3.9E-12 1.3E-16 116.9 19.9 105 116-220 41-146 (275)
47 1hh8_A P67PHOX, NCF-2, neutrop 99.4 2.8E-12 9.6E-17 114.2 16.5 128 116-245 4-148 (213)
48 2e2e_A Formate-dependent nitri 99.4 2.8E-12 9.6E-17 111.5 16.2 102 118-219 44-149 (177)
49 3k9i_A BH0479 protein; putativ 99.4 1.6E-13 5.5E-18 112.0 7.6 90 130-219 2-95 (117)
50 4gco_A Protein STI-1; structur 99.4 7.3E-13 2.5E-17 110.4 11.7 104 143-246 4-109 (126)
51 1wao_1 Serine/threonine protei 99.4 1.4E-13 4.8E-18 140.6 8.5 112 116-227 4-117 (477)
52 2fo7_A Synthetic consensus TPR 99.4 6.6E-12 2.3E-16 101.5 16.9 109 119-227 2-112 (136)
53 3as5_A MAMA; tetratricopeptide 99.4 1.2E-11 4E-16 106.0 18.6 119 118-236 42-162 (186)
54 3uq3_A Heat shock protein STI1 99.4 5.2E-12 1.8E-16 114.6 16.6 100 116-215 137-237 (258)
55 2l6j_A TPR repeat-containing p 99.4 2.3E-13 7.9E-18 108.3 6.6 94 117-210 3-103 (111)
56 3uq3_A Heat shock protein STI1 99.4 1.3E-11 4.3E-16 112.0 19.0 130 117-246 78-235 (258)
57 1hh8_A P67PHOX, NCF-2, neutrop 99.4 3.6E-12 1.2E-16 113.5 15.0 101 118-218 37-154 (213)
58 3qky_A Outer membrane assembly 99.4 3.4E-12 1.2E-16 118.2 15.2 101 118-218 15-130 (261)
59 3as5_A MAMA; tetratricopeptide 99.4 2.3E-11 7.9E-16 104.2 18.7 130 116-245 6-137 (186)
60 3qky_A Outer membrane assembly 99.4 1.8E-11 6E-16 113.3 19.0 129 118-246 52-223 (261)
61 4abn_A Tetratricopeptide repea 99.4 4.4E-12 1.5E-16 129.1 15.9 127 118-245 102-248 (474)
62 3ieg_A DNAJ homolog subfamily 99.4 1.6E-11 5.3E-16 116.6 18.5 102 117-218 2-107 (359)
63 2kat_A Uncharacterized protein 99.4 4.4E-12 1.5E-16 102.6 12.5 83 136-218 3-86 (115)
64 2vgx_A Chaperone SYCD; alterna 99.4 1.3E-12 4.6E-17 111.8 9.9 110 137-246 6-117 (148)
65 2pzi_A Probable serine/threoni 99.4 1.2E-12 4.2E-17 139.2 11.8 125 118-243 433-559 (681)
66 2vq2_A PILW, putative fimbrial 99.4 2.6E-11 8.9E-16 107.6 18.5 130 116-245 6-140 (225)
67 4abn_A Tetratricopeptide repea 99.4 2.5E-12 8.6E-17 130.9 13.4 123 119-241 171-315 (474)
68 2vsy_A XCC0866; transferase, g 99.4 9.7E-12 3.3E-16 128.7 18.0 129 117-245 22-155 (568)
69 4eqf_A PEX5-related protein; a 99.4 6.5E-12 2.2E-16 121.3 15.3 99 119-217 214-313 (365)
70 2xcb_A PCRH, regulatory protei 99.4 3.8E-12 1.3E-16 107.4 11.9 108 139-246 5-114 (142)
71 2q7f_A YRRB protein; TPR, prot 99.4 3.3E-11 1.1E-15 108.6 18.4 126 118-243 57-184 (243)
72 2q7f_A YRRB protein; TPR, prot 99.4 2.2E-11 7.5E-16 109.8 16.8 127 118-244 91-219 (243)
73 2ho1_A Type 4 fimbrial biogene 99.4 6.1E-11 2.1E-15 107.9 19.9 127 118-244 71-201 (252)
74 2yhc_A BAMD, UPF0169 lipoprote 99.4 3.8E-11 1.3E-15 109.2 18.4 102 118-219 4-130 (225)
75 1fch_A Peroxisomal targeting s 99.3 1E-11 3.4E-16 119.4 14.9 101 118-218 217-318 (368)
76 4eqf_A PEX5-related protein; a 99.3 8.4E-12 2.9E-16 120.5 14.3 101 119-219 66-167 (365)
77 2y4t_A DNAJ homolog subfamily 99.3 3.8E-11 1.3E-15 118.7 19.3 111 109-219 17-128 (450)
78 2ho1_A Type 4 fimbrial biogene 99.3 2.7E-11 9.1E-16 110.4 16.7 129 117-245 36-168 (252)
79 2e2e_A Formate-dependent nitri 99.3 3E-12 1E-16 111.3 9.9 120 127-246 19-143 (177)
80 1w3b_A UDP-N-acetylglucosamine 99.3 1.6E-11 5.5E-16 119.7 16.0 126 118-243 67-194 (388)
81 2r5s_A Uncharacterized protein 99.3 7.9E-12 2.7E-16 109.2 12.0 121 120-240 8-166 (176)
82 2gw1_A Mitochondrial precursor 99.3 1.4E-11 4.8E-16 123.4 15.2 105 114-218 2-106 (514)
83 3ieg_A DNAJ homolog subfamily 99.3 6.8E-11 2.3E-15 112.1 18.9 110 119-228 235-350 (359)
84 1w3b_A UDP-N-acetylglucosamine 99.3 3.7E-11 1.3E-15 117.1 17.5 99 120-218 137-236 (388)
85 2vq2_A PILW, putative fimbrial 99.3 6.8E-11 2.3E-15 104.8 17.8 126 118-243 42-172 (225)
86 3qou_A Protein YBBN; thioredox 99.3 3E-11 1E-15 114.6 16.3 116 118-233 117-270 (287)
87 2pzi_A Probable serine/threoni 99.3 6.5E-12 2.2E-16 133.6 12.8 109 118-227 467-577 (681)
88 3u4t_A TPR repeat-containing p 99.3 1E-11 3.6E-16 114.2 12.0 121 120-241 5-131 (272)
89 3cv0_A Peroxisome targeting si 99.3 6.1E-11 2.1E-15 111.3 16.7 100 118-217 172-272 (327)
90 2fo7_A Synthetic consensus TPR 99.3 6.1E-11 2.1E-15 95.7 14.4 99 119-217 36-135 (136)
91 2yhc_A BAMD, UPF0169 lipoprote 99.3 4.1E-11 1.4E-15 108.9 14.7 102 118-219 41-181 (225)
92 3u4t_A TPR repeat-containing p 99.3 2.8E-11 9.6E-16 111.3 13.6 115 118-232 74-190 (272)
93 1fch_A Peroxisomal targeting s 99.3 6.1E-11 2.1E-15 113.8 16.3 101 119-219 65-166 (368)
94 3hym_B Cell division cycle pro 99.3 7.4E-11 2.5E-15 110.9 16.2 122 119-240 91-215 (330)
95 2llv_A Heat shock protein STI1 99.3 2.8E-13 9.6E-18 101.8 -0.6 52 342-393 15-67 (71)
96 3upv_A Heat shock protein STI1 99.3 1.1E-10 3.9E-15 95.5 15.0 97 150-246 3-100 (126)
97 3hym_B Cell division cycle pro 99.3 8.3E-11 2.8E-15 110.6 15.9 128 119-246 126-264 (330)
98 4gcn_A Protein STI-1; structur 99.3 4E-11 1.4E-15 99.7 11.7 69 150-218 7-75 (127)
99 3fp2_A TPR repeat-containing p 99.3 3.1E-11 1E-15 122.0 13.0 106 112-218 19-125 (537)
100 1qqe_A Vesicular transport pro 99.2 6.6E-11 2.3E-15 112.1 14.2 103 116-218 75-191 (292)
101 3mkr_A Coatomer subunit epsilo 99.2 1.7E-10 5.7E-15 109.8 16.7 128 118-245 130-262 (291)
102 3edt_B KLC 2, kinesin light ch 99.2 1.3E-10 4.3E-15 106.4 15.1 127 115-241 40-192 (283)
103 3sz7_A HSC70 cochaperone (SGT) 99.2 6E-11 2E-15 102.1 12.0 97 150-246 10-107 (164)
104 1na3_A Designed protein CTPR2; 99.2 1.8E-10 6E-15 88.0 13.1 83 117-199 8-91 (91)
105 2hr2_A Hypothetical protein; a 99.2 8.5E-11 2.9E-15 102.3 12.4 96 151-246 11-130 (159)
106 3cv0_A Peroxisome targeting si 99.2 1.7E-10 5.9E-15 108.2 15.5 100 119-218 22-122 (327)
107 2kc7_A BFR218_protein; tetratr 99.2 1.9E-11 6.5E-16 95.8 7.3 89 122-218 4-94 (99)
108 3fp2_A TPR repeat-containing p 99.2 3.9E-10 1.3E-14 113.9 18.8 128 119-246 277-406 (537)
109 1xnf_A Lipoprotein NLPI; TPR, 99.2 3.1E-10 1.1E-14 104.1 16.3 117 130-246 17-139 (275)
110 2vsy_A XCC0866; transferase, g 99.2 2E-10 6.8E-15 118.8 16.5 116 131-246 2-119 (568)
111 3q49_B STIP1 homology and U bo 99.2 4.8E-10 1.6E-14 92.4 15.7 101 146-246 3-105 (137)
112 3ma5_A Tetratricopeptide repea 99.2 5.8E-11 2E-15 94.3 9.7 72 147-218 2-74 (100)
113 1qqe_A Vesicular transport pro 99.2 1.6E-10 5.6E-15 109.4 13.6 129 117-245 36-185 (292)
114 1p5q_A FKBP52, FK506-binding p 99.2 2.1E-10 7.3E-15 111.4 14.5 97 116-212 194-292 (336)
115 3mkr_A Coatomer subunit epsilo 99.2 6.1E-10 2.1E-14 105.9 16.5 90 130-219 178-269 (291)
116 2xpi_A Anaphase-promoting comp 99.2 1.7E-09 5.7E-14 111.0 20.6 129 118-246 373-503 (597)
117 1hxi_A PEX5, peroxisome target 99.2 5.6E-10 1.9E-14 91.9 13.9 90 152-241 18-108 (121)
118 1a17_A Serine/threonine protei 99.1 5.5E-10 1.9E-14 94.5 13.6 97 118-214 47-146 (166)
119 3edt_B KLC 2, kinesin light ch 99.1 4.5E-10 1.5E-14 102.7 13.8 102 115-216 82-200 (283)
120 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 3E-11 1E-15 122.5 6.3 116 131-246 247-379 (457)
121 2xpi_A Anaphase-promoting comp 99.1 3.2E-09 1.1E-13 108.9 21.1 129 118-246 407-544 (597)
122 4a1s_A PINS, partner of inscut 99.1 1.5E-09 5E-14 106.1 16.3 119 115-233 45-181 (411)
123 4g1t_A Interferon-induced prot 99.1 6.8E-10 2.3E-14 110.7 13.9 102 118-219 51-172 (472)
124 3nf1_A KLC 1, kinesin light ch 99.1 6.7E-10 2.3E-14 103.4 13.0 132 114-245 23-180 (311)
125 2ond_A Cleavage stimulation fa 99.1 3.4E-09 1.2E-13 100.8 17.8 128 119-246 100-231 (308)
126 3ro3_A PINS homolog, G-protein 99.1 1.8E-09 6.3E-14 89.8 13.7 102 115-216 6-120 (164)
127 3rkv_A Putative peptidylprolyl 99.1 5.1E-10 1.7E-14 95.9 10.5 97 150-246 10-125 (162)
128 3nf1_A KLC 1, kinesin light ch 99.1 1.8E-09 6.3E-14 100.4 14.4 130 115-244 66-221 (311)
129 2l6j_A TPR repeat-containing p 99.1 1.6E-09 5.6E-14 85.6 11.9 68 151-218 4-71 (111)
130 1dce_A Protein (RAB geranylger 99.1 2.6E-09 9E-14 111.3 16.8 117 115-231 60-191 (567)
131 2ond_A Cleavage stimulation fa 99.1 7.5E-09 2.6E-13 98.4 18.5 84 135-218 81-167 (308)
132 2gw1_A Mitochondrial precursor 99.1 9.5E-10 3.2E-14 110.0 12.7 129 118-246 304-443 (514)
133 1ouv_A Conserved hypothetical 99.0 9.7E-09 3.3E-13 95.1 18.1 123 117-244 5-140 (273)
134 1na3_A Designed protein CTPR2; 99.0 2.5E-09 8.6E-14 81.5 11.7 70 150-219 8-77 (91)
135 2ifu_A Gamma-SNAP; membrane fu 99.0 8E-10 2.7E-14 105.4 10.7 100 117-217 75-187 (307)
136 2kck_A TPR repeat; tetratricop 99.0 5.5E-10 1.9E-14 87.7 8.0 93 147-239 1-98 (112)
137 1dce_A Protein (RAB geranylger 99.0 5.6E-09 1.9E-13 108.8 17.9 121 112-232 22-157 (567)
138 3ro2_A PINS homolog, G-protein 99.0 4.1E-09 1.4E-13 98.3 15.3 101 117-217 4-115 (338)
139 3ulq_A Response regulator aspa 99.0 2.8E-09 9.7E-14 104.0 14.8 130 115-244 140-290 (383)
140 2qfc_A PLCR protein; TPR, HTH, 99.0 9.4E-09 3.2E-13 96.9 17.7 122 116-237 113-255 (293)
141 2fbn_A 70 kDa peptidylprolyl i 99.0 6.2E-10 2.1E-14 98.7 8.9 121 126-246 12-150 (198)
142 3n71_A Histone lysine methyltr 99.0 4.4E-09 1.5E-13 107.7 16.3 102 113-214 304-422 (490)
143 3sf4_A G-protein-signaling mod 99.0 4.5E-09 1.5E-13 101.6 15.4 116 118-233 9-142 (406)
144 2vyi_A SGTA protein; chaperone 99.0 3.3E-09 1.1E-13 85.3 12.1 84 118-201 46-130 (131)
145 2if4_A ATFKBP42; FKBP-like, al 99.0 3E-10 1E-14 110.5 6.8 100 120-219 232-333 (338)
146 3k9i_A BH0479 protein; putativ 99.0 3.4E-09 1.1E-13 86.0 11.5 85 115-199 24-109 (117)
147 1wao_1 Serine/threonine protei 99.0 4.5E-10 1.5E-14 114.5 7.4 101 118-218 40-154 (477)
148 3gw4_A Uncharacterized protein 99.0 5.6E-09 1.9E-13 91.4 13.2 100 117-216 25-138 (203)
149 2ifu_A Gamma-SNAP; membrane fu 99.0 2.9E-09 9.9E-14 101.5 11.9 101 116-218 114-227 (307)
150 3dra_A Protein farnesyltransfe 99.0 1.2E-08 4E-13 98.3 16.0 100 119-218 68-179 (306)
151 3ulq_A Response regulator aspa 99.0 2E-09 6.9E-14 105.0 10.7 126 120-245 105-251 (383)
152 3u3w_A Transcriptional activat 99.0 2.2E-09 7.6E-14 101.3 10.2 99 117-215 154-267 (293)
153 3q15_A PSP28, response regulat 98.9 1.2E-08 4.3E-13 99.4 15.8 101 116-216 180-292 (378)
154 2lni_A Stress-induced-phosphop 98.9 7.6E-09 2.6E-13 83.8 11.9 96 150-245 15-111 (133)
155 2r5s_A Uncharacterized protein 98.9 1.1E-08 3.7E-13 89.0 13.2 79 135-213 91-172 (176)
156 3sf4_A G-protein-signaling mod 98.9 7.3E-09 2.5E-13 100.1 13.3 130 116-245 185-334 (406)
157 1ihg_A Cyclophilin 40; ppiase 98.9 5.5E-09 1.9E-13 103.0 12.5 91 117-207 272-363 (370)
158 1ouv_A Conserved hypothetical 98.9 5E-08 1.7E-12 90.2 18.1 121 119-243 39-175 (273)
159 3dss_A Geranylgeranyl transfer 98.9 2.8E-08 9.6E-13 96.6 16.9 114 115-228 105-237 (331)
160 1elw_A TPR1-domain of HOP; HOP 98.9 1.8E-08 6E-13 79.5 12.8 93 151-243 4-97 (118)
161 4a1s_A PINS, partner of inscut 98.9 5.1E-09 1.7E-13 102.2 11.6 127 117-243 222-368 (411)
162 3ro3_A PINS homolog, G-protein 98.9 1.2E-08 4.3E-13 84.6 12.1 100 117-216 48-160 (164)
163 3ro2_A PINS homolog, G-protein 98.9 8.8E-09 3E-13 96.0 12.2 103 116-218 181-296 (338)
164 2kc7_A BFR218_protein; tetratr 98.9 7.1E-09 2.4E-13 80.9 9.6 66 154-219 3-69 (99)
165 3u3w_A Transcriptional activat 98.9 2E-08 6.8E-13 94.7 14.3 100 118-217 115-228 (293)
166 3dss_A Geranylgeranyl transfer 98.9 6.2E-08 2.1E-12 94.1 18.0 114 118-231 64-192 (331)
167 4g1t_A Interferon-induced prot 98.9 1.4E-08 4.8E-13 101.1 13.9 102 118-219 247-368 (472)
168 2dba_A Smooth muscle cell asso 98.9 2.2E-08 7.4E-13 82.8 12.8 99 147-245 23-126 (148)
169 3q15_A PSP28, response regulat 98.9 1.7E-08 5.9E-13 98.4 13.9 99 115-213 138-250 (378)
170 3dra_A Protein farnesyltransfe 98.9 2.3E-08 7.8E-13 96.3 14.2 115 118-232 103-234 (306)
171 2c2l_A CHIP, carboxy terminus 98.9 1.8E-08 6.3E-13 94.9 13.3 95 150-244 3-98 (281)
172 1na0_A Designed protein CTPR3; 98.9 4.6E-08 1.6E-12 77.7 13.6 97 147-243 3-102 (125)
173 2qfc_A PLCR protein; TPR, HTH, 98.9 1.3E-07 4.5E-12 88.9 18.5 104 115-218 72-191 (293)
174 3ma5_A Tetratricopeptide repea 98.8 9E-09 3.1E-13 81.4 8.8 67 117-183 6-73 (100)
175 3q7a_A Farnesyltransferase alp 98.8 8.4E-08 2.9E-12 93.8 17.2 106 129-234 65-175 (349)
176 1zu2_A Mitochondrial import re 98.8 7E-09 2.4E-13 90.0 8.4 70 116-185 34-125 (158)
177 4f3v_A ESX-1 secretion system 98.8 2.5E-08 8.6E-13 94.7 12.5 98 120-217 137-240 (282)
178 2xev_A YBGF; tetratricopeptide 98.8 5E-08 1.7E-12 79.1 12.7 95 152-246 3-104 (129)
179 1pc2_A Mitochondria fission pr 98.8 3.8E-08 1.3E-12 84.6 11.7 87 134-220 14-106 (152)
180 3gw4_A Uncharacterized protein 98.8 3.4E-08 1.2E-12 86.3 11.6 101 116-216 64-178 (203)
181 3qou_A Protein YBBN; thioredox 98.8 2.2E-08 7.5E-13 94.7 11.0 85 129-213 196-283 (287)
182 1elr_A TPR2A-domain of HOP; HO 98.8 5E-08 1.7E-12 78.4 11.6 97 150-246 3-107 (131)
183 3q7a_A Farnesyltransferase alp 98.8 6.3E-08 2.2E-12 94.7 13.6 114 118-231 88-214 (349)
184 3rjv_A Putative SEL1 repeat pr 98.8 1.2E-07 4.1E-12 85.4 14.1 97 117-217 17-121 (212)
185 2kat_A Uncharacterized protein 98.7 6.9E-08 2.4E-12 77.5 10.4 78 118-195 19-99 (115)
186 3qww_A SET and MYND domain-con 98.7 5.5E-08 1.9E-12 98.0 11.8 99 117-215 297-412 (433)
187 3ly7_A Transcriptional activat 98.7 2.4E-07 8.2E-12 90.8 15.5 109 118-227 196-352 (372)
188 2v5f_A Prolyl 4-hydroxylase su 98.7 2.1E-07 7E-12 74.5 11.8 75 118-192 5-87 (104)
189 3bee_A Putative YFRE protein; 98.7 1.7E-07 5.7E-12 73.9 11.1 71 148-218 2-76 (93)
190 3rjv_A Putative SEL1 repeat pr 98.7 1.4E-07 4.8E-12 84.9 12.0 108 118-228 50-172 (212)
191 2ooe_A Cleavage stimulation fa 98.7 1.7E-07 6E-12 95.7 14.1 126 118-243 321-450 (530)
192 3qwp_A SET and MYND domain-con 98.7 2.2E-07 7.5E-12 93.5 14.2 100 115-214 284-400 (429)
193 4f3v_A ESX-1 secretion system 98.7 1.1E-07 3.7E-12 90.3 11.1 126 120-246 104-236 (282)
194 1hz4_A MALT regulatory protein 98.6 4.9E-07 1.7E-11 87.3 14.6 128 117-244 52-200 (373)
195 2ooe_A Cleavage stimulation fa 98.6 5.9E-07 2E-11 91.7 15.2 110 135-244 255-382 (530)
196 1hz4_A MALT regulatory protein 98.5 1.7E-06 5.9E-11 83.4 15.2 129 115-243 11-160 (373)
197 2v5f_A Prolyl 4-hydroxylase su 98.4 2.9E-06 9.9E-11 67.7 11.9 70 150-219 4-80 (104)
198 3n71_A Histone lysine methyltr 98.4 6.4E-07 2.2E-11 91.6 9.8 102 113-214 346-464 (490)
199 3u64_A Protein TP_0956; tetrat 98.4 2.3E-06 7.8E-11 81.0 12.1 85 134-218 179-273 (301)
200 1klx_A Cysteine rich protein B 98.3 7.3E-06 2.5E-10 68.7 13.1 92 124-218 31-130 (138)
201 2xm6_A Protein corresponding t 98.3 1.8E-05 6.3E-10 79.7 17.4 93 120-215 293-397 (490)
202 1nzn_A CGI-135 protein, fissio 98.3 4.9E-06 1.7E-10 69.0 10.7 95 132-226 15-115 (126)
203 3e4b_A ALGK; tetratricopeptide 98.3 7.2E-06 2.4E-10 82.5 13.6 104 120-227 178-292 (452)
204 2xm6_A Protein corresponding t 98.2 4.2E-05 1.4E-09 77.1 18.1 122 118-243 75-212 (490)
205 1klx_A Cysteine rich protein B 98.2 1.3E-05 4.6E-10 67.0 11.9 90 132-228 9-103 (138)
206 1pc2_A Mitochondria fission pr 98.2 7.8E-06 2.7E-10 70.2 9.8 71 119-189 33-109 (152)
207 3bee_A Putative YFRE protein; 98.1 1.6E-05 5.3E-10 62.5 9.4 67 118-184 6-76 (93)
208 3mv2_B Coatomer subunit epsilo 98.0 8.4E-05 2.9E-09 71.3 14.7 97 121-217 103-210 (310)
209 4b4t_Q 26S proteasome regulato 98.0 0.0001 3.4E-09 72.1 15.4 104 111-214 48-164 (434)
210 4b4t_Q 26S proteasome regulato 98.0 2.5E-05 8.6E-10 76.4 10.5 127 120-246 6-163 (434)
211 3e4b_A ALGK; tetratricopeptide 98.0 4E-05 1.4E-09 77.0 11.7 85 122-212 217-314 (452)
212 3mv2_B Coatomer subunit epsilo 97.9 6.8E-05 2.3E-09 71.9 11.9 94 121-219 179-287 (310)
213 1xi4_A Clathrin heavy chain; a 97.9 0.0001 3.6E-09 82.7 14.6 118 119-243 1196-1341(1630)
214 1xi4_A Clathrin heavy chain; a 97.8 7.2E-05 2.4E-09 84.0 12.0 90 124-218 1055-1167(1630)
215 3qwp_A SET and MYND domain-con 97.7 6.7E-05 2.3E-09 75.3 8.6 87 110-196 321-424 (429)
216 1b89_A Protein (clathrin heavy 97.7 4.8E-05 1.6E-09 76.4 6.9 73 120-204 124-196 (449)
217 3o48_A Mitochondria fission 1 97.7 0.00045 1.5E-08 57.5 11.1 77 150-226 39-119 (134)
218 3ffl_A Anaphase-promoting comp 97.6 0.00041 1.4E-08 60.1 11.1 93 119-211 21-148 (167)
219 1y8m_A FIS1; mitochondria, unk 97.6 0.0015 5.2E-08 55.0 14.2 76 150-225 38-117 (144)
220 3qww_A SET and MYND domain-con 97.6 0.00011 3.9E-09 73.7 8.5 69 112-180 334-411 (433)
221 1nzn_A CGI-135 protein, fissio 97.5 0.00041 1.4E-08 57.4 9.1 76 119-194 36-117 (126)
222 1b89_A Protein (clathrin heavy 97.5 0.0012 4E-08 66.3 13.4 117 117-241 147-266 (449)
223 3u64_A Protein TP_0956; tetrat 97.4 0.0027 9.1E-08 60.1 14.6 104 115-218 103-237 (301)
224 3ly7_A Transcriptional activat 97.3 0.0011 3.6E-08 65.0 11.0 72 119-191 278-349 (372)
225 3o48_A Mitochondria fission 1 97.3 0.0023 7.8E-08 53.3 11.2 76 119-194 41-121 (134)
226 2ff4_A Probable regulatory pro 97.3 0.0077 2.6E-07 59.3 17.1 112 115-226 112-253 (388)
227 1y8m_A FIS1; mitochondria, unk 97.3 0.0024 8.3E-08 53.8 11.1 74 119-192 40-118 (144)
228 4e6h_A MRNA 3'-END-processing 97.1 0.0071 2.4E-07 64.1 15.7 80 135-214 326-407 (679)
229 4e6h_A MRNA 3'-END-processing 97.1 0.0046 1.6E-07 65.5 14.2 120 120-239 436-562 (679)
230 4h7y_A Dual specificity protei 96.5 0.051 1.7E-06 46.2 13.0 98 120-218 15-127 (161)
231 2uy1_A Cleavage stimulation fa 96.3 0.22 7.5E-06 50.3 19.0 124 118-243 213-379 (493)
232 3ffl_A Anaphase-promoting comp 96.2 0.012 4.2E-07 50.8 7.7 79 116-195 61-165 (167)
233 1zbp_A Hypothetical protein VP 96.1 0.061 2.1E-06 50.0 12.1 63 125-187 4-67 (273)
234 4g26_A Pentatricopeptide repea 95.7 0.18 6E-06 51.2 15.1 111 134-244 86-201 (501)
235 4gns_B Protein CSD3, chitin bi 95.7 0.029 9.8E-07 59.9 9.2 79 134-212 301-398 (754)
236 4g26_A Pentatricopeptide repea 95.5 0.43 1.5E-05 48.3 16.9 107 120-226 107-218 (501)
237 2uy1_A Cleavage stimulation fa 95.4 0.27 9.1E-06 49.7 14.8 92 119-211 287-380 (493)
238 2lnm_A Protein TIC 40, chlorop 94.7 0.017 6E-07 41.4 2.7 46 342-397 13-62 (62)
239 4gns_B Protein CSD3, chitin bi 94.6 0.077 2.6E-06 56.6 8.5 59 119-177 338-397 (754)
240 1zbp_A Hypothetical protein VP 93.9 0.45 1.5E-05 44.2 11.1 61 159-219 5-65 (273)
241 4b4t_R RPN7, 26S proteasome re 93.8 0.16 5.6E-06 50.4 8.6 95 121-215 134-238 (429)
242 3txn_A 26S proteasome regulato 92.7 0.99 3.4E-05 44.3 12.1 91 123-213 104-209 (394)
243 3kae_A CDC27, possible protein 92.3 2 7E-05 37.2 11.8 92 123-218 38-147 (242)
244 1ya0_A SMG-7 transcript varian 92.2 0.71 2.4E-05 46.8 10.6 79 119-197 153-232 (497)
245 2llw_A Heat shock protein STI1 92.0 0.043 1.5E-06 40.5 0.9 14 343-356 22-35 (71)
246 2o37_A Protein SIS1; HSP40, J- 91.8 0.15 5E-06 39.4 3.9 24 256-279 46-69 (92)
247 2ff4_A Probable regulatory pro 91.4 0.92 3.1E-05 44.3 10.2 61 119-179 172-233 (388)
248 1ya0_A SMG-7 transcript varian 91.2 1.1 3.9E-05 45.3 10.9 66 152-217 153-218 (497)
249 2llv_A Heat shock protein STI1 89.1 0.071 2.4E-06 39.3 -0.1 19 346-364 9-28 (71)
250 2w2u_A Hypothetical P60 katani 87.8 2.5 8.4E-05 31.9 7.8 37 111-147 12-48 (83)
251 4b4t_P 26S proteasome regulato 87.7 8.5 0.00029 38.1 14.1 99 116-214 135-247 (445)
252 3mkq_A Coatomer beta'-subunit; 86.8 4.8 0.00016 41.9 12.3 28 150-177 680-707 (814)
253 2v6y_A AAA family ATPase, P60 85.6 4.2 0.00014 30.5 8.1 34 114-147 7-40 (83)
254 1qsa_A Protein (soluble lytic 85.0 3.1 0.0001 43.3 9.4 84 130-213 264-347 (618)
255 1wfd_A Hypothetical protein 15 84.9 6.3 0.00022 30.2 9.0 30 116-145 13-42 (93)
256 3spa_A Mtrpol, DNA-directed RN 84.9 15 0.0005 40.6 14.8 98 117-214 126-230 (1134)
257 3lz8_A Putative chaperone DNAJ 84.8 0.18 6.1E-06 48.4 0.0 28 253-280 65-92 (329)
258 3mkq_A Coatomer beta'-subunit; 84.7 13 0.00045 38.5 14.4 81 119-211 682-762 (814)
259 3mkq_B Coatomer subunit alpha; 84.5 4 0.00014 35.3 8.5 80 120-211 36-115 (177)
260 4fhn_B Nucleoporin NUP120; pro 83.7 3.2 0.00011 46.3 9.4 88 122-209 846-962 (1139)
261 4a5x_A MITD1, MIT domain-conta 83.6 8.2 0.00028 29.1 9.0 30 117-146 15-44 (86)
262 2cpt_A SKD1 protein, vacuolar 83.3 8.9 0.0003 30.7 9.6 33 114-146 14-46 (117)
263 4h7y_A Dual specificity protei 81.5 5.2 0.00018 33.9 7.7 68 118-186 61-129 (161)
264 2yua_A Williams-beuren syndrom 81.4 1.3 4.6E-05 34.3 3.9 28 254-281 56-83 (99)
265 3lpz_A GET4 (YOR164C homolog); 81.1 25 0.00084 33.5 13.3 95 115-209 32-160 (336)
266 2v6x_A Vacuolar protein sortin 80.6 12 0.00042 27.9 9.0 33 115-147 10-42 (85)
267 2crb_A Nuclear receptor bindin 79.9 18 0.00062 27.7 10.7 28 185-212 15-42 (97)
268 2ctr_A DNAJ homolog subfamily 78.6 0.92 3.2E-05 34.4 2.0 26 254-279 45-70 (88)
269 4a5x_A MITD1, MIT domain-conta 78.0 20 0.00067 27.0 10.0 14 206-219 44-57 (86)
270 2cpt_A SKD1 protein, vacuolar 77.6 25 0.00086 28.0 10.7 10 206-215 46-55 (117)
271 4b4t_R RPN7, 26S proteasome re 77.0 1.3 4.5E-05 43.7 3.2 66 150-215 130-198 (429)
272 3mkq_B Coatomer subunit alpha; 75.4 6.4 0.00022 34.1 6.7 46 127-176 14-59 (177)
273 1bq0_A DNAJ, HSP40; chaperone, 74.9 0.83 2.8E-05 35.8 0.8 28 254-281 42-69 (103)
274 4b4t_S RPN3, 26S proteasome re 74.8 5.7 0.00019 40.3 7.1 69 150-218 230-303 (523)
275 2f4m_B UV excision repair prot 74.2 3.3 0.00011 29.3 3.7 35 355-389 7-46 (61)
276 3ax2_A Mitochondrial import re 73.5 13 0.00044 27.2 6.9 31 119-149 18-48 (73)
277 3mkr_B Coatomer subunit alpha; 73.4 62 0.0021 30.5 14.2 30 120-149 104-133 (320)
278 3mv2_A Coatomer subunit alpha; 72.9 37 0.0013 32.1 11.8 104 115-218 111-240 (325)
279 3kae_A CDC27, possible protein 72.4 48 0.0016 28.7 13.4 67 118-184 62-147 (242)
280 2dmx_A DNAJ homolog subfamily 71.5 4.1 0.00014 30.9 4.1 27 254-280 49-75 (92)
281 2wpv_A GET4, UPF0363 protein Y 71.1 46 0.0016 31.3 12.1 92 118-209 33-158 (312)
282 2och_A Hypothetical protein DN 69.7 3.1 0.00011 30.1 2.9 25 256-280 46-70 (73)
283 2crb_A Nuclear receptor bindin 69.6 10 0.00034 29.1 5.7 31 115-145 12-42 (97)
284 2cug_A Mkiaa0962 protein; DNAJ 69.3 4.3 0.00015 30.6 3.7 26 254-279 55-80 (88)
285 2w2u_A Hypothetical P60 katani 69.2 33 0.0011 25.5 8.8 12 207-218 48-59 (83)
286 1wy6_A Hypothetical protein ST 68.6 21 0.00073 29.8 7.9 40 178-217 118-157 (172)
287 1gh6_A Large T antigen; tumor 68.5 3.2 0.00011 33.2 3.0 24 256-279 47-70 (114)
288 2ijq_A Hypothetical protein; s 68.2 29 0.00098 29.4 9.0 61 119-179 33-103 (161)
289 3txn_A 26S proteasome regulato 68.2 36 0.0012 33.1 11.1 96 119-214 20-168 (394)
290 2dn9_A DNAJ homolog subfamily 67.7 5 0.00017 29.4 3.7 27 254-280 46-72 (79)
291 1faf_A Large T antigen; J doma 66.8 17 0.00057 26.7 6.5 23 256-278 50-72 (79)
292 2ctp_A DNAJ homolog subfamily 66.3 4.5 0.00015 29.6 3.2 27 254-280 45-71 (78)
293 2ctq_A DNAJ homolog subfamily 66.0 4.2 0.00014 32.2 3.2 26 254-279 59-84 (112)
294 2v6y_A AAA family ATPase, P60 65.7 34 0.0012 25.3 8.1 13 206-218 39-51 (83)
295 2vkj_A TM1634; membrane protei 64.4 27 0.00094 26.5 7.1 34 116-149 51-84 (106)
296 4abx_A DNA repair protein RECN 64.1 18 0.00063 30.8 7.2 70 168-242 73-142 (175)
297 1wy6_A Hypothetical protein ST 63.8 28 0.00095 29.1 7.7 60 121-180 93-154 (172)
298 1pve_A HHR23B, UV excision rep 63.1 2.2 7.6E-05 31.2 0.9 29 355-383 22-52 (72)
299 2cfu_A SDSA1; SDS-hydrolase, l 63.0 12 0.00041 39.0 6.9 48 118-165 449-497 (658)
300 1wfd_A Hypothetical protein 15 62.4 48 0.0017 25.1 10.9 17 203-219 40-56 (93)
301 2ys8_A RAB-related GTP-binding 61.9 6.9 0.00024 29.6 3.6 23 254-276 65-87 (90)
302 1om2_A Protein (mitochondrial 61.3 14 0.00047 28.5 5.1 32 118-149 20-51 (95)
303 2lgw_A DNAJ homolog subfamily 60.9 5.5 0.00019 30.8 2.9 27 253-279 41-67 (99)
304 1hdj_A Human HSP40, HDJ-1; mol 60.3 3.9 0.00013 29.9 1.8 27 254-280 41-67 (77)
305 2ctw_A DNAJ homolog subfamily 59.6 6.3 0.00022 31.0 3.1 26 254-279 56-81 (109)
306 2qsa_A DNAJ homolog DNJ-2; J-d 59.1 20 0.00069 27.9 6.0 28 252-279 56-83 (109)
307 2pf4_E Small T antigen; PP2A, 58.6 6.6 0.00022 33.9 3.2 25 256-280 50-74 (174)
308 1qsa_A Protein (soluble lytic 58.0 58 0.002 33.6 10.9 121 123-244 219-345 (618)
309 2dl1_A Spartin; SPG20, MIT, st 54.8 31 0.0011 27.5 6.3 42 167-216 19-60 (116)
310 3t5v_B Nuclear mRNA export pro 51.7 23 0.0008 35.2 6.4 85 133-217 141-253 (455)
311 2ej7_A HCG3 gene; HCG3 protein 51.7 5.6 0.00019 29.3 1.5 28 253-280 48-75 (82)
312 2rkl_A Vacuolar protein sortin 51.2 33 0.0011 23.3 5.1 37 111-147 13-49 (53)
313 2qsf_X RAD23, UV excision repa 51.1 3.6 0.00012 35.4 0.3 36 354-389 27-68 (171)
314 2v6x_A Vacuolar protein sortin 50.0 74 0.0025 23.4 10.9 14 206-219 41-54 (85)
315 1pve_A HHR23B, UV excision rep 48.7 15 0.00053 26.7 3.4 36 344-382 20-61 (72)
316 4fhn_B Nucleoporin NUP120; pro 48.3 69 0.0023 35.5 10.2 88 125-216 819-930 (1139)
317 4b4t_S RPN3, 26S proteasome re 47.8 26 0.00089 35.5 6.1 65 118-184 231-303 (523)
318 2cwy_A Hypothetical protein TT 46.6 73 0.0025 24.2 7.2 56 122-179 5-67 (94)
319 4b4t_P 26S proteasome regulato 46.6 78 0.0027 31.0 9.4 62 151-212 137-204 (445)
320 3apq_A DNAJ homolog subfamily 46.1 13 0.00044 32.2 3.2 27 254-280 41-67 (210)
321 4gq2_M Nucleoporin NUP120; bet 45.8 48 0.0017 36.0 8.3 29 186-214 898-926 (950)
322 3bvo_A CO-chaperone protein HS 44.6 38 0.0013 29.8 6.0 27 252-278 87-113 (207)
323 4gq2_M Nucleoporin NUP120; bet 44.3 1.5E+02 0.0051 32.1 11.9 48 126-177 818-866 (950)
324 2l6l_A DNAJ homolog subfamily 44.1 20 0.00068 29.8 4.0 27 252-278 53-79 (155)
325 4e17_B Catenin alpha-1; four h 42.9 15 0.00053 23.4 2.2 16 361-382 24-39 (40)
326 3t5x_A PCI domain-containing p 42.1 60 0.002 28.3 6.9 52 116-167 12-69 (203)
327 2cfu_A SDSA1; SDS-hydrolase, l 41.9 41 0.0014 35.0 6.7 46 155-200 453-498 (658)
328 3spa_A Mtrpol, DNA-directed RN 41.9 3.5E+02 0.012 29.9 14.0 73 150-222 126-204 (1134)
329 1wjz_A 1700030A21RIK protein; 40.8 15 0.0005 27.7 2.4 28 253-280 60-87 (94)
330 3myv_A SUSD superfamily protei 40.2 61 0.0021 31.8 7.5 29 151-179 190-218 (454)
331 3myv_A SUSD superfamily protei 40.1 60 0.0021 31.8 7.4 47 167-213 164-218 (454)
332 2ijq_A Hypothetical protein; s 40.0 1.2E+02 0.0042 25.4 8.2 58 156-213 37-103 (161)
333 2dl1_A Spartin; SPG20, MIT, st 38.3 49 0.0017 26.3 5.1 14 170-183 48-61 (116)
334 3kez_A Putative sugar binding 37.6 66 0.0023 31.6 7.3 29 151-179 196-224 (461)
335 3kez_A Putative sugar binding 37.4 63 0.0022 31.7 7.1 47 167-213 170-224 (461)
336 3dza_A Uncharacterized putativ 36.7 75 0.0025 27.6 6.4 61 119-179 109-178 (191)
337 1fpo_A HSC20, chaperone protei 36.1 66 0.0022 27.2 6.0 27 253-279 46-72 (171)
338 2rpa_A Katanin P60 ATPase-cont 36.0 43 0.0015 24.7 4.1 27 120-146 14-40 (78)
339 3lew_A SUSD-like carbohydrate 36.0 75 0.0026 31.5 7.4 29 151-179 203-231 (495)
340 3g36_A Protein DPY-30 homolog; 36.0 29 0.00098 23.8 2.9 27 8-38 21-47 (55)
341 1iur_A KIAA0730 protein; DNAJ 35.9 77 0.0026 23.6 5.8 22 253-274 55-76 (88)
342 3lew_A SUSD-like carbohydrate 35.8 75 0.0026 31.6 7.4 48 167-214 174-232 (495)
343 3ax2_A Mitochondrial import re 35.7 90 0.0031 22.6 5.8 28 191-218 23-50 (73)
344 3t5x_A PCI domain-containing p 35.6 76 0.0026 27.5 6.6 37 150-186 13-49 (203)
345 1o3u_A Conserved hypothetical 35.4 1.1E+02 0.0038 24.4 7.1 35 113-147 11-45 (135)
346 2wb7_A PT26-6P; extra chromoso 35.3 64 0.0022 32.3 6.4 12 167-178 455-466 (526)
347 3mcx_A SUSD superfamily protei 35.1 68 0.0023 31.6 6.9 48 167-214 176-231 (477)
348 2ynq_A ESSB; membrane protein, 34.8 2E+02 0.007 24.1 14.7 88 120-218 10-103 (161)
349 2o8p_A 14-3-3 domain containin 34.8 1.7E+02 0.0058 26.0 8.7 62 118-179 120-196 (227)
350 3hho_A CO-chaperone protein HS 34.7 67 0.0023 27.3 5.9 26 253-278 49-74 (174)
351 4fm3_A Uncharacterized hypothe 34.6 1.6E+02 0.0053 22.7 8.1 59 114-179 30-88 (98)
352 3mcx_A SUSD superfamily protei 34.0 67 0.0023 31.7 6.6 47 135-181 177-232 (477)
353 3u84_A Menin; MLL, JUND, ledgf 33.6 3.6E+02 0.012 26.5 11.7 67 132-213 274-346 (550)
354 3re2_A Predicted protein; meni 33.0 3.4E+02 0.012 26.2 11.7 44 170-213 276-324 (472)
355 2yhe_A SEC-alkyl sulfatase; hy 38.5 9.5 0.00033 39.9 0.0 50 118-167 461-511 (668)
356 2izx_A CAMP-dependent protein 31.9 28 0.00097 21.9 2.3 28 7-38 9-37 (41)
357 2rpa_A Katanin P60 ATPase-cont 30.9 1.6E+02 0.0054 21.6 6.6 26 188-213 15-40 (78)
358 4aez_C MAD3, mitotic spindle c 30.2 2.9E+02 0.0099 24.4 11.3 49 169-217 132-182 (223)
359 4a1g_A Mitotic checkpoint seri 28.5 2.5E+02 0.0086 23.2 9.4 48 170-217 84-133 (152)
360 3qnk_A Putative lipoprotein; a 27.8 1.2E+02 0.004 30.3 7.2 30 185-214 182-211 (517)
361 3esl_A Checkpoint serine/threo 27.5 3.1E+02 0.01 23.9 12.9 66 150-216 79-146 (202)
362 3pmr_A Amyloid-like protein 1; 27.4 1.4E+02 0.0049 26.3 6.7 67 151-218 93-161 (219)
363 3qnk_A Putative lipoprotein; a 27.4 1.2E+02 0.0041 30.1 7.3 23 155-177 186-208 (517)
364 2ymb_A MITD1, MIT domain-conta 27.3 13 0.00045 34.0 0.0 33 115-147 20-52 (257)
365 3snx_A SUSD homolog, putative 27.1 94 0.0032 30.6 6.3 47 168-214 161-220 (460)
366 2kyg_A CAMP-dependent protein 26.8 38 0.0013 22.5 2.3 28 7-38 17-45 (50)
367 3umh_A Amyloid beta A4 protein 26.7 2E+02 0.0068 25.3 7.5 67 151-218 86-154 (211)
368 2izy_A CAMP-dependent protein 26.7 41 0.0014 22.9 2.4 28 7-38 12-40 (54)
369 1om2_A Protein (mitochondrial 26.5 1.1E+02 0.0036 23.5 5.0 28 191-218 26-53 (95)
370 4e18_B Catenin alpha-1; four h 25.5 43 0.0015 23.2 2.4 16 361-382 43-58 (59)
371 2wb7_A PT26-6P; extra chromoso 25.3 1.9E+02 0.0064 29.0 7.8 12 201-212 455-466 (526)
372 2br9_A 14-3-3E, 14-3-3 protein 24.2 1.2E+02 0.0042 27.0 5.9 14 164-177 186-199 (234)
373 2wvi_A Mitotic checkpoint seri 23.1 3.3E+02 0.011 22.8 12.9 47 170-216 79-127 (164)
374 2zan_A Vacuolar protein sortin 23.1 17 0.0006 35.7 0.0 35 113-147 6-40 (444)
375 3hdx_A SUSD homolog, SUSD supe 22.6 1.4E+02 0.0049 29.2 6.7 30 151-180 197-226 (478)
376 3hdx_A SUSD homolog, SUSD supe 22.6 1.4E+02 0.0048 29.3 6.6 48 167-214 156-226 (478)
377 3cx5_F Cytochrome B-C1 complex 22.5 16 0.00056 30.3 -0.3 12 28-39 7-18 (146)
378 2oo2_A Hypothetical protein AF 22.0 1.8E+02 0.0061 21.7 5.5 33 111-143 28-60 (86)
379 3l4h_A E3 ubiquitin-protein li 21.5 1.2E+02 0.0043 23.7 4.7 29 355-383 30-58 (109)
380 4b4t_O 26S proteasome regulato 21.4 4.9E+02 0.017 24.7 10.1 87 127-213 85-197 (393)
381 1oqy_A HHR23A, UV excision rep 21.2 34 0.0012 33.0 1.6 13 4-16 28-40 (368)
382 2pmr_A Uncharacterized protein 21.1 1.9E+02 0.0065 21.6 5.5 33 110-142 31-63 (87)
383 1o9d_A 14-3-3-like protein C; 21.1 1.5E+02 0.0052 26.9 5.9 43 136-178 153-205 (260)
384 4gq4_A Menin; tumor suppressor 20.5 6.1E+02 0.021 24.8 11.7 67 132-213 259-331 (489)
385 3jq1_A SUSD superfamily protei 20.3 1.2E+02 0.0042 29.9 5.6 26 187-212 182-207 (481)
386 3jq1_A SUSD superfamily protei 20.3 1.3E+02 0.0045 29.6 5.8 23 153-175 182-204 (481)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=6.3e-20 Score=153.71 Aligned_cols=105 Identities=26% Similarity=0.408 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
.+.++.++++|+.+++.|+|++|+.+|++||+++| ++.+|.++|.||+++++|++|+.+|++||+++|+++.+|+++|.
