Query 044745
Match_columns 753
No_of_seqs 462 out of 3140
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:51:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044745.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044745hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 5E-121 2E-125 1059.7 51.0 603 130-753 1-641 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 9E-116 3E-120 1019.1 48.6 610 130-753 1-616 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.6E-81 1.2E-85 756.6 43.2 525 135-753 2-602 (926)
4 3afg_A Subtilisin-like serine 100.0 2.2E-61 7.4E-66 551.5 31.7 362 50-610 35-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.1E-58 3.9E-63 512.5 21.6 337 50-609 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 9.2E-56 3.1E-60 501.4 26.8 351 49-610 43-466 (471)
7 2p4e_P Proprotein convertase s 100.0 4E-58 1.4E-62 526.9 6.9 335 49-585 74-423 (692)
8 1r6v_A Subtilisin-like serine 100.0 1.4E-54 4.9E-59 500.8 26.8 369 48-619 29-449 (671)
9 1y9z_A Alkaline serine proteas 100.0 3.7E-54 1.2E-58 483.2 21.1 378 137-631 11-438 (441)
10 4h6x_A Thiazoline oxidase/subt 100.0 1.3E-53 4.4E-58 465.5 9.5 302 136-608 17-337 (357)
11 1dbi_A AK.1 serine protease; h 100.0 1.4E-51 4.9E-56 434.4 22.7 261 137-608 18-279 (280)
12 1r0r_E Subtilisin carlsberg; h 100.0 7.1E-52 2.4E-56 435.6 20.1 259 137-608 11-274 (274)
13 1gci_A Subtilisin; hydrolase, 100.0 1.2E-51 4E-56 432.3 21.5 258 137-608 11-269 (269)
14 1to2_E Subtilisin BPN'; serine 100.0 2.4E-51 8.1E-56 433.0 20.9 261 137-609 11-276 (281)
15 2x8j_A Intracellular subtilisi 100.0 1.9E-51 6.6E-56 442.8 17.8 265 137-608 28-310 (327)
16 1thm_A Thermitase; hydrolase(s 100.0 9.4E-51 3.2E-55 428.1 22.2 260 137-608 18-278 (279)
17 3zxy_A Subtilisin-like protein 100.0 5.3E-51 1.8E-55 431.3 14.9 265 147-608 3-274 (282)
18 2ixt_A 36KDA protease; serine 100.0 7E-50 2.4E-54 428.7 23.4 278 137-603 13-309 (310)
19 4h6w_A N-terminal cyanobactin 100.0 5.8E-51 2E-55 436.5 14.4 276 135-608 6-287 (306)
20 2z30_A TK-subtilisin; thermoco 100.0 2.2E-50 7.4E-55 434.0 15.8 265 137-609 15-317 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 2.7E-50 9.3E-55 438.6 14.7 271 137-609 30-329 (347)
22 3lpc_A APRB2; protease, subtil 100.0 1.6E-49 5.5E-54 431.5 16.8 295 137-609 19-337 (340)
23 1wmd_A Protease; alpha-beta hy 100.0 9.4E-49 3.2E-53 438.9 19.1 297 134-610 5-319 (434)
24 3lxu_X Tripeptidyl-peptidase 2 100.0 6.3E-48 2.1E-52 462.7 25.4 408 152-752 214-648 (1354)
25 1sh7_A Extracellular subtilisi 100.0 1.4E-47 5E-52 404.2 22.6 236 142-587 20-259 (284)
26 2b6n_A Proteinase K; S binding 100.0 4.5E-47 1.6E-51 399.8 21.8 237 142-586 22-262 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 8E-47 2.8E-51 397.9 21.2 240 137-587 18-261 (276)
28 2oxa_A Extracellular serine pr 100.0 2.4E-47 8.1E-52 443.7 16.5 291 137-612 57-428 (600)
29 2pwa_A Proteinase K; structure 100.0 5.1E-47 1.7E-51 399.0 17.0 240 143-604 24-272 (279)
30 2id4_A Kexin; KEX2, kexin, fur 100.0 8.5E-46 2.9E-50 421.2 18.5 278 137-610 41-343 (503)
31 1p8j_A Furin precursor; prohor 100.0 6.1E-46 2.1E-50 419.6 16.6 283 137-610 25-331 (471)
32 2qtw_B Proprotein convertase s 100.0 1.4E-45 4.7E-50 412.8 17.5 243 142-584 17-270 (546)
33 3f7m_A Alkaline serine proteas 100.0 2.8E-45 9.7E-50 386.8 16.7 231 142-587 24-263 (279)
34 3hjr_A Extracellular serine pr 100.0 3.6E-43 1.2E-47 409.8 22.2 312 137-609 57-425 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 5.3E-25 1.8E-29 250.9 6.4 99 244-347 273-384 (552)
36 1ga6_A Serine-carboxyl protein 99.8 2.5E-21 8.6E-26 210.4 8.3 101 246-347 90-207 (372)
37 2w2n_P Proprotein convertase s 99.0 3.5E-10 1.2E-14 101.3 6.7 79 48-128 35-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 98.9 1.9E-09 6.4E-14 122.0 9.9 99 246-346 262-374 (544)
39 3cnq_P Subtilisin BPN'; unclea 98.9 3.5E-09 1.2E-13 88.7 8.7 73 49-132 7-79 (80)
40 2qtw_A Proprotein convertase s 98.8 6.1E-09 2.1E-13 94.3 6.7 80 47-128 44-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.6 1E-07 3.5E-12 78.7 8.2 70 51-128 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 97.6 0.00023 7.9E-09 69.0 9.5 82 394-478 82-183 (194)
43 2z30_B TK-subtilisin; thermoco 97.5 0.00015 5.1E-09 57.6 5.6 62 51-127 2-63 (65)
44 2ys4_A Hydrocephalus-inducing 93.9 0.15 5E-06 45.5 7.7 70 672-750 42-112 (122)
45 2ek8_A Aminopeptidase; metallo 91.6 0.48 1.6E-05 51.8 9.3 61 408-469 111-182 (421)
46 3lxu_X Tripeptidyl-peptidase 2 90.0 0.22 7.5E-06 61.2 5.0 25 147-171 32-56 (1354)
47 3iib_A Peptidase M28; YP_92679 89.5 0.74 2.5E-05 50.7 8.5 71 407-478 124-223 (444)
48 1y9z_A Alkaline serine proteas 83.0 0.69 2.4E-05 50.9 3.7 31 488-526 182-212 (441)
49 2e6j_A Hydin protein; PAPD, st 81.1 1.9 6.5E-05 37.2 5.2 66 672-742 27-93 (112)
50 2r39_A FIXG-related protein; s 77.6 8 0.00027 33.8 8.2 54 672-728 32-85 (118)
51 3fed_A Glutamate carboxypeptid 73.9 2.4 8.1E-05 49.3 4.6 63 407-470 150-268 (707)
52 3kas_A Transferrin receptor pr 73.8 3.1 0.00011 47.7 5.6 61 408-469 128-230 (640)
53 3qbt_B Inositol polyphosphate 67.2 11 0.00037 34.1 6.6 55 672-728 44-102 (140)
54 3idu_A Uncharacterized protein 64.7 26 0.0009 31.0 8.5 51 671-726 33-84 (127)
55 2qsv_A Uncharacterized protein 63.2 17 0.00057 35.5 7.7 66 672-742 20-85 (220)
56 1z9l_A Vesicle-associated memb 61.9 28 0.00096 30.7 8.2 52 672-727 28-79 (128)
57 1msp_A MSP, major sperm protei 54.1 34 0.0011 30.2 7.3 50 674-727 28-77 (126)
58 1wic_A Hypothetical protein ri 52.1 30 0.001 31.7 6.8 51 673-727 37-87 (152)
59 3qis_A Inositol polyphosphate 51.9 24 0.00082 37.4 7.1 56 672-728 47-105 (366)
60 1row_A SSP-19, MSP-domain prot 50.2 47 0.0016 28.5 7.4 49 675-727 19-67 (109)
61 3zyz_A Beta-D-glucoside glucoh 49.3 39 0.0013 39.2 8.8 56 671-728 613-675 (713)
62 1m1s_A WR4; structural genomic 49.0 53 0.0018 28.6 7.5 51 674-728 26-76 (116)
63 2cri_A Vesicle-associated memb 47.1 43 0.0015 30.3 7.1 52 672-727 32-83 (147)
64 2kq1_A BH0266 protein; solutio 43.7 5.1 0.00018 35.2 0.1 51 677-728 59-111 (119)
65 2l04_A Major tail protein V; b 42.8 28 0.00096 28.9 4.6 37 701-743 8-44 (91)
66 2x41_A Beta-glucosidase; hydro 42.3 55 0.0019 38.0 8.7 70 655-728 597-678 (721)
67 2qsv_A Uncharacterized protein 41.0 94 0.0032 30.0 8.9 80 655-742 121-203 (220)
68 1wgl_A TOLL-interacting protei 36.7 21 0.00071 27.1 2.5 32 550-581 5-36 (59)
69 1w8o_A Bacterial sialidase; 3D 35.3 1.2E+02 0.0041 34.0 9.9 78 657-742 363-441 (601)
70 3abz_A Beta-glucosidase I; gly 34.1 1.1E+02 0.0039 36.0 9.6 163 540-727 618-798 (845)
71 3isy_A Bsupi, intracellular pr 32.2 2E+02 0.0069 25.0 8.6 69 671-741 18-103 (120)
72 1ni7_A ER75, hypothetical prot 25.3 47 0.0016 30.5 3.4 32 543-575 78-109 (155)
73 3g0m_A Cysteine desulfuration 21.4 45 0.0015 30.1 2.4 33 542-575 70-102 (141)
74 2l0d_A Cell surface protein; s 21.1 3.7E+02 0.013 23.0 8.2 25 671-695 19-44 (114)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=5.5e-121 Score=1059.70 Aligned_cols=603 Identities=40% Similarity=0.648 Sum_probs=542.6
Q ss_pred cCCCcccccccc--ccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccc---cCcceeeeeecC
Q 044745 130 TTRSWDFMGLNQ--SITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFT---CNNKIIGARYYT 204 (753)
Q Consensus 130 ~~~s~~~~g~~~--~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~---~n~kl~g~~~~~ 204 (753)
++++|+|+|+++ .+|..+.+|+||+|||||||||++||+|.+.+++|+|++|+|.|+.+.+|. ||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 478999999984 699999999999999999999999999999999999999999999999884 999999999994
Q ss_pred -CC-------CCCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCCHHHHHHHHH
Q 044745 205 -TD-------DISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCAETAILGAFD 276 (753)
Q Consensus 205 -g~-------~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~ 276 (753)
+. ..+..+++|..||||||||||||+.+++.+++|++.|.+.||||+|+|++||+|+. .||..+++++||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~-~g~~~~~i~~Ai~ 159 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFN-EGTFTSDLIAAMD 159 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEET-TEECHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCC-CCCCHHHHHHHHH
Confidence 21 23456788999999999999999999999999999999999999999999999998 7799999999999
Q ss_pred HHHHCCCcEEEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEe
Q 044745 277 DAIADGVDIITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVL 356 (753)
Q Consensus 277 ~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~ 356 (753)
||+++|+||||||||.. ...+..+++++++++|.++|++||+||||+|+...++.+.+||+|+|||++.||.|...+.+
T Consensus 160 ~A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~l 238 (649)
T 3i6s_A 160 QAVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL 238 (649)
T ss_dssp HHHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEE
T ss_pred HHHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEe
Confidence 99999999999999987 46778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccc--cccEEEEee-----cchhHHHHhc
Q 044745 357 GSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLA--KGKIVICQS-----FDGFNEVHKA 429 (753)
Q Consensus 357 ~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~--~gkiv~~~~-----~~k~~~~~~~ 429 (753)
++++.+.|.+++........+|++|.. ....|.+ ..+++.++ +||||+|.| .+|..+++++
T Consensus 239 gng~~~~g~sl~~~~~~~~~~plv~~~----------~~~~C~~--~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~ 306 (649)
T 3i6s_A 239 GNGLKIRGWSLFPARAFVRDSPVIYNK----------TLSDCSS--EELLSQVENPENTIVICDDNGDFSDQMRIITRAR 306 (649)
T ss_dssp TTSCEEEEECCCSSCBCEEEEEEECCT----------TTTTCCC--HHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHT
T ss_pred CCCcEEeeeecccCcccCcceeeEecc----------ccccccc--ccccccccccCCcEEEEeCCCccHHHHHHHHHhc
Confidence 999999999999887667789999976 3467988 78888877 999999998 6789999999
Q ss_pred CceEEEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEE-ccceeecCCCCCceecccCCCCCCCCCCCC
Q 044745 430 GAEGSVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANI-LSTEAVKDSEAPVVADFSSRGPNEIVPDIL 508 (753)
Q Consensus 430 Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i-~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~ 508 (753)
|+.|+| ++|+......+.+.+|.++++..+|+.|++|++++.+++++| +..+..+..+.+.++.||||||+...++++
T Consensus 307 Ga~g~i-~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~il 385 (649)
T 3i6s_A 307 LKAAIF-ISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGIS 385 (649)
T ss_dssp CSEEEE-ECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSC
T ss_pred CceEEE-EecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCcc
Confidence 999999 999884444778999999999999999999999999999999 888888888899999999999998778999
Q ss_pred CCceeeCCccEEeccCCCCCCCCCCCCc-ccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCC
Q 044745 509 KPDISAPGVDILAAFSPLGAVSDDPEDK-RQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSS 587 (753)
Q Consensus 509 KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~ 587 (753)
||||+|||++|+++++....+.....+. +...|..+||||||||||||++|||||+||+|||++||++||+||++++..
T Consensus 386 KPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~ 465 (649)
T 3i6s_A 386 KPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNT 465 (649)
T ss_dssp SCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTT
T ss_pred CCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCC
Confidence 9999999999999998865443333332 446899999999999999999999999999999999999999999998775
Q ss_pred CCCC---------CCCccCCCCCCccccCCCCeeeeCChhhHHHHHhcCCCCccccceecCCCcc--cCCCCCCCCCCCC
Q 044745 588 KNKD---------AEFAFGSGHINPVEAVNPGLVYETFEQDYIIMLCSMGYDERNIGKISGNIST--CPKGSDKATPKDL 656 (753)
Q Consensus 588 ~~~~---------~~~~~G~G~in~~~Al~~glv~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~~l 656 (753)
+.+. ++++||+|+||+.+|++||||||++.+||++|||++||+.++|+.|++.+++ |++ .+.+|
T Consensus 466 g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~-----~~~~l 540 (649)
T 3i6s_A 466 RKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN-----PSADL 540 (649)
T ss_dssp SSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC-----CCCCC
T ss_pred CCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC-----chhhc
Confidence 4432 4689999999999999999999999999999999999999999999998888 975 36799
Q ss_pred CCCcEEeee-CCCCcee--EEEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCC
Q 044745 657 NYPSMAAQV-SPGKSFT--INFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGA 733 (753)
Q Consensus 657 n~ps~~~~~-~~~~~~~--~~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~ 733 (753)
|||||++.+ +...... ++|+|||||||+.+++|++++++|.| ++|+|+|++|+|++.+|+++|+|||+......+.
T Consensus 541 NyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g-~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~ 619 (649)
T 3i6s_A 541 NYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKN-STISVSPQILVFKNKNEKQSYTLTIRYIGDEGQS 619 (649)
T ss_dssp CCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTT-EEEEEESSEEEECC-CCEEEEEEEEEECCC---C
T ss_pred CCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCC-CEEEEECCEEEEecCCCEEEEEEEEEecccCCCc
Confidence 999999987 4421112 89999999999989999999999999 9999999999998899999999999988656678
Q ss_pred eEEEEEEEEC--CCeEEEcccC
Q 044745 734 IVSTSLMWSD--GNHRVRSPIV 753 (753)
Q Consensus 734 ~~~G~~~~~~--~~~~v~~p~~ 753 (753)
|.||+|+|+| ++|.|||||+
T Consensus 620 ~~fg~l~w~~~~~~h~vrsPi~ 641 (649)
T 3i6s_A 620 RNVGSITWVEQNGNHSVRSPIV 641 (649)
T ss_dssp CCEEEEEEEETTSCCEEEEEEE
T ss_pred eEEEEEEEEcCCCCeEEEEeEE
Confidence 9999999998 9999999985
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=9.2e-116 Score=1019.11 Aligned_cols=610 Identities=50% Similarity=0.871 Sum_probs=523.5
Q ss_pred cCCCccccccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecC-CC--
Q 044745 130 TTRSWDFMGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYT-TD-- 206 (753)
Q Consensus 130 ~~~s~~~~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~-g~-- 206 (753)
++++|+|+|+++.+|.+..+|+||+|||||||||++||+|.|.++++++.+|+|.|+.+.+|.||+|++++++|. ++
T Consensus 1 tt~s~~flGl~~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~~~ 80 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPI 80 (621)
T ss_dssp CCSHHHHTTCCTTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSSSC
T ss_pred CCCChhHcCCCccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCCcc
Confidence 578999999987889999999999999999999999999999999999999999999999999999999999993 33
Q ss_pred -CCCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCCHHHHHHHHHHHHHCCCcE
Q 044745 207 -DISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCAETAILGAFDDAIADGVDI 285 (753)
Q Consensus 207 -~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~gvdV 285 (753)
..+..+++|++||||||||||||+..++.+.+|++.|.++||||+|+|++||+|++ .||..+++++||++|+++|+||
T Consensus 81 ~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~-~g~~~~di~~a~~~a~~~g~dV 159 (621)
T 3vta_A 81 SPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWN-DGCSDTDILAAYDDAIADGVDI 159 (621)
T ss_dssp CTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEET-TEECHHHHHHHHHHHHHHTCSE
T ss_pred CCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecC-CCCCHHHHHHHHHHHHHhCCCE
Confidence 24456789999999999999999999888888988899999999999999999999 8899999999999999999999
Q ss_pred EEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeCCCeEEeeE
Q 044745 286 ITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGY 365 (753)
Q Consensus 286 In~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~ 365 (753)
||||||+..+.++..+++++++++|.++|++||+||||+|+...++++.+||+++|++++.+|.+...+.++++..+.+.
T Consensus 160 in~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~ 239 (621)
T 3vta_A 160 ISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGV 239 (621)
T ss_dssp EEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEB
T ss_pred EEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeeee
Confidence 99999988666778899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEee--cchhHHHHhcCceEEEEeccCCcc
Q 044745 366 SINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQS--FDGFNEVHKAGAEGSVSLNDVEFN 443 (753)
Q Consensus 366 s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~--~~k~~~~~~~Ga~g~i~~~~~~~~ 443 (753)
+++.. ....+++++..+.............|.+ ..+++.+++|||++|.+ ..+..+....|+.+++ ++++..
T Consensus 240 s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi-~~~~~~- 313 (621)
T 3vta_A 240 SINTF--DNQYYPLVSGRDIPNTGFDKSTSRFCTD--KSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVL-MTSNTR- 313 (621)
T ss_dssp CCCCS--CCEEECEEETTTSCCTTCCHHHHTTTCT--TCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEE-EECSCC-
T ss_pred ecccC--CCcccccccccccccccccccccccccc--cccccccccceEEEEecCCChhHHhhhhcceeEEE-EEecCC-
Confidence 77654 3567888888776554444455677888 88999999999999988 5677788889999999 777644
Q ss_pred cccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEecc
Q 044745 444 KVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAF 523 (753)
Q Consensus 444 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~ 523 (753)
+..+.+.+|...++..++..+..|+..+..+.+++...+.......+.++.||||||+...++++||||+|||++|++++
T Consensus 314 ~~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~ 393 (621)
T 3vta_A 314 DYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAW 393 (621)
T ss_dssp SSCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEEC
T ss_pred CcccccccceEEECHHHHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccccccCCcceEeec
Confidence 33567889999999999999999999999999999555556667789999999999998789999999999999999999
Q ss_pred CCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCc
Q 044745 524 SPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINP 603 (753)
Q Consensus 524 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~ 603 (753)
+...... .......|..+||||||||||||++|||||+||+|||++||++||+||++++..+.+..+++||+|+||+
T Consensus 394 ~~~~~~~---~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~~ 470 (621)
T 3vta_A 394 PSVAPVG---GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNP 470 (621)
T ss_dssp CSSSCBT---TBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCCH
T ss_pred Ccccccc---CcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccCCCCCchhcCCCccCH
Confidence 8654222 1233467999999999999999999999999999999999999999999998887776789999999999
Q ss_pred cccCCCCeeeeCChhhHHHHHhcCCCCccccceecCCCcccCCCCCCCCCCCCCCCcEEeeeCCCCceeEEEEEEEEecC
Q 044745 604 VEAVNPGLVYETFEQDYIIMLCSMGYDERNIGKISGNISTCPKGSDKATPKDLNYPSMAAQVSPGKSFTINFPRTVTNVG 683 (753)
Q Consensus 604 ~~Al~~glv~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~rtvtn~~ 683 (753)
.+|++||||||++.+||+.|||++||+.++++.+++....|+.. ......+||||||++....+...+++|+|||||||
T Consensus 471 ~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg 549 (621)
T 3vta_A 471 LKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSG-NTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVA 549 (621)
T ss_dssp HHHSCCSEECCCCGGGCC------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECS
T ss_pred HHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCC-CcCcccccccccEEEEccCCCceEEEEEEEEEccC
Confidence 99999999999999999999999999999999999998889875 45567899999999986655557899999999999
Q ss_pred CCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCCeEEEEEEEECCCeEEEcccC
Q 044745 684 LANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGAIVSTSLMWSDGNHRVRSPIV 753 (753)
Q Consensus 684 ~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~~~~~~v~~p~~ 753 (753)
....+|++++++|.| ++|+|+|++|+|++.+|+++|+|||+.. ..+.|+||+|+|+|++|.|||||+
T Consensus 550 ~~~~ty~~~v~~p~g-v~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l~w~d~~h~Vr~Pi~ 616 (621)
T 3vta_A 550 PQASTYRAMISAPQG-LTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASLVWSDGVHYVRSPIT 616 (621)
T ss_dssp SSCEEEEEEEECCSS-EEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEEEEECSSCCCEEEEE
T ss_pred CCCeEEEEEEECCCC-cEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEEEEEcCCEEEEeCEE
Confidence 999999999999999 9999999999999889999999999864 568899999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.6e-81 Score=756.64 Aligned_cols=525 Identities=22% Similarity=0.269 Sum_probs=416.6
Q ss_pred cccccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCc-------------cccCcceeeee
Q 044745 135 DFMGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRN-------------FTCNNKIIGAR 201 (753)
Q Consensus 135 ~~~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~-------------f~~n~kl~g~~ 201 (753)
++++++ .+|..+.+|+||+|||||||||++||+|.+. ..|++.|..+.. .+||+|+++++
T Consensus 2 d~i~~~-~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~ 74 (926)
T 1xf1_A 2 DPSQVK-TLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYH 74 (926)
T ss_dssp CTTCCH-HHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEE
T ss_pred CccccH-HHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceee
Confidence 457888 8999999999999999999999999999843 467777754322 26999999999
Q ss_pred ecCCCCCCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC--CCHHHHHHHHHHHH
Q 044745 202 YYTTDDISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG--CAETAILGAFDDAI 279 (753)
Q Consensus 202 ~~~g~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g--~~~~~i~~ai~~a~ 279 (753)
+|... ....|+.||||||||||||+...+.+. .+.+.||||+|+|++||+|+. .+ +..+++++||+||+
T Consensus 75 ~~~~~----~~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~-~g~~~~~~~i~~Ai~~Ai 145 (926)
T 1xf1_A 75 DYSKD----GKTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIV-NGLADYARNYAQAIRDAI 145 (926)
T ss_dssp ESCCC----SCCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCC-SCHHHHHHHHHHHHHHHH
T ss_pred ccccC----CCCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecC-CCCCCcHHHHHHHHHHHH
Confidence 99543 122389999999999999997554332 245699999999999999987 55 56678999999999
Q ss_pred HCCCcEEEeecCCCCC-CCCcccHHHHHHHHHhhCCcEEEEecCCCCCCC-------------CCccC--CCCceEEeec
Q 044745 280 ADGVDIITISLGGQNT-LNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFI-------------GSTVS--VAPWLMSVAA 343 (753)
Q Consensus 280 ~~gvdVIn~SlG~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------------~~~~~--~~p~vitVga 343 (753)
++|+||||||||+... .....++++.++++|.++|++||+||||+|+.. .++.+ .+||+|+|||
T Consensus 146 ~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA 225 (926)
T 1xf1_A 146 NLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVAS 225 (926)
T ss_dssp HTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEE
T ss_pred HhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEec
Confidence 9999999999998632 344567889999999999999999999999632 22333 4799999999
Q ss_pred ccCccceeeeEEe-CCCeEEeeEEeccCC--CCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEee-
Q 044745 344 SNTDRLFVDKVVL-GSGQTLVGYSINSFS--SKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQS- 419 (753)
Q Consensus 344 ~~~~~~~~~~~~~-~~~~~~~g~s~~~~~--~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~- 419 (753)
++.++.+...+.+ +++....+.+++... ..+..+|+++... .|.+ ..+ .+++||||+|+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~--~~~--~~v~Gkivl~~rg 289 (926)
T 1xf1_A 226 YSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKE--DDF--KDVKGKIALIERG 289 (926)
T ss_dssp EBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCST--TTT--TTCTTSEEEEECC
T ss_pred cccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCc--cch--hhcCCeEEEEECC
Confidence 9999999988887 555444444443321 2367899999754 3654 444 589999999998
Q ss_pred ----cchhHHHHhcCceEEEEeccCCcccc----cccccccEEEeehhhHHHHHHHHhcCCCCeEEE-ccceeecCCCCC
Q 044745 420 ----FDGFNEVHKAGAEGSVSLNDVEFNKV----SSVVSLPAVALNEDNFNSIYSYLKSTKKPEANI-LSTEAVKDSEAP 490 (753)
Q Consensus 420 ----~~k~~~~~~~Ga~g~i~~~~~~~~~~----~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i-~~~~~~~~~~~~ 490 (753)
.+|..+++++|+.|+| ++|+..... .....+|...++..++..|.+ .+..++++ ...........+
T Consensus 290 ~~~~~~k~~~~~~~Ga~gvi-~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~~ 364 (926)
T 1xf1_A 290 DIDFKDKIAKAKKAGAVGVL-IYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASGT 364 (926)
T ss_dssp SSCHHHHHHHHHHTTCSEEE-EECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSCS
T ss_pred CCCHHHHHHHHHhCCCcEEE-EEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCcc
Confidence 6788999999999999 888765432 456789999999999988874 45556665 233345566678
Q ss_pred ceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHh----hCC
Q 044745 491 VVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKS----FHP 566 (753)
Q Consensus 491 ~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~P 566 (753)
.++.||||||+. ++++||||+|||++|+++++.+ .|..+||||||||||||++|||+| .||
T Consensus 365 ~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P 429 (926)
T 1xf1_A 365 KLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQYP 429 (926)
T ss_dssp BCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHSSS
T ss_pred eeccccCCCCCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhccCC
Confidence 999999999986 9999999999999999999763 799999999999999999999964 599
Q ss_pred CCCHHH----HHHHHHhcCCCCCCCCC--CCCCCccCCCCCCccccCCCCeeeeCChhhHHHHHhcCCCCccccceecCC
Q 044745 567 DWSPSA----IKSAIMTTAWPMNSSKN--KDAEFAFGSGHINPVEAVNPGLVYETFEQDYIIMLCSMGYDERNIGKISGN 640 (753)
Q Consensus 567 ~ls~~~----ik~~L~~TA~~~~~~~~--~~~~~~~G~G~in~~~Al~~glv~~~~~~~~~~~lc~~~~~~~~~~~~~~~ 640 (753)
+|+|+| ||++||+||+++...+. ..++++||+|+||+.+|++|.+ |||..++++.
