Query 044747
Match_columns 322
No_of_seqs 214 out of 1202
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 06:22:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044747.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044747hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02276 gibberellin 20-oxidas 100.0 1.7E-75 3.7E-80 550.7 28.2 301 7-319 39-353 (361)
2 PLN02216 protein SRG1 100.0 2E-75 4.4E-80 549.0 27.6 294 7-317 51-356 (357)
3 PLN02254 gibberellin 3-beta-di 100.0 5E-75 1.1E-79 545.7 28.2 287 6-318 54-354 (358)
4 PTZ00273 oxidase reductase; Pr 100.0 1E-74 2.2E-79 538.9 28.3 290 6-307 3-311 (320)
5 PLN02485 oxidoreductase 100.0 1.9E-74 4.1E-79 538.8 28.4 296 2-307 1-325 (329)
6 PLN02758 oxidoreductase, 2OG-F 100.0 1.6E-74 3.5E-79 543.7 27.6 296 6-317 50-358 (361)
7 PLN02997 flavonol synthase 100.0 5.2E-74 1.1E-78 532.8 29.1 279 6-307 30-316 (325)
8 PLN03002 oxidoreductase, 2OG-F 100.0 6.1E-74 1.3E-78 534.9 29.4 286 6-309 12-322 (332)
9 PLN02750 oxidoreductase, 2OG-F 100.0 4.9E-74 1.1E-78 538.4 28.6 288 6-307 24-328 (345)
10 PLN03178 leucoanthocyanidin di 100.0 5.1E-74 1.1E-78 540.9 26.4 297 6-318 45-358 (360)
11 PLN02515 naringenin,2-oxogluta 100.0 1.3E-73 2.7E-78 536.2 28.9 282 7-306 36-328 (358)
12 PLN02299 1-aminocyclopropane-1 100.0 3.2E-73 6.9E-78 527.0 27.0 295 1-319 1-309 (321)
13 PLN02904 oxidoreductase 100.0 4.9E-73 1.1E-77 532.5 28.5 293 7-318 50-354 (357)
14 PLN02393 leucoanthocyanidin di 100.0 3E-73 6.4E-78 535.7 26.2 288 5-307 48-347 (362)
15 PLN02912 oxidoreductase, 2OG-F 100.0 5.6E-73 1.2E-77 530.8 27.0 293 6-318 39-345 (348)
16 PLN02365 2-oxoglutarate-depend 100.0 9.6E-73 2.1E-77 520.2 27.6 288 7-320 4-297 (300)
17 PLN02947 oxidoreductase 100.0 4.2E-73 9.2E-78 535.1 25.5 293 6-318 64-371 (374)
18 PLN00417 oxidoreductase, 2OG-F 100.0 2.4E-72 5.3E-77 526.5 28.2 292 6-313 42-343 (348)
19 PLN02639 oxidoreductase, 2OG-F 100.0 4.6E-72 1E-76 523.5 26.7 279 6-307 35-324 (337)
20 PLN02156 gibberellin 2-beta-di 100.0 7.7E-72 1.7E-76 519.4 27.8 278 7-307 25-314 (335)
21 PLN02704 flavonol synthase 100.0 8.5E-72 1.8E-76 521.3 27.4 278 6-306 40-331 (335)
22 COG3491 PcbC Isopenicillin N s 100.0 9.8E-72 2.1E-76 494.7 25.9 289 6-306 3-313 (322)
23 KOG0143 Iron/ascorbate family 100.0 2.4E-71 5.2E-76 513.1 27.7 288 6-309 15-312 (322)
24 PLN02403 aminocyclopropanecarb 100.0 2.6E-68 5.6E-73 489.8 26.1 269 8-306 2-281 (303)
25 PLN02984 oxidoreductase, 2OG-F 100.0 1.6E-67 3.4E-72 491.6 26.9 265 6-306 36-323 (341)
26 PLN03001 oxidoreductase, 2OG-F 100.0 8.6E-61 1.9E-65 431.4 20.0 241 59-314 2-258 (262)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 2.6E-25 5.7E-30 171.7 7.5 95 173-273 2-98 (98)
28 PF14226 DIOX_N: non-haem diox 99.9 5.5E-24 1.2E-28 169.4 9.1 107 9-120 1-116 (116)
29 PLN03176 flavanone-3-hydroxyla 99.8 3.4E-19 7.4E-24 142.0 9.5 79 7-87 36-115 (120)
30 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.7 0.0011 2.3E-08 50.7 2.3 81 175-272 1-100 (100)
31 PRK05467 Fe(II)-dependent oxyg 95.6 0.1 2.2E-06 46.2 9.4 49 210-272 129-177 (226)
32 smart00702 P4Hc Prolyl 4-hydro 94.6 0.27 5.9E-06 41.5 9.0 106 146-272 60-178 (178)
33 PF12851 Tet_JBP: Oxygenase do 89.5 1 2.2E-05 38.1 6.0 73 189-272 84-170 (171)
34 TIGR02466 conserved hypothetic 86.8 6.1 0.00013 34.3 9.3 40 220-271 159-198 (201)
