Query 044741
Match_columns 196
No_of_seqs 176 out of 1246
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 06:18:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044741.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044741hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02176 putative pectinestera 100.0 7E-55 1.5E-59 381.6 22.7 189 4-196 7-202 (340)
2 PLN02432 putative pectinestera 100.0 5.8E-55 1.3E-59 376.0 21.3 164 33-196 4-167 (293)
3 PLN02497 probable pectinestera 100.0 9.9E-55 2.1E-59 379.5 20.8 158 39-196 31-196 (331)
4 PLN02634 probable pectinestera 100.0 2E-54 4.3E-59 380.2 20.4 163 34-196 50-228 (359)
5 PLN02665 pectinesterase family 100.0 7.9E-54 1.7E-58 378.1 22.3 158 39-196 67-233 (366)
6 PLN02773 pectinesterase 100.0 3.7E-53 8E-58 368.3 20.2 159 38-196 3-176 (317)
7 PLN02304 probable pectinestera 100.0 3.9E-53 8.4E-58 374.0 20.4 158 39-196 74-241 (379)
8 PLN02682 pectinesterase family 100.0 9.5E-53 2.1E-57 371.0 20.3 158 39-196 68-242 (369)
9 PLN02671 pectinesterase 100.0 5.5E-52 1.2E-56 365.0 20.4 161 36-196 55-232 (359)
10 PLN02488 probable pectinestera 100.0 3E-52 6.4E-57 378.6 19.2 157 40-196 197-358 (509)
11 PLN02480 Probable pectinestera 100.0 1.8E-51 3.8E-56 361.0 22.9 157 40-196 48-211 (343)
12 PLN02933 Probable pectinestera 100.0 4.8E-52 1E-56 380.6 19.8 159 38-196 216-379 (530)
13 PLN02201 probable pectinestera 100.0 5.6E-52 1.2E-56 380.1 19.6 159 38-196 204-367 (520)
14 PLN02916 pectinesterase family 100.0 1.3E-51 2.9E-56 375.3 20.4 159 38-196 185-351 (502)
15 PLN02197 pectinesterase 100.0 2.3E-51 4.9E-56 380.5 20.1 158 39-196 274-438 (588)
16 PLN02713 Probable pectinestera 100.0 3.1E-51 6.7E-56 379.2 20.1 157 40-196 250-414 (566)
17 PLN02995 Probable pectinestera 100.0 2.4E-51 5.2E-56 378.1 18.9 157 40-196 223-386 (539)
18 PLN02990 Probable pectinestera 100.0 3.4E-51 7.4E-56 379.2 19.3 158 39-196 258-421 (572)
19 PLN02170 probable pectinestera 100.0 3.8E-51 8.3E-56 373.9 19.2 158 39-196 224-387 (529)
20 PLN02217 probable pectinestera 100.0 3.5E-51 7.6E-56 382.7 19.3 158 39-196 249-411 (670)
21 PLN02301 pectinesterase/pectin 100.0 4.3E-51 9.4E-56 376.4 19.2 158 39-196 235-397 (548)
22 PLN02708 Probable pectinestera 100.0 5.7E-51 1.2E-55 376.8 18.9 158 39-196 240-404 (553)
23 PLN02416 probable pectinestera 100.0 5.1E-51 1.1E-55 376.1 18.5 157 40-196 230-391 (541)
24 PLN02484 probable pectinestera 100.0 7.2E-51 1.6E-55 378.0 19.7 159 38-196 270-434 (587)
25 PLN02506 putative pectinestera 100.0 9.3E-51 2E-55 373.8 19.5 159 38-196 230-393 (537)
26 PLN02745 Putative pectinestera 100.0 1.1E-50 2.3E-55 377.2 19.3 158 39-196 284-446 (596)
27 PLN03043 Probable pectinestera 100.0 1.4E-50 3.1E-55 373.1 19.5 157 40-196 223-387 (538)
28 PLN02314 pectinesterase 100.0 2.2E-50 4.8E-55 375.2 19.6 159 38-196 276-439 (586)
29 PF01095 Pectinesterase: Pecti 100.0 9.2E-51 2E-55 351.9 15.5 155 42-196 2-161 (298)
30 PLN02468 putative pectinestera 100.0 2.4E-50 5.2E-55 373.4 18.6 158 39-196 257-419 (565)
31 PRK10531 acyl-CoA thioesterase 100.0 1.2E-49 2.5E-54 355.6 22.3 157 40-196 80-296 (422)
32 PLN02313 Pectinesterase/pectin 100.0 4.2E-50 9.1E-55 373.2 18.7 158 39-196 274-436 (587)
33 COG4677 PemB Pectin methyleste 100.0 4.8E-40 1E-44 282.1 17.2 147 50-196 92-279 (405)
34 PLN02698 Probable pectinestera 100.0 7.3E-39 1.6E-43 293.2 15.0 127 39-196 213-344 (497)
35 TIGR03805 beta_helix_1 paralle 99.6 5.8E-15 1.3E-19 129.2 15.2 118 55-185 1-130 (314)
36 TIGR03808 RR_plus_rpt_1 twin-a 99.2 4.2E-10 9.1E-15 101.9 13.6 118 53-183 55-178 (455)
37 PF07602 DUF1565: Protein of u 99.1 2.3E-09 4.9E-14 90.9 14.1 126 50-184 13-159 (246)
38 PF14592 Chondroitinas_B: Chon 99.1 7.2E-10 1.6E-14 100.0 10.1 119 53-184 5-144 (425)
39 COG3420 NosD Nitrous oxidase a 99.0 1.1E-08 2.4E-13 89.5 13.6 125 37-186 16-144 (408)
40 PF12708 Pectate_lyase_3: Pect 98.2 5.2E-05 1.1E-09 61.5 13.9 110 53-168 19-140 (225)
41 PLN02188 polygalacturonase/gly 97.6 0.0013 2.7E-08 59.9 12.7 70 121-190 162-256 (404)
42 PLN03010 polygalacturonase 97.1 0.075 1.6E-06 48.5 18.0 53 119-171 162-237 (409)
43 PLN02671 pectinesterase 96.7 0.029 6.3E-07 50.3 11.8 60 115-181 178-237 (359)
44 PLN02793 Probable polygalactur 96.6 0.45 9.7E-06 43.9 18.9 60 121-180 184-268 (443)
45 COG3866 PelB Pectate lyase [Ca 96.6 0.21 4.5E-06 43.9 15.7 69 90-168 101-180 (345)
46 PLN02480 Probable pectinestera 96.4 0.073 1.6E-06 47.5 12.2 60 117-183 159-218 (343)
47 smart00656 Amb_all Amb_all dom 96.0 0.1 2.3E-06 42.5 10.4 88 81-181 10-112 (190)
48 PLN02201 probable pectinestera 95.8 0.16 3.5E-06 47.7 11.8 61 114-181 312-372 (520)
49 PF01696 Adeno_E1B_55K: Adenov 95.8 0.45 9.8E-06 43.1 14.2 110 53-182 55-177 (386)
50 PLN02773 pectinesterase 95.7 0.085 1.8E-06 46.6 9.5 61 114-181 121-181 (317)
51 PLN02416 probable pectinestera 95.7 0.17 3.6E-06 47.9 11.7 61 114-181 336-396 (541)
52 PLN02155 polygalacturonase 95.4 1.3 2.8E-05 40.3 16.2 61 121-181 152-237 (394)
53 PLN02933 Probable pectinestera 95.4 0.24 5.3E-06 46.6 11.7 61 114-181 324-384 (530)
54 PF01095 Pectinesterase: Pecti 95.3 0.14 3.1E-06 44.7 9.2 60 116-182 108-167 (298)
55 PLN02218 polygalacturonase ADP 95.1 1.1 2.4E-05 41.2 14.8 61 121-181 199-284 (431)
56 PLN03003 Probable polygalactur 94.9 1.2 2.7E-05 41.3 14.5 60 121-180 145-229 (456)
57 PLN02708 Probable pectinestera 94.9 0.21 4.5E-06 47.3 9.6 61 114-181 349-409 (553)
58 smart00722 CASH Domain present 94.6 0.89 1.9E-05 33.7 11.0 99 76-181 3-112 (146)
59 PLN02995 Probable pectinestera 94.6 0.2 4.3E-06 47.3 8.8 61 114-181 331-391 (539)
60 PF00544 Pec_lyase_C: Pectate 94.6 0.1 2.2E-06 42.9 6.1 104 76-191 8-137 (200)
61 PLN02634 probable pectinestera 94.5 0.16 3.5E-06 45.6 7.5 61 115-182 174-234 (359)
62 PLN02170 probable pectinestera 94.5 0.26 5.5E-06 46.4 9.1 63 114-183 332-394 (529)
63 PLN02916 pectinesterase family 94.4 0.33 7.1E-06 45.5 9.7 61 114-181 296-356 (502)
64 PLN02176 putative pectinestera 94.4 0.17 3.8E-06 45.1 7.5 61 115-182 148-208 (340)
65 PLN02506 putative pectinestera 94.4 0.24 5.2E-06 46.8 8.8 62 114-182 338-399 (537)
66 PLN02304 probable pectinestera 94.4 0.34 7.3E-06 43.8 9.3 61 115-182 187-247 (379)
67 PLN02713 Probable pectinestera 94.4 0.28 6E-06 46.6 9.2 59 115-180 360-418 (566)
68 PLN02497 probable pectinestera 94.4 0.19 4E-06 44.7 7.6 60 115-181 142-201 (331)
69 PLN02217 probable pectinestera 94.3 0.26 5.6E-06 47.7 9.0 61 114-181 356-416 (670)
70 PLN02990 Probable pectinestera 94.3 0.25 5.5E-06 47.0 8.8 61 114-181 366-426 (572)
71 TIGR03805 beta_helix_1 paralle 94.2 0.82 1.8E-05 40.2 11.3 65 120-184 83-152 (314)
72 PLN02314 pectinesterase 94.1 0.34 7.5E-06 46.2 9.3 61 114-181 384-444 (586)
73 PLN02484 probable pectinestera 94.0 0.32 6.9E-06 46.4 8.9 61 114-181 379-439 (587)
74 PLN02432 putative pectinestera 94.0 0.24 5.1E-06 43.3 7.5 61 114-181 112-172 (293)
75 PLN02301 pectinesterase/pectin 94.0 0.37 8.1E-06 45.6 9.2 60 114-180 342-401 (548)
76 PLN02745 Putative pectinestera 93.9 0.4 8.7E-06 45.8 9.4 60 114-180 391-450 (596)
77 PLN02468 putative pectinestera 93.8 0.38 8.2E-06 45.7 8.9 61 114-181 364-424 (565)
78 PLN02197 pectinesterase 93.8 0.45 9.8E-06 45.4 9.4 60 114-180 383-442 (588)
79 PLN02682 pectinesterase family 93.7 0.24 5.3E-06 44.6 7.1 60 115-181 188-247 (369)
80 PLN02698 Probable pectinestera 93.7 0.38 8.3E-06 45.0 8.7 60 115-181 290-349 (497)
81 PLN02313 Pectinesterase/pectin 93.7 0.39 8.5E-06 45.8 8.8 60 114-180 381-440 (587)
82 PLN02665 pectinesterase family 93.5 0.24 5.1E-06 44.7 6.8 62 114-182 178-239 (366)
83 PLN02488 probable pectinestera 93.5 0.55 1.2E-05 44.0 9.3 60 115-181 304-363 (509)
84 PLN03043 Probable pectinestera 93.5 0.52 1.1E-05 44.5 9.3 48 114-167 332-379 (538)
85 KOG1777 Putative Zn-finger pro 93.4 1.6 3.4E-05 40.4 11.7 54 50-107 30-88 (625)
86 PF05048 NosD: Periplasmic cop 92.9 3.2 6.9E-05 34.2 12.2 40 144-183 103-144 (236)
87 TIGR03808 RR_plus_rpt_1 twin-a 92.1 3.9 8.5E-05 37.9 12.5 65 88-162 113-178 (455)
88 COG5434 PGU1 Endopygalactoruna 91.7 0.59 1.3E-05 44.2 7.0 58 122-181 269-340 (542)
89 PRK10531 acyl-CoA thioesterase 91.0 1 2.2E-05 41.3 7.7 61 115-182 230-302 (422)
90 PF13229 Beta_helix: Right han 89.9 0.65 1.4E-05 34.8 4.7 63 117-185 25-90 (158)
91 PF12541 DUF3737: Protein of u 87.1 6.2 0.00014 34.1 9.2 41 147-190 191-231 (277)
92 COG5434 PGU1 Endopygalactoruna 82.4 2.2 4.8E-05 40.4 4.8 63 122-188 246-313 (542)
93 PF00295 Glyco_hydro_28: Glyco 78.1 5.6 0.00012 34.9 5.8 32 150-181 151-184 (326)
94 COG4677 PemB Pectin methyleste 77.8 11 0.00024 33.7 7.3 64 117-181 215-284 (405)
95 PF13229 Beta_helix: Right han 77.5 9.6 0.00021 28.2 6.3 63 116-184 46-113 (158)
96 PHA00407 phage lambda Rz1-like 74.9 3.4 7.3E-05 29.0 2.7 37 8-47 31-67 (84)
97 PLN02188 polygalacturonase/gly 74.5 20 0.00043 32.8 8.4 63 121-184 185-280 (404)
98 PLN02218 polygalacturonase ADP 72.9 16 0.00035 33.6 7.5 63 121-184 222-317 (431)
99 PF05048 NosD: Periplasmic cop 70.7 40 0.00087 27.6 8.8 63 118-185 61-124 (236)
100 TIGR03804 para_beta_helix para 69.1 13 0.00028 22.4 4.2 39 145-183 2-42 (44)
101 PLN03003 Probable polygalactur 64.2 33 0.00072 31.9 7.6 63 121-184 168-263 (456)
102 PLN02793 Probable polygalactur 63.5 46 0.001 30.8 8.4 64 121-185 207-303 (443)
103 PLN02155 polygalacturonase 58.1 35 0.00075 31.1 6.6 63 121-184 175-270 (394)
104 PRK11023 outer membrane lipopr 56.6 32 0.00069 27.9 5.6 9 90-98 77-85 (191)
105 TIGR03352 VI_chp_3 type VI sec 50.9 32 0.0007 26.8 4.5 8 22-29 12-19 (146)
106 PRK10123 wcaM putative colanic 49.9 1.9E+02 0.0041 25.8 12.5 62 71-134 58-133 (464)
107 PRK09752 adhesin; Provisional 47.3 3.1E+02 0.0067 28.9 11.7 71 114-185 112-194 (1250)
108 PF12273 RCR: Chitin synthesis 44.8 12 0.00025 28.5 1.1 13 8-20 1-13 (130)
109 PLN03010 polygalacturonase 43.4 1.1E+02 0.0024 28.0 7.5 63 121-184 187-282 (409)
110 PF03718 Glyco_hydro_49: Glyco 42.0 2.4E+02 0.0052 27.1 9.4 62 122-187 328-396 (582)
111 PRK12450 foldase protein PrsA; 41.7 39 0.00084 29.5 4.1 25 1-28 1-25 (309)
112 PF00295 Glyco_hydro_28: Glyco 41.3 75 0.0016 27.8 5.9 66 118-188 95-168 (326)
113 PF12541 DUF3737: Protein of u 41.2 1.5E+02 0.0032 25.8 7.4 13 172-184 195-207 (277)
114 COG4594 FecB ABC-type Fe3+-cit 40.8 63 0.0014 28.2 5.1 25 9-33 5-29 (310)
115 TIGR03850 bind_CPR_0540 carboh 39.1 1E+02 0.0022 27.3 6.5 43 20-62 14-57 (437)
116 PRK14864 putative biofilm stre 39.0 1.6E+02 0.0035 21.8 8.2 36 50-85 60-101 (104)
117 PRK15396 murein lipoprotein; P 38.8 31 0.00066 24.3 2.4 19 11-29 6-24 (78)
118 PF07172 GRP: Glycine rich pro 38.5 22 0.00047 25.9 1.7 12 13-24 13-24 (95)
119 PF08139 LPAM_1: Prokaryotic m 36.3 30 0.00066 19.1 1.6 21 4-27 4-24 (25)
120 PRK10871 nlpD lipoprotein NlpD 36.2 41 0.0009 29.8 3.4 27 1-27 1-27 (319)
121 PF14592 Chondroitinas_B: Chon 34.9 1.7E+02 0.0037 27.1 7.2 27 142-168 215-241 (425)
122 COG3866 PelB Pectate lyase [Ca 34.3 1.2E+02 0.0027 27.0 5.9 41 142-182 116-165 (345)
123 TIGR00247 conserved hypothetic 33.6 1.1E+02 0.0023 27.2 5.7 23 37-61 37-59 (342)
124 PRK10598 lipoprotein; Provisio 33.4 2E+02 0.0044 23.5 6.8 55 11-86 4-59 (186)
125 COG3218 ABC-type uncharacteriz 33.4 36 0.00077 28.3 2.3 26 1-28 3-28 (205)
126 PRK00059 prsA peptidylprolyl i 33.2 60 0.0013 28.2 3.9 39 8-46 5-43 (336)
127 PRK10378 inactive ferrous ion 32.3 1.1E+02 0.0023 27.9 5.4 21 60-80 80-100 (375)
128 PF12708 Pectate_lyase_3: Pect 31.1 1E+02 0.0022 24.2 4.8 38 148-185 183-222 (225)
129 COG3521 Predicted component of 31.1 1.3E+02 0.0027 24.1 5.1 52 12-74 6-57 (159)
130 TIGR03042 PS_II_psbQ_bact phot 30.8 62 0.0013 25.4 3.2 25 8-33 2-26 (142)
131 smart00710 PbH1 Parallel beta- 30.6 74 0.0016 15.7 2.7 18 151-168 3-21 (26)
132 COG1974 LexA SOS-response tran 30.4 3.1E+02 0.0067 22.6 7.8 52 139-190 143-199 (201)
133 PRK10626 hypothetical protein; 28.8 1.7E+02 0.0036 25.0 5.7 18 8-25 3-20 (239)
134 PRK12473 hypothetical protein; 28.0 1.1E+02 0.0025 25.3 4.4 56 18-80 13-68 (198)
135 TIGR01098 3A0109s03R phosphate 25.4 1.2E+02 0.0027 24.4 4.4 21 9-29 3-23 (254)
136 PF12421 DUF3672: Fibronectin 24.7 1.1E+02 0.0025 23.4 3.7 11 124-134 6-16 (136)
137 PF10460 Peptidase_M30: Peptid 24.1 66 0.0014 29.2 2.6 25 69-94 339-363 (366)
138 COG0725 ModA ABC-type molybdat 23.4 1.2E+02 0.0025 25.9 3.9 44 10-62 4-47 (258)
139 TIGR03061 pip_yhgE_Nterm YhgE/ 23.2 2.1E+02 0.0046 22.0 5.1 49 37-87 42-105 (164)
140 PF03077 VacA2: Putative vacuo 22.9 1.2E+02 0.0026 20.3 3.0 27 110-136 27-54 (60)
141 PF03211 Pectate_lyase: Pectat 22.9 4.6E+02 0.0099 22.0 8.7 50 118-171 78-127 (215)
142 COG4771 FepA Outer membrane re 22.5 2.2E+02 0.0047 28.0 5.8 15 50-64 65-79 (699)
143 COG2182 MalE Maltose-binding p 22.5 1.7E+02 0.0037 27.0 5.0 60 18-79 16-78 (420)
144 PF13617 Lipoprotein_19: YnbE- 22.3 1.4E+02 0.003 19.9 3.2 17 18-34 8-24 (59)
145 PF11839 DUF3359: Protein of u 22.1 87 0.0019 23.0 2.4 20 9-29 3-22 (96)
146 TIGR02722 lp_ uncharacterized 22.1 1.4E+02 0.003 24.1 4.0 10 20-29 12-21 (189)
147 PF11119 DUF2633: Protein of u 21.0 99 0.0021 20.6 2.3 17 5-21 7-23 (59)
148 TIGR03524 GldJ gliding motilit 20.9 1.8E+02 0.0039 27.9 4.8 10 71-80 61-70 (559)
149 PRK04168 molybdate ABC transpo 20.1 2.2E+02 0.0047 25.1 5.1 20 9-28 6-25 (334)
150 TIGR02803 ExbD_1 TonB system t 20.1 3.6E+02 0.0078 19.7 6.2 7 69-75 49-55 (122)
No 1
>PLN02176 putative pectinesterase
Probab=100.00 E-value=7e-55 Score=381.63 Aligned_cols=189 Identities=34% Similarity=0.497 Sum_probs=164.5
Q ss_pred cccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeE
Q 044741 4 YSQNVSILFVASTIVFASITATCGSTATIPKDFSTAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKI 83 (196)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v 83 (196)
||-.|+. |.+.||+-.+ +-+|+...+ .++..+.+++|++||+|+|+|||+||+++|+++++|++|+|+||+|+|+|
T Consensus 7 ~~~~~~~-~~~~~~~~~~-~~~~~~~~~--~~~~~~~~i~Va~dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~GvY~EkV 82 (340)
T PLN02176 7 HSFCYSY-FKVCLLVMTL-AYGSAEYDA--ASSQIAKTIIVNPNDARYFKTVQSAIDSIPLQNQNWIRILIQNGIYREKV 82 (340)
T ss_pred hhhhHHH-HHHHHHHHHH-hhccccccc--cccccCceEEECCCCCCCccCHHHHHhhchhcCCceEEEEECCcEEEEEE
Confidence 4444543 4444434333 345542222 23455668899999999999999999999999889999999999999999
Q ss_pred EEcCCCCcEEEecCCCCCeEEEcCCCCCccccceEEeecCcEEEEEeEEEecCCC-------CCceEEEEEeCCcEEEEc
Q 044741 84 IVPANKPFITISGTKASRTKITWSDGGSILDSATLTVLASHFVARSLTIQNTYGS-------YGKAVALRVSADRAAFYG 156 (196)
Q Consensus 84 ~I~~~k~~itl~G~~~~~t~I~~~~~~~t~~sat~~v~a~~~~~~nlti~Ns~g~-------~~qa~Al~v~~d~~~~~~ 156 (196)
.||+.||+|+|+|++++.|+|+++++..+..++||.+.+++|+++||||+|+++. .+||+||++.+||++|++
T Consensus 83 ~Ip~~k~~vtl~G~g~~~TiIt~~~~~~t~~saT~~v~a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~gDr~~f~~ 162 (340)
T PLN02176 83 TIPKEKGYIYMQGKGIEKTIIAYGDHQATDTSATFTSYASNIIITGITFKNTYNIASNSSRPTKPAVAARMLGDKYAIID 162 (340)
T ss_pred EECCCCccEEEEEcCCCceEEEEeCCcccccceEEEEECCCEEEEeeEEEeCCCccCCCCCCccceEEEEecCccEEEEc
Confidence 9999999999999999999999998888889999999999999999999999852 359999999999999999
Q ss_pred cEEeeceeEEEeCCCceeEecCEEEccceeEecCcceeeC
Q 044741 157 CRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANSLFE 196 (196)
Q Consensus 157 c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a~f~ 196 (196)
|+|+|+|||||++.|||||++|+|||+||||||+|+++||
T Consensus 163 C~f~G~QDTLy~~~gRqyf~~CyIeG~VDFIFG~a~a~Fe 202 (340)
T PLN02176 163 SSFDGFQDTLFDGKGRHYYKRCVISGGIDFIFGYAQSIFE 202 (340)
T ss_pred cEEecccceeEeCCcCEEEEecEEEecccEEecCceEEEe
Confidence 9999999999999999999999999999999999999997
No 2
>PLN02432 putative pectinesterase
Probab=100.00 E-value=5.8e-55 Score=375.97 Aligned_cols=164 Identities=75% Similarity=1.195 Sum_probs=158.1
Q ss_pred CCCCCCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCCCc
Q 044741 33 PKDFSTAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGGSI 112 (196)
Q Consensus 33 ~~~~~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~~t 112 (196)
+...+.+.+++|+++|+|+|+|||+||+++|.++.+|++|+|+||+|+|+|.||++||+|+|+|+++++|+|+|+++..+
T Consensus 4 ~~~~~~~~~~~Va~~Gsg~f~TIq~Aida~p~~~~~~~~I~I~~G~Y~E~V~ip~~k~~itl~G~~~~~TvI~~~~~~~~ 83 (293)
T PLN02432 4 SIDLSTAILIRVDQSGKGDFRKIQDAIDAVPSNNSQLVFIWVKPGIYREKVVVPADKPFITLSGTQASNTIITWNDGGDI 83 (293)
T ss_pred cccccceEEEEECCCCCCCccCHHHHHhhccccCCceEEEEEeCceeEEEEEEeccCceEEEEEcCCCCeEEEecCCccc
Confidence 44567889999999999999999999999999888999999999999999999999999999999999999999998888
Q ss_pred cccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 113 LDSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 113 ~~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
..++||.+.+++|+++||||+|+++..+||+||++.+||+.|++|+|+|+|||||.+.|||||+||+|||+||||||+|+
T Consensus 84 ~~saT~~v~a~~f~a~nlt~~Nt~g~~~QAvAl~v~gDr~~f~~c~~~G~QDTLy~~~gr~yf~~c~I~G~VDFIFG~g~ 163 (293)
T PLN02432 84 FESPTLSVLASDFVGRFLTIQNTFGSSGKAVALRVAGDRAAFYGCRILSYQDTLLDDTGRHYYRNCYIEGATDFICGNAA 163 (293)
T ss_pred ccceEEEEECCCeEEEeeEEEeCCCCCCceEEEEEcCCcEEEEcceEecccceeEECCCCEEEEeCEEEecccEEecCce
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
++||
T Consensus 164 a~Fe 167 (293)
T PLN02432 164 SLFE 167 (293)
T ss_pred EEEE
Confidence 9997
No 3
>PLN02497 probable pectinesterase
Probab=100.00 E-value=9.9e-55 Score=379.50 Aligned_cols=158 Identities=43% Similarity=0.755 Sum_probs=151.6
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCCCccccceE
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGGSILDSATL 118 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~~t~~sat~ 118 (196)
...++|+++|+|+|+|||+|||++|+++++|++|+|+||+|+|+|.||++||+|+|+|++++.|+|+++++.++..++||
T Consensus 31 ~~~i~Va~dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~G~Y~EkV~Ip~~k~~itl~G~g~~~tiIt~~~~~~t~~SaT~ 110 (331)
T PLN02497 31 QQQVFVDQSGHGNFTTIQSAIDSVPSNNKHWFCINVKAGLYREKVKIPYDKPFIVLVGAGKRRTRIEWDDHDSTAQSPTF 110 (331)
T ss_pred ceEEEECCCCCCCccCHHHHHhhccccCCceEEEEEeCcEEEEEEEecCCCCcEEEEecCCCCceEEEeccccccCceEE
Confidence 36889999999999999999999999988999999999999999999999999999999999999999998888899999
Q ss_pred EeecCcEEEEEeEEEecCCC--------CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecC
Q 044741 119 TVLASHFVARSLTIQNTYGS--------YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGN 190 (196)
Q Consensus 119 ~v~a~~~~~~nlti~Ns~g~--------~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~ 190 (196)
.+.+++|+++||||+|+++. .+||+||++++||+.||||+|+|+|||||.+.|||||++|+|||+||||||+
T Consensus 111 ~v~a~~f~a~nlT~~Nt~~~~~~~~~~~~~QAVAl~v~gDr~~fy~C~f~G~QDTLy~~~gRqyf~~C~IeG~VDFIFG~ 190 (331)
T PLN02497 111 STLADNTVVKSITFANSYNFPSKGNKNPRVPAVAAMIGGDKSAFYSCGFAGVQDTLWDSDGRHYFKRCTIQGAVDFIFGS 190 (331)
T ss_pred EEecCCeEEEccEEEeCCCCccccCCCCCcceEEEEecCCcEEEEeeEEeccccceeeCCCcEEEEeCEEEecccEEccC
Confidence 99999999999999999862 2499999999999999999999999999999999999999999999999999
Q ss_pred cceeeC
Q 044741 191 ANSLFE 196 (196)
Q Consensus 191 g~a~f~ 196 (196)
|+|+||
T Consensus 191 g~a~Fe 196 (331)
T PLN02497 191 GQSIYE 196 (331)
T ss_pred ceEEEE
Confidence 999997
No 4
>PLN02634 probable pectinesterase
Probab=100.00 E-value=2e-54 Score=380.20 Aligned_cols=163 Identities=45% Similarity=0.785 Sum_probs=153.7
Q ss_pred CCCCCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC---
Q 044741 34 KDFSTAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG--- 110 (196)
Q Consensus 34 ~~~~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~--- 110 (196)
.+|+.+..++|+++|+|+|+|||+|||++|+++++|++|+|+||+|+|+|+||++||+|||+|++.+.|+|+|++.+
T Consensus 50 ~~~~~~~~i~Va~dGsGdf~TIQaAIda~P~~~~~r~vI~Ik~GvY~EkV~Ip~~k~~ItL~G~g~~~TiIt~~~~a~~~ 129 (359)
T PLN02634 50 VGPSGHKVITVDANGHGDFRSVQDAVDSVPKNNTMSVTIKINAGFYREKVVVPATKPYITFQGAGRDVTAIEWHDRASDR 129 (359)
T ss_pred cCCCCCccEEECCCCCCCccCHHHHHhhCcccCCccEEEEEeCceEEEEEEEcCCCCeEEEEecCCCceEEEeccccccc
Confidence 56888899999999999999999999999999899999999999999999999999999999999999999987532
Q ss_pred -------CccccceEEeecCcEEEEEeEEEecCCC------CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEec
Q 044741 111 -------SILDSATLTVLASHFVARSLTIQNTYGS------YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSK 177 (196)
Q Consensus 111 -------~t~~sat~~v~a~~~~~~nlti~Ns~g~------~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~ 177 (196)
+++.++||.|.+++|+++||||+|+++. .+||+||++.+||+.|++|+|+|+|||||.+.|||||+|
T Consensus 130 ~~~g~~~~T~~SaTv~V~a~~F~a~niTf~Nta~~~~~g~~~~QAVAl~v~gDra~f~~C~f~G~QDTL~~~~gR~yf~~ 209 (359)
T PLN02634 130 GANGQQLRTYQTASVTVYANYFTARNISFKNTAPAPMPGMQGWQAVAFRISGDKAFFFGCGFYGAQDTLCDDAGRHYFKE 209 (359)
T ss_pred CCCCcccccccceEEEEECCCeEEEeCeEEeCCccCCCCCCCCceEEEEecCCcEEEEEeEEecccceeeeCCCCEEEEe
Confidence 3678999999999999999999999842 359999999999999999999999999999999999999
Q ss_pred CEEEccceeEecCcceeeC
Q 044741 178 CYIEGATDFISGNANSLFE 196 (196)
Q Consensus 178 c~I~G~vDfIfG~g~a~f~ 196 (196)
|+|||+||||||+|+++||
T Consensus 210 CyIeG~VDFIFG~g~a~Fe 228 (359)
T PLN02634 210 CYIEGSIDFIFGNGRSMYK 228 (359)
T ss_pred eEEcccccEEcCCceEEEe
Confidence 9999999999999999997
No 5
>PLN02665 pectinesterase family protein
Probab=100.00 E-value=7.9e-54 Score=378.11 Aligned_cols=158 Identities=42% Similarity=0.773 Sum_probs=150.1
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC---Ccccc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG---SILDS 115 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~---~t~~s 115 (196)
..+++|+++|+|+|+|||+||+++|+++++|++|+|+||+|+|+|.||++||+|||+|++.+.|+|+|++.. +|..+
T Consensus 67 ~~~i~V~~dG~Gdf~TIq~AIdaiP~~~~~r~vI~Ik~GvY~EkV~Ip~~kp~Itl~G~~~~~tiIt~~~~a~~~gT~~S 146 (366)
T PLN02665 67 PRIIKVRKDGSGDFKTITDAIKSIPAGNTQRVIIDIGPGEYNEKITIDRSKPFVTLYGSPGAMPTLTFDGTAAKYGTVYS 146 (366)
T ss_pred ceEEEEcCCCCCCccCHHHHHhhCcccCCceEEEEEeCcEEEEEEEecCCCCEEEEEecCCCCCEEEECCccCCCCCcce
Confidence 378999999999999999999999999999999999999999999999999999999999999999998754 57889
Q ss_pred ceEEeecCcEEEEEeEEEecCCC------CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEec
Q 044741 116 ATLTVLASHFVARSLTIQNTYGS------YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISG 189 (196)
Q Consensus 116 at~~v~a~~~~~~nlti~Ns~g~------~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG 189 (196)
+||.|.+++|+++||||+|+++. .+||+||++.+||+.|+||+|+|+|||||++.|||||+||+|||+||||||
T Consensus 147 aTv~v~a~~F~a~nitf~Nta~~~~~~~~g~QAVAl~v~gDka~f~~C~f~G~QDTL~~~~gr~yf~~CyIeG~VDFIFG 226 (366)
T PLN02665 147 ATLIVESDYFMAANIIIKNSAPRPDGKRKGAQAVAMRISGDKAAFYNCRFIGFQDTLCDDKGRHFFKDCYIEGTVDFIFG 226 (366)
T ss_pred EEEEEECCCeEEEeeEEEeCCCCcCCCCCCcceEEEEEcCCcEEEEcceeccccceeEeCCCCEEEEeeEEeeccceecc
Confidence 99999999999999999999852 249999999999999999999999999999999999999999999999999
Q ss_pred CcceeeC
Q 044741 190 NANSLFE 196 (196)
Q Consensus 190 ~g~a~f~ 196 (196)
+|+++||
T Consensus 227 ~g~a~fe 233 (366)
T PLN02665 227 SGKSLYL 233 (366)
T ss_pred ccceeeE
Confidence 9999997
No 6
>PLN02773 pectinesterase
Probab=100.00 E-value=3.7e-53 Score=368.25 Aligned_cols=159 Identities=42% Similarity=0.752 Sum_probs=149.7
Q ss_pred CcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC-------
Q 044741 38 TAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG------- 110 (196)
Q Consensus 38 ~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~------- 110 (196)
....|+|+++|+|+|+|||+||+++|.++++|++|+|+||+|+|+|+||+.||+|||+|++++.|+|+|++.+
T Consensus 3 ~~~~i~Va~dGsGdf~TIq~Aida~P~~~~~~~~I~Ik~G~Y~E~V~I~~~k~~itl~G~~~~~TiI~~~~~a~~~~~~~ 82 (317)
T PLN02773 3 ARRVLRVAQDGSGDYCTVQDAIDAVPLCNRCRTVIRVAPGVYRQPVYVPKTKNLITLAGLSPEATVLTWNNTATKIDHHQ 82 (317)
T ss_pred cceEEEECCCCCCCccCHHHHHhhchhcCCceEEEEEeCceEEEEEEECcCCccEEEEeCCCCceEEEccCccccccccc
Confidence 3467899999999999999999999999889999999999999999999999999999999999999987532
Q ss_pred -------CccccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 111 -------SILDSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 111 -------~t~~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
+++.++||.|.+++|+++||||+|+++. .+||+||++.+||+.|++|+|+|+|||||++.|||||+||+|||
T Consensus 83 ~~~~~g~gT~~SaTv~v~a~~f~a~nlT~~Nt~~~~~gQAvAl~v~gDr~~f~~c~~~G~QDTL~~~~gr~yf~~c~IeG 162 (317)
T PLN02773 83 ASRVIGTGTFGCGTVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLRDCYIEG 162 (317)
T ss_pred cccccCcCccCceEEEEECCCeEEEeeEEEeCCCCCCCcEEEEEecCccEEEEccEeecccceeEeCCCCEEEEeeEEee
Confidence 4678899999999999999999999875 46999999999999999999999999999999999999999999
Q ss_pred cceeEecCcceeeC
Q 044741 183 ATDFISGNANSLFE 196 (196)
Q Consensus 183 ~vDfIfG~g~a~f~ 196 (196)
+||||||+|+++||
T Consensus 163 ~VDFIFG~g~a~Fe 176 (317)
T PLN02773 163 SVDFIFGNSTALLE 176 (317)
T ss_pred cccEEeeccEEEEE
Confidence 99999999999997
No 7
>PLN02304 probable pectinesterase
Probab=100.00 E-value=3.9e-53 Score=373.97 Aligned_cols=158 Identities=40% Similarity=0.708 Sum_probs=149.9
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC----Cccc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG----SILD 114 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~----~t~~ 114 (196)
...++|+++|+|+|+|||+|||++|+++++|++|+|+||+|+|+|.||++||+|+|+|++++.|+|+|++.. +|+.