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 46788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|..+|+|++|+.+|+++++++|++.
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 99999999999999999999999984
No 2
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.80 E-value=1.2e-18 Score=150.69 Aligned_cols=109 Identities=18% Similarity=0.229 Sum_probs=102.1
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CC-CHHHHHHHHHHHHHcCCHHHHH
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML------------------NP-SAIMYATRASVYIKMKKPNAAI 171 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l------------------~P-~a~~~~nra~a~~~l~~~~~Ai 171 (399)
+++.+..+..++.+|+.+++.|+|.+|+..|++||.+ +| ++.+|+|+|.||+++++|..|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 4556778999999999999999999999999999999 77 7899999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 172 RDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 172 ~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.+|++||+++|+++++|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 999999999999999999999999999999999999999999999984
No 3
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.79 E-value=2e-18 Score=144.50 Aligned_cols=112 Identities=23% Similarity=0.252 Sum_probs=103.2
Q ss_pred HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------
Q 044737 113 EKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS------- 184 (399)
Q Consensus 113 e~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~------- 184 (399)
...+.|..+++.|+.+++.|+|++|+.+|++||.++| ++.+|.++|.||+.+++|++|+.+|++||+++|++
T Consensus 3 ~~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 82 (127)
T 4gcn_A 3 AMTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHH
Confidence 3467889999999999999999999999999999999 99999999999999999999999999999998876
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHHHHHHH
Q 044737 185 AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVL 224 (399)
Q Consensus 185 ~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~~~~~l 224 (399)
+++|+++|.++..+++|++|+..|+++++++|+..+...|
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~~~~~~l 122 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKV 122 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCHHHHHHH
Confidence 4689999999999999999999999999999987643333
No 4
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.78 E-value=1.2e-18 Score=152.07 Aligned_cols=104 Identities=23% Similarity=0.221 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S------------AIMYATRASVYIKMKKPNAAIRDATAALEI- 180 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~------------a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l- 180 (399)
...+..++..|+.+++.|+|++|+..|++||+++| + +.+|+|+|.|+.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 56788999999999999999999999999999998 4 349999999999999999999999999999
Q ss_pred ------CCCCHHHH----HHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 181 ------NPDSAKGY----KTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 181 ------~p~~~~a~----~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+|+++++| +++|.++..+|+|++|+.+|++|++++|++
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 99999999 999999999999999999999999999987
No 5
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=4.1e-17 Score=134.64 Aligned_cols=103 Identities=25% Similarity=0.330 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
..+..++.+|..++..|+|++|+..|+++|.++| ++.+|.++|.||+++++|++|+.+|+++++++|+++.+|+++|.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3578899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhC------CcH
Q 044737 195 HAMLGHWEEAVHDLHVASKID------FDE 218 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ld------p~~ 218 (399)
+..+|++++|+.+|+++++++ |++
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~p~~~~~p~~ 111 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKDAEVNNGSSA 111 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTTH
T ss_pred HHHHhCHHHHHHHHHHHHHhCcccCCchhH
Confidence 999999999999999999999 776
No 6
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.75 E-value=3.7e-17 Score=141.71 Aligned_cols=107 Identities=12% Similarity=0.047 Sum_probs=102.9
Q ss_pred HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 044737 113 EKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTR 191 (399)
Q Consensus 113 e~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~ 191 (399)
-..+.+..+...|..+++.|+|++|+..|.+++.++| ++.+|.++|.||..+|+|++|+..|++|++++|+++.+|+++
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 3456677899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 192 GMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 192 g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
|.+|..+|++++|+..|+++++++|++.
T Consensus 111 g~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999985
No 7
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.72 E-value=1.2e-16 Score=138.36 Aligned_cols=105 Identities=20% Similarity=0.311 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
...+..+...|..++..|+|++|+.+|+++|.++| +..+|+++|.||+.+++|++|+.+|+++|+++|+++.+|+++|.
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|..+|+|++|+.+|+++++++|++.
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999984
No 8
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.69 E-value=5.7e-16 Score=131.18 Aligned_cols=105 Identities=13% Similarity=0.122 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
.+.+..+...|..++..|+|++|+..|.+++.++| ++.+|.++|.||..+++|++|+..|++++.++|+++.+|+++|.
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 94 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 44567889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|..+|++++|+..|+++++++|++.
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~~p~~~ 120 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARALAAAQP 120 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCG
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999763
No 9
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.68 E-value=1.8e-15 Score=147.45 Aligned_cols=124 Identities=22% Similarity=0.247 Sum_probs=111.7
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C---------------HHHHHHHHHHHHHcCCHHHHHHHH
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S---------------AIMYATRASVYIKMKKPNAAIRDA 174 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~---------------a~~~~nra~a~~~l~~~~~Ai~d~ 174 (399)
.+.....+..++.+|+.+++.|+|++|+..|.+||.++| + +.+|.++|.||+++++|++|+.+|
T Consensus 140 ~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 219 (336)
T 1p5q_A 140 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 219 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 355677889999999999999999999999999999999 6 799999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhH
Q 044737 175 TAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRI 234 (399)
Q Consensus 175 ~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~ 234 (399)
++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++ .+...+..+...+++.
T Consensus 220 ~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 220 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 4445555554444443
No 10
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.68 E-value=7.7e-16 Score=132.18 Aligned_cols=105 Identities=11% Similarity=0.095 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
...+..+...|..++..|+|++|+..|.+++.++| ++.+|.++|.||..+|+|++|+..|++++.++|+++.+|+++|.
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 97 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 45677889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|..+|++++|+..|+++++++|++.
T Consensus 98 ~~~~~g~~~~A~~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQELIANXP 123 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 99999999999999999999999863
No 11
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.67 E-value=1.3e-15 Score=154.82 Aligned_cols=122 Identities=20% Similarity=0.249 Sum_probs=108.0
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C---------------HHHHHHHHHHHHHcCCHHHHHHHHH
Q 044737 112 DEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S---------------AIMYATRASVYIKMKKPNAAIRDAT 175 (399)
Q Consensus 112 ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~---------------a~~~~nra~a~~~l~~~~~Ai~d~~ 175 (399)
+.....+..++.+|+.+++.++|.+|+.+|.+||.++| + +.+|+|+|.||+++++|.+|+.+|+
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 56678899999999999999999999999999999999 6 7999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHh
Q 044737 176 AALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALR 233 (399)
Q Consensus 176 ~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k 233 (399)
+||+++|+++++|+++|.+|..+++|++|+.+|++|++++|++ .+...+..+...+++
T Consensus 342 ~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 400 (457)
T 1kt0_A 342 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKE 400 (457)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHH
T ss_pred HHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 344455555444443
No 12
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.66 E-value=1.2e-15 Score=131.10 Aligned_cols=105 Identities=11% Similarity=-0.027 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
.+.+..+...|..|++.|+|++|+..|+++|+++| ++.+|.++|.+|..++++++|+..|+++|+++|+++.+|+++|.
T Consensus 28 p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 107 (150)
T 4ga2_A 28 RQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAE 107 (150)
T ss_dssp HHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34556778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHH-HHHHHhhCCcHH
Q 044737 194 AHAMLGHWEEAVHD-LHVASKIDFDEE 219 (399)
Q Consensus 194 a~~~lg~~eeA~~~-l~~Al~ldp~~~ 219 (399)
+|..++++++|+.. +++|++++|++.
T Consensus 108 ~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 108 LLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 99999999887776 599999999985
No 13
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.66 E-value=2.5e-15 Score=124.69 Aligned_cols=101 Identities=30% Similarity=0.399 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
.+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|+.+++|+.|+..|.++++++|+++.+|+++|.++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 356889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhCCc
Q 044737 196 AMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 196 ~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
..+|++++|+..|+++++++|+
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHChh
Confidence 9999999999999999999987
No 14
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.66 E-value=3.3e-15 Score=133.14 Aligned_cols=118 Identities=25% Similarity=0.263 Sum_probs=107.6
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CH----------------HHHHHHHHHHHHcCCHHHHHHH
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SA----------------IMYATRASVYIKMKKPNAAIRD 173 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a----------------~~~~nra~a~~~l~~~~~Ai~d 173 (399)
.++....+..++..|+.++..++|++|+..|.+++.+.| +. .+|.++|.||+.+++|++|+.+
T Consensus 31 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 31 DEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 456677889999999999999999999999999999999 65 8999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH-HHHHHHHHh
Q 044737 174 ATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE-IAAVLKKVE 228 (399)
Q Consensus 174 ~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~-~~~~lk~v~ 228 (399)
|++++.++|+++.+|+++|.+|..+|+|++|+..|+++++++|++. +...+..+.
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999883 344444443
No 15
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.64 E-value=3.8e-15 Score=147.41 Aligned_cols=117 Identities=24% Similarity=0.278 Sum_probs=107.5
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----------------hCC-CHHHHHHHHHHHHHcCCHHHHHHH
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIM----------------LNP-SAIMYATRASVYIKMKKPNAAIRD 173 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~----------------l~P-~a~~~~nra~a~~~l~~~~~Ai~d 173 (399)
.++....+..++..|+.+++.++|++|+..|++||+ ++| .+.+|.++|.||+++++|++|+.+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 456677889999999999999999999999999999 788 899999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH-HHHHHHHH
Q 044737 174 ATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE-IAAVLKKV 227 (399)
Q Consensus 174 ~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~-~~~~lk~v 227 (399)
|++||+++|+++++|+++|.+|..+++|++|+.+|++|++++|++. +...+..+
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 350 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999873 33444443
No 16
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.63 E-value=4.2e-14 Score=120.40 Aligned_cols=109 Identities=29% Similarity=0.461 Sum_probs=104.8
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYK 189 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~ 189 (399)
.......+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..+++|++|+..+.++++++|+++.+|+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 85 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYY 85 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 455677899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 190 TRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 190 ~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.+|.++..+|++++|+..|+++++++|++.
T Consensus 86 ~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 86 RRAASNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999874
No 17
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=99.63 E-value=2e-16 Score=115.96 Aligned_cols=57 Identities=33% Similarity=0.557 Sum_probs=55.0
Q ss_pred chhccCCCHHHHhhcCCHHHHHHHHHHhhChHHHHHhhcCCcHHHHHHHHHHhcCCC
Q 044737 342 DFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFGGP 398 (399)
Q Consensus 342 ~~~~~~~dpe~~~~~~dp~~~~~~~~~~~np~~~~~~~~~p~~~~~~~~l~~~~~~~ 398 (399)
.++++++||+|+.+|+||+|++++++|++||+++++||+||+|+++|++|++.|||-
T Consensus 4 ~~~kl~~dPe~~~~m~dP~~~~~lq~i~~NP~~~~~~~~dP~v~~~~~~L~~~~~g~ 60 (62)
T 2lnm_A 4 VISKIMENPDVAMAFQNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPGM 60 (62)
T ss_dssp HHHHHTTSHHHHHHTTSHHHHHHHHHHTTCGGGHHHHTTCHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHcChHHHHHcCCHHHHHHHHHHHHCHHHHHHHHhChHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999999999999999999999999985
No 18
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.63 E-value=3.8e-15 Score=148.15 Aligned_cols=133 Identities=14% Similarity=0.081 Sum_probs=119.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHH
Q 044737 114 KREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKK-PNAAIRDATAALEINPDSAKGYKTR 191 (399)
Q Consensus 114 ~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~-~~~Ai~d~~~Al~l~p~~~~a~~~~ 191 (399)
..+.+..+..+|..+...|+|++|+.+|+++|.++| +..+|++||.+|..+++ +++|+.+|++||+++|++..+|+++
T Consensus 93 ~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~ 172 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHR 172 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 345677899999999999999999999999999999 99999999999999997 9999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 192 GMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 192 g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
|.++..+|++++|+.+|++|++++|++ .++..+..+...++++.++...|++.-.
T Consensus 173 g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~ 228 (382)
T 2h6f_A 173 RVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLK 228 (382)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 999999999999999999999999998 5677777777777777777776665544
No 19
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.62 E-value=7.9e-15 Score=157.18 Aligned_cols=132 Identities=20% Similarity=0.194 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
.+.+..+.+.|+.+.+.|+|++|+.+|++||+++| ++.+|+|+|.+|.++|++++|+..|++||+++|+++.+|+++|.
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~ 85 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 85 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34567788888888888888888888888888888 88888888888888888888888888888888888888888888
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+|..+|++++|+..|++|++++|++ .++..+..+...++++.++...|++.-+
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 8888888888888888888888877 4566677777777777777666655443
No 20
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.61 E-value=7.5e-15 Score=133.47 Aligned_cols=128 Identities=17% Similarity=0.137 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|+|++|+..|+++|.++| ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+.+|.++.
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYV 84 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 45778899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hc-----------CCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 197 ML-----------GHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 197 ~l-----------g~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
.+ |++++|+..|+++++++|++ .++..+..+....++..+....|++.-
T Consensus 85 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 145 (217)
T 2pl2_A 85 ALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQAL 145 (217)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 99 99999999999999999987 556677777777777777666665543
No 21
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.61 E-value=7.1e-14 Score=126.13 Aligned_cols=110 Identities=19% Similarity=0.173 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYAT----------------RASVYIKMKKPNAAIRDATAALEI 180 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~n----------------ra~a~~~l~~~~~Ai~d~~~Al~l 180 (399)
+..+..+|..++..|+|++|+.+|+++|.++| ++.+|++ +|.+|.++|+|++|+..|+++|++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999 9999999 999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHH
Q 044737 181 NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKV 227 (399)
Q Consensus 181 ~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v 227 (399)
+|+++.+|+++|.+|..+|++++|+.+|+++++++|++ .++..+..+
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 131 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNY 131 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 444455544
No 22
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.61 E-value=6.7e-15 Score=121.88 Aligned_cols=100 Identities=13% Similarity=0.048 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAML 198 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~l 198 (399)
.+...|..++..|+|++|+..|.++|.++| ++.+|+++|.+|..+|++.+|+..|++|++++|+++.+|+.+|.+|..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 367889999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCcHH
Q 044737 199 GHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 199 g~~eeA~~~l~~Al~ldp~~~ 219 (399)
|++++|+..|+++++++|++.
T Consensus 99 g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHhCcCCC
Confidence 999999999999999999863
No 23
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.60 E-value=1.9e-15 Score=147.50 Aligned_cols=116 Identities=28% Similarity=0.284 Sum_probs=99.0
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CH-----------------HHHHHHHHHHHHcCCHHHHHH
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SA-----------------IMYATRASVYIKMKKPNAAIR 172 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a-----------------~~~~nra~a~~~l~~~~~Ai~ 172 (399)
.++....+..++.+|+.+++.++|.+|+.+|.+||.++| +. .+|+|+|.||+++++|.+|+.
T Consensus 172 ~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 172 VEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 466788899999999999999999999999999999999 66 499999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH-HHHHHHH
Q 044737 173 DATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE-IAAVLKK 226 (399)
Q Consensus 173 d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~-~~~~lk~ 226 (399)
+|+++|+++|+++++|+++|.+|..+|+|++|+.+|+++++++|++. +...|..
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~ 306 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRA 306 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999883 3333433
No 24
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.60 E-value=4.1e-14 Score=112.79 Aligned_cols=104 Identities=30% Similarity=0.496 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
+.+..+...|..++..|+|++|+..|.+++.++| +..++.++|.+|..+++|++|+..+.+++.++|+++.+|+.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+..+|++++|+..|+++++++|++.
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNP 106 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999874
No 25
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.58 E-value=2e-13 Score=119.24 Aligned_cols=130 Identities=17% Similarity=0.189 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
.+..+...|+.++..|+|++|+..|+++|+++| ++.+|.++|.+|.++++++.|+..+.+++..+|+++.++..+|.++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 356788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 196 AMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 196 ~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
...++++.|+..+.++++++|++ .+...+..+....++..++...|++.-+
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~ 135 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTIS 135 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 99999999999999999999987 5566677777777777777766665444
No 26
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.58 E-value=8.7e-14 Score=137.84 Aligned_cols=162 Identities=20% Similarity=0.280 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S----AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~----a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
..+...|..++..|+|++|+..|.+++.++| + ..+|.++|.+|.++|++++|+..|++++.++|+++.+|+.+|.
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 337 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAE 337 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4445669999999999999999999999999 6 5589999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHh-----------------HHHHHHHHHHHHHH--------
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALR-----------------IEEHRRKYDRLRRE-------- 247 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k-----------------~~e~~~~ye~l~~~-------- 247 (399)
++..+|++++|+..|+++++++|++ .+...+..+...+++ ..+.++.|+++...
T Consensus 338 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~ 417 (450)
T 2y4t_A 338 AYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQN 417 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCS
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcccchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999998 455566655433322 12334455543321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 248 REERKVERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 248 ~e~kk~~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
.+.++..+++++++.+|.+++.++++|..||+|
T Consensus 418 ~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 418 EEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred chHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 233566778999999999999999999999976
No 27
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.58 E-value=5.2e-14 Score=114.31 Aligned_cols=113 Identities=19% Similarity=0.234 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS-------AKG 187 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~-------~~a 187 (399)
+.+..+...|..++..|+|++|+..|.+++.++| +..++.++|.+|..+++|++|+..|.+++.++|++ +.+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 3567889999999999999999999999999999 99999999999999999999999999999999887 999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHHHHHHHHHHh
Q 044737 188 YKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVE 228 (399)
Q Consensus 188 ~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~~~~~lk~v~ 228 (399)
|+++|.++..+|++++|+..|+++++++|+..+...+..+.
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~ 122 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAE 122 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999765555554443
No 28
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.58 E-value=1.1e-13 Score=112.28 Aligned_cols=108 Identities=30% Similarity=0.438 Sum_probs=102.7
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 044737 112 DEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKT 190 (399)
Q Consensus 112 ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~ 190 (399)
+.....+..+...|..++..++|++|+..|.+++.++| +..+|.++|.+|..++++++|+..+.+++.++|+++.+|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 85 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGR 85 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHH
Confidence 34456788999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 191 RGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 191 ~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|.++..++++++|+..|+++++++|++.
T Consensus 86 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 114 (131)
T 2vyi_A 86 MGLALSSLNKHVEAVAYYKKALELDPDNE 114 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCccch
Confidence 99999999999999999999999999873
No 29
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.57 E-value=6e-14 Score=114.70 Aligned_cols=110 Identities=27% Similarity=0.400 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
.+..+...|..++..++|++|+..|.+++.++| +..+|.++|.+|..++++++|+..|+++++++|+++.+|+.+|.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 456889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHH
Q 044737 196 AMLGHWEEAVHDLHVASKIDFDE-EIAAVLKK 226 (399)
Q Consensus 196 ~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~ 226 (399)
..+|++++|+..|+++++++|++ .+...+..
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 126 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 126 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 99999999999999999999987 33333333
No 30
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.57 E-value=3e-14 Score=152.67 Aligned_cols=129 Identities=24% Similarity=0.225 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+.+.|+.+++.|+|++|+..|++||+++| ++.+|+++|.+|..+|++++|+..|++||+++|+++.+|+++|.+|.
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~ 122 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHK 122 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
.+|++++|+..|++|++++|++ .+...|..+...+.++.++...|+++..
T Consensus 123 ~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~ 173 (723)
T 4gyw_A 123 DSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVS 173 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHH
Confidence 9999999999999999999998 5566677777666666666666655443
No 31
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.57 E-value=8.6e-14 Score=126.42 Aligned_cols=128 Identities=21% Similarity=0.239 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKM-----------KKPNAAIRDATAALEINPDSA 185 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l-----------~~~~~Ai~d~~~Al~l~p~~~ 185 (399)
+..+...|..++..|++++|+..|.+++.++| +..+|.++|.+|..+ |++++|+..++++++++|+++
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 45788999999999999999999999999999 999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 186 KGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 186 ~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
.+|+.+|.++..+|++++|+..|+++++++ ++ .+...+..+....++..+....|++.-.
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 179 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALE 179 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 65 5566777777777777777766665443
No 32
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=6.3e-14 Score=116.94 Aligned_cols=103 Identities=22% Similarity=0.310 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S---AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRG 192 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~---a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g 192 (399)
.+..+...|..++..++|++|+..|++++.++| + ..+|.++|.+|+.+++|++|+..|++++.++|+++.+|+++|
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 356789999999999999999999999999999 6 899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 193 MAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 193 ~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.+|..++++++|+..|+++++++|++.
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKNK 133 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 999999999999999999999999873
No 33
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.55 E-value=3.6e-15 Score=128.01 Aligned_cols=112 Identities=10% Similarity=0.050 Sum_probs=98.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHH
Q 044737 124 KAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWE 202 (399)
Q Consensus 124 ~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~e 202 (399)
.|..+...+++++||..|.+++..+| +...++++|.+|+++++|++|+..|+++|+++|+++.+|+.+|.+|..+|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH
Confidence 46777788999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHH
Q 044737 203 EAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIE 235 (399)
Q Consensus 203 eA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~ 235 (399)
+|+..|+++++++|++ .+...+..+....++..
T Consensus 83 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 116 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDLVLKIAELLCKNDVTD 116 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Confidence 9999999999999998 45555666555544443
No 34
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.55 E-value=1.5e-13 Score=124.49 Aligned_cols=101 Identities=17% Similarity=0.096 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP--SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
..+..+|..++..|+|++|+..|+++|.++| +..+++++|.||..+++|++|+..|+++++++|+++.+|+.+|.+|.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 87 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYR 87 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 6789999999999999999999999999997 88999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.+|++++|+..|+++++++|++.
T Consensus 88 ~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 88 DMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999874
No 35
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.55 E-value=1.8e-13 Score=123.43 Aligned_cols=78 Identities=14% Similarity=0.087 Sum_probs=73.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcC
Q 044737 122 KAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLG 199 (399)
Q Consensus 122 k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg 199 (399)
...|..++..|+|++|+..|+++|+++| +..+|.++|.+|+.+|++++|+..|+++|+++|+++.+|+++|.+|+..+
T Consensus 58 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 58 TELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 3499999999999999999999999999 99999999999999999999999999999999999999999998876554
No 36
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.54 E-value=1.2e-13 Score=113.27 Aligned_cols=100 Identities=20% Similarity=0.171 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-SA---IMYATRASVYIKMKKPNAAIRDATAALEINPDS---AKGYKTRG 192 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a---~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---~~a~~~~g 192 (399)
.+...|..++..|+|++|+..|.+++..+| +. .+++++|.+|+.+++|++|+..|++++.++|++ +.+++++|
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 467889999999999999999999999999 65 799999999999999999999999999999999 89999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 193 MAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 193 ~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.++..+|++++|+..|++++++.|++.
T Consensus 84 ~~~~~~g~~~~A~~~~~~~~~~~p~~~ 110 (129)
T 2xev_A 84 LSQYGEGKNTEAQQTLQQVATQYPGSD 110 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCh
Confidence 999999999999999999999999875
No 37
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.53 E-value=4.4e-13 Score=121.33 Aligned_cols=110 Identities=22% Similarity=0.174 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSA-------KGYKT 190 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~-------~a~~~ 190 (399)
..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..++++++|+..|+++++++|+++ .+|+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 122 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLK 122 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 3566799999999999999999999999999 999999999999999999999999999999999998 77999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCc--H-HHHHHHHHHh
Q 044737 191 RGMAHAMLGHWEEAVHDLHVASKIDFD--E-EIAAVLKKVE 228 (399)
Q Consensus 191 ~g~a~~~lg~~eeA~~~l~~Al~ldp~--~-~~~~~lk~v~ 228 (399)
+|.++..+|++++|+..|+++++++|+ + .+...+..+.
T Consensus 123 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 163 (228)
T 4i17_A 123 EGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLF 163 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHH
Confidence 999999999999999999999999999 6 3444455544
No 38
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.52 E-value=6.5e-14 Score=139.29 Aligned_cols=113 Identities=14% Similarity=0.135 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGK-LDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~-~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
+..|..+|..+...|+ |++|+.+|+++|.++| +..+|++||.+|..+++|++|+.+|++||+++|++..+|+++|.++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~ 210 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVI 210 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHH
Confidence 5678899999999997 9999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHH
Q 044737 196 AMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPN 230 (399)
Q Consensus 196 ~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~ 230 (399)
..+|+|++|+.+|+++++++|++ .++..+..+...
T Consensus 211 ~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 211 QEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998 555555555444
No 39
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.52 E-value=3.3e-14 Score=123.69 Aligned_cols=90 Identities=17% Similarity=0.137 Sum_probs=84.9
Q ss_pred HcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 044737 130 SEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKP----------NAAIRDATAALEINPDSAKGYKTRGMAHAML 198 (399)
Q Consensus 130 ~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~----------~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~l 198 (399)
+.+.|++|+..|.++|+++| ++.+|+++|.++..++++ ++|+..|++||+++|+++.+|+++|.+|..+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 44678999999999999999 999999999999999875 5999999999999999999999999999988
Q ss_pred C-----------CHHHHHHHHHHHHhhCCcHH
Q 044737 199 G-----------HWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 199 g-----------~~eeA~~~l~~Al~ldp~~~ 219 (399)
| +|++|+.+|++|++++|++.
T Consensus 94 g~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred cccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 5 89999999999999999985
No 40
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.51 E-value=1.1e-13 Score=131.20 Aligned_cols=101 Identities=30% Similarity=0.401 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..++..|+.++..|+|++|+..|+++|.++| ++.+|+++|.+|+++++|++|+.+|++|++++|+++.+|+++|.+|.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
.+|+|++|+..|+++++++|++
T Consensus 84 ~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999875
No 41
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.49 E-value=1.8e-12 Score=113.11 Aligned_cols=127 Identities=17% Similarity=0.153 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|++++|+..+.+++..+| ...++.++|.++...+++..|+..+.+++.++|++..+++.+|.+|.
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~ 118 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 45788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
.+|+|++|+..|+++++++|++ .++..+..+....++..++...|++.
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 167 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKA 167 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 9999999999999999999998 55667777777777766666665543
No 42
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.48 E-value=2.5e-12 Score=103.13 Aligned_cols=102 Identities=26% Similarity=0.334 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..++|++|+..|.+++..+| +..++.++|.+|...+++++|+..+.+++.++|+++.+|+.+|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 56788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.++++++|+..|+++++++|++.
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~ 111 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNA 111 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcH
Confidence 99999999999999999999874
No 43
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.47 E-value=4.3e-13 Score=105.96 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPD--SAKGYKTRGMAHA 196 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~--~~~a~~~~g~a~~ 196 (399)
.+...|..++..++|++|+..|.+++.++| +..+|.++|.+|+.+++|++|+..++++++++|+ +..+|+.+|.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~ 87 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALR 87 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 456789999999999999999999999999 9999999999999999999999999999999999 9999999999999
Q ss_pred hc-CCHHHHHHHHHHHHhhCCcH
Q 044737 197 ML-GHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 197 ~l-g~~eeA~~~l~~Al~ldp~~ 218 (399)
.+ |++++|+..+++++..+|++
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 88 YIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHhCCHHHHHHHHHHHhhcccCC
Confidence 99 99999999999999999874
No 44
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.47 E-value=1.3e-13 Score=119.36 Aligned_cols=109 Identities=5% Similarity=-0.149 Sum_probs=100.7
Q ss_pred HHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 138 IELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 138 i~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
-..|.+++.++| +..+|+++|.+++++|+|++|+..|++++.++|+++.+|+.+|.+|..+|+|++|+.+|+++++++|
T Consensus 22 ~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P 101 (151)
T 3gyz_A 22 GATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGK 101 (151)
T ss_dssp SCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS
T ss_pred CCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCC
Confidence 356788899999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 217 DE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 217 ~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
++ .++..+..+...+++..++...|++.-.
T Consensus 102 ~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 102 NDYTPVFHTGQCQLRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp SCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 98 6677888888888888888888877655
No 45
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.7e-14 Score=107.79 Aligned_cols=53 Identities=34% Similarity=0.607 Sum_probs=50.5
Q ss_pred chhccCCCHHHHhhcCCHHHHHHHHHHhhChHHHHHhhcCCcHHHHHHHHHHh
Q 044737 342 DFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAK 394 (399)
Q Consensus 342 ~~~~~~~dpe~~~~~~dp~~~~~~~~~~~np~~~~~~~~~p~~~~~~~~l~~~ 394 (399)
.+.++|+||||+++|+||+|+.++++|++||+++++||+||+|+++|+||++.
T Consensus 12 ~~~~~m~dPEi~~im~DP~~~~~lq~~~~NP~~~~k~~~nP~v~~~i~kl~~a 64 (71)
T 2llw_A 12 TYQRAMKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTLIAA 64 (71)
T ss_dssp HHHHHHHSHHHHHHHTCTHHHHHHHHHHHCHHHHHHHHHSHHHHHHHHHHHHT
T ss_pred HHHHHhcCHHHHHHhCCHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHc
Confidence 56889999999999999999999999999999999999999999999999764
No 46
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.46 E-value=3.9e-12 Score=116.93 Aligned_cols=105 Identities=19% Similarity=0.104 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
..+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..+++|++|+..|+++++++|+++.+|+.+|.+
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~ 120 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIA 120 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHH
Confidence 4577889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcHHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDEEI 220 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~~~ 220 (399)
|..+|++++|+..|+++++++|++..
T Consensus 121 ~~~~g~~~~A~~~~~~a~~~~~~~~~ 146 (275)
T 1xnf_A 121 LYYGGRDKLAQDDLLAFYQDDPNDPF 146 (275)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCChH
Confidence 99999999999999999999999853
No 47
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.44 E-value=2.8e-12 Score=114.24 Aligned_cols=128 Identities=14% Similarity=0.105 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
..+..+...|..++..|+|++|+..|.+++ +|++.+|.++|.+|+.+++|++|+..|++++.++|+++.+|+++|.+|
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~ 81 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLY 81 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 456678899999999999999999999995 448899999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhCCcH-----------------HHHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 196 AMLGHWEEAVHDLHVASKIDFDE-----------------EIAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 196 ~~lg~~eeA~~~l~~Al~ldp~~-----------------~~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
..+|+|++|+.+|++++++.|++ .+...+..+....++..++...|++..
T Consensus 82 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 82 YQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALAT 148 (213)
T ss_dssp HHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 99999999999999999988764 334555555556666666665555443
No 48
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.44 E-value=2.8e-12 Score=111.47 Aligned_cols=102 Identities=12% Similarity=0.112 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASV-YIKMKKP--NAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a-~~~l~~~--~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+ |+..+++ ++|+..++++++++|+++.+|+.+|.
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 123 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLAS 123 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 46788999999999999999999999999999 99999999999 8899999 99999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|..+|++++|+..|+++++++|++.