T Consensus 430 ~~sp~~~~~~Iks~L~~TA~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~-------- 490 (926)
T 1xf1_A 430 DMTPSERLDLAKKVLMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS-------- 490 (926)
T ss_dssp SSHHHHHHHHHHHHHHHHSBCCEEGGGTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS--------
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccCCCCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc--------
Confidence 999997 99999999998865321 1146899999999999999865 6787665432
Q ss_pred CcccCCCCCCCCCCCCCCCcEEeeeCCCCceeEEEEEEEEecCCCC--eeEEEEEec--CCceEEEEEEcCeEEEe----
Q 044745 641 ISTCPKGSDKATPKDLNYPSMAAQVSPGKSFTINFPRTVTNVGLAN--STYKAKILQ--NSKIVSIKVVPESLSFK---- 712 (753)
Q Consensus 641 ~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~rtvtn~~~~~--~~y~~~~~~--~~g~~~v~v~p~~~~~~---- 712 (753)
+|.+..+. .+.+++|||||+|..+ .+|++.+.. |.+ ..++|+|..|.|.
T Consensus 491 -------------------~i~l~~~~---~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~-~~~~v~p~~l~~~~~~~ 547 (926)
T 1xf1_A 491 -------------------KVHLNNVS---DKFEVTVNVHNKSDKPQELYYQATVQTDKVDG-KHFALAPKVLYETSWQK 547 (926)
T ss_dssp -------------------CEEEEEEC---SEEEEEEEEEECSSSCEEEEEEEEEEEEEEET-TEEEEEEEEEEECCCEE
T ss_pred -------------------eeeccccC---ccEEEEEEEEEeCCCceeEEEEEEEEeccCCC-ceEEeccceeEeccCCe
Confidence 23333332 3678999999999754 578887765 556 7888888776655
Q ss_pred ---eCCcEEEEEEEEEecc--------CCCCCeEEEEEEEE--CCCeE-EEcccC
Q 044745 713 ---SLNEKKSFSVTVTGKG--------LPNGAIVSTSLMWS--DGNHR-VRSPIV 753 (753)
Q Consensus 713 ---~~~~~~~~~vt~~~~~--------~~~~~~~~G~~~~~--~~~~~-v~~p~~ 753 (753)
++||+++|+|||++.. .+++.|+||+|+|+ ++.|. ||+||+
T Consensus 548 vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~ 602 (926)
T 1xf1_A 548 ITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYI 602 (926)
T ss_dssp EEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEE
T ss_pred EEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeE
Confidence 4599999999999862 34677999999998 56675 999984
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=2.2e-61 Score=551.54 Aligned_cols=362 Identities=27% Similarity=0.413 Sum_probs=292.6
Q ss_pred CceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCHHHHHHh-----------hcCCCeE
Q 044745 50 LMVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTDHERQKL-----------ASMEGVV 118 (753)
Q Consensus 50 ~~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L-----------~~~p~V~ 118 (753)
.-.|||.|++... .+...++++.+ ..+++++| ..|+||+++++.+++++| +++|+|+
T Consensus 35 ~~~~iV~~~~~~~-----~~~~~~~~~~~------g~~v~~~~-~~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~ 102 (539)
T 3afg_A 35 EVSTIIMFDNQAD-----KEKAVEILDFL------GAKIKYNY-HIIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQ 102 (539)
T ss_dssp EEEEEEEESSHHH-----HHHHHHHHHHH------TCEEEEEC-SSSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEE
T ss_pred ceEEEEEECCCCC-----HHHHHHHHHhc------CCeEEEEe-eeeeEEEEEeCHHHHHHHHhhccccccccccCCCee
Confidence 4579999997543 12223344433 36899999 479999999999999999 8999999
Q ss_pred EEEeCceeccccC-----CCccccccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCcccc
Q 044745 119 SVFPSRTLQLHTT-----RSWDFMGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTC 193 (753)
Q Consensus 119 ~v~~~~~~~~~~~-----~s~~~~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~ 193 (753)
+|++++.+++... .....++++ .+|..+++|+||+|||||||||++||+|.+
T Consensus 103 ~v~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~G~gv~VaViDtGid~~Hpdl~~---------------------- 159 (539)
T 3afg_A 103 FIQEDYVVKVAVETEGLDESAAQVMAT-NMWNLGYDGSGITIGIIDTGIDASHPDLQG---------------------- 159 (539)
T ss_dssp EEEECCEEECC-----------CCBCS-CCBCCSCCCTTCEEEEEESBCCTTSGGGTT----------------------
T ss_pred EEEecccccccCccccCCccccccCcH-hHHhcCCCCCCcEEEEEecCCCCCChHHhC----------------------
Confidence 9999999887542 223345666 899999999999999999999999999974
Q ss_pred CcceeeeeecCCCCCCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHH
Q 044745 194 NNKIIGARYYTTDDISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAIL 272 (753)
Q Consensus 194 n~kl~g~~~~~g~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~ 272 (753)
++++.++|.+. ...+.|++||||||||||+|+... ..|.+.||||+|+|+.+|++++ .| +..++++
T Consensus 160 --~i~~~~d~~~~---~~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~-~g~~~~~~i~ 226 (539)
T 3afg_A 160 --KVIGWVDFVNG---KTTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNG-QGSGSISDII 226 (539)
T ss_dssp --TEEEEEETTTC---CSSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCT-TSEEEHHHHH
T ss_pred --CEeeeEECCCC---CCCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecC-CCCcCHHHHH
Confidence 35566677432 145678999999999999998532 2344589999999999999988 55 7889999
Q ss_pred HHHHHHHHC----CCcEEEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCC--ccCCCCceEEeecccC
Q 044745 273 GAFDDAIAD----GVDIITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGS--TVSVAPWLMSVAASNT 346 (753)
Q Consensus 273 ~ai~~a~~~----gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--~~~~~p~vitVga~~~ 346 (753)
+||+||+++ |++|||||||... .....+++..+++++.++|++||+||||+|+...+ .+...+++|+|||++.
T Consensus 227 ~ai~~a~~~~~~~g~~Vin~SlG~~~-~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~ 305 (539)
T 3afg_A 227 NGVDWAVQNKDKYGIKVINLSLGSSQ-SSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK 305 (539)
T ss_dssp HHHHHHHHTHHHHTEEEEEECCCCCS-CCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT
T ss_pred HHHHHHHhhhhhcCCcEEEeCCCCCC-CCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC
Confidence 999999975 8999999999873 34456889999999999999999999999986543 4557899999998542
Q ss_pred ccceeeeEEeCCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHH
Q 044745 347 DRLFVDKVVLGSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEV 426 (753)
Q Consensus 347 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~ 426 (753)
+
T Consensus 306 ~------------------------------------------------------------------------------- 306 (539)
T 3afg_A 306 Y------------------------------------------------------------------------------- 306 (539)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred HhcCceEEEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCC
Q 044745 427 HKAGAEGSVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPD 506 (753)
Q Consensus 427 ~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~ 506 (753)
+.++.||||||+. ++
T Consensus 307 ---------------------------------------------------------------~~~a~fSs~Gp~~--~~ 321 (539)
T 3afg_A 307 ---------------------------------------------------------------DVITDFSSRGPTA--DN 321 (539)
T ss_dssp ---------------------------------------------------------------SCBCSSSCCCCCT--TC
T ss_pred ---------------------------------------------------------------cccccccCCCCCC--CC
Confidence 4578999999987 89
Q ss_pred CCCCceeeCCccEEeccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCC
Q 044745 507 ILKPDISAPGVDILAAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNS 586 (753)
Q Consensus 507 ~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~ 586 (753)
++||||+|||++|+++++..... .......|..++|||||||||||++|||+|++|+|++++||++|++||+++..
T Consensus 322 ~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~ 397 (539)
T 3afg_A 322 RLKPEVVAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKP 397 (539)
T ss_dssp BCCCSEEEECSSEEEECCTTCCC----SEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSG
T ss_pred CCcccEecCcCCEEeeccCCCCC----CCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCC
Confidence 99999999999999998654211 11112369999999999999999999999999999999999999999998864
Q ss_pred CCCCCCCCccCCCCCCccccCCCC
Q 044745 587 SKNKDAEFAFGSGHINPVEAVNPG 610 (753)
Q Consensus 587 ~~~~~~~~~~G~G~in~~~Al~~g 610 (753)
.+. .+..||+|+||+.+|++..
T Consensus 398 ~~~--~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 398 DEI--ADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp GGC--SBTTTBTCBCCHHHHHTGG
T ss_pred CCC--CccCccCCccCHHHHhhhc
Confidence 332 2688999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.1e-58 Score=512.49 Aligned_cols=337 Identities=24% Similarity=0.320 Sum_probs=276.4
Q ss_pred CceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceeccc
Q 044745 50 LMVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTDHERQKLASMEGVVSVFPSRTLQLH 129 (753)
Q Consensus 50 ~~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~~~ 129 (753)
+.+|||+|++... .++++++. ..+++++|. .+++|+++++.+++++|+++|+|++|++++.++++
T Consensus 2 ~~~~iV~~~~~~~--------~~~~~~~~------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~ 66 (395)
T 2z2z_A 2 TIRVIVSVDKAKF--------NPHEVLGI------GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLL 66 (395)
T ss_dssp EEEEEEEECTTTC--------CHHHHHHT------TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEEC
T ss_pred cEEEEEEECCCcc--------HHHHHHHc------CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeeccc
Confidence 3689999998753 22344333 468999995 69999999999999999999999999999998764
Q ss_pred cC--------------CCcc--ccccccccccCCCCCCC--cEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCcc
Q 044745 130 TT--------------RSWD--FMGLNQSITRKRSVESD--IIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNF 191 (753)
Q Consensus 130 ~~--------------~s~~--~~g~~~~~~~~~~~G~G--V~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f 191 (753)
.. ..|. .++++ .+|..+ +|+| |+|||||||||++||+|.++
T Consensus 67 ~~~~~~~~~~~~~~~~~~w~~~~i~~~-~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~------------------- 125 (395)
T 2z2z_A 67 GKPSWLGGGSTQPAQTIPWGIERVKAP-SVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------------- 125 (395)
T ss_dssp CEECC------CCSCCCCHHHHHTTCG-GGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG-------------------
T ss_pred CCCCcccccccCccccCCcchhhcCHH-HHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc-------------------
Confidence 32 1221 23445 889998 9999 99999999999999999853
Q ss_pred ccCcceeeeeecC-CCCC-CCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCH
Q 044745 192 TCNNKIIGARYYT-TDDI-SGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAE 268 (753)
Q Consensus 192 ~~n~kl~g~~~~~-g~~~-~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~ 268 (753)
+...++|. +... +..++.|+.||||||||||+|..+ + .| +.||||+|+|+.+|++++ .| +..
T Consensus 126 -----~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~n-~---~g-----~~GvAp~a~l~~~kv~~~-~g~~~~ 190 (395)
T 2z2z_A 126 -----IAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALNN-D---IG-----VVGVAPGVQIYSVRVLDA-RGSGSY 190 (395)
T ss_dssp -----EEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCCS-S---SS-----CCCSSTTCEEEEEECSCT-TSEEEH
T ss_pred -----cccCccccCCcccCCCCCCCCCCCCHHHHHHHHHeecC-C---Cc-----eEEECCCCEEEEEEEecC-CCCccH
Confidence 33334442 2100 011246899999999999999731 1 12 389999999999999988 55 788
Q ss_pred HHHHHHHHHHHHC--------------------CCcEEEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCC
Q 044745 269 TAILGAFDDAIAD--------------------GVDIITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFI 328 (753)
Q Consensus 269 ~~i~~ai~~a~~~--------------------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~ 328 (753)
+++++||+||+++ +++|||||||.... ...+..++.++.++|++||+||||+|...
T Consensus 191 ~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~ 266 (395)
T 2z2z_A 191 SDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD----DSYLYDMIIQAYNAGIVIVAASGNEGAPS 266 (395)
T ss_dssp HHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC----CHHHHHHHHHHHHTTCEEEEECCSSCCSS
T ss_pred HHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC----CHHHHHHHHHHHHCCCEEEEECCCCCCCC
Confidence 9999999999998 99999999998732 35677788889999999999999999887
Q ss_pred CCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccc
Q 044745 329 GSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSR 408 (753)
Q Consensus 329 ~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 408 (753)
..++...|++|+|||++.+
T Consensus 267 ~~~Pa~~~~vi~Vga~~~~------------------------------------------------------------- 285 (395)
T 2z2z_A 267 PSYPAAYPEVIAVGAIDSN------------------------------------------------------------- 285 (395)
T ss_dssp CCBTTTSTTEEEEEEECTT-------------------------------------------------------------
T ss_pred CCCccCCCCEEEEEEecCC-------------------------------------------------------------
Confidence 7788889999999986432
Q ss_pred cccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCC
Q 044745 409 LAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSE 488 (753)
Q Consensus 409 ~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~ 488 (753)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCC--
Q 044745 489 APVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHP-- 566 (753)
Q Consensus 489 ~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-- 566 (753)
+.++.||+||| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++|
T Consensus 286 -~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~VaG~aAll~~~~p~~ 341 (395)
T 2z2z_A 286 -DNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQK 341 (395)
T ss_dssp -SCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHHHHHHHHHHHHhCccc
Confidence 46788999998 6799999999998764 799999999999999999999999999
Q ss_pred -----------CCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCCC
Q 044745 567 -----------DWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVNP 609 (753)
Q Consensus 567 -----------~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~ 609 (753)
.|++.+||++|++||+++...+ .+..||+|+||+.+|++.
T Consensus 342 ~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g---~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 342 YGKILPVGTFDDISKNTVRGILHITADDLGPTG---WDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS---SBTTTBTCBCCHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHhhccccCCCC---CCCCccCceeCHHHHHHH
Confidence 9999999999999999987554 368899999999999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=9.2e-56 Score=501.44 Aligned_cols=351 Identities=17% Similarity=0.246 Sum_probs=276.6
Q ss_pred cCceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCHHHHHHhhc-CCCeEEEEeCceec
Q 044745 49 FLMVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTDHERQKLAS-MEGVVSVFPSRTLQ 127 (753)
Q Consensus 49 ~~~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~-~p~V~~v~~~~~~~ 127 (753)
..+.|||++++.. ...+++++. +.++.+.| ..+++|+++++.+++++|++ +|+|++|++++.++
T Consensus 43 ~~~~yiv~~~~~~--------~~~~~~~~~------g~~v~~~~-~~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~ 107 (471)
T 3t41_A 43 EELYYSVEYKNTA--------TFNKLVKKK------SLNVVYNI-PELHVAQIKMTKMHANALANYKNDIKYINATCSTC 107 (471)
T ss_dssp CCEEEEEEESCHH--------HHHHHHHHH------TCEEEEEE-GGGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSC
T ss_pred CceEEEEEcCCHH--------HHHHHHHhC------CCEEEEec-CCccEEEEEeCHHHHHHHHhcCCCCcEEEecceec
Confidence 3467999887633 234444443 45788888 56999999999999999999 99999999998887
Q ss_pred cccCC-------------Ccccccccc--ccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccc
Q 044745 128 LHTTR-------------SWDFMGLNQ--SITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFT 192 (753)
Q Consensus 128 ~~~~~-------------s~~~~g~~~--~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~ 192 (753)
+.... .|.+..+.. .+|..+.+|+||+|||||||||++||+|.+.- |.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~-------- 172 (471)
T 3t41_A 108 ITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STDS-------- 172 (471)
T ss_dssp BCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC--------
T ss_pred cccccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC--------
Confidence 65432 233333322 58999999999999999999999999998641 1110
Q ss_pred cCcceeeeeecCCC----CCCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCCH
Q 044745 193 CNNKIIGARYYTTD----DISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCAE 268 (753)
Q Consensus 193 ~n~kl~g~~~~~g~----~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~ 268 (753)
..++....|.+. ..+...+.|+.||||||||||+|++. +.||||+|+|+.+|++++ .++..
T Consensus 173 --~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~~-~~~~~ 237 (471)
T 3t41_A 173 --KNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTMYRVFGS-KKTEL 237 (471)
T ss_dssp --EECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEEECCSS-SCCCH
T ss_pred --cccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeEEEEEeccC-CCCcH
Confidence 011111112111 11224567899999999999998641 389999999999999988 67899
Q ss_pred HHHHHHHHHHHHCCCcEEEeecCCCCCCC------------CcccHHHHHHHHHhhCCcEEEEecCCCCCCCCC------
Q 044745 269 TAILGAFDDAIADGVDIITISLGGQNTLN------------FTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGS------ 330 (753)
Q Consensus 269 ~~i~~ai~~a~~~gvdVIn~SlG~~~~~~------------~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~------ 330 (753)
+++++||+||++++++|||||||...... ...+.+..++..+.++|++||+||||+|.....
T Consensus 238 ~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~ 317 (471)
T 3t41_A 238 LWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKL 317 (471)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCccccccc
Confidence 99999999999999999999999731111 224567888888999999999999999986532
Q ss_pred ------------ccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCc
Q 044745 331 ------------TVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLC 398 (753)
Q Consensus 331 ------------~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C 398 (753)
.+...|++|+|||++.+
T Consensus 318 ~~~~~~~~~~~~~Pa~~~~vitVgA~~~~--------------------------------------------------- 346 (471)
T 3t41_A 318 QREYQGNGEVKDVPASMDNVVTVGSTDQK--------------------------------------------------- 346 (471)
T ss_dssp TTTCCSSSEEEEETTTSTTEEEEEEECTT---------------------------------------------------
T ss_pred ccccccCCceeeccccCCCeEEEEeeCCC---------------------------------------------------
Confidence 55677899999986432
Q ss_pred CCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEE
Q 044745 399 TDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANI 478 (753)
Q Consensus 399 ~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i 478 (753)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCcc----------------------EEeccCCCCCCCCCCCCc
Q 044745 479 LSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVD----------------------ILAAFSPLGAVSDDPEDK 536 (753)
Q Consensus 479 ~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~ 536 (753)
+.++.||++||+. |||+|||++ |+++++.+
T Consensus 347 -----------~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~---------- 398 (471)
T 3t41_A 347 -----------SNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG---------- 398 (471)
T ss_dssp -----------SSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS----------
T ss_pred -----------CCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC----------
Confidence 4678899999963 599999987 88888664
Q ss_pred ccccceeeccccchhHHHHHHHHHHHhhCC-CCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCCCC
Q 044745 537 RQAKFNVVSGTSMSCPHAAGVAAYVKSFHP-DWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVNPG 610 (753)
Q Consensus 537 ~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~g 610 (753)
.|..++|||||||||||++|||+|++| .|+|++||++|++||.+.... .+..||+|+||+.+|++..
T Consensus 399 ---~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~~----~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 399 ---RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNNK----PFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp ---SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSCC----CHHHHTTCBBCHHHHTTTT
T ss_pred ---CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCC----CcCccccChhCHHHHHHHH
Confidence 699999999999999999999999999 899999999999999987662 3689999999999999853
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=4e-58 Score=526.86 Aligned_cols=335 Identities=19% Similarity=0.213 Sum_probs=60.2
Q ss_pred cCceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceecc
Q 044745 49 FLMVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTDHERQKLASMEGVVSVFPSRTLQL 128 (753)
Q Consensus 49 ~~~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 128 (753)
.+++|||+||+... ......+.+.+.....+.....++++.|++.|+||+++++.+++++|+++|+|++||+++.+..
T Consensus 74 ipg~YIV~lk~~~~--~~~~~~~~~~l~a~~~~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~ 151 (692)
T 2p4e_P 74 LPGTYVVVLKEETH--LSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 151 (692)
T ss_dssp EEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCCcEEEEECCCCC--HHHHHHHHHHHHHHHhhcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEecccccc
Confidence 46799999998775 2233333344443332233456899999999999999999999999999999999999998865
Q ss_pred ccCCCcccccccc-----ccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeec
Q 044745 129 HTTRSWDFMGLNQ-----SITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYY 203 (753)
Q Consensus 129 ~~~~s~~~~g~~~-----~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~ 203 (753)
+ ...|.+-.+.. ..|..+.+|+||+|||||||||++||+|.++.. |.+ | ..+
T Consensus 152 ~-~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~~-------~---------~~~ 208 (692)
T 2p4e_P 152 Q-SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VTD-------F---------ENV 208 (692)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ecc-------c---------ccc
Confidence 2 23344333321 368888999999999999999999999986411 100 0 001
Q ss_pred CCCC--CCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHH
Q 044745 204 TTDD--ISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIA 280 (753)
Q Consensus 204 ~g~~--~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~ 280 (753)
.+.+ .....+.|++||||||||||+|+. .||||+|+|+.+|++++ .| ++.+++++||+|+++
T Consensus 209 ~d~dg~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~-~G~g~~s~ii~aI~~a~~ 273 (692)
T 2p4e_P 209 PEEDGTRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNC-QGKGTVSGTLIGLEFIRK 273 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecC-CCCCCHHHHHHHHHHHHh
Confidence 0000 001346789999999999999874 79999999999999987 55 788899999999998
Q ss_pred C------CCcEEEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCC-ccCCCCceEEeecccCccceeee
Q 044745 281 D------GVDIITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGS-TVSVAPWLMSVAASNTDRLFVDK 353 (753)
Q Consensus 281 ~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVga~~~~~~~~~~ 353 (753)
+ +++|||||||+. ....+..++.++.++|++||+||||+|.+... .+...|++|+|||++.+...
T Consensus 274 ~~~~~~~g~~VINmSlGg~-----~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~--- 345 (692)
T 2p4e_P 274 SQLVQPVGPLVVLLPLAGG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhcccCCceEEEecCCCC-----CcHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc---
Confidence 6 899999999976 23456667778899999999999999986543 36678999999997643100
Q ss_pred EEeCCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceE
Q 044745 354 VVLGSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEG 433 (753)
Q Consensus 354 ~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g 433 (753)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCcee
Q 044745 434 SVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDIS 513 (753)
Q Consensus 434 ~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~ 513 (753)
...-+.||+|||. |||+
T Consensus 346 -------------------------------------------------------a~~ss~fSn~G~~--------vDI~ 362 (692)
T 2p4e_P 346 -------------------------------------------------------VTLGTLGTNFGRC--------VDLF 362 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------cccccccCCCCCc--------eeEE
Confidence 0001238999984 5999
Q ss_pred eCCccEEeccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCC
Q 044745 514 APGVDILAAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMN 585 (753)
Q Consensus 514 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~ 585 (753)
|||++|+++++... ..|..++|||||||||||++|||++++|+|+|+|||++|++||.+..