T Consensus 74 ~~~i~Va~dGsGdf~TIQ~AIdavP~~~~~r~vI~Ik~GvY~EkV~Ip~~K~~Itl~G~g~~~TiIt~~~~a~~~~gT~~ 153 (379)
T PLN02304 74 TSILCVDPNGCCNFTTVQSAVDAVGNFSQKRNVIWINSGIYYEKVTVPKTKPNITFQGQGFDSTAIAWNDTAKSANGTFY 153 (379)
T ss_pred ceEEEECCCCCCCccCHHHHHhhCcccCCCcEEEEEeCeEeEEEEEECCCCCcEEEEecCCCCcEEEccCcccCCCCccc
Confidence 368899999999999999999999999889999999999999999999999999999999999999998764 4788
Q ss_pred cceEEeecCcEEEEEeEEEecCC-----C-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEe
Q 044741 115 SATLTVLASHFVARSLTIQNTYG-----S-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFIS 188 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g-----~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIf 188 (196)
++||.|.+++|+++||||+|+++ . .+||+||++.+||++|++|+|+|+|||||.+.|||||+||+|||+|||||
T Consensus 154 SaTv~v~a~~F~a~nITf~Nta~~~~~g~~~~QAVAL~v~gDra~fy~C~f~G~QDTLy~~~gR~Yf~~CyIeG~VDFIF 233 (379)
T PLN02304 154 SASVQVFASNFIAKNISFMNVAPIPKPGDVGAQAVAIRIAGDQAAFWGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIF 233 (379)
T ss_pred eEEEEEECCCeEEEeeEEEecCCCCCCCCCCccEEEEEecCCcEEEEeceEecccceeEeCCCCEEEEeeEEcccccEEe
Confidence 99999999999999999999983 2 35999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeC
Q 044741 189 GNANSLFE 196 (196)
Q Consensus 189 G~g~a~f~ 196 (196)
|+|+|+||
T Consensus 234 G~g~A~Fe 241 (379)
T PLN02304 234 GDARSLYE 241 (379)
T ss_pred ccceEEEE
Confidence 99999997
No 8
>PLN02682 pectinesterase family protein
Probab=100.00 E-value=9.5e-53 Score=371.02 Aligned_cols=158 Identities=49% Similarity=0.764 Sum_probs=147.6
Q ss_pred cEEEEEcC-CCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC-------
Q 044741 39 AVLIRVEK-YGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG------- 110 (196)
Q Consensus 39 a~~i~V~~-~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~------- 110 (196)
..+++|++ +|+|+|+|||+|||++|+++.+|++|+|+||+|+|+|.||+.||+|||+|++++.|+|+|++.+
T Consensus 68 ~~~i~V~~~~gsGdf~TIQ~AIdavP~~~~~r~vI~Ik~G~Y~EkV~Ip~~k~~Itl~G~g~~~TiIt~~~~a~~~~~~g 147 (369)
T PLN02682 68 SYTIVVDKKPAAGDFTTIQAAIDSLPVINLVRVVIKVNAGTYREKVNIPPLKAYITLEGAGADKTIIQWGDTADTPGPGG 147 (369)
T ss_pred CeEEEEeCCCCCCCccCHHHHHhhccccCCceEEEEEeCceeeEEEEEeccCceEEEEecCCCccEEEeccccCccCCCC
Confidence 45789998 5899999999999999998889999999999999999999999999999999999999987542
Q ss_pred ---CccccceEEeecCcEEEEEeEEEecCC-----C-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 111 ---SILDSATLTVLASHFVARSLTIQNTYG-----S-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 111 ---~t~~sat~~v~a~~~~~~nlti~Ns~g-----~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
+|+.++||.|.+++|+++||||+|+++ . .+||+||++.+||++||||+|+|+|||||++.|||||+||+||
T Consensus 148 ~~~gT~~SAT~~v~a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~~gRqyf~~C~Ie 227 (369)
T PLN02682 148 RPLGTYGSATFAVNSPYFIAKNITFKNTAPVPPPGALGKQAVALRISADTAAFYGCKFLGAQDTLYDHLGRHYFKDCYIE 227 (369)
T ss_pred CccccccceEEEEECCCeEEEeeEEEcccccCCCCCCcccEEEEEecCCcEEEEcceEeccccceEECCCCEEEEeeEEc
Confidence 467899999999999999999999984 2 3599999999999999999999999999999999999999999
Q ss_pred ccceeEecCcceeeC
Q 044741 182 GATDFISGNANSLFE 196 (196)
Q Consensus 182 G~vDfIfG~g~a~f~ 196 (196)
|+||||||+|+++||
T Consensus 228 G~VDFIFG~g~a~Fe 242 (369)
T PLN02682 228 GSVDFIFGNGLSLYE 242 (369)
T ss_pred ccccEEecCceEEEE
Confidence 999999999999997
No 9
>PLN02671 pectinesterase
Probab=100.00 E-value=5.5e-52 Score=365.04 Aligned_cols=161 Identities=46% Similarity=0.768 Sum_probs=148.9
Q ss_pred CCCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCC--CCeEEEcCCCC---
Q 044741 36 FSTAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKA--SRTKITWSDGG--- 110 (196)
Q Consensus 36 ~~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~--~~t~I~~~~~~--- 110 (196)
......++|+++|+|+|+|||+|||++|+++++|++|+|+||+|+|+|+||++||+|||+|++. ++|+|+|++..
T Consensus 55 ~~~~~~i~Va~dGsGdf~TIQ~AIdavP~~~~~~~~I~Ik~GvY~EkV~I~~~k~~Itl~G~g~~~~~TvIt~~~~a~~~ 134 (359)
T PLN02671 55 TNVSRVIVVDKNGGGDSLTVQGAVDMVPDYNSQRVKIYILPGIYREKVLVPKSKPYISFIGNESRAGDTVISWNDKASDL 134 (359)
T ss_pred cCCceeEEECCCCCCCccCHHHHHHhchhcCCccEEEEEeCceEEEEEEECCCCCeEEEEecCCCCCCEEEEcCCccccc
Confidence 3445688999999999999999999999998899999999999999999999999999999973 78999998643
Q ss_pred -------CccccceEEeecCcEEEEEeEEEecCCC-----CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecC
Q 044741 111 -------SILDSATLTVLASHFVARSLTIQNTYGS-----YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKC 178 (196)
Q Consensus 111 -------~t~~sat~~v~a~~~~~~nlti~Ns~g~-----~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c 178 (196)
+|..++||.|.+++|+++||||+|++.. .+||+||++.+||+.|+||+|+|+|||||.+.|||||++|
T Consensus 135 ~~~g~~~gT~~SaTv~v~a~~F~a~nitfeNt~~~~~g~~~~QAVALrv~gDra~f~~c~f~G~QDTLy~~~gR~yf~~C 214 (359)
T PLN02671 135 DSNGFELGTYRTASVTIESDYFCATGITFENTVVAEPGGQGMQAVALRISGDKAFFYKVRVLGAQDTLLDETGSHYFYQC 214 (359)
T ss_pred ccCCccccceeeEEEEEECCceEEEeeEEEcCCCCCCCCCCccEEEEEEcCccEEEEcceEeccccccEeCCCcEEEEec
Confidence 3678899999999999999999999632 3599999999999999999999999999999999999999
Q ss_pred EEEccceeEecCcceeeC
Q 044741 179 YIEGATDFISGNANSLFE 196 (196)
Q Consensus 179 ~I~G~vDfIfG~g~a~f~ 196 (196)
||||+||||||+|+|+||
T Consensus 215 yIeG~VDFIFG~g~A~Fe 232 (359)
T PLN02671 215 YIQGSVDFIFGNAKSLYQ 232 (359)
T ss_pred EEEEeccEEecceeEEEe
Confidence 999999999999999997
No 10
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3e-52 Score=378.57 Aligned_cols=157 Identities=33% Similarity=0.584 Sum_probs=150.2
Q ss_pred EEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC----Ccccc
Q 044741 40 VLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG----SILDS 115 (196)
Q Consensus 40 ~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~----~t~~s 115 (196)
..++|++||+|+|+|||+||+++|+++.+|++|+|+||+|+|+|.|+++||+|+|+|++++.|+|++++.. .|+.+
T Consensus 197 ~~vvVa~dGsG~f~TIq~AI~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~nItliGdg~~~TiIt~n~~~~~g~~T~~S 276 (509)
T PLN02488 197 ADVVVAKDGSGKYNTVNAAIAAAPEHSRKRFVIYIKTGVYDEIVRIGSTKPNLTLIGDGQDSTIITGNLSASNGKRTFYT 276 (509)
T ss_pred ccEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCeeEEEEEecCCCccEEEEecCCCceEEEEcccccCCCCceee
Confidence 57899999999999999999999999889999999999999999999999999999999999999988643 47899
Q ss_pred ceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCccee
Q 044741 116 ATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANSL 194 (196)
Q Consensus 116 at~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a~ 194 (196)
+||.|.+++|+++||||+|++|+ .+||+||++.+|+++||+|+|+|||||||++.+||||++|+|+|+||||||+|+++
T Consensus 277 ATv~v~g~gF~A~nitf~Ntag~~~~QAVALrv~~Dra~Fy~C~f~GyQDTLy~~~~RqyyrdC~I~GtVDFIFG~a~av 356 (509)
T PLN02488 277 ATVASNGDGFIGIDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRIEGYQDALYPHRDRQFYRECFITGTVDFICGNAAAV 356 (509)
T ss_pred EEEEEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeeccCcceeeCCCCEEEEeeEEeeccceEecceEEE
Confidence 99999999999999999999987 46999999999999999999999999999999999999999999999999999999
Q ss_pred eC
Q 044741 195 FE 196 (196)
Q Consensus 195 f~ 196 (196)
||
T Consensus 357 Fq 358 (509)
T PLN02488 357 FQ 358 (509)
T ss_pred EE
Confidence 97
No 11
>PLN02480 Probable pectinesterase
Probab=100.00 E-value=1.8e-51 Score=361.01 Aligned_cols=157 Identities=45% Similarity=0.771 Sum_probs=148.1
Q ss_pred EEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC-CccccceE
Q 044741 40 VLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG-SILDSATL 118 (196)
Q Consensus 40 ~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~-~t~~sat~ 118 (196)
.+++|+++|+|+|+|||+|||++|+++++|++|+|+||+|+|+|.|+++||+|||+|++.+.|+|++++.. .+..+++|
T Consensus 48 ~~~~Va~~G~g~f~TIQ~AIdaap~~~~~~~~I~Ik~GvY~E~V~I~~~kp~ItL~G~g~~~TvI~~~~~~~~~~~saTv 127 (343)
T PLN02480 48 RTIIVDINGKGDFTSVQSAIDAVPVGNSEWIIVHLRKGVYREKVHIPENKPFIFMRGNGKGRTSIVWSQSSSDNAASATF 127 (343)
T ss_pred cEEEECCCCCCCcccHHHHHhhCccCCCceEEEEEcCcEEEEEEEECCCCceEEEEecCCCCeEEEccccccCCCCceEE
Confidence 68899999999999999999999999889999999999999999999999999999999999999998754 34578999
Q ss_pred EeecCcEEEEEeEEEecCCC------CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 119 TVLASHFVARSLTIQNTYGS------YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 119 ~v~a~~~~~~nlti~Ns~g~------~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
+|.+++|+++||||+|+++. ..||+||++.+|++.|+||+|+|+|||||.+.|||||+||+|||+||||||+|+
T Consensus 128 tV~a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~gDra~f~~c~f~G~QDTLy~~~gR~yf~~C~IeG~VDFIFG~g~ 207 (343)
T PLN02480 128 TVEAPHFVAFGISIRNDAPTGMAFTSENQSVAAFVGADKVAFYHCAFYSTHNTLFDYKGRHYYHSCYIQGSIDFIFGRGR 207 (343)
T ss_pred EEECCCEEEEeeEEEecCCCCCCCCCCCceEEEEecCCcEEEEeeEEecccceeEeCCCCEEEEeCEEEeeeeEEcccee
Confidence 99999999999999999752 359999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
+|||
T Consensus 208 a~fe 211 (343)
T PLN02480 208 SIFH 211 (343)
T ss_pred EEEE
Confidence 9997
No 12
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=4.8e-52 Score=380.56 Aligned_cols=159 Identities=34% Similarity=0.554 Sum_probs=151.3
Q ss_pred CcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCcc
Q 044741 38 TAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSIL 113 (196)
Q Consensus 38 ~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~ 113 (196)
...+++|++||+|+|+|||+||+++|+++.+|++|+|+||+|+|+|.||+.||+|+|+|++++.|+|++++. .+|+
T Consensus 216 ~~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~itl~G~g~~~TiIt~~~~~~dg~~T~ 295 (530)
T PLN02933 216 TNVNLSVAIDGTGNFTTINEAVSAAPNSSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTF 295 (530)
T ss_pred CcceEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEcCceEEEEEEecCCCceEEEEEcCCCCcEEEeCCccCCCCccc
Confidence 346899999999999999999999999988999999999999999999999999999999999999999864 3578
Q ss_pred ccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
.++||.|.+++|+++||||+|++|+ .+||+||++.+|++.||+|+|+|||||||++.|||||++|||+|+||||||+|+
T Consensus 296 ~SaT~~v~a~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~~Rqyy~~C~IeGtVDFIFG~a~ 375 (530)
T PLN02933 296 QTATVGVKGKGFIAKDISFVNYAGPAKHQAVALRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAA 375 (530)
T ss_pred cceEEEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEEeEEEecccccccCCCceEEEeeEEecccceeccCce
Confidence 9999999999999999999999987 459999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
||||
T Consensus 376 avFq 379 (530)
T PLN02933 376 VVFQ 379 (530)
T ss_pred EEEe
Confidence 9997
No 13
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.6e-52 Score=380.10 Aligned_cols=159 Identities=35% Similarity=0.536 Sum_probs=151.0
Q ss_pred CcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC----Ccc
Q 044741 38 TAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG----SIL 113 (196)
Q Consensus 38 ~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~----~t~ 113 (196)
....++|++||+|+|+|||+||+++|+++++|++|+|+||+|+|+|.||++||+|+|+|++++.|+|++++.. +|+
T Consensus 204 ~~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T~ 283 (520)
T PLN02201 204 VTPDVVVAADGTGNFTTIMDAVLAAPDYSTKRYVIYIKKGVYLENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTF 283 (520)
T ss_pred CCceEEEcCCCCCCccCHHHHHHhchhcCCCcEEEEEeCceeEEEEEecCCCceEEEEecCCCCcEEEeCCccCCCCccc
Confidence 3457899999999999999999999999889999999999999999999999999999999999999998653 478
Q ss_pred ccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
+++||.|.+++|+++||||+|++|+ .+||+||++.+|+++||+|+|+|||||||++.+||||++|+|+|+||||||+|+
T Consensus 284 ~SAT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~ 363 (520)
T PLN02201 284 RSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGYQDTLYTHTMRQFYRECRITGTVDFIFGDAT 363 (520)
T ss_pred ceEEEEEECCCeEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeeeeccCCeeEeCCCCEEEEeeEEeecccEEecCce
Confidence 9999999999999999999999986 469999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
+|||
T Consensus 364 avf~ 367 (520)
T PLN02201 364 AVFQ 367 (520)
T ss_pred EEEE
Confidence 9997
No 14
>PLN02916 pectinesterase family protein
Probab=100.00 E-value=1.3e-51 Score=375.32 Aligned_cols=159 Identities=34% Similarity=0.524 Sum_probs=149.5
Q ss_pred CcEEEEEcCCCCCCcchHHHHHHhCCC---CCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC----
Q 044741 38 TAVLIRVEKYGRGDFRTIQEAIDSVPD---NNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG---- 110 (196)
Q Consensus 38 ~a~~i~V~~~g~g~f~TIq~Ai~aap~---~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~---- 110 (196)
...+++|++||+|+|+|||+||+++|+ ++++|++|+|+||+|+|+|.||+.||+|+|+|+++++|+|++++..