35 PF13759 2OG-FeII_Oxy_5: Putat 80.3 1.8 3.9E-05 32.9 3.0 39 219-269 62-100 (101)
36 PRK15401 alpha-ketoglutarate-d 74.7 15 0.00033 32.2 7.4 79 175-269 118-210 (213)
37 PF07350 DUF1479: Protein of u 67.2 6.7 0.00014 37.9 3.8 54 6-67 47-100 (416)
38 PF13532 2OG-FeII_Oxy_2: 2OG-F 65.7 13 0.00028 31.5 5.1 89 173-269 97-193 (194)
39 PRK08130 putative aldolase; Va 59.5 13 0.00028 32.5 4.0 36 8-50 127-162 (213)
40 PRK08333 L-fuculose phosphate 58.1 14 0.0003 31.4 3.8 36 8-50 120-155 (184)
41 PRK05874 L-fuculose-phosphate 50.5 21 0.00045 31.4 3.8 36 8-50 127-162 (217)
42 TIGR02409 carnitine_bodg gamma 48.3 28 0.00062 33.0 4.7 50 7-65 108-157 (366)
43 PLN00052 prolyl 4-hydroxylase; 44.0 1.2E+02 0.0026 28.3 7.9 48 223-275 206-254 (310)
44 COG2140 Thermophilic glucose-6 42.1 44 0.00096 29.1 4.4 67 172-244 89-157 (209)
45 COG0325 Predicted enzyme with 41.2 2.6E+02 0.0056 24.8 10.3 103 25-177 101-218 (228)
46 PRK06833 L-fuculose phosphate 40.2 33 0.00072 29.9 3.5 36 8-50 124-159 (214)
47 PF00596 Aldolase_II: Class II 38.8 22 0.00048 29.9 2.1 37 7-50 122-159 (184)
48 PRK03634 rhamnulose-1-phosphat 38.7 39 0.00084 30.8 3.7 37 8-51 179-215 (274)
49 PRK08660 L-fuculose phosphate 38.5 47 0.001 28.0 4.1 35 8-50 115-149 (181)
50 PRK08087 L-fuculose phosphate 37.6 46 0.00099 29.0 4.0 36 8-50 122-157 (215)
51 PRK06755 hypothetical protein; 37.5 38 0.00081 29.6 3.3 36 8-50 136-171 (209)
52 PRK00819 RNA 2'-phosphotransfe 36.5 13 0.00028 31.7 0.3 46 209-268 22-70 (179)
53 PF12791 RsgI_N: Anti-sigma fa 34.9 28 0.00061 23.2 1.7 27 215-244 10-36 (56)
54 TIGR02624 rhamnu_1P_ald rhamnu 34.3 58 0.0013 29.6 4.2 36 8-50 177-212 (270)
55 PF11243 DUF3045: Protein of u 31.3 40 0.00088 24.4 2.0 21 31-51 36-56 (89)
56 TIGR02410 carnitine_TMLD trime 30.9 67 0.0015 30.4 4.2 51 8-66 100-150 (362)
57 PRK06357 hypothetical protein; 30.3 77 0.0017 27.7 4.2 36 8-50 130-171 (216)
58 TIGR01086 fucA L-fuculose phos 30.2 57 0.0012 28.4 3.3 23 28-50 134-156 (214)
59 cd00379 Ribosomal_L10_P0 Ribos 28.3 1.8E+02 0.0039 23.5 5.9 39 26-64 3-42 (155)
60 PRK06557 L-ribulose-5-phosphat 27.8 63 0.0014 28.2 3.2 37 8-51 130-168 (221)
61 TIGR03328 salvage_mtnB methylt 27.1 80 0.0017 27.0 3.7 24 27-50 137-163 (193)
62 PRK05834 hypothetical protein; 26.4 81 0.0018 27.1 3.5 23 28-50 136-160 (194)
63 PF01471 PG_binding_1: Putativ 25.9 54 0.0012 21.5 1.9 42 28-69 3-44 (57)
64 TIGR00222 panB 3-methyl-2-oxob 25.1 2.4E+02 0.0051 25.7 6.4 37 24-60 156-192 (263)
65 PF06820 Phage_fiber_C: Putati 24.8 58 0.0013 22.2 1.8 39 188-226 14-61 (64)
66 COG3695 Predicted methylated D 24.7 37 0.0008 26.0 0.9 28 236-267 42-69 (103)
67 PF12368 DUF3650: Protein of u 23.4 39 0.00084 19.5 0.6 18 43-60 9-26 (28)
68 cd05796 Ribosomal_P0_like Ribo 22.9 1.9E+02 0.0042 24.0 5.1 39 26-64 3-42 (163)
69 cd00398 Aldolase_II Class II A 22.7 64 0.0014 27.9 2.2 39 7-50 121-159 (209)
70 KOG2107 Uncharacterized conser 22.5 88 0.0019 26.2 2.8 29 208-236 101-129 (179)
71 PF03460 NIR_SIR_ferr: Nitrite 22.4 1.1E+02 0.0024 21.0 3.0 38 27-64 23-68 (69)
72 TIGR00568 alkb DNA alkylation 21.8 4.2E+02 0.009 22.2 6.9 60 174-239 96-162 (169)
73 cd05797 Ribosomal_L10 Ribosoma 21.6 3E+02 0.0065 22.4 6.0 39 26-64 5-44 (157)
74 PF02668 TauD: Taurine catabol 21.6 1.5E+02 0.0033 25.8 4.5 30 28-57 24-53 (258)