T Consensus 124 ~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 124 DAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999999999873
No 49
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.44 E-value=1.6e-13 Score=111.98 Aligned_cols=90 Identities=19% Similarity=0.096 Sum_probs=83.0
Q ss_pred HcCCHHHHHHHHHHHHHh---CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHH
Q 044737 130 SEGKLDEAIELSTEAIML---NP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAV 205 (399)
Q Consensus 130 ~~g~~~~Ai~~y~~Ai~l---~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~ 205 (399)
..|+|++|+.+|.++|.+ +| +..+|.++|.+|+.+++|++|+..|+++++++|+++.+|+++|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 58 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCcHH
Q 044737 206 HDLHVASKIDFDEE 219 (399)
Q Consensus 206 ~~l~~Al~ldp~~~ 219 (399)
..|++++.++|++.
T Consensus 82 ~~~~~al~~~p~~~ 95 (117)
T 3k9i_A 82 ELLLKIIAETSDDE 95 (117)
T ss_dssp HHHHHHHHHHCCCH
T ss_pred HHHHHHHHhCCCcH
Confidence 99999999999885
No 50
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.44 E-value=7.3e-13 Score=110.39 Aligned_cols=104 Identities=17% Similarity=0.188 Sum_probs=90.5
Q ss_pred HHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HH
Q 044737 143 EAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EI 220 (399)
Q Consensus 143 ~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~ 220 (399)
+...++| .+..|.++|.+|++.|+|++|+..|++||+++|+++.+|+++|.+|..+|++++|+.+|+++++++|++ .+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 3445899 999999999999999999999999999999999999999999999999999999999999999999998 55
Q ss_pred HHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 221 AAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 221 ~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+..+..+...+++..++...|++.-+
T Consensus 84 ~~~lg~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 84 YIRKAACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 66777777777777777766655443
No 51
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.43 E-value=1.4e-13 Score=140.60 Aligned_cols=112 Identities=28% Similarity=0.445 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
+.+..+...|+.++..|+|++|+..|++||+++| ++.+|.++|.+|.++++|++|+.+|++|++++|+++.+|+++|.+
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4566778889999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKV 227 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v 227 (399)
|..+|+|++|+..|+++++++|++ .+...+..+
T Consensus 84 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 84 NMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999999999999999999987 444444444
No 52
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.43 E-value=6.6e-12 Score=101.54 Aligned_cols=109 Identities=28% Similarity=0.292 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+...|..++..|++++|+..|.+++..+| +..+|.+++.++...++++.|+..+.+++.++|.+..+|+.+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 4577889999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCcH-HHHHHHHHH
Q 044737 198 LGHWEEAVHDLHVASKIDFDE-EIAAVLKKV 227 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v 227 (399)
.|++++|+..|++++++.|.+ .....+..+
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 999999999999999999976 333334333
No 53
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.42 E-value=1.2e-11 Score=106.05 Aligned_cols=119 Identities=19% Similarity=0.223 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|++++|+..|.+++.++| +..++.++|.+|...+++++|+..+++++.++|+++.+|+.+|.++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 121 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALD 121 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHH
Confidence 34667788888888888888888888888888 88888888888888888888888888888888888888888888888
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEE 236 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e 236 (399)
.+|++++|+..|+++++++|++ .+...+..+....++..+
T Consensus 122 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 162 (186)
T 3as5_A 122 NLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEE 162 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHH
Confidence 8888888888888888888876 333344444333333333
No 54
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.41 E-value=5.2e-12 Score=114.58 Aligned_cols=100 Identities=27% Similarity=0.366 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
..+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..++++++|+..|+++++++|+++.+|+.+|.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 216 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 216 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3456777888888999999999999999999999 888899999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhC
Q 044737 195 HAMLGHWEEAVHDLHVASKID 215 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ld 215 (399)
+..+|++++|+..|+++++++
T Consensus 217 ~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 217 QIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhC
Confidence 999999999999999999888
No 55
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.41 E-value=2.3e-13 Score=108.31 Aligned_cols=94 Identities=18% Similarity=0.235 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS------AKGYK 189 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~------~~a~~ 189 (399)
.+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.||+.+++|++|+.+|+++++++|++ ..+++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467889999999999999999999999999999 99999999999999999999999999999999999 99999
Q ss_pred HHHHHHHhcCCHHHHHHHHHH
Q 044737 190 TRGMAHAMLGHWEEAVHDLHV 210 (399)
Q Consensus 190 ~~g~a~~~lg~~eeA~~~l~~ 210 (399)
++|.++..+|+++.|+..+++
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 83 RLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHhHhhhHhHHHH
Confidence 999999999999888776554
No 56
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.3e-11 Score=112.00 Aligned_cols=130 Identities=19% Similarity=0.182 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------------------------hCC-CHHHHHHHHHHHHHcCCHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIM--------------------------LNP-SAIMYATRASVYIKMKKPNA 169 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~--------------------------l~P-~a~~~~nra~a~~~l~~~~~ 169 (399)
.+..+...|..++..|+|++|+..|.+++. ++| ...+|.++|.+|+.+++|++
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 78 ISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHH
Confidence 367888999999999999999999999999 677 88999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 170 AIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 170 Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
|+..++++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++ .+...+..+....++..++...|++...
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 235 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAART 235 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997 4566677776667776666666655433
No 57
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.41 E-value=3.6e-12 Score=113.51 Aligned_cols=101 Identities=19% Similarity=0.160 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----------
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSA----------- 185 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~----------- 185 (399)
+..+...|..++..|+|++|+..|.+++.++| +..+|+++|.+|+.+++|++|+..|++++++.|.+.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 116 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF 116 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcccc
Confidence 35789999999999999999999999999999 999999999999999999999999999999888776
Q ss_pred -----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 186 -----KGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 186 -----~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
.+|+++|.+|..+|++++|+..|+++++++|++
T Consensus 117 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 117 KLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp EEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred CccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999986
No 58
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.41 E-value=3.4e-12 Score=118.21 Aligned_cols=101 Identities=20% Similarity=0.113 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S---AIMYATRASVYIKMKKPNAAIRDATAALEINPDS---AKGYKT 190 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~---a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---~~a~~~ 190 (399)
+..+...|..++..|+|++|+..|.++|..+| + ..+++++|.||+++++|.+|+..|+++|+++|++ +.+|++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 94 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYE 94 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHH
Confidence 56889999999999999999999999999999 7 8999999999999999999999999999998854 679999
Q ss_pred HHHHHHh--------cCCHHHHHHHHHHHHhhCCcH
Q 044737 191 RGMAHAM--------LGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 191 ~g~a~~~--------lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+|.++.. +|++++|+..|+++++++|++
T Consensus 95 lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 95 RAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 9999999 999999999999999999987
No 59
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.39 E-value=2.3e-11 Score=104.19 Aligned_cols=130 Identities=14% Similarity=0.095 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
..+..+...|..++..|++++|+..|.+++.++| +..++..+|.+|...+++++|+..+.++++++|++..+|+.+|.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 85 (186)
T 3as5_A 6 IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLT 85 (186)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3467788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
+...+++++|+..|+++++++|++ .+...+..+....++..+....++...
T Consensus 86 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 137 (186)
T 3as5_A 86 YVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIAL 137 (186)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 999999999999999999999987 445556666666666666666665543
No 60
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.39 E-value=1.8e-11 Score=113.32 Aligned_cols=129 Identities=14% Similarity=-0.017 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP----SAIMYATRASVYIK--------MKKPNAAIRDATAALEINPDSA 185 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P----~a~~~~nra~a~~~--------l~~~~~Ai~d~~~Al~l~p~~~ 185 (399)
+..+...|..++..|+|++|+..|.++|.++| ...+++++|.||+. ++++.+|+..|+++++++|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 56789999999999999999999999999988 36789999999999 9999999999999999999986
Q ss_pred HHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHhhCCcH----HHHHHHHHHhHHH----------HhH
Q 044737 186 KGY-----------------KTRGMAHAMLGHWEEAVHDLHVASKIDFDE----EIAAVLKKVEPNA----------LRI 234 (399)
Q Consensus 186 ~a~-----------------~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~----~~~~~lk~v~~~~----------~k~ 234 (399)
.++ +.+|.+|..+|+|++|+..|+++++..|++ .+...+..+...+ +++
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~ 211 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERY 211 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchH
Confidence 665 889999999999999999999999999984 2344555555544 556
Q ss_pred HHHHHHHHHHHH
Q 044737 235 EEHRRKYDRLRR 246 (399)
Q Consensus 235 ~e~~~~ye~l~~ 246 (399)
.++...|+.+..
T Consensus 212 ~~A~~~~~~~~~ 223 (261)
T 3qky_A 212 RRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666665544
No 61
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.39 E-value=4.4e-12 Score=129.10 Aligned_cols=127 Identities=17% Similarity=0.115 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKL-DEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~-~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
+..+..+|..++..++| ++|+.+|.++++++| ++.+|+++|.+|+.+++|++|+..|++|++++|+ ..+|+++|.+|
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~ 180 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVL 180 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHH
Confidence 56788999999999999 999999999999999 9999999999999999999999999999999999 79999999999
Q ss_pred Hhc---------CCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHH--------HhHHHHHHHHHHHH
Q 044737 196 AML---------GHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNA--------LRIEEHRRKYDRLR 245 (399)
Q Consensus 196 ~~l---------g~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~--------~k~~e~~~~ye~l~ 245 (399)
..+ |+|++|+..|+++++++|++ .++..+..+.... +++.++...|++.-
T Consensus 181 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 181 RQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 999 99999999999999999997 5566666666555 66666665555443
No 62
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.38 E-value=1.6e-11 Score=116.59 Aligned_cols=102 Identities=25% Similarity=0.321 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
.++.+...|..++..|+|++|+..|.+++..+| +..+|.++|.+|+.+++|++|+..|+++++++|++..+|+.+|.++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 356889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhCC---cH
Q 044737 196 AMLGHWEEAVHDLHVASKIDF---DE 218 (399)
Q Consensus 196 ~~lg~~eeA~~~l~~Al~ldp---~~ 218 (399)
..+|++++|+..|+++++++| ++
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~~~~~~ 107 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNPSEQEE 107 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCCCHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCcccCh
Confidence 999999999999999999999 66
No 63
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.38 E-value=4.4e-12 Score=102.63 Aligned_cols=83 Identities=16% Similarity=0.141 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 136 EAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 136 ~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
.|+..|.+++.++| +..+|+++|.+|+.+++|++|+..|++++.++|+++.+|+.+|.+|..+|++++|+..|++++++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 58999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcH
Q 044737 215 DFDE 218 (399)
Q Consensus 215 dp~~ 218 (399)
+|..
T Consensus 83 ~~~~ 86 (115)
T 2kat_A 83 AQSR 86 (115)
T ss_dssp HHHH
T ss_pred cccc
Confidence 9865
No 64
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.38 E-value=1.3e-12 Score=111.76 Aligned_cols=110 Identities=9% Similarity=-0.010 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 044737 137 AIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKID 215 (399)
Q Consensus 137 Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ld 215 (399)
+-..|.+++.++| +..+++++|.+++..|+|.+|+..|++++.++|+++.+|+.+|.+|..+|+|++|+..|++++.++
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 3456889999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 216 FDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 216 p~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
|++ .....+..+...+++..++...|++...
T Consensus 86 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 86 IXEPRFPFHAAECLLQXGELAEAESGLFLAQE 117 (148)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 998 5667778888888888888877766544
No 65
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.38 E-value=1.2e-12 Score=139.22 Aligned_cols=125 Identities=11% Similarity=-0.013 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+..+|..++..|+|++|+..|+++++++| ++.+|+++|.+|+.+|+|++|+.+|++||+++|+++.+|+++|.+|.
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~ 512 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAE 512 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 35678889999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDR 243 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~ 243 (399)
.+|+|++ +.+|++|++++|++ .++..+..+...+++..++...|++
T Consensus 513 ~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 559 (681)
T 2pzi_A 513 LAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDE 559 (681)
T ss_dssp HHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 9999999 99999999999988 5566777777777777777666654
No 66
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.38 E-value=2.6e-11 Score=107.55 Aligned_cols=130 Identities=17% Similarity=0.094 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
..+..+...|..++..|++++|+..|.+++.++| +..+|..+|.+|..++++++|+..+.+++.++|++..+|+.+|.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 85 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWF 85 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhc-CCHHHHHHHHHHHHh--hCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 195 HAML-GHWEEAVHDLHVASK--IDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 195 ~~~l-g~~eeA~~~l~~Al~--ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
+..+ |++++|+..|+++++ .+|.+ .+...+..+....++..+....++...
T Consensus 86 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 140 (225)
T 2vq2_A 86 LCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSL 140 (225)
T ss_dssp HHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999 999999999999999 66665 445556666666666666666655443
No 67
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.38 E-value=2.5e-12 Score=130.91 Aligned_cols=123 Identities=11% Similarity=0.092 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISE---------GKLDEAIELSTEAIMLNP-SAIMYATRASVYIKM--------KKPNAAIRDATAALEI 180 (399)
Q Consensus 119 ~~~k~~g~~~~~~---------g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l--------~~~~~Ai~d~~~Al~l 180 (399)
..+...|..++.. |+|++|+..|.+|+.++| +..+|+++|.+|..+ ++|++|+..|++|+++
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 5677889999999 999999999999999999 999999999999999 9999999999999999
Q ss_pred CC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHH
Q 044737 181 NP---DSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKY 241 (399)
Q Consensus 181 ~p---~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~y 241 (399)
+| +++.+|+++|.+|..+|+|++|+..|+++++++|++ .++..+..+...++++.+....|
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~~~ 315 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESK 315 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99 999999999999999999999999999999999998 44566666666666655555444
No 68
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.38 E-value=9.7e-12 Score=128.70 Aligned_cols=129 Identities=15% Similarity=0.010 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
.+..+...|..++..|+|++|+..|+++++++| +..+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 22 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 101 (568)
T 2vsy_A 22 DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHAL 101 (568)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 356789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHH---HhHHHHHHHHHHHH
Q 044737 196 AMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNA---LRIEEHRRKYDRLR 245 (399)
Q Consensus 196 ~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~---~k~~e~~~~ye~l~ 245 (399)
..+|++++|+..|+++++++|++ .+...+..+.... ++..++...|++.-
T Consensus 102 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al 155 (568)
T 2vsy_A 102 EDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAV 155 (568)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 99999999999999999999987 4555666666666 66666666665543
No 69
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.37 E-value=6.5e-12 Score=121.27 Aligned_cols=99 Identities=19% Similarity=0.266 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+|..
T Consensus 214 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 293 (365)
T 4eqf_A 214 DLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN 293 (365)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 3456667777777777777777777777777 777777777777777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHHHHHhhCCc
Q 044737 198 LGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~ 217 (399)
+|++++|+..|+++++++|+
T Consensus 294 ~g~~~~A~~~~~~al~~~~~ 313 (365)
T 4eqf_A 294 LGAYREAVSNFLTALSLQRK 313 (365)
T ss_dssp HTCCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhCcc
Confidence 77777777777777777665
No 70
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.37 E-value=3.8e-12 Score=107.37 Aligned_cols=108 Identities=12% Similarity=0.046 Sum_probs=95.4
Q ss_pred HHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 139 ELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 139 ~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
..|.+++.++| +...++++|.+++..|+|.+|+..|++++.++|+++.+|+.+|.+|..+|+|++|+..|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 46788899999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 218 E-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 218 ~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+ .....+..+...+++..+....|++...
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 8 5566777888888888888877766554
No 71
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.36 E-value=3.3e-11 Score=108.57 Aligned_cols=126 Identities=17% Similarity=0.122 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|++++|+..|.+++.++| +..++.++|.+|..++++++|+..++++++++|++..+|+.+|.++.
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 136 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLV 136 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 46778889999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDR 243 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~ 243 (399)
.+|++++|+..|+++++++|++ .+...+..+....++..+....++.
T Consensus 137 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 184 (243)
T 2q7f_A 137 KLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAA 184 (243)
T ss_dssp HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999876 4444555555555555554444443
No 72
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.36 E-value=2.2e-11 Score=109.76 Aligned_cols=127 Identities=16% Similarity=0.142 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|++++|+..|.+++.++| +..++.++|.+|+.++++++|+..++++++++|+++.+|+.+|.++.
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLA 170 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 45677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
.+|++++|+..|+++++++|++ .+...+..+....++..++...|++.
T Consensus 171 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 219 (243)
T 2q7f_A 171 NEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKA 219 (243)
T ss_dssp HHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 9999999999999999999987 44555555555555555555544433
No 73
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.35 E-value=6.1e-11 Score=107.95 Aligned_cols=127 Identities=14% Similarity=0.134 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALE--INPDSAKGYKTRGMA 194 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~--l~p~~~~a~~~~g~a 194 (399)
+..+...|..++..|++++|+..|.+++.++| +..+|.++|.+|..++++++|+..+++++. .+|.++.+|+.+|.+
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~ 150 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLV 150 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHH
Confidence 45677888899999999999999999999999 889999999999999999999999999998 888888999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
+..+|++++|+..|+++++++|.+ .+...+..+....++..++...++..
T Consensus 151 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 201 (252)
T 2ho1_A 151 SLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLF 201 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999999999886 44556666666666666666665554
No 74
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.35 E-value=3.8e-11 Score=109.16 Aligned_cols=102 Identities=16% Similarity=0.109 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S---AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAK---GYKT 190 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~---a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~---a~~~ 190 (399)
+..+..+|..++..|+|++|+..|++++..+| + ..+++++|.+|+++++|++|+..|+++++++|++.. +|++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 45788999999999999999999999999998 4 579999999999999999999999999999999864 8999
Q ss_pred HHHHHHh------------------cCCHHHHHHHHHHHHhhCCcHH
Q 044737 191 RGMAHAM------------------LGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 191 ~g~a~~~------------------lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|.++.. +|++++|+..|+++++.+|++.
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 9999886 5799999999999999999973
No 75
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.35 E-value=1e-11 Score=119.35 Aligned_cols=101 Identities=18% Similarity=0.233 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+|.
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 296 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 296 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 45667788888888889899888888888888 88888888888888888888888888888888888888888888888
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
.+|++++|+..|+++++++|++
T Consensus 297 ~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 297 NLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHTCHHHHHHHHHHHHHHHHTC
T ss_pred HCCCHHHHHHHHHHHHHhCCCC
Confidence 8889999988888888888765
No 76
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.35 E-value=8.4e-12 Score=120.50 Aligned_cols=101 Identities=20% Similarity=0.219 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+...|..++..|+|++|+..|++++.++| +..+|.++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+|..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTN 145 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc
Confidence 3578899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCcHH
Q 044737 198 LGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|++++|+..|+++++++|++.
T Consensus 146 ~g~~~~A~~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 146 TSHQQDACEALKNWIKQNPKYK 167 (365)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHH
T ss_pred cccHHHHHHHHHHHHHhCccch
Confidence 9999999999999999999863
No 77
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.34 E-value=3.8e-11 Score=118.71 Aligned_cols=111 Identities=23% Similarity=0.286 Sum_probs=102.1
Q ss_pred ccCHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 044737 109 EVTDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKG 187 (399)
Q Consensus 109 ~~~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a 187 (399)
++.......+..+...|..++..|+|++|+..|++++.++| +..+|.++|.+|+.++++++|+..|+++++++|+++.+
T Consensus 17 ~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 96 (450)
T 2y4t_A 17 NLYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAA 96 (450)
T ss_dssp ------CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHH
Confidence 34445556788999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 188 YKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 188 ~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
|+.+|.+|..+|++++|+..|+++++++|++.
T Consensus 97 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 97 RLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999999999874
No 78
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.34 E-value=2.7e-11 Score=110.38 Aligned_cols=129 Identities=19% Similarity=0.153 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
.+..+...|..++..|+|++|+..|.+++.++| +..+|..+|.+|..++++++|+..+.++++++|++..+|+.+|.+|
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 115 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHH
Confidence 478899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHh--hCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 196 AMLGHWEEAVHDLHVASK--IDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 196 ~~lg~~eeA~~~l~~Al~--ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
..+|++++|+..|++++. .+|.+ .+...+..+....++..+....+++..
T Consensus 116 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 168 (252)
T 2ho1_A 116 YEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSL 168 (252)
T ss_dssp HHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 999999999999999999 77876 445556666656666666666655543
No 79
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.34 E-value=3e-12 Score=111.31 Aligned_cols=120 Identities=12% Similarity=0.114 Sum_probs=103.3
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHhcCCH--H
Q 044737 127 EAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA-HAMLGHW--E 202 (399)
Q Consensus 127 ~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a-~~~lg~~--e 202 (399)
.++..++|++|+..|.+++..+| +..+|..+|.+|+..++|..|+..|.++++++|+++.+|+.+|.+ +...+++ +
T Consensus 19 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~ 98 (177)
T 2e2e_A 19 QFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTA 98 (177)
T ss_dssp CCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCH
T ss_pred hhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchH
Confidence 35677899999999999999999 999999999999999999999999999999999999999999999 8899999 9
Q ss_pred HHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 203 EAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 203 eA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+|+..|+++++++|++ .+...+..+....++..++...|++.-.
T Consensus 99 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 99 QTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 9999999999999997 5566777777777777777777766544
No 80
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.34 E-value=1.6e-11 Score=119.69 Aligned_cols=126 Identities=22% Similarity=0.115 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|.+.|++++|+..|.++++++|++..++..+|.++.
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 146 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLK 146 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 45678888888888888888888888888888 88888888888888888888888888888888888888888888888
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDR 243 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~ 243 (399)
.+|++++|+..|+++++++|++ ..+..+..+....+++.+....|++
T Consensus 147 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 194 (388)
T 1w3b_A 147 ALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEK 194 (388)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 8888888888888888888876 3444555555444555554444443
No 81
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.33 E-value=7.9e-12 Score=109.19 Aligned_cols=121 Identities=15% Similarity=0.095 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHH-----------------------
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDAT----------------------- 175 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~----------------------- 175 (399)
.+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|+.+|++++|+..++
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 87 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQ 87 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhh
Confidence 456677788888888888888888888888 88888888888888888777665444
Q ss_pred -----------HHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH---HHHHHHHHHhHHHHhHHHHHHH
Q 044737 176 -----------AALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE---EIAAVLKKVEPNALRIEEHRRK 240 (399)
Q Consensus 176 -----------~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~---~~~~~lk~v~~~~~k~~e~~~~ 240 (399)
++++++|+++.+|+.+|.++..+|++++|+..|+++++++|+. .++..+..+...+++..+....
T Consensus 88 ~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred cccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 4455567777777777777777777777777777777777653 2344444444444443333333
No 82
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.4e-11 Score=123.41 Aligned_cols=105 Identities=27% Similarity=0.329 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 114 KREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 114 ~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
..+.+..++.+|+.+++.|+|++|+..|++++.++|+..+|.++|.||+++|+|++|+.+|+++++++|+++.+|+.+|.
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 81 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRAS 81 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 35678999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+|..+|++++|+..|+++++++|.+
T Consensus 82 ~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 82 ANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999854
No 83
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.32 E-value=6.8e-11 Score=112.15 Aligned_cols=110 Identities=24% Similarity=0.326 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SA----IMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a----~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
......|..++..|+|++|+..|.+++.++| +. .+|.++|.+|.+++++++|+..|+++++++|+++.+|+.+|.
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 314 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAE 314 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3455679999999999999999999999999 65 457789999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcHH-HHHHHHHHh
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDEE-IAAVLKKVE 228 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~~-~~~~lk~v~ 228 (399)
++..+|++++|+..|+++++++|++. +...+..+.
T Consensus 315 ~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 350 (359)
T 3ieg_A 315 AYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQ 350 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 99999999999999999999999974 344444443
No 84
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.32 E-value=3.7e-11 Score=117.06 Aligned_cols=99 Identities=18% Similarity=0.160 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAML 198 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~l 198 (399)
.+...|..+...|++++|+..|.+++.++| +..+|.++|.+|...+++.+|+..|+++++++|+++.+|+.+|.++...
T Consensus 137 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 216 (388)
T 1w3b_A 137 VRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA 216 (388)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc
Confidence 344445555555555555555555555555 5555555555555555555555555555555555555555555555555
Q ss_pred CCHHHHHHHHHHHHhhCCcH
Q 044737 199 GHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 199 g~~eeA~~~l~~Al~ldp~~ 218 (399)
+++++|+..|++++.++|++
T Consensus 217 ~~~~~A~~~~~~al~~~p~~ 236 (388)
T 1w3b_A 217 RIFDRAVAAYLRALSLSPNH 236 (388)
T ss_dssp TCTTHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHhhCcCC
Confidence 55555555555555555544
No 85
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.32 E-value=6.8e-11 Score=104.82 Aligned_cols=126 Identities=15% Similarity=0.065 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKM-KKPNAAIRDATAALE--INPDSAKGYKTRGM 193 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l-~~~~~Ai~d~~~Al~--l~p~~~~a~~~~g~ 193 (399)
+..+...|..++..|++++|+..|.+++.++| +..++.++|.+|..+ +++++|+..++++++ .+|.+..+|+.+|.
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGI 121 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHH
Confidence 34678899999999999999999999999999 999999999999999 999999999999999 67777899999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDR 243 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~ 243 (399)
++..+|++++|+..|+++++++|++ .....+..+....++..+....++.
T Consensus 122 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 172 (225)
T 2vq2_A 122 CSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKK 172 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999999987 4455555555555555555544443
No 86
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.32 E-value=3e-11 Score=114.56 Aligned_cols=116 Identities=16% Similarity=0.134 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHH---------------------
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDAT--------------------- 175 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~--------------------- 175 (399)
...+...|..++..|++++|+..|.+++.++| +..+++++|.+|+.+|++++|+..++
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~ 196 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELL 196 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHH
Confidence 45678999999999999999999999999999 99999999999999999998765544
Q ss_pred -------------HHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH---HHHHHHHHHhHHHHh
Q 044737 176 -------------AALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE---EIAAVLKKVEPNALR 233 (399)
Q Consensus 176 -------------~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~---~~~~~lk~v~~~~~k 233 (399)
+++.++|+++.+++.+|.+|...|++++|+..|+++++++|++ .+...+..+...+++
T Consensus 197 ~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 270 (287)
T 3qou_A 197 XQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGT 270 (287)
T ss_dssp HHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCT
T ss_pred hhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCC
Confidence 4566677788888888888888888888888888888888765 233344444444333
No 87
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.32 E-value=6.5e-12 Score=133.65 Aligned_cols=109 Identities=13% Similarity=-0.038 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+..+|..++..|+|++|+..|++||+++| +..+|+++|.+|.++|+|++ +.+|++||+++|+++.+|+++|.+|.
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 45677999999999999999999999999999 99999999999999999999 99999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcHH-HHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDEE-IAAVLKKV 227 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~~-~~~~lk~v 227 (399)
.+|++++|+.+|++|++++|++. ++..+..+
T Consensus 546 ~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 546 AEGDRVGAVRTLDEVPPTSRHFTTARLTSAVT 577 (681)
T ss_dssp HTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHhhcccCcccHHHHHHHHHH
Confidence 99999999999999999999984 34344444
No 88
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.31 E-value=1e-11 Score=114.24 Aligned_cols=121 Identities=16% Similarity=0.101 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS----AKGYKTRGMA 194 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~----~~a~~~~g~a 194 (399)
.+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|+.+++|++|+..|++++. .|.+ ..+|+.+|.+
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~ 83 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKI 83 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHH
Confidence 345556666666666666666666666666 555666666666666666666666666665 2222 3345666666
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKY 241 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~y 241 (399)
+..+|++++|+..|+++++++|++ .++..+..+....+++.++...|
T Consensus 84 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 131 (272)
T 3u4t_A 84 LMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYM 131 (272)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHH
Confidence 666666666666666666666655 33444444444444444444433
No 89
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.29 E-value=6.1e-11 Score=111.32 Aligned_cols=100 Identities=17% Similarity=0.197 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|++++|+..|.+++.++| +..+|.++|.+|..++++++|+..++++++++|++..+|+.+|.++.
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 251 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS 251 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 34567788999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCc
Q 044737 197 MLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~ 217 (399)
.+|++++|+..|+++++++|+
T Consensus 252 ~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 252 NMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHHTT
T ss_pred HhccHHHHHHHHHHHHHhCCc
Confidence 999999999999999999988
No 90
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.29 E-value=6.1e-11 Score=95.74 Aligned_cols=99 Identities=28% Similarity=0.325 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+...|..++..+++++|+..|.+++.++| +..++.++|.+|...+++++|+..+.+++.++|.+..+|+.+|.++..
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 4567789999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCc
Q 044737 198 LGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~ 217 (399)
+|++++|+..|++++.++|+
T Consensus 116 ~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 116 QGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TTCHHHHHHHHHHHHHHSTT
T ss_pred HccHHHHHHHHHHHHccCCC
Confidence 99999999999999999886
No 91
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.29 E-value=4.1e-11 Score=108.95 Aligned_cols=102 Identities=16% Similarity=0.080 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CH---HHHHHHHHHHHH------------------cCCHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SA---IMYATRASVYIK------------------MKKPNAAIRDAT 175 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a---~~~~nra~a~~~------------------l~~~~~Ai~d~~ 175 (399)
...+...|..+++.|+|++|+..|+++|+++| +. .+++++|.+|.. ++++++|+..|+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 35788899999999999999999999999999 53 488999999987 578999999999
Q ss_pred HHHHhCCCCHHHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 176 AALEINPDSAKGY-----------------KTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 176 ~Al~l~p~~~~a~-----------------~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
++|+.+|++..++ +.+|.+|...|+|++|+..|+++++..|++.
T Consensus 121 ~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 121 KLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 9999999997654 6789999999999999999999999999874
No 92
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.29 E-value=2.8e-11 Score=111.33 Aligned_cols=115 Identities=12% Similarity=0.009 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..+++|++|+..++++++++|+++.+|+.+|...+
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 45688999999999999999999999999999 99999999999999999999999999999999999999999994444
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNAL 232 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~ 232 (399)
..+++++|+..|+++++++|++ .....+..+...+.
T Consensus 154 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 154 YNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQD 190 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 5569999999999999999997 33444444444333
No 93
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.28 E-value=6.1e-11 Score=113.82 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+..+|..++..|+|++|+..|.+++.++| +..+|.++|.+|..++++++|+..|.++++++|+++.+|+.+|.+|..
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 144 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTN 144 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCcHH
Q 044737 198 LGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
+|++++|+..|+++++++|++.
T Consensus 145 ~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 145 ESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTG
T ss_pred cCCHHHHHHHHHHHHHhCcCcH
Confidence 9999999999999999999863
No 94
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.28 E-value=7.4e-11 Score=110.89 Aligned_cols=122 Identities=11% Similarity=-0.014 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEG-KLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 119 ~~~k~~g~~~~~~g-~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
..+...|..++..| ++++|+..|.+++.++| +..+|.++|.+|..++++++|+..+.++++++|++..+++.+|.++.
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 170 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG 170 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 34566666777777 67777777777777777 66667777777777777777777777777777777677777777777
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRK 240 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ 240 (399)
.+|++++|+..|+++++++|++ .+...+..+....++..+....
T Consensus 171 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 215 (330)
T 3hym_B 171 LTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKW 215 (330)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHH
Confidence 7777777777777777777665 3333444444434443333333
No 95
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.8e-13 Score=101.77 Aligned_cols=52 Identities=23% Similarity=0.467 Sum_probs=49.8
Q ss_pred chhccCCCHHHHhhcCCHHHHHHHHHHhhChHHHHH-hhcCCcHHHHHHHHHH
Q 044737 342 DFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQ-HQANPKVAPIIAKMMA 393 (399)
Q Consensus 342 ~~~~~~~dpe~~~~~~dp~~~~~~~~~~~np~~~~~-~~~~p~~~~~~~~l~~ 393 (399)
.+.++.+||+++++|+||+|+++|++|++||+++++ |++||+|+++|++||+
T Consensus 15 ~~~kl~~dP~t~~~~~DP~~~~~lq~i~~NP~~i~~~~~~dPrv~~~l~~L~g 67 (71)
T 2llv_A 15 LIENLKKNPKTSEMMKDPQLVAKLIGYKQNPQAIGQDLFTDPRLMTIMATLMG 67 (71)
T ss_dssp CHHHHHHSSTTHHHHHSCTHHHHHHHHHHSCTTHHHHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHcChHHHHHhcCHHHHHHHHHHHHCHHHHHHHHhhCcHHHHHHHHHHc
Confidence 458899999999999999999999999999999999 9999999999999975
No 96
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.1e-10 Score=95.49 Aligned_cols=97 Identities=20% Similarity=0.166 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHh
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVE 228 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~ 228 (399)
.+..|.++|.++++.++|.+|+..|+++|+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++ ..+..+..+.
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQ 82 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999999999998 5566777777
Q ss_pred HHHHhHHHHHHHHHHHHH
Q 044737 229 PNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 229 ~~~~k~~e~~~~ye~l~~ 246 (399)
..+++..++...|++...
T Consensus 83 ~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 83 IAVKEYASALETLDAART 100 (126)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHH
Confidence 777777777776665544
No 97
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.27 E-value=8.3e-11 Score=110.58 Aligned_cols=128 Identities=16% Similarity=0.010 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+...|..++..|+|++|+..|.+++.++| +...+.++|.+|..++++++|+..++++++++|+++.+|+.+|.++..
T Consensus 126 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 205 (330)
T 3hym_B 126 PAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ 205 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 4577888888999999999999999999998 888888899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhC---------CcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 198 LGHWEEAVHDLHVASKID---------FDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ld---------p~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+|++++|+..|++++++. |.. .+...+..+....++..++...|++...
T Consensus 206 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 264 (330)
T 3hym_B 206 NGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALV 264 (330)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999999999999998875 332 4556666666666777777766665544
No 98
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.26 E-value=4e-11 Score=99.68 Aligned_cols=69 Identities=17% Similarity=0.136 Sum_probs=66.3
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
.+.++.++|.+|++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 467889999999999999999999999999999999999999999999999999999999999999875
No 99
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.25 E-value=3.1e-11 Score=122.03 Aligned_cols=106 Identities=27% Similarity=0.413 Sum_probs=95.8
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 044737 112 DEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKT 190 (399)
Q Consensus 112 ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~ 190 (399)
++....+..+..+|+.+++.|+|++|+..|++++.++| ++.+|.++|.||+++|+|++|+..|+++++++|+++.+|+.
T Consensus 19 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 19 SQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34456789999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 191 RGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 191 ~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+|.++..+|++++|+..|+ ++.++|+.
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCC
Confidence 9999999999999999995 88888875
No 100
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.25 E-value=6.6e-11 Score=112.14 Aligned_cols=103 Identities=17% Similarity=0.021 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C------HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC---
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S------AIMYATRASVYIKM-KKPNAAIRDATAALEINPDS--- 184 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~------a~~~~nra~a~~~l-~~~~~Ai~d~~~Al~l~p~~--- 184 (399)
..+..+.+.|..+...|+|++|+.+|.+||.+.+ . +.+|.++|.+|... +++++|+..|++||++.|..
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 3467888999999999999999999999999876 2 67889999999995 99999999999999998754
Q ss_pred ---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 185 ---AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 185 ---~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
..+|.++|.+|..+|+|++|+..|++++++.|++
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 5678899999999999999999999999998875
No 101
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.24 E-value=1.7e-10 Score=109.84 Aligned_cols=128 Identities=16% Similarity=0.040 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASV--YIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a--~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
...+...|..+.+.|++++|+..|.+++.++| ........+.+ +...+++++|+..|+++++.+|+++.+|+.+|.+
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~ 209 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAAC 209 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 34677778888888888888888888888888 64333322222 2233778888888888888888888888888888
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHH-HHHHHHHHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEE-HRRKYDRLR 245 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e-~~~~ye~l~ 245 (399)
+..+|+|++|+..|+++++++|++ .+...+..+....++..+ ...+++++.
T Consensus 210 ~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~ 262 (291)
T 3mkr_A 210 HMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLK 262 (291)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 888888888888888888888887 444455555444555433 234444443
No 102
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.24 E-value=1.3e-10 Score=106.43 Aligned_cols=127 Identities=24% Similarity=0.192 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI----- 180 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l----- 180 (399)
...+..+...|..++..|+|++|+..|.+++.+ +| ...+|.++|.+|..++++++|+..|.+++.+
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 345778899999999999999999999999988 35 8899999999999999999999999999998
Q ss_pred ---CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh--------CCcH-HHHHHHHHHhHHHHhHHHHHHHH
Q 044737 181 ---NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKI--------DFDE-EIAAVLKKVEPNALRIEEHRRKY 241 (399)
Q Consensus 181 ---~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l--------dp~~-~~~~~lk~v~~~~~k~~e~~~~y 241 (399)
+|....+|+.+|.+|..+|++++|+..|++++++ +|.. .+...+..+....++..++...+
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 192 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLY 192 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 5777899999999999999999999999999998 5544 33444555555555544444443
No 103
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.23 E-value=6e-11 Score=102.07 Aligned_cols=97 Identities=19% Similarity=0.153 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHh
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVE 228 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~ 228 (399)
.+..|+++|.+|+..++|.+|+..|+++|+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++ .++..+..+.
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 89 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLAR 89 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999999999999999999998 5677788888
Q ss_pred HHHHhHHHHHHHHHHHHH
Q 044737 229 PNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 229 ~~~~k~~e~~~~ye~l~~ 246 (399)
..++++.++...|++.-.
T Consensus 90 ~~~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 90 FDMADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHH
Confidence 888888888877776554
No 104
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.23 E-value=1.8e-10 Score=88.05 Aligned_cols=83 Identities=28% Similarity=0.336 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
.+..+...|..++..++|++|+..|.+++.++| +..+|.++|.+|..++++++|+..++++++++|+++.++..+|.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 456788889999999999999999999999999 8999999999999999999999999999999999999999999888
Q ss_pred HhcC
Q 044737 196 AMLG 199 (399)
Q Consensus 196 ~~lg 199 (399)
..+|
T Consensus 88 ~~~g 91 (91)
T 1na3_A 88 QKQG 91 (91)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 7654
No 105
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.22 E-value=8.5e-11 Score=102.27 Aligned_cols=96 Identities=18% Similarity=0.102 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALEINPD-------SAK-----GYKTRGMAHAMLGHWEEAVHDLHVASKI---- 214 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~-------~~~-----a~~~~g~a~~~lg~~eeA~~~l~~Al~l---- 214 (399)
+..+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|.+|+++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 567889999999999999999999999999999 555 9999999999999999999999999999
Q ss_pred ---CCcH-HHH----HHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 215 ---DFDE-EIA----AVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 215 ---dp~~-~~~----~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+|++ ..+ ..+..+...+++..++...|++.-+
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 9998 456 6677778888888888888877665
No 106
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.22 E-value=1.7e-10 Score=108.24 Aligned_cols=100 Identities=12% Similarity=0.035 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+..+|..++..|+|++|+..|.+++..+| +..+|..+|.+|..++++++|+..++++++++|++..+|+.+|.++..