T Consensus 185 ~~~~~vVa~dGsG~f~TIq~AI~a~P~~~~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~ 264 (502)
T PLN02916 185 SRADFVVARDGSGTHRTINQALAALSRMGKSRTNRVIIYVKAGVYNEKVEIDRHMKNVMFVGDGMDKTIITNNRNVPDGS 264 (502)
T ss_pred CcccEEECCCCCCCccCHHHHHHhcccccCCCCceEEEEEeCceeeEEEEecCCCceEEEEecCCCCcEEEeCCccCCCC
Confidence 455789999999999999999999995 4577999999999999999999999999999999999999998643
Q ss_pred CccccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEec
Q 044741 111 SILDSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISG 189 (196)
Q Consensus 111 ~t~~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG 189 (196)
.|+.++||.|.+++|+++||||+|++|+ .+||+||++++|+++||+|+|+|||||||++.+||||++|+|+|+||||||
T Consensus 265 ~T~~SAT~~v~~~~F~A~nitf~Ntag~~~~QAVALrv~~D~a~fy~C~f~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG 344 (502)
T PLN02916 265 TTYSSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSVFYRCSFKGYQDTLFVHSLRQFYRDCHIYGTIDFIFG 344 (502)
T ss_pred cceeeEEEEEECCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEeccCceeEeCCCCEEEEecEEecccceecc
Confidence 4789999999999999999999999987 459999999999999999999999999999999999999999999999999
Q ss_pred CcceeeC
Q 044741 190 NANSLFE 196 (196)
Q Consensus 190 ~g~a~f~ 196 (196)
+|+++||
T Consensus 345 ~a~avFq 351 (502)
T PLN02916 345 DAAVVFQ 351 (502)
T ss_pred CceEEEe
Confidence 9999997
No 15
>PLN02197 pectinesterase
Probab=100.00 E-value=2.3e-51 Score=380.52 Aligned_cols=158 Identities=33% Similarity=0.556 Sum_probs=150.4
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC------Cc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG------SI 112 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~------~t 112 (196)
...++|++||+|+|+|||+||+++|+++++|++|+|+||+|+|+|.|++.|++|+|+|++++.|+|++++.. .|
T Consensus 274 ~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~ni~l~G~g~~~TiIt~~~~~~~~~g~~T 353 (588)
T PLN02197 274 KATHVVAKDGSGQFKTISQAVMACPDKNPGRCIIHIKAGIYNEQVTIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTT 353 (588)
T ss_pred cccEEEcCCCCCCcCCHHHHHHhccccCCceEEEEEeCceEEEEEEccCCCceEEEEEcCCCCeEEEeccccccCCCCcc
Confidence 357899999999999999999999999889999999999999999999999999999999999999998653 37
Q ss_pred cccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCc
Q 044741 113 LDSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNA 191 (196)
Q Consensus 113 ~~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g 191 (196)
+.++||.|.+++|+++||||+|++|+ .+||+||++++|++.||+|+|+|||||||++.|||||++|+|+|+||||||+|
T Consensus 354 ~~SaT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~GyQDTLy~~~~Rqyy~~C~I~GtVDFIFG~a 433 (588)
T PLN02197 354 SLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKS 433 (588)
T ss_pred cceeEEEEECCcEEEEEeEEEeCCCCCCCceEEEEecCCcEEEEEeEEEecCcceEecCCCEEEEeeEEEecccccccce
Confidence 78999999999999999999999987 45999999999999999999999999999999999999999999999999999
Q ss_pred ceeeC
Q 044741 192 NSLFE 196 (196)
Q Consensus 192 ~a~f~ 196 (196)
++|||
T Consensus 434 ~avfq 438 (588)
T PLN02197 434 ATVIQ 438 (588)
T ss_pred eeeee
Confidence 99997
No 16
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.1e-51 Score=379.16 Aligned_cols=157 Identities=36% Similarity=0.640 Sum_probs=148.6
Q ss_pred EEEEEcCCCCCCcchHHHHHHhCCCC---CCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCc
Q 044741 40 VLIRVEKYGRGDFRTIQEAIDSVPDN---NSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSI 112 (196)
Q Consensus 40 ~~i~V~~~g~g~f~TIq~Ai~aap~~---~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t 112 (196)
.+++|++||+|+|+|||+||+++|++ +.+|++|+|+||+|+|+|.||+.|++|+|+|++++.|+|++++. .+|
T Consensus 250 ~~~~Va~dGsG~f~TIq~Av~a~p~~~~~~~~~~vI~Ik~G~Y~E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T 329 (566)
T PLN02713 250 DIVTVNQNGTGNFTTINDAVAAAPNNTDGSNGYFVIYVTAGVYEEYVSIPKNKKYLMMIGDGINQTVITGNRSVVDGWTT 329 (566)
T ss_pred ceEEECCCCCCCCCCHHHHHHhhhcccCCCCceEEEEEcCcEEEEEEEecCCCceEEEEecCCCCcEEEcCCcccCCCcc
Confidence 36899999999999999999999986 46799999999999999999999999999999999999999864 357
Q ss_pred cccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCc
Q 044741 113 LDSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNA 191 (196)
Q Consensus 113 ~~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g 191 (196)
++++||.|.+++|+++||||+|++|+ .+|||||++.+|+++||+|+|+|||||||++.+||||++|+|+|+||||||+|
T Consensus 330 ~~SaT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a 409 (566)
T PLN02713 330 FNSATFAVVGQNFVAVNITFRNTAGPAKHQAVALRSGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNA 409 (566)
T ss_pred ccceeEEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeeccCCcceEECCCCEEEEeeEEecccceecccc
Confidence 88999999999999999999999987 45999999999999999999999999999999999999999999999999999
Q ss_pred ceeeC
Q 044741 192 NSLFE 196 (196)
Q Consensus 192 ~a~f~ 196 (196)
+++||
T Consensus 410 ~avfq 414 (566)
T PLN02713 410 AVVFQ 414 (566)
T ss_pred eEEEe
Confidence 99997
No 17
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2.4e-51 Score=378.10 Aligned_cols=157 Identities=40% Similarity=0.594 Sum_probs=148.7
Q ss_pred EEEEEcCCCCCCcchHHHHHHhCCCC--CCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC----Ccc
Q 044741 40 VLIRVEKYGRGDFRTIQEAIDSVPDN--NSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG----SIL 113 (196)
Q Consensus 40 ~~i~V~~~g~g~f~TIq~Ai~aap~~--~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~----~t~ 113 (196)
..++|++||+|+|+|||+||+++|+. +++|++|+|+||+|+|+|.||++||+|+|+|++++.|+|++++.. +|+
T Consensus 223 ~~~~Va~dGsG~f~TIq~Ai~a~p~~~~~~~r~vI~Ik~G~Y~E~V~i~~~k~~i~l~G~g~~~TvIt~~~~~~~~~~T~ 302 (539)
T PLN02995 223 ANLVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENINVRLNNDDIMLVGDGMRSTIITGGRSVKGGYTTY 302 (539)
T ss_pred CcEEECCCCCCCccCHHHHHHhcccccCCCceEEEEEeCCEeEEEEEecCCCCcEEEEEcCCCCeEEEeCCccCCCCccc
Confidence 47899999999999999999999953 677999999999999999999999999999999999999998643 488
Q ss_pred ccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
.++||.|.+++|+++||||+|++|+ .+||+||++.+||++||+|+|+|||||||++.+||||++|+|+|+||||||+|+
T Consensus 303 ~SaT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~Dr~~f~~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~ 382 (539)
T PLN02995 303 NSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAA 382 (539)
T ss_pred ceEEEEEECCCeEEEeeEEEeCCCCCCCceEEEEEcCCceeEEcceEecccchhccCCCceEEEeeEEeeccceEecccc
Confidence 9999999999999999999999987 469999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
+|||
T Consensus 383 avf~ 386 (539)
T PLN02995 383 AVFQ 386 (539)
T ss_pred eEEe
Confidence 9997
No 18
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.4e-51 Score=379.22 Aligned_cols=158 Identities=35% Similarity=0.583 Sum_probs=150.3
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC-----CCcc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG-----GSIL 113 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~-----~~t~ 113 (196)
...++|++||+|+|+|||+||+++|+++++|++|+|+||+|+|+|.||++||+|+|+|+++++|+|+++.+ .+|+
T Consensus 258 ~~~~~Va~dGsG~f~TIq~Av~a~p~~~~~r~vI~Ik~GvY~E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~~T~ 337 (572)
T PLN02990 258 KANVVVAQDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYNEKVDVTKKMTHVTFIGDGPTKTKITGSLNFYIGKVKTY 337 (572)
T ss_pred CceEEECCCCCCCCcCHHHHHhhCcccCCceEEEEEeCceeEEEEEecCCCCcEEEEecCCCceEEEeccccCCCCccce
Confidence 35789999999999999999999999988999999999999999999999999999999999999998743 3578
Q ss_pred ccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
.++||.|.+++|+++||||+|++|. .+||+||++.+|+++||+|+|+|||||||++.+||||++|+|+|+||||||+|+
T Consensus 338 ~saT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~ 417 (572)
T PLN02990 338 LTATVAINGDHFTAKNIGFENTAGPEGHQAVALRVSADYAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDAK 417 (572)
T ss_pred eeeEEEEEcCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEecccchhccCCCcEEEEeeEEecccceEccCce
Confidence 9999999999999999999999987 469999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
++||
T Consensus 418 avf~ 421 (572)
T PLN02990 418 VVLQ 421 (572)
T ss_pred EEEE
Confidence 9997
No 19
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.8e-51 Score=373.87 Aligned_cols=158 Identities=30% Similarity=0.509 Sum_probs=148.5
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCC-CCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCcc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVP-DNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSIL 113 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap-~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~ 113 (196)
...++|++||+|+|+|||+||+++| +++++|++|+|+||+|+|+|.||+.||+|+|+|+++++|+|++++. .+|+
T Consensus 224 ~~~~vVa~dGsG~f~TIq~AI~a~~~~~~~~r~vI~Ik~GvY~E~V~I~~~k~nItl~G~g~~~TiIt~~~~~~~g~~T~ 303 (529)
T PLN02170 224 KVHAVVAADGSGTHKTIGEALLSTSLESGGGRTVIYLKAGTYHENLNIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTY 303 (529)
T ss_pred cccEEEcCCCCCchhhHHHHHHhcccccCCceEEEEEeCCeeEEEEecCCCCceEEEEEcCCCCeEEEeCCcCCCCCccc
Confidence 4578999999999999999999765 5677899999999999999999999999999999999999999864 3578
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCC-CceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSY-GKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~-~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
.++||.|.+++|+++||||+|++|+. +||+||++.+|+++||+|+|+|||||||++.|||||++|+|+|+||||||+|+
T Consensus 304 ~SaTv~v~~~~F~a~nitf~Ntag~~~~QAVALrv~gDr~~fy~C~f~GyQDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~ 383 (529)
T PLN02170 304 QTATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDKSVVYRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSA 383 (529)
T ss_pred cceEEEEEcCCeEEEeeEEEecCCCCCCceEEEEecCCcEEEEeeeEeccCCcceeCCCCEEEEeeEEccccceecccce
Confidence 89999999999999999999999874 69999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
++||
T Consensus 384 avFq 387 (529)
T PLN02170 384 VVFQ 387 (529)
T ss_pred EEEe
Confidence 9997
No 20
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.5e-51 Score=382.72 Aligned_cols=158 Identities=31% Similarity=0.592 Sum_probs=150.8
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCccc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSILD 114 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~~ 114 (196)
..+++|++||.|+|+|||+||+++|+++.+|++|+|+||+|+|+|.|++.|++|+|+|++++.|+|+|+.. .+|++
T Consensus 249 ~~~~vVa~dGsG~f~TIq~Av~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~Gdg~~~TiIt~~~~~~dg~~T~~ 328 (670)
T PLN02217 249 KPDIVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKAGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYK 328 (670)
T ss_pred CccEEECCCCCCCccCHHHHHHhccccCCceEEEEEeCCceEEEEEEcCCCCcEEEEecCCCCeEEEcCCccCCCCCccc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999854 35889
Q ss_pred cceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcce
Q 044741 115 SATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANS 193 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a 193 (196)
++||.|.+++|+++||||+|++|. .+||+||++.+|+++||||+|+|||||||++.+||||++|+|+|+||||||+|++
T Consensus 329 SAT~~v~g~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~a 408 (670)
T PLN02217 329 TATVAIVGDHFIAKNIGFENTAGAIKHQAVAIRVLSDESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAA 408 (670)
T ss_pred eEEEEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeeccchhccCCCcEEEEeCEEEEeccEEecCceE
Confidence 999999999999999999999987 4599999999999999999999999999999999999999999999999999999
Q ss_pred eeC
Q 044741 194 LFE 196 (196)
Q Consensus 194 ~f~ 196 (196)
|||
T Consensus 409 vfq 411 (670)
T PLN02217 409 VFQ 411 (670)
T ss_pred EEE
Confidence 997
No 21
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=4.3e-51 Score=376.44 Aligned_cols=158 Identities=37% Similarity=0.562 Sum_probs=150.2
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCccc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSILD 114 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~~ 114 (196)
..+++|++||+|+|+|||+||+++|+++++|++|+|+||+|+|+|.|++.|++|+|+|++++.|+|+++.. ..|++
T Consensus 235 ~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~dg~~T~~ 314 (548)
T PLN02301 235 KANVVVAKDGSGKYKTVKEAVASAPDNSKTRYVIYVKKGTYKENVEIGKKKKNLMLVGDGMDSTIITGSLNVIDGSTTFR 314 (548)
T ss_pred CccEEECCCCCCCcccHHHHHHhhhhcCCceEEEEEeCceeeEEEEecCCCceEEEEecCCCCcEEEeCCccCCCCCcee
Confidence 35789999999999999999999999988999999999999999999999999999999999999998753 35789
Q ss_pred cceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcce
Q 044741 115 SATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANS 193 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a 193 (196)
++||.+.+++|+++||+|+|++|+ .+||+||++++|+++||||+|+|||||||++.+||||+||+|+|+||||||+|++
T Consensus 315 SaT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~a 394 (548)
T PLN02301 315 SATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVSADQAVINRCRIDAYQDTLYAHSLRQFYRDSYITGTVDFIFGNAAV 394 (548)
T ss_pred eEEEEEECCceEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeeeeccccceecCCcEEEEeeEEEeccceeccccee
Confidence 999999999999999999999987 4599999999999999999999999999999999999999999999999999999
Q ss_pred eeC
Q 044741 194 LFE 196 (196)
Q Consensus 194 ~f~ 196 (196)
+||
T Consensus 395 vfq 397 (548)
T PLN02301 395 VFQ 397 (548)
T ss_pred EEe
Confidence 997
No 22
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.7e-51 Score=376.81 Aligned_cols=158 Identities=36% Similarity=0.548 Sum_probs=149.4
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCC-CCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC-----Cc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDN-NSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG-----SI 112 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~-~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~-----~t 112 (196)
...++|++||+|+|+|||+||+++|+. ..+|++|+|+||+|+|+|.|++.|++|+|+|+++++|+|+++... +|
T Consensus 240 ~~~~~Va~dGsg~f~TIq~Av~a~p~~~~~~r~vI~vk~GvY~E~V~i~~~k~~v~l~G~g~~~TiIt~~~~~~~~g~~T 319 (553)
T PLN02708 240 TPDVTVCKDGNCCYKTVQEAVNAAPDNNGDRKFVIRIKEGVYEETVRVPLEKKNVVFLGDGMGKTVITGSLNVGQPGIST 319 (553)
T ss_pred CccEEECCCCCCCccCHHHHHHhhhhccCCccEEEEEeCceEEeeeeecCCCccEEEEecCCCceEEEecCccCCCCcCc
Confidence 357899999999999999999999994 578999999999999999999999999999999999999997653 47
Q ss_pred cccceEEeecCcEEEEEeEEEecCCCC-CceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCc
Q 044741 113 LDSATLTVLASHFVARSLTIQNTYGSY-GKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNA 191 (196)
Q Consensus 113 ~~sat~~v~a~~~~~~nlti~Ns~g~~-~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g 191 (196)
+.++||.|.+++|+++||||+|++|+. +|||||++.+|+++||||+|+|||||||++.+||||++|+|+|+||||||+|
T Consensus 320 ~~saT~~v~~~~f~a~~it~~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~~rq~y~~C~I~GtVDFIFG~a 399 (553)
T PLN02708 320 YNTATVGVLGDGFMARDLTIQNTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIQGNVDFIFGNS 399 (553)
T ss_pred cceEEEEEEcCCeEEEeeEEEcCCCCCCCceEEEEecCCcEEEEeeeeeeccccceeCCCceEEEeeEEeecCCEEecCc
Confidence 889999999999999999999999874 5999999999999999999999999999999999999999999999999999
Q ss_pred ceeeC
Q 044741 192 NSLFE 196 (196)
Q Consensus 192 ~a~f~ 196 (196)
++|||
T Consensus 400 ~avfq 404 (553)
T PLN02708 400 AAVFQ 404 (553)
T ss_pred eEEEE
Confidence 99997
No 23
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.1e-51 Score=376.08 Aligned_cols=157 Identities=39% Similarity=0.596 Sum_probs=149.5
Q ss_pred EEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCcccc
Q 044741 40 VLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSILDS 115 (196)
Q Consensus 40 ~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~~s 115 (196)
..++|++||+|+|+|||+||+++|+++.+|++|+|+||+|+|+|.|++.||+|+|+|++++.|+|++++. .+|+++
T Consensus 230 ~~ivVa~dGsG~f~TIq~Ai~a~p~~~~~r~vI~Ik~GvY~E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T~~s 309 (541)
T PLN02416 230 EVLVVAADGTGNFSTITDAINFAPNNSNDRIIIYVREGVYEENVEIPIYKTNIVLIGDGSDVTFITGNRSVVDGWTTFRS 309 (541)
T ss_pred ceEEECCCCCCCccCHHHHHHhhhhcCCceEEEEEeCceeEEEEecCCCCccEEEEecCCCceEEeCCCccCCCCCccce
Confidence 4588999999999999999999999988999999999999999999999999999999999999999854 347889
Q ss_pred ceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCccee
Q 044741 116 ATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANSL 194 (196)
Q Consensus 116 at~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a~ 194 (196)
+||.|.+++|+++||||+|++|. .+||+||++.+|+++||+|+|+|||||||++.+||||+||+|+|+||||||+|+++
T Consensus 310 aT~~v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~av 389 (541)
T PLN02416 310 ATLAVSGEGFLARDITIENTAGPEKHQAVALRVNADLVALYRCTINGYQDTLYVHSFRQFYRECDIYGTIDYIFGNAAVV 389 (541)
T ss_pred EEEEEECCCeEEEeeEEEECCCCCCCceEEEEEcCccEEEEcceEecccchhccCCCceEEEeeEEeeccceeeccceEE
Confidence 99999999999999999999987 45999999999999999999999999999999999999999999999999999999
Q ss_pred eC
Q 044741 195 FE 196 (196)
Q Consensus 195 f~ 196 (196)
||
T Consensus 390 fq 391 (541)
T PLN02416 390 FQ 391 (541)
T ss_pred Ee
Confidence 97
No 24
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=7.2e-51 Score=377.99 Aligned_cols=159 Identities=35% Similarity=0.551 Sum_probs=150.8
Q ss_pred CcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEee-eEEEcCCCCcEEEecCCCCCeEEEcCCC----CCc
Q 044741 38 TAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYRE-KIIVPANKPFITISGTKASRTKITWSDG----GSI 112 (196)
Q Consensus 38 ~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E-~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t 112 (196)
....++|++||+|+|+|||+||+++|+++++|++|+|+||+|+| +|.|++.||+|+|+|++++.|+|++++. .+|
T Consensus 270 ~~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~~v~i~~~k~ni~l~G~g~~~TiIt~~~~~~~~~~t 349 (587)
T PLN02484 270 IQADIIVSKDGNGTFKTISEAIKKAPEHSSRRTIIYVKAGRYEENNLKVGRKKTNLMFIGDGKGKTVITGGKSIFDNLTT 349 (587)
T ss_pred CCceEEECCCCCCCcccHHHHHHhccccCCCcEEEEEeCCEEEEEEEEECCCCceEEEEecCCCCeEEecCCcccCCCcc
Confidence 34578999999999999999999999999999999999999999 5999999999999999999999999764 358
Q ss_pred cccceEEeecCcEEEEEeEEEecCCCC-CceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCc
Q 044741 113 LDSATLTVLASHFVARSLTIQNTYGSY-GKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNA 191 (196)
Q Consensus 113 ~~sat~~v~a~~~~~~nlti~Ns~g~~-~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g 191 (196)
+.++||.|.+++|+++||||+|++|+. +||+||++.+|+++||||+|+|||||||++.+||||++|+|+|+||||||+|
T Consensus 350 ~~saT~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a 429 (587)
T PLN02484 350 FHTASFAATGAGFIARDMTFENWAGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNA 429 (587)
T ss_pred cceEEEEEEcCCEEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeEeccCcccccCCCcEEEEecEEEeccceecccc
Confidence 899999999999999999999999874 5999999999999999999999999999999999999999999999999999
Q ss_pred ceeeC
Q 044741 192 NSLFE 196 (196)
Q Consensus 192 ~a~f~ 196 (196)
+++||
T Consensus 430 ~avfq 434 (587)
T PLN02484 430 AVVLQ 434 (587)
T ss_pred eeEEe
Confidence 99997
No 25
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=9.3e-51 Score=373.80 Aligned_cols=159 Identities=35% Similarity=0.565 Sum_probs=151.2
Q ss_pred CcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCcc
Q 044741 38 TAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSIL 113 (196)
Q Consensus 38 ~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~ 113 (196)
.+..++|++||+|+|+|||+||+++|+++.+|++|+|+||+|+|+|.|++.|++|+|+|++.++|+|+++.. .+|+
T Consensus 230 ~~~~~~Va~dGsG~f~TIq~Av~a~p~~~~~r~vI~Vk~GvY~E~V~I~~~k~~i~l~G~g~~~tiIt~~~~~~~g~~T~ 309 (537)
T PLN02506 230 MHVDTIVALDGSGHYRTITEAINEAPNHSNRRYIIYVKKGVYKENIDMKKKKTNIMLVGDGIGQTVVTGNRNFMQGWTTF 309 (537)
T ss_pred CCceEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCeeeEEEeccCCCceEEEEEcCCCCeEEEeCccccCCCCcc
Confidence 355899999999999999999999999988999999999999999999999999999999999999999864 3478
Q ss_pred ccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
.++||.|.+++|+++||+|+|++|+ .+||+||++.+|++.||||+|+|||||||++.+||||++|+|+|+||||||+|+
T Consensus 310 ~saT~~v~~~~F~a~nit~~Ntag~~~~QAVAl~v~~D~~~fy~C~~~G~QDTLy~~~~rqyy~~C~I~GtVDFIFG~a~ 389 (537)
T PLN02506 310 RTATVAVSGRGFIARDITFRNTAGPQNHQAVALRVDSDQSAFYRCSMEGYQDTLYAHSLRQFYRECEIYGTIDFIFGNGA 389 (537)
T ss_pred cceEEEEEcCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeecccccceecCCceEEEeeEEecccceEccCce
Confidence 8999999999999999999999987 469999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
+|||
T Consensus 390 avfq 393 (537)
T PLN02506 390 AVLQ 393 (537)
T ss_pred eEEe
Confidence 9997
No 26
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-50 Score=377.16 Aligned_cols=158 Identities=34% Similarity=0.563 Sum_probs=150.3
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCccc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSILD 114 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~~ 114 (196)
...++|++||+|+|+|||+||+++|+++.+|++|+|+||+|+|+|.|++.|++|+|+|++++.|+|++++. .+|+.
T Consensus 284 ~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T~~ 363 (596)
T PLN02745 284 KPNATVAKDGSGNFTTISDALAAMPAKYEGRYVIYVKQGIYDETVTVDKKMVNVTMYGDGSQKTIVTGNKNFADGVRTFR 363 (596)
T ss_pred cceEEECCCCCCCcccHHHHHHhccccCCceEEEEEeCCeeEEEEEEcCCCceEEEEecCCCceEEEECCcccCCCccee
Confidence 35789999999999999999999999988999999999999999999999999999999999999998753 35889
Q ss_pred cceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcce
Q 044741 115 SATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANS 193 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a 193 (196)
++||.|.+++|+++||||+|++|+ .+||+||++.+|++.||||+|+|||||||++.|||||++|+|+|+||||||+|++
T Consensus 364 saT~~v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~Dr~~f~~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~a 443 (596)
T PLN02745 364 TATFVALGEGFMAKSMGFRNTAGPEKHQAVAIRVQSDRSIFLNCRFEGYQDTLYAQTHRQFYRSCVITGTIDFIFGDAAA 443 (596)
T ss_pred eEEEEEEcCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeecccccccCCCcEEEEeeEEEeeccEEecceeE
Confidence 999999999999999999999987 4599999999999999999999999999999999999999999999999999999
Q ss_pred eeC
Q 044741 194 LFE 196 (196)
Q Consensus 194 ~f~ 196 (196)
|||
T Consensus 444 vf~ 446 (596)
T PLN02745 444 IFQ 446 (596)
T ss_pred EEE
Confidence 996
No 27
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=100.00 E-value=1.4e-50 Score=373.13 Aligned_cols=157 Identities=37% Similarity=0.584 Sum_probs=148.6
Q ss_pred EEEEEcCCCCCCcchHHHHHHhCCCCC---CceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCc
Q 044741 40 VLIRVEKYGRGDFRTIQEAIDSVPDNN---SELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSI 112 (196)
Q Consensus 40 ~~i~V~~~g~g~f~TIq~Ai~aap~~~---~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t 112 (196)
..++|++||+|+|+|||+||+++|... .+|++|+|++|+|+|+|.|+++|++|+|+|+++++|+|+++.. ..|
T Consensus 223 ~~~vVa~dGsG~f~TI~~Av~a~p~~~~~~~~r~vI~vk~G~Y~E~V~i~~~k~~i~l~G~g~~~tiIt~~~~~~dg~~T 302 (538)
T PLN03043 223 DAVIVGPYGTDNFTTITDAIAAAPNNSKPEDGYFVIYAREGYYEEYVVVPKNKKNIMLIGDGINKTIITGNHSVVDGWTT 302 (538)
T ss_pred ccEEECCCCCCCCcCHHHHHHhccccCCCCcceEEEEEcCeeeEEEEEeCCCCCcEEEEecCCCCeEEEeCCccCCCCcc
Confidence 588999999999999999999999875 3589999999999999999999999999999999999999854 358
Q ss_pred cccceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCc
Q 044741 113 LDSATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNA 191 (196)
Q Consensus 113 ~~sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g 191 (196)
+.++||.|.+++|+++||||+|++|+ .+||+||++.+|+++||+|+|+|||||||++.+||||++|+|+|+||||||+|
T Consensus 303 ~~saT~~v~~~~F~a~~it~~Ntag~~~~QAvAlrv~~D~~~f~~C~~~gyQDTLy~~~~rq~y~~c~I~GtVDFIFG~a 382 (538)
T PLN03043 303 FNSSTFAVSGERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNA 382 (538)
T ss_pred ccceEEEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeccCcccccCCCcEEEEeeEEeeccceEeecc
Confidence 88999999999999999999999987 45999999999999999999999999999999999999999999999999999
Q ss_pred ceeeC
Q 044741 192 NSLFE 196 (196)
Q Consensus 192 ~a~f~ 196 (196)
+++||
T Consensus 383 ~avfq 387 (538)
T PLN03043 383 AAIFQ 387 (538)
T ss_pred eeeee
Confidence 99997
No 28
>PLN02314 pectinesterase
Probab=100.00 E-value=2.2e-50 Score=375.17 Aligned_cols=159 Identities=32% Similarity=0.529 Sum_probs=150.5
Q ss_pred CcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCcc
Q 044741 38 TAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSIL 113 (196)
Q Consensus 38 ~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~ 113 (196)
....++|++||+|+|+|||+||+++|+++++|++|+|+||+|+|+|.|++.|++|+|+|+++++|+|+++.. ..++
T Consensus 276 ~~~~~~Va~dGsg~f~TI~~Av~a~p~~~~~r~vI~ik~G~Y~E~V~i~~~k~~i~l~G~g~~~tiIt~~~~~~~g~~t~ 355 (586)
T PLN02314 276 PTPNVTVAKDGSGDVKTINEAVASIPKKSKSRFVIYVKEGTYVENVLLDKSKWNVMIYGDGKDKTIISGSLNFVDGTPTF 355 (586)
T ss_pred CCccEEECCCCCCCccCHHHHHhhccccCCceEEEEEcCceEEEEEEecCCCceEEEEecCCCCcEEEecCCcCCCCCcc
Confidence 345689999999999999999999999999999999999999999999999999999999999999998653 3478
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCC-CceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSY-GKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNAN 192 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~-~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~ 192 (196)
.++||.+.+++|+++||||+|++|+. +||+||++.+|++.||||+|.|||||||++.+||||++|+|+|+||||||+|+
T Consensus 356 ~saT~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~f~~c~~~G~QDTLy~~~~rq~y~~C~I~GtvDFIFG~a~ 435 (586)
T PLN02314 356 STATFAAAGKGFIAKDMGFINTAGAAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYAHSNRQFYRDCDITGTIDFIFGNAA 435 (586)
T ss_pred ceEEEEEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeEEEeccchheeCCCCEEEEeeEEEeccceeccCce
Confidence 99999999999999999999999874 59999999999999999999999999999999999999999999999999999
Q ss_pred eeeC
Q 044741 193 SLFE 196 (196)
Q Consensus 193 a~f~ 196 (196)
++||
T Consensus 436 avf~ 439 (586)
T PLN02314 436 VVFQ 439 (586)
T ss_pred eeee
Confidence 9997
No 29
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=100.00 E-value=9.2e-51 Score=351.92 Aligned_cols=155 Identities=51% Similarity=0.836 Sum_probs=126.1
Q ss_pred EEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCccccce
Q 044741 42 IRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSILDSAT 117 (196)
Q Consensus 42 i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~~sat 117 (196)
|+|++||.|+|+|||+|||++|+.++.|++|+|+||+|+|+|.|++.|++|+|+|+++++|+|+++.. .++..++|
T Consensus 2 i~Va~dG~gdf~TIq~Aida~p~~~~~~~~I~I~~G~Y~E~V~i~~~k~~v~l~G~~~~~tiI~~~~~~~~~~~t~~saT 81 (298)
T PF01095_consen 2 IVVAQDGSGDFTTIQAAIDAAPDNNTSRYTIFIKPGTYREKVTIPRSKPNVTLIGEGRDKTIITGNDNAADGGGTFRSAT 81 (298)
T ss_dssp EEE-TTSTSSBSSHHHHHHHS-SSSSS-EEEEE-SEEEE--EEE-STSTTEEEEES-TTTEEEEE---TTTB-HCGGC-S
T ss_pred eEECCCCCCCccCHHHHHHhchhcCCceEEEEEeCeeEccccEeccccceEEEEecCCCceEEEEecccccccccccccc
Confidence 78999999999999999999999888899999999999999999999999999999999999998632 24788999
Q ss_pred EEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcceeeC
Q 044741 118 LTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANSLFE 196 (196)
Q Consensus 118 ~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a~f~ 196 (196)
|.+.+++|+++||||+|++|. ..||+||++.+||+.|++|+|.|+|||||++.+|+||++|+|||+||||||+|++|||
T Consensus 82 ~~v~a~~f~~~nit~~Nt~g~~~~qAvAl~~~~d~~~f~~c~~~g~QDTL~~~~~r~y~~~c~IeG~vDFIfG~~~a~f~ 161 (298)
T PF01095_consen 82 FSVNADDFTAENITFENTAGPSGGQAVALRVSGDRAAFYNCRFLGYQDTLYANGGRQYFKNCYIEGNVDFIFGNGTAVFE 161 (298)
T ss_dssp EEE-STT-EEEEEEEEEHCSGSG----SEEET-TSEEEEEEEEE-STT-EEE-SSEEEEES-EEEESEEEEEESSEEEEE
T ss_pred ccccccceeeeeeEEecCCCCcccceeeeeecCCcEEEEEeEEccccceeeeccceeEEEeeEEEecCcEEECCeeEEee
Confidence 999999999999999999976 4699999999999999999999999999999999999999999999999999999996
No 30
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2.4e-50 Score=373.41 Aligned_cols=158 Identities=34% Similarity=0.552 Sum_probs=150.0
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCccc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSILD 114 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~~ 114 (196)
...++|++||+|+|+|||+||+++|+++++|++|+|+||+|+|+|.|++.|++|+|+|++++.|+|+++.. ..++.
T Consensus 257 ~~~~~Va~dGsg~f~tI~~Av~a~p~~~~~~~vI~ik~GvY~E~V~i~~~k~~i~~~G~g~~~tiIt~~~~~~dg~~t~~ 336 (565)
T PLN02468 257 KADIVVAKDGSGKYKTISEALKDVPEKSEKRTIIYVKKGVYFENVRVEKKKWNVVMVGDGMSKTIVSGSLNFVDGTPTFS 336 (565)
T ss_pred CCcEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCceEEEEEecCCCCeEEEEecCCCCCEEEeCCccCCCCCccc
Confidence 35789999999999999999999999989999999999999999999999999999999999999998753 34789
Q ss_pred cceEEeecCcEEEEEeEEEecCCCC-CceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcce
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSY-GKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANS 193 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~-~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a 193 (196)
++||.|.+++|+++||+|+|++|+. +||+||++.+|+++||||+|+|||||||++.+||||++|+|+|+||||||+|++
T Consensus 337 saT~~v~~~~f~a~~itf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~~rq~y~~C~I~GtvDFIFG~a~a 416 (565)
T PLN02468 337 TATFAVFGKGFMARDMGFRNTAGPIKHQAVALMSSADLSVFYRCTMDAFQDTLYAHAQRQFYRECNIYGTVDFIFGNSAV 416 (565)
T ss_pred eeeeeEECCCeEEEEEEEEeCCCCCCCceEEEEEcCCcEEEEEeEEEeccchhccCCCceEEEeeEEecccceeeccceE
Confidence 9999999999999999999999874 599999999999999999999999999999999999999999999999999999
Q ss_pred eeC
Q 044741 194 LFE 196 (196)
Q Consensus 194 ~f~ 196 (196)
|||
T Consensus 417 vfq 419 (565)
T PLN02468 417 VFQ 419 (565)
T ss_pred EEe
Confidence 997
No 31
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=100.00 E-value=1.2e-49 Score=355.60 Aligned_cols=157 Identities=31% Similarity=0.401 Sum_probs=140.8
Q ss_pred EEEEE--cCCCCCCcchHHHHHHhCC-CCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCC--CCCeEEEcCC------
Q 044741 40 VLIRV--EKYGRGDFRTIQEAIDSVP-DNNSELVFISVAPGIYREKIIVPANKPFITISGTK--ASRTKITWSD------ 108 (196)
Q Consensus 40 ~~i~V--~~~g~g~f~TIq~Ai~aap-~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~--~~~t~I~~~~------ 108 (196)
..++| +++|+|+|+|||+|||+++ .++.+|++|+|+||+|+|+|.||++||+|||+|++ +++|+|+++.