75 PLN02424 ketopantoate hydroxym 21.5 2.8E+02 0.0062 26.1 6.3 30 31-60 185-214 (332)
76 PRK00311 panB 3-methyl-2-oxobu 21.3 2.4E+02 0.0052 25.6 5.7 38 23-60 156-193 (264)
77 cd05795 Ribosomal_P0_L10e Ribo 20.9 2.5E+02 0.0054 23.6 5.4 39 26-64 3-42 (175)
78 PF08823 PG_binding_2: Putativ 20.7 1.4E+02 0.003 21.4 3.2 35 27-61 15-49 (74)
79 COG0289 DapB Dihydrodipicolina 20.6 2.5E+02 0.0055 25.5 5.6 37 28-64 80-117 (266)
80 PF01113 DapB_N: Dihydrodipico 20.4 1.8E+02 0.0039 22.7 4.3 37 28-64 78-115 (124)
81 COG1402 Uncharacterized protei 20.4 3.3E+02 0.0071 24.5 6.3 43 25-67 87-132 (250)
No 1
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=1.7e-75 Score=550.70 Aligned_cols=301 Identities=26% Similarity=0.448 Sum_probs=260.9
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCceee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFEY 85 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY 85 (322)
.+||+|||+.+ ..++.+++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+||
T Consensus 39 ~~iPvIDls~~-~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY 117 (361)
T PLN02276 39 LAVPLIDLGGF-LSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGY 117 (361)
T ss_pred CCCCeEEChhh-cCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccc
Confidence 57999999985 2333445788999999999999999999999999999999999999999999999998754 367899
Q ss_pred eecCC-----CCCceeeeecCCCCCch---hhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044747 86 YGQYT-----IIPLYESLAIDYPDTRN---ATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFES 157 (322)
Q Consensus 86 ~~~~~-----~~d~~E~~~~~~~~~~~---~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~ 157 (322)
.+.+. ..|++|.|.++...... ....+.+|.||...++|+ +.+++|+..|.+|+..||++|+++
T Consensus 118 ~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~ 189 (361)
T PLN02276 118 ASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFG--------KVYQEYCEAMKTLSLKIMELLGIS 189 (361)
T ss_pred CccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHH--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 86543 24799999886422111 111234567887667788 999999999999999999999999
Q ss_pred cCCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEh
Q 044747 158 YGVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMA 236 (322)
Q Consensus 158 Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnv 236 (322)
||++ ++|.+++..+.+.||++|||+++.++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|+||++|||+
T Consensus 190 Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q-d~v~GLQV~-~~g~Wi~V~p~pgalVVNi 267 (361)
T PLN02276 190 LGVDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQ-DQVGGLQVF-VDNKWRSVRPRPGALVVNI 267 (361)
T ss_pred cCCCHHHHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEe-cCCCceEEE-ECCEEEEcCCCCCeEEEEc
Confidence 9999 889988888889999999999988888899999999999999999 899999997 7899999999999999999
Q ss_pred hHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh--ccCCc
Q 044747 237 GDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE--EGKKS 312 (322)
Q Consensus 237 Gd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~--~g~~~ 312 (322)
||+||+||||+||||+|||+. ++..+||||+||++|+. +|.|+++|+++++|++|+++|++||++.+.+. .++..