T Consensus 363 APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 363 APGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp ------------------------------------------------------------------------
T ss_pred ecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 99999999987642 46899999999999999999999999999999999999999997643
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.4e-54 Score=500.82 Aligned_cols=369 Identities=22% Similarity=0.261 Sum_probs=275.0
Q ss_pred ccCceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCH----HHHHHhhc--CCCeEEEE
Q 044745 48 NFLMVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTD----HERQKLAS--MEGVVSVF 121 (753)
Q Consensus 48 ~~~~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~----~~~~~L~~--~p~V~~v~ 121 (753)
..+++|||+|++... .+++++.+ +.++.+.+ ..+++++++++. +.+++|++ +|+|++||
T Consensus 29 ~~~~~~IV~~k~~~~--------~~~~~~~~------g~~v~~~~-~~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~ve 93 (671)
T 1r6v_A 29 YTEGKILVGYNDRSE--------VDKIVKAV------NGKVVLEL-PQIKVVSIKLNGMTVKQAYDKIKALALKGIRYVE 93 (671)
T ss_dssp BCTTEEEEEESSHHH--------HHHHHHHH------TCEEEEEE-GGGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEE
T ss_pred cCCccEEEEECCCcC--------HHHHHHhc------CCeEEEEc-CCCcEEEEEeCCcCHHHHHHHHHhccCCCceEEe
Confidence 357999999997532 23344433 34677777 678999999864 34566764 89999999
Q ss_pred eCceecccc----C--------------------------CCcc--cccccccc-ccCCCCCCCcEEEEEecCCCCCCCC
Q 044745 122 PSRTLQLHT----T--------------------------RSWD--FMGLNQSI-TRKRSVESDIIVGVIDSGIWPESES 168 (753)
Q Consensus 122 ~~~~~~~~~----~--------------------------~s~~--~~g~~~~~-~~~~~~G~GV~VaVIDtGid~~Hp~ 168 (753)
|+..+++.. . ..|. .++++ .+ |+. .+|+||+|||||||||++||+
T Consensus 94 pd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~-~a~w~~-~tG~gV~VAVIDTGVd~~Hpd 171 (671)
T 1r6v_A 94 PSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVT-QQLWEE-ASGTNIIVAVVDTGVDGTHPD 171 (671)
T ss_dssp CCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCC-HHHHHH-CSCTTCEEEEEESCCBTTSGG
T ss_pred cCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCc-hhhhhc-cCCCCCEEEEEeCCCCCCCcc
Confidence 997654321 0 0111 13333 56 888 899999999999999999999
Q ss_pred ccCCCCCCCCccccccccCCCccccCcceeeeeecCCCC-CCCCCCCCCCCCcchhhcccccCcccccccccccccceee
Q 044745 169 FSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDD-ISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARG 247 (753)
Q Consensus 169 f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~-~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~G 247 (753)
|.++ .+. +...+.+.. ....+..|.+||||||||||||..+ + .| +.|
T Consensus 172 L~~~-------~~~----------------g~~~~~~~~~p~~~d~~d~~gHGThVAGiIAa~~n-g---~g-----v~G 219 (671)
T 1r6v_A 172 LEGQ-------VIA----------------GYRPAFDEELPAGTDSSYGGSAGTHVAGTIAAKKD-G---KG-----IVG 219 (671)
T ss_dssp GTTT-------BCC----------------EEEGGGTEEECTTCBCCTTCSHHHHHHHHHHCCCS-S---SS-----CCC
T ss_pred cccc-------EEe----------------cccccCCCcCCCCCCCccCCCcchhhhhhhhccCC-C---Cc-----eEE
Confidence 9864 111 111111110 0112345678999999999999741 1 12 389
Q ss_pred cccccceeccccccC-----CCC-CCHHHHHHHHHHHHHCCCcEEEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEec
Q 044745 248 GVPSARIAAYKVCSP-----ELG-CAETAILGAFDDAIADGVDIITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSA 321 (753)
Q Consensus 248 vAP~A~l~~~kv~~~-----~~g-~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AA 321 (753)
|||+|+|+.+|+++. ..+ ...+.+++||+||+++|++|||||||+.. ....+..++.+|.++|++||+||
T Consensus 220 VAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~----~s~~l~~Ai~~A~~~GvlvVaAA 295 (671)
T 1r6v_A 220 VAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG----YSYTMKEAFDYAMEHGVVMVVSA 295 (671)
T ss_dssp SCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEEC
T ss_pred ECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC----CCHHHHHHHHHHHhCCCEEEEeC
Confidence 999999999999875 123 45677999999999999999999999862 24577888889999999999999
Q ss_pred CCCCCCC-CCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCC
Q 044745 322 GNSGPFI-GSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTD 400 (753)
Q Consensus 322 GN~G~~~-~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~ 400 (753)
||+|... ..++...|++|+|||++.+.
T Consensus 296 GN~g~~~~~~yPA~~~~VItVgA~d~~g---------------------------------------------------- 323 (671)
T 1r6v_A 296 GNNTSDSHHQYPAGYPGVIQVAALDYYG---------------------------------------------------- 323 (671)
T ss_dssp CSCSSSCCCCBTTTSTTCEEEEEEEEET----------------------------------------------------
T ss_pred CCCCCCCCccCcccCCCeEEEEEEcCCC----------------------------------------------------
Confidence 9999865 45667889999999865331
Q ss_pred CCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEcc
Q 044745 401 GQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILS 480 (753)
Q Consensus 401 ~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~ 480 (753)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCC-----CCCcccccceeeccccchhHHHH
Q 044745 481 TEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDD-----PEDKRQAKFNVVSGTSMSCPHAA 555 (753)
Q Consensus 481 ~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~-----~~~~~~~~y~~~sGTSmAaP~VA 555 (753)
....++.||++||.. ||+|||++|+++++........ ......+.|..++||||||||||
T Consensus 324 -------~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VA 388 (671)
T 1r6v_A 324 -------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVT 388 (671)
T ss_dssp -------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHH
T ss_pred -------CceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHH
Confidence 002378899999976 9999999999998764211000 00112347999999999999999
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCCCCeeeeCChhh
Q 044745 556 GVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVNPGLVYETFEQD 619 (753)
Q Consensus 556 G~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~glv~~~~~~~ 619 (753)
|++|||+|++|+|++++||++|++||+++...+. +..+|+|+||+.+|++..|..+....+
T Consensus 389 GvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g~---d~~~G~G~vna~~Al~~~l~~~~~~~~ 449 (671)
T 1r6v_A 389 GVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGW---DHDTGYGLVKLDAALQGPLPTQGGVEE 449 (671)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSSC---BTTTBTCBCCHHHHHHCCCCSSSEEEE
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCCC---CCCcccceeCHHHHhhhhcCCCCCccc
Confidence 9999999999999999999999999998876542 678999999999999987776554433
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=3.7e-54 Score=483.19 Aligned_cols=378 Identities=22% Similarity=0.284 Sum_probs=273.5
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
++++ .+|..+ |+||+|||||||||++||+|.+. ++..+++.+. .+...+.|+
T Consensus 11 i~~~-~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~------------------------~~~~~~~~~~-~~~~~~~d~ 62 (441)
T 1y9z_A 11 VGAT-VLSDSQ--AGNRTICIIDSGYDRSHNDLNAN------------------------NVTGTNNSGT-GNWYQPGNN 62 (441)
T ss_dssp TTCS-SSCCTT--GGGCEEEEEESCCCTTSTTTTTS------------------------EEEECCCTTS-CCTTCCCSS
T ss_pred cChh-hhhhcC--CCCcEEEEEcCCCCCCChhHhcC------------------------cccCcccCCC-CCCCCCCCC
Confidence 4555 889865 77999999999999999999853 1112222111 112356788
Q ss_pred CCCcchhhcccccCcccccccccccccceeeccccc--ceeccccccCCCC-CCHHHHHHHHHHHHHC-CCcEEEeecCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSA--RIAAYKVCSPELG-CAETAILGAFDDAIAD-GVDIITISLGG 292 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~-gvdVIn~SlG~ 292 (753)
.||||||||||+|..+. .| +.||||+| +|+.+|+++. .| +..+++++||+||+++ |++|||||||.
T Consensus 63 ~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~-~g~~~~~~~~~ai~~a~~~~g~~Vin~S~G~ 132 (441)
T 1y9z_A 63 NAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNE-AGWGYSSSLVAAIDTCVNSGGANVVTMSLGG 132 (441)
T ss_dssp CCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEET-TEECCSSCHHHHHHHHHHTTCCSEEEECCCB
T ss_pred CCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCC-CCCcCHHHHHHHHHHHHHhcCCcEEEeCCCC
Confidence 99999999999997521 12 49999995 8999999988 56 7888999999999999 99999999998
Q ss_pred CCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeC---------------
Q 044745 293 QNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLG--------------- 357 (753)
Q Consensus 293 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~--------------- 357 (753)
... ...+..++.++.++|++||+||||+|.....++...|++|+|||++.+.....+...+
T Consensus 133 ~~~----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i~s~ 208 (441)
T 1y9z_A 133 SGS----TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILST 208 (441)
T ss_dssp SCC----BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSEEEE
T ss_pred CCC----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCeecc
Confidence 722 3456778888999999999999999988777888899999999998775433222222
Q ss_pred ----CCe----EEeeEEeccCCCC--Cceee--EEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeec-----
Q 044745 358 ----SGQ----TLVGYSINSFSSK--GKTFP--LVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSF----- 420 (753)
Q Consensus 358 ----~~~----~~~g~s~~~~~~~--~~~~~--lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~----- 420 (753)
++. .+.|.+++..... ...++ +.|...... .........|......+++.+++|||++|+|.
T Consensus 209 ~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~-g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg~~~~~ 287 (441)
T 1y9z_A 209 VTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPIN-ASATGALAECTVNGTSFSCGNMANKICLVERVGNQGS 287 (441)
T ss_dssp CSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCC-CEEEEEEEEEEEETTEEECCCCTTEEEEEECCSCSSS
T ss_pred ccCCCcccceeecccccccccccCcccccccCCccccccccc-cccccchhccccccccccCCCccccEEEEeccccCcc
Confidence 111 2223333221100 00000 111110000 00011224576533466788999999999883
Q ss_pred -----chhHHHHhcCceEEEEeccCCcc-cc--------cccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecC
Q 044745 421 -----DGFNEVHKAGAEGSVSLNDVEFN-KV--------SSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKD 486 (753)
Q Consensus 421 -----~k~~~~~~~Ga~g~i~~~~~~~~-~~--------~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~ 486 (753)
+|..+++++|+.|+| ++++... +. ...+.+|.+.++..+|+.|+.|+.+. +
T Consensus 288 ~~~~~~~~~~~~~aGa~gvi-i~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~---------- 352 (441)
T 1y9z_A 288 SYPEINSTKACKTAGAKGII-VYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----T---------- 352 (441)
T ss_dssp SCTHHHHHHHHHHTTCSEEE-EECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----E----------
T ss_pred cccHHHHHHHHHhcCCeEEE-EEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----c----------
Confidence 578899999999999 8887542 11 34567999999999999998876321 0
Q ss_pred CCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCC
Q 044745 487 SEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHP 566 (753)
Q Consensus 487 ~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P 566 (753)
.+ ++.. ...|..+||||||||||||++|||+|+||
T Consensus 353 ------------------------t~--------~~~~-------------~~~y~~~sGTSmAaP~VAG~aALl~~~~p 387 (441)
T 1y9z_A 353 ------------------------TV--------SNQG-------------NQDYEYYNGTSMATPHVSGVATLVWSYHP 387 (441)
T ss_dssp ------------------------EE--------EEEE-------------EESEEEECSHHHHHHHHHHHHHHHHHHCT
T ss_pred ------------------------cc--------cccc-------------CCCceeecccccCCcccchHHHHHHHHCC
Confidence 11 1111 14799999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCCCCeeeeCChhhHHHHHhcCCCCc
Q 044745 567 DWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVNPGLVYETFEQDYIIMLCSMGYDE 631 (753)
Q Consensus 567 ~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~glv~~~~~~~~~~~lc~~~~~~ 631 (753)
+|+|++||++||+||++++..+. +.+||+|+||+.+|+ ||+.|||.+++.+
T Consensus 388 ~~sp~~ik~~L~~TA~~~~~~g~---~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~~ 438 (441)
T 1y9z_A 388 ECSASQVRAALNATADDLSVAGR---DNQTGYGMINAVAAK-----------AYLDESCTGPTDP 438 (441)
T ss_dssp TSCHHHHHHHHHHHSBCCSSSSC---BTTTBTCBCCHHHHH-----------HHHHHCTTCC---
T ss_pred CCCHHHHHHHHHhhchhhccCCC---cccccccccCHHHHH-----------HHHHhhhcCCCCC
Confidence 99999999999999999877653 678999999999995 5999999988643
No 10
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.3e-53 Score=465.54 Aligned_cols=302 Identities=20% Similarity=0.216 Sum_probs=203.7
Q ss_pred ccccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccc--cCccee----eeeec-CC---
Q 044745 136 FMGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFT--CNNKII----GARYY-TT--- 205 (753)
Q Consensus 136 ~~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~--~n~kl~----g~~~~-~g--- 205 (753)
..|++ ++|..+..|+||+|||||||||++||+|++....+....|...++...... .+..+. ....+ ..
T Consensus 17 ipG~~-~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (357)
T 4h6x_A 17 IPGLA-DLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEA 95 (357)
T ss_dssp STTHH-HHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHH
T ss_pred ccCHH-HHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcccccccccccccc
Confidence 45777 899999999999999999999999999998766666667776555432110 000000 00000 00
Q ss_pred CCCCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-----CCHHHHHHHHHHHHH
Q 044745 206 DDISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-----CAETAILGAFDDAIA 280 (753)
Q Consensus 206 ~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-----~~~~~i~~ai~~a~~ 280 (753)
...+..++.|.+||||||||||+|+.. ..+.||||+|+|+.+|++....+ +...+++++|+||++
T Consensus 96 ~~~~~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~ 165 (357)
T 4h6x_A 96 VIPDTKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALE 165 (357)
T ss_dssp HCTTTHHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHH
T ss_pred ccCCCCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHH
Confidence 001123456788999999999999742 12489999999999999754211 344578899999999
Q ss_pred CCCcEEEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeCCCe
Q 044745 281 DGVDIITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQ 360 (753)
Q Consensus 281 ~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~ 360 (753)
.|++|||||||.........+.+..++.++.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 166 ~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------- 232 (357)
T 4h6x_A 166 LGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD------------- 232 (357)
T ss_dssp TTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT-------------
T ss_pred cCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC-------------
Confidence 9999999999987545556778888999999999999999999998877788888999999986532
Q ss_pred EEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccC
Q 044745 361 TLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDV 440 (753)
Q Consensus 361 ~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~ 440 (753)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEE
Q 044745 441 EFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDIL 520 (753)
Q Consensus 441 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~ 520 (753)
+.++.|||||+.. .||||+|||++|+
T Consensus 233 -------------------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i~ 258 (357)
T 4h6x_A 233 -------------------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEIL 258 (357)
T ss_dssp -------------------------------------------------SSBCTTCC---CT-----TTTEEEEECSSEE
T ss_pred -------------------------------------------------CcccccccCCCCC-----CccceeecCCCeE
Confidence 5678899999753 5899999999999
Q ss_pred eccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCCCCCCCCCCCCCCcc
Q 044745 521 AAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSF----HPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAF 596 (753)
Q Consensus 521 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~ 596 (753)
++++.+ ..|..++|||||||||||++|||+++ +|.|+++|||++|++||++++..... .+.+|
T Consensus 259 s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~~~-~~~~~ 325 (357)
T 4h6x_A 259 GAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEVVE-EPERC 325 (357)
T ss_dssp ECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------------C
T ss_pred eccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCCCC-Ccccc
Confidence 998775 36788999999999999999999964 57899999999999999988654322 36789
Q ss_pred CCCCCCccccCC
Q 044745 597 GSGHINPVEAVN 608 (753)
Q Consensus 597 G~G~in~~~Al~ 608 (753)
|+|+||+.+|++
T Consensus 326 G~G~vn~~~A~~ 337 (357)
T 4h6x_A 326 LRGFVNIPGAMK 337 (357)
T ss_dssp TTCBCCHHHHHH
T ss_pred eeEEecHHHHHH
Confidence 999999999987
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.4e-51 Score=434.38 Aligned_cols=261 Identities=28% Similarity=0.352 Sum_probs=215.3
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
++++ .+|+.+..|+||+|||||||||++||+|.++ ++..++|.++. .++.|.
T Consensus 18 i~~~-~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~------------------------~~~~~~~~~~~---~~~~d~ 69 (280)
T 1dbi_A 18 TYTD-YAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK------------------------VIKGYDFVDND---YDPMDL 69 (280)
T ss_dssp GTHH-HHTTTCCCCTTCEEEEEESCCCTTSTTTTTT------------------------EEEEEETTTTB---SCCCCS
T ss_pred cCcH-HHHhhcCCCCCCEEEEEeCCcCCCChhhccC------------------------cccceeccCCC---CCCCCC
Confidence 4445 8999998888999999999999999999843 44555663321 346789
Q ss_pred CCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCCCcEEEeecCCCCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADGVDIITISLGGQNT 295 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~ 295 (753)
.+|||||||||+|...++. | +.||||+|+|+.+|+++. .+ +..+++++||+||+++|++|||||||...
T Consensus 70 ~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~kv~~~-~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~- 139 (280)
T 1dbi_A 70 NNHGTHVAGIAAAETNNAT---G-----IAGMAPNTRILAVRALDR-NGSGTLSDIADAIIYAADSGAEVINLSLGCDC- 139 (280)
T ss_dssp SSHHHHHHHHHHCCCSSSS---S-----CCCSSSSCEEEEEECCCT-TSCCCHHHHHHHHHHHHHTTCSEEEECCSSCC-
T ss_pred CCcHHHHHHHHhCcCCCCC---c-----ceEeCCCCEEEEEEEECC-CCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCC-
Confidence 9999999999999854321 2 389999999999999987 55 78899999999999999999999999872
Q ss_pred CCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCc
Q 044745 296 LNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGK 375 (753)
Q Consensus 296 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 375 (753)
....+..++.++.++|++||+||||+|......+...|++|+|||++.+
T Consensus 140 ---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------------- 188 (280)
T 1dbi_A 140 ---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY---------------------------- 188 (280)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT----------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC----------------------------
Confidence 2356788888899999999999999998776777888999999986432
Q ss_pred eeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEE
Q 044745 376 TFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVA 455 (753)
Q Consensus 376 ~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~ 455 (753)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCC
Q 044745 456 LNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPED 535 (753)
Q Consensus 456 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 535 (753)
+.++.||++||.. ||+|||++|+++++.+
T Consensus 189 ----------------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~~--------- 217 (280)
T 1dbi_A 189 ----------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITGN--------- 217 (280)
T ss_dssp ----------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETTT---------
T ss_pred ----------------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecCCC---------
Confidence 4578899999865 9999999999998753
Q ss_pred cccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCC
Q 044745 536 KRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVN 608 (753)
Q Consensus 536 ~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 608 (753)
.|..++|||||||||||++|||++ |++++++||++|++||+++... ...||+|+||+.+|++
T Consensus 218 ----~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~-----~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 218 ----RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT-----GTYFKYGRINSYNAVT 279 (280)
T ss_dssp ----EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB-----TTTBSSEECCHHHHHT
T ss_pred ----CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC-----CCcccCCEECHHHHhc
Confidence 799999999999999999999987 8999999999999999998754 4679999999999986
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=7.1e-52 Score=435.57 Aligned_cols=259 Identities=28% Similarity=0.441 Sum_probs=218.3
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
++++ .+|..+++|+||+|+|||||||++||+|+ +...++|.... ..+.|.
T Consensus 11 i~~~-~~~~~g~~G~gv~VaViDtGid~~h~~l~--------------------------~~~g~~~~~~~---~~~~d~ 60 (274)
T 1r0r_E 11 IKAD-KVQAQGFKGANVKVAVLDTGIQASHPDLN--------------------------VVGGASFVAGE---AYNTDG 60 (274)
T ss_dssp TTHH-HHHHHTCSCTTCEEEEEESCCCTTCTTCC--------------------------EEEEEECSTTC---CTTCCS
T ss_pred cCCH-HHHhcCCCCCCCEEEEEcCCCCCCCHhHc--------------------------CCCCccccCCC---CCCCCC
Confidence 4555 89999999999999999999999999995 12233442211 235688
Q ss_pred CCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCCCcEEEeecCCCCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADGVDIITISLGGQNT 295 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~ 295 (753)
.||||||||||+|..+ ...+.||||+|+|+.+|+++. .+ +..++++++|+|+++++++|||||||...
T Consensus 61 ~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~~v~~~-~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~- 129 (274)
T 1r0r_E 61 NGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNS-SGSGSYSGIVSGIEWATTNGMDVINMSLGGAS- 129 (274)
T ss_dssp SSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCT-TSEECHHHHHHHHHHHHHTTCSEEEECEEBSS-
T ss_pred CCCHHHHHHHHHccCC---------CCceEEECCCCEEEEEEEECC-CCCccHHHHHHHHHHHHHcCCCEEEeCCCCCC-
Confidence 9999999999999731 112389999999999999987 55 78889999999999999999999999873
Q ss_pred CCCcccHHHHHHHHHhhCCcEEEEecCCCCCCC----CCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCC
Q 044745 296 LNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFI----GSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFS 371 (753)
Q Consensus 296 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 371 (753)
....+..+++++.++|++||+||||+|... ..++...|++|+||+++.+
T Consensus 130 ---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~------------------------ 182 (274)
T 1r0r_E 130 ---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN------------------------ 182 (274)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT------------------------
T ss_pred ---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC------------------------
Confidence 245778888899999999999999999763 3445677899999986422
Q ss_pred CCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccc
Q 044745 372 SKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSL 451 (753)
Q Consensus 372 ~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~ 451 (753)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCC
Q 044745 452 PAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSD 531 (753)
Q Consensus 452 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~ 531 (753)
+.++.||++||.. ||+|||.+|+++++.+
T Consensus 183 --------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~----- 211 (274)
T 1r0r_E 183 --------------------------------------SNRASFSSVGAEL--------EVMAPGAGVYSTYPTN----- 211 (274)
T ss_dssp --------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETTT-----
T ss_pred --------------------------------------CCcCccCCCCCCc--------eEEeCCCCeEeecCCC-----
Confidence 4578899999954 9999999999998764
Q ss_pred CCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCC
Q 044745 532 DPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVN 608 (753)
Q Consensus 532 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 608 (753)
.|..++|||||||||||++|||+|++|+|+++|||++|++||+++.. +..||+|+||+.+|++
T Consensus 212 --------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g~------~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 212 --------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLGS------SFYYGKGLINVEAAAQ 274 (274)
T ss_dssp --------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCSC------HHHHTTCBCCHHHHTC
T ss_pred --------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccCC------CCCcccCccCHHHHhC
Confidence 69999999999999999999999999999999999999999998852 6789999999999985
No 13
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.2e-51 Score=432.28 Aligned_cols=258 Identities=29% Similarity=0.417 Sum_probs=220.1
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
++++ .+|..+++|+||+|+|||||| .+||+|+ +...++|... ...+.|.
T Consensus 11 i~~~-~a~~~g~~G~gv~VaViDtGi-~~h~~l~--------------------------~~~~~~~~~~---~~~~~d~ 59 (269)
T 1gci_A 11 VQAP-AAHNRGLTGSGVKVAVLDTGI-STHPDLN--------------------------IRGGASFVPG---EPSTQDG 59 (269)
T ss_dssp TTHH-HHHHTTCSCTTCEEEEEESCC-CCCTTCC--------------------------EEEEEECSTT---CCSCSCS
T ss_pred cCcH-HHHhcCCCCCCCEEEEECCCC-CCCHhhc--------------------------ccCCcccCCC---CCCCCCC
Confidence 4455 899999999999999999999 8999995 1233344221 1335789
Q ss_pred CCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCCCcEEEeecCCCCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADGVDIITISLGGQNT 295 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~ 295 (753)
.||||||||||+|..+ ...+.||||+|+|+.+|+++. .+ +..+++++||+|+++++++|||||||...
T Consensus 60 ~gHGT~vAgiia~~~~---------~~~~~GvAp~a~l~~~~v~~~-~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~~- 128 (269)
T 1gci_A 60 NGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGA-SGSGSVSSIAQGLEWAGNNGMHVANLSLGSPS- 128 (269)
T ss_dssp SSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCT-TSCBCHHHHHHHHHHHHHTTCSEEEECCCBSS-
T ss_pred CCChHHHHHHHhcCcC---------CCCcEEeCCCCEEEEEEeECC-CCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCC-
Confidence 9999999999999731 112389999999999999987 44 78889999999999999999999999873
Q ss_pred CCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCc
Q 044745 296 LNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGK 375 (753)
Q Consensus 296 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 375 (753)
....+..+++++.++|++||+||||+|.....++...|++|+||+++.+
T Consensus 129 ---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------------- 177 (269)
T 1gci_A 129 ---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN---------------------------- 177 (269)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT----------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC----------------------------
Confidence 2356788888899999999999999998877778888999999986432
Q ss_pred eeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEE
Q 044745 376 TFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVA 455 (753)
Q Consensus 376 ~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~ 455 (753)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCC
Q 044745 456 LNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPED 535 (753)
Q Consensus 456 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 535 (753)
+.++.||++||.. ||+|||++|+++++.+
T Consensus 178 ----------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~--------- 206 (269)
T 1gci_A 178 ----------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPGS--------- 206 (269)
T ss_dssp ----------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETTT---------
T ss_pred ----------------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecCCC---------
Confidence 4578899999975 9999999999998763
Q ss_pred cccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCC
Q 044745 536 KRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVN 608 (753)
Q Consensus 536 ~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 608 (753)
.|..++|||||||||||++|||+|++|+|++.|||++|++||+++.. +..||+|+||+.+|++
T Consensus 207 ----~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g~------~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 207 ----TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLGS------TNLYGSGLVNAEAATR 269 (269)
T ss_dssp ----EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCSC------HHHHTTCBCCHHHHTC
T ss_pred ----CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCC------CCCcccCccCHHHHcC
Confidence 78999999999999999999999999999999999999999998852 6789999999999985
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2.4e-51 Score=432.95 Aligned_cols=261 Identities=31% Similarity=0.439 Sum_probs=218.9
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
++++ .+|..+++|+||+|||||||||++||+|+. ...++|.... .....|.
T Consensus 11 i~~~-~~~~~g~~G~gv~VaViDtGid~~h~~l~~--------------------------~~g~~~~~~~--~~~~~d~ 61 (281)
T 1to2_E 11 IKAP-ALHSQGYTGSNVKVAVIDSGIDSSHPDLKV--------------------------AGGASMVPSE--TNPFQDN 61 (281)
T ss_dssp TTHH-HHHHHTCSCTTCEEEEEESCCCTTCTTCCE--------------------------EEEEECCTTC--CCTTCCS
T ss_pred cChH-HHHhcCCCCCCCEEEEEcCCCCCCCHHHcC--------------------------cCCccccCCC--CCCCCCC
Confidence 4455 899999999999999999999999999952 1233342111 1223688
Q ss_pred CCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCCCcEEEeecCCCCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADGVDIITISLGGQNT 295 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~ 295 (753)
.+|||||||||+|..+ ...+.||||+|+|+.+|+++. .+ +..++++++|+|+++++++|||||||...