T Consensus 80 ~~~vV~~a~dGsGdf~TIQaAIdAa~~~~~~~r~~I~Ik~GvY~EkV~Ip~~kp~ItL~G~G~~~~~TvIt~~~~~~~~~ 159 (422)
T PRK10531 80 PDFVVGPAGTQGVTHTTVQAAVDAAIAKRTNKRQYIAVMPGTYQGTVYVPAAAPPITLYGTGEKPIDVKIGLALDGEMSP 159 (422)
T ss_pred CcEEEecCCCCCCCccCHHHHHhhccccCCCceEEEEEeCceeEEEEEeCCCCceEEEEecCCCCCceEEEecCcccccc
Confidence 57789 7788889999999999875 55677999999999999999999999999999976 5689999872
Q ss_pred --------------------------------CCCccccceEEeecCcEEEEEeEEEecCCC-----CCceEEEEEeCCc
Q 044741 109 --------------------------------GGSILDSATLTVLASHFVARSLTIQNTYGS-----YGKAVALRVSADR 151 (196)
Q Consensus 109 --------------------------------~~~t~~sat~~v~a~~~~~~nlti~Ns~g~-----~~qa~Al~v~~d~ 151 (196)
..+++.++||.|.+++|+++||||+|+++. .+|||||++++||
T Consensus 160 ~~~~~~~~~~g~~~~~~p~~y~~d~~~~~~~~~~gT~~SATv~v~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~GDr 239 (422)
T PRK10531 160 ADWRANVNPRGKYMPGKPAWYMYDSCQSKRAATIGTLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDK 239 (422)
T ss_pred ccccccccccccccccccccccccccccccCCCcCceeeEEEEEECCCEEEEeeEEEeCCCCCCCCCcceeEEEEEcCCc
Confidence 013668899999999999999999999973 3599999999999
Q ss_pred EEEEccEEeeceeEEEe------------CCCceeEecCEEEccceeEecCcceeeC
Q 044741 152 AAFYGCRILSYQHTLLD------------DTGNHYYSKCYIEGATDFISGNANSLFE 196 (196)
Q Consensus 152 ~~~~~c~~~g~QDTl~~------------~~gr~~f~~c~I~G~vDfIfG~g~a~f~ 196 (196)
+.|++|+|+|+|||||+ +.|||||++|+|||+||||||+|++|||
T Consensus 240 a~fy~C~flG~QDTLy~~~~~~~~~~~~~~~gRqYf~~CyIeG~VDFIFG~g~AvFe 296 (422)
T PRK10531 240 VQIENVNILGRQDTFFVTNSGVQNRLETDRQPRTYVKNSYIEGDVDFVFGRGAVVFD 296 (422)
T ss_pred EEEEeeEEecccceeeeccccccccccccccccEEEEeCEEeecccEEccCceEEEE
Confidence 99999999999999998 3569999999999999999999999997
No 32
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=4.2e-50 Score=373.16 Aligned_cols=158 Identities=36% Similarity=0.607 Sum_probs=150.2
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCC----CCccc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDG----GSILD 114 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~----~~t~~ 114 (196)
...++|++||+|+|+|||+||+++|+.+.+|++|+|+||+|+|+|.|++.|++|+|+|+++++|+|+++.. ..|+.
T Consensus 274 ~~~~vVa~dGsG~f~TI~~Av~a~p~~~~~r~vI~ik~GvY~E~V~i~~~k~ni~l~Gdg~~~TiIt~~~~~~~g~~t~~ 353 (587)
T PLN02313 274 KADATVAADGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKKNIMFLGDGRGKTIITGSRNVVDGSTTFH 353 (587)
T ss_pred CCCEEECCCCCCCCccHHHHHHhccccCCceEEEEEeCceeEEEEEeCCCCCeEEEEecCCCccEEEeCCcccCCCCcee
Confidence 34789999999999999999999999888999999999999999999999999999999999999998754 35789
Q ss_pred cceEEeecCcEEEEEeEEEecCCC-CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcce
Q 044741 115 SATLTVLASHFVARSLTIQNTYGS-YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANS 193 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a 193 (196)
++||.+.+++|+++||||+|++|+ .+||+||++.+|+++||+|+|+|||||||++.+||||++|+|+|+||||||+|++
T Consensus 354 sat~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~g~QDTLy~~~~rq~y~~c~I~GtvDFIFG~a~a 433 (587)
T PLN02313 354 SATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAA 433 (587)
T ss_pred eEEEEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeEecccchhccCCCcEEEEeeEEeeccceeccceeE
Confidence 999999999999999999999987 4599999999999999999999999999999999999999999999999999999
Q ss_pred eeC
Q 044741 194 LFE 196 (196)
Q Consensus 194 ~f~ 196 (196)
|||
T Consensus 434 vfq 436 (587)
T PLN02313 434 VLQ 436 (587)
T ss_pred EEE
Confidence 996
No 33
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-40 Score=282.07 Aligned_cols=147 Identities=35% Similarity=0.519 Sum_probs=132.3
Q ss_pred CCcchHHHHHHhCCCCC-CceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCC--CeEEEcCCCC----------------
Q 044741 50 GDFRTIQEAIDSVPDNN-SELVFISVAPGIYREKIIVPANKPFITISGTKAS--RTKITWSDGG---------------- 110 (196)
Q Consensus 50 g~f~TIq~Ai~aap~~~-~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~--~t~I~~~~~~---------------- 110 (196)
.+|+|||+|||+++... .+|+.|.||+|+|+|.|.|++..+.|||+|++.+ .|+|..+..+
T Consensus 92 ~~f~TIQaAvdaA~~~~~~kr~yI~vk~GvY~e~v~Vp~~~~~ITLyGed~~~~~tvIg~n~aagp~np~~~m~n~c~ss 171 (405)
T COG4677 92 VTFTTIQAAVDAAIIKRTNKRQYIAVKAGVYQETVYVPAAPGGITLYGEDEKPIDTVIGLNLAAGPGNPAGYMYNSCQSS 171 (405)
T ss_pred cchHHHHHHHhhhcccCCCceEEEEEccceeceeEEecCCCCceeEEecCCCCcceEEEEecCCCCCCccceeecccccc
Confidence 48999999999887654 4899999999999999999987777999999987 8999876432
Q ss_pred -----CccccceEEeecCcEEEEEeEEEecCCC-----CCceEEEEEeCCcEEEEccEEeeceeEEEeCCC---------
Q 044741 111 -----SILDSATLTVLASHFVARSLTIQNTYGS-----YGKAVALRVSADRAAFYGCRILSYQHTLLDDTG--------- 171 (196)
Q Consensus 111 -----~t~~sat~~v~a~~~~~~nlti~Ns~g~-----~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~g--------- 171 (196)
++..++++++..++|.++||||+|+.|+ ..+|+||+.+|||+.|+||+++|+|||||...+
T Consensus 172 ~~~tigt~~Sat~~v~~ndf~~~nlT~en~~gd~~lagn~~AVaL~~dgDka~frnv~llg~QdTlFv~~~~~~~~~~tn 251 (405)
T COG4677 172 RSATIGTLCSATFWVQNNDFQLQNLTIENTLGDGVLAGNHPAVALATDGDKAIFRNVNLLGNQDTLFVGNSGVQNRLETN 251 (405)
T ss_pred hhhhhhhhhhhhheeecCCcccccceeecccCCccccCCceeEEEEecCCceeeeeeeEeeccceEEecCCCCccccccC
Confidence 2567899999999999999999999976 348999999999999999999999999998766
Q ss_pred ---ceeEecCEEEccceeEecCcceeeC
Q 044741 172 ---NHYYSKCYIEGATDFISGNANSLFE 196 (196)
Q Consensus 172 ---r~~f~~c~I~G~vDfIfG~g~a~f~ 196 (196)
|+||+||||+|+||||||+|.++|+
T Consensus 252 ~~~R~yftNsyI~GdvDfIfGsgtaVFd 279 (405)
T COG4677 252 RQPRTYFTNSYIEGDVDFIFGSGTAVFD 279 (405)
T ss_pred cchhhheecceecccceEEeccceEEec
Confidence 8899999999999999999999996
No 34
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=7.3e-39 Score=293.17 Aligned_cols=127 Identities=35% Similarity=0.572 Sum_probs=116.4
Q ss_pred cEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCC----Cccc
Q 044741 39 AVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGG----SILD 114 (196)
Q Consensus 39 a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~----~t~~ 114 (196)
...++|++||+|+|+|||+||+++|+++ +++.|+|++++.. +|++
T Consensus 213 ~~~~~Va~dGsG~f~tiq~Ai~a~p~~~-------------------------------g~~~TiIt~~~~~~~g~~t~~ 261 (497)
T PLN02698 213 KANAVVAKDGTGNYETVSEAITAAHGNH-------------------------------GKYSTVIVGDDSVTGGTSVPD 261 (497)
T ss_pred CceEEEcCCCCCCcccHHHHHHhhhhcC-------------------------------CCCceEEEeCCcccCCCcccc
Confidence 4588999999999999999999999864 3447888877543 4789
Q ss_pred cceEEeecCcEEEEEeEEEecCCCC-CceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecCcce
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSY-GKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANS 193 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~-~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~g~a 193 (196)
++||.|.+++|+++||||+|++|+. .||+||++.+|++.||+|+|+|||||||++.+||||++|+|+|+||||||+|++
T Consensus 262 SaT~~v~~~~F~a~nitf~Ntag~~~~QAvAl~v~~D~~~fy~c~~~G~QDTLy~~~~rqyy~~C~I~G~vDFIFG~a~a 341 (497)
T PLN02698 262 TATFTITGDGFIARDIGFKNAAGPKGEQAIALSITSDHSVLYRCSIAGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAA 341 (497)
T ss_pred ceeEEEECCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeecccchheeCCCcEEEEeeEEEeccceEecccce
Confidence 9999999999999999999999874 499999999999999999999999999999999999999999999999999999
Q ss_pred eeC
Q 044741 194 LFE 196 (196)
Q Consensus 194 ~f~ 196 (196)
+||
T Consensus 342 vf~ 344 (497)
T PLN02698 342 VFQ 344 (497)
T ss_pred eec
Confidence 997
No 35
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=99.64 E-value=5.8e-15 Score=129.15 Aligned_cols=118 Identities=19% Similarity=0.280 Sum_probs=95.2
Q ss_pred HHHHHHhCCCCCCceEEEEEcCCeEe--eeEEEcCCCCcEEEecCCCCCeEEEcCCCCCccccceEEeecCcEEEEEeEE
Q 044741 55 IQEAIDSVPDNNSELVFISVAPGIYR--EKIIVPANKPFITISGTKASRTKITWSDGGSILDSATLTVLASHFVARSLTI 132 (196)
Q Consensus 55 Iq~Ai~aap~~~~~~~~I~I~~G~Y~--E~v~I~~~k~~itl~G~~~~~t~I~~~~~~~t~~sat~~v~a~~~~~~nlti 132 (196)
||+||++|++++ +|+|+||+|+ |.|.|+ |++|||+|++++.++|++.... .....+.+.+++++++||++
T Consensus 1 iQ~Ai~~A~~GD----tI~l~~G~Y~~~~~l~I~--~~~Iti~G~g~~~tvid~~~~~--~~~~~i~v~a~~VtI~~ltI 72 (314)
T TIGR03805 1 LQEALIAAQPGD----TIVLPEGVFQFDRTLSLD--ADGVTIRGAGMDETILDFSGQV--GGAEGLLVTSDDVTLSDLAV 72 (314)
T ss_pred CHhHHhhCCCCC----EEEECCCEEEcceeEEEe--CCCeEEEecCCCccEEecccCC--CCCceEEEEeCCeEEEeeEE
Confidence 799999999999 9999999999 899994 4569999999888999886532 23577899999999999999
Q ss_pred EecCCCCCceEEEEE-eCCcEEEEccEEee--------ceeEEEeCCCc-eeEecCEEEccce
Q 044741 133 QNTYGSYGKAVALRV-SADRAAFYGCRILS--------YQHTLLDDTGN-HYYSKCYIEGATD 185 (196)
Q Consensus 133 ~Ns~g~~~qa~Al~v-~~d~~~~~~c~~~g--------~QDTl~~~~gr-~~f~~c~I~G~vD 185 (196)
+|+.+. ++++ .++++.+++|++.+ ..+.+|....+ ..+++|+|+|+-|
T Consensus 73 ~~~~~~-----GI~v~~s~~i~I~n~~i~~~~~~~~~~~~~GI~~~~s~~v~I~~n~i~g~~d 130 (314)
T TIGR03805 73 ENTKGD-----GVKVKGSDGIIIRRLRVEWTGGPKSSNGAYGIYPVESTNVLVEDSYVRGASD 130 (314)
T ss_pred EcCCCC-----eEEEeCCCCEEEEeeEEEeccCccccCCcceEEEeccCCEEEECCEEECCCc
Confidence 998643 4444 56788888888873 34667776554 4888888888877
No 36
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=99.18 E-value=4.2e-10 Score=101.90 Aligned_cols=118 Identities=19% Similarity=0.192 Sum_probs=88.1
Q ss_pred chHHHHHHhCCCCCCceEEEEEcCCeEe-eeEEEcCCCCcEEEecCCCCCe--EEEcCCCCCccccceEEeecCcEEEEE
Q 044741 53 RTIQEAIDSVPDNNSELVFISVAPGIYR-EKIIVPANKPFITISGTKASRT--KITWSDGGSILDSATLTVLASHFVARS 129 (196)
Q Consensus 53 ~TIq~Ai~aap~~~~~~~~I~I~~G~Y~-E~v~I~~~k~~itl~G~~~~~t--~I~~~~~~~t~~sat~~v~a~~~~~~n 129 (196)
+.||+||+++.+++ .+|.|.||+|+ +.+.|+ +| ++|.|+. +.+ +|++. .+..+.+.++++++++
T Consensus 55 ~ALQaAIdaAa~gG---~tV~Lp~G~Y~~G~L~L~--sp-ltL~G~~-gAt~~vIdG~------~~lIiai~A~nVTIsG 121 (455)
T TIGR03808 55 RALQRAIDEAARAQ---TPLALPPGVYRTGPLRLP--SG-AQLIGVR-GATRLVFTGG------PSLLSSEGADGIGLSG 121 (455)
T ss_pred HHHHHHHHHhhcCC---CEEEECCCceecccEEEC--CC-cEEEecC-CcEEEEEcCC------ceEEEEecCCCeEEEe
Confidence 35999999877443 18999999996 999994 34 9999985 233 35433 2355699999999999
Q ss_pred eEEEecCCC-CCceEEEEE-eCCcEEEEccEEeec-eeEEEeCCCceeEecCEEEcc
Q 044741 130 LTIQNTYGS-YGKAVALRV-SADRAAFYGCRILSY-QHTLLDDTGNHYYSKCYIEGA 183 (196)
Q Consensus 130 lti~Ns~g~-~~qa~Al~v-~~d~~~~~~c~~~g~-QDTl~~~~gr~~f~~c~I~G~ 183 (196)
++|.|+..+ ..+..+|++ .++++.+++|+|.+. -.++|+++.+....++.|.|+
T Consensus 122 LtIdGsG~dl~~rdAgI~v~~a~~v~Iedn~L~gsg~FGI~L~~~~~~I~~N~I~g~ 178 (455)
T TIGR03808 122 LTLDGGGIPLPQRRGLIHCQGGRDVRITDCEITGSGGNGIWLETVSGDISGNTITQI 178 (455)
T ss_pred eEEEeCCCcccCCCCEEEEccCCceEEEeeEEEcCCcceEEEEcCcceEecceEecc
Confidence 999999855 234445665 689999999999999 599999877644444444444
No 37
>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).
Probab=99.11 E-value=2.3e-09 Score=90.92 Aligned_cols=126 Identities=21% Similarity=0.326 Sum_probs=86.9
Q ss_pred CCcchHHHHHHhCCCCCCceEEEEEcCCeEeee------EEEcCCCCcEEEecCCCCC----eEEEcCCC------CCc-
Q 044741 50 GDFRTIQEAIDSVPDNNSELVFISVAPGIYREK------IIVPANKPFITISGTKASR----TKITWSDG------GSI- 112 (196)
Q Consensus 50 g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~------v~I~~~k~~itl~G~~~~~----t~I~~~~~------~~t- 112 (196)
..|+||++|++.|++++ +|+|.||+|+|. +.| ++.|+|+|+...+ +++.+... .+.
T Consensus 13 ~P~~Ti~~A~~~a~~g~----~i~l~~GtY~~~~ge~fPi~i---~~gVtl~G~~~~kG~~~il~~g~~~~~~I~g~~~~ 85 (246)
T PF07602_consen 13 APFKTITKALQAAQPGD----TIQLAPGTYSEATGETFPIII---KPGVTLIGNESNKGQIDILITGGGTGPTISGGGPD 85 (246)
T ss_pred cCHHHHHHHHHhCCCCC----EEEECCceeccccCCcccEEe---cCCeEEeecccCCCcceEEecCCceEEeEeccCcc
Confidence 56999999999999999 999999999986 456 3459999975321 22222110 000
Q ss_pred -cccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeec-eeEEEeCCC--ceeEecCEEEccc
Q 044741 113 -LDSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSY-QHTLLDDTG--NHYYSKCYIEGAT 184 (196)
Q Consensus 113 -~~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~-QDTl~~~~g--r~~f~~c~I~G~v 184 (196)
....+..+.+++.++++++|+|... .+..++++.+....+.||.|.+. ++.++...- ..-+.+..|+|+.
T Consensus 86 ~~~qn~tI~~~~~~~i~GvtItN~n~--~~g~Gi~Iess~~tI~Nntf~~~~~~GI~v~g~~~~~~i~~~vI~GN~ 159 (246)
T PF07602_consen 86 LSGQNVTIILANNATISGVTITNPNI--ARGTGIWIESSSPTIANNTFTNNGREGIFVTGTSANPGINGNVISGNS 159 (246)
T ss_pred ccceeEEEEecCCCEEEEEEEEcCCC--CcceEEEEecCCcEEEeeEEECCccccEEEEeeecCCcccceEeecce
Confidence 0111222346889999999999942 46678899888999999999986 788876321 2344555666664
No 38
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=99.08 E-value=7.2e-10 Score=100.04 Aligned_cols=119 Identities=26% Similarity=0.407 Sum_probs=74.3
Q ss_pred chHHHHHHhCCCCCCceEEEEEcCCeEee-eEEEc----CCCCcEEEecCCCCCeEEEcCCCCCccccceEEeecCcEEE
Q 044741 53 RTIQEAIDSVPDNNSELVFISVAPGIYRE-KIIVP----ANKPFITISGTKASRTKITWSDGGSILDSATLTVLASHFVA 127 (196)
Q Consensus 53 ~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E-~v~I~----~~k~~itl~G~~~~~t~I~~~~~~~t~~sat~~v~a~~~~~ 127 (196)
+.+|+||++|.+|| +|.|++|+|.+ ++.+. +.+ ||||..+.+.+++|++. ..|.+.++++++
T Consensus 5 ~~lq~Ai~~a~pGD----~I~L~~Gty~~~~i~~~~~GT~~~-PItl~Ae~~G~vvi~G~--------s~l~i~G~yl~v 71 (425)
T PF14592_consen 5 AELQSAIDNAKPGD----TIVLADGTYKDVEIVFKGSGTAAK-PITLRAENPGKVVITGE--------SNLRISGSYLVV 71 (425)
T ss_dssp HHHHHHHHH--TT-----EEEE-SEEEET-EEEE-S--BTTB--EEEEESSTTSEEEEES---------EEEE-SSSEEE
T ss_pred HHHHHHHHhCCCCC----EEEECCceeecceEEEEecccCCC-CEEEEecCCCeEEEecc--------eeEEEEeeeEEE
Confidence 67999999999999 99999999996 55654 233 49999999999999877 568999999999
Q ss_pred EEeEEEecCCCCCceEEEE-----EeCCcEEEEccEEeece------eEEEe----CCCce-eEecCEEEccc
Q 044741 128 RSLTIQNTYGSYGKAVALR-----VSADRAAFYGCRILSYQ------HTLLD----DTGNH-YYSKCYIEGAT 184 (196)
Q Consensus 128 ~nlti~Ns~g~~~qa~Al~-----v~~d~~~~~~c~~~g~Q------DTl~~----~~gr~-~f~~c~I~G~v 184 (196)
++|.|+|.+.+....+..+ ..++++.+.+|.|..+. +..|+ -.|++ .+.+|+++|..
T Consensus 72 ~GL~F~ng~~~~~~vi~fr~~~~~~~a~~~RlT~~vi~~fn~~~~~~~~~wv~~~~l~G~~NrvDhn~F~gK~ 144 (425)
T PF14592_consen 72 SGLKFKNGYTPTGAVISFRNGGDASYANHCRLTNCVIDDFNNPDREESDNWVTIYSLYGKHNRVDHNYFQGKT 144 (425)
T ss_dssp ES-EEEEE---TTT--TTS--SEEE-SSS-EEES-EEES--SS-S-SEEE---TT-----S-EEES-EEE---
T ss_pred eCeEEecCCCCCCceEEeecCCCcceecceEEEeEEeeccCCcccccCceEEEEEEeeccCceEEccEeeccc
Confidence 9999999875433322222 36889999999999863 34455 23544 78889888754
No 39
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=98.99 E-value=1.1e-08 Score=89.53 Aligned_cols=125 Identities=17% Similarity=0.269 Sum_probs=98.8
Q ss_pred CCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEeeeEEEcCCCCcEEEecCCCCCeEEEcCCCCCccccc
Q 044741 37 STAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGGSILDSA 116 (196)
Q Consensus 37 ~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~E~v~I~~~k~~itl~G~~~~~t~I~~~~~~~t~~sa 116 (196)
+.|.++.|.. | ..+| |.+++ .+.|. |+|.|+++|+ ++ +||.|+. ..++.+..+ +.
T Consensus 16 ~qaa~v~v~d-g----~plq-----a~pgd----~~~i~-g~~~g~~vIn--r~-l~l~ge~--ga~l~g~g~-----G~ 70 (408)
T COG3420 16 AQAATVRVID-G----LPLQ-----AKPGD----YYGIS-GRYAGNFVIN--RA-LTLRGEN--GAVLDGGGK-----GS 70 (408)
T ss_pred hhhceEEecc-C----Cccc-----cCCCc----EEEEe-eeecccEEEc--cc-eeecccc--ccEEecCCc-----cc
Confidence 4555555543 2 3567 67777 78888 9999999994 45 9999987 677766643 58
Q ss_pred eEEeecCcEEEEEeEEEecCCC-CCceEEEEE--eCCcEEEEccEEeeceeEEEeCCC-ceeEecCEEEcccee
Q 044741 117 TLTVLASHFVARSLTIQNTYGS-YGKAVALRV--SADRAAFYGCRILSYQHTLLDDTG-NHYYSKCYIEGATDF 186 (196)
Q Consensus 117 t~~v~a~~~~~~nlti~Ns~g~-~~qa~Al~v--~~d~~~~~~c~~~g~QDTl~~~~g-r~~f~~c~I~G~vDf 186 (196)
++++.++++++|+|+++++... ..+..++.+ .+....+++|.+.|.-..+|+++. +...+...|+|.-|.
T Consensus 71 ~vtv~aP~~~v~Gl~vr~sg~~lp~m~agI~v~~~at~A~Vr~N~l~~n~~Gi~l~~s~d~~i~~n~i~G~~~~ 144 (408)
T COG3420 71 YVTVAAPDVIVEGLTVRGSGRSLPAMDAGIFVGRTATGAVVRHNDLIGNSFGIYLHGSADVRIEGNTIQGLADL 144 (408)
T ss_pred EEEEeCCCceeeeEEEecCCCCcccccceEEeccCcccceEEcccccccceEEEEeccCceEEEeeEEeecccc
Confidence 8999999999999999999855 456677777 578999999999999999999864 458888888887664
No 40
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=98.23 E-value=5.2e-05 Score=61.51 Aligned_cols=110 Identities=22% Similarity=0.301 Sum_probs=67.8
Q ss_pred chHHHHHH-hCCCCCCceEEEEEcCCeEe--eeEEEcCCCCcEEEecCCCCCeEEEcCCCCCccc--cceEEeec--Cc-
Q 044741 53 RTIQEAID-SVPDNNSELVFISVAPGIYR--EKIIVPANKPFITISGTKASRTKITWSDGGSILD--SATLTVLA--SH- 124 (196)
Q Consensus 53 ~TIq~Ai~-aap~~~~~~~~I~I~~G~Y~--E~v~I~~~k~~itl~G~~~~~t~I~~~~~~~t~~--sat~~v~a--~~- 124 (196)
.-||+||+ ++..+. -+|+++||+|+ ..+.++ ++++|+|++...+++.......... .......+ .+
T Consensus 19 ~Aiq~Ai~~~~~~~g---~~v~~P~G~Y~i~~~l~~~---s~v~l~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (225)
T PF12708_consen 19 AAIQAAIDAAAAAGG---GVVYFPPGTYRISGTLIIP---SNVTLRGAGGNSTILFLSGSGDSFSVVPGIGVFDSGNSNI 92 (225)
T ss_dssp HHHHHHHHHHCSTTS---EEEEE-SEEEEESS-EEE----TTEEEEESSTTTEEEEECTTTSTSCCEEEEEECCSCSCCE
T ss_pred HHHHHhhhhcccCCC---eEEEEcCcEEEEeCCeEcC---CCeEEEccCCCeeEEEecCcccccccccceeeeecCCCCc
Confidence 56999993 333322 39999999999 347773 4699999998888887443321111 01122222 23
Q ss_pred -EEEEEeEEEecCCCCC-ceEEEEEe-CCcEEEEccEEeec-eeEEEe
Q 044741 125 -FVARSLTIQNTYGSYG-KAVALRVS-ADRAAFYGCRILSY-QHTLLD 168 (196)
Q Consensus 125 -~~~~nlti~Ns~g~~~-qa~Al~v~-~d~~~~~~c~~~g~-QDTl~~ 168 (196)
..++||+|.+..-... ...++... +..+.++||++... .+.++.
T Consensus 93 ~~~i~nl~i~~~~~~~~~~~~~i~~~~~~~~~i~nv~~~~~~~~~i~~ 140 (225)
T PF12708_consen 93 GIQIRNLTIDGNGIDPNNNNNGIRFNSSQNVSISNVRIENSGGDGIYF 140 (225)
T ss_dssp EEEEEEEEEEETCGCE-SCEEEEEETTEEEEEEEEEEEES-SS-SEEE
T ss_pred eEEEEeeEEEcccccCCCCceEEEEEeCCeEEEEeEEEEccCccEEEE
Confidence 3499999998774322 25677774 57889999998864 455544
No 41
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=97.60 E-value=0.0013 Score=59.87 Aligned_cols=70 Identities=13% Similarity=0.054 Sum_probs=43.0
Q ss_pred ecCcEEEEEeEEEecCCC----------------------CCceEEEEE-eCCcEEEEccEEeeceeEEEeCCCc--eeE
Q 044741 121 LASHFVARSLTIQNTYGS----------------------YGKAVALRV-SADRAAFYGCRILSYQHTLLDDTGN--HYY 175 (196)
Q Consensus 121 ~a~~~~~~nlti~Ns~g~----------------------~~qa~Al~v-~~d~~~~~~c~~~g~QDTl~~~~gr--~~f 175 (196)
...++.++|||++|+..- ....-++.+ .++++.+++|.|...-|.+-...|+ ..+
T Consensus 162 ~~~nv~i~gitl~nSp~w~i~~~~~~~v~i~~v~I~~~~~spNtDGidi~~s~nV~I~n~~I~~GDDcIaiksg~~nI~I 241 (404)
T PLN02188 162 NMNNTVVRGITSVNSKFFHIALVECRNFKGSGLKISAPSDSPNTDGIHIERSSGVYISDSRIGTGDDCISIGQGNSQVTI 241 (404)
T ss_pred eeeeEEEeCeEEEcCCCeEEEEEccccEEEEEEEEeCCCCCCCCCcEeeeCcccEEEEeeEEeCCCcEEEEccCCccEEE
Confidence 456788888888887521 001223444 3467888888888888888775554 366
Q ss_pred ecCEEEccceeEecC
Q 044741 176 SKCYIEGATDFISGN 190 (196)
Q Consensus 176 ~~c~I~G~vDfIfG~ 190 (196)
++|...+.--+-+|.
T Consensus 242 ~n~~c~~ghGisiGS 256 (404)
T PLN02188 242 TRIRCGPGHGISVGS 256 (404)
T ss_pred EEEEEcCCCcEEeCC
Confidence 666665433444444
No 42
>PLN03010 polygalacturonase
Probab=97.09 E-value=0.075 Score=48.51 Aligned_cols=53 Identities=6% Similarity=0.111 Sum_probs=32.7
Q ss_pred EeecCcEEEEEeEEEecCCC-------C---------------CceEEEEE-eCCcEEEEccEEeeceeEEEeCCC
Q 044741 119 TVLASHFVARSLTIQNTYGS-------Y---------------GKAVALRV-SADRAAFYGCRILSYQHTLLDDTG 171 (196)
Q Consensus 119 ~v~a~~~~~~nlti~Ns~g~-------~---------------~qa~Al~v-~~d~~~~~~c~~~g~QDTl~~~~g 171 (196)
.....++.++||+++|+..- . ...-++.+ .++++.+++|.+...-|.+-...|
T Consensus 162 ~~~~~nv~v~gitl~nsp~~~i~i~~~~nv~i~~i~I~a~~~s~NTDGiDi~~s~nV~I~n~~I~~gDDcIaiksg 237 (409)
T PLN03010 162 ISKCDNLTINGITSIDSPKNHISIKTCNYVAISKINILAPETSPNTDGIDISYSTNINIFDSTIQTGDDCIAINSG 237 (409)
T ss_pred EEeecCeEEeeeEEEcCCceEEEEeccccEEEEEEEEeCCCCCCCCCceeeeccceEEEEeeEEecCCCeEEecCC
Confidence 34467788888888877521 0 11223444 346677777777777777776655
No 43
>PLN02671 pectinesterase
Probab=96.70 E-value=0.029 Score=50.28 Aligned_cols=60 Identities=15% Similarity=0.303 Sum_probs=49.0
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
...+.+.++...++|..|...- + .|+....|..|++|.|+|.=|-+|- .|+.+|++|.|.