T Consensus 268 GD~L~~~TNG~~kSt~HRVv~-~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~ 346 (361)
T PLN02276 268 GDTFMALSNGRYKSCLHRAVV-NSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKHYRADMNT 346 (361)
T ss_pred HHHHHHHhCCccccccceeec-CCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhcccchhH
Confidence 999999999999999999998 66789999999999998 99999999999999999999999999987764 34444
Q ss_pred ccccccc
Q 044747 313 ASSIKAY 319 (322)
Q Consensus 313 ~~~~~~~ 319 (322)
++.++.|
T Consensus 347 l~~~~~~ 353 (361)
T PLN02276 347 LQAFSNW 353 (361)
T ss_pred HHHHHHH
Confidence 4554443
No 2
>PLN02216 protein SRG1
Probab=100.00 E-value=2e-75 Score=549.03 Aligned_cols=294 Identities=21% Similarity=0.365 Sum_probs=256.3
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCceee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFEY 85 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY 85 (322)
.+||+|||+.+ .+++ .+.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+||
T Consensus 51 ~~iPvIDls~~--~~~~-~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy 127 (357)
T PLN02216 51 SEIPIIDMKRL--CSST-AMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGF 127 (357)
T ss_pred CCCCeEEChhc--cCCc-cHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCcccc
Confidence 47999999985 2322 2456899999999999999999999999999999999999999999999999654 357788
Q ss_pred eecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 044747 86 YGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGV 160 (322)
Q Consensus 86 ~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl 160 (322)
..... ..|++|.|.+..... ....+|.||+.++.|| +++++|+++|.+|+.+||++|+++|||
T Consensus 128 ~~~~~~~~~~~~d~~e~~~~~~~p~----~~~~~~~WP~~p~~fr--------~~~~~y~~~~~~l~~~ll~~la~~Lgl 195 (357)
T PLN02216 128 GQAFVVSEDQKLDWADMFFLTMQPV----RLRKPHLFPKLPLPFR--------DTLETYSAEVKSIAKILFAKMASALEI 195 (357)
T ss_pred CccccccccccCCceeeeeeeccCc----ccccchhcccchHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 54322 247899887653221 2345688998888899 999999999999999999999999999
Q ss_pred C-CcchhhhcC-cceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhhH
Q 044747 161 E-GYYDSYIGS-VNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGD 238 (322)
Q Consensus 161 ~-~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd 238 (322)
+ ++|.+++.. ..+.||++|||||+.++..+|+++|||+|+||||+|+++++||||+ ++|+|++|+|+||++|||+||
T Consensus 196 ~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD 274 (357)
T PLN02216 196 KPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQIK-KDGKWVSVKPLPNALVVNVGD 274 (357)
T ss_pred CHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeEE-ECCEEEECCCCCCeEEEEcch
Confidence 9 889888765 4578999999999988889999999999999999994469999996 789999999999999999999
Q ss_pred HHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh--ccCCccc
Q 044747 239 ALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE--EGKKSAS 314 (322)
Q Consensus 239 ~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~--~g~~~~~ 314 (322)
+||+||||+|||++|||+. ++.++||||+||++|+. +|.|+++|+++++|++|+++|++||+..++++ .++..++
T Consensus 275 ~L~~~TNG~~kS~~HRVv~-~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~ 353 (357)
T PLN02216 275 ILEIITNGTYRSIEHRGVV-NSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLD 353 (357)
T ss_pred hhHhhcCCeeeccCceeec-CCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHHHHHhcccCCcchhh
Confidence 9999999999999999998 66789999999999998 99999999999999999999999999999884 3565555
Q ss_pred ccc
Q 044747 315 SIK 317 (322)
Q Consensus 315 ~~~ 317 (322)
.+|
T Consensus 354 ~~~ 356 (357)
T PLN02216 354 AMR 356 (357)
T ss_pred hhc
Confidence 554
No 3
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=5e-75 Score=545.73 Aligned_cols=287 Identities=23% Similarity=0.346 Sum_probs=251.4
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCcee
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFE 84 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G 84 (322)
..+||||||+.. .++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+|
T Consensus 54 ~~~iPvIDl~~~----------~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~~~~~G 123 (358)
T PLN02254 54 DESIPVIDLSDP----------NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSPDGVSG 123 (358)
T ss_pred CCCCCeEeCCCH----------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccc
Confidence 357999999751 3689999999999999999999999999999999999999999999998754 35678
Q ss_pred eeecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 044747 85 YYGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYG 159 (322)
Q Consensus 85 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 159 (322)
|..... ..+|+|.|.+..... ....+.||+.+++|| +++++|+++|.+|+.+||++|+++||
T Consensus 124 y~~~~~~~~~~~~~w~e~~~~~~~p~-----~~~~~~wP~~~~~fr--------~~~~~Y~~~~~~L~~~ll~~la~~Lg 190 (358)
T PLN02254 124 YGVARISSFFNKKMWSEGFTIMGSPL-----EHARQLWPQDHTKFC--------DVMEEYQKEMKKLAERLMWLMLGSLG 190 (358)
T ss_pred ccccccccccCCCCceeeEEeecCcc-----ccchhhCCCCchHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 865322 347899998753211 123579999888999 99999999999999999999999999