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCcH
Q 044737 198 LGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+|++++|+..|+++++++|.+
T Consensus 102 ~~~~~~A~~~~~~~~~~~~~~ 122 (327)
T 3cv0_A 102 EHNANAALASLRAWLLSQPQY 122 (327)
T ss_dssp TTCHHHHHHHHHHHHHTSTTT
T ss_pred cCCHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999986
No 107
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.22 E-value=1.9e-11 Score=95.81 Aligned_cols=89 Identities=18% Similarity=0.224 Sum_probs=79.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcC
Q 044737 122 KAKAMEAISEGKLDEAIELSTEAIMLNP-SAI-MYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLG 199 (399)
Q Consensus 122 k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~-~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg 199 (399)
..+|..++..|+|++|+..|.+++.++| +.. +|.++|.+|+.+++|++|+..|+++++++|++..+|++ +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 5688999999999999999999999999 988 99999999999999999999999999999999988855 5
Q ss_pred CHHHHHHHHHHHHhhCCcH
Q 044737 200 HWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 200 ~~eeA~~~l~~Al~ldp~~ 218 (399)
.+.+|+..|++++.++|++
T Consensus 76 ~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHHhccCccc
Confidence 6778888888888887765
No 108
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.22 E-value=3.9e-10 Score=113.86 Aligned_cols=128 Identities=16% Similarity=0.182 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..+++|++|+..|+++++++|+++.+|+.+|.++..
T Consensus 277 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 356 (537)
T 3fp2_A 277 NSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK 356 (537)
T ss_dssp HHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4566778888888888888888888888888 888999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 198 LGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+|++++|+..|+++++++|++ .+...+..+....++..++...|++.-.
T Consensus 357 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 406 (537)
T 3fp2_A 357 QGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKR 406 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999887 5566777777777777777776665443
No 109
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.21 E-value=3.1e-10 Score=104.06 Aligned_cols=117 Identities=13% Similarity=0.067 Sum_probs=104.1
Q ss_pred HcCCHHHHHHHHHHHHHhC----C-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHH
Q 044737 130 SEGKLDEAIELSTEAIMLN----P-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEA 204 (399)
Q Consensus 130 ~~g~~~~Ai~~y~~Ai~l~----P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA 204 (399)
..++|++|+..|.+++... | ++.+|.++|.+|+.+++|.+|+..|+++++++|+++.+|+.+|.++..+|+|++|
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A 96 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 96 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHH
Confidence 3478999999999999983 4 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 205 VHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 205 ~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+..|+++++++|++ .+...+..+....++..+....|++...
T Consensus 97 ~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 97 YEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 99999999999987 5666777777777777777777766544
No 110
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.21 E-value=2e-10 Score=118.79 Aligned_cols=116 Identities=17% Similarity=0.129 Sum_probs=87.9
Q ss_pred cCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 044737 131 EGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLH 209 (399)
Q Consensus 131 ~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~ 209 (399)
.|++++|+..|.++++++| +..+|.++|.+|..+++|++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4789999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 210 VASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 210 ~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
++++++|++ .....+..+....++..++...|++.-.
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999998 5566777777777777777777766544
No 111
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.21 E-value=4.8e-10 Score=92.37 Aligned_cols=101 Identities=18% Similarity=0.101 Sum_probs=88.5
Q ss_pred HhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHH
Q 044737 146 MLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAV 223 (399)
Q Consensus 146 ~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~ 223 (399)
..+| ++..|.++|.+++..++|..|+..|.+++.++|+++.+|+.+|.++..+++|++|+..|+++++++|++ ..+..
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 4567 899999999999999999999999999999999999999999999999999999999999999999997 55667
Q ss_pred HHHHhHHHHhHHHHHHHHHHHHH
Q 044737 224 LKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 224 lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+..+....+++.+....|++...
T Consensus 83 l~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 83 LGQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHH
Confidence 77777777777777777766544
No 112
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.21 E-value=5.8e-11 Score=94.33 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=67.0
Q ss_pred hCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 147 LNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 147 l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
.+| ++.+|+++|.+|+.+|+|++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++++.|.+
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 468 899999999999999999999999999999999999999999999999999999999999999998765
No 113
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.19 E-value=1.6e-10 Score=109.42 Aligned_cols=129 Identities=13% Similarity=0.001 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-------SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS----- 184 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~----- 184 (399)
.+..+...|+.+...|+|++|+.+|.+|+.+.+ .+.+|.++|.+|..+|+|++|+..|++||.+.+..
T Consensus 36 A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~ 115 (292)
T 1qqe_A 36 AADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRR 115 (292)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 345566678888899999999999999999853 37899999999999999999999999999998754
Q ss_pred -HHHHHHHHHHHHhc-CCHHHHHHHHHHHHhhCCcH-------HHHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 185 -AKGYKTRGMAHAML-GHWEEAVHDLHVASKIDFDE-------EIAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 185 -~~a~~~~g~a~~~l-g~~eeA~~~l~~Al~ldp~~-------~~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
+.+|.++|.+|... |++++|+..|++|+++.|.+ .+...+..+...++++.++...|++..
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 185 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLI 185 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 57899999999995 99999999999999998754 123344445555555566655555443
No 114
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.18 E-value=2.1e-10 Score=111.37 Aligned_cols=97 Identities=13% Similarity=0.065 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
..+..+.+.|..+++.|+|++|+.+|++||.++| +..+|+++|.+|+.+++|++|+.+|++|++++|++..+|+.++.+
T Consensus 194 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 194 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3468899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHH-HHHHHHH
Q 044737 195 HAMLGHWEEAV-HDLHVAS 212 (399)
Q Consensus 195 ~~~lg~~eeA~-~~l~~Al 212 (399)
+..++++++|. ..|++.+
T Consensus 274 ~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 274 QQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 99999999984 4555544
No 115
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.17 E-value=6.1e-10 Score=105.90 Aligned_cols=90 Identities=14% Similarity=0.049 Sum_probs=83.5
Q ss_pred HcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHH-HHHH
Q 044737 130 SEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEE-AVHD 207 (399)
Q Consensus 130 ~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~ee-A~~~ 207 (399)
..|+|++|+..|++++..+| ++.+|.++|.+|.++|+|++|+..++++|+++|+++.+|+++|.++..+|++.+ +...
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~ 257 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRY 257 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 34899999999999999999 999999999999999999999999999999999999999999999999999976 4678
Q ss_pred HHHHHhhCCcHH
Q 044737 208 LHVASKIDFDEE 219 (399)
Q Consensus 208 l~~Al~ldp~~~ 219 (399)
++++++++|++.
T Consensus 258 ~~~~~~~~P~~~ 269 (291)
T 3mkr_A 258 LSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHCTTCH
T ss_pred HHHHHHhCCCCh
Confidence 899999999986
No 116
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.16 E-value=1.7e-09 Score=110.99 Aligned_cols=129 Identities=17% Similarity=0.099 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..+++.|++++|+..|.+++.++| +..+|..++.+|.+.|++++|+..|+++++++|++..+|+.++.+|.
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 452 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHM 452 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 45677889999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
..|++++|+..|+++++++|++ .++..+..+....+++.++...|+....
T Consensus 453 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 503 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALL 503 (597)
T ss_dssp HHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999987 4556666666666777777766665433
No 117
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.16 E-value=5.6e-10 Score=91.89 Aligned_cols=90 Identities=14% Similarity=0.113 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHH
Q 044737 152 IMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPN 230 (399)
Q Consensus 152 ~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~ 230 (399)
..++.+|.++++.|++.+|+..|+++|+++|+++.+|+.+|.++..+|++++|+..|+++++++|++ .++..+..+...
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999999999999999999999999998 445556665555
Q ss_pred HHhHHHHHHHH
Q 044737 231 ALRIEEHRRKY 241 (399)
Q Consensus 231 ~~k~~e~~~~y 241 (399)
.++..++...|
T Consensus 98 ~g~~~~A~~~~ 108 (121)
T 1hxi_A 98 EHNANAALASL 108 (121)
T ss_dssp HHHHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 55554444443
No 118
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.15 E-value=5.5e-10 Score=94.53 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA-- 194 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a-- 194 (399)
+..+...|..++..|+|++|+..|.+++.++| +..+|.++|.+|..++++++|+..+.++++++|.+..++..++.+
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 126 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 126 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45788899999999999999999999999999 999999999999999999999999999999999999988555555
Q ss_pred HHhcCCHHHHHHHHHHHHhh
Q 044737 195 HAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~l 214 (399)
+..++++++|+..+.++..+
T Consensus 127 ~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 127 IVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccchHHH
Confidence 88889999999988876554
No 119
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.14 E-value=4.5e-10 Score=102.71 Aligned_cols=102 Identities=22% Similarity=0.140 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI----- 180 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l----- 180 (399)
...+..+...|..++..|+|++|+..|.+++.+ +| ...+|.++|.+|..++++++|+..+++++.+
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 345678899999999999999999999999998 57 8999999999999999999999999999999
Q ss_pred ---CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 181 ---NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 181 ---~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
+|....+|+.+|.+|..+|++++|+..|++++++.+
T Consensus 162 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 162 GPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999998843
No 120
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.14 E-value=3e-11 Score=122.46 Aligned_cols=116 Identities=13% Similarity=0.043 Sum_probs=102.5
Q ss_pred cCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHH
Q 044737 131 EGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS---------------AKGYKTRGMA 194 (399)
Q Consensus 131 ~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---------------~~a~~~~g~a 194 (399)
.++|++|+..|..++..+| .+.+|.++|.+|+++++|..|+..|++||+++|++ ..+|+++|.|
T Consensus 247 l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 326 (457)
T 1kt0_A 247 LKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 326 (457)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 3467789999999999999 99999999999999999999999999999999998 7999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
|..+++|++|+.+|++|++++|++ .+...+..+...+.++.++...|++...
T Consensus 327 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~ 379 (457)
T 1kt0_A 327 YLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLE 379 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 999999999999999999999998 4566677777777777777777766543
No 121
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.13 E-value=3.2e-09 Score=108.87 Aligned_cols=129 Identities=12% Similarity=-0.019 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
...+...+..+.+.|++++|+..|.+++.+.| +..+|.+++.+|.+.|++++|+..++++++++|+++.+|..++.+|.
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAF 486 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 45677889999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhh------CCcH--HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKI------DFDE--EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~l------dp~~--~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
..|++++|+..|++++++ +|++ .++..+..+....+++.++...|++.-.
T Consensus 487 ~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 544 (597)
T 2xpi_A 487 NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLL 544 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999999999998 6763 5566777777777777777777766543
No 122
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.10 E-value=1.5e-09 Score=106.07 Aligned_cols=119 Identities=15% Similarity=0.160 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCC
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SA----IMYATRASVYIKMKKPNAAIRDATAALEI------NPD 183 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a----~~~~nra~a~~~l~~~~~Ai~d~~~Al~l------~p~ 183 (399)
...+..+...|..++..|+|++|+..|.+++.++| +. .+|.++|.+|+.+|+|++|+..|++++.+ ++.
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 56678889999999999999999999999999999 64 68999999999999999999999999998 677
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC------CcH-HHHHHHHHHhHHHHh
Q 044737 184 SAKGYKTRGMAHAMLGHWEEAVHDLHVASKID------FDE-EIAAVLKKVEPNALR 233 (399)
Q Consensus 184 ~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ld------p~~-~~~~~lk~v~~~~~k 233 (399)
.+.+|+.+|.+|..+|++++|+..|++++++. +.. .+...+..+....++
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 88999999999999999999999999999984 322 234455555555555
No 123
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.10 E-value=6.8e-10 Score=110.68 Aligned_cols=102 Identities=18% Similarity=0.070 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIML---------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEIN------ 181 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l---------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~------ 181 (399)
+..+...|.+++..|+|++|+..|.+|+++ +| .+..|.|+|.+|..+|+|++|+.++++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~ 130 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSP 130 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccc
Confidence 446778999999999999999999999987 56 78999999999999999999999999999873
Q ss_pred --CCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhCCcHH
Q 044737 182 --PDSAKGYKTRGMAHAMLG--HWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 182 --p~~~~a~~~~g~a~~~lg--~~eeA~~~l~~Al~ldp~~~ 219 (399)
+..+.+|..+|.++..++ +|++|+.+|++|++++|++.
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 131 YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred cchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 456889999998887664 69999999999999999984
No 124
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.10 E-value=6.7e-10 Score=103.38 Aligned_cols=132 Identities=23% Similarity=0.177 Sum_probs=109.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Q 044737 114 KREAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI---- 180 (399)
Q Consensus 114 ~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l---- 180 (399)
....+..+...|..++..|+|++|+..|.+++.+ .| .+.++.++|.+|..++++++|+..+.+++.+
T Consensus 23 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 102 (311)
T 3nf1_A 23 IPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKT 102 (311)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 3466788999999999999999999999999996 45 8999999999999999999999999999998
Q ss_pred ----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC--------CcH-HHHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 181 ----NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKID--------FDE-EIAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 181 ----~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ld--------p~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
+|....+|+.+|.+|..+|++++|+..|++++++. |.. .+...+..+....+++.++...|++..
T Consensus 103 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 103 LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46668899999999999999999999999999884 332 234455555555555666655555443
No 125
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.09 E-value=3.4e-09 Score=100.84 Aligned_cols=128 Identities=12% Similarity=-0.038 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAI-MYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~-~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
..|...|..+...|++++|+..|+++|+++| +.. +|.+++.++.+++++++|+..|++|++++|.+..+|...+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~ 179 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 4678889999999999999999999999999 776 89999999999999999999999999999999888876666544
Q ss_pred -hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 197 -MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 197 -~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
.+|++++|+..|+++++++|++ .++..+..+....++..+.+..|++.-.
T Consensus 180 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 180 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLT 231 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 3799999999999999999987 4555555666566677777777766544
No 126
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.08 E-value=1.8e-09 Score=89.80 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-------SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS--- 184 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~--- 184 (399)
...+..+...|..++..++|++|+..|.+++.+.+ .+.++.++|.+|..++++++|+..+.+++.+.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 35677899999999999999999999999999865 24689999999999999999999999999986543
Q ss_pred ---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 185 ---AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 185 ---~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
..+++++|.++..+|++++|+..|++++++..
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999998753
No 127
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.08 E-value=5.1e-10 Score=95.95 Aligned_cols=97 Identities=16% Similarity=0.087 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEI------------------NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVA 211 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l------------------~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~A 211 (399)
.+..+.++|.++++.++|..|+..|++||.+ +|.++.+|+++|.+|..+|+|++|+.+|.++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4678899999999999999999999999999 7888899999999999999999999999999
Q ss_pred HhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 212 SKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 212 l~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
++++|++ .+...+..+...++++.++...|++.-.
T Consensus 90 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 9999998 5566778888888888888887776554
No 128
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.06 E-value=1.8e-09 Score=100.37 Aligned_cols=130 Identities=22% Similarity=0.215 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEIN---- 181 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~---- 181 (399)
...+..+...|..++..|+|++|+..|.+++.+ .| ...+|.++|.+|..++++++|+..+.+++.+.
T Consensus 66 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (311)
T 3nf1_A 66 PDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 145 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhc
Confidence 445677889999999999999999999999988 35 78999999999999999999999999999984
Q ss_pred ----CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh--------CCcH-HHHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 182 ----PDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKI--------DFDE-EIAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 182 ----p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l--------dp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
|....+|+.+|.++..+|++++|+..|++++++ +|.. .+...+..+....++..++...+++.
T Consensus 146 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 221 (311)
T 3nf1_A 146 GKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEI 221 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 666789999999999999999999999999998 4444 33445555555555555555554443
No 129
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.06 E-value=1.6e-09 Score=85.58 Aligned_cols=68 Identities=15% Similarity=0.185 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+..|.++|.+++..++|.+|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 56789999999999999999999999999999999999999999999999999999999999999987
No 130
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.06 E-value=2.6e-09 Score=111.34 Aligned_cols=117 Identities=10% Similarity=0.031 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhC
Q 044737 115 REAAAEAKAKAMEAISEGK----------LDEAIELSTEAIMLNP-SAIMYATRASVYIKMK--KPNAAIRDATAALEIN 181 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~----------~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~--~~~~Ai~d~~~Al~l~ 181 (399)
.+....|..++..+...++ |++|+.+|.++|.++| +..+|+.|+.++.+++ +|++++..|+++|+++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d 139 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEAD 139 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhc
Confidence 3446788899999998888 9999999999999999 9999999999999999 7799999999999999
Q ss_pred CCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHH
Q 044737 182 PDSAKGYKTRGMAHAMLG-HWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNA 231 (399)
Q Consensus 182 p~~~~a~~~~g~a~~~lg-~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~ 231 (399)
|.+..||..|+.++..++ .++++++++.++++++|.| .++.....+...+
T Consensus 140 ~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 140 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 999999999999999999 9999999999999999998 5566555554443
No 131
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.05 E-value=7.5e-09 Score=98.43 Aligned_cols=84 Identities=15% Similarity=-0.019 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHH-hCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHH
Q 044737 135 DEAIELSTEAIM-LNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAK-GYKTRGMAHAMLGHWEEAVHDLHVA 211 (399)
Q Consensus 135 ~~Ai~~y~~Ai~-l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~-a~~~~g~a~~~lg~~eeA~~~l~~A 211 (399)
++|+..|.+||. ++| +..+|.++|.++..++++++|+..|+++|+++|.++. +|..+|.++..+|++++|+..|++|
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 160 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 160 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 556666666665 455 5556666666666666666666666666666665554 5666666666666666666666666
Q ss_pred HhhCCcH
Q 044737 212 SKIDFDE 218 (399)
Q Consensus 212 l~ldp~~ 218 (399)
++++|.+
T Consensus 161 ~~~~p~~ 167 (308)
T 2ond_A 161 REDARTR 167 (308)
T ss_dssp HTSTTCC
T ss_pred HhcCCCC
Confidence 6655544
No 132
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.05 E-value=9.5e-10 Score=110.03 Aligned_cols=129 Identities=10% Similarity=0.020 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
...+...|..++..|++++|+..|.+++.++| +..++.++|.+|..++++++|+..++++++++|+++.+|+.+|.++.
T Consensus 304 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 383 (514)
T 2gw1_A 304 SSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILT 383 (514)
T ss_dssp THHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHH
Confidence 45788899999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhCCcHH-------HHHHHHHHhHH---HHhHHHHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDEE-------IAAVLKKVEPN---ALRIEEHRRKYDRLRR 246 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~~-------~~~~lk~v~~~---~~k~~e~~~~ye~l~~ 246 (399)
.+|++++|+..|+++++++|++. +...+..+... .++..++...|+....
T Consensus 384 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~ 443 (514)
T 2gw1_A 384 DKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASK 443 (514)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 99999999999999999988763 55566666656 6666666666655443
No 133
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.04 E-value=9.7e-09 Score=95.06 Aligned_cols=123 Identities=13% Similarity=0.049 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIK----MKKPNAAIRDATAALEINPDSAKGYKTR 191 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~----l~~~~~Ai~d~~~Al~l~p~~~~a~~~~ 191 (399)
.+..+...|..++..+++++|+.+|.+++. | +..++.++|.+|.. .+++++|+..|+++++++ ++.+++.+
T Consensus 5 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~l 80 (273)
T 1ouv_A 5 DPKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLL 80 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHH
Confidence 356778889999999999999999999888 6 77888889999998 999999999999998885 78899999
Q ss_pred HHHHHh----cCCHHHHHHHHHHHHhhCCcHHHHHHHHHHhHH----HHhHHHHHHHHHHH
Q 044737 192 GMAHAM----LGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPN----ALRIEEHRRKYDRL 244 (399)
Q Consensus 192 g~a~~~----lg~~eeA~~~l~~Al~ldp~~~~~~~lk~v~~~----~~k~~e~~~~ye~l 244 (399)
|.+|.. .+++++|+..|+++++++ +..+...+..+... ..+..+...+|++.
T Consensus 81 g~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a 140 (273)
T 1ouv_A 81 GNLYYSGQGVSQNTNKALQYYSKACDLK-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 140 (273)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHH
T ss_pred HHHHhCCCCcccCHHHHHHHHHHHHHcC-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHH
Confidence 999998 999999999999998885 22344455555444 44555555555443
No 134
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.03 E-value=2.5e-09 Score=81.47 Aligned_cols=70 Identities=26% Similarity=0.334 Sum_probs=67.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
++.+|+++|.+|+..++|++|+..|.+++.++|+++.+|+.+|.++..++++++|+..|+++++++|++.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 6788999999999999999999999999999999999999999999999999999999999999999873
No 135
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.03 E-value=8e-10 Score=105.39 Aligned_cols=100 Identities=13% Similarity=0.075 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-------SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS----- 184 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~----- 184 (399)
.+..+.+.|..+...|+|++|+.+|.+|+.+.+ .+.+|.++|.+|.. ++|++|+..|++|+.+.+..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~ 153 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQ 153 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhH
Confidence 455666667777777777777777777776632 24566677777766 77777777777777665533
Q ss_pred -HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 185 -AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 185 -~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
..+|.++|.+|..+|+|++|+..|++++++.++
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 456667777777777777777777777766543
No 136
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.03 E-value=5.5e-10 Score=87.70 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=78.4
Q ss_pred hCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc--H-HHHH
Q 044737 147 LNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD--E-EIAA 222 (399)
Q Consensus 147 l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~--~-~~~~ 222 (399)
++| ++.+|.++|.+++..++|++|+..++++++++|.+..+|+.+|.++..+++|++|+..|+++++++|+ + .++.
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 80 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWA 80 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHH
Confidence 357 78889999999999999999999999999999999999999999999999999999999999999998 6 4444
Q ss_pred HHHHHhHHH-HhHHHHHH
Q 044737 223 VLKKVEPNA-LRIEEHRR 239 (399)
Q Consensus 223 ~lk~v~~~~-~k~~e~~~ 239 (399)
.+..+...+ ++..+...
T Consensus 81 ~l~~~~~~~~~~~~~A~~ 98 (112)
T 2kck_A 81 AKADALRYIEGKEVEAEI 98 (112)
T ss_dssp HHHHHHTTCSSCSHHHHH
T ss_pred HHHHHHHHHhCCHHHHHH
Confidence 555554444 44443333
No 137
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.03 E-value=5.6e-09 Score=108.83 Aligned_cols=121 Identities=18% Similarity=0.237 Sum_probs=101.7
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHH
Q 044737 112 DEKREAAAEAKAKAMEAISEGKL-DEAIELSTEAIMLNP-SAIMYATRASVYIKMKK----------PNAAIRDATAALE 179 (399)
Q Consensus 112 ee~~~~a~~~k~~g~~~~~~g~~-~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~----------~~~Ai~d~~~Al~ 179 (399)
.+.++....+........+.++| ++|+..|+++|.++| +..+|+.|+.++..+++ +++++..++++|+
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~ 101 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR 101 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH
Confidence 33344444555555556667776 578999999999999 99999999999999998 9999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHH
Q 044737 180 INPDSAKGYKTRGMAHAMLG--HWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNAL 232 (399)
Q Consensus 180 l~p~~~~a~~~~g~a~~~lg--~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~ 232 (399)
++|++..+|+.|+.++..++ +|++|+..+.+++++||.| .+|.....+...+.
T Consensus 102 ~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 102 VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAA 157 (567)
T ss_dssp HCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTC
T ss_pred hCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcC
Confidence 99999999999999999999 7799999999999999998 55655555554444
No 138
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.03 E-value=4.1e-09 Score=98.27 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S----AIMYATRASVYIKMKKPNAAIRDATAALEI------NPDSA 185 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~----a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l------~p~~~ 185 (399)
.+..+...|..++..|+|++|+..|.+++.++| + +.+|.++|.+|+.+++|..|+..+++++.+ .+..+
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 356788899999999999999999999999999 6 688999999999999999999999999988 55668
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 186 KGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 186 ~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
.+|+.+|.+|..+|++++|+..|++++++.+.
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999998654
No 139
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.03 E-value=2.8e-09 Score=103.99 Aligned_cols=130 Identities=10% Similarity=0.039 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP--------SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS-- 184 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P--------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~-- 184 (399)
...+..+...|..++..|+|++|+.+|.+|+.+.+ .+.++.++|.+|..+|+|++|+..+.+|+++.+..
T Consensus 140 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 219 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ 219 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 45678889999999999999999999999999843 46789999999999999999999999999885433
Q ss_pred ----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----C-CcH-HHHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 185 ----AKGYKTRGMAHAMLGHWEEAVHDLHVASKI-----D-FDE-EIAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 185 ----~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l-----d-p~~-~~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
+.+|+++|.+|..+|++++|+..|++|+++ + |.. .+...+..+...+++..++..++++.
T Consensus 220 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 290 (383)
T 3ulq_A 220 PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKG 290 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 358999999999999999999999999994 4 444 33445556555556655555555443
No 140
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.02 E-value=9.4e-09 Score=96.92 Aligned_cols=122 Identities=12% Similarity=-0.017 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C------HHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S------AIMYATRASVYIKMKKPNAAIRDATAAL---EINPDSA 185 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~------a~~~~nra~a~~~l~~~~~Ai~d~~~Al---~l~p~~~ 185 (399)
..+..+...|..+...|+|++|+..|.+|+.+.+ . +.+|.++|.+|..+++|+.|+..|++|+ +..+++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~ 192 (293)
T 2qfc_A 113 QFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNE 192 (293)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccc
Confidence 3445566788899999999999999999998754 2 6799999999999999999999999999 5566643
Q ss_pred ----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc-------HHHHHHHHHHhHHHHhHHHH
Q 044737 186 ----KGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD-------EEIAAVLKKVEPNALRIEEH 237 (399)
Q Consensus 186 ----~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~-------~~~~~~lk~v~~~~~k~~e~ 237 (399)
.+|+++|.+|..+|+|++|+..|++++++.++ ..+...+..+...+++..++
T Consensus 193 ~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 193 EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred cchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 69999999999999999999999999998754 12334455555555544444
No 141
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.02 E-value=6.2e-10 Score=98.69 Aligned_cols=121 Identities=12% Similarity=-0.024 Sum_probs=97.5
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHH
Q 044737 126 MEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSA----------------KGY 188 (399)
Q Consensus 126 ~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~----------------~a~ 188 (399)
...-..++|++|.+.|.......+ .+..+.++|.+++..++|.+|+..|.+++.+.|.++ .+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (198)
T 2fbn_A 12 SGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCN 91 (198)
T ss_dssp ----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHH
Confidence 334456778888888877777767 788999999999999999999999999999999887 899
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 189 KTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 189 ~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+++|.+|..+++|++|+.+|+++++++|++ .+...+..+...+++..++...|++...
T Consensus 92 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 92 LNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 999999999999999999999999999987 5566777777777888777777766544
No 142
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.02 E-value=4.4e-09 Score=107.70 Aligned_cols=102 Identities=20% Similarity=0.144 Sum_probs=89.9
Q ss_pred HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q 044737 113 EKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI--- 180 (399)
Q Consensus 113 e~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l--- 180 (399)
+....+....+.+..+..+|+|++|+..|.+++.+ +| .+..+.|+|.+|..+|+|++|+..|.++|.+
T Consensus 304 ~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 304 EMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 33455667778888899999999999999999987 44 6899999999999999999999999999987
Q ss_pred -----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 181 -----NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 181 -----~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
+|+-+..|.++|.+|..+|+|++|+..|++|+++
T Consensus 384 ~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 384 LYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3444678999999999999999999999999976
No 143
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.01 E-value=4.5e-09 Score=101.60 Aligned_cols=116 Identities=15% Similarity=0.166 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S----AIMYATRASVYIKMKKPNAAIRDATAALEI------NPDSAK 186 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~----a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l------~p~~~~ 186 (399)
+..+...|..++..|+|++|+.+|++++.+.| + +.+|.++|.+|+.+++|+.|+..+++++.+ .|..+.
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 88 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 88 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 55788999999999999999999999999999 6 578999999999999999999999999988 455678
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH-------HHHHHHHHhHHHHh
Q 044737 187 GYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE-------IAAVLKKVEPNALR 233 (399)
Q Consensus 187 a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~-------~~~~lk~v~~~~~k 233 (399)
+|+.+|.+|..+|++++|+..|++++++.+... +...+..+....++
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999876531 23344445455555
No 144
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.01 E-value=3.3e-09 Score=85.26 Aligned_cols=84 Identities=20% Similarity=0.180 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
+..+...|..++..++|++|+..|.+++.++| +..+|.++|.+|..+++++.|+..+.++++++|++..+++.++.++.
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 125 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAEL 125 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 45678899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hcCCH
Q 044737 197 MLGHW 201 (399)
Q Consensus 197 ~lg~~ 201 (399)
.+|++
T Consensus 126 ~~~~~ 130 (131)
T 2vyi_A 126 KLREA 130 (131)
T ss_dssp HHTTC
T ss_pred HHhcC
Confidence 99876
No 145
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.01 E-value=3e-10 Score=110.47 Aligned_cols=100 Identities=13% Similarity=-0.004 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHh
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA-HAM 197 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a-~~~ 197 (399)
.+.++|..+++.++|++|+.+|+++|.++| +..+|+++|.+|+.+++|++|+.+|+++++++|++..++..++.+ ...
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999 999999999999999999999999999999999999999999988 445
Q ss_pred cCCHHHHHHHHHHHHhhCCcHH
Q 044737 198 LGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.+.++.+...|.+++.+.|++.
T Consensus 312 ~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 312 KALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHhhCCCCCCC
Confidence 6778889999999999999874
No 146
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.99 E-value=3.4e-09 Score=85.97 Aligned_cols=85 Identities=8% Similarity=-0.009 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
...+..+...|..++..|+|++|+..|.++++++| +..+|+++|.||..+|++++|+..+.+++.++|+++........
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~a 103 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQA 103 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45677899999999999999999999999999999 99999999999999999999999999999999999876654444
Q ss_pred HHHhcC
Q 044737 194 AHAMLG 199 (399)
Q Consensus 194 a~~~lg 199 (399)
+....+
T Consensus 104 i~~~~~ 109 (117)
T 3k9i_A 104 ILFYAD 109 (117)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 444333
No 147
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.99 E-value=4.5e-10 Score=114.54 Aligned_cols=101 Identities=18% Similarity=0.142 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA-- 194 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a-- 194 (399)
+..+..+|..+++.|+|++|+..|++|++++| ++.+|+++|.+|..+++|++|+..+++|++++|++..++..++.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~ 119 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 119 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHH-----------HHHhhCCcH
Q 044737 195 HAMLGHWEEAVHDLH-----------VASKIDFDE 218 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~-----------~Al~ldp~~ 218 (399)
+..+++|++|+..++ +++.++|+.
T Consensus 120 ~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 120 IVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 888999999999999 888888764
No 148
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.98 E-value=5.6e-09 Score=91.40 Aligned_cols=100 Identities=12% Similarity=-0.044 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCC---
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIML------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI---NPD--- 183 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l---~p~--- 183 (399)
.+..+...|..++..|+|++|+.+|.+++.+ .+ .+.++.++|.+|..+|++++|+..+.+++.+ .++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 4678889999999999999999999999994 34 7899999999999999999999999999998 443
Q ss_pred -CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 184 -SAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 184 -~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
.+.+++++|.++..+|++++|+..|++++.+..
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999998743
No 149
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.97 E-value=2.9e-09 Score=101.47 Aligned_cols=101 Identities=11% Similarity=0.009 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S------AIMYATRASVYIKMKKPNAAIRDATAALEINPDS---- 184 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~------a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---- 184 (399)
..+..+...|..+.. |+|++|+.+|.+|+.+.+ . +.+|.++|.+|..+|+|++|+..|++++.+.+.+
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 346778899999988 999999999999999976 3 6889999999999999999999999999986644
Q ss_pred --HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 185 --AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 185 --~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
..+|+.+|.++..+|++++|+..|++++ ++|+.
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 3588899999999999999999999999 99965
No 150
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.97 E-value=1.2e-08 Score=98.33 Aligned_cols=100 Identities=10% Similarity=0.028 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCC-CHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHHhCCCCHHHH
Q 044737 119 AEAKAKAMEAISEG--KLDEAIELSTEAIMLNP-SAIMYATRASVY----IKM---KKPNAAIRDATAALEINPDSAKGY 188 (399)
Q Consensus 119 ~~~k~~g~~~~~~g--~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~----~~l---~~~~~Ai~d~~~Al~l~p~~~~a~ 188 (399)
..|..++..+...+ ++++|+.++.++|.++| +..+|+.|+.++ ..+ +++.+++..|+++|+++|.+..+|
T Consensus 68 taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW 147 (306)
T 3dra_A 68 TIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVW 147 (306)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 34445555555555 55555555555555555 555555555555 444 455555555555555555555555
Q ss_pred HHHHHHHHhcCCHH--HHHHHHHHHHhhCCcH
Q 044737 189 KTRGMAHAMLGHWE--EAVHDLHVASKIDFDE 218 (399)
Q Consensus 189 ~~~g~a~~~lg~~e--eA~~~l~~Al~ldp~~ 218 (399)
+.|+.++..++.++ +++..+.+++++||.|
T Consensus 148 ~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 148 SYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 55555555555555 5555555555555554
No 151
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.96 E-value=2e-09 Score=105.03 Aligned_cols=126 Identities=15% Similarity=0.094 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIML------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPD-------SA 185 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~-------~~ 185 (399)
.+..+|..++..|+|++|+..|.+|+.+ .+ .+.+|.++|.+|..++++..|+..+.+|+++.+. .+
T Consensus 105 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 184 (383)
T 3ulq_A 105 FNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLL 184 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 4455999999999999999999999997 22 6899999999999999999999999999998433 35
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH-------HHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 186 KGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE-------IAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 186 ~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~-------~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
.++..+|.+|..+|+|++|+..|++|+++.+... +...+..+....++..++..+|++.-
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 6899999999999999999999999999865432 33445555555555566555554443
No 152
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.95 E-value=2.2e-09 Score=101.28 Aligned_cols=99 Identities=18% Similarity=0.087 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIML------NP--SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS---- 184 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l------~P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---- 184 (399)
.+..+...|..++..|+|++|+.+|.+|+.+ ++ .+.+|+|+|.+|.++++|++|+..+++|+++.+..
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 3456888999999999999999999999953 22 56788999999999999999999999999886443
Q ss_pred --HHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhC
Q 044737 185 --AKGYKTRGMAHAMLG-HWEEAVHDLHVASKID 215 (399)
Q Consensus 185 --~~a~~~~g~a~~~lg-~~eeA~~~l~~Al~ld 215 (399)
+.+|+++|.+|..+| .+++|+..|++|+.+.
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 788999999999999 4699999999998764
No 153
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.95 E-value=1.2e-08 Score=99.43 Aligned_cols=101 Identities=14% Similarity=-0.023 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCC
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLN-----P--SAIMYATRASVYIKMKKPNAAIRDATAALE-----INPD 183 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~-----P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~-----l~p~ 183 (399)
..+..+...|..++..|+|++|+..|.+|+.+. + .+.++.++|.+|..++++++|+..+.+|+. .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 456778899999999999999999999999973 2 478899999999999999999999999999 7888
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 184 SAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 184 ~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
.+.+++++|.+|..+|++++|+..|++++++.+
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999854
No 154
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.95 E-value=7.6e-09 Score=83.81 Aligned_cols=96 Identities=16% Similarity=0.124 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHh
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVE 228 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~ 228 (399)
....|.++|.+++..++|+.|+..+++++.++|++..+|+.+|.++..++++++|+..|+++++++|++ .+...+..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999999999999999999987 4555666666
Q ss_pred HHHHhHHHHHHHHHHHH
Q 044737 229 PNALRIEEHRRKYDRLR 245 (399)
Q Consensus 229 ~~~~k~~e~~~~ye~l~ 245 (399)
...++..++...+++..
T Consensus 95 ~~~~~~~~A~~~~~~~~ 111 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKAL 111 (133)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHH
Confidence 66666666666555443
No 155
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.93 E-value=1.1e-08 Score=88.99 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044737 135 DEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS--AKGYKTRGMAHAMLGHWEEAVHDLHVA 211 (399)
Q Consensus 135 ~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~--~~a~~~~g~a~~~lg~~eeA~~~l~~A 211 (399)
..|+..|.+++.++| +..+++++|.+|..+|++++|+..|.++++++|++ ..+|+.++.++..+|++++|+..|+++
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 346777888888899 99999999999999999999999999999999986 569999999999999999999999998
Q ss_pred Hh
Q 044737 212 SK 213 (399)
Q Consensus 212 l~ 213 (399)
+.
T Consensus 171 l~ 172 (176)
T 2r5s_A 171 LY 172 (176)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 156
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.93 E-value=7.3e-09 Score=100.08 Aligned_cols=130 Identities=11% Similarity=0.050 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S------AIMYATRASVYIKMKKPNAAIRDATAALEINPDS---- 184 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~------a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---- 184 (399)
..+..+...|..++..|+|++|+..|.+++.+.+ . +.+|.++|.+|..+|++++|+..+++++.+.+..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 3456788899999999999999999999999865 2 4599999999999999999999999999988766
Q ss_pred --HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-------HHHHHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 185 --AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-------EIAAVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 185 --~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-------~~~~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
+.+|+.+|.+|..+|++++|+..|++++++.+.. .+...+..+....++..++..+|++..
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 334 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHL 334 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 7899999999999999999999999999986542 123445555555566666666555443
No 157
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.93 E-value=5.5e-09 Score=103.02 Aligned_cols=91 Identities=15% Similarity=0.129 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
.+..+.++|..+++.++|++|+.+|++||+++| ++.+|+++|.+|..+++|++|+.+|++|++++|++..++..++.++
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~ 351 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVK 351 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 356677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHH
Q 044737 196 AMLGHWEEAVHD 207 (399)
Q Consensus 196 ~~lg~~eeA~~~ 207 (399)
..+++++++...
T Consensus 352 ~~~~~~~~a~k~ 363 (370)
T 1ihg_A 352 QKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 999988887653
No 158
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.92 E-value=5e-08 Score=90.20 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 044737 119 AEAKAKAMEAIS----EGKLDEAIELSTEAIMLNPSAIMYATRASVYIK----MKKPNAAIRDATAALEINPDSAKGYKT 190 (399)
Q Consensus 119 ~~~k~~g~~~~~----~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~----l~~~~~Ai~d~~~Al~l~p~~~~a~~~ 190 (399)
..+...|..++. .+++++|+.+|.+++.++ +..+++++|.+|.. .+++++|+..|+++++++ ++.++++
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~ 115 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCAS 115 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHH
Confidence 467788999999 999999999999999886 68889999999999 999999999999999984 8999999
Q ss_pred HHHHHHh----cCCHHHHHHHHHHHHhhCCcHHHHHHHHHHhHH----HHhHHHHHHHHHH
Q 044737 191 RGMAHAM----LGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPN----ALRIEEHRRKYDR 243 (399)
Q Consensus 191 ~g~a~~~----lg~~eeA~~~l~~Al~ldp~~~~~~~lk~v~~~----~~k~~e~~~~ye~ 243 (399)
+|.+|.. .+++++|+..|++++++++.. ....+..+... ..+..+...+|++
T Consensus 116 lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-a~~~lg~~~~~~~~~~~~~~~A~~~~~~ 175 (273)
T 1ouv_A 116 LGGIYHDGKVVTRDFKKAVEYFTKACDLNDGD-GCTILGSLYDAGRGTPKDLKKALASYDK 175 (273)
T ss_dssp HHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHcCCCcccCHHHHHHHHHHHHhcCcHH-HHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 9999999 999999999999999988443 33344444333 3444444444443
No 159
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.92 E-value=2.8e-08 Score=96.58 Aligned_cols=114 Identities=9% Similarity=-0.015 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEG--KLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKK-PNAAIRDATAALEINPDSAKGYKT 190 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g--~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~-~~~Ai~d~~~Al~l~p~~~~a~~~ 190 (399)
.+....|..++..+...+ .|++++.++.++|.++| +..+|+.|+.+...++. +++++..++++|+++|.+..||..