T Consensus 178 AVALrv~gDra~f~~c~f~G~Q-D-----TLy~~~gR~yf~~CyIeG~VDFIFG-~g~A~Fe~C~I~ 237 (359)
T PLN02671 178 AVALRISGDKAFFYKVRVLGAQ-D-----TLLDETGSHYFYQCYIQGSVDFIFG-NAKSLYQDCVIQ 237 (359)
T ss_pred EEEEEEcCccEEEEcceEeccc-c-----ccEeCCCcEEEEecEEEEeccEEec-ceeEEEeccEEE
Confidence 4568888999999999999332 2 3566778899999999999999986 488899999986
No 44
>PLN02793 Probable polygalacturonase
Probab=96.57 E-value=0.45 Score=43.91 Aligned_cols=60 Identities=2% Similarity=-0.056 Sum_probs=37.3
Q ss_pred ecCcEEEEEeEEEecCCC----------------------CCceEEEEE-eCCcEEEEccEEeeceeEEEeCCC--ceeE
Q 044741 121 LASHFVARSLTIQNTYGS----------------------YGKAVALRV-SADRAAFYGCRILSYQHTLLDDTG--NHYY 175 (196)
Q Consensus 121 ~a~~~~~~nlti~Ns~g~----------------------~~qa~Al~v-~~d~~~~~~c~~~g~QDTl~~~~g--r~~f 175 (196)
..++++++||+++|+..- ....-++.+ ..+++.++||.|...-|.+-...+ ...+
T Consensus 184 ~~~nv~v~gitl~nSp~~~i~~~~~~nv~i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~gDDcIaik~~s~nI~I 263 (443)
T PLN02793 184 KCKDLRVENLNVIDSQQMHIAFTNCRRVTISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRTGDDCISIVGNSSRIKI 263 (443)
T ss_pred eeccEEEECeEEEcCCCeEEEEEccCcEEEEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeCCCCeEEecCCcCCEEE
Confidence 467888888888888521 011223444 346778888888877777776432 2356
Q ss_pred ecCEE
Q 044741 176 SKCYI 180 (196)
Q Consensus 176 ~~c~I 180 (196)
++|..
T Consensus 264 ~n~~c 268 (443)
T PLN02793 264 RNIAC 268 (443)
T ss_pred EEeEE
Confidence 66665
No 45
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=96.57 E-value=0.21 Score=43.92 Aligned_cols=69 Identities=20% Similarity=0.184 Sum_probs=47.4
Q ss_pred CcEEEecCCCCCeEEEcCCCCCccccceEEee-cCcEEEEEeEEEecCCCCC--ceEEEEEeCCcEEEEccEEee-----
Q 044741 90 PFITISGTKASRTKITWSDGGSILDSATLTVL-ASHFVARSLTIQNTYGSYG--KAVALRVSADRAAFYGCRILS----- 161 (196)
Q Consensus 90 ~~itl~G~~~~~t~I~~~~~~~t~~sat~~v~-a~~~~~~nlti~Ns~g~~~--qa~Al~v~~d~~~~~~c~~~g----- 161 (196)
.|.||.|.+.+.+++-+ -|.++ ++|+.++||+|+-.+--.. .++-|.-++.++=+.+|.|.+
T Consensus 101 sNkTivG~g~~a~~~g~----------gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~ 170 (345)
T COG3866 101 SNKTIVGSGADATLVGG----------GLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNA 170 (345)
T ss_pred cccEEEeeccccEEEec----------eEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccc
Confidence 35677776655555432 36666 8999999999998872112 445555467788889999988
Q ss_pred ---ceeEEEe
Q 044741 162 ---YQHTLLD 168 (196)
Q Consensus 162 ---~QDTl~~ 168 (196)
..|.|..
T Consensus 171 ~~~h~DGl~D 180 (345)
T COG3866 171 SGSHGDGLVD 180 (345)
T ss_pred cccCCCccEE
Confidence 5677754
No 46
>PLN02480 Probable pectinesterase
Probab=96.39 E-value=0.073 Score=47.51 Aligned_cols=60 Identities=17% Similarity=0.136 Sum_probs=48.3
Q ss_pred eEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEcc
Q 044741 117 TLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGA 183 (196)
Q Consensus 117 t~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~ 183 (196)
.+.+.++...++|..|...- . .|+....|.-|++|.|+|.=|=+|-. |+.+|++|.|.-.
T Consensus 159 Al~v~gDra~f~~c~f~G~Q-----D-TLy~~~gR~yf~~C~IeG~VDFIFG~-g~a~fe~C~i~s~ 218 (343)
T PLN02480 159 AAFVGADKVAFYHCAFYSTH-----N-TLFDYKGRHYYHSCYIQGSIDFIFGR-GRSIFHNCEIFVI 218 (343)
T ss_pred EEEecCCcEEEEeeEEeccc-----c-eeEeCCCCEEEEeCEEEeeeeEEccc-eeEEEEccEEEEe
Confidence 45678999999999998332 2 36677889999999999999999874 8889999998743
No 47
>smart00656 Amb_all Amb_all domain.
Probab=95.99 E-value=0.1 Score=42.53 Aligned_cols=88 Identities=22% Similarity=0.242 Sum_probs=55.8
Q ss_pred eeEEEcCCCCcEEEecCCCCCeEEEcCCCCCccccceEEee-cCcEEEEEeEEEecCCCC-CceEEEEE-eCCcEEEEcc
Q 044741 81 EKIIVPANKPFITISGTKASRTKITWSDGGSILDSATLTVL-ASHFVARSLTIQNTYGSY-GKAVALRV-SADRAAFYGC 157 (196)
Q Consensus 81 E~v~I~~~k~~itl~G~~~~~t~I~~~~~~~t~~sat~~v~-a~~~~~~nlti~Ns~g~~-~qa~Al~v-~~d~~~~~~c 157 (196)
-.+.|+ ++.||.|++...+ |.+ .-|.+. ++++.++||+|++..... ...-||.+ .++++-+.+|
T Consensus 10 ~~i~v~---snkTI~G~~~~~~-i~g---------~gl~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~~~~~~VwIDHc 76 (190)
T smart00656 10 GTIIIN---SNKTIDGRGSKVE-IKG---------GGLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISIDGSSNVWIDHV 76 (190)
T ss_pred ceEEeC---CCCEEEecCCCcE-EEe---------eEEEEEecceEEEeCCEEECCccCCCCCCCEEEEeCCCeEEEEcc
Confidence 346663 5789999875543 332 235554 789999999999865321 12234444 5788999999
Q ss_pred EEeec---------eeEEEeC-C--CceeEecCEEE
Q 044741 158 RILSY---------QHTLLDD-T--GNHYYSKCYIE 181 (196)
Q Consensus 158 ~~~g~---------QDTl~~~-~--gr~~f~~c~I~ 181 (196)
.|... .|.+..- . -..-+.+|++.
T Consensus 77 t~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~~f~ 112 (190)
T smart00656 77 SLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFH 112 (190)
T ss_pred EeEcceeccCCCCCCCccEEECcccccEEEECceEe
Confidence 99987 5777542 1 23355666654
No 48
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=95.75 E-value=0.16 Score=47.69 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=41.3
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
..-.+.+.+|...++|..|...-. .|+.+..|.-|++|.|+|.=|=+|.+ ++.+|++|.|.
T Consensus 312 QAVAlrv~~D~~~fy~C~f~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avf~~C~i~ 372 (520)
T PLN02201 312 QAVALRSDSDLSVFYRCAMRGYQD------TLYTHTMRQFYRECRITGTVDFIFGD-ATAVFQNCQIL 372 (520)
T ss_pred ceEEEEEcCCcEEEEeeeeeccCC------eeEeCCCCEEEEeeEEeecccEEecC-ceEEEEccEEE
Confidence 345688889999999999984432 35566666667777777776666553 55566666554
No 49
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=95.75 E-value=0.45 Score=43.06 Aligned_cols=110 Identities=17% Similarity=0.269 Sum_probs=66.3
Q ss_pred chHHHHHHhCCCCCCceEEEEEcCCe-Ee--eeEEEcCCCCcEEEecCCCCCeEEEcCCCCCccccceEEee--------
Q 044741 53 RTIQEAIDSVPDNNSELVFISVAPGI-YR--EKIIVPANKPFITISGTKASRTKITWSDGGSILDSATLTVL-------- 121 (196)
Q Consensus 53 ~TIq~Ai~aap~~~~~~~~I~I~~G~-Y~--E~v~I~~~k~~itl~G~~~~~t~I~~~~~~~t~~sat~~v~-------- 121 (196)
+.+++||+.-. +|.+.||. |+ -+|.|+ + ...|+|.|+ .+.|...+.. + |.+.
T Consensus 55 eDle~~I~~ha-------KVaL~Pg~~Y~i~~~V~I~--~-~cYIiGnGA-~V~v~~~~~~-----~-f~v~~~~~~P~V 117 (386)
T PF01696_consen 55 EDLEEAIRQHA-------KVALRPGAVYVIRKPVNIR--S-CCYIIGNGA-TVRVNGPDRV-----A-FRVCMQSMGPGV 117 (386)
T ss_pred cCHHHHHHhcC-------EEEeCCCCEEEEeeeEEec--c-eEEEECCCE-EEEEeCCCCc-----e-EEEEcCCCCCeE
Confidence 46889998532 79999997 76 478883 3 499999973 4455555432 2 3332
Q ss_pred -c-CcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 122 -A-SHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 122 -a-~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
+ .++++.|+.|+.... .++ -+-....++.|++|.|.|+.-+=..-.+....+.|+-.|
T Consensus 118 ~gM~~VtF~ni~F~~~~~--~~g-~~f~~~t~~~~hgC~F~gf~g~cl~~~~~~~VrGC~F~~ 177 (386)
T PF01696_consen 118 VGMEGVTFVNIRFEGRDT--FSG-VVFHANTNTLFHGCSFFGFHGTCLESWAGGEVRGCTFYG 177 (386)
T ss_pred eeeeeeEEEEEEEecCCc--cce-eEEEecceEEEEeeEEecCcceeEEEcCCcEEeeeEEEE
Confidence 1 367777777775541 122 234466788999999999854433222333344444433
No 50
>PLN02773 pectinesterase
Probab=95.75 E-value=0.085 Score=46.59 Aligned_cols=61 Identities=11% Similarity=0.163 Sum_probs=47.5
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
....|.+.++...++|..|...- + .|+.+..|.-|++|.|+|.=|=+|- .|+.+|++|.|.
T Consensus 121 QAvAl~v~gDr~~f~~c~~~G~Q-D-----TL~~~~gr~yf~~c~IeG~VDFIFG-~g~a~Fe~c~i~ 181 (317)
T PLN02773 121 QAVAIRVTADRCAFYNCRFLGWQ-D-----TLYLHYGKQYLRDCYIEGSVDFIFG-NSTALLEHCHIH 181 (317)
T ss_pred cEEEEEecCccEEEEccEeeccc-c-----eeEeCCCCEEEEeeEEeecccEEee-ccEEEEEeeEEE
Confidence 34568888999999999998332 2 4667777888888888888888875 477888888885
No 51
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=95.70 E-value=0.17 Score=47.88 Aligned_cols=61 Identities=20% Similarity=0.255 Sum_probs=42.1
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
..-.+.+.+|...+++..|...-+ .|+.++.|.-|++|.|+|.=|-+|.+ |..+|++|.|.
T Consensus 336 QAVAl~v~~D~~~fy~c~~~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~c~i~ 396 (541)
T PLN02416 336 QAVALRVNADLVALYRCTINGYQD------TLYVHSFRQFYRECDIYGTIDYIFGN-AAVVFQACNIV 396 (541)
T ss_pred ceEEEEEcCccEEEEcceEecccc------hhccCCCceEEEeeEEeeccceeecc-ceEEEeccEEE
Confidence 345688889999999999984432 35556667777777777777776653 55666666663
No 52
>PLN02155 polygalacturonase
Probab=95.45 E-value=1.3 Score=40.30 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=37.8
Q ss_pred ecCcEEEEEeEEEecCCC----------------------CCceEEEEE-eCCcEEEEccEEeeceeEEEeCCCc--eeE
Q 044741 121 LASHFVARSLTIQNTYGS----------------------YGKAVALRV-SADRAAFYGCRILSYQHTLLDDTGN--HYY 175 (196)
Q Consensus 121 ~a~~~~~~nlti~Ns~g~----------------------~~qa~Al~v-~~d~~~~~~c~~~g~QDTl~~~~gr--~~f 175 (196)
...++++++|+++|+..- ....-++.+ ...++.+++|.|...-|.+-...|. ..+
T Consensus 152 ~~~nv~i~gitl~nSp~w~i~~~~~~nv~i~~v~I~~p~~~~NtDGidi~~s~nV~I~~~~I~~gDDcIaik~gs~nI~I 231 (394)
T PLN02155 152 SAKDVIISGVKSMNSQVSHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGDDCVAIGPGTRNFLI 231 (394)
T ss_pred EeeeEEEECeEEEcCCCeEEEEECeeeEEEEEEEEECCCCCCCCCccccccceeEEEEeeEEecCCceEEcCCCCceEEE
Confidence 346777777777777521 011123444 3567888888888888888776553 255
Q ss_pred ecCEEE
Q 044741 176 SKCYIE 181 (196)
Q Consensus 176 ~~c~I~ 181 (196)
++|+..
T Consensus 232 ~n~~c~ 237 (394)
T PLN02155 232 TKLACG 237 (394)
T ss_pred EEEEEE
Confidence 565543
No 53
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=95.41 E-value=0.24 Score=46.63 Aligned_cols=61 Identities=11% Similarity=0.212 Sum_probs=38.9
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
....+.+.+|...+++..|...-+ -|+.++.|.-|++|.|+|.=|=+|.+ ++.+|++|.|.
T Consensus 324 QAVAlrv~~Dra~fy~C~f~G~QD------TLy~~~~Rqyy~~C~IeGtVDFIFG~-a~avFq~C~i~ 384 (530)
T PLN02933 324 QAVALRSGSDHSAFYRCEFDGYQD------TLYVHSAKQFYRECDIYGTIDFIFGN-AAVVFQNCSLY 384 (530)
T ss_pred ceEEEEEcCCcEEEEEeEEEeccc------ccccCCCceEEEeeEEecccceeccC-ceEEEeccEEE
Confidence 345678889999999999985432 24455556666666666666655542 44555555553
No 54
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=95.27 E-value=0.14 Score=44.70 Aligned_cols=60 Identities=17% Similarity=0.261 Sum_probs=43.8
Q ss_pred ceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 116 ATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 116 at~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
..|.+.++...++|..|...- + .|+.++.+.-|++|.|+|.=|=+|- .+..+|++|.|.=
T Consensus 108 vAl~~~~d~~~f~~c~~~g~Q-D-----TL~~~~~r~y~~~c~IeG~vDFIfG-~~~a~f~~c~i~~ 167 (298)
T PF01095_consen 108 VALRVSGDRAAFYNCRFLGYQ-D-----TLYANGGRQYFKNCYIEGNVDFIFG-NGTAVFENCTIHS 167 (298)
T ss_dssp -SEEET-TSEEEEEEEEE-ST-T------EEE-SSEEEEES-EEEESEEEEEE-SSEEEEES-EEEE
T ss_pred eeeeecCCcEEEEEeEEcccc-c-----eeeeccceeEEEeeEEEecCcEEEC-CeeEEeeeeEEEE
Confidence 457888999999999997442 2 4677888999999999999999987 4778888888873
No 55
>PLN02218 polygalacturonase ADPG
Probab=95.10 E-value=1.1 Score=41.19 Aligned_cols=61 Identities=7% Similarity=0.078 Sum_probs=42.0
Q ss_pred ecCcEEEEEeEEEecCCC----------------------CCceEEEEEe-CCcEEEEccEEeeceeEEEeCCCc--eeE
Q 044741 121 LASHFVARSLTIQNTYGS----------------------YGKAVALRVS-ADRAAFYGCRILSYQHTLLDDTGN--HYY 175 (196)
Q Consensus 121 ~a~~~~~~nlti~Ns~g~----------------------~~qa~Al~v~-~d~~~~~~c~~~g~QDTl~~~~gr--~~f 175 (196)
...+++++||+++|+..- ....-++.+. ..++.+++|.|...-|.+-...|. ..+
T Consensus 199 ~~~nv~I~gitl~nSp~w~i~~~~~~nV~i~~v~I~a~~~spNTDGIdi~ss~nV~I~n~~I~tGDDcIaIksgs~nI~I 278 (431)
T PLN02218 199 NSKSLIVKNLRVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGTGDDCISIESGSQNVQI 278 (431)
T ss_pred ccccEEEeCeEEEcCCCEEEEEEceeeEEEEEEEEeCCCCCCCCCcEeecccceEEEEccEEecCCceEEecCCCceEEE
Confidence 457888888888887520 0112345553 467889999999888888877664 377
Q ss_pred ecCEEE
Q 044741 176 SKCYIE 181 (196)
Q Consensus 176 ~~c~I~ 181 (196)
++|+..
T Consensus 279 ~n~~c~ 284 (431)
T PLN02218 279 NDITCG 284 (431)
T ss_pred EeEEEE
Confidence 888774
No 56
>PLN03003 Probable polygalacturonase At3g15720
Probab=94.88 E-value=1.2 Score=41.25 Aligned_cols=60 Identities=12% Similarity=0.077 Sum_probs=39.3
Q ss_pred ecCcEEEEEeEEEecCCC----------------------CCceEEEEEe-CCcEEEEccEEeeceeEEEeCCCc--eeE
Q 044741 121 LASHFVARSLTIQNTYGS----------------------YGKAVALRVS-ADRAAFYGCRILSYQHTLLDDTGN--HYY 175 (196)
Q Consensus 121 ~a~~~~~~nlti~Ns~g~----------------------~~qa~Al~v~-~d~~~~~~c~~~g~QDTl~~~~gr--~~f 175 (196)
..+++.++||+++|+..- ....-++.+. .+++.++||.+...-|.+-...|. -.+
T Consensus 145 ~~~nv~I~gitl~NSp~w~i~i~~c~nV~i~~l~I~ap~~spNTDGIDi~~S~nV~I~n~~I~tGDDCIaiksgs~NI~I 224 (456)
T PLN03003 145 SCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHI 224 (456)
T ss_pred ecCCcEEeCeEEecCCcEEEEEeccccEEEEEEEEeCCCCCCCCCcEeecCcceEEEEecEEecCCCeEEeCCCCccEEE
Confidence 456777777777777520 0112345553 478899999999888988887664 266
Q ss_pred ecCEE
Q 044741 176 SKCYI 180 (196)
Q Consensus 176 ~~c~I 180 (196)
++|+.
T Consensus 225 ~n~~c 229 (456)
T PLN03003 225 SGIDC 229 (456)
T ss_pred EeeEE
Confidence 66654
No 57
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=94.85 E-value=0.21 Score=47.32 Aligned_cols=61 Identities=13% Similarity=0.213 Sum_probs=38.6
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
..-.+.+.+|...++|..|...-. .|+.++.|.-|++|.|+|.=|=+|.+ +..+|++|.|.
T Consensus 349 QAVAlrv~~D~~~f~~c~~~G~QD------TLy~~~~rq~y~~C~I~GtVDFIFG~-a~avfq~c~i~ 409 (553)
T PLN02708 349 QAVAFRSDSDLSVIENCEFLGNQD------TLYAHSLRQFYKSCRIQGNVDFIFGN-SAAVFQDCAIL 409 (553)
T ss_pred ceEEEEecCCcEEEEeeeeeeccc------cceeCCCceEEEeeEEeecCCEEecC-ceEEEEccEEE
Confidence 345688889999999999995532 24445555555566666665555542 45555555554
No 58
>smart00722 CASH Domain present in carbohydrate binding proteins and sugar hydrolses.
Probab=94.63 E-value=0.89 Score=33.69 Aligned_cols=99 Identities=14% Similarity=0.117 Sum_probs=65.4
Q ss_pred CCeEeeeEEEcCCC-CcEEEecCCCCCeEEE-cCCCCCccccceEEeecCcEEEEEeEEEec--CCC--CCceEEEEEeC
Q 044741 76 PGIYREKIIVPANK-PFITISGTKASRTKIT-WSDGGSILDSATLTVLASHFVARSLTIQNT--YGS--YGKAVALRVSA 149 (196)
Q Consensus 76 ~G~Y~E~v~I~~~k-~~itl~G~~~~~t~I~-~~~~~~t~~sat~~v~a~~~~~~nlti~Ns--~g~--~~qa~Al~v~~ 149 (196)
.|.|.+........ +++++.+++ .++|. +. .....+.+.++++..+++++.+. .|. .....++.-..
T Consensus 3 ~G~~~~~~~~~~~~~~~~~~~~~~--~~vi~~~~-----~~~~~~~i~~~~~~~~G~~~~~~~~~G~~~~~~~~~~~~~~ 75 (146)
T smart00722 3 NGIVLELLRIAVHYMGNVTNGGSG--GAVITDGS-----GRGSNITINSNDVRVDGITIGGSTVTGIYVSASGDGVIQNT 75 (146)
T ss_pred cCCeEEeccccccccCCeEeeCcC--CEEEEecC-----CcEEEEEEeCCCCEEECeEEEeEEeeCcccccCCceEecCc
Confidence 45555544432110 248888876 68887 33 23578889999999999999983 332 22334444567
Q ss_pred CcEEEEccEEeec----eeEEEeCCCc-eeEecCEEE
Q 044741 150 DRAAFYGCRILSY----QHTLLDDTGN-HYYSKCYIE 181 (196)
Q Consensus 150 d~~~~~~c~~~g~----QDTl~~~~gr-~~f~~c~I~ 181 (196)
++..++++.+.+. ...++..... ..+.+..|+
T Consensus 76 ~~~~i~~N~~~~~~~~~~~Gi~~~~~~~~~~~~N~i~ 112 (146)
T smart00722 76 GKNLIIDNVTINGTEGSGAGIVVTAGSEGLFIGNRII 112 (146)
T ss_pred cccEEEcceecCCCccceEEEEEECCccceEecCeEE
Confidence 8899999999986 8888876433 346676776
No 59
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=94.61 E-value=0.2 Score=47.35 Aligned_cols=61 Identities=15% Similarity=0.250 Sum_probs=42.3
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
..-.+.+.+|...+++..|...-. .|+.++.|.-|++|.|+|.=|-+|. +|+.+|++|.|.
T Consensus 331 QAVAlrv~~Dr~~f~~c~~~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG-~a~avf~~C~i~ 391 (539)
T PLN02995 331 QAVALRSSSDLSIFYKCSIEGYQD------TLMVHSQRQFYRECYIYGTVDFIFG-NAAAVFQNCIIL 391 (539)
T ss_pred ceEEEEEcCCceeEEcceEecccc------hhccCCCceEEEeeEEeeccceEec-ccceEEeccEEE
Confidence 345678889999999999985432 3555666777777777777777765 355666666664
No 60
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=94.61 E-value=0.1 Score=42.90 Aligned_cols=104 Identities=23% Similarity=0.264 Sum_probs=61.2
Q ss_pred CCeEe--eeEEEcCCCCcEEEecCCCCCeEEEcCCCCCccccceEEeecCcEEEEEeEEEec---C-----CC----CCc
Q 044741 76 PGIYR--EKIIVPANKPFITISGTKASRTKITWSDGGSILDSATLTVLASHFVARSLTIQNT---Y-----GS----YGK 141 (196)
Q Consensus 76 ~G~Y~--E~v~I~~~k~~itl~G~~~~~t~I~~~~~~~t~~sat~~v~a~~~~~~nlti~Ns---~-----g~----~~q 141 (196)
.|+.. +++.+. .+.||+|.+.+.. |... +-.+.-.++++.++||+|++- . +. ...
T Consensus 8 ~g~i~~~~~i~v~---snkTi~G~g~~~~-i~~~-------G~~i~~~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~~D 76 (200)
T PF00544_consen 8 SGTIDLKSPISVG---SNKTIIGIGAGAT-IIGG-------GLRIIKGASNVIIRNLRFRNVPVDPGPDWSGDGDSSDGD 76 (200)
T ss_dssp HHCCHHHCEEEEE---SSEEEEEETTTTE-EESS-------EEEEEESCEEEEEES-EEECEEEECSTEEETTEEECS--
T ss_pred EeEEccCCeEEEC---CCcEEEEccCCeE-EECc-------eEEEecCCCeEEEECCEEEeccccCCcccCCCccccCCC
Confidence 45554 567764 4579999876544 4332 122222579999999999982 1 11 223
Q ss_pred eEEEEEeCCcEEEEccEEeec--------eeEEEeC-CC--ceeEecCEEEcc-ceeEecCc
Q 044741 142 AVALRVSADRAAFYGCRILSY--------QHTLLDD-TG--NHYYSKCYIEGA-TDFISGNA 191 (196)
Q Consensus 142 a~Al~v~~d~~~~~~c~~~g~--------QDTl~~~-~g--r~~f~~c~I~G~-vDfIfG~g 191 (196)
++.+. .+.++-+.+|.|... .|.+..- .+ ..-+.+|++.+. --..+|..
T Consensus 77 ai~i~-~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~vTiS~n~f~~~~k~~l~G~~ 137 (200)
T PF00544_consen 77 AISID-NSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNVTISNNIFDNHNKTMLIGSS 137 (200)
T ss_dssp SEEEE-STEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEEEEES-EEEEEEETCEESSC
T ss_pred eEEEE-ecccEEEeccEEeccccccccccCCceEEEEeCCceEEEEchhccccccccccCCC
Confidence 44444 567899999999988 8887652 23 336677777754 22345553
No 61
>PLN02634 probable pectinesterase
Probab=94.47 E-value=0.16 Score=45.56 Aligned_cols=61 Identities=15% Similarity=0.232 Sum_probs=49.1
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
...+.+.+|...+++..|...- + .|+.+..|.-|++|.|+|.=|-+|- .|+.+|++|.|.-
T Consensus 174 AVAl~v~gDra~f~~C~f~G~Q-D-----TL~~~~gR~yf~~CyIeG~VDFIFG-~g~a~Fe~C~I~s 234 (359)
T PLN02634 174 AVAFRISGDKAFFFGCGFYGAQ-D-----TLCDDAGRHYFKECYIEGSIDFIFG-NGRSMYKDCELHS 234 (359)
T ss_pred eEEEEecCCcEEEEEeEEeccc-c-----eeeeCCCCEEEEeeEEcccccEEcC-CceEEEeccEEEE
Confidence 4568888999999999999422 2 3667788999999999999999985 4888888888874
No 62
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=94.47 E-value=0.26 Score=46.44 Aligned_cols=63 Identities=13% Similarity=0.194 Sum_probs=47.9
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEcc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGA 183 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~ 183 (196)
....+.+.+|...++|..|...-+ .|+.++.|.-|++|.|+|.=|=+|. +|+.+|++|.|.-.
T Consensus 332 QAVALrv~gDr~~fy~C~f~GyQD------TLy~~~~Rqyy~~C~I~GtVDFIFG-~a~avFq~C~I~~~ 394 (529)
T PLN02170 332 QAVALRVGSDKSVVYRCSVEGYQD------SLYTHSKRQFYRETDITGTVDFIFG-NSAVVFQSCNIAAR 394 (529)
T ss_pred ceEEEEecCCcEEEEeeeEeccCC------cceeCCCCEEEEeeEEccccceecc-cceEEEeccEEEEe
Confidence 445688899999999999984432 3666777888888888888888876 37778888877643
No 63
>PLN02916 pectinesterase family protein
Probab=94.44 E-value=0.33 Score=45.47 Aligned_cols=61 Identities=16% Similarity=0.211 Sum_probs=44.5
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
..-.+.+.+|...+++..|...-. .|+.++.|.-|++|.|+|.=|=+|- +++.+|++|.|.
T Consensus 296 QAVALrv~~D~a~fy~C~f~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG-~a~avFq~C~I~ 356 (502)
T PLN02916 296 QAVALRVSSDLSVFYRCSFKGYQD------TLFVHSLRQFYRDCHIYGTIDFIFG-DAAVVFQNCDIF 356 (502)
T ss_pred ceEEEEEcCCcEEEEeeeEeccCc------eeEeCCCCEEEEecEEecccceecc-CceEEEecCEEE
Confidence 345688889999999999984432 3666677778888888888777765 366667777664
No 64
>PLN02176 putative pectinesterase
Probab=94.42 E-value=0.17 Score=45.08 Aligned_cols=61 Identities=10% Similarity=0.174 Sum_probs=49.1
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
.-.+.+.+|...++|..|...- + .|+....|.-|++|.|+|.=|-+|- .|+.+|++|.|.-
T Consensus 148 AVAl~v~gDr~~f~~C~f~G~Q-D-----TLy~~~gRqyf~~CyIeG~VDFIFG-~a~a~Fe~C~I~s 208 (340)
T PLN02176 148 AVAARMLGDKYAIIDSSFDGFQ-D-----TLFDGKGRHYYKRCVISGGIDFIFG-YAQSIFEGCTLKL 208 (340)
T ss_pred eEEEEecCccEEEEccEEeccc-c-----eeEeCCcCEEEEecEEEecccEEec-CceEEEeccEEEE
Confidence 3457888999999999999422 2 3667788999999999999999985 4888999999873
No 65
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=94.38 E-value=0.24 Score=46.77 Aligned_cols=62 Identities=15% Similarity=0.217 Sum_probs=46.6
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
..-.+.+.+|...++|..|...-+ .|+.++.|..|++|.|+|.=|=+|.+ |..+|++|.|.-
T Consensus 338 QAVAl~v~~D~~~fy~C~~~G~QD------TLy~~~~rqyy~~C~I~GtVDFIFG~-a~avfq~C~i~~ 399 (537)
T PLN02506 338 QAVALRVDSDQSAFYRCSMEGYQD------TLYAHSLRQFYRECEIYGTIDFIFGN-GAAVLQNCKIYT 399 (537)
T ss_pred ceEEEEecCCcEEEEcceeecccc------cceecCCceEEEeeEEecccceEccC-ceeEEeccEEEE
Confidence 445688899999999999984332 36667778888888888888887764 777777777753
No 66
>PLN02304 probable pectinesterase
Probab=94.36 E-value=0.34 Score=43.83 Aligned_cols=61 Identities=13% Similarity=0.237 Sum_probs=47.9
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
.-.+.+.+|...+++..|...-. .|+....|.-|++|.|+|.=|-+|-. |+.+|++|.|.-
T Consensus 187 AVAL~v~gDra~fy~C~f~G~QD------TLy~~~gR~Yf~~CyIeG~VDFIFG~-g~A~Fe~C~I~s 247 (379)
T PLN02304 187 AVAIRIAGDQAAFWGCGFFGAQD------TLHDDRGRHYFKDCYIQGSIDFIFGD-ARSLYENCRLIS 247 (379)
T ss_pred EEEEEecCCcEEEEeceEecccc------eeEeCCCCEEEEeeEEcccccEEecc-ceEEEEccEEEE
Confidence 34578889999999999984332 36677788889999999988888774 888888888863
No 67
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=94.36 E-value=0.28 Score=46.63 Aligned_cols=59 Identities=14% Similarity=0.181 Sum_probs=41.5
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEE
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYI 180 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I 180 (196)
...+.+.+|...+++..|...-+ .|+.++.|.-|++|.|+|.=|-+|. +++.+|++|.|
T Consensus 360 AVAlrv~~D~~~fy~C~~~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG-~a~avfq~C~i 418 (566)
T PLN02713 360 AVALRSGADLSTFYSCSFEAYQD------TLYTHSLRQFYRECDIYGTVDFIFG-NAAVVFQNCNL 418 (566)
T ss_pred eEEEEecCCcEEEEeeeeccCCc------ceEECCCCEEEEeeEEecccceecc-cceEEEeccEE
Confidence 34578889999999999984432 3666667777777777777777765 35556666665
No 68
>PLN02497 probable pectinesterase
Probab=94.36 E-value=0.19 Score=44.74 Aligned_cols=60 Identities=18% Similarity=0.257 Sum_probs=48.6
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
.-.+.+.+|...++|..|...-+ .|+.+..|..|++|.|+|.=|-+|- .|+.+|++|.|.