Q ss_pred CC-Ccchhhh-----cCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEE
Q 044747 160 VE-GYYDSYI-----GSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFI 233 (322)
Q Consensus 160 l~-~~~~~~~-----~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~v 233 (322)
|+ ++|...+ ..+.+.||++|||||+.++..+|+++|||+|+||||+| |+++||||+..+|+|++|+|+||++|
T Consensus 191 l~~~~~~~~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Q-d~v~GLQV~~~~~~Wi~V~p~pgalV 269 (358)
T PLN02254 191 ITEEDIKWAGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQ-SNTSGLQVFREGVGWVTVPPVPGSLV 269 (358)
T ss_pred CCHHHHHHHhhcccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEec-CCCCCceEECCCCEEEEcccCCCCEE
Confidence 99 7886654 45668999999999998888999999999999999999 88999999877678999999999999
Q ss_pred eEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhhccCC
Q 044747 234 VMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEGKK 311 (322)
Q Consensus 234 VnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~g~~ 311 (322)
||+||+||+||||+|||++|||+. ++..+||||+||++|+. +|.|+++|+++++|++|+++|++||+..+++...+
T Consensus 270 VNiGD~lq~~SNg~~kS~~HRVv~-~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~- 347 (358)
T PLN02254 270 VNVGDLLHILSNGRFPSVLHRAVV-NKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPLYRSVTWKEYLATKAKHFNK- 347 (358)
T ss_pred EEhHHHHHHHhCCeeccccceeec-CCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcccCCcCHHHHHHHHHHhhhh-
Confidence 999999999999999999999999 67789999999999998 99999999999999999999999999999875444
Q ss_pred ccccccc
Q 044747 312 SASSIKA 318 (322)
Q Consensus 312 ~~~~~~~ 318 (322)
..+.+++
T Consensus 348 ~~~~~~~ 354 (358)
T PLN02254 348 ALSLIRN 354 (358)
T ss_pred hhhhhhc
Confidence 4445443
No 4
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=1e-74 Score=538.91 Aligned_cols=290 Identities=23% Similarity=0.343 Sum_probs=255.7
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC--CCce
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST--KPYF 83 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~ 83 (322)
..+||||||+.+ ..++.+++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+
T Consensus 3 ~~~iPvIDl~~~-~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~ 81 (320)
T PTZ00273 3 RASLPVIDVSPL-FGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHR 81 (320)
T ss_pred CCCCCEEecHHh-cCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCC
Confidence 457999999985 2333456788999999999999999999999999999999999999999999999998643 3578
Q ss_pred eeeecCC-------CCCceeeeecCCCCC--ch----hhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHH
Q 044747 84 EYYGQYT-------IIPLYESLAIDYPDT--RN----ATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMV 150 (322)
Q Consensus 84 GY~~~~~-------~~d~~E~~~~~~~~~--~~----~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~l 150 (322)
||.+.+. ..|++|+|.++.... .. ......+|.||+.+|+|+ +++++|+++|.+|+.+|
T Consensus 82 GY~~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr--------~~~~~y~~~~~~l~~~l 153 (320)
T PTZ00273 82 GYGAFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPTQVEGWM--------ELMETHYRDMQALALVL 153 (320)
T ss_pred CCCCccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCCCcchHHH--------HHHHHHHHHHHHHHHHH
Confidence 9987542 247899998863211 11 111235789999888999 99999999999999999
Q ss_pred HHHHHHHcCCC-CcchhhhcCcceeeecccccCCCC-CCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCC
Q 044747 151 TRMLFESYGVE-GYYDSYIGSVNYLLRYFKYRAPEP-NETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPS 228 (322)
Q Consensus 151 l~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~-~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~ 228 (322)
+++|+++||++ ++|.+.+..+.+.||++|||+++. ++..+|+++|||+|+||||+| |.++||||++++|+|++|+|.
T Consensus 154 l~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~q-d~~~GLqV~~~~g~Wi~V~p~ 232 (320)
T PTZ00273 154 LRALALAIGLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQ-DSVGGLQVRNLSGEWMDVPPL 232 (320)
T ss_pred HHHHHHHhCcCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEec-CCCCceEEECCCCCEEeCCCC
Confidence 99999999999 889888888889999999999976 356889999999999999999 889999999889999999999
Q ss_pred CCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhh
Q 044747 229 PSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQS 306 (322)
Q Consensus 229 ~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~ 306 (322)
||++|||+||+||+||||+||||+|||+. + ..+||||+||++|+. +|.|+++|+++++|++|+|+|++||+..+++
T Consensus 233 pg~lvVNvGD~l~~~TnG~~kSt~HRVv~-~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~ 310 (320)
T PTZ00273 233 EGSFVVNIGDMMEMWSNGRYRSTPHRVVN-T-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFA 310 (320)
T ss_pred CCeEEEEHHHHHHHHHCCeeeCCCccccC-C-CCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHHHHHHHHH
Confidence 99999999999999999999999999987 3 468999999999998 9999999999999999999999999999987
Q ss_pred h
Q 044747 307 E 307 (322)
Q Consensus 307 ~ 307 (322)
.