T Consensus 62 ~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~-~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~- 130 (281)
T 1to2_E 62 NSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGA-DGSGQYSWIINGIEWAIANNMDVINMSLGGPS- 130 (281)
T ss_dssp SSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCT-TSEECHHHHHHHHHHHHHTTCSEEEECEEBSC-
T ss_pred CCcHHHHHHHHhccCC---------CCcceeeCCCCEEEEEEEeCC-CCCccHHHHHHHHHHHHHCCCcEEEECCcCCC-
Confidence 9999999999999731 112389999999999999987 55 78899999999999999999999999873
Q ss_pred CCCcccHHHHHHHHHhhCCcEEEEecCCCCCCC----CCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCC
Q 044745 296 LNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFI----GSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFS 371 (753)
Q Consensus 296 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 371 (753)
....+..+++++.++|++||+||||+|... ..++...|++|+|||++.+
T Consensus 131 ---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~------------------------ 183 (281)
T 1to2_E 131 ---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS------------------------ 183 (281)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC------------------------
Confidence 245778888899999999999999999763 3456677899999985422
Q ss_pred CCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccc
Q 044745 372 SKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSL 451 (753)
Q Consensus 372 ~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~ 451 (753)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCC
Q 044745 452 PAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSD 531 (753)
Q Consensus 452 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~ 531 (753)
+.++.||++||.. ||+|||++|+++++.+
T Consensus 184 --------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~~~~~----- 212 (281)
T 1to2_E 184 --------------------------------------NQRASFSSVGPEL--------DVMAPGVSIQSTLPGN----- 212 (281)
T ss_dssp --------------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEEETTT-----
T ss_pred --------------------------------------CCcCCcCCCCCCc--------eEEecCCCeEeecCCC-----
Confidence 4578899999965 9999999999998764
Q ss_pred CCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCCC
Q 044745 532 DPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVNP 609 (753)
Q Consensus 532 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~ 609 (753)
.|..++|||||||||||++|||+|++|+|+++|||++|++||+++.. +..||+|+||+.+|+++
T Consensus 213 --------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g~------~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 213 --------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGD------SFYYGKGLINVQAAAQH 276 (281)
T ss_dssp --------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCSC------HHHHTTCBCCHHHHTSS
T ss_pred --------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCC------CCCcccceecHHHHhhh
Confidence 68999999999999999999999999999999999999999998852 68899999999999985
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.9e-51 Score=442.77 Aligned_cols=265 Identities=27% Similarity=0.342 Sum_probs=217.0
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCC-CCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTD-DISGNTARD 215 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~-~~~~~~~~D 215 (753)
++++ .+|..+++|+||+|||||||||++||+|.++ ++..++|..+ ..+.....|
T Consensus 28 i~~~-~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~------------------------~~~~~~~~~~~~~~~~~~~d 82 (327)
T 2x8j_A 28 VEAP-AVWRASAKGAGQIIGVIDTGCQVDHPDLAER------------------------IIGGVNLTTDYGGDETNFSD 82 (327)
T ss_dssp TTHH-HHHHHHGGGTTCEEEEEESCCCTTCTTTGGG------------------------EEEEEECSSGGGGCTTCCCC
T ss_pred cChH-HHHhcCCCCCCCEEEEEcCCCCCCChhHhhc------------------------ccCCccccCCCCCCCCCCCC
Confidence 4555 8999999999999999999999999999843 4445555322 111234578
Q ss_pred CCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHH------CCCcEEEe
Q 044745 216 IQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIA------DGVDIITI 288 (753)
Q Consensus 216 ~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~------~gvdVIn~ 288 (753)
+.||||||||||+|..+ ...+.||||+|+|+.+|+++. .| +..+++++||+||++ .+++||||
T Consensus 83 ~~gHGT~VAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~-~g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin~ 152 (327)
T 2x8j_A 83 NNGHGTHVAGTVAAAET---------GSGVVGVAPKADLFIIKALSG-DGSGEMGWIAKAIRYAVDWRGPKGEQMRIITM 152 (327)
T ss_dssp SSSHHHHHHHHHHCCCC---------SSBCCCSSTTCEEEEEECSCT-TSEECHHHHHHHHHHHHHCCCTTSCCCSEEEE
T ss_pred CCCchHHHHHHHhccCC---------CCCcEeeCCCCEEEEEEeECC-CCCcCHHHHHHHHHHHHhhcccccCCceEEEE
Confidence 99999999999999842 112399999999999999987 55 788999999999999 89999999
Q ss_pred ecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCC-----CCccCCCCceEEeecccCccceeeeEEeCCCeEEe
Q 044745 289 SLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFI-----GSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLV 363 (753)
Q Consensus 289 SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~ 363 (753)
|||... ....+..++.++.++|++||+||||+|... ..++...|++|+|||++.+
T Consensus 153 S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~---------------- 212 (327)
T 2x8j_A 153 SLGGPT----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD---------------- 212 (327)
T ss_dssp CEEBSC----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT----------------
T ss_pred CCCcCC----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC----------------
Confidence 999873 235677888889999999999999999752 3456677999999986532
Q ss_pred eEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcc
Q 044745 364 GYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFN 443 (753)
Q Consensus 364 g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~ 443 (753)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEecc
Q 044745 444 KVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAF 523 (753)
Q Consensus 444 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~ 523 (753)
+.++.||++||. |||+|||++|++++
T Consensus 213 ----------------------------------------------~~~~~fS~~G~~--------~di~APG~~i~s~~ 238 (327)
T 2x8j_A 213 ----------------------------------------------LRLSDFTNTNEE--------IDIVAPGVGIKSTY 238 (327)
T ss_dssp ----------------------------------------------CCBSCC---CCC--------CSEEEECSSEEEEC
T ss_pred ----------------------------------------------CCCCCccCCCCC--------ceEecCcCceEeec
Confidence 457889999985 49999999999998
Q ss_pred CCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhh-----CCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCC
Q 044745 524 SPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSF-----HPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGS 598 (753)
Q Consensus 524 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~ 598 (753)
+.+ .|..++|||||||||||++|||+|+ +|.|++.+||++|++||++++.. +..+|+
T Consensus 239 ~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~~-----~~~~G~ 300 (327)
T 2x8j_A 239 LDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGFT-----AQAEGN 300 (327)
T ss_dssp STT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSSC-----HHHHTT
T ss_pred CCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCCC-----CCceee
Confidence 764 6899999999999999999999999 99999999999999999988642 688999
Q ss_pred CCCCccccCC
Q 044745 599 GHINPVEAVN 608 (753)
Q Consensus 599 G~in~~~Al~ 608 (753)
|++|+.+|++
T Consensus 301 G~vd~~~A~~ 310 (327)
T 2x8j_A 301 GFLTLDLVER 310 (327)
T ss_dssp CEECTTHHHH
T ss_pred eEECHHHHHH
Confidence 9999999987
No 16
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=9.4e-51 Score=428.14 Aligned_cols=260 Identities=27% Similarity=0.393 Sum_probs=221.3
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
++++ .+|+.. +|+||+|||||||||++||+|.++ ++..++|...+ ..+.|.
T Consensus 18 i~~~-~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~~~~---~~~~d~ 68 (279)
T 1thm_A 18 IQAP-QAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK------------------------VVGGWDFVDND---STPQNG 68 (279)
T ss_dssp TTHH-HHHTTC-CCTTCEEEEEESCCCTTCTTTTTT------------------------EEEEEETTTTB---SCCCCS
T ss_pred CChH-HHHhcC-CCCCCEEEEEccCCCCCCcchhcC------------------------ccccccccCCC---CCCCCC
Confidence 4455 899887 799999999999999999999853 44555663321 345789
Q ss_pred CCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCCCcEEEeecCCCCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADGVDIITISLGGQNT 295 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~ 295 (753)
.+|||||||||+|...++. | +.||||+|+|+.+|+++. .+ ++.+++++||+||+++|++|||||||...
T Consensus 69 ~gHGT~vAgiia~~~~n~~---g-----~~GvAp~a~l~~~~v~~~-~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~- 138 (279)
T 1thm_A 69 NGHGTHCAGIAAAVTNNST---G-----IAGTAPKASILAVRVLDN-SGSGTWTAVANGITYAADQGAKVISLSLGGTV- 138 (279)
T ss_dssp SSHHHHHHHHHHCCCSSSS---S-----CCCSSTTCEEEEEECSCT-TSCCCHHHHHHHHHHHHHTTCSEEEECCCBSS-
T ss_pred CCcHHHHHHHHhCccCCCC---c-----cEEeCCCCEEEEEEeeCC-CCCccHHHHHHHHHHHHHCCCCEEEEecCCCC-
Confidence 9999999999999864321 2 389999999999999987 45 78889999999999999999999999873
Q ss_pred CCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCc
Q 044745 296 LNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGK 375 (753)
Q Consensus 296 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 375 (753)
..+.+..++.++.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 139 ---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------------- 187 (279)
T 1thm_A 139 ---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN---------------------------- 187 (279)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT----------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC----------------------------
Confidence 2457788888999999999999999998777778888999999986432
Q ss_pred eeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEE
Q 044745 376 TFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVA 455 (753)
Q Consensus 376 ~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~ 455 (753)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCC
Q 044745 456 LNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPED 535 (753)
Q Consensus 456 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 535 (753)
+.++.||++||.. ||+|||++|+++++.+
T Consensus 188 ----------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~~~--------- 216 (279)
T 1thm_A 188 ----------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPTS--------- 216 (279)
T ss_dssp ----------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETTT---------
T ss_pred ----------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeCCC---------
Confidence 4578899999865 9999999999998764
Q ss_pred cccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCC
Q 044745 536 KRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVN 608 (753)
Q Consensus 536 ~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 608 (753)
.|..++|||||||||||++||| ++|.+++++||++|++||+++... ...||+|+||+.+|++
T Consensus 217 ----~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-----~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 217 ----TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-----GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ----EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-----TTTBSSEECCHHHHHH
T ss_pred ----CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-----CccccCCeeCHHHHhc
Confidence 6999999999999999999999 579999999999999999998765 3579999999999975
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=5.3e-51 Score=431.32 Aligned_cols=265 Identities=22% Similarity=0.247 Sum_probs=212.9
Q ss_pred CCCC-CCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeec-CCCCCCCCCCCCCCCCcchhh
Q 044745 147 RSVE-SDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYY-TTDDISGNTARDIQGHGTHTA 224 (753)
Q Consensus 147 ~~~G-~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~-~g~~~~~~~~~D~~gHGThVA 224 (753)
.++| +||+|||||||||++||+|.+. .+..+++ ... ......|.+|||||||
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~------------------------~~~~~~~~~~~--~~~~d~~~~gHGT~VA 56 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA------------------------DLTVLPTLAPT--AARSDGFMSAHGTHVA 56 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC------------------------EEEECCCSSCC--CCCTTCHHHHHHHHHH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC------------------------eeecCcCCCCC--CCCCCCCCCCccccee
Confidence 3578 6999999999999999999854 1111222 111 1122335679999999
Q ss_pred cccccCcccccccccccccceeecccccceeccccccCCC-CCCHHHHHHHHHHHHHCCCcEEEeecCCCCCCCCcccHH
Q 044745 225 STASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPEL-GCAETAILGAFDDAIADGVDIITISLGGQNTLNFTQDVI 303 (753)
Q Consensus 225 Giiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~-g~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~ 303 (753)
|||+|+.. ..+.||||+|+|+.+|++.+.. +....+++++|+||++++++|||||||...........+
T Consensus 57 Giiag~~~----------~~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~ 126 (282)
T 3zxy_A 57 SIIFGQPE----------TSVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWL 126 (282)
T ss_dssp HHHHCCTT----------SSSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHH
T ss_pred ehhhccCC----------ceeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccHHH
Confidence 99999752 1238999999999999986522 377888999999999999999999999764344455677
Q ss_pred HHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCceeeEEeCC
Q 044745 304 AIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGKTFPLVDGM 383 (753)
Q Consensus 304 ~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~ 383 (753)
..++..+.++|+++|+||||+|......+...|++|+|||++.+
T Consensus 127 ~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------------------ 170 (282)
T 3zxy_A 127 ENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH------------------------------------ 170 (282)
T ss_dssp HHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT------------------------------------
T ss_pred HHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC------------------------------------
Confidence 88888999999999999999998877778888999999986432
Q ss_pred CCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEEeehhhHHH
Q 044745 384 DVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVALNEDNFNS 463 (753)
Q Consensus 384 ~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~ 463 (753)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCCccccccee
Q 044745 464 IYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPEDKRQAKFNV 543 (753)
Q Consensus 464 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~ 543 (753)
+.++.||+||+. ..||||+|||.+|+++.+.+ .|..
T Consensus 171 --------------------------~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~-------------~~~~ 206 (282)
T 3zxy_A 171 --------------------------GHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG-------------GTER 206 (282)
T ss_dssp --------------------------SCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS-------------CEEE
T ss_pred --------------------------CccccccCCCCC-----ccccceeccCcceeeecCCC-------------ceee
Confidence 456789999875 36889999999999998764 6899
Q ss_pred eccccchhHHHHHHHHHHHhhC----CCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCC
Q 044745 544 VSGTSMSCPHAAGVAAYVKSFH----PDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVN 608 (753)
Q Consensus 544 ~sGTSmAaP~VAG~aALl~~~~----P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 608 (753)
++|||||||||||++|||++++ |.++|+|||++|++||++++..... ....+|+|+||+.+|++
T Consensus 207 ~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~~~-~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 207 LSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDAPE-QARRCLAGRLNVSGAFT 274 (282)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC--------CGGGTTCBCCHHHHHH
T ss_pred cCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCCCCC-ccCceeeeEeCHHHHHH
Confidence 9999999999999999999875 8899999999999999987654221 35789999999999986
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=7e-50 Score=428.68 Aligned_cols=278 Identities=28% Similarity=0.352 Sum_probs=223.1
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCC-CCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDD-ISGNTARD 215 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~-~~~~~~~D 215 (753)
++++ .+|..+++|+||+|||||||||++||+|.+. +...++|.+.. .......|
T Consensus 13 i~~~-~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~------------------------~~~~~~~~~~~~~~~~~~~d 67 (310)
T 2ixt_A 13 IYNN-DTLTSTTGGSGINIAVLDTGVNTSHPDLVNN------------------------VEQCKDFTGATTPINNSCTD 67 (310)
T ss_dssp HHTC-TTCCCCCCCTTCEEEEEESCCCTTCTTTTTT------------------------EEEEEESSSSSSCEETCCCC
T ss_pred cCch-hhhhccCCCCCcEEEEEecCCCCCCHHHhhc------------------------ccccccccCCCCCCCCCCCC
Confidence 4555 8999999999999999999999999999853 33445553321 11233568
Q ss_pred CCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCCC-----cEEEee
Q 044745 216 IQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADGV-----DIITIS 289 (753)
Q Consensus 216 ~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~gv-----dVIn~S 289 (753)
..||||||||||+|.... ....+.||||+|+|+.+|++++ .+ +..++++++|+|++++++ +|||||
T Consensus 68 ~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~-~g~~~~~~~~~ai~~a~~~~~~~~~~~Vin~S 139 (310)
T 2ixt_A 68 RNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLD-SGSGYSDDIAAAIRHAADQATATGTKTIISMS 139 (310)
T ss_dssp SSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCT-TSCCCHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcC-CCCCcHHHHHHHHHHHHHhhhccCCCeEEEEc
Confidence 899999999999987521 1122489999999999999987 55 688999999999999888 999999
Q ss_pred cCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCC--CCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEe
Q 044745 290 LGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFI--GSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSI 367 (753)
Q Consensus 290 lG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~--~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~ 367 (753)
||... ....+..++.++.++|++||+||||+|... ..++...|++|+|||++...
T Consensus 140 ~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~------------------- 196 (310)
T 2ixt_A 140 LGSSA----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ------------------- 196 (310)
T ss_dssp CCBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE-------------------
T ss_pred CCCCC----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc-------------------
Confidence 99873 245677888889999999999999999763 44566789999999865210
Q ss_pred ccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccc
Q 044745 368 NSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSS 447 (753)
Q Consensus 368 ~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~ 447 (753)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCC--ceecccCCCCCCCC----CCCCCCceeeCCccEEe
Q 044745 448 VVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAP--VVADFSSRGPNEIV----PDILKPDISAPGVDILA 521 (753)
Q Consensus 448 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~--~~a~fSs~GP~~~~----~~~~KPDI~APG~~I~s 521 (753)
..+ .++.||++||.... .++.||||+|||++|++
T Consensus 197 ----------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s 236 (310)
T 2ixt_A 197 ----------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYS 236 (310)
T ss_dssp ----------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEE
T ss_pred ----------------------------------------cCCCeeeccccCCCCccCCccccccCCCeeEECCCCCEee
Confidence 002 57889999995321 12359999999999999
Q ss_pred ccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCC----CCCCCccC
Q 044745 522 AFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKN----KDAEFAFG 597 (753)
Q Consensus 522 a~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~----~~~~~~~G 597 (753)
+++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||++.+..+. +..+..+|
T Consensus 237 ~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~a~~g~d~~~G 303 (310)
T 2ixt_A 237 TWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIGDDYASG 303 (310)
T ss_dssp ECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBSTTCCSSSBTTTB
T ss_pred ecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCCcccccCCccccc
Confidence 98753 68999999999999999999999999999999999999999998875321 11578999
Q ss_pred CCCCCc
Q 044745 598 SGHINP 603 (753)
Q Consensus 598 ~G~in~ 603 (753)
||++|+
T Consensus 304 ~G~~~v 309 (310)
T 2ixt_A 304 FGFARV 309 (310)
T ss_dssp TCBCCC
T ss_pred cceeec
Confidence 999986
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=5.8e-51 Score=436.45 Aligned_cols=276 Identities=24% Similarity=0.299 Sum_probs=224.3
Q ss_pred cccccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeec-CCCCCCCCCC
Q 044745 135 DFMGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYY-TTDDISGNTA 213 (753)
Q Consensus 135 ~~~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~-~g~~~~~~~~ 213 (753)
++.|++ ++|+....++||+|||||||||++||+|.+. .+....++ .++ ....
T Consensus 6 ~i~G~~-~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~-----------------------~~~~~~~~~~~~---~~~~ 58 (306)
T 4h6w_A 6 NIPGLK-KLWSETRGDPKICVAVLDGIVDQNHPCFIGA-----------------------DLTRLPSLVSGE---ANAN 58 (306)
T ss_dssp -CTTHH-HHHHHCSCCTTCEEEEESSCCCTTSGGGTTC-----------------------EEEECC-------------
T ss_pred CCcCHH-HHHhhhCCCCCCEEEEEcCCCCCCChhHcCC-----------------------cccCCCcccCCC---CCCC
Confidence 345778 8999988889999999999999999999854 12222233 211 1234
Q ss_pred CCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCCCcEEEeecCC
Q 044745 214 RDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADGVDIITISLGG 292 (753)
Q Consensus 214 ~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~gvdVIn~SlG~ 292 (753)
.|..||||||||||+|+.. +.+.||||+|+|+.+|++.+..+ +....++++|+||++++++|||+|||.
T Consensus 59 ~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~ 128 (306)
T 4h6w_A 59 GSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQ 128 (306)
T ss_dssp CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCE
T ss_pred CCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeeccccc
Confidence 4678999999999999742 22489999999999999866333 788889999999999999999999997
Q ss_pred CCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCC
Q 044745 293 QNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSS 372 (753)
Q Consensus 293 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 372 (753)
..........+..++..+.++|++||++|||+|.....++...+++|+|||++.+
T Consensus 129 ~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 183 (306)
T 4h6w_A 129 LTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ------------------------- 183 (306)
T ss_dssp EESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-------------------------
T ss_pred cccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-------------------------
Confidence 6434445667888888999999999999999998877777888999999986432
Q ss_pred CCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCccccccccccc
Q 044745 373 KGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLP 452 (753)
Q Consensus 373 ~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p 452 (753)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCC
Q 044745 453 AVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDD 532 (753)
Q Consensus 453 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~ 532 (753)
+.++.||++|+. ..||||+|||++|+++.+.+
T Consensus 184 -------------------------------------~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~~------ 215 (306)
T 4h6w_A 184 -------------------------------------GKPVDFSNWGDA-----YQKQGILAPGKDILGAKPNG------ 215 (306)
T ss_dssp -------------------------------------SCBCSSSCBCHH-----HHHHEEEEECSSEEEECTTS------
T ss_pred -------------------------------------CCccccccccCC-----cCcceeecCCcCcccccCCC------
Confidence 456778999864 35889999999999998764
Q ss_pred CCCcccccceeeccccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCC
Q 044745 533 PEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSF----HPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVN 608 (753)
Q Consensus 533 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 608 (753)
.|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+.. ....||+|+||+.+|++
T Consensus 216 -------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~~-~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 216 -------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDTD-DQSRCLMGKLNILDAIE 287 (306)
T ss_dssp -------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTCS-CGGGGTTCBCCHHHHHH
T ss_pred -------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCCC-CCCCcceeecCHHHHHH
Confidence 6999999999999999999999865 69999999999999999998776432 24579999999999987
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.2e-50 Score=433.96 Aligned_cols=265 Identities=25% Similarity=0.357 Sum_probs=221.1
Q ss_pred cccccccccCCCCCC--CcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCC--CCCCC
Q 044745 137 MGLNQSITRKRSVES--DIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDD--ISGNT 212 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~--GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~--~~~~~ 212 (753)
++++ .+|+.+ +|+ ||+|||||||||++||+|.++ +...++|.... .....
T Consensus 15 i~~~-~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~------------------------~~~~~~~~~~~~~~~~~~ 68 (320)
T 2z30_A 15 VKAP-SVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------------------IAWCVSTLRGKVSTKLRD 68 (320)
T ss_dssp TTCG-GGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG------------------------EEEEEECGGGCCBCCHHH
T ss_pred cChH-HHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc------------------------cccCccccCCccCCCCCC
Confidence 5556 899988 999 999999999999999999853 33334442111 01112
Q ss_pred CCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHC----------
Q 044745 213 ARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIAD---------- 281 (753)
Q Consensus 213 ~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~---------- 281 (753)
..|..||||||||||+|..+ ...+.||||+|+|+.+|+++. .| +..++++++|+||+++
T Consensus 69 ~~d~~gHGT~vAgiia~~~n---------~~g~~GvAp~a~l~~~~v~~~-~g~~~~~~i~~ai~~a~~~~~~~~~~~~~ 138 (320)
T 2z30_A 69 CADQNGHGTHVIGTIAALNN---------DIGVVGVAPGVQIYSVRVLDA-RGSGSYSDIAIGIEQAILGPDGVADKDGD 138 (320)
T ss_dssp HBCSSSHHHHHHHHHHCCSS---------SBSCCCSSTTCEEEEEECSCT-TSEEEHHHHHHHHHHHHHTTTTCSCTTSS
T ss_pred CCCCCCCHHHHHHHHHcccC---------CCceEeeCCCCEEEEEEeeCC-CCCccHHHHHHHHHHHHhCcccccccccc
Confidence 36789999999999999731 112389999999999999987 55 7889999999999987
Q ss_pred ----------CCcEEEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCcccee
Q 044745 282 ----------GVDIITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFV 351 (753)
Q Consensus 282 ----------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~ 351 (753)
+++|||||||... ....+..++.++.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 139 ~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---- 210 (320)
T 2z30_A 139 GIIAGDPDDDAAEVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN---- 210 (320)
T ss_dssp SCCTTCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT----
T ss_pred cccccccccCCceEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCCC----
Confidence 9999999999873 2456777788899999999999999998877788889999999986432
Q ss_pred eeEEeCCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCc
Q 044745 352 DKVVLGSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGA 431 (753)
Q Consensus 352 ~~~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga 431 (753)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCc
Q 044745 432 EGSVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPD 511 (753)
Q Consensus 432 ~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPD 511 (753)
+.++.||++|| +
T Consensus 211 ----------------------------------------------------------~~~~~~S~~g~----------~ 222 (320)
T 2z30_A 211 ----------------------------------------------------------DNIASFSNRQP----------E 222 (320)
T ss_dssp ----------------------------------------------------------SCBCTTSCSSC----------S
T ss_pred ----------------------------------------------------------CCcCcccCCCC----------C
Confidence 45788999998 7
Q ss_pred eeeCCccEEeccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhC-------------CCCCHHHHHHHHH
Q 044745 512 ISAPGVDILAAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFH-------------PDWSPSAIKSAIM 578 (753)
Q Consensus 512 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~-------------P~ls~~~ik~~L~ 578 (753)
|+|||++|+++++.+ .|..++|||||||||||++|||+|++ |+|++.+||++|+
T Consensus 223 v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~ 289 (320)
T 2z30_A 223 VSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILH 289 (320)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHH
T ss_pred EEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHH
Confidence 899999999998764 68999999999999999999999999 9999999999999
Q ss_pred hcCCCCCCCCCCCCCCccCCCCCCccccCCC
Q 044745 579 TTAWPMNSSKNKDAEFAFGSGHINPVEAVNP 609 (753)
Q Consensus 579 ~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~ 609 (753)
+||+++...+ .+..||+|+||+.+|++.
T Consensus 290 ~ta~~~~~~g---~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 290 ITADDLGPTG---WDADYGYGVVRAALAVQA 317 (320)
T ss_dssp HHSBCCSSSS---SBTTTBTCBCCHHHHHHH
T ss_pred hhCccCCCCC---CCCCcCCceeCHHHHHHH
Confidence 9999986654 267899999999999863
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=2.7e-50 Score=438.55 Aligned_cols=271 Identities=23% Similarity=0.193 Sum_probs=221.2
Q ss_pred cccccccccCCCCCC--CcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCC--CCCCCC
Q 044745 137 MGLNQSITRKRSVES--DIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTD--DISGNT 212 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~--GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~--~~~~~~ 212 (753)
++++ .+|+. .+|+ ||+||||||||| +||+|.++ ++..++|..+ +.....