T Consensus 142 AVAl~v~gDr~~fy~C~f~G~QD------TLy~~~gRqyf~~C~IeG~VDFIFG-~g~a~Fe~C~I~ 201 (331)
T PLN02497 142 AVAAMIGGDKSAFYSCGFAGVQD------TLWDSDGRHYFKRCTIQGAVDFIFG-SGQSIYESCVIQ 201 (331)
T ss_pred eEEEEecCCcEEEEeeEEecccc------ceeeCCCcEEEEeCEEEecccEEcc-CceEEEEccEEE
Confidence 34577889999999999984322 3667778899999999999999987 488899999987
No 69
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=94.32 E-value=0.26 Score=47.67 Aligned_cols=61 Identities=13% Similarity=0.259 Sum_probs=39.5
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
..-.+.+.+|...++|..|...-+ .|+.++.|.-|++|.|+|.=|=+|. +++.+|++|.|.
T Consensus 356 QAVAlrv~~Dra~fy~C~f~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG-~a~avfq~C~I~ 416 (670)
T PLN02217 356 QAVAIRVLSDESIFYNCKFDGYQD------TLYAHSHRQFYRDCTISGTIDFLFG-DAAAVFQNCTLL 416 (670)
T ss_pred ceEEEEecCCcEEEEcceeeeccc------hhccCCCcEEEEeCEEEEeccEEec-CceEEEEccEEE
Confidence 345688889999999999984332 2555556666666666666666653 355555555554
No 70
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=94.30 E-value=0.25 Score=46.97 Aligned_cols=61 Identities=20% Similarity=0.250 Sum_probs=42.4
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
....+.+.+|...++|..|...-+ .|+.++.|.-|++|.|+|.=|=+|. +++.+|++|.|.
T Consensus 366 QAVAlrv~~D~~~f~~c~~~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG-~a~avf~~C~i~ 426 (572)
T PLN02990 366 QAVALRVSADYAVFYNCQIDGYQD------TLYVHSHRQFFRDCTVSGTVDFIFG-DAKVVLQNCNIV 426 (572)
T ss_pred ceEEEEEcCCcEEEEeeeEecccc------hhccCCCcEEEEeeEEecccceEcc-CceEEEEccEEE
Confidence 345688889999999999984332 3555566777777777777777664 366666666664
No 71
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=94.18 E-value=0.82 Score=40.16 Aligned_cols=65 Identities=9% Similarity=0.029 Sum_probs=38.0
Q ss_pred eecCcEEEEEeEEEecCCC--CCceEEEEE-eCCcEEEEccEEeecee-EEEeCCCce-eEecCEEEccc
Q 044741 120 VLASHFVARSLTIQNTYGS--YGKAVALRV-SADRAAFYGCRILSYQH-TLLDDTGNH-YYSKCYIEGAT 184 (196)
Q Consensus 120 v~a~~~~~~nlti~Ns~g~--~~qa~Al~v-~~d~~~~~~c~~~g~QD-Tl~~~~gr~-~f~~c~I~G~v 184 (196)
..++++++++++++..... ....-+++. .++++.+++|.+.|..| .+|.+..+. .+++|+++++.
T Consensus 83 ~~s~~i~I~n~~i~~~~~~~~~~~~~GI~~~~s~~v~I~~n~i~g~~d~GIyv~~s~~~~v~nN~~~~n~ 152 (314)
T TIGR03805 83 KGSDGIIIRRLRVEWTGGPKSSNGAYGIYPVESTNVLVEDSYVRGASDAGIYVGQSQNIVVRNNVAEENV 152 (314)
T ss_pred eCCCCEEEEeeEEEeccCccccCCcceEEEeccCCEEEECCEEECCCcccEEECCCCCeEEECCEEccCc
Confidence 3467788888877644321 112334444 46777777777777665 576654433 56666665543
No 72
>PLN02314 pectinesterase
Probab=94.11 E-value=0.34 Score=46.19 Aligned_cols=61 Identities=11% Similarity=0.213 Sum_probs=44.4
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
....+.+.+|...++|..|...-+ .|+.++.|.-|++|.|+|.=|=+|. +++.+|++|.|.
T Consensus 384 QAvAlrv~~D~~~f~~c~~~G~QD------TLy~~~~rq~y~~C~I~GtvDFIFG-~a~avf~~c~i~ 444 (586)
T PLN02314 384 QAVAFRSGSDMSVFYQCSFDAFQD------TLYAHSNRQFYRDCDITGTIDFIFG-NAAVVFQNCNIQ 444 (586)
T ss_pred ceEEEEecCCcEEEEeeEEEeccc------hheeCCCCEEEEeeEEEeccceecc-CceeeeeccEEE
Confidence 345688889999999999984432 3666677777888888887777765 366677777664
No 73
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=94.02 E-value=0.32 Score=46.43 Aligned_cols=61 Identities=23% Similarity=0.297 Sum_probs=40.1
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
....+.+.+|...++|..|...-+ .|+.+..|--|++|.|+|.=|=+|.+ ++.+|++|.|.
T Consensus 379 QAvAlrv~~D~~~fy~C~~~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~C~i~ 439 (587)
T PLN02484 379 QAVALRVGADHAVVYRCNIIGYQD------TLYVHSNRQFFRECDIYGTVDFIFGN-AAVVLQNCSIY 439 (587)
T ss_pred ceEEEEecCCcEEEEeeeEeccCc------ccccCCCcEEEEecEEEeccceeccc-ceeEEeccEEE
Confidence 445688899999999999985432 35555666666666666666666542 55555555553
No 74
>PLN02432 putative pectinesterase
Probab=94.02 E-value=0.24 Score=43.34 Aligned_cols=61 Identities=15% Similarity=0.214 Sum_probs=50.0
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
....|.+.++...++|..|...- + .|+.+..+.-|++|.|+|.=|=+|- .|+.+|++|.|.
T Consensus 112 QAvAl~v~gDr~~f~~c~~~G~Q-D-----TLy~~~gr~yf~~c~I~G~VDFIFG-~g~a~Fe~c~i~ 172 (293)
T PLN02432 112 KAVALRVAGDRAAFYGCRILSYQ-D-----TLLDDTGRHYYRNCYIEGATDFICG-NAASLFEKCHLH 172 (293)
T ss_pred ceEEEEEcCCcEEEEcceEeccc-c-----eeEECCCCEEEEeCEEEecccEEec-CceEEEEeeEEE
Confidence 44568888999999999998332 2 4667788999999999999999986 588999999996
No 75
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=93.97 E-value=0.37 Score=45.59 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=39.9
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYI 180 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I 180 (196)
....+.+.+|...++|..|...-+ .|+.++.|.-|++|.|+|.=|=+|.+ |..+|++|.|
T Consensus 342 QAVAlrv~~D~~~fy~C~~~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~c~i 401 (548)
T PLN02301 342 QAVALRVSADQAVINRCRIDAYQD------TLYAHSLRQFYRDSYITGTVDFIFGN-AAVVFQNCKI 401 (548)
T ss_pred ceEEEEecCCcEEEEeeeeeeccc------cceecCCcEEEEeeEEEeccceeccc-ceeEEeccEE
Confidence 445688889999999999985432 35555666667777777766666542 4555555555
No 76
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=93.94 E-value=0.4 Score=45.83 Aligned_cols=60 Identities=12% Similarity=0.258 Sum_probs=36.2
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYI 180 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I 180 (196)
..-.+.+.+|...++|..|...-. .|+.+..|.-|++|.|+|.=|=+|. +|+.+|++|.|
T Consensus 391 QAVAl~v~~Dr~~f~~c~~~G~QD------TLy~~~~Rqyy~~C~I~GtVDFIFG-~a~avf~~C~i 450 (596)
T PLN02745 391 QAVAIRVQSDRSIFLNCRFEGYQD------TLYAQTHRQFYRSCVITGTIDFIFG-DAAAIFQNCLI 450 (596)
T ss_pred ceEEEEEcCCcEEEEeeEEeeccc------ccccCCCcEEEEeeEEEeeccEEec-ceeEEEEecEE
Confidence 345688889999999999985432 2444455555555555555554443 24444444444
No 77
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=93.81 E-value=0.38 Score=45.72 Aligned_cols=61 Identities=18% Similarity=0.241 Sum_probs=41.1
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
....+.+.+|...++|..|...-. .|+.++.|.-|++|.|+|.=|=+|.+ +..+|.+|.|.
T Consensus 364 QAVAl~v~~D~~~fy~c~~~G~QD------TLy~~~~rq~y~~C~I~GtvDFIFG~-a~avfq~c~i~ 424 (565)
T PLN02468 364 QAVALMSSADLSVFYRCTMDAFQD------TLYAHAQRQFYRECNIYGTVDFIFGN-SAVVFQNCNIL 424 (565)
T ss_pred ceEEEEEcCCcEEEEEeEEEeccc------hhccCCCceEEEeeEEecccceeecc-ceEEEeccEEE
Confidence 345688899999999999985432 25555566666777777766666553 55566666553
No 78
>PLN02197 pectinesterase
Probab=93.76 E-value=0.45 Score=45.40 Aligned_cols=60 Identities=10% Similarity=0.095 Sum_probs=39.1
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYI 180 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I 180 (196)
..-.+.+.+|...+++..|...-+ .|+.+..|.-|++|.|+|.=|=+|-+ +..+|.+|.|
T Consensus 383 QAVAlrv~~D~~~fy~C~f~GyQD------TLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~C~i 442 (588)
T PLN02197 383 QAVAIRVNGDRAVIFNCRFDGYQD------TLYVNNGRQFYRNIVVSGTVDFIFGK-SATVIQNSLI 442 (588)
T ss_pred ceEEEEecCCcEEEEEeEEEecCc------ceEecCCCEEEEeeEEEecccccccc-eeeeeecCEE
Confidence 345688889999999999985432 35555666666666666666665542 4445555544
No 79
>PLN02682 pectinesterase family protein
Probab=93.71 E-value=0.24 Score=44.61 Aligned_cols=60 Identities=17% Similarity=0.235 Sum_probs=47.2
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
...+.+.+|...++|..|...-+ .|+.+..|.-|++|.|+|.=|=+|-. |+.+|++|.|.
T Consensus 188 AVAL~v~gDr~~fy~C~f~G~QD------TLy~~~gRqyf~~C~IeG~VDFIFG~-g~a~Fe~C~I~ 247 (369)
T PLN02682 188 AVALRISADTAAFYGCKFLGAQD------TLYDHLGRHYFKDCYIEGSVDFIFGN-GLSLYEGCHLH 247 (369)
T ss_pred EEEEEecCCcEEEEcceEecccc------ceEECCCCEEEEeeEEcccccEEecC-ceEEEEccEEE
Confidence 34578889999999999984432 36667788889999999988888774 77888888885
No 80
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=93.70 E-value=0.38 Score=45.01 Aligned_cols=60 Identities=18% Similarity=0.329 Sum_probs=40.4
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
...+.+.+|...+++..|...-. .|+.+..|..|++|.|+|.=|=+|. ++..+|++|.|.
T Consensus 290 AvAl~v~~D~~~fy~c~~~G~QD------TLy~~~~rqyy~~C~I~G~vDFIFG-~a~avf~~C~i~ 349 (497)
T PLN02698 290 AIALSITSDHSVLYRCSIAGYQD------TLYAAALRQFYRECDIYGTIDFIFG-NAAAVFQNCYLF 349 (497)
T ss_pred eEEEEecCCcEEEEcceeecccc------hheeCCCcEEEEeeEEEeccceEec-ccceeecccEEE
Confidence 45688889999999999983322 3555556666777777776666664 355666666664
No 81
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=93.65 E-value=0.39 Score=45.82 Aligned_cols=60 Identities=17% Similarity=0.215 Sum_probs=37.0
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYI 180 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I 180 (196)
....+.+.+|...++|..|...-+ .|+.++.|.-|++|.|+|.=|=+|. ++..+|.+|.|
T Consensus 381 QAvAlrv~~D~~~fy~C~~~g~QD------TLy~~~~rq~y~~c~I~GtvDFIFG-~a~avfq~c~i 440 (587)
T PLN02313 381 QAVALRVGSDFSAFYQCDMFAYQD------TLYVHSNRQFFVKCHITGTVDFIFG-NAAAVLQDCDI 440 (587)
T ss_pred ceEEEEecCCcEEEEeeeEecccc------hhccCCCcEEEEeeEEeeccceecc-ceeEEEEccEE
Confidence 345688899999999999984332 2445555555666666665555543 24444444444
No 82
>PLN02665 pectinesterase family protein
Probab=93.55 E-value=0.24 Score=44.66 Aligned_cols=62 Identities=11% Similarity=0.142 Sum_probs=46.8
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
....+.+.+|...++|..|...- + .|+.+..|.-|++|.|+|.=|=+|- .|+.+|++|.|.=
T Consensus 178 QAVAl~v~gDka~f~~C~f~G~Q-D-----TL~~~~gr~yf~~CyIeG~VDFIFG-~g~a~fe~C~i~s 239 (366)
T PLN02665 178 QAVAMRISGDKAAFYNCRFIGFQ-D-----TLCDDKGRHFFKDCYIEGTVDFIFG-SGKSLYLNTELHV 239 (366)
T ss_pred ceEEEEEcCCcEEEEcceecccc-c-----eeEeCCCCEEEEeeEEeeccceecc-ccceeeEccEEEE
Confidence 34568888999999999998332 1 3666677888888888888888875 4777888887763
No 83
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=93.51 E-value=0.55 Score=44.01 Aligned_cols=60 Identities=20% Similarity=0.207 Sum_probs=42.2
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
.-.+.+.+|...+++..|...-+ .|+.++.|.-|++|.|+|.=|=+|. ++..+|.+|.|.
T Consensus 304 AVALrv~~Dra~Fy~C~f~GyQD------TLy~~~~RqyyrdC~I~GtVDFIFG-~a~avFq~C~I~ 363 (509)
T PLN02488 304 AVALRVSGDMSVIYRCRIEGYQD------ALYPHRDRQFYRECFITGTVDFICG-NAAAVFQFCQIV 363 (509)
T ss_pred eEEEEecCCcEEEEcceeeccCc------ceeeCCCCEEEEeeEEeeccceEec-ceEEEEEccEEE
Confidence 44578889999999999984332 3566667777777777777777764 366666666664
No 84
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=93.51 E-value=0.52 Score=44.54 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=30.1
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLL 167 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~ 167 (196)
....+.+.+|...+++..|...-+ .|+.++.|.-|++|.|+|.=|=+|
T Consensus 332 QAvAlrv~~D~~~f~~C~~~gyQD------TLy~~~~rq~y~~c~I~GtVDFIF 379 (538)
T PLN03043 332 QAVALRNNADLSTFYRCSFEGYQD------TLYVHSLRQFYRECDIYGTVDFIF 379 (538)
T ss_pred ceEEEEEcCCcEEEEeeEEeccCc------ccccCCCcEEEEeeEEeeccceEe
Confidence 344588889999999999985432 244444455555555555544444
No 85
>KOG1777 consensus Putative Zn-finger protein [General function prediction only]
Probab=93.37 E-value=1.6 Score=40.44 Aligned_cols=54 Identities=22% Similarity=0.272 Sum_probs=40.9
Q ss_pred CCcchHHHHHHhCCCCCCceEEEEEcCCeEe-eeEEEcCCCCcEEEecCCCC----CeEEEcC
Q 044741 50 GDFRTIQEAIDSVPDNNSELVFISVAPGIYR-EKIIVPANKPFITISGTKAS----RTKITWS 107 (196)
Q Consensus 50 g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~-E~v~I~~~k~~itl~G~~~~----~t~I~~~ 107 (196)
..|..|.+|+..+...+. ...|++..|+|+ |.+.|+. .|.|+|.++. .|++++.
T Consensus 30 ~~fD~iEea~~~l~e~~~-e~LIFlH~G~~e~~~i~I~s---dvqiiGAs~~dia~sVvle~~ 88 (625)
T KOG1777|consen 30 QCFDHIEEALRFLDENDE-EKLIFLHEGTHETETIRITS---DVQIIGASPSDIATSVVLEGR 88 (625)
T ss_pred HhhhhHHHHhhhcccccc-cceEEEEeccccceEEEEcC---CeeEeccCCccceeeEEEecc
Confidence 458899999998876543 347999999998 8899843 4999998753 4566654
No 86
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=92.87 E-value=3.2 Score=34.23 Aligned_cols=40 Identities=8% Similarity=0.045 Sum_probs=22.7
Q ss_pred EEEE-eCCcEEEEccEEeeceeEEEeCC-CceeEecCEEEcc
Q 044741 144 ALRV-SADRAAFYGCRILSYQHTLLDDT-GNHYYSKCYIEGA 183 (196)
Q Consensus 144 Al~v-~~d~~~~~~c~~~g~QDTl~~~~-gr~~f~~c~I~G~ 183 (196)
++.+ .++...+.++.|......+++.. .+..+.++.|+++
T Consensus 103 GI~l~~s~~~~I~~N~i~~~~~GI~l~~s~~n~I~~N~i~~n 144 (236)
T PF05048_consen 103 GIYLYGSSNNTISNNTISNNGYGIYLSSSSNNTITGNTISNN 144 (236)
T ss_pred eEEEeeCCceEEECcEEeCCCEEEEEEeCCCCEEECeEEeCC
Confidence 4444 34556666666666666666543 3445566666655
No 87
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=92.06 E-value=3.9 Score=37.87 Aligned_cols=65 Identities=11% Similarity=-0.011 Sum_probs=37.3
Q ss_pred CCCcEEEecCCCCCeEEEcCC-CCCccccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeec
Q 044741 88 NKPFITISGTKASRTKITWSD-GGSILDSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSY 162 (196)
Q Consensus 88 ~k~~itl~G~~~~~t~I~~~~-~~~t~~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~ 162 (196)
..++|+|.|. +|++.. ......+..+...+++++++|.+++|+.+ .++++++-+..+.++.+.|.
T Consensus 113 ~A~nVTIsGL-----tIdGsG~dl~~rdAgI~v~~a~~v~Iedn~L~gsg~-----FGI~L~~~~~~I~~N~I~g~ 178 (455)
T TIGR03808 113 GADGIGLSGL-----TLDGGGIPLPQRRGLIHCQGGRDVRITDCEITGSGG-----NGIWLETVSGDISGNTITQI 178 (455)
T ss_pred cCCCeEEEee-----EEEeCCCcccCCCCEEEEccCCceEEEeeEEEcCCc-----ceEEEEcCcceEecceEecc
Confidence 4456666654 244332 11223344555668999999999999842 24555443355555555555
No 88
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=91.66 E-value=0.59 Score=44.19 Aligned_cols=58 Identities=17% Similarity=0.306 Sum_probs=38.2
Q ss_pred cCcEEEEEeEEEecCCCCCceEEEEEeC-CcEEEEccEEeeceeEEEeCCC------------c-eeEecCEEE
Q 044741 122 ASHFVARSLTIQNTYGSYGKAVALRVSA-DRAAFYGCRILSYQHTLLDDTG------------N-HYYSKCYIE 181 (196)
Q Consensus 122 a~~~~~~nlti~Ns~g~~~qa~Al~v~~-d~~~~~~c~~~g~QDTl~~~~g------------r-~~f~~c~I~ 181 (196)
.++.+++||+|+|.... ..-++..++ .++.+.+|+|...+|.++...| | .++++|+..
T Consensus 269 ~~nl~~~nl~I~~~~~~--NtDG~d~~sc~NvlI~~~~fdtgDD~I~iksg~~~~~~~~~~~~~~i~i~~c~~~ 340 (542)
T COG5434 269 CDNLTFRNLTIDANRFD--NTDGFDPGSCSNVLIEGCRFDTGDDCIAIKSGAGLDGKKGYGPSRNIVIRNCYFS 340 (542)
T ss_pred ccCceecceEEECCCCC--CCCccccccceeEEEeccEEecCCceEEeecccCCcccccccccccEEEecceec
Confidence 44555555555554432 333455533 5789999999999999987432 2 488999876
No 89
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=91.02 E-value=1 Score=41.34 Aligned_cols=61 Identities=10% Similarity=0.061 Sum_probs=45.8
Q ss_pred cceEEeecCcEEEEEeEEEecCCCCCceEEEEE------------eCCcEEEEccEEeeceeEEEeCCCceeEecCEEEc
Q 044741 115 SATLTVLASHFVARSLTIQNTYGSYGKAVALRV------------SADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEG 182 (196)
Q Consensus 115 sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v------------~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G 182 (196)
.-.|.+.+|...+++..|...-. .|+. ...|.-|++|.|+|.=|=+|- .|+.+|++|.|.-
T Consensus 230 AVALrv~GDra~fy~C~flG~QD------TLy~~~~~~~~~~~~~~~gRqYf~~CyIeG~VDFIFG-~g~AvFenC~I~s 302 (422)
T PRK10531 230 AVALRTDGDKVQIENVNILGRQD------TFFVTNSGVQNRLETDRQPRTYVKNSYIEGDVDFVFG-RGAVVFDNTEFRV 302 (422)
T ss_pred eEEEEEcCCcEEEEeeEEecccc------eeeeccccccccccccccccEEEEeCEEeecccEEcc-CceEEEEcCEEEE
Confidence 34578889999999999984322 2333 234788999999999998886 4788888888864
No 90
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=89.90 E-value=0.65 Score=34.79 Aligned_cols=63 Identities=21% Similarity=0.184 Sum_probs=37.9
Q ss_pred eEEee-cCcEEEEEeEEEecCCCCCceEEEEEe-CCcEEEEccEEeeceeEEEeC-CCceeEecCEEEccce
Q 044741 117 TLTVL-ASHFVARSLTIQNTYGSYGKAVALRVS-ADRAAFYGCRILSYQHTLLDD-TGNHYYSKCYIEGATD 185 (196)
Q Consensus 117 t~~v~-a~~~~~~nlti~Ns~g~~~qa~Al~v~-~d~~~~~~c~~~g~QDTl~~~-~gr~~f~~c~I~G~vD 185 (196)
.+.+. .+.++++|-+|.+ .+ .++++. +.+..+.+|.|.+....++.. ..+..+++|.|.+..+
T Consensus 25 gi~~~~~~~~~i~n~~i~~-~~-----~gi~~~~~~~~~i~~~~~~~~~~~i~~~~~~~~~i~~~~i~~~~~ 90 (158)
T PF13229_consen 25 GIHVSGSSNITIENCTISN-GG-----YGIYVSGGSNVTISNNTISDNGSGIYVSGSSNITIENNRIENNGD 90 (158)
T ss_dssp CEEE-SSCESEEES-EEES-ST-----TSEEEECCES-EEES-EEES-SEEEECCS-CS-EEES-EEECSSS
T ss_pred EEEEEcCCCeEEECeEEEC-CC-----cEEEEecCCCeEEECeEEEEccceEEEEecCCceecCcEEEcCCC
Confidence 34444 4456888888887 21 235553 378889999999888777665 3456899999998876
No 91
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=87.06 E-value=6.2 Score=34.12 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=30.7
Q ss_pred EeCCcEEEEccEEeeceeEEEeCCCceeEecCEEEccceeEecC
Q 044741 147 VSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGN 190 (196)
Q Consensus 147 v~~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~G~vDfIfG~ 190 (196)
=.+.++.|.||+|.|-|-==|.++ .-.+||... ++|.-|=+
T Consensus 191 W~SkNltliNC~I~g~QpLCY~~~--L~l~nC~~~-~tdlaFEy 231 (277)
T PF12541_consen 191 WNSKNLTLINCTIEGTQPLCYCDN--LVLENCTMI-DTDLAFEY 231 (277)
T ss_pred EEcCCeEEEEeEEeccCccEeecc--eEEeCcEee-cceeeeee
Confidence 467899999999999997667653 235788877 77776654
No 92
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=82.42 E-value=2.2 Score=40.42 Aligned_cols=63 Identities=17% Similarity=0.199 Sum_probs=40.2
Q ss_pred cCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeecee----EEEeCCCc-eeEecCEEEccceeEe
Q 044741 122 ASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQH----TLLDDTGN-HYYSKCYIEGATDFIS 188 (196)
Q Consensus 122 a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QD----Tl~~~~gr-~~f~~c~I~G~vDfIf 188 (196)
..++.++|++|.|+.- +.+ ..+..+...|.|-.+..+.+ .|=.+..+ ....+|+|.=.=|-|+
T Consensus 246 c~NV~~~g~~i~ns~~---~~~-h~~~~~nl~~~nl~I~~~~~~NtDG~d~~sc~NvlI~~~~fdtgDD~I~ 313 (542)
T COG5434 246 CRNVLLEGLNIKNSPL---WTV-HPVDCDNLTFRNLTIDANRFDNTDGFDPGSCSNVLIEGCRFDTGDDCIA 313 (542)
T ss_pred cceEEEeeeEecCCCc---EEE-eeecccCceecceEEECCCCCCCCccccccceeEEEeccEEecCCceEE
Confidence 3578888888887752 111 23467777788877777665 55444443 4788888876555554
No 93
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=78.15 E-value=5.6 Score=34.94 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=17.9
Q ss_pred CcEEEEccEEeeceeEEEeCCCc--eeEecCEEE
Q 044741 150 DRAAFYGCRILSYQHTLLDDTGN--HYYSKCYIE 181 (196)
Q Consensus 150 d~~~~~~c~~~g~QDTl~~~~gr--~~f~~c~I~ 181 (196)
+++.++||.+...-|.+-...++ ..+++|+..
T Consensus 151 ~nv~I~n~~i~~gDD~Iaiks~~~ni~v~n~~~~ 184 (326)
T PF00295_consen 151 KNVTIENCFIDNGDDCIAIKSGSGNILVENCTCS 184 (326)
T ss_dssp EEEEEESEEEESSSESEEESSEECEEEEESEEEE
T ss_pred eEEEEEEeecccccCcccccccccceEEEeEEEe
Confidence 45666666666666666554443 255555544
No 94
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]
Probab=77.76 E-value=11 Score=33.73 Aligned_cols=64 Identities=16% Similarity=0.265 Sum_probs=44.4
Q ss_pred eEEeecCcEEEEEeEEEecCCC-----CCceEEEEEe-CCcEEEEccEEeeceeEEEeCCCceeEecCEEE
Q 044741 117 TLTVLASHFVARSLTIQNTYGS-----YGKAVALRVS-ADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 117 t~~v~a~~~~~~nlti~Ns~g~-----~~qa~Al~v~-~d~~~~~~c~~~g~QDTl~~~~gr~~f~~c~I~ 181 (196)
.+...+|..+++|+.+...-.. .+.---+... .-|..|.||-|+|.-|=++. .|...|.+|.|.