T Consensus 105 PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~ 184 (331)
T 3dss_A 105 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHY 184 (331)
T ss_dssp TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 344678899999999988 49999999999999999 99999999999999999 699999999999999999999999
Q ss_pred HHHHHHhc--------------CCHHHHHHHHHHHHhhCCcH-HHHHHHHHHh
Q 044737 191 RGMAHAML--------------GHWEEAVHDLHVASKIDFDE-EIAAVLKKVE 228 (399)
Q Consensus 191 ~g~a~~~l--------------g~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~ 228 (399)
|+.++..+ +.+++++.++.+++.++|+| .++..++.+.
T Consensus 185 R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll 237 (331)
T 3dss_A 185 RSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLL 237 (331)
T ss_dssp HHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999988 56899999999999999998 5566566554
No 160
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.92 E-value=1.8e-08 Score=79.53 Aligned_cols=93 Identities=17% Similarity=0.182 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhH
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEP 229 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~ 229 (399)
+..|..+|.+++..++|+.|+..+++++.++|+++.+|+.+|.++..+++|++|+..|+++++++|++ .+...+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999987 44455555555
Q ss_pred HHHhHHHHHHHHHH
Q 044737 230 NALRIEEHRRKYDR 243 (399)
Q Consensus 230 ~~~k~~e~~~~ye~ 243 (399)
..++..+....|+.
T Consensus 84 ~~~~~~~A~~~~~~ 97 (118)
T 1elw_A 84 FLNRFEEAKRTYEE 97 (118)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHH
Confidence 55555555444433
No 161
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.91 E-value=5.1e-09 Score=102.18 Aligned_cols=127 Identities=12% Similarity=0.037 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S------AIMYATRASVYIKMKKPNAAIRDATAALEINPDS----- 184 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~------a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~----- 184 (399)
.+..+...|..++..|+|++|+.+|.+++.+.+ . +.+|.++|.+|+.++++++|+..+++++.+.+..
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 301 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREV 301 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 455778899999999999999999999999876 2 4589999999999999999999999999998755
Q ss_pred -HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH-------HHHHHHHHhHHHHhHHHHHHHHHH
Q 044737 185 -AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE-------IAAVLKKVEPNALRIEEHRRKYDR 243 (399)
Q Consensus 185 -~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~-------~~~~lk~v~~~~~k~~e~~~~ye~ 243 (399)
..+|+.+|.+|..+|++++|+..|++++.+.+... +...+..+....++..++..+|++
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 368 (411)
T 4a1s_A 302 EAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQ 368 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 78999999999999999999999999999865431 233444444444455555444443
No 162
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.91 E-value=1.2e-08 Score=84.65 Aligned_cols=100 Identities=18% Similarity=0.160 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------C
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-------SAIMYATRASVYIKMKKPNAAIRDATAALEINP------D 183 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p------~ 183 (399)
.+..+...|..++..|+|++|+..|.+++.+.+ .+.++.++|.+|..++++++|+..+++++.+.+ .
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 127 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 127 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHh
Confidence 456788999999999999999999999999855 278899999999999999999999999998743 2
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 184 SAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 184 ~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
.+.++..+|.++..+|++++|+..|++++++..
T Consensus 128 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 128 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 257899999999999999999999999988753
No 163
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.90 E-value=8.8e-09 Score=96.00 Aligned_cols=103 Identities=13% Similarity=0.114 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-------SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS---- 184 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---- 184 (399)
..+..+...|..++..|+|++|+..|.+++.+.+ .+.++.++|.+|..++++++|+..+++++.+.+..
T Consensus 181 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 260 (338)
T 3ro2_A 181 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 260 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchh
Confidence 3456778899999999999999999999998855 35699999999999999999999999999987765
Q ss_pred --HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 185 --AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 185 --~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
..+++.+|.++..+|++++|+..|++++.+.+..
T Consensus 261 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 296 (338)
T 3ro2_A 261 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 296 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999987643
No 164
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.89 E-value=7.1e-09 Score=80.85 Aligned_cols=66 Identities=20% Similarity=0.298 Sum_probs=63.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 154 YATRASVYIKMKKPNAAIRDATAALEINPDSAK-GYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 154 ~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~-a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.+++|.+++..++|.+|+..|+++++++|+++. +|+.+|.+|..+|++++|+..|+++++++|++.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 367899999999999999999999999999999 999999999999999999999999999999984
No 165
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.89 E-value=2e-08 Score=94.68 Aligned_cols=100 Identities=12% Similarity=-0.008 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCC
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP---S----AIMYATRASVYIKMKKPNAAIRDATAALEI-------NPD 183 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P---~----a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l-------~p~ 183 (399)
+.-+...|..++..++|++|+..|.+|+.+.+ + +.+|.++|.+|..+++|+.|+..|++|+++ .+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 44555689999999999999999999999754 2 558999999999999999999999999953 233
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 184 SAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 184 ~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
.+.+|+++|.+|..+|+|++|+..|++|+++.+.
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999998754
No 166
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.89 E-value=6.2e-08 Score=94.14 Aligned_cols=114 Identities=11% Similarity=0.031 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHhCCCC
Q 044737 118 AAEAKAKAMEAISEGK----------LDEAIELSTEAIMLNP-SAIMYATRASVYIKMKK--PNAAIRDATAALEINPDS 184 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~----------~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~--~~~Ai~d~~~Al~l~p~~ 184 (399)
...|..++..+...++ +.+++.++..+|..+| +..+|+.|+.++..++. |++++..|+++|+++|.+
T Consensus 64 ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN 143 (331)
T 3dss_A 64 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN 143 (331)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC
Confidence 4466667766665554 7899999999999999 99999999999999994 899999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHH
Q 044737 185 AKGYKTRGMAHAMLGH-WEEAVHDLHVASKIDFDE-EIAAVLKKVEPNA 231 (399)
Q Consensus 185 ~~a~~~~g~a~~~lg~-~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~ 231 (399)
..||..|+.++..++. +++++.++.++++++|.| .++.....+...+
T Consensus 144 y~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 144 FHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999 699999999999999998 5566555555444
No 167
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.89 E-value=1.4e-08 Score=101.06 Aligned_cols=102 Identities=19% Similarity=0.129 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHc-------------------CCHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKM-------------------KKPNAAIRDATAA 177 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l-------------------~~~~~Ai~d~~~A 177 (399)
...+...|..+...|++++|+..|.+|++++| ++.+|.++|.+|... ..++.|+..+.++
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 326 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKA 326 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45577889999999999999999999999999 999999999998643 3467899999999
Q ss_pred HHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 178 LEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 178 l~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
++++|.++.+|+.+|.+|..+|+|++|+..|++++++++++.
T Consensus 327 ~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 327 DEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred hhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999999999999999998764
No 168
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=2.2e-08 Score=82.83 Aligned_cols=99 Identities=15% Similarity=0.095 Sum_probs=85.2
Q ss_pred hCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHH
Q 044737 147 LNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS---AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIA 221 (399)
Q Consensus 147 l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~ 221 (399)
.+| .+..+..+|.+++..++|..|+..++++++++|++ ..+|+++|.+|..+++|++|+..|+++++++|++ .+.
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 456 89999999999999999999999999999999998 8999999999999999999999999999999987 445
Q ss_pred HHHHHHhHHHHhHHHHHHHHHHHH
Q 044737 222 AVLKKVEPNALRIEEHRRKYDRLR 245 (399)
Q Consensus 222 ~~lk~v~~~~~k~~e~~~~ye~l~ 245 (399)
..+..+....++..+....|++..
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al 126 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCV 126 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 566666666666666666655443
No 169
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.88 E-value=1.7e-08 Score=98.40 Aligned_cols=99 Identities=18% Similarity=0.018 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP--------SAIMYATRASVYIKMKKPNAAIRDATAALEINP---- 182 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P--------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p---- 182 (399)
...+..+...|..++..|++..|+.+|.+|+.+.+ .+.++.++|.+|..+++|+.|+..+.+|+++.+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN 217 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Confidence 34566677777777777777777777777776532 255667777777777777777777777777532
Q ss_pred --CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 044737 183 --DSAKGYKTRGMAHAMLGHWEEAVHDLHVASK 213 (399)
Q Consensus 183 --~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ 213 (399)
..+.+|+++|.+|..+|++++|+..|++++.
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 1245677777777777777777777777777
No 170
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.87 E-value=2.3e-08 Score=96.26 Aligned_cols=115 Identities=6% Similarity=-0.041 Sum_probs=102.7
Q ss_pred HHHHHHHHHHH----HHc---CCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHH
Q 044737 118 AAEAKAKAMEA----ISE---GKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPN--AAIRDATAALEINPDSAKG 187 (399)
Q Consensus 118 a~~~k~~g~~~----~~~---g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~--~Ai~d~~~Al~l~p~~~~a 187 (399)
...|..++..+ ... +++.+++.++.++|.++| +..+|+.|+.++.+++.++ +++..|+++|+++|.+..|
T Consensus 103 y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sA 182 (306)
T 3dra_A 103 YQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSA 182 (306)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHH
Confidence 34677787777 666 799999999999999999 9999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHhcCC------HHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHH
Q 044737 188 YKTRGMAHAMLGH------WEEAVHDLHVASKIDFDE-EIAAVLKKVEPNAL 232 (399)
Q Consensus 188 ~~~~g~a~~~lg~------~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~ 232 (399)
|..|+.++..++. +++++..+.+++.++|+| .++..+..+.....
T Consensus 183 W~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~ 234 (306)
T 3dra_A 183 WSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFD 234 (306)
T ss_dssp HHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcC
Confidence 9999999999998 999999999999999998 56666666654433
No 171
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.87 E-value=1.8e-08 Score=94.95 Aligned_cols=95 Identities=19% Similarity=0.105 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHh
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVE 228 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~ 228 (399)
++..+.++|.+|+..|+|.+|+..|+++|.++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++ .+...+..+.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999998 5566677777
Q ss_pred HHHHhHHHHHHHHHHH
Q 044737 229 PNALRIEEHRRKYDRL 244 (399)
Q Consensus 229 ~~~~k~~e~~~~ye~l 244 (399)
..+++..++...|++.
T Consensus 83 ~~~g~~~~A~~~~~~a 98 (281)
T 2c2l_A 83 LEMESYDEAIANLQRA 98 (281)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHH
Confidence 6777777766666554
No 172
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.86 E-value=4.6e-08 Score=77.74 Aligned_cols=97 Identities=23% Similarity=0.283 Sum_probs=79.5
Q ss_pred hCC-C-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHH
Q 044737 147 LNP-S-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAV 223 (399)
Q Consensus 147 l~P-~-a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~ 223 (399)
++| . +.+|.++|.+|...++++.|+..+.+++.++|++..+|+.+|.++...|++++|+..|+++++++|++ .....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 82 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYN 82 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHH
Confidence 456 4 78899999999999999999999999999999999999999999999999999999999999999987 34445
Q ss_pred HHHHhHHHHhHHHHHHHHHH
Q 044737 224 LKKVEPNALRIEEHRRKYDR 243 (399)
Q Consensus 224 lk~v~~~~~k~~e~~~~ye~ 243 (399)
+..+....++..+....+++
T Consensus 83 la~~~~~~~~~~~A~~~~~~ 102 (125)
T 1na0_A 83 LGNAYYKQGDYDEAIEYYQK 102 (125)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHH
Confidence 55555555555555555443
No 173
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.85 E-value=1.3e-07 Score=88.94 Aligned_cols=104 Identities=10% Similarity=-0.054 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S------AIMYATRASVYIKMKKPNAAIRDATAALEINPDS--- 184 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~------a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~--- 184 (399)
......+...+..++..++|++|+..|.+++...+ . ..+++.+|.+|...++|++|+..+.+|+.+.+..
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 151 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch
Confidence 45567788899999999999999999999999877 3 2556788999999999999999999999876544
Q ss_pred ---HHHHHHHHHHHHhcCCHHHHHHHHHHHH---hhCCcH
Q 044737 185 ---AKGYKTRGMAHAMLGHWEEAVHDLHVAS---KIDFDE 218 (399)
Q Consensus 185 ---~~a~~~~g~a~~~lg~~eeA~~~l~~Al---~ldp~~ 218 (399)
..+|+.+|.+|..+|+|++|+..|++|+ +..+++
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~ 191 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN 191 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc
Confidence 6799999999999999999999999999 445543
No 174
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.85 E-value=9e-09 Score=81.44 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPD 183 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~ 183 (399)
.+..+...|..++..|+|++|+..|.++++++| +..+|.++|.+|..+|++++|+..|++++++.|.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 356789999999999999999999999999999 9999999999999999999999999999998764
No 175
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.84 E-value=8.4e-08 Score=93.80 Aligned_cols=106 Identities=16% Similarity=0.112 Sum_probs=92.9
Q ss_pred HHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc-C-CHHHH
Q 044737 129 ISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMK-KPNAAIRDATAALEINPDSAKGYKTRGMAHAML-G-HWEEA 204 (399)
Q Consensus 129 ~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~-~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~l-g-~~eeA 204 (399)
.+....++|+.+++++|.++| +..+|+.|+.++..++ .+++++..++++|.++|++..+|+.|+.++..+ + +++++
T Consensus 65 ~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~E 144 (349)
T 3q7a_A 65 AKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSE 144 (349)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHH
T ss_pred HhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHH
Confidence 344455789999999999999 9999999999999999 599999999999999999999999999999998 8 99999
Q ss_pred HHHHHHHHhhCCcH-HHHHHHHHHhHHHHhH
Q 044737 205 VHDLHVASKIDFDE-EIAAVLKKVEPNALRI 234 (399)
Q Consensus 205 ~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~ 234 (399)
+..+.++++++|.| .++.....+...+...
T Consensus 145 L~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~ 175 (349)
T 3q7a_A 145 IEYIHGSLLPDPKNYHTWAYLHWLYSHFSTL 175 (349)
T ss_dssp HHHHHHHTSSCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhccc
Confidence 99999999999998 5565555555554443
No 176
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.84 E-value=7e-09 Score=90.02 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcC-----------CHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKL----------DEAIELSTEAIMLNP-SAIMYATRASVYIKMK-----------KPNAAIRD 173 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~----------~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~-----------~~~~Ai~d 173 (399)
..++.|.+.|.++...+++ ++||..|++||+++| ++.+|+++|.+|..++ +|++|+..
T Consensus 34 ~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~ 113 (158)
T 1zu2_A 34 LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQF 113 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHH
Confidence 3466888899999988775 599999999999999 9999999999999985 89999999
Q ss_pred HHHHHHhCCCCH
Q 044737 174 ATAALEINPDSA 185 (399)
Q Consensus 174 ~~~Al~l~p~~~ 185 (399)
|++||+++|++.
T Consensus 114 ~~kAl~l~P~~~ 125 (158)
T 1zu2_A 114 FQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHCTTCH
T ss_pred HHHHHHhCCCCH
Confidence 999999999985
No 177
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.83 E-value=2.5e-08 Score=94.66 Aligned_cols=98 Identities=15% Similarity=-0.036 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP---SAIMYATRASVYIKMKKPNAAIRDATAALEIN--PD-SAKGYKTRGM 193 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P---~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~--p~-~~~a~~~~g~ 193 (399)
..+.+|..+++.++|++|+..|++++...+ ...+++++|.++..+|++.+|+..|++++... |. .+.+++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 556777777788888888888777666532 24577777888888888888888888777544 44 5567778888
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
++..+|+.++|...|++++.++|+
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc
Confidence 888888888888888888888777
No 178
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.82 E-value=5e-08 Score=79.14 Aligned_cols=95 Identities=12% Similarity=-0.060 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH----HHHHHH
Q 044737 152 IMYATRASVYIKMKKPNAAIRDATAALEINPDSA---KGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE----EIAAVL 224 (399)
Q Consensus 152 ~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~---~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~----~~~~~l 224 (399)
..++++|.+++..++|++|+..|+++++.+|++. .+|+.+|.++..+|+|++|+..|+++++++|++ .+...+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3578899999999999999999999999999998 899999999999999999999999999999986 234566
Q ss_pred HHHhHHHHhHHHHHHHHHHHHH
Q 044737 225 KKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 225 k~v~~~~~k~~e~~~~ye~l~~ 246 (399)
..+....++..++...|+.+-.
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 6666667777777777665544
No 179
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.80 E-value=3.8e-08 Score=84.64 Aligned_cols=87 Identities=10% Similarity=-0.053 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHhcCCHHHHHHH
Q 044737 134 LDEAIELSTEAIMLNP-SAIMYATRASVYIKMK---KPNAAIRDATAALEIN-P-DSAKGYKTRGMAHAMLGHWEEAVHD 207 (399)
Q Consensus 134 ~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~---~~~~Ai~d~~~Al~l~-p-~~~~a~~~~g~a~~~lg~~eeA~~~ 207 (399)
...+.+.|.+.+..++ +..+.+++|.|+.+.. +..++|..++.+++.+ | +..+++|++|.+|+++++|++|+.+
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y 93 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKY 93 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHH
Confidence 3556778888888889 9999999999999998 6679999999999999 7 6789999999999999999999999
Q ss_pred HHHHHhhCCcHHH
Q 044737 208 LHVASKIDFDEEI 220 (399)
Q Consensus 208 l~~Al~ldp~~~~ 220 (399)
++++++++|+|..
T Consensus 94 ~~~lL~ieP~n~Q 106 (152)
T 1pc2_A 94 VRGLLQTEPQNNQ 106 (152)
T ss_dssp HHHHHHHCTTCHH
T ss_pred HHHHHhcCCCCHH
Confidence 9999999999853
No 180
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.80 E-value=3.4e-08 Score=86.29 Aligned_cols=101 Identities=18% Similarity=0.080 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC-
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIML------NP--SAIMYATRASVYIKMKKPNAAIRDATAALEINP--DS- 184 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l------~P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p--~~- 184 (399)
..+..+...|..++..|+|++|+..|.+++.+ ++ .+.++.++|.+|..+|++++|+..+++++.+.+ .+
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 143 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQ 143 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccch
Confidence 45678899999999999999999999999998 44 467899999999999999999999999997632 12
Q ss_pred ---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 185 ---AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 185 ---~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
+.++..+|.++..+|++++|+..|++++++..
T Consensus 144 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 144 VAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 34678999999999999999999999998754
No 181
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.79 E-value=2.2e-08 Score=94.67 Aligned_cols=85 Identities=13% Similarity=0.064 Sum_probs=75.2
Q ss_pred HHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHhcCCHHHHH
Q 044737 129 ISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS--AKGYKTRGMAHAMLGHWEEAV 205 (399)
Q Consensus 129 ~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~--~~a~~~~g~a~~~lg~~eeA~ 205 (399)
...+++..|+..|.+++.++| +..+++++|.+|...|++++|+..|.++++++|++ ..++.+++.++..+|++++|+
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~ 275 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALA 275 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHH
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHH
Confidence 333334445566777788899 99999999999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHHHh
Q 044737 206 HDLHVASK 213 (399)
Q Consensus 206 ~~l~~Al~ 213 (399)
..|++++.
T Consensus 276 ~~~r~al~ 283 (287)
T 3qou_A 276 SXYRRQLY 283 (287)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 182
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.79 E-value=5e-08 Score=78.37 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=80.2
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH--------HHH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE--------EIA 221 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~--------~~~ 221 (399)
.+..|..+|.+++..++|+.|+..+.+++.++|+++.+|+.+|.++..+|+|++|+..|++++.++|++ .+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 357789999999999999999999999999999999999999999999999999999999999998764 233
Q ss_pred HHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 222 AVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 222 ~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
..+..+....++..++...|+....
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4455555555666666666555433
No 183
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.77 E-value=6.3e-08 Score=94.68 Aligned_cols=114 Identities=11% Similarity=0.020 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEG-KLDEAIELSTEAIMLNP-SAIMYATRASVYIKM-K-KPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 118 a~~~k~~g~~~~~~g-~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l-~-~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
...|..++..+...+ .+++++.+++++|.++| +..+|+.|+.++..+ + ++.+++..|+++|+++|.+..+|+.|+.
T Consensus 88 ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~w 167 (349)
T 3q7a_A 88 YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHW 167 (349)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 456789999999999 59999999999999999 999999999999998 8 9999999999999999999999999999
Q ss_pred HHHhcCCHH--------HHHHHHHHHHhhCCcH-HHHHHHHHHhHHH
Q 044737 194 AHAMLGHWE--------EAVHDLHVASKIDFDE-EIAAVLKKVEPNA 231 (399)
Q Consensus 194 a~~~lg~~e--------eA~~~l~~Al~ldp~~-~~~~~lk~v~~~~ 231 (399)
++..++.++ +++..+.++++++|.| .++.....+...+
T Consensus 168 vl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l 214 (349)
T 3q7a_A 168 LYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSR 214 (349)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTS
T ss_pred HHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 999999988 9999999999999988 5555555554433
No 184
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.76 E-value=1.2e-07 Score=85.37 Aligned_cols=97 Identities=18% Similarity=0.020 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMK----KPNAAIRDATAALEINPDSAKGYKTRG 192 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~----~~~~Ai~d~~~Al~l~p~~~~a~~~~g 192 (399)
.+..+...|..++..+++++|+.+|++|+... ++.+++++|.+|.. + ++.+|+.+|.+|++ +.++.+++++|
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g-~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg 92 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG-DGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLA 92 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT-CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHH
Confidence 35788899999999999999999999998754 78889999999988 7 89999999999965 57899999999
Q ss_pred HHHHh----cCCHHHHHHHHHHHHhhCCc
Q 044737 193 MAHAM----LGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 193 ~a~~~----lg~~eeA~~~l~~Al~ldp~ 217 (399)
.+|.. .+++++|+..|++++++.+.
T Consensus 93 ~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 121 (212)
T 3rjv_A 93 RVLVNRQAGATDVAHAITLLQDAARDSES 121 (212)
T ss_dssp HHHTCGGGSSCCHHHHHHHHHHHTSSTTS
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHHcCCC
Confidence 99998 89999999999999999984
No 185
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.72 E-value=6.9e-08 Score=77.50 Aligned_cols=78 Identities=9% Similarity=0.004 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPD--SAKGYKTRGMA 194 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~--~~~a~~~~g~a 194 (399)
+..+...|..++..|+|++|+..|.+++.++| +..+|+++|.+|..+|++++|+..|++++.++|. +..++..+..+
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~ 98 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVF 98 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 35788999999999999999999999999999 9999999999999999999999999999999874 33444444333
Q ss_pred H
Q 044737 195 H 195 (399)
Q Consensus 195 ~ 195 (399)
+
T Consensus 99 l 99 (115)
T 2kat_A 99 L 99 (115)
T ss_dssp H
T ss_pred H
Confidence 3
No 186
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.72 E-value=5.5e-08 Score=98.04 Aligned_cols=99 Identities=15% Similarity=0.019 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI------- 180 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l------- 180 (399)
.+.............|+|++|+..|.+++.+ +| .+..+.|+|.+|..+|+|++|+..|.++|.+
T Consensus 297 ~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~ 376 (433)
T 3qww_A 297 YARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPV 376 (433)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCC
Confidence 3445555566666778999999999999986 34 6889999999999999999999999999986
Q ss_pred -CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 044737 181 -NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKID 215 (399)
Q Consensus 181 -~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ld 215 (399)
+|+-+..|+++|.+|..+|+|++|+..|++|+++-
T Consensus 377 ~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 377 YSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 34456789999999999999999999999999863
No 187
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.71 E-value=2.4e-07 Score=90.82 Aligned_cols=109 Identities=18% Similarity=0.141 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCC-CHHHHHHHHHHHH-------------------------------
Q 044737 118 AAEAKAKAMEAISEGK---LDEAIELSTEAIMLNP-SAIMYATRASVYI------------------------------- 162 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~---~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~------------------------------- 162 (399)
|-.+..+|..++..++ +.+|+.+|++||+++| ++.+|..++.||+
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 4567778888887654 5899999999999999 8888876665552
Q ss_pred -------------HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHHHHHHHHHH
Q 044737 163 -------------KMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKV 227 (399)
Q Consensus 163 -------------~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~~~~~lk~v 227 (399)
..|++++|+..+++||.++|+ ..+|..+|.++...|++++|+..|.+|+.++|......+.+.+
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~l 352 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENG 352 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhCc
Confidence 357777888888888888764 5677777888888888888888888888888877655544443
No 188
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.68 E-value=2.1e-07 Score=74.50 Aligned_cols=75 Identities=11% Similarity=0.023 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------C-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLN-------P-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYK 189 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~-------P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~ 189 (399)
+..+...|..++..++|..|+..|.+|++.. + ...+|.++|.||+++|++..|+..++++++++|++..++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4577889999999999999999999999863 2 5788889999999999999999999999999999988877
Q ss_pred HHH
Q 044737 190 TRG 192 (399)
Q Consensus 190 ~~g 192 (399)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 776
No 189
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.68 E-value=1.7e-07 Score=73.93 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=67.0
Q ss_pred CC-CHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 148 NP-SAIMYATRASVYIKMKK---PNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 148 ~P-~a~~~~nra~a~~~l~~---~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+| ++.++..+|.+++..++ ..+|...+.+||+++|+++.+++.+|.+++..|+|++|+..|+++++.+|.+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 57 89999999999987766 7999999999999999999999999999999999999999999999999984
No 190
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.68 E-value=1.4e-07 Score=84.87 Aligned_cols=108 Identities=14% Similarity=-0.035 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CCHH
Q 044737 118 AAEAKAKAMEAISEG----KLDEAIELSTEAIMLNP-SAIMYATRASVYIK----MKKPNAAIRDATAALEINP--DSAK 186 (399)
Q Consensus 118 a~~~k~~g~~~~~~g----~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~----l~~~~~Ai~d~~~Al~l~p--~~~~ 186 (399)
+..+...|..++. + ++++|+.+|.+|+. + ++.+++++|.+|.. .+++.+|+..+.+|+++.+ .++.
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~ 126 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVD 126 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHH
Confidence 4567788888887 6 89999999999954 5 78899999999988 8899999999999999988 4599
Q ss_pred HHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCcHHHHHHHHHHh
Q 044737 187 GYKTRGMAHAM----LGHWEEAVHDLHVASKIDFDEEIAAVLKKVE 228 (399)
Q Consensus 187 a~~~~g~a~~~----lg~~eeA~~~l~~Al~ldp~~~~~~~lk~v~ 228 (399)
+++++|.+|.. .+++++|+..|++|+++..+......|..+.
T Consensus 127 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~a~~~Lg~~y 172 (212)
T 3rjv_A 127 AQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGMMF 172 (212)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999999999 8899999999999999833333444454443
No 191
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.67 E-value=1.7e-07 Score=95.67 Aligned_cols=126 Identities=12% Similarity=-0.036 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SA-IMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA- 194 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a-~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a- 194 (399)
+..+...|..+.+.|++++|+..|.++|.++| +. .+|.+++.++.+++++++|+..|.+|++..|.....|...+.+
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~ 400 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 400 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHH
Confidence 34555666677777777777777777777777 64 5777777777777777777777777777777666666655544
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhHHHHhHHHHHHHHHH
Q 044737 195 HAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEPNALRIEEHRRKYDR 243 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~~~~k~~e~~~~ye~ 243 (399)
+...|++++|...|+++++++|++ .++..+..+....+++.+.+..|++
T Consensus 401 ~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~ 450 (530)
T 2ooe_A 401 YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFER 450 (530)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHH
Confidence 335777777777777777777765 3444444444444444444444443
No 192
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.66 E-value=2.2e-07 Score=93.49 Aligned_cols=100 Identities=17% Similarity=0.157 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI----- 180 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l----- 180 (399)
+..+.........+.++|+|++|+..|.+++.+ +| .+..+.|+|.+|..+|+|++|+..|.++|.+
T Consensus 284 ~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~l 363 (429)
T 3qwp_A 284 WKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFF 363 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHc
Confidence 444566667777888999999999999999976 33 5889999999999999999999999999986
Q ss_pred ---CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 181 ---NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 181 ---~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
+|+-+..|+++|.+|..+|+|++|+..|++|+++
T Consensus 364 g~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 364 PGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3444668999999999999999999999999876
No 193
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.66 E-value=1.1e-07 Score=90.28 Aligned_cols=126 Identities=17% Similarity=0.072 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS--AKGYKTRGMAHA 196 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~--~~a~~~~g~a~~ 196 (399)
-....+..+...|+|++|++.|..++...| .. .++.+|.++++.++|.+|+..+++++...+.. ..+++++|.++.
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~ 182 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA 182 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH
Confidence 445668889999999999999999999999 77 99999999999999999999999888764222 458999999999
Q ss_pred hcCCHHHHHHHHHHHHhhC--Cc-H-HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKID--FD-E-EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ld--p~-~-~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
.+|++++|+..|++++... |. . .+...+..+...+++..+++..|+++..
T Consensus 183 ~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a 236 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQT 236 (282)
T ss_dssp HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 9999999999999998655 54 3 3445566666667776666666555443
No 194
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.61 E-value=4.9e-07 Score=87.28 Aligned_cols=128 Identities=11% Similarity=0.075 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-------SAIMYATRASVYIKMKKPNAAIRDATAALEIN-------- 181 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~-------- 181 (399)
.+..+...|..++..|+|++|+..|.+++.+.+ ...++.++|.+|..+|+|.+|+..|++++.+.
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~ 131 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL 131 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC
Confidence 456778899999999999999999999999865 24557899999999999999999999999875
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH------HHHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 182 PDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE------EIAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 182 p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~------~~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
|....++..+|.++..+|++++|...|++++.+.+.. .....+..+....++..+....++..
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a 200 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRL 200 (373)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3456788889999999999999999999999987742 22334555555555555555555443
No 195
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.59 E-value=5.9e-07 Score=91.73 Aligned_cols=110 Identities=10% Similarity=-0.006 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhCC-CHHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHhc
Q 044737 135 DEAIELSTEAIMLNP-SAIMYATRASVYIK-------MKKPN-------AAIRDATAALE-INPDSAKGYKTRGMAHAML 198 (399)
Q Consensus 135 ~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~-------l~~~~-------~Ai~d~~~Al~-l~p~~~~a~~~~g~a~~~l 198 (399)
..|+..|.+||..+| +..+|.++|..+.. +|+++ +|+..|++|++ ++|++..+|+.++.++..+
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 478889999999999 99999999998886 68876 88999999997 7899999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCcHH--HHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 199 GHWEEAVHDLHVASKIDFDEE--IAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 199 g~~eeA~~~l~~Al~ldp~~~--~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
|++++|...|+++++++|.+. ++..+..+....+.+.+++..|++.
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~A 382 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 382 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 999999999999999988763 4555555555566666666665554
No 196
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.51 E-value=1.7e-06 Score=83.41 Aligned_cols=129 Identities=13% Similarity=0.004 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP--SA----IMYATRASVYIKMKKPNAAIRDATAALEINPDS---- 184 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P--~a----~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~---- 184 (399)
...+..+..+|..++..|++++|+..+.+++...| .. .++.++|.+|...|+++.|+..+.+++.+.+..
T Consensus 11 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 90 (373)
T 1hz4_A 11 TMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWH 90 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHH
Confidence 34466778899999999999999999999999988 32 378899999999999999999999999986543
Q ss_pred --HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC--------cH-HHHHHHHHHhHHHHhHHHHHHHHHH
Q 044737 185 --AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF--------DE-EIAAVLKKVEPNALRIEEHRRKYDR 243 (399)
Q Consensus 185 --~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp--------~~-~~~~~lk~v~~~~~k~~e~~~~ye~ 243 (399)
..+++.+|.++..+|+|++|+..|++++++.+ .. .....+..+....+++.+....+++
T Consensus 91 ~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 160 (373)
T 1hz4_A 91 YALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARS 160 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 24578899999999999999999999998763 22 2233455555555555555555544
No 197
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.42 E-value=2.9e-06 Score=67.67 Aligned_cols=70 Identities=13% Similarity=-0.081 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEIN-------PDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~-------p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
++.-++.+|..++..++|..|+.++.+|+++. ...+..|..+|.+++.+|+++.|+..++++++++|++.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 45677899999999999999999999999973 35688999999999999999999999999999999985
No 198
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.41 E-value=6.4e-07 Score=91.63 Aligned_cols=102 Identities=9% Similarity=-0.066 Sum_probs=88.3
Q ss_pred HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q 044737 113 EKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI--- 180 (399)
Q Consensus 113 e~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l--- 180 (399)
+....+..+.+.|..|...|+|++|+.+|.++|.+ +| .+..|.|+|.+|..+|+|++|+..|.+|+++
T Consensus 346 ~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 346 TNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 44566777889999999999999999999999986 45 7899999999999999999999999999986
Q ss_pred --CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 181 --NPDS---AKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 181 --~p~~---~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
-|++ ...+..++.++..++.|.+|...|+++.+-
T Consensus 426 ~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 426 THGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3554 566778899999999999999999887543
No 199
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.38 E-value=2.3e-06 Score=81.03 Aligned_cols=85 Identities=14% Similarity=0.039 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhCC---CHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHhc-CCHHH
Q 044737 134 LDEAIELSTEAIMLNP---SAIMYATRASVYIKM-----KKPNAAIRDATAALEINPDS-AKGYKTRGMAHAML-GHWEE 203 (399)
Q Consensus 134 ~~~Ai~~y~~Ai~l~P---~a~~~~nra~a~~~l-----~~~~~Ai~d~~~Al~l~p~~-~~a~~~~g~a~~~l-g~~ee 203 (399)
...|...+.+||+++| +..+|..+|..|.++ |+.+.|..+|++||+++|+. ...++..|..++.. +++++
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 5789999999999999 577999999999996 99999999999999999975 99999999999884 99999
Q ss_pred HHHHHHHHHhhCCcH
Q 044737 204 AVHDLHVASKIDFDE 218 (399)
Q Consensus 204 A~~~l~~Al~ldp~~ 218 (399)
|...+++|+..+|..
T Consensus 259 a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 259 FDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999999873
No 200
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.34 E-value=7.3e-06 Score=68.70 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=80.7
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh--
Q 044737 124 KAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIK----MKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM-- 197 (399)
Q Consensus 124 ~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~----l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~-- 197 (399)
.|..++....+++|+.+|.+|.+.. ++.+++++|.+|.. .+++.+|+.++++|++. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~ 107 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGK 107 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCC
Confidence 6677777788889999999998864 67888999999998 88999999999999987 689999999999998
Q ss_pred --cCCHHHHHHHHHHHHhhCCcH
Q 044737 198 --LGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 198 --lg~~eeA~~~l~~Al~ldp~~ 218 (399)
.+++++|+..|++|.++....
T Consensus 108 g~~~d~~~A~~~~~~Aa~~g~~~ 130 (138)
T 1klx_A 108 GVVKNEKQAVKTFEKACRLGSED 130 (138)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCHH
Confidence 899999999999999986544
No 201
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.30 E-value=1.8e-05 Score=79.73 Aligned_cols=93 Identities=14% Similarity=-0.002 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHH
Q 044737 120 EAKAKAMEAISE-----GKLDEAIELSTEAIMLNPSAIMYATRASVYIKMK---KPNAAIRDATAALEINPDSAKGYKTR 191 (399)
Q Consensus 120 ~~k~~g~~~~~~-----g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~---~~~~Ai~d~~~Al~l~p~~~~a~~~~ 191 (399)
.+...|..+... +++++|+.+|.++++.. +..+++++|.+|...+ ++++|+.+|.++++. .++.+++++
T Consensus 293 a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~L 369 (490)
T 2xm6_A 293 GQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQG-DATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNL 369 (490)
T ss_dssp HHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHH
Confidence 344556666655 66777777777666544 3445666666666644 566677777777665 456677777
Q ss_pred HHHHHh----cCCHHHHHHHHHHHHhhC
Q 044737 192 GMAHAM----LGHWEEAVHDLHVASKID 215 (399)
Q Consensus 192 g~a~~~----lg~~eeA~~~l~~Al~ld 215 (399)
|.+|.. .+++++|+..|++|++..
T Consensus 370 g~~y~~g~g~~~~~~~A~~~~~~A~~~~ 397 (490)
T 2xm6_A 370 GNALLQGKGVKKDEQQAAIWMRKAAEQG 397 (490)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHhCC
Confidence 777766 667777777777776654
No 202
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.30 E-value=4.9e-06 Score=69.04 Aligned_cols=95 Identities=11% Similarity=-0.016 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHhcCCHHHHH
Q 044737 132 GKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNA---AIRDATAALEIN-P-DSAKGYKTRGMAHAMLGHWEEAV 205 (399)
Q Consensus 132 g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~---Ai~d~~~Al~l~-p-~~~~a~~~~g~a~~~lg~~eeA~ 205 (399)
.....+...|.+++..++ +....+++|.|+++..+... +|..++..++.+ | ....++|.+|.+|+++|+|..|.
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 345667788888888888 99999999999999988766 999999998887 5 56789999999999999999999
Q ss_pred HHHHHHHhhCCcHHHHHHHHH
Q 044737 206 HDLHVASKIDFDEEIAAVLKK 226 (399)
Q Consensus 206 ~~l~~Al~ldp~~~~~~~lk~ 226 (399)
.+++.+|+++|+|.....|+.