T Consensus 30 i~~~-~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~------------------------~~~~~~~~~~~~~~~~~~ 82 (347)
T 2iy9_A 30 IGLT-ETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS------------------------EFAKFSFTQDGSPFPVKK 82 (347)
T ss_dssp HTCC-HHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC------------------------EEEEEECBTTCCSSCCSS
T ss_pred CChH-HHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC------------------------cccCCcccCCCCCCCCCC
Confidence 5566 89988 8999 999999999999 99999853 3344555322 122235
Q ss_pred CCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCCHHHHHHHHHHHHHC------CCcEE
Q 044745 213 ARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCAETAILGAFDDAIAD------GVDII 286 (753)
Q Consensus 213 ~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~------gvdVI 286 (753)
+.|..||||||||||+|. .|+ .||||+|+|+.+|++++ .+.. ++++||+||+++ +++||
T Consensus 83 ~~d~~gHGT~vAgiia~~-------~g~-----~GvAp~a~l~~~~v~~~-~~~~--~~~~ai~~a~~~~~~~~~~~~Vi 147 (347)
T 2iy9_A 83 SEALYIHGTAMASLIASR-------YGI-----YGVYPHALISSRRVIPD-GVQD--SWIRAIESIMSNVFLAPGEEKII 147 (347)
T ss_dssp SHHHHHHHHHHHHHHHCS-------SSS-----CCSSTTCEEEEEECCSS-BCTT--HHHHHHHHHHTCTTSCTTEEEEE
T ss_pred CCCCCCcHHHHHHHHhcc-------cCC-----cccCCCCEEEEEEEecC-CCHH--HHHHHHHHHHhhhhcccCCceEE
Confidence 678899999999999997 122 99999999999999877 4433 999999999999 99999
Q ss_pred EeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCC-------CCCccCCCC----------ceEEeecccC--c
Q 044745 287 TISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPF-------IGSTVSVAP----------WLMSVAASNT--D 347 (753)
Q Consensus 287 n~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~~p----------~vitVga~~~--~ 347 (753)
|||||... .......+..++..+.++|++||+||||+|.. ...++...| ++|+|||++. +
T Consensus 148 n~S~G~~~-~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~ 226 (347)
T 2iy9_A 148 NISGGQKG-VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRK 226 (347)
T ss_dssp EESSCBCC-C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCT
T ss_pred EeccccCC-CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCC
Confidence 99999762 23456778888899999999999999999975 345566777 9999998764 2
Q ss_pred cceeeeEEeCCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHH
Q 044745 348 RLFVDKVVLGSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVH 427 (753)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~ 427 (753)
... .
T Consensus 227 g~~-------------------------------------------------------~--------------------- 230 (347)
T 2iy9_A 227 GET-------------------------------------------------------P--------------------- 230 (347)
T ss_dssp TSC-------------------------------------------------------C---------------------
T ss_pred Cce-------------------------------------------------------e---------------------
Confidence 100 0
Q ss_pred hcCceEEEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCC
Q 044745 428 KAGAEGSVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDI 507 (753)
Q Consensus 428 ~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~ 507 (753)
......+.||++||+
T Consensus 231 -----------------------------------------------------------~~~~~~~~fS~~G~~------ 245 (347)
T 2iy9_A 231 -----------------------------------------------------------VLHGGGITGSRFGNN------ 245 (347)
T ss_dssp -----------------------------------------------------------CBCCCSSSCBCBCTT------
T ss_pred -----------------------------------------------------------cccCCCCCCCCCCCC------
Confidence 001345789999994
Q ss_pred CCCceeeCCccEEeccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCC
Q 044745 508 LKPDISAPGVDILAAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSS 587 (753)
Q Consensus 508 ~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~ 587 (753)
||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++...
T Consensus 246 -~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 311 (347)
T 2iy9_A 246 -WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSL 311 (347)
T ss_dssp -TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGG
T ss_pred -CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCC
Confidence 679999999999998754 689999999999999999999999999999999999999999988765
Q ss_pred CCCCCCCccCCCCCCccccCCC
Q 044745 588 KNKDAEFAFGSGHINPVEAVNP 609 (753)
Q Consensus 588 ~~~~~~~~~G~G~in~~~Al~~ 609 (753)
. +..+|+|+||+.+|++.
T Consensus 312 ~----~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 312 V----DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp T----TTSGGGEECCHHHHHHH
T ss_pred C----CccccCCEecHHHHHHH
Confidence 3 46899999999999984
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=1.6e-49 Score=431.49 Aligned_cols=295 Identities=22% Similarity=0.305 Sum_probs=223.6
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCc----ceeeeeec-----CCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNN----KIIGARYY-----TTDD 207 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~----kl~g~~~~-----~g~~ 207 (753)
++++ .+|+.+++|+||+||||||||+ +||+|.++-.. .|+-..........+. ......++ .+.+
T Consensus 19 i~~~-~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (340)
T 3lpc_A 19 VKAD-KVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRP 92 (340)
T ss_dssp CCHH-HHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTT
T ss_pred CCHH-HHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCccccccccccccccCCC
Confidence 5666 8999999999999999999998 99999854111 1100000000000000 00000011 1111
Q ss_pred CCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCCHHHHHHHHHHHHH-------
Q 044745 208 ISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCAETAILGAFDDAIA------- 280 (753)
Q Consensus 208 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~------- 280 (753)
.+.....|..||||||||||+|...++. | +.||||+|+|+.+|+++. .++..++++++|+||++
T Consensus 93 ~~~~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~~v~~~-~~~~~~~~~~ai~~a~~~~~~~~~ 163 (340)
T 3lpc_A 93 DPRKERSDSSWHGSHVAGTIAAVTNNRI---G-----VAGVAYGAKVVPVRALGR-CGGYDSDISDGLYWAAGGRIAGIP 163 (340)
T ss_dssp CGGGSCBCCCCHHHHHHHHHHCCCSSSS---S-----CCCTTTTSEEEEEECCBT-TBCCHHHHHHHHHHHHTCCCTTSC
T ss_pred CcccCCCCCCCCHHHHHHHHHccCCCCC---c-----ceeecCCCEEEEEEEecC-CCCcHHHHHHHHHHHhcccccccc
Confidence 2223457889999999999999864322 2 389999999999999988 66889999999999998
Q ss_pred ---CCCcEEEeecCCCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCC-CccCCCCceEEeecccCccceeeeEEe
Q 044745 281 ---DGVDIITISLGGQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIG-STVSVAPWLMSVAASNTDRLFVDKVVL 356 (753)
Q Consensus 281 ---~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~ 356 (753)
.+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 164 ~~~~~~~Vin~S~G~~~---~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------- 231 (340)
T 3lpc_A 164 ENRNPAKVINMSLGSDG---QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR--------- 231 (340)
T ss_dssp CCSSCCSEEEECCCEES---CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT---------
T ss_pred cccCCCeEEEeCcCCCC---CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC---------
Confidence 89999999999762 23456777788899999999999999997653 356678999999986432
Q ss_pred CCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEE
Q 044745 357 GSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVS 436 (753)
Q Consensus 357 ~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~ 436 (753)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCC
Q 044745 437 LNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPG 516 (753)
Q Consensus 437 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG 516 (753)
+.++.||++|| ||||+|||
T Consensus 232 -----------------------------------------------------~~~~~~S~~g~--------~~di~ApG 250 (340)
T 3lpc_A 232 -----------------------------------------------------GIRASFSNYGV--------DVDLAAPG 250 (340)
T ss_dssp -----------------------------------------------------SSBCTTCCBST--------TCCEEEEC
T ss_pred -----------------------------------------------------CCcCCCCCCCC--------CceEEecC
Confidence 45788999998 45999999
Q ss_pred ccEEeccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhh-C---CCCCHHHHHHHHHhcCCCCCCCCCCCC
Q 044745 517 VDILAAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSF-H---PDWSPSAIKSAIMTTAWPMNSSKNKDA 592 (753)
Q Consensus 517 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---P~ls~~~ik~~L~~TA~~~~~~~~~~~ 592 (753)
++|+++++.+... .....|..++|||||||||||++|||+|+ + |.|++++||++|++||+++... .
T Consensus 251 ~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~~----~ 320 (340)
T 3lpc_A 251 QDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGR----L 320 (340)
T ss_dssp SSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSSC----C
T ss_pred CCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCCC----C
Confidence 9999998765311 11246999999999999999999999998 5 9999999999999999988643 3
Q ss_pred CCccCCCCCCccccCCC
Q 044745 593 EFAFGSGHINPVEAVNP 609 (753)
Q Consensus 593 ~~~~G~G~in~~~Al~~ 609 (753)
+..+|+|+||+.+|++.
T Consensus 321 ~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 321 DRALGSGIVDAEAAVNS 337 (340)
T ss_dssp SSCCCSSBCCHHHHHHH
T ss_pred CCCcccceecHHHHHHH
Confidence 67899999999999874
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=9.4e-49 Score=438.86 Aligned_cols=297 Identities=27% Similarity=0.309 Sum_probs=230.7
Q ss_pred cccccccccccc-CCCCCCCcEEEEEecCCCC------CCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCC
Q 044745 134 WDFMGLNQSITR-KRSVESDIIVGVIDSGIWP------ESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTD 206 (753)
Q Consensus 134 ~~~~g~~~~~~~-~~~~G~GV~VaVIDtGid~------~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~ 206 (753)
.+.++++ .+|. .+++|+||+|||||||||+ +||+|.++ +...++|.+.
T Consensus 5 ~~~i~~~-~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~------------------------i~~~~~~~~~ 59 (434)
T 1wmd_A 5 RGIVKAD-VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK------------------------ITALYALGRT 59 (434)
T ss_dssp HHHTTHH-HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC------------------------EEEEEETTTT
T ss_pred hhhhCch-hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC------------------------EeeeccccCC
Confidence 4567888 8998 7999999999999999999 79999743 4444555332
Q ss_pred CCCCCCCCCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCC---CHHHHHHHHHHHHHCCC
Q 044745 207 DISGNTARDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGC---AETAILGAFDDAIADGV 283 (753)
Q Consensus 207 ~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~---~~~~i~~ai~~a~~~gv 283 (753)
..+.|..||||||||||+|++. + +.||||+|+|+.+|+++. .|. ..+++.++|++|+++|+
T Consensus 60 ----~~~~d~~gHGT~VAgiiag~g~----------~-~~GvAp~a~l~~~~v~~~-~g~~~~~~~~~~~ai~~a~~~g~ 123 (434)
T 1wmd_A 60 ----NNANDTNGHGTHVAGSVLGNGS----------T-NKGMAPQANLVFQSIMDS-GGGLGGLPSNLQTLFSQAYSAGA 123 (434)
T ss_dssp ----TCCCCSSSHHHHHHHHHHCCSS----------S-SCCSSTTSEEEEEECCCT-TSSCTTSCSSHHHHHHHHHHTTC
T ss_pred ----CCCCCCCCcHHHHHHHHHcCCC----------C-ceeeCCCCEEEEEEeecC-CCccccccHHHHHHHHHHHhcCC
Confidence 3567899999999999998641 1 389999999999999987 553 45678999999999999
Q ss_pred cEEEeecCCCCCCCCcccHHHHHHHHH-hhCCcEEEEecCCCCCCCC--CccCCCCceEEeecccCccceeeeEEeCCCe
Q 044745 284 DIITISLGGQNTLNFTQDVIAIGSFHA-MAKGVLTLHSAGNSGPFIG--STVSVAPWLMSVAASNTDRLFVDKVVLGSGQ 360 (753)
Q Consensus 284 dVIn~SlG~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~--~~~~~~p~vitVga~~~~~~~~~~~~~~~~~ 360 (753)
+|||||||...... .++...+++++ .++|++||+||||+|.... ..+..++++|+|||++..+...
T Consensus 124 ~Vin~S~G~~~~~~--~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~--------- 192 (434)
T 1wmd_A 124 RIHTNSWGAAVNGA--YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF--------- 192 (434)
T ss_dssp SEEEECCCBCCTTC--CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG---------
T ss_pred eEEEecCCCCcCCc--CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc---------
Confidence 99999999873222 23455555555 5899999999999998643 4456789999999976542000
Q ss_pred EEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccC
Q 044745 361 TLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDV 440 (753)
Q Consensus 361 ~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~ 440 (753)
+ .+
T Consensus 193 ------------------------------------------~---------------------------------~~-- 195 (434)
T 1wmd_A 193 ------------------------------------------G---------------------------------SY-- 195 (434)
T ss_dssp ------------------------------------------C---------------------------------GG--
T ss_pred ------------------------------------------C---------------------------------cc--
Confidence 0 00
Q ss_pred CcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEE
Q 044745 441 EFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDIL 520 (753)
Q Consensus 441 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~ 520 (753)
....+.++.||++||+. ++++||||+|||++|+
T Consensus 196 ---------------------------------------------~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~ 228 (434)
T 1wmd_A 196 ---------------------------------------------ADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFIL 228 (434)
T ss_dssp ---------------------------------------------GSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEE
T ss_pred ---------------------------------------------cCCCCccccccCCCCCC--CCCCCceEEcCCCCeE
Confidence 01136789999999987 8999999999999999
Q ss_pred eccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCC-----CHHHHHHHHHhcCCCCCCCCCCCCCCc
Q 044745 521 AAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDW-----SPSAIKSAIMTTAWPMNSSKNKDAEFA 595 (753)
Q Consensus 521 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~l-----s~~~ik~~L~~TA~~~~~~~~~~~~~~ 595 (753)
++.+........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.... .+..
T Consensus 229 s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~~~---~~~~ 304 (434)
T 1wmd_A 229 SARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGLGY---PNGN 304 (434)
T ss_dssp EECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSSCS---SCTT
T ss_pred ecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCCCC---CCcc
Confidence 998653210000 00113579999999999999999999999999876 99999999999999864322 3689
Q ss_pred cCCCCCCccccCCCC
Q 044745 596 FGSGHINPVEAVNPG 610 (753)
Q Consensus 596 ~G~G~in~~~Al~~g 610 (753)
+|||++|+.+|++..
T Consensus 305 ~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 305 QGWGRVTLDKSLNVA 319 (434)
T ss_dssp TTTCBCCHHHHHTCE
T ss_pred CCcCeEeHHHhcccc
Confidence 999999999999754
No 24
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=6.3e-48 Score=462.69 Aligned_cols=408 Identities=20% Similarity=0.234 Sum_probs=266.0
Q ss_pred CcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCCCCCcchhhcccccCc
Q 044745 152 DIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDIQGHGTHTASTASGNE 231 (753)
Q Consensus 152 GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~~gHGThVAGiiag~~ 231 (753)
+|+|||||||+|.+|++..-. ..|+...+.+ .| .+.+-+..++.++........|++||||||||||||..
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l------~~Y~~~~dyg-~F--~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~ 284 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRI------GEYSRTHETR-NV--DDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNH 284 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEE------ECTTTTCCCC-EE--SSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCC
T ss_pred CEEEEEEeCCCCCCccccccc------cccccccccc-cc--ccccCCCCccCCCCCccccCCCCCCcHHHHHHHHhcCC
Confidence 699999999998777664310 0111111100 01 11222222221111111123578999999999999986
Q ss_pred ccccccccccccceeecccccceeccccccCCCC--CCHHHHHHHHHHHHH-----CCCcEEEeecCCCCCCCCcccHHH
Q 044745 232 VKDASFFGVGQGTARGGVPSARIAAYKVCSPELG--CAETAILGAFDDAIA-----DGVDIITISLGGQNTLNFTQDVIA 304 (753)
Q Consensus 232 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g--~~~~~i~~ai~~a~~-----~gvdVIn~SlG~~~~~~~~~~~~~ 304 (753)
++ ..+.||||+|+|+.+|+++...+ +....++.+|.+|++ .|++|||||||... .....+.+.
T Consensus 285 -N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~-~~~~~~~l~ 354 (1354)
T 3lxu_X 285 -SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHA-NWSNSGRIG 354 (1354)
T ss_dssp -SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCC-SCSSCCHHH
T ss_pred -CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCC-CCCccHHHH
Confidence 21 22399999999999999876322 366788888888887 79999999999983 223456777
Q ss_pred HHHHHHh-hCCcEEEEecCCCCCCCCCc--cC--CCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCceeeE
Q 044745 305 IGSFHAM-AKGVLTLHSAGNSGPFIGST--VS--VAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGKTFPL 379 (753)
Q Consensus 305 ~a~~~a~-~~Gi~vV~AAGN~G~~~~~~--~~--~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~l 379 (753)
.++.++. ++|++||+||||+|....++ +. ..+++|+|||++...........
T Consensus 355 ~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~----------------------- 411 (1354)
T 3lxu_X 355 ELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM----------------------- 411 (1354)
T ss_dssp HHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC---------------------------
T ss_pred HHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc-----------------------
Confidence 7788876 89999999999999865443 34 37999999997654211000000
Q ss_pred EeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEEeehh
Q 044745 380 VDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVALNED 459 (753)
Q Consensus 380 v~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~ 459 (753)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCCcccc
Q 044745 460 NFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPEDKRQA 539 (753)
Q Consensus 460 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~ 539 (753)
.....+.++.|||+||+. ++++||||+|||++|+++..... +
T Consensus 412 -------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~-----------~ 453 (1354)
T 3lxu_X 412 -------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM-----------S 453 (1354)
T ss_dssp -------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC-----------------------
T ss_pred -------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCC-----------C
Confidence 000125789999999987 89999999999999998755432 4
Q ss_pred cceeeccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccCCCCeeeeC
Q 044745 540 KFNVVSGTSMSCPHAAGVAAYVKS----FHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAVNPGLVYET 615 (753)
Q Consensus 540 ~y~~~sGTSmAaP~VAG~aALl~~----~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~glv~~~ 615 (753)
.|..++|||||||||||++|||++ .+|+|++++||++|++||++++.. .++.||+|+||+.+|++..+.|+.
T Consensus 454 ~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~~----~~~~~G~GlLDa~~AV~~a~~~~~ 529 (1354)
T 3lxu_X 454 KSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGYV----DPFAQGHGLLNVEKAFEHLTEHRQ 529 (1354)
T ss_dssp ---CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTTS----CTTTSSSSBCCHHHHHHHHHTTTT
T ss_pred ceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCCC----CcccccCCEeCHHHHHHHHHhcCC
Confidence 789999999999999999999987 799999999999999999998764 367899999999999999999999
Q ss_pred ChhhHHHHHhcCCCCccccceecCCCcccCCCCCCCCCCCCCCCcEEeeeCCCCceeEEEEEEEEecC---CCCe---eE
Q 044745 616 FEQDYIIMLCSMGYDERNIGKISGNISTCPKGSDKATPKDLNYPSMAAQVSPGKSFTINFPRTVTNVG---LANS---TY 689 (753)
Q Consensus 616 ~~~~~~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~rtvtn~~---~~~~---~y 689 (753)
.+.+|+.|+|..++.... .+....+ .| +. .....++|+-++.|.. .... .-
T Consensus 530 ~p~~~v~f~~~v~~~~~r-gIylR~~-~~--------------~~-------~~~~tv~V~p~f~~~~~~~~~~~i~f~~ 586 (1354)
T 3lxu_X 530 SKDNMLRFSVRVGNNADK-GIHLRQG-VQ--------------RN-------SIDYNVYIEPIFYNDKEADPKDKFNFNV 586 (1354)
T ss_dssp CGGGGEEEEEEETTTTBS-SEEECSS-CC--------------CS-------CEEEEEEEEEEESSCSCSSSTTCSCCCC
T ss_pred CCccceEEEEEecCCCCC-ceEEecc-cc--------------CC-------ceEEEEEEeeeecCcccCChhhccceEE
Confidence 999999999998853321 1111111 00 00 0002223333332211 1111 12
Q ss_pred EEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCCeEEEEEEEEC-----CCeEEEccc
Q 044745 690 KAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGAIVSTSLMWSD-----GNHRVRSPI 752 (753)
Q Consensus 690 ~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~~-----~~~~v~~p~ 752 (753)
++.+....- -|.+ |..|.+ .++.++|.|+++++.. ..+..++.|...| .+...|+||
T Consensus 587 ~l~L~~t~~--wv~~-p~~l~l--~~~~r~~~v~vDp~~L-~~G~h~~~v~~~D~~~~~~gp~f~ipv 648 (1354)
T 3lxu_X 587 RLNLIASQP--WVQC-GAFLDL--SYGTRSIAVRVDPTGL-QPGVHSAVIRAYDTDCVQKGSLFEIPV 648 (1354)
T ss_dssp EEEEEESST--TEEE-CSCEEC--TTSCEEEEEEECGGGC-CSEEEEEEEEEEESSCTTSCCSEEEEE
T ss_pred EEEEecCCC--ceec-ccceee--cCCCceEEEEECCCCC-CCcceeEEEEEEEcCCcccCceEEeeE
Confidence 222222211 2333 888877 5788999999999974 5567899998765 246788886
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.4e-47 Score=404.22 Aligned_cols=236 Identities=25% Similarity=0.348 Sum_probs=202.7
Q ss_pred ccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCCCCCcc
Q 044745 142 SITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDIQGHGT 221 (753)
Q Consensus 142 ~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~~gHGT 221 (753)
.+|..+++|+||+|||||||||++||+|.++ ++..++|.... ..+.|..||||
T Consensus 20 ~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~~~~---~~~~d~~gHGT 72 (284)
T 1sh7_A 20 RNYNANFDGFGVTAYVIDTGVNNNHEEFGGR------------------------SVSGYDFVDND---ADSSDCNGHGT 72 (284)
T ss_dssp SBCCCSCCCTTCEEEEEESCCCTTCTTTTTC------------------------EEEEEETTTTB---SCCCCSSSHHH
T ss_pred hhhhcCCCCCCCEEEEEcCCCCCCChhHcCC------------------------ccccccccCCC---CCCCCCCCcHH
Confidence 6899999999999999999999999999853 33455563321 34678999999
Q ss_pred hhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHC--CCcEEEeecCCCCCCCC
Q 044745 222 HTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIAD--GVDIITISLGGQNTLNF 298 (753)
Q Consensus 222 hVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~--gvdVIn~SlG~~~~~~~ 298 (753)
||||||+|.. .||||+|+|+.+|+++. .+ +..+++++||+|++++ +++|||||||..
T Consensus 73 ~vAgiia~~~--------------~GvAp~a~l~~~kv~~~-~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~----- 132 (284)
T 1sh7_A 73 HVAGTIGGSQ--------------YGVAKNVNIVGVRVLSC-SGSGTTSGVISGVDWVAQNASGPSVANMSLGGG----- 132 (284)
T ss_dssp HHHHHHHCTT--------------TCSSTTCEEEEEECBCT-TSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBS-----
T ss_pred HHHHHHhccc--------------CCcCCCCEEEEEEeeCC-CCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCC-----
Confidence 9999999874 79999999999999987 55 7889999999999984 799999999987
Q ss_pred cccHHHHHHHHHhhCCcEEEEecCCCCCCCC-CccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCcee
Q 044745 299 TQDVIAIGSFHAMAKGVLTLHSAGNSGPFIG-STVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGKTF 377 (753)
Q Consensus 299 ~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 377 (753)
....+..++.++.++|++||+||||+|.... ..+...|++|+|||++.+
T Consensus 133 ~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------------ 182 (284)
T 1sh7_A 133 QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS------------------------------ 182 (284)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT------------------------------
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC------------------------------
Confidence 2467788888999999999999999997642 446678999999986432
Q ss_pred eEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEEee
Q 044745 378 PLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVALN 457 (753)
Q Consensus 378 ~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~ 457 (753)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCCcc
Q 044745 458 EDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPEDKR 537 (753)
Q Consensus 458 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~ 537 (753)
+.++.||++||+. ||+|||++|+++++.+
T Consensus 183 --------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~----------- 211 (284)
T 1sh7_A 183 --------------------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWYDG----------- 211 (284)
T ss_dssp --------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS-----------
T ss_pred --------------------------------CCcCcccCCCCcc--------EEEeccCCeEEecCCC-----------
Confidence 4578899999975 9999999999988764
Q ss_pred cccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCC
Q 044745 538 QAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSS 587 (753)
Q Consensus 538 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~ 587 (753)
.|..++|||||||||||++|||+|++|+|+++|||++|++||++....
T Consensus 212 --~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 259 (284)
T 1sh7_A 212 --GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKVS 259 (284)
T ss_dssp --SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred --CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCcc
Confidence 689999999999999999999999999999999999999999876553
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=4.5e-47 Score=399.81 Aligned_cols=237 Identities=25% Similarity=0.347 Sum_probs=201.8
Q ss_pred ccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCCCCCcc
Q 044745 142 SITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDIQGHGT 221 (753)
Q Consensus 142 ~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~~gHGT 221 (753)
.+|..+++|+||+|+|||||||++||+|.++ +...++|.++. .++.|+.+|||
T Consensus 22 ~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~------------------------~~~~~d~~~~~---~~~~d~~gHGT 74 (278)
T 2b6n_A 22 NNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR------------------------ASSGYDFIDND---YDATDCNGHGT 74 (278)
T ss_dssp SEEECSCCCTTCEEEEEESCCCTTCGGGTTC------------------------EEEEEETTTTB---SCCCCSSSHHH
T ss_pred hhcccCCCCCCCEEEEEeCCCCCCChhHhcc------------------------cccCeecCCCC---CCCCCCCCcHH
Confidence 6899999999999999999999999999853 33445553321 34678999999
Q ss_pred hhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHH--CCCcEEEeecCCCCCCCC
Q 044745 222 HTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIA--DGVDIITISLGGQNTLNF 298 (753)
Q Consensus 222 hVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~--~gvdVIn~SlG~~~~~~~ 298 (753)
||||||+|.. .||||+|+|+.+|++++ .+ +..++++++|+|+++ .+++|||||||...
T Consensus 75 ~vAgiia~~~--------------~GvAp~a~i~~~~v~~~-~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~---- 135 (278)
T 2b6n_A 75 HVAGTIGGST--------------YGVAKNVNVVGVRVLNC-SGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA---- 135 (278)
T ss_dssp HHHHHHHCTT--------------TCSSTTCEEEEEECSCT-TSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC----
T ss_pred HHHHHHHCCC--------------cCCCCCCeEEEEEEECC-CCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc----
Confidence 9999999873 79999999999999987 55 788999999999998 59999999999872
Q ss_pred cccHHHHHHHHHhhCCcEEEEecCCCCCCCC-CccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCCCcee
Q 044745 299 TQDVIAIGSFHAMAKGVLTLHSAGNSGPFIG-STVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSKGKTF 377 (753)
Q Consensus 299 ~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 377 (753)
...+..++.++.++|++||+||||+|.... ..+...|++|+|||++.+
T Consensus 136 -~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------------ 184 (278)
T 2b6n_A 136 -SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN------------------------------ 184 (278)
T ss_dssp -CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------------------------
T ss_pred -CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC------------------------------
Confidence 457778888899999999999999997653 346678999999986432
Q ss_pred eEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccEEEee
Q 044745 378 PLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPAVALN 457 (753)
Q Consensus 378 ~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~ 457 (753)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCCCCcc
Q 044745 458 EDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDPEDKR 537 (753)
Q Consensus 458 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~ 537 (753)
+.++.||++||.. ||+|||++|++++....