T Consensus 311 ~ 311 (320)
T PTZ00273 311 E 311 (320)
T ss_pred H
Confidence 4
No 5
>PLN02485 oxidoreductase
Probab=100.00 E-value=1.9e-74 Score=538.79 Aligned_cols=296 Identities=22% Similarity=0.265 Sum_probs=252.6
Q ss_pred CCCCCCCCCEEEcCCCCCcC-------CchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHh
Q 044747 2 GSQTKSKIPVIDLSKQDLKS-------GTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKV 74 (322)
Q Consensus 2 ~s~~~~~iPvIDls~l~~~~-------~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~ 74 (322)
=+.++..||||||+.+. .. .+.++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+
T Consensus 1 ~~~~~~~iPvIDl~~l~-~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~ 79 (329)
T PLN02485 1 MATDFKSIPVIDISPLV-AKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKL 79 (329)
T ss_pred CCCCCCCCCeEechhhh-ccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 04668899999999852 21 12346778999999999999999999999999999999999999999999999
Q ss_pred hcCCC--CCceeeeecCC-----CCCceeeeecCCCCCch-----hhhcccCCCCCCccccccccCCCChHHHHHHHHHH
Q 044747 75 KNTST--KPYFEYYGQYT-----IIPLYESLAIDYPDTRN-----ATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSEL 142 (322)
Q Consensus 75 ~~~~~--~~~~GY~~~~~-----~~d~~E~~~~~~~~~~~-----~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~ 142 (322)
++... ...+||.+.+. ..|++|.|.+....... ......+|.||+.+|+|+ +++++|+++
T Consensus 80 ~~~~~~~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr--------~~~~~y~~~ 151 (329)
T PLN02485 80 KIKMTPAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFK--------ALMEEYIKL 151 (329)
T ss_pred hhcccCCCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHH--------HHHHHHHHH
Confidence 98643 35689986543 24788988775321110 011235789999888999 999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC-Ccchhh-hcCcceeeecccccCCCC----CCCCCccccccCCCCceEEeeCCCCCceEEE
Q 044747 143 VVELDKMVTRMLFESYGVE-GYYDSY-IGSVNYLLRYFKYRAPEP----NETKMGLTPHTDKTMTSIIHQINHINGLQVQ 216 (322)
Q Consensus 143 ~~~l~~~ll~~l~~~Lgl~-~~~~~~-~~~~~~~lr~~~Yp~~~~----~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~ 216 (322)
|.+++.+||++||++||++ ++|.+. ...+.+.||++|||+++. ++..+|+++|||+|+||||+|+++++||||+
T Consensus 152 ~~~l~~~ll~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~ 231 (329)
T PLN02485 152 CTDLSRKILRGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVR 231 (329)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEE
Confidence 9999999999999999999 778654 445678899999999875 4567999999999999999993358999999
Q ss_pred cCCCCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCC--CCCCCCC
Q 044747 217 AKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGD--ETQPLKY 292 (322)
Q Consensus 217 ~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~--~~~p~~y 292 (322)
+++|+|++|+|.||++|||+||+||+||||+||||+|||+. +...+||||+||++|+. +|.|+++|++ +++|++|
T Consensus 232 ~~~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~-~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y 310 (329)
T PLN02485 232 NLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVIN-NSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVF 310 (329)
T ss_pred cCCCcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecC-CCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCC
Confidence 89999999999999999999999999999999999999998 55678999999999998 9999999987 6678999
Q ss_pred CCccHHHHHHHHhhh
Q 044747 293 KPFDHFGFLHFNQSE 307 (322)
Q Consensus 293 ~~~t~~e~~~~~~~~ 307 (322)
+++|++||+..+++.
T Consensus 311 ~~~t~~e~~~~~~~~ 325 (329)
T PLN02485 311 KRVVYGEHLVNKVLT 325 (329)
T ss_pred CcEeHHHHHHHHHHH
Confidence 999999999999874
No 6
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.6e-74 Score=543.67 Aligned_cols=296 Identities=25% Similarity=0.405 Sum_probs=257.6
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCcee
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFE 84 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G 84 (322)
..+||+|||+.+ ..++.+++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+|
T Consensus 50 ~~~IPvIDl~~l-~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G 128 (361)
T PLN02758 50 PDDIPVIDFSRL-VKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQG 128 (361)
T ss_pred CCCCCeEEchhh-cCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCccc
Confidence 457999999985 2333345677899999999999999999999999999999999999999999999998754 35789
Q ss_pred eeecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 044747 85 YYGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYG 159 (322)
Q Consensus 85 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 159 (322)
|..... ..|++|.|.++.... .....|.||+.++.|| +.+++|+++|.+|+..||++|+++||
T Consensus 129 Y~~~~~~~~~~~~d~~e~~~~~~~p~----~~~~~~~WP~~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~Lg 196 (361)
T PLN02758 129 YGQAFVFSEDQKLDWCNMFALGVEPH----FIRNPKLWPTKPARFS--------ETLEVYSREIRELCQRLLKYIAMTLG 196 (361)
T ss_pred cCcccccccccccCeeEEEEeeccCc----cccccccCccccHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 965321 247889887763221 1124689999888999 99999999999999999999999999
Q ss_pred CC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCC--CCCceEEEcCCCCeEEcCCCCCeEEeEh
Q 044747 160 VE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQIN--HINGLQVQAKDGEWIDVEPSPSSFIVMA 236 (322)
Q Consensus 160 l~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d--~~~GLqv~~~~g~W~~V~p~~g~~vVnv 236 (322)
++ ++|.+.+..+.+.||++|||+|+.++..+|+++|||+|+||||+| | +++||||+ ++|+|++|+|.||++|||+
T Consensus 197 l~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~v~GLQV~-~~g~Wi~V~p~pgalVVNi 274 (361)
T PLN02758 197 LKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQ-GKGSCVGLQIL-KDNTWVPVHPVPNALVINI 274 (361)
T ss_pred CChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEe-CCCCCCCeeee-eCCEEEeCCCCCCeEEEEc
Confidence 99 889888888889999999999988888999999999999999999 6 48999996 4799999999999999999
Q ss_pred hHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhhc--cCCc
Q 044747 237 GDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSEE--GKKS 312 (322)
Q Consensus 237 Gd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~--g~~~ 312 (322)
||+||+||||+|||++|||+. ++.++|||++||++|+. +|.|+++|+++++|++|++++++||+..+++.. +++.