T Consensus 95 ~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 95 KYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHH
Confidence 999999999999954444433
No 203
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.27 E-value=7.2e-06 Score=82.50 Aligned_cols=104 Identities=13% Similarity=0.029 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 044737 120 EAKAKAMEAISEG---KLDEAIELSTEAIMLNP-SAIMYATRASVYIKM----KKPNAAIRDATAALEINPDSAKGYKTR 191 (399)
Q Consensus 120 ~~k~~g~~~~~~g---~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l----~~~~~Ai~d~~~Al~l~p~~~~a~~~~ 191 (399)
.+...|..+...| ++.+|+..|.+++...+ .+..++++|.+|... +++.+|+..|.+++ |.++.+++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 5678888999999 99999999999999999 999999999999766 79999999999998 8999999999
Q ss_pred HHH-H--HhcCCHHHHHHHHHHHHhhCCcHHHHHHHHHH
Q 044737 192 GMA-H--AMLGHWEEAVHDLHVASKIDFDEEIAAVLKKV 227 (399)
Q Consensus 192 g~a-~--~~lg~~eeA~~~l~~Al~ldp~~~~~~~lk~v 227 (399)
|.+ + ...+++++|+..|+++++.... .....|..+
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~g~~-~A~~~Lg~~ 292 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAADQP-RAELLLGKL 292 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHTTCH-HHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHCCCH-HHHHHHHHH
Confidence 998 5 5789999999999999987633 333344443
No 204
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.22 E-value=4.2e-05 Score=77.07 Aligned_cols=122 Identities=10% Similarity=-0.022 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHH
Q 044737 118 AAEAKAKAMEAIS----EGKLDEAIELSTEAIMLNPSAIMYATRASVYIK----MKKPNAAIRDATAALEINPDSAKGYK 189 (399)
Q Consensus 118 a~~~k~~g~~~~~----~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~----l~~~~~Ai~d~~~Al~l~p~~~~a~~ 189 (399)
+..+...|..++. .+++++|+.+|.+|+... ++.+++++|.+|.. .+++++|+.+|++++.. .++.+++
T Consensus 75 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~ 151 (490)
T 2xm6_A 75 TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQ 151 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHH
Confidence 3445566666666 667777777777766533 45566667777766 66777777777776654 3566777
Q ss_pred HHHHHHHh----cCCHHHHHHHHHHHHhhCCcHHHHHHHHHHhHH----HHhHHHHHHHHHH
Q 044737 190 TRGMAHAM----LGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPN----ALRIEEHRRKYDR 243 (399)
Q Consensus 190 ~~g~a~~~----lg~~eeA~~~l~~Al~ldp~~~~~~~lk~v~~~----~~k~~e~~~~ye~ 243 (399)
.+|.+|.. .+++++|+..|+++++... ......|..+... .....+...+|++
T Consensus 152 ~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~-~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~ 212 (490)
T 2xm6_A 152 SMGDAYFEGDGVTRDYVMAREWYSKAAEQGN-VWSCNQLGYMYSRGLGVERNDAISAQWYRK 212 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC-HHHHHHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 77777766 6677777777777766531 2233344444333 3334444444443
No 205
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.21 E-value=1.3e-05 Score=67.03 Aligned_cols=90 Identities=17% Similarity=0.086 Sum_probs=76.2
Q ss_pred CCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh----cCCHHHHHH
Q 044737 132 GKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM----LGHWEEAVH 206 (399)
Q Consensus 132 g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~----lg~~eeA~~ 206 (399)
+++++|+.+|.++.+... .+. +|.+|.....++.|+.+|.+|++. .++.+++++|.+|.. .+++++|+.
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 82 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQ 82 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 478999999999999987 655 999999999999999999999997 689999999999998 899999999
Q ss_pred HHHHHHhhCCcHHHHHHHHHHh
Q 044737 207 DLHVASKIDFDEEIAAVLKKVE 228 (399)
Q Consensus 207 ~l~~Al~ldp~~~~~~~lk~v~ 228 (399)
.|++|.+.... .....|..+.
T Consensus 83 ~~~~Aa~~g~~-~a~~~Lg~~y 103 (138)
T 1klx_A 83 YYSKACGLNDQ-DGCLILGYKQ 103 (138)
T ss_dssp HHHHHHHTTCH-HHHHHHHHHH
T ss_pred HHHHHHcCCCH-HHHHHHHHHH
Confidence 99999988433 2233444443
No 206
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.18 E-value=7.8e-06 Score=70.18 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 044737 119 AEAKAKAMEAISEG---KLDEAIELSTEAIMLN-P--SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYK 189 (399)
Q Consensus 119 ~~~k~~g~~~~~~g---~~~~Ai~~y~~Ai~l~-P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~ 189 (399)
+..++.|..+.+.. ++.++|..++..++.+ | ...+++++|.+|+++++|+.|++.|+++|+++|++.+|..
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~ 109 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 109 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 46788999999988 7779999999999999 8 6999999999999999999999999999999999987664
No 207
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.10 E-value=1.6e-05 Score=62.45 Aligned_cols=67 Identities=24% Similarity=0.128 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 044737 118 AAEAKAKAMEAISEGK---LDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS 184 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~---~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~ 184 (399)
+..+...|..++..++ ..+|+.++.+||.++| +..++..+|..+++.|+|.+|+..++++++.+|..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4577888888876665 7999999999999999 99999999999999999999999999999999984
No 208
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.03 E-value=8.4e-05 Score=71.28 Aligned_cols=97 Identities=11% Similarity=-0.073 Sum_probs=80.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHH
Q 044737 121 AKAKAMEAISEGKLDEAIELSTEAIMLNP---SAIMYATRASVYIKMKKPNAAIRDATAALEINPD------SAKGYKTR 191 (399)
Q Consensus 121 ~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P---~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~------~~~a~~~~ 191 (399)
+...|.+++..|++++|++.|.++|..+| +..++..++.+|+++++++.|.+.+.+..+.+|+ .+..++.-
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Lae 182 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAE 182 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHH
Confidence 45788889999999999999999998885 7889999999999999999999999999999983 33333333
Q ss_pred HHHHHhcC--CHHHHHHHHHHHHhhCCc
Q 044737 192 GMAHAMLG--HWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 192 g~a~~~lg--~~eeA~~~l~~Al~ldp~ 217 (399)
+.+....| ++.+|...|+++....|+
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 44466666 899999999999888887
No 209
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.0001 Score=72.08 Aligned_cols=104 Identities=7% Similarity=-0.042 Sum_probs=78.8
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-------SAIMYATRASVYIKMKKPNAAIRDATAALEIN-- 181 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~-- 181 (399)
..........+...|..|+..|+|++|+..|.+++.+.+ ...++.+++.++...++++.|+..|.+++.+.
T Consensus 48 ~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 127 (434)
T 4b4t_Q 48 DKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKR 127 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 344445566788999999999999999999999988754 13455667777777788888888888877653
Q ss_pred ----CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 182 ----PDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 182 ----p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
+..+..+.++|.+|..+|+|.+|+..+++++..
T Consensus 128 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~ 164 (434)
T 4b4t_Q 128 EKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLRE 164 (434)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHH
Confidence 233667788888888888888888888877665
No 210
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=2.5e-05 Score=76.42 Aligned_cols=127 Identities=10% Similarity=0.038 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP-S-----------------AIMYATRASVYIKMKKPNAAIRDATAALEIN 181 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~-----------------a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~ 181 (399)
....+|..+++.|+|.+|++.|.++++.+| . ..++.++|.+|..+|+|++|+..+.+++.+.
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 345678889999999999999999999887 2 2468899999999999999999999999986
Q ss_pred CCCHH------HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-------HHHHHHHHHhHHHHhHHHHHHHHHHHHH
Q 044737 182 PDSAK------GYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-------EIAAVLKKVEPNALRIEEHRRKYDRLRR 246 (399)
Q Consensus 182 p~~~~------a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-------~~~~~lk~v~~~~~k~~e~~~~ye~l~~ 246 (399)
+...+ .+..++.++...++++.|+..|++++.+.... .+...|..+....+++.++...+..+.+
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~ 163 (434)
T 4b4t_Q 86 MQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLR 163 (434)
T ss_dssp HTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHH
Confidence 65533 34557888888999999999999998875432 2344556666666666666666655443
No 211
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.96 E-value=4e-05 Score=76.97 Aligned_cols=85 Identities=12% Similarity=0.042 Sum_probs=63.2
Q ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHhCC-CHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 122 KAKAMEAISE----GKLDEAIELSTEAIMLNP-SAIMYATRASV-Y--IKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 122 k~~g~~~~~~----g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a-~--~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
...|..+... +++++|+.+|.+++ | ++.+++++|.+ | ...+++.+|+.+|.++++.+ ++.+++++|.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~ 291 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGK 291 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHH
Confidence 4455555444 67888888888877 7 77888888887 3 45778888888888887654 7788888887
Q ss_pred HHHhcC-----CHHHHHHHHHHHH
Q 044737 194 AHAMLG-----HWEEAVHDLHVAS 212 (399)
Q Consensus 194 a~~~lg-----~~eeA~~~l~~Al 212 (399)
+|. .| ++++|+..|++|.
T Consensus 292 ~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 292 LYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp HHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred HHH-cCCCCCCCHHHHHHHHHHHh
Confidence 777 45 7888888888877
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.92 E-value=6.8e-05 Score=71.92 Aligned_cols=94 Identities=10% Similarity=-0.023 Sum_probs=79.7
Q ss_pred HHHHHHHHHHcC--CHHHHHHHHHHHHHhCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCCH
Q 044737 121 AKAKAMEAISEG--KLDEAIELSTEAIMLNPS---AIMYATRASVYIKMKKPNAAIRDATAALEI----------NPDSA 185 (399)
Q Consensus 121 ~k~~g~~~~~~g--~~~~Ai~~y~~Ai~l~P~---a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l----------~p~~~ 185 (399)
....+.+.+..| ++.+|+..|+++....|. ..++.| |++++|+|++|..+++.++++ +|+++
T Consensus 179 ~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~ 255 (310)
T 3mv2_B 179 NLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKP 255 (310)
T ss_dssp HHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHH
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCH
Confidence 334454466556 999999999998888873 445555 899999999999999988887 58899
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 186 KGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 186 ~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
.++.++..+...+|+ +|.+.+.++.+++|+++
T Consensus 256 ~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 256 TFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 999999999999998 89999999999999997
No 213
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.90 E-value=0.0001 Score=82.69 Aligned_cols=118 Identities=17% Similarity=0.088 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----------------
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINP---------------- 182 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p---------------- 182 (399)
..+...|..++..|+|++|+.+|++| ..|..++.||.++|+|++|++.+.+|...++
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA-------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~L 1268 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRL 1268 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh-------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHH
Confidence 35678999999999999999999985 4789999999999999999999999854432
Q ss_pred ---------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHh--HHHHhHHHHHHHHHH
Q 044737 183 ---------DSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVE--PNALRIEEHRRKYDR 243 (399)
Q Consensus 183 ---------~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~--~~~~k~~e~~~~ye~ 243 (399)
.++..+..++..|..+|.|++|+..|++++.+++.+ .....|..+. -+-.++.+|.+.|..
T Consensus 1269 A~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~peklmEhlk~f~~ 1341 (1630)
T 1xi4_A 1269 AQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWS 1341 (1630)
T ss_pred HHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 134455566777889999999999999999999776 4444444443 234555666665543
No 214
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.84 E-value=7.2e-05 Score=84.00 Aligned_cols=90 Identities=23% Similarity=0.220 Sum_probs=76.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHH--------------------HhC--C-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 124 KAMEAISEGKLDEAIELSTEAI--------------------MLN--P-SAIMYATRASVYIKMKKPNAAIRDATAALEI 180 (399)
Q Consensus 124 ~g~~~~~~g~~~~Ai~~y~~Ai--------------------~l~--P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l 180 (399)
.|..+...|.|++|+..|.++- ++. . ...+|+++|.++...|+|.+|+..|.+|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 3777888888888877765543 222 2 6889999999999999999999999776
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 181 NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 181 ~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+++.+|.+++.++..+|+|++|++.|..|.+..++.
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~ 1167 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES 1167 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccc
Confidence 889999999999999999999999999999888553
No 215
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.72 E-value=6.7e-05 Score=75.26 Aligned_cols=87 Identities=14% Similarity=0.107 Sum_probs=71.0
Q ss_pred cCHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 110 VTDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI 180 (399)
Q Consensus 110 ~~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l 180 (399)
+.++....+..+.+.|.+|...|+|++|+.+|.++|.+ +| .+..|+|+|.+|..+|+|++|+..+.+|+++
T Consensus 321 lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 321 LPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 34555677888999999999999999999999999986 45 7899999999999999999999999999986
Q ss_pred -----CCCCH---HHHHHHHHHHH
Q 044737 181 -----NPDSA---KGYKTRGMAHA 196 (399)
Q Consensus 181 -----~p~~~---~a~~~~g~a~~ 196 (399)
-|+++ ..+.+++.++.
T Consensus 401 ~~~~lG~~Hp~~~~~~~~l~~~~~ 424 (429)
T 3qwp_A 401 MRVTHGREHSLIEDLILLLEECDA 424 (429)
T ss_dssp HHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCChHHHHHHHHHHHHHH
Confidence 34544 34444554443
No 216
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.69 E-value=4.8e-05 Score=76.39 Aligned_cols=73 Identities=19% Similarity=0.150 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcC
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLG 199 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg 199 (399)
.+...|..++..|+|++|+.+|+++ ..|.++|.|+.++|+|++|++.+.+| .+++.|.....++..+|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ 191 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGK 191 (449)
T ss_dssp -------------CTTTHHHHHHHT-------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcC
Confidence 6677777778888888888777755 35677777777777777777777777 24555555444444443
Q ss_pred CHHHH
Q 044737 200 HWEEA 204 (399)
Q Consensus 200 ~~eeA 204 (399)
+|+.|
T Consensus 192 ef~lA 196 (449)
T 1b89_A 192 EFRLA 196 (449)
T ss_dssp CHHHH
T ss_pred cHHHH
Confidence 33333
No 217
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.65 E-value=0.00045 Score=57.54 Aligned_cols=77 Identities=12% Similarity=0.005 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHHHHHHHH
Q 044737 150 SAIMYATRASVYIKMKKP---NAAIRDATAALEINPD-SAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLK 225 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~---~~Ai~d~~~Al~l~p~-~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~~~~~lk 225 (399)
++...++.|.|+++..+. ..+|..++..++.+|. ....+|.+|.+|+++|+|+.|..+++.+|+++|+|.....|+
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 888999999999998865 5789999999999884 578999999999999999999999999999999995444444
Q ss_pred H
Q 044737 226 K 226 (399)
Q Consensus 226 ~ 226 (399)
.
T Consensus 119 ~ 119 (134)
T 3o48_A 119 S 119 (134)
T ss_dssp H
T ss_pred H
Confidence 3
No 218
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.64 E-value=0.00041 Score=60.05 Aligned_cols=93 Identities=15% Similarity=0.087 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---C-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CC-
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLN---P-------SAIMYATRASVYIKMKKPNAAIRDATAALEINP---DS- 184 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~---P-------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p---~~- 184 (399)
..+++....++..+.|+.|+-++..++.+. | .+.+++.+|.+++..++|..|...|.+||.+.- .+
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 356778888999999999999999877663 2 256889999999999999999999999977521 11
Q ss_pred ---------------------HHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044737 185 ---------------------AKGYKTRGMAHAMLGHWEEAVHDLHVA 211 (399)
Q Consensus 185 ---------------------~~a~~~~g~a~~~lg~~eeA~~~l~~A 211 (399)
....|+.+.||..++++++|+..++..
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 257799999999999999999988764
No 219
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.63 E-value=0.0015 Score=55.00 Aligned_cols=76 Identities=12% Similarity=0.004 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHHHHHHHH
Q 044737 150 SAIMYATRASVYIKMKKP---NAAIRDATAALEINPD-SAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLK 225 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~---~~Ai~d~~~Al~l~p~-~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~~~~~lk 225 (399)
+....++.|.|+++..+. ..+|..++..++..|. ....+|.+|.+++++|+|.+|..+++.+|+++|+|.....|+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 888999999999998865 4789999999998884 567999999999999999999999999999999995433333
No 220
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.62 E-value=0.00011 Score=73.74 Aligned_cols=69 Identities=13% Similarity=0.114 Sum_probs=62.2
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 112 DEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYIKMKKPNAAIRDATAALEI 180 (399)
Q Consensus 112 ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l 180 (399)
.+....+..+.+.|.+|...|+|++|+.+|.++|.+ +| .+..|.|+|.+|..+|+|++|+..|++|+++
T Consensus 334 ~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 334 DSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 344566778889999999999999999999999987 45 7899999999999999999999999999986
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.52 E-value=0.00041 Score=57.40 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDE---AIELSTEAIMLN-P--SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRG 192 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~---Ai~~y~~Ai~l~-P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g 192 (399)
+..++.|..+.+..+... +|.++...++.+ | .-.+++.+|.+|+++++|..|++.|+.+|+++|+|.+|...+.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 466788888998887776 999999999888 7 7899999999999999999999999999999999998876655
Q ss_pred HH
Q 044737 193 MA 194 (399)
Q Consensus 193 ~a 194 (399)
.+
T Consensus 116 ~i 117 (126)
T 1nzn_A 116 LI 117 (126)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 222
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.47 E-value=0.0012 Score=66.32 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
.+..+...|..+++.|+|++|++.|.+|. +...|...+.++..+++|+.|...... |.++|+ -+..+..+|.
T Consensus 147 ~a~n~~~LA~~L~~Lg~yq~AVea~~KA~----~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad---~l~~lv~~Ye 218 (449)
T 1b89_A 147 NVSNFGRLASTLVHLGEYQAAVDGARKAN----STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHAD---ELEELINYYQ 218 (449)
T ss_dssp HTTCHHHHHHHHHTTTCHHHHHHHHHHHT----CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHH---HHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHhccHHHHHHHHHHcC----CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHh---hHHHHHHHHH
Confidence 44566689999999999999999999992 578899999999999999999765553 445544 4556788899
Q ss_pred hcCCHHHHHHHHHHHHhhCCcH-HHHHHHHHHhH--HHHhHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFDE-EIAAVLKKVEP--NALRIEEHRRKY 241 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~~-~~~~~lk~v~~--~~~k~~e~~~~y 241 (399)
.+|+|++|+..|++++.+++.. .+...|..+.. +-.++.++.+.|
T Consensus 219 k~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~ 266 (449)
T 1b89_A 219 DRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELF 266 (449)
T ss_dssp HTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999999999776 55555555433 234455554443
No 223
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.43 E-value=0.0027 Score=60.06 Aligned_cols=104 Identities=10% Similarity=-0.020 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHH------cCCHHHHHHH-----HHHHHHh-CC-CHHHHHHHHHHHHH---c--CC------HHHH
Q 044737 115 REAAAEAKAKAMEAIS------EGKLDEAIEL-----STEAIML-NP-SAIMYATRASVYIK---M--KK------PNAA 170 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~------~g~~~~Ai~~-----y~~Ai~l-~P-~a~~~~nra~a~~~---l--~~------~~~A 170 (399)
...|..+..+|..|.. ...|.++++. +.+++.. +| ++.+++|.|.++.. + +. ...|
T Consensus 103 ~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A 182 (301)
T 3u64_A 103 YSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAA 182 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHH
Confidence 4455666666555532 2444444442 3444443 55 88889998888754 2 22 4678
Q ss_pred HHHHHHHHHhCCC--CHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHhhCCcH
Q 044737 171 IRDATAALEINPD--SAKGYKTRGMAHAML-----GHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 171 i~d~~~Al~l~p~--~~~a~~~~g~a~~~l-----g~~eeA~~~l~~Al~ldp~~ 218 (399)
...+++||+++|+ +..+|..+|..|..+ |+.++|...|++|++++|+.
T Consensus 183 ~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 183 VMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 8999999999999 566999999999996 99999999999999999964
No 224
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.34 E-value=0.0011 Score=64.99 Aligned_cols=72 Identities=22% Similarity=0.191 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTR 191 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~ 191 (399)
..+...+..++..|++++|+..+++||.++|++..|..+|.++.-.|++++|+..|.+|+.++|... .|++.
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~-t~~~~ 349 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN-TLYWI 349 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH-HHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC-hHHHH
Confidence 3455567777888999999999999999999888899999999999999999999999999999775 44443
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.32 E-value=0.0023 Score=53.26 Aligned_cols=76 Identities=11% Similarity=-0.022 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKL---DEAIELSTEAIMLNP--SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGM 193 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~---~~Ai~~y~~Ai~l~P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~ 193 (399)
...++.|..+.+..+. .++|.+++..++.+| .-.+++.+|.+|+++|+|..|++.|+.+|++.|+|.+|...+..
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 3567778888887654 479999999999999 68999999999999999999999999999999999987765544
Q ss_pred H
Q 044737 194 A 194 (399)
Q Consensus 194 a 194 (399)
+
T Consensus 121 I 121 (134)
T 3o48_A 121 V 121 (134)
T ss_dssp H
T ss_pred H
Confidence 4
No 226
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.31 E-value=0.0077 Score=59.32 Aligned_cols=112 Identities=14% Similarity=0.096 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---C--------------------HHHHHHHHHHHHHcCCHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP---S--------------------AIMYATRASVYIKMKKPNAAI 171 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P---~--------------------a~~~~nra~a~~~l~~~~~Ai 171 (399)
....+.+...|......++...|+..|.+|+.+.- . ..+...++.+++.+|++.+|+
T Consensus 112 ~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 112 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 45667777888888889999999999999998742 0 133346778888999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-------hCCcHHHHHHHHH
Q 044737 172 RDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASK-------IDFDEEIAAVLKK 226 (399)
Q Consensus 172 ~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~-------ldp~~~~~~~lk~ 226 (399)
..+.+++..+|-+-.+|..+-.+|...|+..+|+..|+++.+ ++|......+...
T Consensus 192 ~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~ 253 (388)
T 2ff4_A 192 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNER 253 (388)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999988754 4676654444444
No 227
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.29 E-value=0.0024 Score=53.75 Aligned_cols=74 Identities=9% Similarity=-0.043 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKL---DEAIELSTEAIMLNP--SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRG 192 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~---~~Ai~~y~~Ai~l~P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g 192 (399)
+..++.|..+.+..+. .++|.+++..++..| .-.+++.+|.+|+++++|..|.+.|+.+|++.|+|.+|...+.
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3567788888888765 479999999999999 7889999999999999999999999999999999987665443
No 228
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.14 E-value=0.0071 Score=64.05 Aligned_cols=80 Identities=9% Similarity=-0.078 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 044737 135 DEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAI-RDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVAS 212 (399)
Q Consensus 135 ~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai-~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al 212 (399)
......|.+||..+| +..+|...+..+...++...|+ ..+.+|+..+|.+...|+.++......++++.|...|++++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 456788999999999 9999999999999999999997 99999999999999999999999999999999999999999
Q ss_pred hh
Q 044737 213 KI 214 (399)
Q Consensus 213 ~l 214 (399)
..
T Consensus 406 ~~ 407 (679)
T 4e6h_A 406 DR 407 (679)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 229
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.14 E-value=0.0046 Score=65.48 Aligned_cols=120 Identities=9% Similarity=-0.072 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-CC-CHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIML-NP-SAIMYATRASVYIKMKK-PNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l-~P-~a~~~~nra~a~~~l~~-~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
.|...++...+.+..+.|...|.+|+.. .+ ...+|...|....+.++ ++.|...|+++|+..|+++..|...+....
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~ 515 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLI 515 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 4566666667788999999999999998 44 67888877777777654 999999999999999999999989999899
Q ss_pred hcCCHHHHHHHHHHHHhhCCc--H--HHHHHHHHHhHHHHhHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASKIDFD--E--EIAAVLKKVEPNALRIEEHRR 239 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~ldp~--~--~~~~~lk~v~~~~~k~~e~~~ 239 (399)
..++.+.|...|++|+...|+ . .++......+...+.....+.
T Consensus 516 ~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~ 562 (679)
T 4e6h_A 516 YVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRT 562 (679)
T ss_dssp HHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999999999999884 2 334444444444444333333
No 230
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.53 E-value=0.051 Score=46.20 Aligned_cols=98 Identities=13% Similarity=-0.027 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHcCCH------HHHHHHHHHHHHhCC-C--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 044737 120 EAKAKAMEAISEGKL------DEAIELSTEAIMLNP-S--------AIMYATRASVYIKMKKPNAAIRDATAALEINPDS 184 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~------~~Ai~~y~~Ai~l~P-~--------a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~ 184 (399)
.|..-....-+.|+. +.-++.|++|+..-| . +-+|.+.|.- ..+++.+.|.+.|+.|++++..+
T Consensus 15 ~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkF 93 (161)
T 4h7y_A 15 DWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKF 93 (161)
T ss_dssp HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTB
T ss_pred HHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHH
Confidence 444444444455777 888899999999877 2 5566666644 67799999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 185 AKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 185 ~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
++.|.-.|.--.+.|+...|.+.+.+|+.+.|..
T Consensus 94 AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 94 AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc
Confidence 9999999999999999999999999999999976
No 231
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.32 E-value=0.22 Score=50.32 Aligned_cols=124 Identities=8% Similarity=-0.072 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHH------------------------------------
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASV------------------------------------ 160 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a------------------------------------ 160 (399)
...|...+..+...|+.+.|...|.+||.. | +..+|...+..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 345677778888889999999999999999 9 64444332221
Q ss_pred ----HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhCCcHH-HHHHHHHHhHHHHhH
Q 044737 161 ----YIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLG-HWEEAVHDLHVASKIDFDEE-IAAVLKKVEPNALRI 234 (399)
Q Consensus 161 ----~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg-~~eeA~~~l~~Al~ldp~~~-~~~~lk~v~~~~~k~ 234 (399)
+.+.+..+.|...+.+| ...+.....|...|.....++ +++.|...|+.+++..|++. .+...-.....++..
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~ 370 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDE 370 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCH
Confidence 22355677888888888 443345667777776666666 59999999999999888753 222222223334444
Q ss_pred HHHHHHHHH
Q 044737 235 EEHRRKYDR 243 (399)
Q Consensus 235 ~e~~~~ye~ 243 (399)
...+..|++
T Consensus 371 ~~aR~l~er 379 (493)
T 2uy1_A 371 ENARALFKR 379 (493)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444545444
No 232
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.24 E-value=0.012 Score=50.78 Aligned_cols=79 Identities=13% Similarity=-0.021 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---C---C--------------------HHHHHHHHHHHHHcCCHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLN---P---S--------------------AIMYATRASVYIKMKKPNA 169 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~---P---~--------------------a~~~~nra~a~~~l~~~~~ 169 (399)
..++.+...|+.+|..++|..|...|.+||.+. + + ..+.+.+|.||.+++++++
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 467788999999999999999999999998651 1 1 2688999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044737 170 AIRDATAALEINPDSAKGYKTRGMAH 195 (399)
Q Consensus 170 Ai~d~~~Al~l~p~~~~a~~~~g~a~ 195 (399)
||..++.+ -..-..++.-.-+|..|
T Consensus 141 Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 141 AIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 99986542 22335666666666655
No 233
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.07 E-value=0.061 Score=50.02 Aligned_cols=63 Identities=25% Similarity=0.297 Sum_probs=58.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 044737 125 AMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKG 187 (399)
Q Consensus 125 g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a 187 (399)
...+++.+++++|+......|+.+| ++.+...+...++-.|+|+.|+..++.+.+++|+....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 3467899999999999999999999 99999999999999999999999999999999998654
No 234
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.74 E-value=0.18 Score=51.24 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 044737 134 LDEAIELSTEAIMLN--PSAIMYATRASVYIKMKKPNAAIRDATAALEIN-PDSAKGYKTRGMAHAMLGHWEEAVHDLHV 210 (399)
Q Consensus 134 ~~~Ai~~y~~Ai~l~--P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~-p~~~~a~~~~g~a~~~lg~~eeA~~~l~~ 210 (399)
++.|++.|.+.+... |+...|..+-.+|.+.|++++|+..+++..+.. .-+...|..+-.+|...|++++|...|..
T Consensus 86 l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 86 LSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHH
Confidence 444555555444432 255555555555555555555555555544432 11344455555555555555555555554
Q ss_pred HHhh--CCcHHHHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 211 ASKI--DFDEEIAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 211 Al~l--dp~~~~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
..+. .|+..+...|-.+.-+.+++.++.+.++++
T Consensus 166 M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~M 201 (501)
T 4g26_A 166 MVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRL 201 (501)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHH
Confidence 4432 344443333333333334444444433333
No 235
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.69 E-value=0.029 Score=59.88 Aligned_cols=79 Identities=11% Similarity=0.123 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHh--------C----------C-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 044737 134 LDEAIELSTEAIML--------N----------P-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMA 194 (399)
Q Consensus 134 ~~~Ai~~y~~Ai~l--------~----------P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a 194 (399)
=-+||....++|+. . | ...++.--+.-++..++|+-|+..+.+|+.+-|..-..|++++.+
T Consensus 301 Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~v 380 (754)
T 4gns_B 301 ELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARC 380 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHH
Confidence 34677877777742 1 2 234566667777889999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 044737 195 HAMLGHWEEAVHDLHVAS 212 (399)
Q Consensus 195 ~~~lg~~eeA~~~l~~Al 212 (399)
|..+++|+.|+-.+.-+-
T Consensus 381 Yi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 381 HIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHTTCHHHHHHHHHHSC
T ss_pred HHHhccHHHHHHHHhcCC
Confidence 999999999998877663
No 236
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.50 E-value=0.43 Score=48.32 Aligned_cols=107 Identities=7% Similarity=0.039 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLN--PSAIMYATRASVYIKMKKPNAAIRDATAALEINP-DSAKGYKTRGMAHA 196 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~--P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p-~~~~a~~~~g~a~~ 196 (399)
.+...-..+.+.|++++|+..|.+..... |+...|..+-.+|.+.|++++|++.++..++..- -+...|..+-.+|.
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~ 186 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSM 186 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 45666778899999999999999988764 4999999999999999999999999999887532 35678888999999
Q ss_pred hcCCHHHHHHHHHHHHh--hCCcHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVASK--IDFDEEIAAVLKK 226 (399)
Q Consensus 197 ~lg~~eeA~~~l~~Al~--ldp~~~~~~~lk~ 226 (399)
..|++++|...|++..+ +.|+..+...+..
T Consensus 187 ~~g~~d~A~~ll~~Mr~~g~~ps~~T~~~l~~ 218 (501)
T 4g26_A 187 DTKNADKVYKTLQRLRDLVRQVSKSTFDMIEE 218 (501)
T ss_dssp HTTCHHHHHHHHHHHHHHTSSBCHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCCcCHHHHHHHHH
Confidence 99999999999998765 4577665544444
No 237
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.35 E-value=0.27 Score=49.72 Aligned_cols=92 Identities=12% Similarity=-0.072 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMK-KPNAAIRDATAALEINPDSAKGYKTRGMAHA 196 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~-~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~ 196 (399)
..|..-+....+.+.++.|...|.+| ...+ ...+|...|...+.++ +++.|...++.+++..|+.+..|...+....
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~ 365 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLL 365 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 44566666666778899999999999 4333 7788888787777666 5999999999999999999988888888888
Q ss_pred hcCCHHHHHHHHHHH
Q 044737 197 MLGHWEEAVHDLHVA 211 (399)
Q Consensus 197 ~lg~~eeA~~~l~~A 211 (399)
.+|+.+.|...|+++
T Consensus 366 ~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 366 RIGDEENARALFKRL 380 (493)
T ss_dssp HHTCHHHHHHHHHHS
T ss_pred HcCCHHHHHHHHHHH
Confidence 999999999999998
No 238
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=94.72 E-value=0.017 Score=41.41 Aligned_cols=46 Identities=15% Similarity=0.317 Sum_probs=31.8
Q ss_pred chhccCCCHHHHh----hcCCHHHHHHHHHHhhChHHHHHhhcCCcHHHHHHHHHHhcCC
Q 044737 342 DFSKILNDPELMA----AFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFGG 397 (399)
Q Consensus 342 ~~~~~~~dpe~~~----~~~dp~~~~~~~~~~~np~~~~~~~~~p~~~~~~~~l~~~~~~ 397 (399)
.+..+|+||++++ +++||. .++.+++||..+. +...+..+++++||
T Consensus 13 e~~~~m~dP~~~~~lq~i~~NP~---~~~~~~~dP~v~~-------~~~~L~~~~~g~~~ 62 (62)
T 2lnm_A 13 DVAMAFQNPRVQAALMECSENPM---NIMKYQNDKEVMD-------VFNKISQLFPGMTG 62 (62)
T ss_dssp HHHHHTTSHHHHHHHHHHTTCGG---GHHHHTTCHHHHH-------HHHHHHHHSSSCCC
T ss_pred HHHHHcCCHHHHHHHHHHHHCHH---HHHHHHhChHHHH-------HHHHHHHHhCCCCC
Confidence 6778999999987 555665 3455788888663 45555666677665
No 239
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.60 E-value=0.077 Score=56.58 Aligned_cols=59 Identities=15% Similarity=0.080 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAA 177 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~A 177 (399)
.-+..++..+.+.++|+.|+.+..+|+...| ....|+.++.||+.+++|+.|+-.++-+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3566778889999999999999999999999 9999999999999999999999877665
No 240
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.89 E-value=0.45 Score=44.18 Aligned_cols=61 Identities=15% Similarity=0.030 Sum_probs=57.1
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHH
Q 044737 159 SVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEE 219 (399)
Q Consensus 159 ~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~ 219 (399)
..+++.++..+|+..+...|+.+|.+++....+-..++..|+|+.|..-++.+.+++|+..
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 3457789999999999999999999999999999999999999999999999999999974
No 241
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.80 E-value=0.16 Score=50.41 Aligned_cols=95 Identities=12% Similarity=-0.078 Sum_probs=77.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC---HHHHHH
Q 044737 121 AKAKAMEAISEGKLDEAIELSTEAIMLNP----SAIMYATRASVYIKMKKPNAAIRDATAALEI---NPDS---AKGYKT 190 (399)
Q Consensus 121 ~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P----~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l---~p~~---~~a~~~ 190 (399)
+..+|..+++.|+++.|++.|.++..... ...++.....+++..++|..+...+.+|..+ .+++ .+....
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~ 213 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTY 213 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHH
Confidence 45789999999999999999999988754 5788888889999999999999999998665 2333 234555
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhC
Q 044737 191 RGMAHAMLGHWEEAVHDLHVASKID 215 (399)
Q Consensus 191 ~g~a~~~lg~~eeA~~~l~~Al~ld 215 (399)
.|.++...++|..|...|..++.-.
T Consensus 214 ~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 214 YGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp HHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhChHHHHHHHHHHHhccC
Confidence 6778889999999999998876543
No 242
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.70 E-value=0.99 Score=44.32 Aligned_cols=91 Identities=13% Similarity=-0.007 Sum_probs=74.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC-----C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCC----HHHH
Q 044737 123 AKAMEAISEGKLDEAIELSTEAIMLN-----P--SAIMYATRASVYIKMKKPNAAIRDATAALEIN---PDS----AKGY 188 (399)
Q Consensus 123 ~~g~~~~~~g~~~~Ai~~y~~Ai~l~-----P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~---p~~----~~a~ 188 (399)
..|..|+..|+|.+|+..+++.++.. + ...+|.....+|..++++..+...+++|.... +.. +...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 67899999999999999999888752 2 57888999999999999999999999886653 122 2345
Q ss_pred HHHHHHHH-hcCCHHHHHHHHHHHHh
Q 044737 189 KTRGMAHA-MLGHWEEAVHDLHVASK 213 (399)
Q Consensus 189 ~~~g~a~~-~lg~~eeA~~~l~~Al~ 213 (399)
..-|.+|. ..++|..|..+|-.+++
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 55688888 89999999999988863
No 243
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=92.25 E-value=2 Score=37.20 Aligned_cols=92 Identities=18% Similarity=0.123 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC---------------CCCH
Q 044737 123 AKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALE--IN---------------PDSA 185 (399)
Q Consensus 123 ~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~--l~---------------p~~~ 185 (399)
..+..++-.|.|..|+-++. .+| .+...+-.+.||.++++|..|+..++..|+ ++ |.+-
T Consensus 38 L~~I~LyyngEY~R~Lf~L~---~lN-T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~Dk 113 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLH---KLN-TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDE 113 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHH---TCC-BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCH
T ss_pred hhhhhhhhcchHhHHHHHHH---hcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchH
Confidence 34666777788887776542 233 455555678899999999999999999983 32 3333
Q ss_pred H-HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 186 K-GYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 186 ~-a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
. .|..+|.++..+|+.++|+..|......+|=-
T Consensus 114 EfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf 147 (242)
T 3kae_A 114 EFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLF 147 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcccc
Confidence 3 45667999999999999999999999988754
No 244
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.22 E-value=0.71 Score=46.81 Aligned_cols=79 Identities=11% Similarity=-0.079 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
.-+...|..+.-...+..|..+|.+|+.++| +...|..+|..+...+++-.|+-+|.++|.....++.+.-++...+..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 4567889988888999999999999999999 999999999999999999999999999999988899999998888764
No 245
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=91.97 E-value=0.043 Score=40.47 Aligned_cols=14 Identities=21% Similarity=0.543 Sum_probs=6.4
Q ss_pred hhccCCCHHHHhhc
Q 044737 343 FSKILNDPELMAAF 356 (399)
Q Consensus 343 ~~~~~~dpe~~~~~ 356 (399)
+..+|+||++++++
T Consensus 22 i~~im~DP~~~~~l 35 (71)
T 2llw_A 22 VAAIMQDPVMQSIL 35 (71)
T ss_dssp HHHHHTCTHHHHHH
T ss_pred HHHHhCCHHHHHHH
Confidence 34444444444433
No 246
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=91.75 E-value=0.15 Score=39.37 Aligned_cols=24 Identities=21% Similarity=0.279 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 256 ERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 256 er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
++++++.+|++++.++.+|..||.
T Consensus 46 ~~f~~i~~Ay~~L~d~~~R~~YD~ 69 (92)
T 2o37_A 46 EKFKEISEAFEILNDPQKREIYDQ 69 (92)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHH
Confidence 478889999999999999999983
No 247
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=91.40 E-value=0.92 Score=44.27 Aligned_cols=61 Identities=15% Similarity=0.161 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALE 179 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~ 179 (399)
..+...+..++..|++.+|+..+..++..+| +-.+|..+-.+|+..|+..+|++.|+++-+
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455677888899999999999999999999 999999999999999999999999988755
No 248
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.23 E-value=1.1 Score=45.26 Aligned_cols=66 Identities=9% Similarity=0.074 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 152 IMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 152 ~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
.++..+|........+..|..+|.+|+.++|++...|..+|.+....+++-+|+-.|.+++.....
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~P 218 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFP 218 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBC
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCC
Confidence 355677777777888999999999999999999999999999999999999999999999876543
No 249
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=89.06 E-value=0.071 Score=39.27 Aligned_cols=19 Identities=21% Similarity=0.420 Sum_probs=9.7
Q ss_pred cCCCHHH-HhhcCCHHHHHH
Q 044737 346 ILNDPEL-MAAFSDPEVMAA 364 (399)
Q Consensus 346 ~~~dpe~-~~~~~dp~~~~~ 364 (399)
+|++|++ ..+++||+++..
T Consensus 9 ~f~~p~~~~kl~~dP~t~~~ 28 (71)
T 2llv_A 9 LFADPNLIENLKKNPKTSEM 28 (71)
T ss_dssp HHHSSSCHHHHHHSSTTHHH
T ss_pred hccChHHHHHHHcChHHHHH
Confidence 5556654 235555555444
No 250
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=87.80 E-value=2.5 Score=31.86 Aligned_cols=37 Identities=30% Similarity=0.232 Sum_probs=32.5
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML 147 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l 147 (399)
+......|..+..+|..+=+.|+|++|+.+|.+||..
T Consensus 12 ~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 12 QVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 4556788899999999999999999999999988875
No 251
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.74 E-value=8.5 Score=38.08 Aligned_cols=99 Identities=18% Similarity=0.077 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCC-
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIML----NP---SAIMYATRASVYIKMKKPNAAIRDATAALE---INPDS- 184 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l----~P---~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~---l~p~~- 184 (399)
..+.-....+..++..|+|.+|...+.....- .. ...+|......|+..++|..|...++++.. -.+..
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 34555667889999999999999998876542 22 477888889999999999999999988632 23333
Q ss_pred ---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 185 ---AKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 185 ---~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
...|...|..|...++|.+|..+|..++..