T Consensus 185 --------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~---------- 214 (278)
T 2b6n_A 185 --------------------------------DSRSSFSNYGTCL--------DIYAPGSSITSSWYTSN---------- 214 (278)
T ss_dssp --------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTST----------
T ss_pred --------------------------------CCcCCcCCCCCCC--------eEEeCCCCeECcccCCC----------
Confidence 4578899999965 99999999999886532
Q ss_pred cccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCC
Q 044745 538 QAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNS 586 (753)
Q Consensus 538 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~ 586 (753)
..|..++|||||||||||++|||+|++|+|+++|||++|++||++...
T Consensus 215 -~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 262 (278)
T 2b6n_A 215 -SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADKV 262 (278)
T ss_dssp -TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred -CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCc
Confidence 478999999999999999999999999999999999999999986543
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=8e-47 Score=397.95 Aligned_cols=240 Identities=26% Similarity=0.324 Sum_probs=205.5
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
+++. .+|..+.+|+||+|+|||||||++||+|.++ +...++|.+ ..+.|.
T Consensus 18 ~~~~-~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~~-----~~~~d~ 67 (276)
T 4dzt_A 18 LPLS-NSYTYTATGRGVNVYVIDTGIRTTHREFGGR------------------------ARVGYDALG-----GNGQDC 67 (276)
T ss_dssp SSCC-SCEECSCCCTTCEEEEEESCCCTTCGGGTTC------------------------EEEEEETTS-----SCSCCS
T ss_pred CCcc-cceecCCCCCCcEEEEEccCCCCCChhHccC------------------------eeccccCCC-----CCCCCC
Confidence 3444 7899999999999999999999999999853 333444432 345678
Q ss_pred CCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHC--CCcEEEeecCCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIAD--GVDIITISLGGQ 293 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~--gvdVIn~SlG~~ 293 (753)
.||||||||||+|.. .||||+|+|+.+|++++ .+ +..++++++++|+++. +++|||||||..
T Consensus 68 ~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~-~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~ 132 (276)
T 4dzt_A 68 NGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDC-NGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGG 132 (276)
T ss_dssp SSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCT-TSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEE
T ss_pred CCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCC-CCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCC
Confidence 999999999999874 79999999999999987 44 8899999999999987 899999999986
Q ss_pred CCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCc-cCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCC
Q 044745 294 NTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGST-VSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSS 372 (753)
Q Consensus 294 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 372 (753)
....+..++.++.++|+++|+||||+|...... +...|++|+|||++.+
T Consensus 133 -----~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------- 182 (276)
T 4dzt_A 133 -----VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS------------------------- 182 (276)
T ss_dssp -----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------------------
T ss_pred -----CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC-------------------------
Confidence 246788888899999999999999999765433 6678999999985432
Q ss_pred CCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCccccccccccc
Q 044745 373 KGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLP 452 (753)
Q Consensus 373 ~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p 452 (753)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCC
Q 044745 453 AVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDD 532 (753)
Q Consensus 453 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~ 532 (753)
+.++.||++||+. ||+|||++|++++....
T Consensus 183 -------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~----- 212 (276)
T 4dzt_A 183 -------------------------------------DARASFSNYGSCV--------DLFAPGASIPSAWYTSD----- 212 (276)
T ss_dssp -------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTSS-----
T ss_pred -------------------------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccCCC-----
Confidence 5678899999976 99999999999987653
Q ss_pred CCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCC
Q 044745 533 PEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSS 587 (753)
Q Consensus 533 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~ 587 (753)
..|..++|||||||+|||++|||+|++|+|++++||++|++||++....
T Consensus 213 ------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 261 (276)
T 4dzt_A 213 ------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLS 261 (276)
T ss_dssp ------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred ------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccC
Confidence 4789999999999999999999999999999999999999999987654
No 28
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=2.4e-47 Score=443.65 Aligned_cols=291 Identities=19% Similarity=0.191 Sum_probs=203.3
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCC-
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARD- 215 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D- 215 (753)
++++ .+|..+++|+||+|||||||||++||+|.+. .+.+.++|..... +..|.|
T Consensus 57 in~~-~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~-----------------------~~~~~~~~~~~~~-d~~p~d~ 111 (600)
T 2oxa_A 57 LNLW-WAHRTGVLGHGVNVAVVDDGLAIAHPDLADN-----------------------VRPGSKNVVTGSD-DPTPTDP 111 (600)
T ss_dssp CCCH-HHHHTTCSCTTCEEEEESSCCCTTCTTTGGG-----------------------BCSCCBCTTTCSS-CCCCCST
T ss_pred cChH-HHHhcCCCCCCcEEEEecCCcCCCCcchhhc-----------------------cccCceeccCCCC-CCCCCCC
Confidence 4555 8999999999999999999999999999853 1112334422211 133444
Q ss_pred CCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCC--HHHHHHHHHHHHHCCCcEEEeecCCC
Q 044745 216 IQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCA--ETAILGAFDDAIADGVDIITISLGGQ 293 (753)
Q Consensus 216 ~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~--~~~i~~ai~~a~~~gvdVIn~SlG~~ 293 (753)
+.||||||||||||. .++ ..+.||||+|+|+.+|+++. .+.. ...+++....+..++++|||||||..
T Consensus 112 ~~gHGT~vAGiiaa~-~n~--------~g~~GVAp~A~l~~vkv~~~-~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~~ 181 (600)
T 2oxa_A 112 DTGHGTSVSGIIAAV-DNA--------IGTKGIAPRAQLQGFNLLDD-NSQQLQKDWLYALGDSNASRDNRVFNHSYRMS 181 (600)
T ss_dssp TCCHHHHHHHHHHCC-SSS--------SSCCCSSTTCEEEEECTTST-TCCCCHHHHHHHTTTSHHHHTCSEEEECCCCC
T ss_pred CCCCccHHHHHhhcc-cCC--------CcceEEccCCceEEEeeecC-cccchHHHHHHHHhhhhcccCCeEEEEeccCC
Confidence 799999999999998 321 12399999999999999987 5533 23444444457788999999999987
Q ss_pred CCCCCcc----cHHHHHHHH---HhhCCcEEEEecCCCCCCCC----------------------CccCCCCceEEeecc
Q 044745 294 NTLNFTQ----DVIAIGSFH---AMAKGVLTLHSAGNSGPFIG----------------------STVSVAPWLMSVAAS 344 (753)
Q Consensus 294 ~~~~~~~----~~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~----------------------~~~~~~p~vitVga~ 344 (753)
....... ..+..++.. +.++|++||+||||+|.... ...+.++|+|+|||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA~ 261 (600)
T 2oxa_A 182 VVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSAL 261 (600)
T ss_dssp CSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEEE
T ss_pred CCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEecc
Confidence 3222222 222222222 45789999999999986421 111123445555543
Q ss_pred cCccceeeeEEeCCCeEEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhH
Q 044745 345 NTDRLFVDKVVLGSGQTLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFN 424 (753)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~ 424 (753)
+
T Consensus 262 ~------------------------------------------------------------------------------- 262 (600)
T 2oxa_A 262 N------------------------------------------------------------------------------- 262 (600)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 2
Q ss_pred HHHhcCceEEEEeccCCcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCC
Q 044745 425 EVHKAGAEGSVSLNDVEFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIV 504 (753)
Q Consensus 425 ~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~ 504 (753)
..+.++.||++||+.
T Consensus 263 ---------------------------------------------------------------~~g~~a~fS~~G~~v-- 277 (600)
T 2oxa_A 263 ---------------------------------------------------------------ADGVRSSYSSVGSNI-- 277 (600)
T ss_dssp ---------------------------------------------------------------TTSSBCTTCCBCTTE--
T ss_pred ---------------------------------------------------------------CCCCcCCcCCCCCCe--
Confidence 236788999999987
Q ss_pred CCCCCCceeeCCccEEeccCC-------CCCCC--------------CCCCCcccccceeeccccchhHHHHHHHHHHHh
Q 044745 505 PDILKPDISAPGVDILAAFSP-------LGAVS--------------DDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKS 563 (753)
Q Consensus 505 ~~~~KPDI~APG~~I~sa~~~-------~~~~~--------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~ 563 (753)
||+|||++|.+..+. +.... ....+.....|..++|||||||||||++|||+|
T Consensus 278 ------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s 351 (600)
T 2oxa_A 278 ------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMS 351 (600)
T ss_dssp ------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHH
T ss_pred ------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHH
Confidence 999999986443331 10000 000011123489999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCCCCCC-------------------------C---CCCccCCCCCCccccCCCCee
Q 044745 564 FHPDWSPSAIKSAIMTTAWPMNSSKNK-------------------------D---AEFAFGSGHINPVEAVNPGLV 612 (753)
Q Consensus 564 ~~P~ls~~~ik~~L~~TA~~~~~~~~~-------------------------~---~~~~~G~G~in~~~Al~~glv 612 (753)
++|+|++++||++|++||++++....+ . .+..||||+||+.+|++...-
T Consensus 352 ~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~ 428 (600)
T 2oxa_A 352 AYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAAN 428 (600)
T ss_dssp HSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTT
T ss_pred hCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHh
Confidence 999999999999999999998654311 0 247899999999999985443
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=5.1e-47 Score=399.02 Aligned_cols=240 Identities=28% Similarity=0.332 Sum_probs=203.8
Q ss_pred cccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCCCCCcch
Q 044745 143 ITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDIQGHGTH 222 (753)
Q Consensus 143 ~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~~gHGTh 222 (753)
.|. ..+|+||+|+|||||||++||+|.++ +...++|.+ .+.|..|||||
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~------------------------~~~~~~~~~------~~~d~~gHGT~ 72 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR------------------------AQMVKTYYY------SSRDGNGHGTH 72 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC------------------------EEEEEESSS------CSSCSSSHHHH
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc------------------------cccccCCCC------CCCCCCCCHHH
Confidence 444 37899999999999999999999853 333445542 35678999999
Q ss_pred hhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCCC-------cEEEeecCCCC
Q 044745 223 TASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADGV-------DIITISLGGQN 294 (753)
Q Consensus 223 VAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~gv-------dVIn~SlG~~~ 294 (753)
|||||+|.. .||||+|+|+.+|++++ .+ +..++++++|+|++++++ +|||||||..
T Consensus 73 vAgiia~~~--------------~GvAp~a~i~~~~v~~~-~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~- 136 (279)
T 2pwa_A 73 CAGTVGSRT--------------YGVAKKTQLFGVKVLDD-NGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG- 136 (279)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCT-TSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE-
T ss_pred HHHHHHhcc--------------cccCCCCEEEEEEeEcC-CCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCC-
Confidence 999999873 89999999999999988 55 889999999999999887 9999999976
Q ss_pred CCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCC-CccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCCC
Q 044745 295 TLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIG-STVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSSK 373 (753)
Q Consensus 295 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 373 (753)
..+.+..++.++.++|++||+||||+|.... ..+...|++|+|||++.+
T Consensus 137 ----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------------------------- 186 (279)
T 2pwa_A 137 ----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY-------------------------- 186 (279)
T ss_dssp ----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------------------------
T ss_pred ----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC--------------------------
Confidence 2467788888999999999999999998653 346678999999986532
Q ss_pred CceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCcccccccccccE
Q 044745 374 GKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLPA 453 (753)
Q Consensus 374 ~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~ 453 (753)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCCC
Q 044745 454 VALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDDP 533 (753)
Q Consensus 454 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~ 533 (753)
+.++.||++||+. ||+|||++|+++++.+
T Consensus 187 ------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~------- 215 (279)
T 2pwa_A 187 ------------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWIGG------- 215 (279)
T ss_dssp ------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEETTT-------
T ss_pred ------------------------------------CCcCCcCCCCCcc--------eEEEecCCeEEeecCC-------
Confidence 4678899999965 9999999999998764
Q ss_pred CCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCcc
Q 044745 534 EDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPV 604 (753)
Q Consensus 534 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~ 604 (753)
.|..++|||||||||||++|||+|+ |+++++|||++|++||++.... .+|+|..|+.
T Consensus 216 ------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~~-------~~~~g~~n~l 272 (279)
T 2pwa_A 216 ------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDLS-------NIPFGTVNLL 272 (279)
T ss_dssp ------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCCB-------SCCTTSCCEE
T ss_pred ------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccccC-------CCCCCCccEe
Confidence 6899999999999999999999999 9999999999999999886432 3678887763
No 30
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=8.5e-46 Score=421.23 Aligned_cols=278 Identities=15% Similarity=0.175 Sum_probs=216.2
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
++++ .+|..+++|+||+|||||||||++||+|.+.- + ..+.++|..+..+.....|.
T Consensus 41 i~~~-~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~---------------~~~~~d~~~~~~~~~p~~d~ 97 (503)
T 2id4_A 41 INVL-DLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C---------------AEGSWDFNDNTNLPKPRLSD 97 (503)
T ss_dssp CCCH-HHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C---------------GGGCEETTTTBSCCCCCSTT
T ss_pred cChH-HHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c---------------ccCcccCCCCCCCCCCCCCC
Confidence 5555 89999999999999999999999999998641 0 01234553332222233578
Q ss_pred CCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCCHHHHHHHHHHHHHCCCcEEEeecCCCCCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCAETAILGAFDDAIADGVDIITISLGGQNTL 296 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~ 296 (753)
.||||||||||+|...++. | +.||||+|+|+.+|+++. .++..++++||+|+++++ +|||||||.....
T Consensus 98 ~gHGT~vAGiiaa~~~n~~---~-----~~GvAp~a~i~~~rv~~~--~~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~~ 166 (503)
T 2id4_A 98 DYHGTRCAGEIAAKKGNNF---C-----GVGVGYNAKISGIRILSG--DITTEDEAASLIYGLDVN-DIYSCSWGPADDG 166 (503)
T ss_dssp TTHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECTTS--CCCHHHHHHHTTTTTTTC-SEEEECEESCCSS
T ss_pred CChHHHHHHHHHhccCCCC---C-----cEEECCCCEEEEEEeeCC--CCChHHHHHHHHhHhhcC-CEEEeCCCcCCCC
Confidence 9999999999999753321 1 389999999999999865 367889999999999988 9999999986322
Q ss_pred CC---cccHHHHHHHHHh-----hCCcEEEEecCCCCCCCC--Ccc--CCCCceEEeecccCccceeeeEEeCCCeEEee
Q 044745 297 NF---TQDVIAIGSFHAM-----AKGVLTLHSAGNSGPFIG--STV--SVAPWLMSVAASNTDRLFVDKVVLGSGQTLVG 364 (753)
Q Consensus 297 ~~---~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~--~~~--~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g 364 (753)
.. ....+..++.++. .+|++||+||||+|.... .++ ..++++|+|||++.+
T Consensus 167 ~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~----------------- 229 (503)
T 2id4_A 167 RHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK----------------- 229 (503)
T ss_dssp SCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT-----------------
T ss_pred ccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC-----------------
Confidence 11 2234566666665 479999999999997542 222 256789999986532
Q ss_pred EEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCccc
Q 044745 365 YSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNK 444 (753)
Q Consensus 365 ~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~ 444 (753)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceee----CCccEE
Q 044745 445 VSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISA----PGVDIL 520 (753)
Q Consensus 445 ~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~A----PG~~I~ 520 (753)
+.++.||++||.. |++| ||..|+
T Consensus 230 ---------------------------------------------~~~a~~S~~g~~~--------~~~a~~~gpG~~I~ 256 (503)
T 2id4_A 230 ---------------------------------------------DLHPPYSEGCSAV--------MAVTYSSGSGEYIH 256 (503)
T ss_dssp ---------------------------------------------SCCCTTCCCCTTE--------EEEEECSBTTBCEE
T ss_pred ---------------------------------------------CCcCCcCCCCCcc--------eEeecCCCCCCceE
Confidence 4568899999987 8887 899999
Q ss_pred eccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCC-CCC--------C
Q 044745 521 AAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSS-KNK--------D 591 (753)
Q Consensus 521 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~-~~~--------~ 591 (753)
++.... ..|..++|||||||||||++|||+|++|+|++++||++|+.||+++... ... .
T Consensus 257 st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~ 324 (503)
T 2id4_A 257 SSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKK 324 (503)
T ss_dssp EECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSE
T ss_pred eecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCc
Confidence 985443 4799999999999999999999999999999999999999999988754 100 0
Q ss_pred CCCccCCCCCCccccCCCC
Q 044745 592 AEFAFGSGHINPVEAVNPG 610 (753)
Q Consensus 592 ~~~~~G~G~in~~~Al~~g 610 (753)
.+..||+|+||+.+|++..
T Consensus 325 ~~~~~G~G~vda~~Av~~a 343 (503)
T 2id4_A 325 YSHRYGFGKIDAHKLIEMS 343 (503)
T ss_dssp EBTTTBTCBCCHHHHHHHH
T ss_pred cCcccCCcEecHHHHHHHH
Confidence 2568999999999999843
No 31
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=6.1e-46 Score=419.63 Aligned_cols=283 Identities=16% Similarity=0.145 Sum_probs=215.7
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCC---CCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDD---ISGNTA 213 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~---~~~~~~ 213 (753)
++++ .+|..+++|+||+|||||||||++||+|.+.-. ....++|.++. .+...+
T Consensus 25 i~~~-~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~----------------------~~~~~d~~~~~~~p~~~~~~ 81 (471)
T 1p8j_A 25 LNVK-EAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD----------------------PGASFDVNDQDPDPQPRYTQ 81 (471)
T ss_dssp CCCH-HHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC----------------------GGGCEETTTTBSCCCCCCCT
T ss_pred CChH-HHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC----------------------ccCcccccCCCCCCCCccCC
Confidence 5666 899999999999999999999999999985310 01133442221 111245
Q ss_pred CCCCCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCCHHHHHHHHHHHHH-CCCcEEEeecCC
Q 044745 214 RDIQGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCAETAILGAFDDAIA-DGVDIITISLGG 292 (753)
Q Consensus 214 ~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~-~gvdVIn~SlG~ 292 (753)
.|..+|||||||||+|...++. .+.||||+|+|+.+|+++. ..+++++|++++++ ++++|||||||.
T Consensus 82 ~d~~gHGT~vAGiiaa~~~n~~--------g~~GvAp~a~i~~~rv~~g----~~~~~~~ai~~a~~~~~~~Vin~S~G~ 149 (471)
T 1p8j_A 82 MNDNRHGTRCAGEVAAVANNGV--------CGVGVAYNARIGGVRMLDG----EVTDAVEARSLGLNPNHIHIYSASWGP 149 (471)
T ss_dssp TCTTCHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECSSS----CCCHHHHHHHHTSCTTTCCEEEECCBS
T ss_pred CCCCCcHHHHHHHHHeeccCCC--------CCEEECCCCeEEEEEccCC----chhHHHHHHHhhhccCCCeEEEeccCc
Confidence 6889999999999999754321 1389999999999999753 35679999999999 999999999998
Q ss_pred CCCCCC---cccHHHHHHHHHh-----hCCcEEEEecCCCCCCCCC----ccCCCCceEEeecccCccceeeeEEeCCCe
Q 044745 293 QNTLNF---TQDVIAIGSFHAM-----AKGVLTLHSAGNSGPFIGS----TVSVAPWLMSVAASNTDRLFVDKVVLGSGQ 360 (753)
Q Consensus 293 ~~~~~~---~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~~p~vitVga~~~~~~~~~~~~~~~~~ 360 (753)
...... ....+..++.++. .+|++||+||||+|..... ....++++|+|||++.+
T Consensus 150 ~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~------------- 216 (471)
T 1p8j_A 150 EDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF------------- 216 (471)
T ss_dssp CCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-------------
T ss_pred CCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC-------------
Confidence 632111 1233445555554 3699999999999975322 12345889999986532
Q ss_pred EEeeEEeccCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccC
Q 044745 361 TLVGYSINSFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDV 440 (753)
Q Consensus 361 ~~~g~s~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~ 440 (753)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEE
Q 044745 441 EFNKVSSVVSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDIL 520 (753)
Q Consensus 441 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~ 520 (753)
+.++.||++||.. ....+|+..+||.+|+
T Consensus 217 -------------------------------------------------g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~ 245 (471)
T 1p8j_A 217 -------------------------------------------------GNVPWYSEACSST--LATTYSSGNQNEKQIV 245 (471)
T ss_dssp -------------------------------------------------SCCCTTCCBCTTC--CEEEECCCSTTSCCEE
T ss_pred -------------------------------------------------CCcccccCCCCcc--eEEeCCCCCCCCCCEE
Confidence 4578899999986 4455666666778999
Q ss_pred eccCCCCCCCCCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCC--------C
Q 044745 521 AAFSPLGAVSDDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNKD--------A 592 (753)
Q Consensus 521 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~~~~~--------~ 592 (753)
++...+ ..|..++|||||||||||++|||+|++|+|++++||++|++||++++...... .
T Consensus 246 st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~ 313 (471)
T 1p8j_A 246 TTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKV 313 (471)
T ss_dssp EEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEE
T ss_pred EeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCccc
Confidence 987654 46899999999999999999999999999999999999999999886542110 2
Q ss_pred CCccCCCCCCccccCCCC
Q 044745 593 EFAFGSGHINPVEAVNPG 610 (753)
Q Consensus 593 ~~~~G~G~in~~~Al~~g 610 (753)
+..||+|+||+.+|++..
T Consensus 314 ~~~~G~G~vda~~Av~~a 331 (471)
T 1p8j_A 314 SHSYGYGLLDAGAMVALA 331 (471)
T ss_dssp BTTTBTCBCCHHHHHHHH
T ss_pred CCCCCCEEEcHhHHHHHh
Confidence 578999999999999843
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.4e-45 Score=412.78 Aligned_cols=243 Identities=22% Similarity=0.242 Sum_probs=189.2
Q ss_pred ccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeee-cCCCC-CC-CCCCCCCCC
Q 044745 142 SITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARY-YTTDD-IS-GNTARDIQG 218 (753)
Q Consensus 142 ~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~-~~g~~-~~-~~~~~D~~g 218 (753)
..|..+.+|+||+|+|||||||++||+|.++- ....+. +...+ .. ...+.|..|
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-----------------------~~~~~~~v~~~dg~~f~~~~~D~~G 73 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-----------------------MVTDFENVPEEDGTRFHRQASKCDS 73 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTE-----------------------EEEEEECCCCCC-------CTTTTH
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHcccc-----------------------cccCcccccCCCCccccCCCCCCCC
Confidence 37888999999999999999999999998641 111111 11110 00 134568999
Q ss_pred CcchhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHC------CCcEEEeecC
Q 044745 219 HGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIAD------GVDIITISLG 291 (753)
Q Consensus 219 HGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~------gvdVIn~SlG 291 (753)
|||||||||+|.. .||||+|+|+.+|++++ .| ++.+++++||+|+++. +++|||||||
T Consensus 74 HGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~-~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlG 138 (546)
T 2qtw_B 74 HGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNC-QGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLA 138 (546)
T ss_dssp HHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCT-TSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEE
T ss_pred hHHHHHHHHhccC--------------CCcCCCCEEEEEEEECC-CCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCC
Confidence 9999999999874 79999999999999987 55 7889999999999984 8999999999
Q ss_pred CCCCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCC-CccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccC
Q 044745 292 GQNTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIG-STVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSF 370 (753)
Q Consensus 292 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~ 370 (753)
+. ....+..++.++.++|++||+||||+|.+.. ..+...|++|+|||++.+...
T Consensus 139 g~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~-------------------- 193 (546)
T 2qtw_B 139 GG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP-------------------- 193 (546)
T ss_dssp EE-----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB--------------------
T ss_pred CC-----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc--------------------
Confidence 76 2457788888999999999999999997653 346678999999997643100
Q ss_pred CCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCccccccccc
Q 044745 371 SSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVS 450 (753)
Q Consensus 371 ~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~ 450 (753)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCC
Q 044745 451 LPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVS 530 (753)
Q Consensus 451 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~ 530 (753)
...-..||++||. |||+|||++|+++++...
T Consensus 194 --------------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~--- 224 (546)
T 2qtw_B 194 --------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS--- 224 (546)
T ss_dssp --------------------------------------CEETTEECCBSTT--------CCEEEECSSEEEECTTST---
T ss_pred --------------------------------------ccccCCcCCCCCc--------ceEEecCccEEeeccCCC---
Confidence 0000128999984 499999999999987642
Q ss_pred CCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCC
Q 044745 531 DDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPM 584 (753)
Q Consensus 531 ~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~ 584 (753)
..|..++|||||||||||++|||+|++|+|+++|||++|++||.+.
T Consensus 225 --------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 225 --------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 270 (546)
T ss_dssp --------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred --------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 4689999999999999999999999999999999999999999754
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=2.8e-45 Score=386.76 Aligned_cols=231 Identities=28% Similarity=0.358 Sum_probs=197.1
Q ss_pred ccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCCCCCcc
Q 044745 142 SITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDIQGHGT 221 (753)
Q Consensus 142 ~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~~gHGT 221 (753)
..|... +|+||+|||||||||++||+|.+. +...++|... ..|..||||
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~~~------~~d~~gHGT 72 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR------------------------AKQIKSYAST------ARDGHGHGT 72 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC------------------------EEEEEECSSS------SSCSSSHHH
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc------------------------cccccCCCCC------CCCCCCcHH
Confidence 456655 999999999999999999999853 3444455322 237899999
Q ss_pred hhhcccccCcccccccccccccceeecccccceeccccccCCCC-CCHHHHHHHHHHHHHCC-------CcEEEeecCCC
Q 044745 222 HTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELG-CAETAILGAFDDAIADG-------VDIITISLGGQ 293 (753)
Q Consensus 222 hVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g-------vdVIn~SlG~~ 293 (753)
||||||+|+. .||||+|+|+.+|+++. .+ +..++++++|+|+++++ ++|||||||..