T Consensus 275 GD~L~~~SNG~~kS~~HRVv~-~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~ 353 (361)
T PLN02758 275 GDTLEVLTNGKYKSVEHRAVT-NKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKT 353 (361)
T ss_pred cchhhhhcCCeeecccceeec-CCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCcCCCccHHHHHHHHHhcccCchhh
Confidence 999999999999999999998 66788999999999998 999999999999999999999999999998843 4444
Q ss_pred ccccc
Q 044747 313 ASSIK 317 (322)
Q Consensus 313 ~~~~~ 317 (322)
.+.++
T Consensus 354 ~~~~~ 358 (361)
T PLN02758 354 LEFAK 358 (361)
T ss_pred hhhhc
Confidence 44444
No 7
>PLN02997 flavonol synthase
Probab=100.00 E-value=5.2e-74 Score=532.76 Aligned_cols=279 Identities=23% Similarity=0.362 Sum_probs=247.0
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCceee
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEY 85 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY 85 (322)
..+||||||+.+ +++.++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++......+||
T Consensus 30 ~~~IPvIDls~~-------~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~GY 102 (325)
T PLN02997 30 AVDVPVVDLSVS-------DEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEGY 102 (325)
T ss_pred CCCCCeEECCCC-------CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCcccc
Confidence 448999999863 2457899999999999999999999999999999999999999999999998766668899
Q ss_pred eecCC--CCCceeeeecCC-CCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-
Q 044747 86 YGQYT--IIPLYESLAIDY-PDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVE- 161 (322)
Q Consensus 86 ~~~~~--~~d~~E~~~~~~-~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~- 161 (322)
..... ..+++|.+.... +.. ....|.||+.+|+|| +++++|++.|.+|+.+||++|+++||++
T Consensus 103 ~~~~~~~~~d~~e~~~~~~~p~~-----~~~~n~wP~~~~~fr--------~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~ 169 (325)
T PLN02997 103 KRNYLGGINNWDEHLFHRLSPPS-----IINYKYWPKNPPQYR--------EVTEEYTKHMKRLTEKILGWLSEGLGLPR 169 (325)
T ss_pred CcccccCCCCccceeEeeecCcc-----ccccccCCCCcchHH--------HHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 76532 246777664321 111 113478999888999 9999999999999999999999999999
Q ss_pred CcchhhhcC--cceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhhHH
Q 044747 162 GYYDSYIGS--VNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDA 239 (322)
Q Consensus 162 ~~~~~~~~~--~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~ 239 (322)
++|.+.+.. ..+.||++|||+++.++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|.||++|||+||+
T Consensus 170 ~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q-d~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~ 247 (325)
T PLN02997 170 ETFTQSIGGETAEYVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIP-NEVPGLQAF-KDEQWLDLNYINSAVVVIIGDQ 247 (325)
T ss_pred HHHHHHhcCCcccceeeeecCCCCCCcccccCccCccCCCceEEEec-CCCCCEEEe-ECCcEEECCCCCCeEEEEechH
Confidence 888887753 345899999999988778899999999999999999 899999997 5799999999999999999999
Q ss_pred HHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh
Q 044747 240 LMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE 307 (322)
Q Consensus 240 l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~ 307 (322)
||+||||+||||+|||+. +....|||++||++|+. +|.|+++|+++++|++|++++++||+..|+++
T Consensus 248 Le~~TNG~~kSt~HRVv~-~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~~ 316 (325)
T PLN02997 248 LMRMTNGRFKNVLHRAKT-DKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQKIRG 316 (325)
T ss_pred HHHHhCCccccccceeeC-CCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHhh
Confidence 999999999999999998 66778999999999998 99999999999999999999999999999884
No 8
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=6.1e-74 Score=534.85 Aligned_cols=286 Identities=21% Similarity=0.359 Sum_probs=249.2
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCceee
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEY 85 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY 85 (322)
..+||+|||+.. ++..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++......+||
T Consensus 12 ~~~iP~IDl~~~-------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~GY 84 (332)
T PLN03002 12 VSSLNCIDLAND-------DLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRGY 84 (332)
T ss_pred CCCCCEEeCCch-------hHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCCc
Confidence 558999999851 2456899999999999999999999999999999999999999999999999766668999
Q ss_pred eecCC---------CCCceeeeecCCCCCch----hhhcccCCCCCCc--cccccccCCCChHHHHHHHHHHHHHHHHHH