T Consensus 215 aL~~dgDka~frnv~llg~QdTlFv~~~~~~~~~~tn~~~R~yftNsyI~GdvDfIfG-sgtaVFd~c~i~ 284 (405)
T COG4677 215 ALATDGDKAIFRNVNLLGNQDTLFVGNSGVQNRLETNRQPRTYFTNSYIEGDVDFIFG-SGTAVFDNCEIQ 284 (405)
T ss_pred EEEecCCceeeeeeeEeeccceEEecCCCCccccccCcchhhheecceecccceEEec-cceEEeccceEE
Confidence 3556789999999998854321 1111111122 23789999999999998865 688899999986
No 95
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=77.49 E-value=9.6 Score=28.24 Aligned_cols=63 Identities=14% Similarity=0.066 Sum_probs=38.8
Q ss_pred ceEEeec-CcEEEEEeEEEecCCCCCceEEEEE-eCCcEEEEccEEeecee-EEEeCC--CceeEecCEEEccc
Q 044741 116 ATLTVLA-SHFVARSLTIQNTYGSYGKAVALRV-SADRAAFYGCRILSYQH-TLLDDT--GNHYYSKCYIEGAT 184 (196)
Q Consensus 116 at~~v~a-~~~~~~nlti~Ns~g~~~qa~Al~v-~~d~~~~~~c~~~g~QD-Tl~~~~--gr~~f~~c~I~G~v 184 (196)
.-+.+.. .++.+++.+|++.. .++.+ .+.+..+++|+|....+ .++... ...-+++|.+..+-
T Consensus 46 ~gi~~~~~~~~~i~~~~~~~~~------~~i~~~~~~~~~i~~~~i~~~~~~gi~~~~~~~~~~i~~n~~~~~~ 113 (158)
T PF13229_consen 46 YGIYVSGGSNVTISNNTISDNG------SGIYVSGSSNITIENNRIENNGDYGIYISNSSSNVTIENNTIHNNG 113 (158)
T ss_dssp TSEEEECCES-EEES-EEES-S------EEEECCS-CS-EEES-EEECSSS-SCE-TCEECS-EEES-EEECCT
T ss_pred cEEEEecCCCeEEECeEEEEcc------ceEEEEecCCceecCcEEEcCCCccEEEeccCCCEEEEeEEEEeCc
Confidence 3344443 67888888887654 34444 68999999999999977 888763 34588999998765
No 96
>PHA00407 phage lambda Rz1-like protein
Probab=74.93 E-value=3.4 Score=29.03 Aligned_cols=37 Identities=8% Similarity=0.116 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHHHHHhhccCCCCCCCCCCCCcEEEEEcCC
Q 044741 8 VSILFVASTIVFASITATCGSTATIPKDFSTAVLIRVEKY 47 (196)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~V~~~ 47 (196)
.|--++-+|+++...+++|.+- +.+|.....++||++
T Consensus 31 wkaaLIGlllicv~tISGCaSe---s~lp~ep~k~TVDaS 67 (84)
T PHA00407 31 WKAALIGLLLICVATISGCASE---SNLPVEPQKVTVDAS 67 (84)
T ss_pred HHHHHHHHHHHHHHHHhhhhhc---ccCCCCcccceeeee
Confidence 3555666777888899999875 455555666777764
No 97
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=74.48 E-value=20 Score=32.79 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=41.1
Q ss_pred ecCcEEEEEeEEEe------cCCC-----------------CCceEEEEEeCCcEEEEccEEeeceeEEEeCC-------
Q 044741 121 LASHFVARSLTIQN------TYGS-----------------YGKAVALRVSADRAAFYGCRILSYQHTLLDDT------- 170 (196)
Q Consensus 121 ~a~~~~~~nlti~N------s~g~-----------------~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~------- 170 (196)
..++++++||+|.| +.|- ...++|++-..+++.++||...+. -.+-...
T Consensus 185 ~~~~v~i~~v~I~~~~~spNtDGidi~~s~nV~I~n~~I~~GDDcIaiksg~~nI~I~n~~c~~g-hGisiGSlG~~~~~ 263 (404)
T PLN02188 185 ECRNFKGSGLKISAPSDSPNTDGIHIERSSGVYISDSRIGTGDDCISIGQGNSQVTITRIRCGPG-HGISVGSLGRYPNE 263 (404)
T ss_pred ccccEEEEEEEEeCCCCCCCCCcEeeeCcccEEEEeeEEeCCCcEEEEccCCccEEEEEEEEcCC-CcEEeCCCCCCCcC
Confidence 35789999999885 2220 114567666778999999888543 2343211
Q ss_pred ---CceeEecCEEEccc
Q 044741 171 ---GNHYYSKCYIEGAT 184 (196)
Q Consensus 171 ---gr~~f~~c~I~G~v 184 (196)
...+++||.+.++-
T Consensus 264 ~~V~nV~v~n~~~~~t~ 280 (404)
T PLN02188 264 GDVTGLVVRDCTFTGTT 280 (404)
T ss_pred CcEEEEEEEeeEEECCC
Confidence 23489999999874
No 98
>PLN02218 polygalacturonase ADPG
Probab=72.93 E-value=16 Score=33.62 Aligned_cols=63 Identities=8% Similarity=0.089 Sum_probs=40.3
Q ss_pred ecCcEEEEEeEEEe------cCCC----------------C-CceEEEEEeCCcEEEEccEEeeceeEEEeCC-C-----
Q 044741 121 LASHFVARSLTIQN------TYGS----------------Y-GKAVALRVSADRAAFYGCRILSYQHTLLDDT-G----- 171 (196)
Q Consensus 121 ~a~~~~~~nlti~N------s~g~----------------~-~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~-g----- 171 (196)
..++++++||+|.+ +.|- . -..+|+.-...++.++||.+.+.. .+-... |
T Consensus 222 ~~~nV~i~~v~I~a~~~spNTDGIdi~ss~nV~I~n~~I~tGDDcIaIksgs~nI~I~n~~c~~GH-GisIGS~g~~~~~ 300 (431)
T PLN02218 222 KCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGTGDDCISIESGSQNVQINDITCGPGH-GISIGSLGDDNSK 300 (431)
T ss_pred ceeeEEEEEEEEeCCCCCCCCCcEeecccceEEEEccEEecCCceEEecCCCceEEEEeEEEECCC-CEEECcCCCCCCC
Confidence 45789999999975 2220 1 145777767788999999985432 343211 1
Q ss_pred ----ceeEecCEEEccc
Q 044741 172 ----NHYYSKCYIEGAT 184 (196)
Q Consensus 172 ----r~~f~~c~I~G~v 184 (196)
..+++||.+.++.
T Consensus 301 ~~V~nV~v~n~~~~~t~ 317 (431)
T PLN02218 301 AFVSGVTVDGAKLSGTD 317 (431)
T ss_pred ceEEEEEEEccEEecCC
Confidence 3467788777754
No 99
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=70.70 E-value=40 Score=27.57 Aligned_cols=63 Identities=14% Similarity=-0.044 Sum_probs=37.8
Q ss_pred EEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCCc-eeEecCEEEccce
Q 044741 118 LTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTGN-HYYSKCYIEGATD 185 (196)
Q Consensus 118 ~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr-~~f~~c~I~G~vD 185 (196)
....+++.++++-++++.. .++.+.-.. +..++++.|.+.++.+++.... ..++++.|.++-.
T Consensus 61 ~~~~s~~~~i~~n~i~~n~----~Gi~l~~s~-~~~I~~N~i~~n~~GI~l~~s~~~~I~~N~i~~~~~ 124 (236)
T PF05048_consen 61 HLMGSSNNTIENNTISNNG----YGIYLMGSS-NNTISNNTISNNGYGIYLYGSSNNTISNNTISNNGY 124 (236)
T ss_pred EEEccCCCEEEeEEEEccC----CCEEEEcCC-CcEEECCEecCCCceEEEeeCCceEEECcEEeCCCE
Confidence 3334455677777776554 123333333 3489999999998888876543 2566666654433
No 100
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=69.11 E-value=13 Score=22.38 Aligned_cols=39 Identities=8% Similarity=-0.002 Sum_probs=27.1
Q ss_pred EEE-eCCcEEEEccEEeeceeEEEeCCC-ceeEecCEEEcc
Q 044741 145 LRV-SADRAAFYGCRILSYQHTLLDDTG-NHYYSKCYIEGA 183 (196)
Q Consensus 145 l~v-~~d~~~~~~c~~~g~QDTl~~~~g-r~~f~~c~I~G~ 183 (196)
+++ .+....++++.+.+..|.++.... +..++++.++++
T Consensus 2 I~l~~s~~~~i~~N~i~~~~~GI~~~~s~~n~i~~N~~~~n 42 (44)
T TIGR03804 2 IYLESSSNNTLENNTASNNSYGIYLTDSSNNTLSNNTASSN 42 (44)
T ss_pred EEEEecCCCEEECcEEeCCCCEEEEEeCCCCEeECCEEEcC
Confidence 344 456677999999999999988654 335556665544
No 101
>PLN03003 Probable polygalacturonase At3g15720
Probab=64.24 E-value=33 Score=31.93 Aligned_cols=63 Identities=14% Similarity=0.132 Sum_probs=40.8
Q ss_pred ecCcEEEEEeEEEec--C----CC-----------------CCceEEEEEeCCcEEEEccEEeeceeEEEeC--------
Q 044741 121 LASHFVARSLTIQNT--Y----GS-----------------YGKAVALRVSADRAAFYGCRILSYQHTLLDD-------- 169 (196)
Q Consensus 121 ~a~~~~~~nlti~Ns--~----g~-----------------~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~-------- 169 (196)
..++++++||+|.+. . |- ....+|+.-...++.++||...+.. .+-..
T Consensus 168 ~c~nV~i~~l~I~ap~~spNTDGIDi~~S~nV~I~n~~I~tGDDCIaiksgs~NI~I~n~~c~~GH-GISIGSlg~~g~~ 246 (456)
T PLN03003 168 ECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGH-GISIGSLGKDGET 246 (456)
T ss_pred ccccEEEEEEEEeCCCCCCCCCcEeecCcceEEEEecEEecCCCeEEeCCCCccEEEEeeEEECCC-CeEEeeccCCCCc
Confidence 357899999999862 2 10 1145676666789999999875432 33221
Q ss_pred --CCceeEecCEEEccc
Q 044741 170 --TGNHYYSKCYIEGAT 184 (196)
Q Consensus 170 --~gr~~f~~c~I~G~v 184 (196)
-...+++||.+.++.
T Consensus 247 ~~V~NV~v~n~~~~~T~ 263 (456)
T PLN03003 247 ATVENVCVQNCNFRGTM 263 (456)
T ss_pred ceEEEEEEEeeEEECCC
Confidence 123489999998863
No 102
>PLN02793 Probable polygalacturonase
Probab=63.49 E-value=46 Score=30.79 Aligned_cols=64 Identities=6% Similarity=0.035 Sum_probs=41.0
Q ss_pred ecCcEEEEEeEEEe------cCCC-----------------CCceEEEEEeCCcEEEEccEEeeceeEEEeCC-------
Q 044741 121 LASHFVARSLTIQN------TYGS-----------------YGKAVALRVSADRAAFYGCRILSYQHTLLDDT------- 170 (196)
Q Consensus 121 ~a~~~~~~nlti~N------s~g~-----------------~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~------- 170 (196)
..++++++||+|.| +.|- ...++++.-.+.++.++||...+.. .+-...
T Consensus 207 ~~~nv~i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~gDDcIaik~~s~nI~I~n~~c~~Gh-GisIGSlg~~~~~ 285 (443)
T PLN02793 207 NCRRVTISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRTGDDCISIVGNSSRIKIRNIACGPGH-GISIGSLGKSNSW 285 (443)
T ss_pred ccCcEEEEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeCCCCeEEecCCcCCEEEEEeEEeCCc-cEEEecccCcCCC
Confidence 35789999999975 2220 1246777767889999999885443 232211
Q ss_pred ---CceeEecCEEEccce
Q 044741 171 ---GNHYYSKCYIEGATD 185 (196)
Q Consensus 171 ---gr~~f~~c~I~G~vD 185 (196)
-...++||.+.++..
T Consensus 286 ~~V~nV~v~n~~~~~t~~ 303 (443)
T PLN02793 286 SEVRDITVDGAFLSNTDN 303 (443)
T ss_pred CcEEEEEEEccEEeCCCc
Confidence 124888888887643
No 103
>PLN02155 polygalacturonase
Probab=58.15 E-value=35 Score=31.10 Aligned_cols=63 Identities=14% Similarity=0.066 Sum_probs=39.3
Q ss_pred ecCcEEEEEeEEEe--c----CCC----------------C-CceEEEEEeCCcEEEEccEEeeceeEEEeCC-------
Q 044741 121 LASHFVARSLTIQN--T----YGS----------------Y-GKAVALRVSADRAAFYGCRILSYQHTLLDDT------- 170 (196)
Q Consensus 121 ~a~~~~~~nlti~N--s----~g~----------------~-~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~------- 170 (196)
..++++++||+|.| . .|- . ..++|+.-...++.+++|.+.+. ..+-...
T Consensus 175 ~~~nv~i~~v~I~~p~~~~NtDGidi~~s~nV~I~~~~I~~gDDcIaik~gs~nI~I~n~~c~~G-hGisIGS~g~~~~~ 253 (394)
T PLN02155 175 GCTNVVVRNVKLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGDDCVAIGPGTRNFLITKLACGPG-HGVSIGSLAKELNE 253 (394)
T ss_pred CeeeEEEEEEEEECCCCCCCCCccccccceeEEEEeeEEecCCceEEcCCCCceEEEEEEEEECC-ceEEeccccccCCC
Confidence 35789999999976 2 220 1 13556555567899999888643 2332211
Q ss_pred ---CceeEecCEEEccc
Q 044741 171 ---GNHYYSKCYIEGAT 184 (196)
Q Consensus 171 ---gr~~f~~c~I~G~v 184 (196)
-..+++||.+.|+.
T Consensus 254 ~~V~nV~v~n~~~~~t~ 270 (394)
T PLN02155 254 DGVENVTVSSSVFTGSQ 270 (394)
T ss_pred CcEEEEEEEeeEEeCCC
Confidence 13488888888753
No 104
>PRK11023 outer membrane lipoprotein; Provisional
Probab=56.64 E-value=32 Score=27.94 Aligned_cols=9 Identities=11% Similarity=0.294 Sum_probs=5.7
Q ss_pred CcEEEecCC
Q 044741 90 PFITISGTK 98 (196)
Q Consensus 90 ~~itl~G~~ 98 (196)
..|+|.|+=
T Consensus 77 G~V~L~G~V 85 (191)
T PRK11023 77 GKVLLTGQS 85 (191)
T ss_pred CEEEEEEEe
Confidence 347777763
No 105
>TIGR03352 VI_chp_3 type VI secretion lipoprotein, VC_A0113 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (PubMed:16763151). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al.
Probab=50.90 E-value=32 Score=26.81 Aligned_cols=8 Identities=38% Similarity=0.729 Sum_probs=5.7
Q ss_pred HhhccCCC
Q 044741 22 ITATCGST 29 (196)
Q Consensus 22 ~~~~~~~~ 29 (196)
++++|++.
T Consensus 12 lL~gC~s~ 19 (146)
T TIGR03352 12 LLAGCSSA 19 (146)
T ss_pred HHhhccCC
Confidence 46899764
No 106
>PRK10123 wcaM putative colanic acid biosynthesis protein; Provisional
Probab=49.91 E-value=1.9e+02 Score=25.81 Aligned_cols=62 Identities=26% Similarity=0.455 Sum_probs=39.8
Q ss_pred EEEEcCCeEeee----EEEcCCCCcEEEecC----CCCCeE------EEcCCCCCccccceEEeecCcEEEEEeEEEe
Q 044741 71 FISVAPGIYREK----IIVPANKPFITISGT----KASRTK------ITWSDGGSILDSATLTVLASHFVARSLTIQN 134 (196)
Q Consensus 71 ~I~I~~G~Y~E~----v~I~~~k~~itl~G~----~~~~t~------I~~~~~~~t~~sat~~v~a~~~~~~nlti~N 134 (196)
++.+.+|---|+ +.||..|. +.+.|. ++..-+ +.+..++ ....-|+-|++++.++++|....
T Consensus 58 tvvvpagl~cenint~ifip~gkt-l~v~g~l~gngrgrfvlqdg~qv~ge~~g-~~hnitldvrgsdc~ikgiamsg 133 (464)
T PRK10123 58 TVVVPAGLVCDNINTGIFIPPGKT-LHILGSLRGNGRGRFVLQDGSQVTGEEGG-SMHNITLDVRGSDCTIKGLAMSG 133 (464)
T ss_pred EEEecCccEecccccceEeCCCCe-EEEEEEeecCCceeEEEecCCEeecCCCc-eeeeEEEeeccCceEEeeeeecc
Confidence 888999987775 56776554 666554 433333 3333222 23345788899999999998764
No 107
>PRK09752 adhesin; Provisional
Probab=47.26 E-value=3.1e+02 Score=28.91 Aligned_cols=71 Identities=10% Similarity=0.073 Sum_probs=35.3
Q ss_pred ccceEEeecCcEEEEEeEEEecCCCCCceEEEEEeCC------cEEEEccEEeece------eEEEeCCCceeEecCEEE
Q 044741 114 DSATLTVLASHFVARSLTIQNTYGSYGKAVALRVSAD------RAAFYGCRILSYQ------HTLLDDTGNHYYSKCYIE 181 (196)
Q Consensus 114 ~sat~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d------~~~~~~c~~~g~Q------DTl~~~~gr~~f~~c~I~ 181 (196)
.+|.+........+.+..|+|.... +..=||+..++ .+.+.||.|.++. -.+|...+...+.+|...
T Consensus 112 GGAIya~~~~~itI~ns~F~nN~A~-g~GGAIYa~G~n~~g~v~l~I~NS~F~nN~A~~G~GGAIYs~ng~vtIsnS~F~ 190 (1250)
T PRK09752 112 GGAIFAKENSTLNLTDVIFSGNVAG-GYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFD 190 (1250)
T ss_pred ccEEEecCcceeEEeeeEEEccccC-CCCCEEEEcccCCCcceEEEEEecEEEccccccCCCCEEEEccCcEEEEeeEEe
Confidence 3454443223456667777766421 22334444332 1455566555552 236655555566666666
Q ss_pred ccce
Q 044741 182 GATD 185 (196)
Q Consensus 182 G~vD 185 (196)
++.=
T Consensus 191 nN~A 194 (1250)
T PRK09752 191 NNQA 194 (1250)
T ss_pred CCcc
Confidence 6553
No 108
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=44.75 E-value=12 Score=28.46 Aligned_cols=13 Identities=15% Similarity=0.225 Sum_probs=6.2
Q ss_pred hhhHHHHHHHHHH
Q 044741 8 VSILFVASTIVFA 20 (196)
Q Consensus 8 ~~~~~~~~~~~~~ 20 (196)
||+||++++++|+
T Consensus 1 RW~l~~iii~~i~ 13 (130)
T PF12273_consen 1 RWVLFAIIIVAIL 13 (130)
T ss_pred CeeeHHHHHHHHH
Confidence 4555555443333
No 109
>PLN03010 polygalacturonase
Probab=43.39 E-value=1.1e+02 Score=27.99 Aligned_cols=63 Identities=8% Similarity=0.055 Sum_probs=37.1
Q ss_pred ecCcEEEEEeEEEecC------CC-----------------CCceEEEEEeCCcEEEEccEEeeceeEEEeC----C---
Q 044741 121 LASHFVARSLTIQNTY------GS-----------------YGKAVALRVSADRAAFYGCRILSYQHTLLDD----T--- 170 (196)
Q Consensus 121 ~a~~~~~~nlti~Ns~------g~-----------------~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~----~--- 170 (196)
..++++++||+|.+.. |- .-..+|++-.+++..+.++...+.. .+-.. .
T Consensus 187 ~~~nv~i~~i~I~a~~~s~NTDGiDi~~s~nV~I~n~~I~~gDDcIaiksgs~ni~I~~~~C~~gH-GisIGS~g~~~~~ 265 (409)
T PLN03010 187 TCNYVAISKINILAPETSPNTDGIDISYSTNINIFDSTIQTGDDCIAINSGSSNINITQINCGPGH-GISVGSLGADGAN 265 (409)
T ss_pred ccccEEEEEEEEeCCCCCCCCCceeeeccceEEEEeeEEecCCCeEEecCCCCcEEEEEEEeECcC-CEEEccCCCCCCC
Confidence 4578999999998742 10 1135666666666777766554322 22211 1
Q ss_pred ---CceeEecCEEEccc
Q 044741 171 ---GNHYYSKCYIEGAT 184 (196)
Q Consensus 171 ---gr~~f~~c~I~G~v 184 (196)
...+|+||.+.++.
T Consensus 266 ~~V~nV~v~n~~i~~t~ 282 (409)
T PLN03010 266 AKVSDVHVTHCTFNQTT 282 (409)
T ss_pred CeeEEEEEEeeEEeCCC
Confidence 13488899888764
No 110
>PF03718 Glyco_hydro_49: Glycosyl hydrolase family 49; InterPro: IPR005192 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of dextranase (3.2.1.11 from EC) and isopullulanase (3.2.1.57 from EC) which are all members of glycoside hydrolase family 49 (GH49 from CAZY). Dextranase hydrolyses alpha-1,6-glycosidic bonds in dextran polymers.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1X0C_A 1WMR_A 2Z8G_B 1OGM_X 1OGO_X.
Probab=41.96 E-value=2.4e+02 Score=27.11 Aligned_cols=62 Identities=11% Similarity=0.140 Sum_probs=29.9
Q ss_pred cCcEEEEEeEEEecCCCCCceEEEEEeCC---cEEEEccEEeec----eeEEEeCCCceeEecCEEEccceeE
Q 044741 122 ASHFVARSLTIQNTYGSYGKAVALRVSAD---RAAFYGCRILSY----QHTLLDDTGNHYYSKCYIEGATDFI 187 (196)
Q Consensus 122 a~~~~~~nlti~Ns~g~~~qa~Al~v~~d---~~~~~~c~~~g~----QDTl~~~~gr~~f~~c~I~G~vDfI 187 (196)
+.+..++++||.++.. ..+-++-..+ ++.+.|-+..|. -|++-.-.+ ...+||.+.=+-|.|
T Consensus 328 ~q~~~~~GiTI~~pP~---~Sm~l~g~~~~~~~~~i~nyKqVGaW~~qtDGi~ly~n-S~i~dcF~h~nDD~i 396 (582)
T PF03718_consen 328 GQTLTCEGITINDPPF---HSMDLYGNENDKFSMNISNYKQVGAWYFQTDGIELYPN-STIRDCFIHVNDDAI 396 (582)
T ss_dssp SEEEEEES-EEE--SS----SEEEESSSGGGEEEEEEEEEEE---CTT----B--TT--EEEEEEEEESS-SE
T ss_pred cceEEEEeeEecCCCc---ceEEecCCccccccceeeceeeeeeEEeccCCccccCC-CeeeeeEEEecCchh
Confidence 4579999999997752 1222222222 367777777761 366655322 345788888887876
No 111
>PRK12450 foldase protein PrsA; Reviewed
Probab=41.73 E-value=39 Score=29.50 Aligned_cols=25 Identities=20% Similarity=0.240 Sum_probs=18.4
Q ss_pred CcccccchhhHHHHHHHHHHHHhhccCC
Q 044741 1 MKNYSQNVSILFVASTIVFASITATCGS 28 (196)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (196)
||+ .+++++.++.+++..++++|++
T Consensus 1 m~~---~kk~i~~~~~~~~~~~l~gc~~ 25 (309)
T PRK12450 1 MKQ---MNKLITGVVTLATVVTLSACQS 25 (309)
T ss_pred Cch---HHHHHHHHHHHHHHHHHHhcCC
Confidence 664 5677777777777777889975
No 112
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=41.34 E-value=75 Score=27.82 Aligned_cols=66 Identities=17% Similarity=0.257 Sum_probs=46.7
Q ss_pred EEee-cCcEEEEEeEEEecCCCCCceEEEEE-eCCcEEEEccEEeec-----eeEEEeCCC-ceeEecCEEEccceeEe
Q 044741 118 LTVL-ASHFVARSLTIQNTYGSYGKAVALRV-SADRAAFYGCRILSY-----QHTLLDDTG-NHYYSKCYIEGATDFIS 188 (196)
Q Consensus 118 ~~v~-a~~~~~~nlti~Ns~g~~~qa~Al~v-~~d~~~~~~c~~~g~-----QDTl~~~~g-r~~f~~c~I~G~vDfIf 188 (196)
+.+. .+++.++||+++|+.. -.+.+ ..+++.+++.++.+. -|.+=.... ...+++|+|...-|-|.
T Consensus 95 i~~~~~~~~~i~~i~~~nsp~-----w~~~~~~~~nv~i~~i~I~~~~~~~NtDGid~~~s~nv~I~n~~i~~gDD~Ia 168 (326)
T PF00295_consen 95 IRFNNCKNVTIEGITIRNSPF-----WHIHINDCDNVTISNITINNPANSPNTDGIDIDSSKNVTIENCFIDNGDDCIA 168 (326)
T ss_dssp EEEEEEEEEEEESEEEES-SS-----ESEEEESEEEEEEESEEEEEGGGCTS--SEEEESEEEEEEESEEEESSSESEE
T ss_pred eeeeeecceEEEeeEecCCCe-----eEEEEEccCCeEEcceEEEecCCCCCcceEEEEeeeEEEEEEeecccccCccc
Confidence 4443 5789999999998863 23444 578899999999864 477766554 44999999998878764
No 113
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=41.22 E-value=1.5e+02 Score=25.84 Aligned_cols=13 Identities=38% Similarity=0.601 Sum_probs=10.0
Q ss_pred ceeEecCEEEccc
Q 044741 172 NHYYSKCYIEGAT 184 (196)
Q Consensus 172 r~~f~~c~I~G~v 184 (196)
..-|.+|.|+|.=
T Consensus 195 NltliNC~I~g~Q 207 (277)
T PF12541_consen 195 NLTLINCTIEGTQ 207 (277)
T ss_pred CeEEEEeEEeccC
Confidence 3478899999863
No 114
>COG4594 FecB ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=40.79 E-value=63 Score=28.16 Aligned_cols=25 Identities=12% Similarity=0.312 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCC
Q 044741 9 SILFVASTIVFASITATCGSTATIP 33 (196)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (196)
++.++..||+...++++|++...-.
T Consensus 5 ~~~~i~~lll~lllva~C~~s~~~~ 29 (310)
T COG4594 5 KTAIILTLLLLLLLVAACSSSDNNQ 29 (310)
T ss_pred hhHHHHHHHHHHHHHHHhcCcCccc
Confidence 5566666777777899998874433
No 115
>TIGR03850 bind_CPR_0540 carbohydrate ABC transporter substrate-binding protein, CPR_0540 family. Members of this protein are the substrate-binding protein of a predicted carbohydrate transporter operon, together with permease subunits of ABC transporter homology families. This substrate-binding protein frequently co-occurs in genomes with a family of disaccharide phosphorylases, TIGR02336, suggesting that the molecule transported will include beta-D-galactopyranosyl-(1-3)-N-acetyl-D-glucosamine and related carbohydrates. Members of this family are sporadically strain by strain, often in species with a human host association, including Propionibacterium acnes and Clostridium perfringens, and Bacillus cereus.
Probab=39.11 E-value=1e+02 Score=27.34 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=20.5
Q ss_pred HHHhhccCCCCCCCCCCCCcEEEEEcC-CCCCCcchHHHHHHhC
Q 044741 20 ASITATCGSTATIPKDFSTAVLIRVEK-YGRGDFRTIQEAIDSV 62 (196)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~a~~i~V~~-~g~g~f~TIq~Ai~aa 62 (196)
.+.+++|+++...+.......+|++.. ++...-..+++.++..
T Consensus 14 ~~~l~gCg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~F 57 (437)
T TIGR03850 14 ASSLAGCGSGTADGASTGEEVTLKVAAFEGGYGTKMWEEVVEAF 57 (437)
T ss_pred HHHHhhccCCCCCCCCCCCCceEEEEEecCCchHHHHHHHHHHH
Confidence 345789987544332222345566642 2211123455665543
No 116
>PRK14864 putative biofilm stress and motility protein A; Provisional
Probab=38.99 E-value=1.6e+02 Score=21.81 Aligned_cols=36 Identities=17% Similarity=0.354 Sum_probs=17.7
Q ss_pred CCcchHHHHHHh-CCCCCCceEEEEEc-----CCeEeeeEEE
Q 044741 50 GDFRTIQEAIDS-VPDNNSELVFISVA-----PGIYREKIIV 85 (196)
Q Consensus 50 g~f~TIq~Ai~a-ap~~~~~~~~I~I~-----~G~Y~E~v~I 85 (196)
+.-..++++|.. +..-..+-++|.-. +|.|+-.-.|
T Consensus 60 gsp~d~~~~La~KAda~GA~yYrIi~~~e~~~~~~~~atA~i 101 (104)
T PRK14864 60 GSPDDAEREIQAKANAAGADYYVIVMVDETVVPGQWYSQAIL 101 (104)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEEEccccCCCCeEEEEEEE
Confidence 444667777752 32222334444433 4566655444
No 117
>PRK15396 murein lipoprotein; Provisional
Probab=38.82 E-value=31 Score=24.31 Aligned_cols=19 Identities=26% Similarity=0.494 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHhhccCCC
Q 044741 11 LFVASTIVFASITATCGST 29 (196)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~ 29 (196)
++..++.+.+.+++||.++
T Consensus 6 l~l~av~ls~~LLaGCAs~ 24 (78)
T PRK15396 6 LVLGAVILGSTLLAGCSSN 24 (78)
T ss_pred HHHHHHHHHHHHHHHcCCc
Confidence 3444443444577999964
No 118
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=38.52 E-value=22 Score=25.88 Aligned_cols=12 Identities=25% Similarity=0.351 Sum_probs=5.0
Q ss_pred HHHHHHHHHHhh
Q 044741 13 VASTIVFASITA 24 (196)
Q Consensus 13 ~~~~~~~~~~~~ 24 (196)
+++||+|+|-++
T Consensus 13 LA~lLlisSeva 24 (95)
T PF07172_consen 13 LAALLLISSEVA 24 (95)
T ss_pred HHHHHHHHhhhh
Confidence 333444444443
No 119
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=36.32 E-value=30 Score=19.06 Aligned_cols=21 Identities=33% Similarity=0.494 Sum_probs=11.0
Q ss_pred cccchhhHHHHHHHHHHHHhhccC
Q 044741 4 YSQNVSILFVASTIVFASITATCG 27 (196)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~ 27 (196)
.+-.+||+|..+. +| ..|+|+
T Consensus 4 ~~mmKkil~~l~a-~~--~LagCs 24 (25)
T PF08139_consen 4 LSMMKKILFPLLA-LF--MLAGCS 24 (25)
T ss_pred HHHHHHHHHHHHH-HH--HHhhcc
Confidence 3344566665444 22 247776
No 120
>PRK10871 nlpD lipoprotein NlpD; Provisional
Probab=36.16 E-value=41 Score=29.84 Aligned_cols=27 Identities=19% Similarity=0.208 Sum_probs=22.4
Q ss_pred CcccccchhhHHHHHHHHHHHHhhccC
Q 044741 1 MKNYSQNVSILFVASTIVFASITATCG 27 (196)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (196)
|..-|+..++.+++++.+++.++++|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~l~gCs 27 (319)
T PRK10871 1 MSAGSPKFTVRRIAALSLVSLWLAGCS 27 (319)
T ss_pred CCCCChhHHHHHHHHHHHHHHHhhhhc
Confidence 778888888888888777767789998
No 121
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=34.95 E-value=1.7e+02 Score=27.07 Aligned_cols=27 Identities=11% Similarity=0.019 Sum_probs=11.8
Q ss_pred eEEEEEeCCcEEEEccEEeeceeEEEe
Q 044741 142 AVALRVSADRAAFYGCRILSYQHTLLD 168 (196)
Q Consensus 142 a~Al~v~~d~~~~~~c~~~g~QDTl~~ 168 (196)
...+.+.+....++++.|...|-+|-+
T Consensus 215 ~EIISvKS~~N~ir~Ntf~es~G~ltl 241 (425)
T PF14592_consen 215 VEIISVKSSDNTIRNNTFRESQGSLTL 241 (425)
T ss_dssp SEEEEEESBT-EEES-EEES-SSEEEE
T ss_pred eeEEEeecCCceEeccEEEeccceEEE
Confidence 344455555555555555555555543
No 122
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=34.27 E-value=1.2e+02 Score=26.95 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=30.6
Q ss_pred eEEEEEe-CCcEEEEccEEeece------eEEEe-CCCce-eEecCEEEc
Q 044741 142 AVALRVS-ADRAAFYGCRILSYQ------HTLLD-DTGNH-YYSKCYIEG 182 (196)
Q Consensus 142 a~Al~v~-~d~~~~~~c~~~g~Q------DTl~~-~~gr~-~f~~c~I~G 182 (196)
...|.+. ++++.|+|..|+++. |.+-. +.+++ |..+|...+
T Consensus 116 g~gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~ 165 (345)
T COG3866 116 GGGLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSG 165 (345)
T ss_pred eceEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEecc
Confidence 3456664 999999999999886 66655 55666 888887765
No 123
>TIGR00247 conserved hypothetical protein, YceG family. This uncharacterized protein family, found in three of four microbial genomes, virtually always once per genome, includes YceG from Escherichia coli. This protein is encoded next to PabC, 4-amino-4-deoxychorismate lyase, in E. coli and numerous other proteobacteria, but that proximity is not conserved in other lineages. Numerous members of this family have been misannotated as aminodeoxychorismate lyase, apparently because of promiximty to PabC.