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 245666788999999999999999999764
No 252
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.84 E-value=4.8 Score=41.93 Aligned_cols=28 Identities=14% Similarity=0.097 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAA 177 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~A 177 (399)
+...|.++|..+++.++++.|+..|.++
T Consensus 680 ~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 680 AEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4556666666666666666666666553
No 253
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=85.60 E-value=4.2 Score=30.51 Aligned_cols=34 Identities=29% Similarity=0.337 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 114 KREAAAEAKAKAMEAISEGKLDEAIELSTEAIML 147 (399)
Q Consensus 114 ~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l 147 (399)
....|..+..+|..+=+.|+|.+|+.+|.+||..
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 4668888999999999999999999999988875
No 254
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=85.02 E-value=3.1 Score=43.31 Aligned_cols=84 Identities=14% Similarity=0.001 Sum_probs=58.3
Q ss_pred HcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 044737 130 SEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLH 209 (399)
Q Consensus 130 ~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~ 209 (399)
..+...++...+.+++....+..+.-+++...++.++|..|...+.+.-.-......+.|++|.++..+|+.++|...|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~ 343 (618)
T 1qsa_A 264 GNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILH 343 (618)
T ss_dssp STTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCChHHHHHHHhccccCCChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHH
Confidence 33434455556655544333333344444445677999999998876655444568899999999999999999999998
Q ss_pred HHHh
Q 044737 210 VASK 213 (399)
Q Consensus 210 ~Al~ 213 (399)
++..
T Consensus 344 ~~a~ 347 (618)
T 1qsa_A 344 QLMQ 347 (618)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8865
No 255
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=84.89 E-value=6.3 Score=30.18 Aligned_cols=30 Identities=27% Similarity=0.292 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAI 145 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai 145 (399)
+.|..+..+|..+=+.++|++|+.+|..||
T Consensus 13 ~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 13 TAAVAVLKRAVELDAESRYQQALVCYQEGI 42 (93)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344455555555555555555555554444
No 256
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=84.87 E-value=15 Score=40.59 Aligned_cols=98 Identities=9% Similarity=-0.126 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIM-----LNPSAIMYATRASVYIKMKKPNAAIRDATAALEIN-PDSAKGYKT 190 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~-----l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~-p~~~~a~~~ 190 (399)
....+...-+.+++.|+.++|...|.+..+ ..|+...|+.+-..|.+.|++++|+..+.+..+.. .-+...|..
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYnt 205 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAA 205 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 345677788899999999999999976442 34599999999999999999999999999887753 236677888
Q ss_pred HHHHHHhcCCH-HHHHHHHHHHHhh
Q 044737 191 RGMAHAMLGHW-EEAVHDLHVASKI 214 (399)
Q Consensus 191 ~g~a~~~lg~~-eeA~~~l~~Al~l 214 (399)
+-.++.+.|+. ++|...|++....
T Consensus 206 LI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 206 ALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 88889998885 6787777766543
No 257
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=84.83 E-value=0.18 Score=48.43 Aligned_cols=28 Identities=11% Similarity=0.156 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 253 VERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 253 ~~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
...++++++.+|++++.++.+|+.||.-
T Consensus 65 ~a~~~f~~i~~Ay~vL~d~~~R~~YD~~ 92 (329)
T 3lz8_A 65 DAEAKFKDLAEAWEVLKDEQRRAEYDQL 92 (329)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHHHHhhhhhhhcccchh
Confidence 3456899999999999999999999964
No 258
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=84.72 E-value=13 Score=38.55 Aligned_cols=81 Identities=16% Similarity=-0.028 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAML 198 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~l 198 (399)
..|+..|..+.+.++++.|+.+|.++-.. ..+..+|...++.+........+... .++-.| ..++..+
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~-------~~l~~l~~~~~~~~~~~~~~~~a~~~-~~~~~A----~~~~~~~ 749 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDL-------ESLFLLHSSFNNKEGLVTLAKDAETT-GKFNLA----FNAYWIA 749 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCH-------HHHHHHHHHTTCHHHHHHHHHHHHHT-TCHHHH----HHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccCh-------hhhHHHHHHcCCHHHHHHHHHHHHHc-CchHHH----HHHHHHc
Confidence 46788999999999999999999865322 22333344455555444433333332 222111 1245556
Q ss_pred CCHHHHHHHHHHH
Q 044737 199 GHWEEAVHDLHVA 211 (399)
Q Consensus 199 g~~eeA~~~l~~A 211 (399)
|++++|++.|.+.
T Consensus 750 g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 750 GDIQGAKDLLIKS 762 (814)
T ss_dssp TCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHc
Confidence 6666666655543
No 259
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=84.51 E-value=4 Score=35.32 Aligned_cols=80 Identities=11% Similarity=-0.013 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcC
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLG 199 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg 199 (399)
.|+..|..++..|+++-|..+|.++=.+ ..+...|.-.|+-+.-......|...+ ++ .....++..+|
T Consensus 36 ~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~-------~~L~~Ly~~tg~~e~L~kla~iA~~~g-~~----n~af~~~l~lG 103 (177)
T 3mkq_B 36 TWERLIQEALAQGNASLAEMIYQTQHSF-------DKLSFLYLVTGDVNKLSKMQNIAQTRE-DF----GSMLLNTFYNN 103 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTTCH-------HHHHHHHHHHTCHHHHHHHHHHHHHTT-CH----HHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHhCCH-------HHHHHHHHHhCCHHHHHHHHHHHHHCc-cH----HHHHHHHHHcC
Confidence 4556666666666666666665543221 222223333344333222222222221 11 22233566677
Q ss_pred CHHHHHHHHHHH
Q 044737 200 HWEEAVHDLHVA 211 (399)
Q Consensus 200 ~~eeA~~~l~~A 211 (399)
+++++++.|.+.
T Consensus 104 dv~~~i~lL~~~ 115 (177)
T 3mkq_B 104 STKERSSIFAEG 115 (177)
T ss_dssp CHHHHHHHHHHT
T ss_pred CHHHHHHHHHHC
Confidence 777777666543
No 260
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=83.66 E-value=3.2 Score=46.33 Aligned_cols=88 Identities=11% Similarity=-0.011 Sum_probs=70.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH--------------------hCC----CHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 044737 122 KAKAMEAISEGKLDEAIELSTEAIM--------------------LNP----SAIMYATRASVYIKMKKPNAAIRDATAA 177 (399)
Q Consensus 122 k~~g~~~~~~g~~~~Ai~~y~~Ai~--------------------l~P----~a~~~~nra~a~~~l~~~~~Ai~d~~~A 177 (399)
+-+|..++..|+|++|+.+|.+|-. ..+ ...+|......+-+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 6789999999999999999987731 111 3567778888888899999999999999
Q ss_pred HHhCC-CCH----HHHHHHHHHHHhcCCHHHHHHHHH
Q 044737 178 LEINP-DSA----KGYKTRGMAHAMLGHWEEAVHDLH 209 (399)
Q Consensus 178 l~l~p-~~~----~a~~~~g~a~~~lg~~eeA~~~l~ 209 (399)
|+.-+ +.. ..|.+.=.++..+++|++|...+.
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 98754 332 267888889999999999977664
No 261
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=83.64 E-value=8.2 Score=29.11 Aligned_cols=30 Identities=33% Similarity=0.278 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 117 AAAEAKAKAMEAISEGKLDEAIELSTEAIM 146 (399)
Q Consensus 117 ~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~ 146 (399)
.|..+..+|..+-..|+|++|+.+|..||.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344455555555555555555555554443
No 262
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=83.34 E-value=8.9 Score=30.74 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 114 KREAAAEAKAKAMEAISEGKLDEAIELSTEAIM 146 (399)
Q Consensus 114 ~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~ 146 (399)
.+..|..+..+|..+=..++|++|+.+|..||.
T Consensus 14 ~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 14 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 445556666666666666666666666655443
No 263
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=81.52 E-value=5.2 Score=33.86 Aligned_cols=68 Identities=15% Similarity=-0.058 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAK 186 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~ 186 (399)
+.-|..-| .+...++.++|.+.|..++.++. .+.+|...|.--++.++...|.+.+.+||.+.|....
T Consensus 61 I~LWIrYA-~~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 61 ARIQVRFA-ELKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp HHHHHHHH-HHHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred HHHHHHHH-HHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH
Confidence 33444444 23555899999999999999988 9999999999999999999999999999999987653
No 264
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.44 E-value=1.3 Score=34.28 Aligned_cols=28 Identities=18% Similarity=0.163 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSSSE 281 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~g~ 281 (399)
..++++++.+|++++.++.+|..||..-
T Consensus 56 a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 56 AAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 4568899999999999999999999643
No 265
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=81.15 E-value=25 Score=33.53 Aligned_cols=95 Identities=15% Similarity=0.096 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h---CC---CHHHHHHHHHHHHHcC-------------------C--
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIM-L---NP---SAIMYATRASVYIKMK-------------------K-- 166 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~-l---~P---~a~~~~nra~a~~~l~-------------------~-- 166 (399)
-+.-+.++..++.|.+.++|++|++++..... + .- -+.+-..+..+|.+.+ .
T Consensus 32 YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~ 111 (336)
T 3lpz_A 32 YEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGE 111 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTC
T ss_pred cHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCC
Confidence 34456788888999999999999997544433 2 11 1122222223333322 1
Q ss_pred ------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 044737 167 ------PNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLH 209 (399)
Q Consensus 167 ------~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~ 209 (399)
...||.+..+.=...--++..+..+|..|..-++|.+|...|-
T Consensus 112 p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 112 PVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 1223333332111122457788888999999999999988773
No 266
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=80.63 E-value=12 Score=27.85 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIML 147 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l 147 (399)
...|..+..+|...=..|+|++|+.+|..||.+
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 445566666666666666666666666655543
No 267
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=79.86 E-value=18 Score=27.66 Aligned_cols=28 Identities=25% Similarity=0.220 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 044737 185 AKGYKTRGMAHAMLGHWEEAVHDLHVAS 212 (399)
Q Consensus 185 ~~a~~~~g~a~~~lg~~eeA~~~l~~Al 212 (399)
+..+-|++..+...|+|++||.+.++|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3455566666666666666666555443
No 268
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.60 E-value=0.92 Score=34.40 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
..++++++.+|++++.++.+|..||.
T Consensus 45 a~~~f~~i~~Ay~~L~d~~~R~~Yd~ 70 (88)
T 2ctr_A 45 AEAKFREIAEAYETLSDANRRKEYDT 70 (88)
T ss_dssp HHHHHHHHHHHHHHHHSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 45688999999999999999999984
No 269
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=77.99 E-value=20 Score=26.96 Aligned_cols=14 Identities=21% Similarity=-0.095 Sum_probs=7.5
Q ss_pred HHHHHHHhhCCcHH
Q 044737 206 HDLHVASKIDFDEE 219 (399)
Q Consensus 206 ~~l~~Al~ldp~~~ 219 (399)
..|..+++..++..
T Consensus 44 e~ll~alk~e~d~~ 57 (86)
T 4a5x_A 44 DLLLQVLKGTKDNT 57 (86)
T ss_dssp HHHHHHHHTCCCHH
T ss_pred HHHHHHHhhCCCHH
Confidence 33455555666654
No 270
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=77.58 E-value=25 Score=28.01 Aligned_cols=10 Identities=10% Similarity=0.029 Sum_probs=4.9
Q ss_pred HHHHHHHhhC
Q 044737 206 HDLHVASKID 215 (399)
Q Consensus 206 ~~l~~Al~ld 215 (399)
+.|..+++..
T Consensus 46 e~l~~alk~e 55 (117)
T 2cpt_A 46 QYFLHVVKYE 55 (117)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHhc
Confidence 3344555555
No 271
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.01 E-value=1.3 Score=43.72 Aligned_cols=66 Identities=9% Similarity=-0.004 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINP---DSAKGYKTRGMAHAMLGHWEEAVHDLHVASKID 215 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p---~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ld 215 (399)
...++..+|..|++.|++..|++.|.++..... .-...++..-.++...++|..+...+.++..+-
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~ 198 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMI 198 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 456788899999999999999999999877543 236788888899999999999999999997653
No 272
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=75.44 E-value=6.4 Score=34.05 Aligned_cols=46 Identities=17% Similarity=0.160 Sum_probs=25.0
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 044737 127 EAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATA 176 (399)
Q Consensus 127 ~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~ 176 (399)
.++..|+++.|++...+. + +...|..+|...+..+++.-|...|.+
T Consensus 14 LAL~lg~l~~A~e~a~~l---~-~~~~Wk~Lg~~AL~~gn~~lAe~cy~~ 59 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL---N-DSITWERLIQEALAQGNASLAEMIYQT 59 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH---C-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHh---C-CHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 345556666665554321 1 345566666666666666665555544
No 273
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=74.90 E-value=0.83 Score=35.78 Aligned_cols=28 Identities=11% Similarity=0.148 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSSSE 281 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~g~ 281 (399)
..++++++.+|++++.++.+|..||.-.
T Consensus 42 a~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 69 (103)
T 1bq0_A 42 AEAKFKEIKEAYEVLTDSQKRAAYDQYG 69 (103)
T ss_dssp HHHHHHHHTTTTTSTTCSHHHHHTTTST
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 3467889999999999999999998644
No 274
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.77 E-value=5.7 Score=40.27 Aligned_cols=69 Identities=9% Similarity=-0.047 Sum_probs=58.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINP-----DSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p-----~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
.+.++..+-..|+..+.|+.|.....++.-... ..+..+|..|.++...++|.+|..+|..|++..|.+
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 588889999999999999999999999853211 125678889999999999999999999999988754
No 275
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=74.15 E-value=3.3 Score=29.29 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=16.7
Q ss_pred hcCCHHHHHHHHHHhhChHHHHHhh-----cCCcHHHHHH
Q 044737 355 AFSDPEVMAALQDVMKNPANLAQHQ-----ANPKVAPIIA 389 (399)
Q Consensus 355 ~~~dp~~~~~~~~~~~np~~~~~~~-----~~p~~~~~~~ 389 (399)
+.++|.|..+-+-|.+||..+..++ +||.+..+|+
T Consensus 7 Lr~~Pqf~~lR~~vq~NP~~L~~lLqql~~~nP~l~~~I~ 46 (61)
T 2f4m_B 7 LRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQIS 46 (61)
T ss_dssp GTTCHHHHHHHHHHHHCGGGHHHHHHHHHHHCHHHHHHHH
T ss_pred HHcChHHHHHHHHHHHCHHHHHHHHHHHHhHCHHHHHHHH
Confidence 3444444444444555555444333 2555555554
No 276
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=73.51 E-value=13 Score=27.21 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP 149 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P 149 (399)
..-...|..++..|++++|+.+|.+||..+|
T Consensus 18 l~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~ 48 (73)
T 3ax2_A 18 LEEIQLGEELLAQGDYEKGVDHLTNAIAVCG 48 (73)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 4556889999999999999999999999988
No 277
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=73.44 E-value=62 Score=30.50 Aligned_cols=30 Identities=20% Similarity=0.300 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP 149 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P 149 (399)
.....|..++..|++.+|+..|...|..-|
T Consensus 104 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~ 133 (320)
T 3mkr_B 104 QRLQLCYQLTTVGKFEEAVEKFRSILLSVP 133 (320)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 356789999999999999999999998765
No 278
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=72.87 E-value=37 Score=32.09 Aligned_cols=104 Identities=19% Similarity=0.052 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C--------HHH--HHHHHHHHHHcCCHHHHHH-----HHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S--------AIM--YATRASVYIKMKKPNAAIR-----DATAAL 178 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~--------a~~--~~nra~a~~~l~~~~~Ai~-----d~~~Al 178 (399)
+.........|..++..|++.+|+..|...|..-| . ..+ +..++.-|+--=..+-+.+ +-.+.+
T Consensus 111 l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~l 190 (325)
T 3mv2_A 111 LDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRML 190 (325)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 34444456689999999999999999999998644 1 111 2222222211000010000 111122
Q ss_pred H---------hCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 179 E---------INPDSAKGYKTRG-MAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 179 ~---------l~p~~~~a~~~~g-~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+ |.|.+...-++.| ...++.++|..|....++.|++.|..
T Consensus 191 ELAAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 240 (325)
T 3mv2_A 191 ELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSG 240 (325)
T ss_dssp HHHHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 2 2232222222333 23567889999999999999998864
No 279
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=72.40 E-value=48 Score=28.73 Aligned_cols=67 Identities=6% Similarity=-0.015 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--h---------------CC-CH-HHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIM--L---------------NP-SA-IMYATRASVYIKMKKPNAAIRDATAAL 178 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~--l---------------~P-~a-~~~~nra~a~~~l~~~~~Ai~d~~~Al 178 (399)
+....-+...+.+.++|..|+..++..|. + +| +- -.|...|..+.+++.-++||..+....
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 34556778889999999999999999992 2 45 33 445667888999999999999999877
Q ss_pred HhCCCC
Q 044737 179 EINPDS 184 (399)
Q Consensus 179 ~l~p~~ 184 (399)
...|-.
T Consensus 142 ~~~~lf 147 (242)
T 3kae_A 142 GKSFLF 147 (242)
T ss_dssp HHCCCH
T ss_pred CCcccc
Confidence 766544
No 280
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.51 E-value=4.1 Score=30.86 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
..++++++.+|++++.++.+|..||.-
T Consensus 49 a~~~f~~i~~Ay~~L~d~~~R~~Yd~~ 75 (92)
T 2dmx_A 49 AEKKFKLVSEAYEVLSDSKKRSLYDRA 75 (92)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 345778899999999999999999843
No 281
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=71.14 E-value=46 Score=31.27 Aligned_cols=92 Identities=13% Similarity=-0.040 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CC---CHHHHHHHHHHHHHcCCH-----------------------
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIML----NP---SAIMYATRASVYIKMKKP----------------------- 167 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l----~P---~a~~~~nra~a~~~l~~~----------------------- 167 (399)
-+.++...+.|.++++|++|++++...... .- -+.+-..+..+|.+.+..
T Consensus 33 hQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r 112 (312)
T 2wpv_A 33 HQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNL 112 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchH
Confidence 356778888899999999999885544432 11 111111222333322211
Q ss_pred ----HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 044737 168 ----NAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLH 209 (399)
Q Consensus 168 ----~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~ 209 (399)
+.|+.+..+.-...-.++..|..+|..|..-+++.+|...|-
T Consensus 113 ~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 113 KDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 122222221111112357788889999999999999988775
No 282
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=69.68 E-value=3.1 Score=30.08 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 256 ERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 256 er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
++++.+.+|.+++.++.+|..||..
T Consensus 46 ~~f~~i~~Ay~~L~d~~~R~~YD~~ 70 (73)
T 2och_A 46 EQFKQISQAYEVLSDEKKRQIYDQG 70 (73)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 5788899999999999999999854
No 283
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=69.60 E-value=10 Score=29.09 Aligned_cols=31 Identities=26% Similarity=0.314 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAI 145 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai 145 (399)
+..|-.+-.++..+++.|+|++||.+..+|.
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3445555556666666666666666655433
No 284
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=69.34 E-value=4.3 Score=30.57 Aligned_cols=26 Identities=12% Similarity=0.175 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
..++++++.+|++++.++.+|..||.
T Consensus 55 ~~~~f~~i~~Ay~~L~d~~~R~~YD~ 80 (88)
T 2cug_A 55 AEDRFIQISKAYEILSNEEKRTNYDH 80 (88)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 45688899999999999999999984
No 285
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=69.16 E-value=33 Score=25.53 Aligned_cols=12 Identities=17% Similarity=-0.069 Sum_probs=5.9
Q ss_pred HHHHHHhhCCcH
Q 044737 207 DLHVASKIDFDE 218 (399)
Q Consensus 207 ~l~~Al~ldp~~ 218 (399)
.|..+++..|+.
T Consensus 48 ~l~~alk~e~d~ 59 (83)
T 2w2u_A 48 VLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHSTTS
T ss_pred HHHHHHHHCCCH
Confidence 344445555544
No 286
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=68.61 E-value=21 Score=29.77 Aligned_cols=40 Identities=25% Similarity=0.018 Sum_probs=32.8
Q ss_pred HHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 178 LEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 178 l~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
+.-++-++..++.+|.||.++|+..+|-..+.+|++---.
T Consensus 118 l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~k 157 (172)
T 1wy6_A 118 LKNNEVSASILVAIANALRRVGDERDATTLLIEACKKGEK 157 (172)
T ss_dssp C--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred hccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhhH
Confidence 3445667999999999999999999999999999886543
No 287
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=68.55 E-value=3.2 Score=33.18 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 256 ERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 256 er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
++++++.+|++++.++.+|..|+.
T Consensus 47 e~f~~I~~AYevL~d~~~R~~~~~ 70 (114)
T 1gh6_A 47 EKMKKMNTLYKKMEDGVKYAHQPD 70 (114)
T ss_dssp TTTHHHHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHHHHHCCHHHHHHhhh
Confidence 378899999999999999999874
No 288
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=68.23 E-value=29 Score=29.41 Aligned_cols=61 Identities=8% Similarity=0.016 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-C------HHHHHH-H--HHHHHHcCCHHHHHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-S------AIMYAT-R--ASVYIKMKKPNAAIRDATAALE 179 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~------a~~~~n-r--a~a~~~l~~~~~Ai~d~~~Al~ 179 (399)
......|..+|+.|+|=+|-+.++.+....+ . ...+.. + |..+++.+++..|...+.+|+.
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3456788999999999999999998887765 3 222222 2 3334455777777777777665
No 289
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=68.21 E-value=36 Score=33.06 Aligned_cols=96 Identities=15% Similarity=0.028 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------------C------------------------H
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIMLNP-----------------------S------------------------A 151 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-----------------------~------------------------a 151 (399)
......|..|.+.+++++-.++++.....-+ + .
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~ 99 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888887777654432211 0 1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--C-C---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 152 IMYATRASVYIKMKKPNAAIRDATAALEINP--D-S---AKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 152 ~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p--~-~---~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
.+-.++|..|+..|+|.+|+..+.+.++--. + . ...|.....+|..++++..+...|.+|...
T Consensus 100 ~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 100 SLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 1223567777777777777776666655311 1 1 345556666677777777777777776554
No 290
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.73 E-value=5 Score=29.38 Aligned_cols=27 Identities=22% Similarity=0.263 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
..++++++.+|++++.++.+|..||.-
T Consensus 46 a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 72 (79)
T 2dn9_A 46 AKEKFSQLAEAYEVLSDEVKRKQYDAY 72 (79)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 356888999999999999999999843
No 291
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=66.77 E-value=17 Score=26.72 Aligned_cols=23 Identities=0% Similarity=-0.010 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 044737 256 ERLRRRAEAQAAYEKAKKEEQSS 278 (399)
Q Consensus 256 er~~~~~~A~~~~~~~~k~~~~d 278 (399)
++++++.+|++++.+..++..++
T Consensus 50 ~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 50 ALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhHHHHHHHh
Confidence 57889999999999999888754
No 292
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.27 E-value=4.5 Score=29.58 Aligned_cols=27 Identities=19% Similarity=0.176 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
..++++++.+|++++.++.+|..||.-
T Consensus 45 ~~~~f~~i~~Ay~~L~d~~~R~~YD~~ 71 (78)
T 2ctp_A 45 ATEAFKAIGTAYAVLSNPEKRKQYDQF 71 (78)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHc
Confidence 346788999999999999999999843
No 293
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.05 E-value=4.2 Score=32.19 Aligned_cols=26 Identities=8% Similarity=0.153 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
..++++++.+|++++.++.+|..||.
T Consensus 59 a~~~f~~i~~Ay~vL~d~~~R~~YD~ 84 (112)
T 2ctq_A 59 AVETFQKLQKAKEILTNEESRARYDH 84 (112)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 45688999999999999999999984
No 294
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=65.73 E-value=34 Score=25.33 Aligned_cols=13 Identities=8% Similarity=-0.135 Sum_probs=6.3
Q ss_pred HHHHHHHhhCCcH
Q 044737 206 HDLHVASKIDFDE 218 (399)
Q Consensus 206 ~~l~~Al~ldp~~ 218 (399)
+.|.++++..|+.
T Consensus 39 e~l~~~lk~e~d~ 51 (83)
T 2v6y_A 39 EVLSQIIVLYPES 51 (83)
T ss_dssp HHHHHHHHHCTTC
T ss_pred HHHHHHHHHCCCH
Confidence 3344455555544
No 295
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=64.43 E-value=27 Score=26.50 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP 149 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P 149 (399)
..++.+...|..+|+.++|.+|+.+|.++..+..
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~te 84 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSD 84 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcccc
Confidence 5678889999999999999999999999987743
No 296
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=64.15 E-value=18 Score=30.80 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCcHHHHHHHHHHhHHHHhHHHHHHHHH
Q 044737 168 NAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEEHRRKYD 242 (399)
Q Consensus 168 ~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~~~~~~~lk~v~~~~~k~~e~~~~ye 242 (399)
..|+..+..+...+|......-++..++..+.+....+..|...+..||. .|..|..++..+....++|.
T Consensus 73 ~~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~-----rL~~ie~RL~~l~~L~RKyg 142 (175)
T 4abx_A 73 GEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPE-----ALDRVEARLSALSKLKNKYG 142 (175)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHH-----HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH-----HHHHHHHHHHHHHHHHHHcC
Confidence 34556666667778777778888888898888888888888877777774 45667777777766666663
No 297
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=63.77 E-value=28 Score=29.10 Aligned_cols=60 Identities=22% Similarity=0.193 Sum_probs=44.4
Q ss_pred HHHHHHH-HHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 121 AKAKAME-AISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEI 180 (399)
Q Consensus 121 ~k~~g~~-~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l 180 (399)
+...|.. +..+|+-++--+.+...+.-++ ++.++..+|.+|-++|+-.+|-+...+|.+-
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 3344433 4466666666666666566677 9999999999999999999999988888764
No 298
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=63.12 E-value=2.2 Score=31.25 Aligned_cols=29 Identities=28% Similarity=0.432 Sum_probs=14.0
Q ss_pred hcCCHHHH-HHHHHH-hhChHHHHHhhcCCc
Q 044737 355 AFSDPEVM-AALQDV-MKNPANLAQHQANPK 383 (399)
Q Consensus 355 ~~~dp~~~-~~~~~~-~~np~~~~~~~~~p~ 383 (399)
+-+||++. ..|++| .+||+.+.-+..||.
T Consensus 22 vqqNP~lL~~lLqqL~~~NPqL~q~I~~n~e 52 (72)
T 1pve_A 22 IQQNPSLLPALLQQIGRENPQLLQQISQHQE 52 (72)
T ss_dssp HTTCGGGHHHHHHHHHTTCHHHHHHHHTTHH
T ss_pred HHHCHHHHHHHHHHHHhHCHHHHHHHHHCHH
Confidence 34455443 344444 235555555555554
No 299
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=63.01 E-value=12 Score=39.05 Aligned_cols=48 Identities=13% Similarity=0.188 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcC
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMK 165 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~ 165 (399)
+.....+|..++..|+|..|.++.+.++..+| +..+...+|.+|.+++
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~ 497 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLG 497 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 45677888888888888888888888888888 8888888888877665
No 300
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=62.43 E-value=48 Score=25.07 Aligned_cols=17 Identities=18% Similarity=0.036 Sum_probs=9.6
Q ss_pred HHHHHHHHHHhhCCcHH
Q 044737 203 EAVHDLHVASKIDFDEE 219 (399)
Q Consensus 203 eA~~~l~~Al~ldp~~~ 219 (399)
.|+..|..+++..++..
T Consensus 40 ~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 40 EGIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHCCCHH
Confidence 34444566666666654
No 301
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.93 E-value=6.9 Score=29.58 Aligned_cols=23 Identities=17% Similarity=0.192 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQ 276 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~ 276 (399)
..++++++.+|++++.++.+|..
T Consensus 65 ~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 65 SEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHHHHCCcccccC
Confidence 34578999999999999987654
No 302
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=61.30 E-value=14 Score=28.52 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP 149 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P 149 (399)
.......|..++..|+++.|+.+|.+||..+|
T Consensus 20 Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 20 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 45667889999999999999999999999877
No 303
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=60.92 E-value=5.5 Score=30.83 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 253 VERERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 253 ~~~er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
...++++++.+|++++.++.+|..||.
T Consensus 41 ~a~~~f~~I~~AY~vL~d~~~R~~YD~ 67 (99)
T 2lgw_A 41 FAEKKFKEVAEAYEVLSDKHKREIYDR 67 (99)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 345688999999999999999999984
No 304
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=60.35 E-value=3.9 Score=29.86 Aligned_cols=27 Identities=22% Similarity=0.255 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
..++++.+.+|.+++.++.+|..||.-
T Consensus 41 ~~~~f~~i~~Ay~~L~d~~~R~~Yd~~ 67 (77)
T 1hdj_A 41 AEEKFKEIAEAYDVLSDPRKREIFDRY 67 (77)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 346788999999999999999999854
No 305
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=59.64 E-value=6.3 Score=30.97 Aligned_cols=26 Identities=15% Similarity=0.226 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
..++++++.+|++++.++.+|..||.
T Consensus 56 a~~~f~~i~~Ay~vL~d~~~R~~YD~ 81 (109)
T 2ctw_A 56 AADKFKEINNAHAILTDATKRNIYDK 81 (109)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 45689999999999999999999984
No 306
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=59.07 E-value=20 Score=27.87 Aligned_cols=28 Identities=18% Similarity=0.181 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 252 KVERERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 252 k~~~er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
....++++++.+|.+++.++.+|..||.
T Consensus 56 ~~a~~~f~~i~~AY~~L~d~~~R~~YD~ 83 (109)
T 2qsa_A 56 LLAEERFRVIATAYETLKDDEAKTNYDY 83 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 3456688899999999999999999974
No 307
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=58.58 E-value=6.6 Score=33.87 Aligned_cols=25 Identities=12% Similarity=0.154 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 256 ERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 256 er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
++++++.+|+++++++.+|+.||.-
T Consensus 50 e~F~~I~~AYevLsdp~kR~~YD~~ 74 (174)
T 2pf4_E 50 EKMKKMNTLYKKMEDGVKYAHQPDF 74 (174)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTSCGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHhcc
Confidence 4788899999999999999999854
No 308
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=58.00 E-value=58 Score=33.63 Aligned_cols=121 Identities=10% Similarity=-0.040 Sum_probs=69.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC-C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 044737 123 AKAMEAISEGKLDEAIELSTEAIMLNP-S----AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAM 197 (399)
Q Consensus 123 ~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~----a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~ 197 (399)
..+...+...+.+.|+..|........ + ..++..++..++..+...++...+.+++....+... .-+++.....
T Consensus 219 ~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~r~Alr 297 (618)
T 1qsa_A 219 AVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSL-IERRVRMALG 297 (618)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHH-HHHHHHHHHH
Confidence 334555566688999999887665444 2 222223333333334355677777776665444333 3344444456
Q ss_pred cCCHHHHHHHHHHHHhhCCc-HHHHHHHHHHhHHHHhHHHHHHHHHHH
Q 044737 198 LGHWEEAVHDLHVASKIDFD-EEIAAVLKKVEPNALRIEEHRRKYDRL 244 (399)
Q Consensus 198 lg~~eeA~~~l~~Al~ldp~-~~~~~~lk~v~~~~~k~~e~~~~ye~l 244 (399)
.++|..|...+...-.-... .....++.++...+++..+.+..|+.+
T Consensus 298 ~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~ 345 (618)
T 1qsa_A 298 TGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQL 345 (618)
T ss_dssp HTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 79999999988765443222 234567777665555555555544443
No 309
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.77 E-value=31 Score=27.54 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 167 PNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 167 ~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
|..|+...++||.++-. |.-...+..|...+..|.+++.+..
T Consensus 19 h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 45666666666666531 2222223334455556667777665
No 310
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=51.70 E-value=23 Score=35.16 Aligned_cols=85 Identities=7% Similarity=-0.064 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHHHhCC---C--------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----------CCH
Q 044737 133 KLDEAIELSTEAIMLNP---S--------------AIMYATRASVYIKMKKPNAAIRDATAALEINP----------DSA 185 (399)
Q Consensus 133 ~~~~Ai~~y~~Ai~l~P---~--------------a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p----------~~~ 185 (399)
..+.|.....++..++- + .-+-.++..+|+++++..-|-..+...-.... ..+
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 45667777777776622 1 12234667889999998887776643222211 125
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhh-CCc
Q 044737 186 KGYKTRGMAHAMLGHWEEAVHDLHVASKI-DFD 217 (399)
Q Consensus 186 ~a~~~~g~a~~~lg~~eeA~~~l~~Al~l-dp~ 217 (399)
..+|.+|..+...++|.+|..++..|++. .|.
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 67888999999999999999999999988 664
No 311
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.68 E-value=5.6 Score=29.34 Aligned_cols=28 Identities=25% Similarity=0.261 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 253 VERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 253 ~~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
...++++.+.+|.+++.++.+|..||.-
T Consensus 48 ~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 75 (82)
T 2ej7_A 48 EAERRFKQVAEAYEVLSDAKKRDIYDRY 75 (82)
T ss_dssp HHHHHHHHHHHHHHHHSSTTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHc
Confidence 4556889999999999999999999843
No 312
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=51.17 E-value=33 Score=23.34 Aligned_cols=37 Identities=24% Similarity=0.177 Sum_probs=32.0
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML 147 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l 147 (399)
+++.+..|+.+-.-|..++.-.+...|++.+.+|+++
T Consensus 13 ~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~l 49 (53)
T 2rkl_A 13 RASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 4566788888889999999999999999999999875
No 313
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=51.11 E-value=3.6 Score=35.40 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=19.1
Q ss_pred hhc-CCHHHHHHHHHHhhChHHHHHhhc-----CCcHHHHHH
Q 044737 354 AAF-SDPEVMAALQDVMKNPANLAQHQA-----NPKVAPIIA 389 (399)
Q Consensus 354 ~~~-~dp~~~~~~~~~~~np~~~~~~~~-----~p~~~~~~~ 389 (399)
.++ ++|.|.++-+-|.+||+.+..++. ||.+.++|+
T Consensus 27 ~L~~~~Pqf~qlRq~vqqNPqlL~~lLqqig~~NPqL~qlI~ 68 (171)
T 2qsf_X 27 SIGLTVEDLLSLRQVVSGNPEALAPLLENISARYPQLREHIM 68 (171)
T ss_dssp -CCCCHHHHHHHHHHHHTCGGGHHHHHHHHHHHCTTHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHCHHHHHHHHHHHHhhCHHHHHHHH
Confidence 345 566666555555666655544432 666555543
No 314
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=50.04 E-value=74 Score=23.39 Aligned_cols=14 Identities=21% Similarity=0.173 Sum_probs=7.0
Q ss_pred HHHHHHHhhCCcHH
Q 044737 206 HDLHVASKIDFDEE 219 (399)
Q Consensus 206 ~~l~~Al~ldp~~~ 219 (399)
..|..+++..++..
T Consensus 41 e~l~~a~k~e~~~~ 54 (85)
T 2v6x_A 41 DYLMLALKYEKNPK 54 (85)
T ss_dssp HHHHHHHHHCCCHH
T ss_pred HHHHHHHHhCCCHH
Confidence 33444555555553
No 315
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=48.67 E-value=15 Score=26.71 Aligned_cols=36 Identities=17% Similarity=0.428 Sum_probs=22.5
Q ss_pred hccCCCHHHHh------hcCCHHHHHHHHHHhhChHHHHHhhcCC
Q 044737 344 SKILNDPELMA------AFSDPEVMAALQDVMKNPANLAQHQANP 382 (399)
Q Consensus 344 ~~~~~dpe~~~------~~~dp~~~~~~~~~~~np~~~~~~~~~p 382 (399)
.-+-+||+++. .-+||++... |.+||..+..+++.|
T Consensus 20 ~~vqqNP~lL~~lLqqL~~~NPqL~q~---I~~n~e~Fl~ll~e~ 61 (72)
T 1pve_A 20 QIIQQNPSLLPALLQQIGRENPQLLQQ---ISQHQEHFIQMLNEP 61 (72)
T ss_dssp HHHTTCGGGHHHHHHHHHTTCHHHHHH---HHTTHHHHHHHHHSC
T ss_pred HHHHHCHHHHHHHHHHHHhHCHHHHHH---HHHCHHHHHHHHcCC
Confidence 34456777665 4467766654 466777777777655
No 316
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.26 E-value=69 Score=35.49 Aligned_cols=88 Identities=13% Similarity=-0.019 Sum_probs=66.7
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---h--------------------
Q 044737 125 AMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALE---I-------------------- 180 (399)
Q Consensus 125 g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~---l-------------------- 180 (399)
...++..+.|+-|.+ .+...| +....+-+|.||+..|++++|...|.+|-. .
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~ 894 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHH 894 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTS
T ss_pred HHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccc
Confidence 345667777766544 335667 766678899999999999999999988621 0
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 181 NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 181 ~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
....+..|+....++...+.++.+++..+.|+....
T Consensus 895 ~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 895 QNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 930 (1139)
T ss_dssp CCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCC
T ss_pred cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 112346778888888899999999999999998764
No 317
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.83 E-value=26 Score=35.46 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP--------SAIMYATRASVYIKMKKPNAAIRDATAALEINPDS 184 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P--------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~ 184 (399)
+.-+...-..|+..+.|+.|..+..++. .| .+.+++..|.++.-..+|.+|.+++..|++..|.+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 3444456667888999999999999885 33 26778889999999999999999999999987754
No 318
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=46.61 E-value=73 Score=24.16 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC--C---HHHHHHHHHH--HHHcCCHHHHHHHHHHHHH
Q 044737 122 KAKAMEAISEGKLDEAIELSTEAIMLNP--S---AIMYATRASV--YIKMKKPNAAIRDATAALE 179 (399)
Q Consensus 122 k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P--~---a~~~~nra~a--~~~l~~~~~Ai~d~~~Al~ 179 (399)
...|..+|+.|+|=+|-+.++..-...| . ...+..+|.+ +.+.|++ |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 3467778888888888888888777766 2 2222233333 3334554 5555555554
No 319
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=46.59 E-value=78 Score=31.00 Aligned_cols=62 Identities=8% Similarity=-0.140 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hC---CC--CHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALE-IN---PD--SAKGYKTRGMAHAMLGHWEEAVHDLHVAS 212 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~-l~---p~--~~~a~~~~g~a~~~lg~~eeA~~~l~~Al 212 (399)
+.+...+|..|...|+|.+|...+..... .. .. -...|..-.+.|...++|..|...+.++.
T Consensus 137 arl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45667889999999999999998877643 21 11 14578888899999999999999999874
No 320
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=46.15 E-value=13 Score=32.20 Aligned_cols=27 Identities=4% Similarity=0.009 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 254 ERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 254 ~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
..++++++.+|++++.++.+|..||.-
T Consensus 41 ~~~~f~~i~~Ay~~L~~~~~r~~yd~~ 67 (210)
T 3apq_A 41 AHGDFLKINRAYEVLKDEDLRKKYDKY 67 (210)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 456888999999999999999999853
No 321
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.81 E-value=48 Score=36.01 Aligned_cols=29 Identities=10% Similarity=-0.132 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 186 KGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 186 ~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
.+|+....++...+-|+-+++..+.|+..