T Consensus 73 ~vAgii~~~~--------------~GvAp~a~l~~~~v~~~-~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~ 137 (279)
T 3f7m_A 73 HCAGTIGSKT--------------WGVAKKVSIFGVKVLDD-SGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG 137 (279)
T ss_dssp HHHHHHHCTT--------------TCSSTTCEEEEEECSCT-TSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE
T ss_pred HHHHHHhcCc--------------cccCCCCEEEEEEeeCC-CCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC
Confidence 9999999873 79999999999999987 44 88999999999999886 89999999976
Q ss_pred CCCCCcccHHHHHHHHHhhCCcEEEEecCCCCCCCCCc-cCCCCceEEeecccCccceeeeEEeCCCeEEeeEEeccCCC
Q 044745 294 NTLNFTQDVIAIGSFHAMAKGVLTLHSAGNSGPFIGST-VSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSINSFSS 372 (753)
Q Consensus 294 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 372 (753)
....+..++.++.++|++||+||||+|...... +...|++|+|||++.+
T Consensus 138 -----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------- 187 (279)
T 3f7m_A 138 -----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN------------------------- 187 (279)
T ss_dssp -----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------------------
T ss_pred -----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC-------------------------
Confidence 346788888899999999999999999765433 6678999999985432
Q ss_pred CCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCccccccccccc
Q 044745 373 KGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSVVSLP 452 (753)
Q Consensus 373 ~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p 452 (753)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCCCCCCCC
Q 044745 453 AVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPLGAVSDD 532 (753)
Q Consensus 453 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~ 532 (753)
+.++.||++||.. ||+|||++|+++++.+
T Consensus 188 -------------------------------------~~~~~~S~~g~~~--------di~ApG~~i~s~~~~~------ 216 (279)
T 3f7m_A 188 -------------------------------------DVRSTFSNYGRVV--------DIFAPGTSITSTWIGG------ 216 (279)
T ss_dssp -------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECGGG------
T ss_pred -------------------------------------CCCCCCCCCCCCC--------eEEECCCCeEeecCCC------
Confidence 4678899999965 9999999999998764
Q ss_pred CCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCC
Q 044745 533 PEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSS 587 (753)
Q Consensus 533 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~ 587 (753)
.|..++|||||||+|||++|||+|++|+ ++++||++|++||++....
T Consensus 217 -------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~~ 263 (279)
T 3f7m_A 217 -------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVLT 263 (279)
T ss_dssp -------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCCB
T ss_pred -------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccccc
Confidence 6899999999999999999999999999 9999999999999875443
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=3.6e-43 Score=409.84 Aligned_cols=312 Identities=18% Similarity=0.193 Sum_probs=199.8
Q ss_pred cccccccccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCccccccccCCCccccCcceeeeeecCCCCCCCCCCCCC
Q 044745 137 MGLNQSITRKRSVESDIIVGVIDSGIWPESESFSDEGFGPAPKKWKGACKGGRNFTCNNKIIGARYYTTDDISGNTARDI 216 (753)
Q Consensus 137 ~g~~~~~~~~~~~G~GV~VaVIDtGid~~Hp~f~d~g~~~~~~~w~g~~~~~~~f~~n~kl~g~~~~~g~~~~~~~~~D~ 216 (753)
+++. .+|..+++|+||+|||||||||++||||.++ ...+.++|.....+.....|.
T Consensus 57 inv~-~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-----------------------~~~~~~~~~~~~~dp~p~~~~ 112 (600)
T 3hjr_A 57 LNLW-WAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-----------------------VRPGSKNVVTGSDDPTPTDPD 112 (600)
T ss_dssp CCCH-HHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-----------------------BCSCCBCTTTSSSCCCCCSTT
T ss_pred cCHH-HHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-----------------------cccCcceeecCCCCCCCCCCC
Confidence 3444 7999999999999999999999999999853 111223342221222334467
Q ss_pred CCCcchhhcccccCcccccccccccccceeecccccceeccccccCCCCCCHHHHHHHH-HHHHHCCCcEEEeecCCCCC
Q 044745 217 QGHGTHTASTASGNEVKDASFFGVGQGTARGGVPSARIAAYKVCSPELGCAETAILGAF-DDAIADGVDIITISLGGQNT 295 (753)
Q Consensus 217 ~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai-~~a~~~gvdVIn~SlG~~~~ 295 (753)
++|||||||||||..+ -.| +.||||+|+|+.+|++++...+..++++.++ +++..++++|||+|||....
T Consensus 113 ~gHGThVAGiIAa~~n----~~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~~ 183 (600)
T 3hjr_A 113 TAHGTSVSGIIAAVDN----AIG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMSVV 183 (600)
T ss_dssp CCHHHHHHHHHHCCSS----SSS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCCCS
T ss_pred CChHHHHHHHHhEeCC----CCC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCcccc
Confidence 8999999999998631 112 2899999999999999883336777877776 67788899999999997632
Q ss_pred CCCcccH-----HHHHHHH--HhhCCcEEEEecCCCCCCCCCccCCCCceEEeecccCccceeeeEEeCCCeEEeeEEec
Q 044745 296 LNFTQDV-----IAIGSFH--AMAKGVLTLHSAGNSGPFIGSTVSVAPWLMSVAASNTDRLFVDKVVLGSGQTLVGYSIN 368 (753)
Q Consensus 296 ~~~~~~~-----~~~a~~~--a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~g~s~~ 368 (753)
.....+. +..++.. ...+|+++|+||||.+....... +.+.+. +++.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~~------------g~~~-------- 237 (600)
T 3hjr_A 184 DPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNRT------------GNGP-------- 237 (600)
T ss_dssp SCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEEE------------SSCC--------
T ss_pred CCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------cccccC------------CCCC--------
Confidence 2222221 2222222 23689999999999764310000 000000 0000
Q ss_pred cCCCCCceeeEEeCCCCCCCCCCCCCCCCcCCCCCCCccccccccEEEEeecchhHHHHhcCceEEEEeccCCccccccc
Q 044745 369 SFSSKGKTFPLVDGMDVSRPCESDFDPQLCTDGQGCIDSRLAKGKIVICQSFDGFNEVHKAGAEGSVSLNDVEFNKVSSV 448 (753)
Q Consensus 369 ~~~~~~~~~~lv~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~gkiv~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~ 448 (753)
.+ ......|.+ +......| +++.+
T Consensus 238 -------~~--------------~~~~~~~d~------~~~~~~~I----------------sVgA~------------- 261 (600)
T 3hjr_A 238 -------KL--------------PFENSNLDP------SNSNFWNL----------------VVSAL------------- 261 (600)
T ss_dssp -------CC--------------CSSBTTSSG------GGGSSSEE----------------EEEEE-------------
T ss_pred -------CC--------------CcccccccC------ccccCcce----------------EEeee-------------
Confidence 00 000000110 00000111 11111
Q ss_pred ccccEEEeehhhHHHHHHHHhcCCCCeEEEccceeecCCCCCceecccCCCCCCCCCCCCCCceeeCCccE--------E
Q 044745 449 VSLPAVALNEDNFNSIYSYLKSTKKPEANILSTEAVKDSEAPVVADFSSRGPNEIVPDILKPDISAPGVDI--------L 520 (753)
Q Consensus 449 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I--------~ 520 (753)
...+.++.||++|+.. +++|||.++ .
T Consensus 262 --------------------------------------~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt 295 (600)
T 3hjr_A 262 --------------------------------------NADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVT 295 (600)
T ss_dssp --------------------------------------CTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEE
T ss_pred --------------------------------------cCCCCEeecccCCcce--------eeccCCCCCCCCCcceee
Confidence 2346788999999987 899998763 2
Q ss_pred eccCCCCCCC-------------CCCCCcccccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCC
Q 044745 521 AAFSPLGAVS-------------DDPEDKRQAKFNVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSS 587 (753)
Q Consensus 521 sa~~~~~~~~-------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA~~~~~~ 587 (753)
...++..... ..........|..++|||||||||||++|||+|++|+||++|||++|++||++++..
T Consensus 296 ~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~ 375 (600)
T 3hjr_A 296 TDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAK 375 (600)
T ss_dssp ECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTT
T ss_pred ecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCC
Confidence 2222211000 000112235688999999999999999999999999999999999999999998765
Q ss_pred CCCC----------------------------CCCccCCCCCCccccCCC
Q 044745 588 KNKD----------------------------AEFAFGSGHINPVEAVNP 609 (753)
Q Consensus 588 ~~~~----------------------------~~~~~G~G~in~~~Al~~ 609 (753)
..+. ....||+|+||+.+|++.
T Consensus 376 ~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~ 425 (600)
T 3hjr_A 376 HQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALEL 425 (600)
T ss_dssp CCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHH
T ss_pred CCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHH
Confidence 4320 245789999999999874
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=5.3e-25 Score=250.95 Aligned_cols=99 Identities=24% Similarity=0.315 Sum_probs=78.1
Q ss_pred ceeecccccceeccccccCCCCCCHHHHHHHHHHHHH---CCCcEEEeecCCCCCCC--CcccHHHHHHHHHhhCCcEEE
Q 044745 244 TARGGVPSARIAAYKVCSPELGCAETAILGAFDDAIA---DGVDIITISLGGQNTLN--FTQDVIAIGSFHAMAKGVLTL 318 (753)
Q Consensus 244 ~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~---~gvdVIn~SlG~~~~~~--~~~~~~~~a~~~a~~~Gi~vV 318 (753)
.+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||...... .....+..++.+|..+||+||
T Consensus 273 ~~~gvAp~a~i~~~~~~-----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv 347 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP-----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVL 347 (552)
T ss_dssp HHHHHCTTSEEEEEECC-----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhccCCCCeEEEEEcC-----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEE
Confidence 45899999999999973 246789999999998 79999999999872111 112456677778889999999
Q ss_pred EecCCCCCCC--------CCccCCCCceEEeecccCc
Q 044745 319 HSAGNSGPFI--------GSTVSVAPWLMSVAASNTD 347 (753)
Q Consensus 319 ~AAGN~G~~~--------~~~~~~~p~vitVga~~~~ 347 (753)
+||||+|... ..++...|+|++||+++..
T Consensus 348 ~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 348 AAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp EECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred EecCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 9999999653 2445688999999998653
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.83 E-value=2.5e-21 Score=210.36 Aligned_cols=101 Identities=18% Similarity=0.165 Sum_probs=80.6
Q ss_pred eecccccceeccccccCCCCCCHHHHHHHHHHHHH-CCCcEEEeecCCCCCC---CCcccHHHHHHHHHhhCCcEEEEec
Q 044745 246 RGGVPSARIAAYKVCSPELGCAETAILGAFDDAIA-DGVDIITISLGGQNTL---NFTQDVIAIGSFHAMAKGVLTLHSA 321 (753)
Q Consensus 246 ~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~-~gvdVIn~SlG~~~~~---~~~~~~~~~a~~~a~~~Gi~vV~AA 321 (753)
..+||+++++.|++.+. .++..++++++|+||++ ++++|||||||..... ....+.+..++.+|..+||+||+||
T Consensus 90 g~~aP~a~~~~~~~~~~-~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~As 168 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQ-SASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSS 168 (372)
T ss_dssp HHTTSCEEEEEEEEECT-TSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcCCCCcEEEEEeCCC-CCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 45789999999999765 45778899999999998 8999999999986211 1123466777778889999999999
Q ss_pred CCCCCCCC-------------CccCCCCceEEeecccCc
Q 044745 322 GNSGPFIG-------------STVSVAPWLMSVAASNTD 347 (753)
Q Consensus 322 GN~G~~~~-------------~~~~~~p~vitVga~~~~ 347 (753)
||+|...+ ..+...|+|++||+++..
T Consensus 169 Gd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 169 GDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp CSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 99997532 345678999999998754
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.01 E-value=3.5e-10 Score=101.30 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=67.3
Q ss_pred ccCceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceec
Q 044745 48 NFLMVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTDHERQKLASMEGVVSVFPSRTLQ 127 (753)
Q Consensus 48 ~~~~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~ 127 (753)
..+++|||+|++... ......|.+|+.+++.......++.|+|++.|+||+++++++++++|+++|+|.+||+|+.++
T Consensus 35 ~ip~~YIV~lk~~~~--~~~~~~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~ 112 (114)
T 2w2n_P 35 RLPGTYVVVLKEETH--LSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVF 112 (114)
T ss_dssp EEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEE
T ss_pred CCCCcEEEEECCCCC--HHHHHHHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEe
Confidence 457899999998764 445567888998877544456799999999999999999999999999999999999999876
Q ss_pred c
Q 044745 128 L 128 (753)
Q Consensus 128 ~ 128 (753)
.
T Consensus 113 ~ 113 (114)
T 2w2n_P 113 A 113 (114)
T ss_dssp E
T ss_pred c
Confidence 4
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.92 E-value=1.9e-09 Score=122.03 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=61.3
Q ss_pred eecccccceeccccccCCCCCCHHHHHHHHHHHH--HCCCcEEEeecCCCCCC--CCcccHHHHHHHHHhhCCcEEEEec
Q 044745 246 RGGVPSARIAAYKVCSPELGCAETAILGAFDDAI--ADGVDIITISLGGQNTL--NFTQDVIAIGSFHAMAKGVLTLHSA 321 (753)
Q Consensus 246 ~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~--~~gvdVIn~SlG~~~~~--~~~~~~~~~a~~~a~~~Gi~vV~AA 321 (753)
.+++++..++.|-.... ....+.++..+++.. .+-++|||+|||..... ..+...+...+..+..+||.|++|+
T Consensus 262 ~a~~~~i~~~~~~~~g~--~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~AS 339 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR--HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFAS 339 (544)
T ss_dssp HHHSTTSEEEEECCCSC--CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hccCCCceEEEEecCCc--ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 34444555544543211 112233444444433 34578999999987211 1122344556667889999999999
Q ss_pred CCCCCCC----------CCccCCCCceEEeecccC
Q 044745 322 GNSGPFI----------GSTVSVAPWLMSVAASNT 346 (753)
Q Consensus 322 GN~G~~~----------~~~~~~~p~vitVga~~~ 346 (753)
||+|... ...+...|||++||+++.
T Consensus 340 GD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 340 GDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp CSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 9999753 234568899999999864
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.91 E-value=3.5e-09 Score=88.68 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=57.3
Q ss_pred cCceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceecc
Q 044745 49 FLMVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTDHERQKLASMEGVVSVFPSRTLQL 128 (753)
Q Consensus 49 ~~~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 128 (753)
.+++|||.|++... . ...+..+++ ..+.++.++|++ |+||+++++++++++|+++|+|.+||++..+++
T Consensus 7 i~~~YIV~~k~~~~--~--~~~~~~~~~------~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~ 75 (80)
T 3cnq_P 7 GEKKYIVGFKQGFK--S--CAKKEDVIS------EKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRA 75 (80)
T ss_dssp -CCEEEEEECTTCC--S--HHHHHHHHH------TTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEE
T ss_pred CCCCEEEEECCCCC--h--HHHHHHHHH------HcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEE
Confidence 46899999998765 1 111222222 235689999988 999999999999999999999999999999998
Q ss_pred ccCC
Q 044745 129 HTTR 132 (753)
Q Consensus 129 ~~~~ 132 (753)
+++.
T Consensus 76 ~tt~ 79 (80)
T 3cnq_P 76 LSAT 79 (80)
T ss_dssp CCC-
T ss_pred eeec
Confidence 7654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.79 E-value=6.1e-09 Score=94.35 Aligned_cols=80 Identities=11% Similarity=0.074 Sum_probs=62.8
Q ss_pred cccCceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCcee
Q 044745 47 LNFLMVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTDHERQKLASMEGVVSVFPSRTL 126 (753)
Q Consensus 47 ~~~~~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~ 126 (753)
...+++|||.||+... ......+.+++.++.++.....++.++|++.|+||+++++.++++.|+++|+|.+|++++.+
T Consensus 44 ~~Ip~~YIV~~K~~~~--~~~~~~~~~~l~~~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v 121 (124)
T 2qtw_A 44 WRLPGTYVVVLKEETH--LSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 121 (124)
T ss_dssp GEEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred cCCCCCEEEEECCCCC--HHHHHHHHHHHHHHHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceE
Confidence 3468999999998765 33334444555554432234578999999999999999999999999999999999999987
Q ss_pred cc
Q 044745 127 QL 128 (753)
Q Consensus 127 ~~ 128 (753)
+.
T Consensus 122 ~a 123 (124)
T 2qtw_A 122 FA 123 (124)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.61 E-value=1e-07 Score=78.71 Aligned_cols=70 Identities=14% Similarity=0.190 Sum_probs=57.6
Q ss_pred ceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEec-ceeeEEEEEeCHHHHHHhhcC--CCeEEEEeCceec
Q 044745 51 MVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYK-RSFNGFAAKLTDHERQKLASM--EGVVSVFPSRTLQ 127 (753)
Q Consensus 51 ~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~-~~~~g~s~~~~~~~~~~L~~~--p~V~~v~~~~~~~ 127 (753)
++|||.||++.. ......+.++++.. ..++.+.|+ ..|+||+++++++.+++|+++ |.|.+||+|..++
T Consensus 3 ~sYIV~lk~~~~--~~~~~~~~~~~~~~------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~ 74 (76)
T 1v5i_B 3 GKFIVIFKNDVS--EDKIRETKDEVIAE------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAH 74 (76)
T ss_dssp EEEEEEECTTCC--HHHHHHHHHHHHHH------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEE
T ss_pred ceEEEEECCCCC--HHHHHHHHHHHHhh------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEe
Confidence 789999998765 33444566666654 247899994 899999999999999999999 8899999999876
Q ss_pred c
Q 044745 128 L 128 (753)
Q Consensus 128 ~ 128 (753)
.
T Consensus 75 ~ 75 (76)
T 1v5i_B 75 A 75 (76)
T ss_dssp C
T ss_pred C
Confidence 4
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.57 E-value=0.00023 Score=69.02 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=64.0
Q ss_pred CCCCcCCCCCCCccc-------cccccEEEEee------cchhHHHHhcCceEEEEeccCCcc--cc-----cccccccE
Q 044745 394 DPQLCTDGQGCIDSR-------LAKGKIVICQS------FDGFNEVHKAGAEGSVSLNDVEFN--KV-----SSVVSLPA 453 (753)
Q Consensus 394 ~~~~C~~~~~~~~~~-------~~~gkiv~~~~------~~k~~~~~~~Ga~g~i~~~~~~~~--~~-----~~~~~~p~ 453 (753)
+...|.+ ...... ..+|||+|++| .+|..+++++||.++| +||+... .. .....||+
T Consensus 82 ~~~GC~~--~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avI-IyNn~~~g~~~~~m~~~~~~~IPs 158 (194)
T 3icu_A 82 ALNACNP--HTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAV-IFNFPGTRNEVIPMSHPGAVDIVA 158 (194)
T ss_dssp CTTCCST--TCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEE-EECCTTCTTCCCCCCCTTCCSSEE
T ss_pred CcCCCCC--CccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEE-EEeCCCCCCceeeecCCCCCceeE
Confidence 4578987 332211 25789999999 3699999999999999 9997421 11 23357999
Q ss_pred EEeehhhHHHHHHHHhcCCCCeEEE
Q 044745 454 VALNEDNFNSIYSYLKSTKKPEANI 478 (753)
Q Consensus 454 ~~i~~~~g~~l~~~~~~~~~~~~~i 478 (753)
++|+..+|+.|++++..+...+++|
T Consensus 159 v~Is~~~G~~L~~~L~~G~~Vtvti 183 (194)
T 3icu_A 159 IMIGNLKGTKILQSIQRGIQVTMVI 183 (194)
T ss_dssp EEECHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEECHHHHHHHHHHHHCCCeEEEEE
Confidence 9999999999999999998888887
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.47 E-value=0.00015 Score=57.55 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=50.6
Q ss_pred ceEEEEecccCCCCCcchhhHHHHHHHHhCCCCccceEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceec
Q 044745 51 MVHIVYLGSLFRGEYETSSQHQSILQEVIGDSSVENVLVRSYKRSFNGFAAKLTDHERQKLASMEGVVSVFPSRTLQ 127 (753)
Q Consensus 51 ~~yIV~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~v~~~~~~~ 127 (753)
.+|||.|++... ..+.+ ...+.++.++| ..+++++++++.+.++.|+++|+|++|++|...+
T Consensus 2 ~~~IV~f~~~~~--------~~~~i------~~~gG~i~~~~-~~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 2 IRVIVSVDKAKF--------NPHEV------LGIGGHIVYQF-KLIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp EEEEEEECGGGC--------CGGGG------GGGTCEEEEEC-SSSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred eeEEEEEcCcch--------hHHHH------HHCCCEEEEEe-cCCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 589999987522 11112 44578999999 8899999999999999999999999999998764
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.90 E-value=0.15 Score=45.52 Aligned_cols=70 Identities=19% Similarity=0.191 Sum_probs=50.1
Q ss_pred eEEEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCCeEEEEEEEE-CCCeEEEc
Q 044745 672 TINFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGAIVSTSLMWS-DGNHRVRS 750 (753)
Q Consensus 672 ~~~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~-~~~~~v~~ 750 (753)
+.+.+.+++|+|..+..|+..... - ++ |+|..-++ ++|+++.++|+|.+.. .+.+.+.|... ++...+.+
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~~~--~-F~--i~P~~g~L-~pg~~~~i~V~F~P~~---~g~~~~~l~v~~~~g~~~~v 112 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKTCR--P-FS--IEPAIGTL-NVGESMQLEVEFEPQS---VGDHSGRLIVCYDTGEKVFV 112 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEECCT--T-EE--EESSEEEE-CTTCEEEEEEEECCSS---SBCCCCBCEEEESSSCEECC
T ss_pred eEEEEEEEEECCCCCEEEEEecCC--C-eE--EECCcCEE-CCCCEEEEEEEEEcCC---CccEEEEEEEEECCCCEEEE
Confidence 556667899999988888776533 3 55 58999999 7999999999999985 33345555553 54444433
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=91.56 E-value=0.48 Score=51.76 Aligned_cols=61 Identities=21% Similarity=0.303 Sum_probs=50.2
Q ss_pred ccccccEEEEee-----cchhHHHHhcCceEEEEeccCCcccc------cccccccEEEeehhhHHHHHHHHh
Q 044745 408 RLAKGKIVICQS-----FDGFNEVHKAGAEGSVSLNDVEFNKV------SSVVSLPAVALNEDNFNSIYSYLK 469 (753)
Q Consensus 408 ~~~~gkiv~~~~-----~~k~~~~~~~Ga~g~i~~~~~~~~~~------~~~~~~p~~~i~~~~g~~l~~~~~ 469 (753)
.+++||||++.+ ..|..+++++||.|+| ++++..... .....+|...++..+++.|...+.
T Consensus 111 ~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvI-i~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 111 KDLNGKIALIQRGNISFADKVRNAAKQGAKAVI-IYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEE-EECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEE-EEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 479999999986 5788999999999999 888753222 134578999999999999999984
No 46
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=90.05 E-value=0.22 Score=61.20 Aligned_cols=25 Identities=20% Similarity=0.435 Sum_probs=23.3
Q ss_pred CCCCCCcEEEEEecCCCCCCCCccC
Q 044745 147 RSVESDIIVGVIDSGIWPESESFSD 171 (753)
Q Consensus 147 ~~~G~GV~VaVIDtGid~~Hp~f~d 171 (753)
.++|+||+|||+|||||+.+|.|.-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 6899999999999999999999973
No 47
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=89.49 E-value=0.74 Score=50.66 Aligned_cols=71 Identities=20% Similarity=0.317 Sum_probs=53.6
Q ss_pred cccccccEEEEeecc--------------h----hHHHHhcCceEEEEeccCCccc--------c---cccccccEEEee
Q 044745 407 SRLAKGKIVICQSFD--------------G----FNEVHKAGAEGSVSLNDVEFNK--------V---SSVVSLPAVALN 457 (753)
Q Consensus 407 ~~~~~gkiv~~~~~~--------------k----~~~~~~~Ga~g~i~~~~~~~~~--------~---~~~~~~p~~~i~ 457 (753)
+.+++||||++.+.. | ..++.++||+|+| ++++.... . .....+|++.++
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avI-i~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is 202 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGII-IRSIGTDHDRMAHTGMMRYEEGVTAIPAAAIS 202 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEE-EECSCSCCSSCCCCCBCCCCTTSCCCCEEEEC
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEE-EEccCCcccccccCCccccCCCCCCCCeEEec
Confidence 468999999998721 2 2358899999999 88754321 1 123579999999
Q ss_pred hhhHHHHHHHHhcCCCCeEEE
Q 044745 458 EDNFNSIYSYLKSTKKPEANI 478 (753)
Q Consensus 458 ~~~g~~l~~~~~~~~~~~~~i 478 (753)
.++++.|...+..+...++++
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l 223 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISL 223 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEE
Confidence 999999999998876666666
No 48
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=82.99 E-value=0.69 Score=50.86 Aligned_cols=31 Identities=29% Similarity=0.280 Sum_probs=26.8
Q ss_pred CCCceecccCCCCCCCCCCCCCCceeeCCccEEeccCCC
Q 044745 488 EAPVVADFSSRGPNEIVPDILKPDISAPGVDILAAFSPL 526 (753)
Q Consensus 488 ~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~ 526 (753)
..+.++.||++||.. ||+|||++|+++++.+
T Consensus 182 ~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 182 SNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp TTCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 347799999999966 9999999999998754
No 49
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.08 E-value=1.9 Score=37.20 Aligned_cols=66 Identities=6% Similarity=0.095 Sum_probs=47.6
Q ss_pred eEEEEEEEEecCCCCeeEEEEEecCC-ceEEEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCCeEEEEEEEE
Q 044745 672 TINFPRTVTNVGLANSTYKAKILQNS-KIVSIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGAIVSTSLMWS 742 (753)
Q Consensus 672 ~~~~~rtvtn~~~~~~~y~~~~~~~~-g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~ 742 (753)
..+.+.+++|.|+.+..|+....... + ...+++|..-.+ ++|++++++|+|.+.. .+. +.-.|++.