Probab=33.61 E-value=1.1e+02 Score=27.16 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=14.4
Q ss_pred CCcEEEEEcCCCCCCcchHHHHHHh
Q 044741 37 STAVLIRVEKYGRGDFRTIQEAIDS 61 (196)
Q Consensus 37 ~~a~~i~V~~~g~g~f~TIq~Ai~a 61 (196)
...+.+.|.+. ..++.|.+.|..
T Consensus 37 ~~~v~v~Ip~G--~s~~~Ia~~L~~ 59 (342)
T TIGR00247 37 KLVYEFNIEKG--TGVSKIAKELKK 59 (342)
T ss_pred CccEEEEECCC--CCHHHHHHHHHH
Confidence 33566777663 345777777764
No 124
>PRK10598 lipoprotein; Provisional
Probab=33.40 E-value=2e+02 Score=23.50 Aligned_cols=55 Identities=13% Similarity=0.341 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEc-CCeEeeeEEEc
Q 044741 11 LFVASTIVFASITATCGSTATIPKDFSTAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVA-PGIYREKIIVP 86 (196)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~-~G~Y~E~v~I~ 86 (196)
+|.++++++..+++||.+ -. .+.+.. .-|++.|+.--.- .-.+. ||...-.+.++
T Consensus 4 ~~~~~~~~~~~llsGC~s--------l~--~ysISE------~Ein~yL~k~~~~-----~k~~G~~gl~~a~i~l~ 59 (186)
T PRK10598 4 FLFAAALLVSGLLVGCNQ--------LT--QYTISE------QEINQYLAKHNNF-----EKQIGLPGVADAHIVLT 59 (186)
T ss_pred HHHHHHHHHHHHHhcccc--------cC--ceeecH------HHHHHHHHHhccH-----HHhcCCCceeeeEEEee
Confidence 343466677777899874 12 233433 3588888632111 12233 88877666664
No 125
>COG3218 ABC-type uncharacterized transport system, auxiliary component [General function prediction only]
Probab=33.38 E-value=36 Score=28.30 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=16.2
Q ss_pred CcccccchhhHHHHHHHHHHHHhhccCC
Q 044741 1 MKNYSQNVSILFVASTIVFASITATCGS 28 (196)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (196)
|+.+.+-++-+++++. +.+.+++|.+
T Consensus 3 l~~~p~~~~~l~~~la--~~a~L~gC~~ 28 (205)
T COG3218 3 LNIRPLRRLSLAAALA--LAATLAGCGP 28 (205)
T ss_pred cccchHHHHHHHHHHH--HHHHHhccCC
Confidence 5566666666665555 4455589954
No 126
>PRK00059 prsA peptidylprolyl isomerase; Provisional
Probab=33.20 E-value=60 Score=28.22 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=21.7
Q ss_pred hhhHHHHHHHHHHHHhhccCCCCCCCCCCCCcEEEEEcC
Q 044741 8 VSILFVASTIVFASITATCGSTATIPKDFSTAVLIRVEK 46 (196)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~V~~ 46 (196)
++++..+++.++...+++|+.....+.++......+|+.
T Consensus 5 ~~~~~~~~~~~l~~~~~gc~~~~~~~~~~~~~vvA~Vn~ 43 (336)
T PRK00059 5 KKLVASLLVGVFIFSAVGCNMIEKTPEAIAKSTVATVNG 43 (336)
T ss_pred HHHHHHHHHHHHHHhhccccccccCccccCCCceEEECC
Confidence 455555555455556689975433333344456667764
No 127
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional
Probab=32.25 E-value=1.1e+02 Score=27.87 Aligned_cols=21 Identities=19% Similarity=0.406 Sum_probs=14.0
Q ss_pred HhCCCCCCceEEEEEcCCeEe
Q 044741 60 DSVPDNNSELVFISVAPGIYR 80 (196)
Q Consensus 60 ~aap~~~~~~~~I~I~~G~Y~ 80 (196)
+.+.+|.+..++..++||+|.
T Consensus 80 EnIaPG~s~~l~~~L~pGtY~ 100 (375)
T PRK10378 80 ENIAPGFSQKMTANLQPGEYD 100 (375)
T ss_pred cccCCCCceEEEEecCCceEE
Confidence 455566555666667788886
No 128
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=31.15 E-value=1e+02 Score=24.24 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=27.7
Q ss_pred eCCcEEEEccEEee-ceeEEEeCCCc-eeEecCEEEccce
Q 044741 148 SADRAAFYGCRILS-YQHTLLDDTGN-HYYSKCYIEGATD 185 (196)
Q Consensus 148 ~~d~~~~~~c~~~g-~QDTl~~~~gr-~~f~~c~I~G~vD 185 (196)
..+.+.+.||.+.+ .+..+..+.+. ..+++|.|++-.+
T Consensus 183 ~~~~~~i~n~~~~~~~~~gi~i~~~~~~~i~n~~i~~~~~ 222 (225)
T PF12708_consen 183 GNNNITISNNTFEGNCGNGINIEGGSNIIISNNTIENCDD 222 (225)
T ss_dssp EEEEEEEECEEEESSSSESEEEEECSEEEEEEEEEESSSE
T ss_pred ecceEEEEeEEECCccceeEEEECCeEEEEEeEEEECCcc
Confidence 34688899999998 67778766544 4678888887544
No 129
>COG3521 Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.08 E-value=1.3e+02 Score=24.12 Aligned_cols=52 Identities=4% Similarity=0.087 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEE
Q 044741 12 FVASTIVFASITATCGSTATIPKDFSTAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISV 74 (196)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I 74 (196)
.+++.+...+.+++|+++... -|+..+++.+-.+ +.+|--+.|.+.|++|.|
T Consensus 6 ~a~~~l~al~~~sgCsss~~~--~pp~~l~l~l~a~---------~~~Np~~~g~a~Pl~Vrl 57 (159)
T COG3521 6 KAVLALFALLVLSGCSSSKPL--LPPSRLDLTLTAA---------PDLNPNANGEAAPLEVRL 57 (159)
T ss_pred HHHHHHHHHHHhhhhccCCCC--CCCcEEEEEEEec---------CCcCCCCCCCccceEEEE
Confidence 333443444445899554333 2345555555432 223333445555666555
No 130
>TIGR03042 PS_II_psbQ_bact photosystem II protein PsbQ. This protein through the member sll1638 from Synechocystis sp. PCC 6803, was shown to be part of the cyanobacteria photosystem II. It is homologous to (but quite diverged from) the chloroplast PsbQ protein, called oxygen-evolving enhancer protein 3 (OEE3). We designate this cyanobacteria protein PsbQ by homology.
Probab=30.81 E-value=62 Score=25.38 Aligned_cols=25 Identities=12% Similarity=0.202 Sum_probs=13.3
Q ss_pred hhhHHHHHHHHHHHHhhccCCCCCCC
Q 044741 8 VSILFVASTIVFASITATCGSTATIP 33 (196)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (196)
|+++..++.++... +.+|++|.+..
T Consensus 2 r~~~s~~Lv~~~~~-Lvsc~~p~~~~ 26 (142)
T TIGR03042 2 RSLASLLLVLLLTF-LVSCSGPAAAV 26 (142)
T ss_pred hhHHHHHHHHHHHH-HHHcCCCcccC
Confidence 45555555543333 56787654433
No 131
>smart00710 PbH1 Parallel beta-helix repeats. The tertiary structures of pectate lyases and rhamnogalacturonase A show a stack of parallel beta strands that are coiled into a large helix. Each coil of the helix represents a structural repeat that, in some homologues, can be recognised from sequence information alone. Conservation of asparagines might be connected with asparagine-ladders that contribute to the stability of the fold. Proteins containing these repeats most often are enzymes with polysaccharide substrates.
Probab=30.57 E-value=74 Score=15.65 Aligned_cols=18 Identities=6% Similarity=-0.099 Sum_probs=9.4
Q ss_pred cEEEEccEEeecee-EEEe
Q 044741 151 RAAFYGCRILSYQH-TLLD 168 (196)
Q Consensus 151 ~~~~~~c~~~g~QD-Tl~~ 168 (196)
+..+.+|.|.+... +++.
T Consensus 3 ~~~i~~n~i~~~~~~Gi~i 21 (26)
T smart00710 3 NVTIENNTIRNNGGDGIYI 21 (26)
T ss_pred CEEEECCEEEeCCCCcEEE
Confidence 44555666665544 4443
No 132
>COG1974 LexA SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]
Probab=30.38 E-value=3.1e+02 Score=22.58 Aligned_cols=52 Identities=13% Similarity=-0.015 Sum_probs=40.9
Q ss_pred CCceEEEEEeCCcEEEEccEEeeceeEEEeCCCc---eeEe--cCEEEccceeEecC
Q 044741 139 YGKAVALRVSADRAAFYGCRILSYQHTLLDDTGN---HYYS--KCYIEGATDFISGN 190 (196)
Q Consensus 139 ~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~gr---~~f~--~c~I~G~vDfIfG~ 190 (196)
.|+-++..++++.++++.-...|.+=-|...+.+ ..+. +|.|.|.+..++-.
T Consensus 143 ~GdiVvA~i~g~e~TvKrl~~~g~~i~L~p~Np~~~~i~~~~~~~~I~G~vvgv~r~ 199 (201)
T COG1974 143 NGDIVVALIDGEEATVKRLYRDGNQILLKPENPAYPPIPVDADSVTILGKVVGVIRD 199 (201)
T ss_pred CCCEEEEEcCCCcEEEEEEEEeCCEEEEEeCCCCCCCcccCccceEEEEEEEEEEec
Confidence 4677888898888999999999988888776543 2555 79999999888743
No 133
>PRK10626 hypothetical protein; Provisional
Probab=28.82 E-value=1.7e+02 Score=25.02 Aligned_cols=18 Identities=17% Similarity=0.069 Sum_probs=10.4
Q ss_pred hhhHHHHHHHHHHHHhhc
Q 044741 8 VSILFVASTIVFASITAT 25 (196)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~ 25 (196)
||++++++|+++.+.+++
T Consensus 3 rk~~l~~~L~l~s~~a~A 20 (239)
T PRK10626 3 RKMLLAALLSLTAMQAQA 20 (239)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 567777766555444443
No 134
>PRK12473 hypothetical protein; Provisional
Probab=27.98 E-value=1.1e+02 Score=25.25 Aligned_cols=56 Identities=11% Similarity=0.193 Sum_probs=36.0
Q ss_pred HHHHHhhccCCCCCCCCCCCCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeEe
Q 044741 18 VFASITATCGSTATIPKDFSTAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYR 80 (196)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y~ 80 (196)
+++...++|+ =-..+.+|+..+.+..+. .++|+-++.-.+...+.-.-.++-|++.
T Consensus 13 i~~~~~saCS-~~~~~~~paNGili~GdE------~~~~~I~~~yKd~tk~~~~y~vK~gt~~ 68 (198)
T PRK12473 13 ISFGALSGCS-LLGMIAEKANGFVLYGDE------EQVQQIMDKYKDEVKSKDFYKMKMGTLE 68 (198)
T ss_pred HHHHHhccee-ccCCCCCCCceEEEEEcH------HHHHHHHHHHhhhhhhhceEEEEEEEEc
Confidence 4444568887 333355677777666654 6788999877765333336668888876
No 135
>TIGR01098 3A0109s03R phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein. A subset of this model in which nearly all members exhibit genomic context with elements of phosphonate metabolism, particularly the C-P lyase system has been built (TIGR03431) as an equivalog. Nevertheless, there are members of this subfamily (TIGR01098) which show up sporadically on a phylogenetic tree that also show phosphonate context and are most likely competent to transport phosphonates.
Probab=25.37 E-value=1.2e+02 Score=24.44 Aligned_cols=21 Identities=24% Similarity=0.463 Sum_probs=13.9
Q ss_pred hhHHHHHHHHHHHHhhccCCC
Q 044741 9 SILFVASTIVFASITATCGST 29 (196)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~ 29 (196)
+.++++++++.++++++|+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (254)
T TIGR01098 3 RLLALLAALLGASLAAACSKK 23 (254)
T ss_pred hHHHHHHHHHHHHHHhhcCCc
Confidence 455566666667778899743
No 136
>PF12421 DUF3672: Fibronectin type III protein ; InterPro: IPR021034 This entry represents a region of bacterial and viral proteins that are typically between 126 and 146 amino acids in length. The signature is found at the C terminus in association with PF09327 from PFAM and PF00041 from PFAM. There are two completely conserved G residues that may be functionally important. Many of the proteins in this entry are annotated as fibronectin type III however there is little accompanying literature to confirm this. It is also found in Host specificity protein J from Enterobacteria phage lambda (Bacteriophage lambda).
Probab=24.72 E-value=1.1e+02 Score=23.45 Aligned_cols=11 Identities=18% Similarity=0.283 Sum_probs=5.6
Q ss_pred cEEEEEeEEEe
Q 044741 124 HFVARSLTIQN 134 (196)
Q Consensus 124 ~~~~~nlti~N 134 (196)
+.+++|.+|+.
T Consensus 6 ~~~~~n~~irG 16 (136)
T PF12421_consen 6 NLTFNNATIRG 16 (136)
T ss_pred cEEEEeeEEee
Confidence 34555555553
No 137
>PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This family contains metallopeptidases belonging to MEROPS peptidase family M30 (hyicolysin family, clan MA). Hyicolysin has a zinc ion which is liganded by two histidine and one glutamate residue.
Probab=24.11 E-value=66 Score=29.15 Aligned_cols=25 Identities=28% Similarity=0.481 Sum_probs=17.3
Q ss_pred eEEEEEcCCeEeeeEEEcCCCCcEEE
Q 044741 69 LVFISVAPGIYREKIIVPANKPFITI 94 (196)
Q Consensus 69 ~~~I~I~~G~Y~E~v~I~~~k~~itl 94 (196)
|++=.=..|+|.|+|.||..+. |++
T Consensus 339 p~~~~~~~g~y~~~~~vp~~~~-l~~ 363 (366)
T PF10460_consen 339 PVVRQDVSGTYSETVRVPAGTT-LSV 363 (366)
T ss_pred eeEecCCCceeeeeEecCCCCe-EEE
Confidence 3333346899999999997643 544
No 138
>COG0725 ModA ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=23.41 E-value=1.2e+02 Score=25.90 Aligned_cols=44 Identities=11% Similarity=0.264 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCCCCCCCcEEEEEcCCCCCCcchHHHHHHhC
Q 044741 10 ILFVASTIVFASITATCGSTATIPKDFSTAVLIRVEKYGRGDFRTIQEAIDSV 62 (196)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~V~~~g~g~f~TIq~Ai~aa 62 (196)
++++..+++.+.++-+|..+. +...+..++|-.. .|++++++.+
T Consensus 4 ~~~i~~~l~~~~~~~~~~~~~----~~~~~~~i~VfAA-----aSL~~~l~~i 47 (258)
T COG0725 4 MKKILALLLLVLLALGCAAGS----AAQEAATITVFAA-----ASLTDALEEI 47 (258)
T ss_pred hHHHHHHHHHHHHHHHhcccc----ccccCceEEEEEe-----hhhHHHHHHH
Confidence 344444444444455666543 2233456666554 3455665543
No 139
>TIGR03061 pip_yhgE_Nterm YhgE/Pip N-terminal domain. This family contains the N-terminal domain of a family of multiple membrane-spanning proteins of Gram-positive bacteria. One member was shown to be a host protein essential for phage infection, so many members of this family are called "phage infection protein". A separate model, TIGR03062, represents the conserved C-terminal domain. The domains are separated by regions highly variable in both length and sequence, often containing extended heptad repeats as described in model TIGR03057.
Probab=23.24 E-value=2.1e+02 Score=22.03 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCCCC--------cchHHHHHHhCCCCCCceEE-------EEEcCCeEeeeEEEcC
Q 044741 37 STAVLIRVEKYGRGD--------FRTIQEAIDSVPDNNSELVF-------ISVAPGIYREKIIVPA 87 (196)
Q Consensus 37 ~~a~~i~V~~~g~g~--------f~TIq~Ai~aap~~~~~~~~-------I~I~~G~Y~E~v~I~~ 87 (196)
......+|+.|.+.. -+.+-+.+++-+.-+ +.. =.++.|.|.--|+||+
T Consensus 42 ~~lpvaVVd~D~s~~~~~~~~~~s~~l~~~l~~~~~~~--~~~~~~~ea~~~l~~g~~~~~ivIP~ 105 (164)
T TIGR03061 42 DNLPVAVVNEDKGATYDGKTLNAGDDLVKELKKNDDLD--WHFVSAKEAEKGLADGKYYMVITIPE 105 (164)
T ss_pred CCCeEEEEECCCCCCcCCcccchHHHHHHHHhcCCCcc--eEEcCHHHHHHHhHcCcEEEEEEECc
Confidence 444556678876543 345666665433221 111 1256899999999986
No 140
>PF03077 VacA2: Putative vacuolating cytotoxin; InterPro: IPR004311 Proteins containing this domain include a number of Helicobacter pylori outer membrane proteins with multiple copies of this small conserved region.
Probab=22.89 E-value=1.2e+02 Score=20.32 Aligned_cols=27 Identities=22% Similarity=0.128 Sum_probs=20.7
Q ss_pred CCccccceEEeec-CcEEEEEeEEEecC
Q 044741 110 GSILDSATLTVLA-SHFVARSLTIQNTY 136 (196)
Q Consensus 110 ~~t~~sat~~v~a-~~~~~~nlti~Ns~ 136 (196)
+.+-.+|++..++ +++++.+++|.|..
T Consensus 27 ~~tGGgA~l~Fna~~~it~~~a~~~n~~ 54 (60)
T PF03077_consen 27 WGTGGGATLNFNATNNITINGANIDNNK 54 (60)
T ss_pred cccCCCeEEEEeccceEEEccceEeccc
Confidence 3445678888776 77999999999875
No 141
>PF03211 Pectate_lyase: Pectate lyase; InterPro: IPR004898 Pectate lyase is responsible for the maceration and soft-rotting of plant tissue. It catalyses the eliminative cleavage of pectate to produce oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends. Pectate lyase is an extracellular enzyme and is induced by pectin. It is subject to self-catabolite repression, and has been implicated in plant disease. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail []. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization.; GO: 0030570 pectate lyase activity, 0005576 extracellular region; PDB: 3T9G_B 3B90_B 3B8Y_A 3B4N_B 1EE6_A.
Probab=22.89 E-value=4.6e+02 Score=21.98 Aligned_cols=50 Identities=6% Similarity=0.124 Sum_probs=28.6
Q ss_pred EEeecCcEEEEEeEEEecCCCCCceEEEEEeCCcEEEEccEEeeceeEEEeCCC
Q 044741 118 LTVLASHFVARSLTIQNTYGSYGKAVALRVSADRAAFYGCRILSYQHTLLDDTG 171 (196)
Q Consensus 118 ~~v~a~~~~~~nlti~Ns~g~~~qa~Al~v~~d~~~~~~c~~~g~QDTl~~~~g 171 (196)
+...+ +.+|+|+-+++-. ..|+.++-.+....+.++...+-.|-++-++|
T Consensus 78 IHC~G-~Ctl~NVwwedVc---EDA~T~kg~~~~~~I~ggga~~A~DKV~Q~Ng 127 (215)
T PF03211_consen 78 IHCKG-SCTLENVWWEDVC---EDAATFKGDGGTVTIIGGGARNASDKVFQHNG 127 (215)
T ss_dssp EEEES-CEEEEEEEESS-S---SESEEEESSEEEEEEESTEEEEEEEEEEEE-S
T ss_pred eEEcC-CEEEEEEEecccc---eeeeEEcCCCceEEEeCCcccCCCccEEEecC
Confidence 34444 5566666655443 24444444444677777888877777776554
No 142
>COG4771 FepA Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]
Probab=22.53 E-value=2.2e+02 Score=28.00 Aligned_cols=15 Identities=33% Similarity=0.707 Sum_probs=11.4
Q ss_pred CCcchHHHHHHhCCC
Q 044741 50 GDFRTIQEAIDSVPD 64 (196)
Q Consensus 50 g~f~TIq~Ai~aap~ 64 (196)
..|+.+++||..+|.
T Consensus 65 ~p~rDl~ealr~vpG 79 (699)
T COG4771 65 RPYRDLAEALRTVPG 79 (699)
T ss_pred cchhhHHHHHhcCCc
Confidence 348888888888873
No 143
>COG2182 MalE Maltose-binding periplasmic proteins/domains [Carbohydrate transport and metabolism]
Probab=22.52 E-value=1.7e+02 Score=26.98 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=32.3
Q ss_pred HHHHHhhccCCCCC---CCCCCCCcEEEEEcCCCCCCcchHHHHHHhCCCCCCceEEEEEcCCeE
Q 044741 18 VFASITATCGSTAT---IPKDFSTAVLIRVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIY 79 (196)
Q Consensus 18 ~~~~~~~~~~~~~~---~~~~~~~a~~i~V~~~g~g~f~TIq~Ai~aap~~~~~~~~I~I~~G~Y 79 (196)
+.++.+.+|+++.. .........+++|-.++.+....|.++++....... +.+.|....|
T Consensus 16 ~~l~~l~a~~~~~~~~~~~~~~~~~~~ltvW~~~~~~~~~i~~~~~kfek~~g--i~V~i~~~~~ 78 (420)
T COG2182 16 LALSALAACTSSSSTTKSLSSTIAEKKLTVWVDGEKEVDGIKEAAAKFEKETG--IKVKIVEEDY 78 (420)
T ss_pred HHHHHHHhccCCCCCCccccCCcCCCeEEEEeCCchhHHHHHHHHHHHHHHHC--CeEEEEecCc
Confidence 44444677875522 122222233566666656777888888876544322 3455555555
No 144
>PF13617 Lipoprotein_19: YnbE-like lipoprotein
Probab=22.35 E-value=1.4e+02 Score=19.89 Aligned_cols=17 Identities=18% Similarity=0.305 Sum_probs=10.3
Q ss_pred HHHHHhhccCCCCCCCC
Q 044741 18 VFASITATCGSTATIPK 34 (196)
Q Consensus 18 ~~~~~~~~~~~~~~~~~ 34 (196)
+...++++|.|......
T Consensus 8 ~~~~~l~gCtPtV~v~a 24 (59)
T PF13617_consen 8 ALALALTGCTPTVKVEA 24 (59)
T ss_pred HHHHHHccCCCeEEeec
Confidence 34445689987655543
No 145
>PF11839 DUF3359: Protein of unknown function (DUF3359); InterPro: IPR021793 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 80 amino acids in length.
Probab=22.09 E-value=87 Score=22.95 Aligned_cols=20 Identities=35% Similarity=0.469 Sum_probs=11.6
Q ss_pred hhHHHHHHHHHHHHhhccCCC
Q 044741 9 SILFVASTIVFASITATCGST 29 (196)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~ 29 (196)
+.|+.++. +-+.+++||.++
T Consensus 3 k~l~sal~-~~~~L~~GCAst 22 (96)
T PF11839_consen 3 KLLLSALA-LAALLLAGCAST 22 (96)
T ss_pred hHHHHHHH-HHHHHHhHccCC
Confidence 44444444 445667899864
No 146
>TIGR02722 lp_ uncharacterized proteobacterial lipoprotein. Members of this protein family are restricted to the Proteobacteria, and all are predicted lipoproteins. In genomes that contain the thiK gene for the salvage enzyme thiamin kinase, the member of this family is encoded nearby.
Probab=22.08 E-value=1.4e+02 Score=24.08 Aligned_cols=10 Identities=30% Similarity=0.408 Sum_probs=6.7
Q ss_pred HHHhhccCCC
Q 044741 20 ASITATCGST 29 (196)
Q Consensus 20 ~~~~~~~~~~ 29 (196)
..++++|+++
T Consensus 12 al~l~gC~~~ 21 (189)
T TIGR02722 12 ALLLSGCVSQ 21 (189)
T ss_pred HHHHccCCCC
Confidence 3345899775
No 147
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=20.98 E-value=99 Score=20.62 Aligned_cols=17 Identities=24% Similarity=0.340 Sum_probs=11.4
Q ss_pred ccchhhHHHHHHHHHHH
Q 044741 5 SQNVSILFVASTIVFAS 21 (196)
Q Consensus 5 ~~~~~~~~~~~~~~~~~ 21 (196)
.|.-++++.++.++||.
T Consensus 7 ~~mtriVLLISfiIlfg 23 (59)
T PF11119_consen 7 SRMTRIVLLISFIILFG 23 (59)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 34447777777777776
No 148
>TIGR03524 GldJ gliding motility-associated lipoprotein GldJ. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldJ is a lipoprotein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae. Knockouts of GldJ abolish the gliding phenotype. GldJ is homologous to GldK. There is a GldJ homolog in Cytophaga hutchinsonii and several other species that has a different, shorter architecture and is represented by a separate model. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=20.88 E-value=1.8e+02 Score=27.91 Aligned_cols=10 Identities=20% Similarity=0.501 Sum_probs=8.0
Q ss_pred EEEEcCCeEe
Q 044741 71 FISVAPGIYR 80 (196)
Q Consensus 71 ~I~I~~G~Y~ 80 (196)
.|.|..|.|.
T Consensus 61 MV~IPGG~F~ 70 (559)
T TIGR03524 61 LVFVEGGTFT 70 (559)
T ss_pred eEEECCcEEE
Confidence 6888888875
No 149
>PRK04168 molybdate ABC transporter periplasmic substrate-binding protein; Provisional
Probab=20.07 E-value=2.2e+02 Score=25.09 Aligned_cols=20 Identities=15% Similarity=0.341 Sum_probs=10.5
Q ss_pred hhHHHHHHHHHHHHhhccCC
Q 044741 9 SILFVASTIVFASITATCGS 28 (196)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~ 28 (196)
++.+.+++++...++++|.+
T Consensus 6 ~~~~~~~~~~~~~~~~~c~~ 25 (334)
T PRK04168 6 KIILIILLLLLVLAFAGCVT 25 (334)
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 33444444444455578864
No 150
>TIGR02803 ExbD_1 TonB system transport protein ExbD, group 1. Members of this family are Gram-negative bacterial inner membrane proteins, generally designated ExbD, related to the TolR family modeled by TIGRFAMs TIGR02801. Members always are encoded next to a protein designated ExbB (TIGR02797), related to the TolQ family modeled by TIGRFAMs TIGR02796. ExbD and ExbB together form a proton channel through which they can harness the proton-motive force to energize TonB, which in turn energizes TonB-dependent receptors in the outer membrane. TonB-dependent receptors with known specificity tend to import siderophores or vitamin B12. A TonB system and Tol-Pal system often will co-exist in a single bacterial genome.
Probab=20.06 E-value=3.6e+02 Score=19.74 Aligned_cols=7 Identities=43% Similarity=0.690 Sum_probs=3.5
Q ss_pred eEEEEEc
Q 044741 69 LVFISVA 75 (196)
Q Consensus 69 ~~~I~I~ 75 (196)
+.+|.|.
T Consensus 49 ~~~i~I~ 55 (122)
T TIGR02803 49 PVYVSVK 55 (122)
T ss_pred CEEEEEe
Confidence 3455553
Done!