T Consensus 898 ~YY~hV~~LFE~~~a~~~vi~fA~lAI~~ 926 (950)
T 4gq2_M 898 CYYLHLSKKLFEESAYIDALEFSLLADAS 926 (950)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Confidence 46666677777777777777777777754
No 322
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=44.59 E-value=38 Score=29.77 Aligned_cols=27 Identities=4% Similarity=-0.134 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 044737 252 KVERERLRRRAEAQAAYEKAKKEEQSS 278 (399)
Q Consensus 252 k~~~er~~~~~~A~~~~~~~~k~~~~d 278 (399)
+...++++++.+|+++++++.+|..|+
T Consensus 87 ~~a~~~f~~In~AY~vLsdp~~R~~Yd 113 (207)
T 3bvo_A 87 DFSEKHSTLVNDAYKTLLAPLSRGLYL 113 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 334568889999999999999999997
No 323
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=44.34 E-value=1.5e+02 Score=32.12 Aligned_cols=48 Identities=17% Similarity=0.149 Sum_probs=25.0
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 044737 126 MEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAA 177 (399)
Q Consensus 126 ~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~A 177 (399)
..+...+.|+-|.+ -+...| ++..-+-+|.+|+.+|++++|...+.+|
T Consensus 818 ~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kA 866 (950)
T 4gq2_M 818 EKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 866 (950)
T ss_dssp HHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34444555543322 223444 4444455666666666666666666554
No 324
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=44.06 E-value=20 Score=29.80 Aligned_cols=27 Identities=4% Similarity=-0.005 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 044737 252 KVERERLRRRAEAQAAYEKAKKEEQSS 278 (399)
Q Consensus 252 k~~~er~~~~~~A~~~~~~~~k~~~~d 278 (399)
+...++++++.+|.+++.++.+|+.||
T Consensus 53 ~~a~~~f~~i~~Ay~~L~dp~~R~~Yd 79 (155)
T 2l6l_A 53 EECVQKFIEIDQAWKILGNEETKREYD 79 (155)
T ss_dssp HHHHHHHHHHHHHHHHSSSHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 345568888999999999999999998
No 325
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=42.89 E-value=15 Score=23.40 Aligned_cols=16 Identities=44% Similarity=0.528 Sum_probs=11.4
Q ss_pred HHHHHHHHhhChHHHHHhhcCC
Q 044737 361 VMAALQDVMKNPANLAQHQANP 382 (399)
Q Consensus 361 ~~~~~~~~~~np~~~~~~~~~p 382 (399)
|+++||++ +++||+|+
T Consensus 24 vrqALQdL------lseY~~~~ 39 (40)
T 4e17_B 24 VRQALQDL------LSEYMGNA 39 (40)
T ss_dssp HHHHHHHH------HHHHHC--
T ss_pred HHHHHHHH------HHHHhccC
Confidence 78888887 77888775
No 326
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=42.10 E-value=60 Score=28.26 Aligned_cols=52 Identities=12% Similarity=-0.036 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHH-----HHHHHHHHHHcCCH
Q 044737 116 EAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIM-----YATRASVYIKMKKP 167 (399)
Q Consensus 116 ~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~-----~~nra~a~~~l~~~ 167 (399)
+.+.-++-.|..++..++|.+|-.++.+|++..| .... +..+--|.+-+|++
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCC
Confidence 4567788899999999999999999999999988 5322 22333334456664
No 327
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=41.92 E-value=41 Score=34.99 Aligned_cols=46 Identities=13% Similarity=0.051 Sum_probs=30.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCC
Q 044737 155 ATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGH 200 (399)
Q Consensus 155 ~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~~lg~ 200 (399)
..+|...+..|+|.-|...++.++..+|++..|...++.+|..+|.
T Consensus 453 ~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 453 LEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 3455555666677777777777777777776666666666666653
No 328
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=41.89 E-value=3.5e+02 Score=29.94 Aligned_cols=73 Identities=12% Similarity=-0.064 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh--CCcHHHHH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEI----NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKI--DFDEEIAA 222 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l----~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l--dp~~~~~~ 222 (399)
....|..+-.+|++.|+.++|...+....+. -.-++..|..+-..|.+.|++++|...|.+-.+. .|+--+..
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYn 204 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYA 204 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 3456788888999999999999999764432 2346789999999999999999999999988764 57764433
No 329
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=40.81 E-value=15 Score=27.70 Aligned_cols=28 Identities=4% Similarity=-0.031 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044737 253 VERERLRRRAEAQAAYEKAKKEEQSSSS 280 (399)
Q Consensus 253 ~~~er~~~~~~A~~~~~~~~k~~~~d~g 280 (399)
...++++++.+|++++.++.+|..||..
T Consensus 60 ~~~~~f~~i~~Ay~~L~d~~~R~~YD~~ 87 (94)
T 1wjz_A 60 ECMQKFIEIDQAWKILGNEETKKKYDLQ 87 (94)
T ss_dssp HHHHHHHHHHHHHHHHSSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 3456888899999999999999999843
No 330
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=40.20 E-value=61 Score=31.77 Aligned_cols=29 Identities=17% Similarity=0.117 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALE 179 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~ 179 (399)
..++..+|.+|+-.++|.+|+..|+++|.
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45666667777777777777777777664
No 331
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=40.12 E-value=60 Score=31.80 Aligned_cols=47 Identities=9% Similarity=-0.089 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 044737 167 PNAAIRDATAALEINPD--------SAKGYKTRGMAHAMLGHWEEAVHDLHVASK 213 (399)
Q Consensus 167 ~~~Ai~d~~~Al~l~p~--------~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ 213 (399)
|+..+.|++.|+.+-|. ..-|+..+|++|+..++|++|+..+++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 46678888888887553 245788899999999999999999888875
No 332
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=40.04 E-value=1.2e+02 Score=25.42 Aligned_cols=58 Identities=5% Similarity=-0.135 Sum_probs=43.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHH--HHhcCCHHHHHHHHHHHHh
Q 044737 156 TRASVYIKMKKPNAAIRDATAALEINPDS------AKGYKT-RGMA--HAMLGHWEEAVHDLHVASK 213 (399)
Q Consensus 156 nra~a~~~l~~~~~Ai~d~~~Al~l~p~~------~~a~~~-~g~a--~~~lg~~eeA~~~l~~Al~ 213 (399)
..+..++..++|-+|-+.++.+....+.. .+++.. ++.+ +...|++.-|...+.+|+.
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34566678899999999999998876654 345555 4433 4567999999999999976
No 333
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.28 E-value=49 Score=26.34 Aligned_cols=14 Identities=14% Similarity=0.242 Sum_probs=8.6
Q ss_pred HHHHHHHHHHhCCC
Q 044737 170 AIRDATAALEINPD 183 (399)
Q Consensus 170 Ai~d~~~Al~l~p~ 183 (399)
+|..+.++|.+..+
T Consensus 48 GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 48 GIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHSSCCC
T ss_pred HHHHHHHhcccccc
Confidence 44456777777653
No 334
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=37.61 E-value=66 Score=31.58 Aligned_cols=29 Identities=21% Similarity=0.167 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALE 179 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~ 179 (399)
..++.-+|.+|+-.++|.+|+..|+++|.
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 56666777777777777777777777775
No 335
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=37.43 E-value=63 Score=31.71 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 044737 167 PNAAIRDATAALEINPDS--------AKGYKTRGMAHAMLGHWEEAVHDLHVASK 213 (399)
Q Consensus 167 ~~~Ai~d~~~Al~l~p~~--------~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ 213 (399)
|+..+.|++.|+.+-|.. .-|+..+|++|+..++|++|+..+++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 356788888888765532 45788899999999999999998888775
No 336
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=36.71 E-value=75 Score=27.59 Aligned_cols=61 Identities=23% Similarity=0.128 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-------hCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 119 AEAKAKAMEAISEGKLDEAIELSTEAIM-------LNP--SAIMYATRASVYIKMKKPNAAIRDATAALE 179 (399)
Q Consensus 119 ~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~-------l~P--~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~ 179 (399)
......+|.+++.|+...|++.+.-+=. +-| ...-..++|..++..++|.+|-..+..+..
T Consensus 109 ~aAI~~AN~~Lk~Gd~~~A~~~LklAgvdv~~~~allPL~qT~~~V~~A~~ll~~gk~yeAn~aLk~Aed 178 (191)
T 3dza_A 109 ESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYLMPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEE 178 (191)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCEEEEEEEEEEHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHcCCchhhhhhhCChHhHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 4667789999999999999988765421 235 567788999999999999998877776654
No 337
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=36.06 E-value=66 Score=27.22 Aligned_cols=27 Identities=4% Similarity=-0.104 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 044737 253 VERERLRRRAEAQAAYEKAKKEEQSSS 279 (399)
Q Consensus 253 ~~~er~~~~~~A~~~~~~~~k~~~~d~ 279 (399)
...+++.++.+|+++++++.+|..|+.
T Consensus 46 ~a~~~f~~In~AY~vL~dp~~R~~Yd~ 72 (171)
T 1fpo_A 46 AAVQQSATINQAWQTLRHPLMRAEYLL 72 (171)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 445688899999999999999999984
No 338
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=36.05 E-value=43 Score=24.72 Aligned_cols=27 Identities=22% Similarity=0.101 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIM 146 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~ 146 (399)
+....|..+.-.|+|+.|+.+|+-++.
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 334455556666666666666665554
No 339
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=36.03 E-value=75 Score=31.54 Aligned_cols=29 Identities=7% Similarity=0.041 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALE 179 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~ 179 (399)
..++.-+|.+|+-.++|.+|+..|+++|.
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 34555555555555666666666655554
No 340
>3g36_A Protein DPY-30 homolog; X-type four-helix bundle, nucleus, nuclear protein; 1.20A {Homo sapiens}
Probab=35.97 E-value=29 Score=23.84 Aligned_cols=27 Identities=22% Similarity=0.343 Sum_probs=22.6
Q ss_pred HHHHHHHHHhhCCCCCCccchhhHHHHHHHc
Q 044737 8 ELKQFIDQCKSNPSILADPSLSFFRDYLESL 38 (399)
Q Consensus 8 ~l~~~~~~~~~~p~~l~~~~~~f~~~~~~~~ 38 (399)
.++.+.++||..|. .-+.|+.+||-.-
T Consensus 21 L~~GL~~lak~rP~----DPi~~LA~~Ll~~ 47 (55)
T 3g36_A 21 LLQGMAVLAKERPP----NPIEFLASYLLKN 47 (55)
T ss_dssp HHHHHHHHHHHCCS----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC----CHHHHHHHHHHHh
Confidence 47788999999998 4588999999763
No 341
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=35.87 E-value=77 Score=23.61 Aligned_cols=22 Identities=14% Similarity=0.095 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 044737 253 VERERLRRRAEAQAAYEKAKKE 274 (399)
Q Consensus 253 ~~~er~~~~~~A~~~~~~~~k~ 274 (399)
...++++.+.+|++++.+...+
T Consensus 55 ~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 55 IANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhhccc
Confidence 4567899999999999987544
No 342
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=35.76 E-value=75 Score=31.56 Aligned_cols=48 Identities=21% Similarity=0.157 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 167 PNAAIRDATAALEINPD-----------SAKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 167 ~~~Ai~d~~~Al~l~p~-----------~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
|+..+.|++.|+.+-|. ..-|+..+|++|+..++|++|+..+++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 45678888888876543 2357888999999999999999999988764
No 343
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=35.73 E-value=90 Score=22.62 Aligned_cols=28 Identities=21% Similarity=0.173 Sum_probs=18.0
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 191 RGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 191 ~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+|..+...|++++|+..|-+|+.+.|.-
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 5666666666666666666666666654
No 344
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=35.57 E-value=76 Score=27.54 Aligned_cols=37 Identities=11% Similarity=-0.145 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAK 186 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~ 186 (399)
.+..++-+|..++..++|.+|..++..|+...|....
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~ 49 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQ 49 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHH
Confidence 3567888999999999999999999999999887643
No 345
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=35.40 E-value=1.1e+02 Score=24.45 Aligned_cols=35 Identities=20% Similarity=0.095 Sum_probs=30.2
Q ss_pred HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 113 EKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML 147 (399)
Q Consensus 113 e~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l 147 (399)
-.++.|......|..++..|.|+.|+-...+|++.
T Consensus 11 ~~~~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~Ek 45 (135)
T 1o3u_A 11 HHMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEK 45 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH
Confidence 35788999999999999999999998888888765
No 346
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=35.29 E-value=64 Score=32.27 Aligned_cols=12 Identities=42% Similarity=0.310 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHH
Q 044737 167 PNAAIRDATAAL 178 (399)
Q Consensus 167 ~~~Ai~d~~~Al 178 (399)
|++|+..++++-
T Consensus 455 Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 455 YKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhh
Confidence 556666666554
No 347
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=35.09 E-value=68 Score=31.57 Aligned_cols=48 Identities=13% Similarity=0.014 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 167 PNAAIRDATAALEINPDS--------AKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 167 ~~~Ai~d~~~Al~l~p~~--------~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
|+..+.|++.|+.+-|.. .-|+..+|++|+..++|++|+..+++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 466788899888865532 457888999999999999999999988764
No 348
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=34.84 E-value=2e+02 Score=24.10 Aligned_cols=88 Identities=16% Similarity=0.134 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHhC--CCCHHHHHHHHH
Q 044737 120 EAKAKAMEAISEGKLDEAIELSTEAIMLNP---SAIMYATRASVYIKMKKPNA-AIRDATAALEIN--PDSAKGYKTRGM 193 (399)
Q Consensus 120 ~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P---~a~~~~nra~a~~~l~~~~~-Ai~d~~~Al~l~--p~~~~a~~~~g~ 193 (399)
.....++.+|-..+|...|..+. ..+| ....-+-+|.+|++..++.. .....-..|.++ |++-..|
T Consensus 10 ~a~i~a~~afl~~dYs~VI~~L~---~~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkSde~yL~YW----- 81 (161)
T 2ynq_A 10 EAYIQSTELFLQNKYSDVITTLE---DYAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKTDEQYMLYW----- 81 (161)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHT---TSCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTSCHHHHHHH-----
T ss_pred HHHHHHHHHHHHhhHHHHHHHHh---cCChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccCCHHHHHHH-----
Confidence 45567888999999999998876 3666 67888889999999988753 222333333333 2233333
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 194 AHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 194 a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+|...|++++|+.. |..|+-..
T Consensus 82 IyiGRg~~~eAlDi---A~~L~D~q 103 (161)
T 2ynq_A 82 IYIGRSQSEEALEL---ARTIEDRD 103 (161)
T ss_dssp HHHHHTCHHHHHHH---HHHHTCHH
T ss_pred HHHcCCchHHHHHH---HHhcCcHH
Confidence 67778999999764 44555443
No 349
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=34.76 E-value=1.7e+02 Score=26.03 Aligned_cols=62 Identities=11% Similarity=0.059 Sum_probs=44.0
Q ss_pred HHHHHHHHHHH-----HHcCCHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 044737 118 AAEAKAKAMEA-----ISEGKLDEAIELSTEAIML--------NP-SAIMYATRASVYI-KMKKPNAAIRDATAALE 179 (399)
Q Consensus 118 a~~~k~~g~~~-----~~~g~~~~Ai~~y~~Ai~l--------~P-~a~~~~nra~a~~-~l~~~~~Ai~d~~~Al~ 179 (399)
+--++.+|..| |..|+-+.|...|..|+.+ +| ..-+..|.+..|+ -+++++.|...+.+|+.
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 44555555443 4467788899999999875 45 5666677776665 46788999988888866
No 350
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=34.69 E-value=67 Score=27.25 Aligned_cols=26 Identities=4% Similarity=0.058 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC
Q 044737 253 VERERLRRRAEAQAAYEKAKKEEQSS 278 (399)
Q Consensus 253 ~~~er~~~~~~A~~~~~~~~k~~~~d 278 (399)
...+++..+.+|++++.++.+|..|+
T Consensus 49 ~a~~~f~~In~AY~vL~dp~~R~~Yd 74 (174)
T 3hho_A 49 MAVQQAAQINDAYQTLKDPLRRAEYL 74 (174)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 34568889999999999999999998
No 351
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=34.57 E-value=1.6e+02 Score=22.68 Aligned_cols=59 Identities=19% Similarity=0.158 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 044737 114 KREAAAEAKAKAMEAISEGKLDEAIELSTEAIMLNPSAIMYATRASVYIKMKKPNAAIRDATAALE 179 (399)
Q Consensus 114 ~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~ 179 (399)
.+..|...+..+...+..++|..|..+..++. +...+|.+.....+-.+++...++.|.
T Consensus 30 El~~A~dKl~~A~~Am~~~~y~~Ar~lAEqAe-------~DArLAeAka~~~Ka~~~~~el~~~I~ 88 (98)
T 4fm3_A 30 ELKLAQDKYAAAQIAMTAESYKKARLLAEQAE-------LDARLAESKVLTQKSKDQLGELDKSLK 88 (98)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH-------HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999988865 345555555555555566666655554
No 352
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=33.98 E-value=67 Score=31.66 Aligned_cols=47 Identities=19% Similarity=0.134 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 044737 135 DEAIELSTEAIMLNP---------SAIMYATRASVYIKMKKPNAAIRDATAALEIN 181 (399)
Q Consensus 135 ~~Ai~~y~~Ai~l~P---------~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~ 181 (399)
+..+..++.|+.+-| ...++..+|.+|+-.++|.+|+..|+++|...
T Consensus 177 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 177 EQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 344455555555433 36788889999999999999999999999753
No 353
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=33.55 E-value=3.6e+02 Score=26.54 Aligned_cols=67 Identities=10% Similarity=0.039 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHhcCCHHHHH
Q 044737 132 GKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEI-----NPDSAKGYKTRGMAHAMLGHWEEAV 205 (399)
Q Consensus 132 g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l-----~p~~~~a~~~~g~a~~~lg~~eeA~ 205 (399)
.+|.-|+..+-..=++.| . |+ ..++..|.+||.. +-.++..|..+|-.|++.++|.+|+
T Consensus 274 ~rYPmALgnLgDLEe~~pt~--------------gr-~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl 338 (550)
T 3u84_A 274 ERYPMALGNLADLEELEPTP--------------GR-PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREAL 338 (550)
T ss_dssp TTCHHHHHHHHHHHHHSCCT--------------TC-CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHH
T ss_pred hhCchhhcchhhHhhcCCCC--------------CC-CCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHH
Confidence 356666666655555555 1 00 0134444444443 3456677888999999999999999
Q ss_pred HHHHHHHh
Q 044737 206 HDLHVASK 213 (399)
Q Consensus 206 ~~l~~Al~ 213 (399)
..+..|-.
T Consensus 339 ~~WA~Aa~ 346 (550)
T 3u84_A 339 QAWADTAT 346 (550)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887754
No 354
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=33.02 E-value=3.4e+02 Score=26.16 Aligned_cols=44 Identities=16% Similarity=-0.003 Sum_probs=33.0
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 044737 170 AIRDATAALEI-----NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASK 213 (399)
Q Consensus 170 Ai~d~~~Al~l-----~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ 213 (399)
++..|.+||.. +-.++..|..+|-.|++.+++.+|++.+..|-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 45555555543 345667788899999999999999999887754
No 355
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=38.47 E-value=9.5 Score=39.95 Aligned_cols=50 Identities=18% Similarity=0.214 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCH
Q 044737 118 AAEAKAKAMEAISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKP 167 (399)
Q Consensus 118 a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~ 167 (399)
+.....+|..++..|+|..|+++.+.++..+| +..+...+|.+|.+++--
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 45666778888888888888888888888888 877888888888777643
No 356
>2izx_A CAMP-dependent protein kinase type II-alpha regulatory subunit; CAMP-binding, phosphorylation, nucleotide-binding, PKA, CAMP, anchor, kinase, acetylation; 1.3A {Homo sapiens} PDB: 2hwn_A
Probab=31.87 E-value=28 Score=21.95 Aligned_cols=28 Identities=18% Similarity=0.439 Sum_probs=22.2
Q ss_pred HHHHHHH-HHHhhCCCCCCccchhhHHHHHHHc
Q 044737 7 KELKQFI-DQCKSNPSILADPSLSFFRDYLESL 38 (399)
Q Consensus 7 ~~l~~~~-~~~~~~p~~l~~~~~~f~~~~~~~~ 38 (399)
..|+.|+ ++|+.+|+ .-+.|..+|++++
T Consensus 9 ~lL~~~~~~vl~~qP~----di~~f~a~yF~~l 37 (41)
T 2izx_A 9 ELLQGYTVEVLRQQPP----DLVEFAVEYFTRL 37 (41)
T ss_dssp HHHHHHHHHHHHHCCS----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC----CHHHHHHHHHHHH
Confidence 4566665 68999998 6688999999875
No 357
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=30.91 E-value=1.6e+02 Score=21.60 Aligned_cols=26 Identities=15% Similarity=0.143 Sum_probs=21.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHh
Q 044737 188 YKTRGMAHAMLGHWEEAVHDLHVASK 213 (399)
Q Consensus 188 ~~~~g~a~~~lg~~eeA~~~l~~Al~ 213 (399)
...+|+=|..+|+|+.|+.+|+-++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 45677888889999999999888765
No 358
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=30.25 E-value=2.9e+02 Score=24.44 Aligned_cols=49 Identities=10% Similarity=0.066 Sum_probs=37.7
Q ss_pred HHHHHHHHHHH--hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 169 AAIRDATAALE--INPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 169 ~Ai~d~~~Al~--l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
.+...|.-... +--..+..|-..|..+...|+|.+|...|+.+++..-.
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 44455555444 34567888888999999999999999999999987633
No 359
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=28.45 E-value=2.5e+02 Score=23.20 Aligned_cols=48 Identities=10% Similarity=-0.095 Sum_probs=37.9
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCc
Q 044737 170 AIRDATAALEI--NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFD 217 (399)
Q Consensus 170 Ai~d~~~Al~l--~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp~ 217 (399)
+...|.-.... --..+..|-..|..+...|++.+|...|+.+++..-.
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 56666555443 3466888888999999999999999999999987643
No 360
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=27.75 E-value=1.2e+02 Score=30.26 Aligned_cols=30 Identities=10% Similarity=0.195 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 185 AKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 185 ~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
.-|+..+|++|+..++|++|+..+++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 346777888888888888888888888764
No 361
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=27.48 E-value=3.1e+02 Score=23.87 Aligned_cols=66 Identities=6% Similarity=-0.059 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 150 SAIMYATRASVYIKMKKPNAAIRDATAALEI--NPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 150 ~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l--~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
...+|...+..+ .......+...|.-.... --..+..|-..|..+...|+|.+|...|+.+++..-
T Consensus 79 YLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 79 FLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 355555555443 123356777777766554 456788888899999999999999999999998763
No 362
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=27.45 E-value=1.4e+02 Score=26.34 Aligned_cols=67 Identities=18% Similarity=0.108 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--hcCCHHHHHHHHHHHHhhCCcH
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA--MLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~--~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
...+..|..+.+.. +-..|+..|..||..+|.++.-.+..-..|. ...+-.-.+..|+-+...||..
T Consensus 93 ~etH~~RV~a~Ln~-rrr~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dpe~ 161 (219)
T 3pmr_A 93 VETHATRVIALIND-QRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEK 161 (219)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHH
Confidence 44555566655443 3477888888888888777544333322232 2234444677888888888865
No 363
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=27.43 E-value=1.2e+02 Score=30.14 Aligned_cols=23 Identities=17% Similarity=0.219 Sum_probs=8.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Q 044737 155 ATRASVYIKMKKPNAAIRDATAA 177 (399)
Q Consensus 155 ~nra~a~~~l~~~~~Ai~d~~~A 177 (399)
..+|.+|+..++|.+|+..|+++
T Consensus 186 allarv~L~~~~~~~A~~~a~~v 208 (517)
T 3qnk_A 186 ALKSRVELYDKRYEDVIKSCAEV 208 (517)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333344333333333
No 364
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=27.28 E-value=13 Score=34.03 Aligned_cols=33 Identities=33% Similarity=0.290 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 115 REAAAEAKAKAMEAISEGKLDEAIELSTEAIML 147 (399)
Q Consensus 115 ~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l 147 (399)
...|..+..+|..+=+.|+|.+|+.+|.+||.+
T Consensus 20 ~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 20 STAAATVLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ---------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344556666666666667777777776666654
No 365
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=27.12 E-value=94 Score=30.55 Aligned_cols=47 Identities=19% Similarity=0.166 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhCC-------------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 168 NAAIRDATAALEINP-------------DSAKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 168 ~~Ai~d~~~Al~l~p-------------~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
+..+.|++.|+.+-| +..-|+-.+|++|+..++|++|+...++++..
T Consensus 161 ~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 161 QQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 556777777766432 22357888999999999999999999998864
No 366
>2kyg_A CAMP-dependent protein kinase type II-alpha regul subunit; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=26.82 E-value=38 Score=22.55 Aligned_cols=28 Identities=18% Similarity=0.439 Sum_probs=22.5
Q ss_pred HHHHHHH-HHHhhCCCCCCccchhhHHHHHHHc
Q 044737 7 KELKQFI-DQCKSNPSILADPSLSFFRDYLESL 38 (399)
Q Consensus 7 ~~l~~~~-~~~~~~p~~l~~~~~~f~~~~~~~~ 38 (399)
..|+.|+ ++|+.+|. .-+.|..+|++.+
T Consensus 17 ~lL~~~~~evlr~qP~----Di~~Faa~yF~~l 45 (50)
T 2kyg_A 17 ELLQGYTVEVLRQQPP----DLVEFAVEYFTRL 45 (50)
T ss_dssp HHHHHHHHHHHHHCCS----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC----CHHHHHHHHHHHH
Confidence 4567775 68999998 5689999999875
No 367
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=26.66 E-value=2e+02 Score=25.27 Aligned_cols=67 Identities=9% Similarity=0.053 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--hcCCHHHHHHHHHHHHhhCCcH
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHA--MLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l~p~~~~a~~~~g~a~~--~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
...+..|..+.+.. +-..|+..|..||..+|.++.-.+..-..|. ...+-.-.+..|+-+...||..
T Consensus 86 ~etH~qRV~a~ln~-rrr~Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti~hy~Hv~~~dpe~ 154 (211)
T 3umh_A 86 VETHMARVEAMLND-RRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKK 154 (211)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCHHH
Confidence 34455555555432 3466777788888777776543332222222 2223444677777777777765
No 368
>2izy_A CAMP-dependent protein kinase regulatory subunit II; D/D, RII, PKA, acetylation, transferase, CAMP- binding, phosphorylation, nucleotide-binding; 2.2A {Mus musculus} SCOP: a.31.1.1 PDB: 1l6e_A 1r2a_A 2drn_A 2h9r_A
Probab=26.65 E-value=41 Score=22.87 Aligned_cols=28 Identities=18% Similarity=0.443 Sum_probs=22.8
Q ss_pred HHHHHHH-HHHhhCCCCCCccchhhHHHHHHHc
Q 044737 7 KELKQFI-DQCKSNPSILADPSLSFFRDYLESL 38 (399)
Q Consensus 7 ~~l~~~~-~~~~~~p~~l~~~~~~f~~~~~~~~ 38 (399)
..|+.|+ ++|+++|. .-+.|.++|++++
T Consensus 12 ~lL~~f~~evlr~qP~----Di~~Faa~YF~~L 40 (54)
T 2izy_A 12 ELLQGYTVEVLRQQPP----DLVDFAVEYFTRL 40 (54)
T ss_dssp HHHHHHHHHHHHHCCS----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC----CHHHHHHHHHHHH
Confidence 4577775 68999999 5689999999876
No 369
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=26.48 E-value=1.1e+02 Score=23.48 Aligned_cols=28 Identities=21% Similarity=0.173 Sum_probs=21.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCcH
Q 044737 191 RGMAHAMLGHWEEAVHDLHVASKIDFDE 218 (399)
Q Consensus 191 ~g~a~~~lg~~eeA~~~l~~Al~ldp~~ 218 (399)
+|..+...|+++.|+..|-+|+.+.|.-
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 6777777788888888788888877765
No 370
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=25.47 E-value=43 Score=23.25 Aligned_cols=16 Identities=44% Similarity=0.528 Sum_probs=12.0
Q ss_pred HHHHHHHHhhChHHHHHhhcCC
Q 044737 361 VMAALQDVMKNPANLAQHQANP 382 (399)
Q Consensus 361 ~~~~~~~~~~np~~~~~~~~~p 382 (399)
|+++||++ +++||+|+
T Consensus 43 vrqALQdL------lsEY~~~~ 58 (59)
T 4e18_B 43 VRQALQDL------LSEYMGNA 58 (59)
T ss_dssp HHHHHHHH------HHHHHCC-
T ss_pred HHHHHHHH------HHHHhccC
Confidence 78888887 77888775
No 371
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=25.29 E-value=1.9e+02 Score=28.99 Aligned_cols=12 Identities=33% Similarity=0.659 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHH
Q 044737 201 WEEAVHDLHVAS 212 (399)
Q Consensus 201 ~eeA~~~l~~Al 212 (399)
|++|+..|+++-
T Consensus 455 Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 455 YKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhh
Confidence 444555555444
No 372
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=24.21 E-value=1.2e+02 Score=27.05 Aligned_cols=14 Identities=43% Similarity=0.529 Sum_probs=6.8
Q ss_pred cCCHHHHHHHHHHH
Q 044737 164 MKKPNAAIRDATAA 177 (399)
Q Consensus 164 l~~~~~Ai~d~~~A 177 (399)
+++++.|+..+.+|
T Consensus 186 l~~~~~A~~lAk~a 199 (234)
T 2br9_A 186 LNSPDRACRLAKAA 199 (234)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 45555555544443
No 373
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=23.15 E-value=3.3e+02 Score=22.76 Aligned_cols=47 Identities=9% Similarity=-0.056 Sum_probs=37.1
Q ss_pred HHHHHHHHHH--hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 044737 170 AIRDATAALE--INPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDF 216 (399)
Q Consensus 170 Ai~d~~~Al~--l~p~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ldp 216 (399)
+...|..... +--..+..|...|..+...|+|.+|...|+.+++..-
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A 127 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKA 127 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 4445554444 3456788888999999999999999999999998773
No 374
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=23.14 E-value=17 Score=35.70 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=0.0
Q ss_pred HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 113 EKREAAAEAKAKAMEAISEGKLDEAIELSTEAIML 147 (399)
Q Consensus 113 e~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~Ai~l 147 (399)
+..+.|..+..+|..+=+.|+|++|+.+|..||.+
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~ 40 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 40 (444)
T ss_dssp -----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34567788888999999999999999999999876
No 375
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.58 E-value=1.4e+02 Score=29.22 Aligned_cols=30 Identities=10% Similarity=-0.026 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 044737 151 AIMYATRASVYIKMKKPNAAIRDATAALEI 180 (399)
Q Consensus 151 a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l 180 (399)
..++.-+|.+|+-.++|.+|+..|+++|..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 456677788888888888888888888864
No 376
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.55 E-value=1.4e+02 Score=29.31 Aligned_cols=48 Identities=19% Similarity=0.083 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhCCC-----------------------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 044737 167 PNAAIRDATAALEINPD-----------------------SAKGYKTRGMAHAMLGHWEEAVHDLHVASKI 214 (399)
Q Consensus 167 ~~~Ai~d~~~Al~l~p~-----------------------~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~l 214 (399)
|+..+.|++.|+.+=|. ..-|+..+|++|+..++|++|+..+++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 35567788888775442 1347788999999999999999999998854
No 377
>3cx5_F Cytochrome B-C1 complex subunit 6; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.28.1.1 PDB: 3cxh_F* 1ezv_H* 1kb9_F* 1p84_F* 2ibz_H* 1kyo_F*
Probab=22.54 E-value=16 Score=30.31 Aligned_cols=12 Identities=0% Similarity=0.066 Sum_probs=0.0
Q ss_pred hhhHHHHHHHcC
Q 044737 28 LSFFRDYLESLH 39 (399)
Q Consensus 28 ~~f~~~~~~~~g 39 (399)
..||.++++|+.
T Consensus 7 ~d~~~dl~~s~~ 18 (146)
T 3cx5_F 7 GEYWEQLKITVV 18 (146)
T ss_dssp ------------
T ss_pred HHHHHHHHHHcC
Confidence 457888888864
No 378
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=22.02 E-value=1.8e+02 Score=21.73 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=27.2
Q ss_pred CHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 044737 111 TDEKREAAAEAKAKAMEAISEGKLDEAIELSTE 143 (399)
Q Consensus 111 ~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~~ 143 (399)
..+-++.|..+...|..+++.|++..|+.++.=
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isY 60 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVW 60 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456677888999999999999999998888653
No 379
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=21.51 E-value=1.2e+02 Score=23.70 Aligned_cols=29 Identities=17% Similarity=0.147 Sum_probs=14.5
Q ss_pred hcCCHHHHHHHHHHhhChHHHHHhhcCCc
Q 044737 355 AFSDPEVMAALQDVMKNPANLAQHQANPK 383 (399)
Q Consensus 355 ~~~dp~~~~~~~~~~~np~~~~~~~~~p~ 383 (399)
+..++.|..++..|..+|....++..+..
T Consensus 30 y~~~~~~k~~i~~irr~p~~we~~~~~~~ 58 (109)
T 3l4h_A 30 FTSSTCLKHMILKVRRDARNFERYQHNRD 58 (109)
T ss_dssp HHHCSHHHHHHHHHHHCTHHHHHHTTCHH
T ss_pred HhcchHHHHHHHHHhcCCcChhhhcCcCC
Confidence 34445555555555555555555544433
No 380
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.40 E-value=4.9e+02 Score=24.68 Aligned_cols=87 Identities=8% Similarity=-0.039 Sum_probs=58.3
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC----------------CC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------C
Q 044737 127 EAISEGKLDEAIELSTEAIMLN----------------PS--AIMYATRASVYIKMKKPNAAIRDATAALEI-------N 181 (399)
Q Consensus 127 ~~~~~g~~~~Ai~~y~~Ai~l~----------------P~--a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l-------~ 181 (399)
..-...++.+|++.+++..... .. ..+....+..|+..++...|....+++-.. +
T Consensus 85 ~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~ 164 (393)
T 4b4t_O 85 SLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIP 164 (393)
T ss_dssp HHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCcc
Confidence 3445678999999887653321 12 344556677888999999998888777542 2
Q ss_pred C-CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 044737 182 P-DSAKGYKTRGMAHAMLGHWEEAVHDLHVASK 213 (399)
Q Consensus 182 p-~~~~a~~~~g~a~~~lg~~eeA~~~l~~Al~ 213 (399)
| -....|..++..|...++|..+..++-.++.
T Consensus 165 ~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 165 LRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 2 1244555667777888999888777666654
No 381
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=21.23 E-value=34 Score=32.99 Aligned_cols=13 Identities=46% Similarity=0.450 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHH
Q 044737 4 EKVKELKQFIDQC 16 (399)
Q Consensus 4 ~~~~~l~~~~~~~ 16 (399)
..|..||..|...
T Consensus 28 ~TV~~LK~~I~~~ 40 (368)
T 1oqy_A 28 ETVKVLKEKIEAE 40 (368)
T ss_dssp CBHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHH
Confidence 3578888888773
No 382
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=21.15 E-value=1.9e+02 Score=21.63 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=25.5
Q ss_pred cCHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 044737 110 VTDEKREAAAEAKAKAMEAISEGKLDEAIELST 142 (399)
Q Consensus 110 ~~ee~~~~a~~~k~~g~~~~~~g~~~~Ai~~y~ 142 (399)
...+-++.|..+...|..+++.|++..|+.++.
T Consensus 31 ~a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~is 63 (87)
T 2pmr_A 31 DEEAVVERALNYRDDSVYYLEKGDHITSFGCIT 63 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 345556778888888888888888888887765
No 383
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=21.13 E-value=1.5e+02 Score=26.93 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHh-----CC----CHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 044737 136 EAIELSTEAIML-----NP----SAIMYATRASVYIK-MKKPNAAIRDATAAL 178 (399)
Q Consensus 136 ~Ai~~y~~Ai~l-----~P----~a~~~~nra~a~~~-l~~~~~Ai~d~~~Al 178 (399)
.|...|.+|+.+ .| ...+..|.+..|+. +++++.|+..+.+|+
T Consensus 153 ~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 153 STLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 455666666643 22 22333344444433 456666655555543
No 384
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=20.45 E-value=6.1e+02 Score=24.84 Aligned_cols=67 Identities=10% Similarity=0.047 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHhcCCHHHHH
Q 044737 132 GKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEI-----NPDSAKGYKTRGMAHAMLGHWEEAV 205 (399)
Q Consensus 132 g~~~~Ai~~y~~Ai~l~P-~a~~~~nra~a~~~l~~~~~Ai~d~~~Al~l-----~p~~~~a~~~~g~a~~~lg~~eeA~ 205 (399)
.+|.-|+-.+-..-++.| .. + ..++..|.+||.. +-.+...|..+|-.+++.++|.+|+
T Consensus 259 ~~YPmALgnLgDLEei~pt~g--------------r-p~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl 323 (489)
T 4gq4_A 259 ERYPMALGNLADLEELEPTPG--------------R-PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREAL 323 (489)
T ss_dssp TTCHHHHHHHHHHHHHSCCTT--------------S-CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHH
T ss_pred hhcchhhhcccCHhhcCCCCC--------------C-CCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHH
Confidence 456667666666666665 10 0 1123344444442 3345677888899999999999999
Q ss_pred HHHHHHHh
Q 044737 206 HDLHVASK 213 (399)
Q Consensus 206 ~~l~~Al~ 213 (399)
+.+..|-.
T Consensus 324 ~~wa~aa~ 331 (489)
T 4gq4_A 324 QAWADTAT 331 (489)
T ss_dssp HHHHHHHH
T ss_pred HHhhhhhh
Confidence 99988754
No 385
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=20.31 E-value=1.2e+02 Score=29.85 Aligned_cols=26 Identities=23% Similarity=0.414 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHH
Q 044737 187 GYKTRGMAHAMLGHWEEAVHDLHVAS 212 (399)
Q Consensus 187 a~~~~g~a~~~lg~~eeA~~~l~~Al 212 (399)
|+..+|++|+..++|++|+..+++++
T Consensus 182 A~allarvyL~~~~~~~A~~~a~~vi 207 (481)
T 3jq1_A 182 AYAALGKIYVYEENWQEAINVLEPLT 207 (481)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34444444444455555544444443
No 386
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=20.26 E-value=1.3e+02 Score=29.62 Aligned_cols=23 Identities=22% Similarity=0.271 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Q 044737 153 MYATRASVYIKMKKPNAAIRDAT 175 (399)
Q Consensus 153 ~~~nra~a~~~l~~~~~Ai~d~~ 175 (399)
++..+|.+|+..++|.+|+..|+
T Consensus 182 A~allarvyL~~~~~~~A~~~a~ 204 (481)
T 3jq1_A 182 AYAALGKIYVYEENWQEAINVLE 204 (481)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHG
T ss_pred HHHHHHHHHHHHhHHHHHHHHHH
Confidence 33344444444444444444443
Done!