T Consensus 27 ~~~~~~~l~N~g~~p~~~~~~~~~~~~~-~~f~v~p~~g~i-~pg~~~~i~V~f~~~~--~g~-f~~~i~v~ 93 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALFNMTPPTSALG-ACFVFSPKEGII-EPSGVQAIQISFSSII--LGN-FEEEFLVN 93 (112)
T ss_dssp CEEEEEEEEECCSSCEEEEECCCSSHHH-HHCEEESSEEEE-CTTBCCEEEEEECCCC--CEE-EEEEECEE
T ss_pred EEEEEEEEEECCcceEEEEEecCCcccc-CcEEEECCcCEE-CCCCEEEEEEEEECCC--cce-EEEEEEEE
Confidence 45556789999999999998432111 1 246778999999 7899999999999975 233 44556664
No 50
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=77.58 E-value=8 Score=33.81 Aligned_cols=54 Identities=11% Similarity=0.099 Sum_probs=44.2
Q ss_pred eEEEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEecc
Q 044745 672 TINFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKG 728 (753)
Q Consensus 672 ~~~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 728 (753)
.-..+..+.|....+.+|+++++..++ +++. .+..+++ ++++..++.|.+..+.
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~-l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLND-VSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSS-CEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcc-cEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 445777899999999999999998777 6664 2556888 8999999999998865
No 51
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=73.89 E-value=2.4 Score=49.29 Aligned_cols=63 Identities=22% Similarity=0.309 Sum_probs=49.0
Q ss_pred cccccccEEEEee-----cchhHHHHhcCceEEEEeccCCcc----c-------------------c------c------
Q 044745 407 SRLAKGKIVICQS-----FDGFNEVHKAGAEGSVSLNDVEFN----K-------------------V------S------ 446 (753)
Q Consensus 407 ~~~~~gkiv~~~~-----~~k~~~~~~~Ga~g~i~~~~~~~~----~-------------------~------~------ 446 (753)
..+++|||||+++ .+|..+++.+||+|+| +|++... + . .
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gvi-iy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG 228 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGII-LYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPG 228 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEE-EECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTT
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEE-EEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCC
Confidence 3479999999997 6899999999999999 8875210 0 0 0
Q ss_pred ----------------ccccccEEEeehhhHHHHHHHHhc
Q 044745 447 ----------------SVVSLPAVALNEDNFNSIYSYLKS 470 (753)
Q Consensus 447 ----------------~~~~~p~~~i~~~~g~~l~~~~~~ 470 (753)
....||++.|+..+++.|+..+..
T Consensus 229 ~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 229 YPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp SCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 013689999999999999987754
No 52
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=73.83 E-value=3.1 Score=47.74 Aligned_cols=61 Identities=11% Similarity=0.253 Sum_probs=47.2
Q ss_pred ccccccEEEEee-----cchhHHHHhcCceEEEEeccCCccc-c---------------c--------------------
Q 044745 408 RLAKGKIVICQS-----FDGFNEVHKAGAEGSVSLNDVEFNK-V---------------S-------------------- 446 (753)
Q Consensus 408 ~~~~gkiv~~~~-----~~k~~~~~~~Ga~g~i~~~~~~~~~-~---------------~-------------------- 446 (753)
.+++||||++.+ .+|..+++.+||+|+| +|++.... . .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvi-i~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~ 206 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVL-IYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRS 206 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEE-EECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSS
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEE-EEeccccccccccccccccccccCCCCCCCCCcccccccccccccc
Confidence 479999999987 5789999999999999 87754210 0 0
Q ss_pred -ccccccEEEeehhhHHHHHHHHh
Q 044745 447 -SVVSLPAVALNEDNFNSIYSYLK 469 (753)
Q Consensus 447 -~~~~~p~~~i~~~~g~~l~~~~~ 469 (753)
....||+..|+..+++.|...+.
T Consensus 207 ~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 207 SGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cCCCCCCEEecCHHHHHHHHHHcc
Confidence 01258999999999999987654
No 53
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=67.17 E-value=11 Score=34.11 Aligned_cols=55 Identities=16% Similarity=0.041 Sum_probs=41.6
Q ss_pred eEEEEEEEEecCCCCeeEEEEEecC----CceEEEEEEcCeEEEeeCCcEEEEEEEEEecc
Q 044745 672 TINFPRTVTNVGLANSTYKAKILQN----SKIVSIKVVPESLSFKSLNEKKSFSVTVTGKG 728 (753)
Q Consensus 672 ~~~~~rtvtn~~~~~~~y~~~~~~~----~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 728 (753)
..+-+.|++|.|.-+.+|+...... .. --++|+|..-++ ++|++..++|++.++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~-~wl~v~P~~G~L-~Pge~~~I~v~~~v~~ 102 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCK-PWLRAEPFEGYL-EPNETVDISLDVYVSK 102 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSC-TTEEEESCEEEE-CTTCEEEEEEEECBCH
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhh-HhhhcCCccccc-CCCCeeEEEEEEEEcc
Confidence 4455668999999999999985321 11 125568999999 8999999999998743
No 54
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=64.70 E-value=26 Score=31.02 Aligned_cols=51 Identities=20% Similarity=0.198 Sum_probs=36.7
Q ss_pred eeEEEEEEEEecCCCC-eeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEe
Q 044745 671 FTINFPRTVTNVGLAN-STYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTG 726 (753)
Q Consensus 671 ~~~~~~rtvtn~~~~~-~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~ 726 (753)
...+++.||+|.|..+ .-|++.+... | ..+.-. .+.+ ++|++++++++..+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyvn-g-~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYIN-G-TLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEET-T-EEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEEC-C-EEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 5789999999999765 6788887664 4 444332 3456 78899888777764
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=63.17 E-value=17 Score=35.52 Aligned_cols=66 Identities=11% Similarity=-0.006 Sum_probs=46.6
Q ss_pred eEEEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCCeEEEEEEEE
Q 044745 672 TINFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGAIVSTSLMWS 742 (753)
Q Consensus 672 ~~~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~ 742 (753)
..+.+.+++|.|+.+-+++... .|+. ++...+|. .+ ++|++.+++|+++......-+...+.|+..
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~-~p~~-~~~~~~~~--~I-~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~ 85 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVS-LPSF-VSLDDRAF--RL-QAREPRELNLSLAVPRNMPPGMKDEPLVLE 85 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEE-CCTT-EECSCCEE--EE-CSSSCEEEEEEECCCTTCCSEEEEEEEEEE
T ss_pred cceEEEEEEeCCCCceEEEecc-CCCc-eEeeeCcc--ee-CCCCceEEEEEEcchhcccCCceeeEEEEE
Confidence 3455678999999888877653 3666 66544444 44 789999999999888744445566777774
No 56
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=61.86 E-value=28 Score=30.70 Aligned_cols=52 Identities=15% Similarity=0.073 Sum_probs=43.7
Q ss_pred eEEEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEec
Q 044745 672 TINFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGK 727 (753)
Q Consensus 672 ~~~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 727 (753)
..+-..+++|.++..--|.+...+|.- ..|.|..=.+ +++++..+.|++.+.
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~---y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRR---YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGG---EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCc---eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 456667999999988999999999865 5678998777 789999999999874
No 57
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=54.14 E-value=34 Score=30.18 Aligned_cols=50 Identities=18% Similarity=0.191 Sum_probs=42.0
Q ss_pred EEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEec
Q 044745 674 NFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGK 727 (753)
Q Consensus 674 ~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 727 (753)
+-..+++|.++..--|.++..+|.- ..|.|..=.+ +++++..+.|++.+-
T Consensus 28 ~~~l~l~N~s~~~vaFKVKTT~p~~---y~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 28 TYHIKITNAGGRRIGWAIKTTNMRR---LSVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CEEEEEEECSSSCEEEEEEESCTTT---EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred EEEEEEECCCCCeEEEEEEcCCCCc---EEEECCCeEE-CCCCEEEEEEEecCC
Confidence 4456889999988999999999976 5678998878 789999999999873
No 58
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=52.15 E-value=30 Score=31.67 Aligned_cols=51 Identities=20% Similarity=0.161 Sum_probs=42.7
Q ss_pred EEEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEec
Q 044745 673 INFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGK 727 (753)
Q Consensus 673 ~~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 727 (753)
++-..+|+|.++..--|.+...+|.- ..|.|..=.+ +++++.+++|++...
T Consensus 37 ~~~~l~L~N~s~~~VaFKVKTT~p~~---y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 37 KKTLIVLTNVTKNIVAFKVRTTAPEK---YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCEEEEEEBCSSSCEEEEEEESCTTT---EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred EEEEEEEEcCCCCeEEEEEECCCCCc---eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 34467899999988999999999965 5578998777 789999999999874
No 59
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=51.91 E-value=24 Score=37.37 Aligned_cols=56 Identities=14% Similarity=0.037 Sum_probs=42.6
Q ss_pred eEEEEEEEEecCCCCeeEEEEEecCCceEE---EEEEcCeEEEeeCCcEEEEEEEEEecc
Q 044745 672 TINFPRTVTNVGLANSTYKAKILQNSKIVS---IKVVPESLSFKSLNEKKSFSVTVTGKG 728 (753)
Q Consensus 672 ~~~~~rtvtn~~~~~~~y~~~~~~~~g~~~---v~v~p~~~~~~~~~~~~~~~vt~~~~~ 728 (753)
..+-+.|++|.|..+.+|+........... ++|+|..-++ .+|++.+++|++.+..
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSK 105 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCT
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECH
Confidence 455566899999999999996543221011 6778999999 8999999999998765
No 60
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=50.24 E-value=47 Score=28.49 Aligned_cols=49 Identities=18% Similarity=0.177 Sum_probs=41.3
Q ss_pred EEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEec
Q 044745 675 FPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGK 727 (753)
Q Consensus 675 ~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 727 (753)
-+.+++|.++..-.|.+....|.- ..|+|..=.+ ++|++.++.|+..+.
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p~~---y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNNNE---YRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCSSS---EEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCc---eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 456889999999999999998865 5568988777 789999999999874
No 61
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=49.31 E-value=39 Score=39.17 Aligned_cols=56 Identities=9% Similarity=0.109 Sum_probs=36.6
Q ss_pred eeEEEEEEEEecCCCCeeEEEEE--ecCCce-----EEEEEEcCeEEEeeCCcEEEEEEEEEecc
Q 044745 671 FTINFPRTVTNVGLANSTYKAKI--LQNSKI-----VSIKVVPESLSFKSLNEKKSFSVTVTGKG 728 (753)
Q Consensus 671 ~~~~~~rtvtn~~~~~~~y~~~~--~~~~g~-----~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 728 (753)
...+++.+|||+|+....-.+++ ..|.+. ..+. -=.++.+ ++||+++++++++...
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~-gF~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLR-GFAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEE-EEEEEEE-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhh-hccccee-CCCCeEEEEEEEcHHH
Confidence 46789999999998876666654 333220 0111 0113445 8999999999998765
No 62
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=48.96 E-value=53 Score=28.57 Aligned_cols=51 Identities=16% Similarity=0.116 Sum_probs=41.8
Q ss_pred EEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEecc
Q 044745 674 NFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKG 728 (753)
Q Consensus 674 ~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 728 (753)
+.+.+++|.++..-.|.+....|.- ..|+|..=.+ ++|++.++.|+..+..
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~---YrVrP~~G~I-~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEH---YRVRPVYGFV-DAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTT---EEEECSEEEE-CTTCEEEEEEEECSCC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCc---eEEcCCceEE-CCCCeEEEEEEeCCCC
Confidence 4456889999988999999988865 5568987766 7899999999998753
No 63
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=47.06 E-value=43 Score=30.29 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=42.9
Q ss_pred eEEEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEec
Q 044745 672 TINFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGK 727 (753)
Q Consensus 672 ~~~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 727 (753)
.++-..+++|.++..--|.+...+|.- ..|.|..=.+ +++++..+.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~---y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRR---YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTS---EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCcc---EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 344557899999988999999999865 5568998777 789999999999874
No 64
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=43.73 E-value=5.1 Score=35.17 Aligned_cols=51 Identities=18% Similarity=0.155 Sum_probs=31.8
Q ss_pred EEEEecCCCCeeEEEEEe-cCCceEEEEEEcCeEEEe-eCCcEEEEEEEEEecc
Q 044745 677 RTVTNVGLANSTYKAKIL-QNSKIVSIKVVPESLSFK-SLNEKKSFSVTVTGKG 728 (753)
Q Consensus 677 rtvtn~~~~~~~y~~~~~-~~~g~~~v~v~p~~~~~~-~~~~~~~~~vt~~~~~ 728 (753)
.-+++.+....+..+.++ .|.| ++++++|..++++ ....+++|.|+++...
T Consensus 59 vDLs~l~~G~~~vpv~v~~lp~~-v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 59 VDLTEAGEGSHTVDVEHRGFPGD-LAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp EECTTCCBEEEEEECEEESSCTT-SEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred EECccCCCCeEEEEEEEecCCCC-eEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 344455432223333455 5778 8899999987776 4456678877776654
No 65
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=42.79 E-value=28 Score=28.88 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=27.4
Q ss_pred EEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCCeEEEEEEEEC
Q 044745 701 SIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGAIVSTSLMWSD 743 (753)
Q Consensus 701 ~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~~ 743 (753)
.|++.|..+++ ..|++..++.++.+.++.+. .++|+.
T Consensus 8 ~i~l~~~~~~l-~vG~t~~L~atv~P~~Atnk-----~vtwsS 44 (91)
T 2l04_A 8 GMTVTPASTSV-VKGQSTTLTVAFQPEGVTDK-----SFRAVS 44 (91)
T ss_dssp CEEEECCCEEE-ETTCEEEEEEEECCSSCCCC-----CEEECC
T ss_pred EEEEeCCceEE-EcCCEEEEEEEEeccccCcc-----EEEEEE
Confidence 46778999999 78999988888887764333 356764
No 66
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=42.31 E-value=55 Score=37.97 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=43.1
Q ss_pred CCCCCcEEeeeCC--CCceeEEEEEEEEecCCCCeeEEEEE--ecCCceEEEEEEcC-------eE-EEeeCCcEEEEEE
Q 044745 655 DLNYPSMAAQVSP--GKSFTINFPRTVTNVGLANSTYKAKI--LQNSKIVSIKVVPE-------SL-SFKSLNEKKSFSV 722 (753)
Q Consensus 655 ~ln~ps~~~~~~~--~~~~~~~~~rtvtn~~~~~~~y~~~~--~~~~g~~~v~v~p~-------~~-~~~~~~~~~~~~v 722 (753)
-|-|.+|...++. ......+++.+|||+|+....-.+++ ..|.+ .+. .|. ++ .+ ++||++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~--~~~-~P~k~L~gF~kv~~L-~pGes~~V~~ 672 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKG--KID-KPFQELKAFHKTRLL-NPGESEEVVL 672 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCS--SSC-CCSCEEEEEEECCCB-CTTCEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCC--CCC-CchHHhhcccccccC-CCCCeEEEEE
Confidence 4666676665442 11246889999999998765544443 33322 111 121 23 34 7899999999
Q ss_pred EEEecc
Q 044745 723 TVTGKG 728 (753)
Q Consensus 723 t~~~~~ 728 (753)
+++...
T Consensus 673 ~l~~~~ 678 (721)
T 2x41_A 673 EIPVRD 678 (721)
T ss_dssp EEEGGG
T ss_pred EECHHH
Confidence 998764
No 67
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=40.97 E-value=94 Score=30.00 Aligned_cols=80 Identities=8% Similarity=0.083 Sum_probs=49.2
Q ss_pred CCCCCcEEeeeCCCCceeEEEEEEEEecCCCCeeEEEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCC-
Q 044745 655 DLNYPSMAAQVSPGKSFTINFPRTVTNVGLANSTYKAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGA- 733 (753)
Q Consensus 655 ~ln~ps~~~~~~~~~~~~~~~~rtvtn~~~~~~~y~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~- 733 (753)
.+. ..+-++... + .+.+.+.+++|.|..+-..+- +...-|-..+.. ..-.+ ++||+.+++|++++... .+.
T Consensus 121 ~~~-~~~dfG~i~-g-~~~~~~f~i~N~G~~pL~I~~-v~~scgct~~~~--~~~~i-~PGe~~~i~v~~~~~~~-~g~~ 192 (220)
T 2qsv_A 121 ELS-TYLDMGQLD-G-ETTKAAIEIRNVGAGPLRLHS-VTTRNPALTAVP--DRTEI-KPGGSTLLRIAVDPQVM-KAEG 192 (220)
T ss_dssp ECC-CEEEEEECT-T-SCEEEEEEEEECSSSCEEEEE-EEECSTTEEEEE--SCSEE-CTTCEEEEEEEECHHHH-HHTT
T ss_pred EEE-eEEeeeccC-C-CeEEEEEEEEECCCCCEEEEE-EEeCCCCEeeec--CCccC-CCCCEEEEEEEEecCCC-CCcc
Confidence 344 555555554 3 466677799999988765532 333334244443 33445 79999999999998762 222
Q ss_pred e--EEEEEEEE
Q 044745 734 I--VSTSLMWS 742 (753)
Q Consensus 734 ~--~~G~~~~~ 742 (753)
| ....|+..
T Consensus 193 ~~~~~~~i~v~ 203 (220)
T 2qsv_A 193 WQSIAADISII 203 (220)
T ss_dssp CSEEEEEEEEE
T ss_pred cceeccEEEEE
Confidence 2 45666654
No 68
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=36.65 E-value=21 Score=27.12 Aligned_cols=32 Identities=13% Similarity=0.198 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcC
Q 044745 550 SCPHAAGVAAYVKSFHPDWSPSAIKSAIMTTA 581 (753)
Q Consensus 550 AaP~VAG~aALl~~~~P~ls~~~ik~~L~~TA 581 (753)
..|..--.+..|++.||+++...|+..|...-
T Consensus 5 ~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~ 36 (59)
T 1wgl_A 5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQR 36 (59)
T ss_dssp SSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTT
T ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 33444456778999999999999999998753
No 69
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=35.28 E-value=1.2e+02 Score=33.97 Aligned_cols=78 Identities=12% Similarity=0.034 Sum_probs=47.5
Q ss_pred CCCcEEeeeCCCCceeEEEEEEEEecCCCCeeE-EEEEecCCceEEEEEEcCeEEEeeCCcEEEEEEEEEeccCCCCCeE
Q 044745 657 NYPSMAAQVSPGKSFTINFPRTVTNVGLANSTY-KAKILQNSKIVSIKVVPESLSFKSLNEKKSFSVTVTGKGLPNGAIV 735 (753)
Q Consensus 657 n~ps~~~~~~~~~~~~~~~~rtvtn~~~~~~~y-~~~~~~~~g~~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 735 (753)
..|.+++... .+.+++.+|+|-+.....- ++++..|.+ .+++. ....+ ++|++.+++++|+.+.....+.+
T Consensus 363 ~~~~~~~~~g----~~~~~~~~vtn~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~~~g~y 434 (601)
T 1w8o_A 363 TIPDVALEPG----QQVTVPVAVTNQSGIAVPKPSLQLDASPD-WQVQG--SVEPL-MPGRQAKGQVTITVPAGTTPGRY 434 (601)
T ss_dssp ECCCEEECTT----CEEEEEEEEECCSSSCBSSCEEEEECCTT-SEEEE--EECCB-CTTCEEEEEEEEECCTTCCCEEE
T ss_pred cCccceecCC----ceeEEEEEEECCCceeccCceEEEecCCC-cEEec--ccccc-CCCCceEEEEEEecCCCCCCCcE
Confidence 3466766533 4778888999976532211 334666777 77665 34445 67899999888888764333333
Q ss_pred EEEEEEE
Q 044745 736 STSLMWS 742 (753)
Q Consensus 736 ~G~~~~~ 742 (753)
.=.+.+.
T Consensus 435 ~l~~~~~ 441 (601)
T 1w8o_A 435 RVGATLR 441 (601)
T ss_dssp EEEEEEE
T ss_pred EeeEEEE
Confidence 3334443
No 70
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=34.07 E-value=1.1e+02 Score=36.05 Aligned_cols=163 Identities=14% Similarity=0.103 Sum_probs=87.7
Q ss_pred cceeeccccchhHHHHHHHHHHHhhCCCCC-HHHHHHHHHhcCCCCCCCCCCCCCCccCCCCCCccccC--CCC-eeeeC
Q 044745 540 KFNVVSGTSMSCPHAAGVAAYVKSFHPDWS-PSAIKSAIMTTAWPMNSSKNKDAEFAFGSGHINPVEAV--NPG-LVYET 615 (753)
Q Consensus 540 ~y~~~sGTSmAaP~VAG~aALl~~~~P~ls-~~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al--~~g-lv~~~ 615 (753)
-...++|..++-|-+.-+-|+|..++|.-- ...|-++|.--..|-+..-.. .+...+ .+-+..-. +.+ ..|.+
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T-~p~~~~--d~P~~~~~~~~~g~~~y~e 694 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLS-WPFKLQ--DNPAFLNFKTEFGRVIYGE 694 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSC-BCSSGG--GSTTTTSCSCBTTEEECTT
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCcee-eeCchh--hCCccccCCCCCCceeccC
Confidence 457889999988998889999999999876 577888887766544332111 011111 00000000 011 12332
Q ss_pred Ch-hhHHHHHhcCCCCccccceecCCCcccCCCCCCCCCCCCCCCcEEee--eCCCCceeEEEEEEEEecC-CCCeeEEE
Q 044745 616 FE-QDYIIMLCSMGYDERNIGKISGNISTCPKGSDKATPKDLNYPSMAAQ--VSPGKSFTINFPRTVTNVG-LANSTYKA 691 (753)
Q Consensus 616 ~~-~~~~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~--~~~~~~~~~~~~rtvtn~~-~~~~~y~~ 691 (753)
+. -.|--|.-. +..+ ++ || ..-|-|.+|... ++.-.....+++.+|||+| +....-.+
T Consensus 695 g~~vgYR~y~~~-~~~p----lf---PF----------G~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVv 756 (845)
T 3abz_A 695 DIFVGYRYYEKL-QRKV----AF---PF----------GYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVV 756 (845)
T ss_dssp TTCCTHHHHHHH-TCCC----SB---CT----------TCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEE
T ss_pred CccCCCcchhcC-CCce----ee---cc----------cCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceee
Confidence 21 113222100 0000 00 11 234677777776 5431024688999999999 77665555
Q ss_pred EE--ecCCceEEEEEEcC-------eEEEeeCCcEEEEEEEEE-ec
Q 044745 692 KI--LQNSKIVSIKVVPE-------SLSFKSLNEKKSFSVTVT-GK 727 (753)
Q Consensus 692 ~~--~~~~g~~~v~v~p~-------~~~~~~~~~~~~~~vt~~-~~ 727 (753)
++ ..|.+ .+. .|. ++.+ ++||+++++++++ ..
T Consensus 757 QlYv~~~~~--~~~-~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~ 798 (845)
T 3abz_A 757 QVYFSALNS--KVS-RPVKELKGFEKVHL-EPGEKKTVNIDLELKD 798 (845)
T ss_dssp EEEEEESSC--SSC-CCSCEEEEEEEEEE-CTTCEEEEEEEEEHHH
T ss_pred eeeEeCCCC--Ccc-hhhheeccceeEEE-CCCCEEEEEEEeCChH
Confidence 53 22321 111 121 3455 8999999999999 54
No 71
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=32.25 E-value=2e+02 Score=24.97 Aligned_cols=69 Identities=13% Similarity=0.075 Sum_probs=40.1
Q ss_pred eeEEEEEEEEecCCCCe--------eEEEEEecCCceEEEE---------EEcCeEEEeeCCcEEEEEEEEEeccCCCCC
Q 044745 671 FTINFPRTVTNVGLANS--------TYKAKILQNSKIVSIK---------VVPESLSFKSLNEKKSFSVTVTGKGLPNGA 733 (753)
Q Consensus 671 ~~~~~~rtvtn~~~~~~--------~y~~~~~~~~g~~~v~---------v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~ 733 (753)
....++.||+|.++.+- .|.+.+....| -.|- -.....++ ++||+++|+.+.+....+...
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G-~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~~~~pG~Y 95 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEH-KERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKEVPEPGTY 95 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTC-CEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESSCCCSEEE
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCC-CEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCCCCCCccE
Confidence 47888899999987543 33344444334 2221 01224566 899999999999832222234
Q ss_pred eEEEEEEE
Q 044745 734 IVSTSLMW 741 (753)
Q Consensus 734 ~~~G~~~~ 741 (753)
.+.+++.=
T Consensus 96 tl~a~l~~ 103 (120)
T 3isy_A 96 EVKVTFKG 103 (120)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEe
Confidence 55555543
No 72
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=25.31 E-value=47 Score=30.48 Aligned_cols=32 Identities=13% Similarity=0.091 Sum_probs=26.7
Q ss_pred eeccccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 044745 543 VVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKS 575 (753)
Q Consensus 543 ~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~ 575 (753)
.+.|-| =|+.|-|.+|||++.+-+.+|++|.+
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 334555 37999999999999999999999865
No 73
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=21.45 E-value=45 Score=30.07 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=27.9
Q ss_pred eeeccccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 044745 542 NVVSGTSMSCPHAAGVAAYVKSFHPDWSPSAIKS 575 (753)
Q Consensus 542 ~~~sGTSmAaP~VAG~aALl~~~~P~ls~~~ik~ 575 (753)
..+.|-|= |+.|-|.+|||.+.+-+.+|++|.+
T Consensus 70 l~f~adSD-A~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDSD-AAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEES-SHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecCc-cHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 45556663 7999999999999999999999864
No 74
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=21.08 E-value=3.7e+02 Score=22.95 Aligned_cols=25 Identities=16% Similarity=0.324 Sum_probs=18.4
Q ss_pred eeEEEEEEEEecCCCC-eeEEEEEec
Q 044745 671 FTINFPRTVTNVGLAN-STYKAKILQ 695 (753)
Q Consensus 671 ~~~~~~rtvtn~~~~~-~~y~~~~~~ 695 (753)
...+++-||+|.|... ..+.+.+..
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly~ 44 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLLV 44 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEEE
Confidence 4789999999999653 456666544
Done!