Q 044747 86 YGQYT---------IIPLYESLAIDYPDTRN----ATQSFTNLMWPAE--MIAFGMICPYSLLESSLSMSELVVELDKMV 150 (322)
Q Consensus 86 ~~~~~---------~~d~~E~~~~~~~~~~~----~~~~~~~~~wP~~--~p~f~~~~p~~~~~~~~~y~~~~~~l~~~l 150 (322)
.+.+. ..|++|.|.++...... ....+.+|.||+. .|+|| +++++|+++|.+|+..|
T Consensus 85 ~~~~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr--------~~~~~y~~~~~~l~~~l 156 (332)
T PLN03002 85 TPVLDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWR--------ETMEKYHQEALRVSMAI 156 (332)
T ss_pred CcccccccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHH--------HHHHHHHHHHHHHHHHH
Confidence 86432 14899999887421111 1123457899974 67888 99999999999999999
Q ss_pred HHHHHHHcCCC-Ccchh--hhcCcceeeecccccCCCCCC-CCCccccccCCCCceEEeeCCCCCceEEEcC----CCCe
Q 044747 151 TRMLFESYGVE-GYYDS--YIGSVNYLLRYFKYRAPEPNE-TKMGLTPHTDKTMTSIIHQINHINGLQVQAK----DGEW 222 (322)
Q Consensus 151 l~~l~~~Lgl~-~~~~~--~~~~~~~~lr~~~Yp~~~~~~-~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~----~g~W 222 (322)
|++||++||++ ++|.+ .+..+.+.||++|||+++.++ ..+|+++|||+|+||||+| |+++||||+.. +|+|
T Consensus 157 l~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~q-d~v~GLQV~~~~~~~~g~W 235 (332)
T PLN03002 157 AKLLALALDLDVGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLAT-DGVMGLQICKDKNAMPQKW 235 (332)
T ss_pred HHHHHHHcCCChHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEee-CCCCceEEecCCCCCCCcE
Confidence 99999999999 88875 455667899999999987654 5789999999999999999 88999999764 4789
Q ss_pred EEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHH
Q 044747 223 IDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGF 300 (322)
Q Consensus 223 ~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~ 300 (322)
++|+|+||++|||+||+||+||||+||||+|||+. ++ .+||||+||++|+. +|.|+++|+++++|++|+++|++||
T Consensus 236 i~Vpp~pg~~VVNiGD~L~~wTng~~kSt~HRVv~-~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~ 313 (332)
T PLN03002 236 EYVPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLG-NG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTY 313 (332)
T ss_pred EECCCCCCeEEEEHHHHHHHHhCCeeECcCCeecC-CC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHH
Confidence 99999999999999999999999999999999998 43 57999999999998 9999999999999999999999999
Q ss_pred HHHHhhhcc
Q 044747 301 LHFNQSEEG 309 (322)
Q Consensus 301 ~~~~~~~~g 309 (322)
+..+++...
T Consensus 314 l~~~~~~~~ 322 (332)
T PLN03002 314 LTQRYEETH 322 (332)
T ss_pred HHHHHHHHh
Confidence 999998543
No 9
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.9e-74 Score=538.42 Aligned_cols=288 Identities=25% Similarity=0.410 Sum_probs=252.7
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC-Ccee
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK-PYFE 84 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~G 84 (322)
..+||+|||+.+ ++.++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ..+|
T Consensus 24 ~~~iPvIDls~~----~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~G 99 (345)
T PLN02750 24 DEEIPVIDLSVS----TSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRDEVNPMG 99 (345)
T ss_pred CCCCCeEECCCC----CcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccC
Confidence 357999999973 23457788999999999999999999999999999999999999999999999986543 4579
Q ss_pred eeecCC---CCCceeeeecCCCCC--c------hh-hhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHH
Q 044747 85 YYGQYT---IIPLYESLAIDYPDT--R------NA-TQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTR 152 (322)
Q Consensus 85 Y~~~~~---~~d~~E~~~~~~~~~--~------~~-~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~ 152 (322)
|.+... ..|++|.|.+..... . .. .....+|.||+.+++|| +++++|++.|.+|+..||+
T Consensus 100 Y~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr--------~~~~~y~~~~~~l~~~ll~ 171 (345)
T PLN02750 100 YHDSEHTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQNPSHFR--------ELCQEYARQVEKLAFKLLE 171 (345)
T ss_pred cCcccccccCCCceeEEEEeecccccccccccccccccccccccCCCCcHHHH--------HHHHHHHHHHHHHHHHHHH
Confidence 964321 248999998753210 0 00 00112589999888899 9999999999999999999
Q ss_pred HHHHHcCCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEc-CCCCeEEcCCCCC
Q 044747 153 MLFESYGVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQA-KDGEWIDVEPSPS 230 (322)
Q Consensus 153 ~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~-~~g~W~~V~p~~g 230 (322)
+|+++||++ ++|.+++..+.+.||++||||++.++..+|+++|||+|+||||+| |+++||||+. ++|+|++|+|.||
T Consensus 172 ~la~~Lgl~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~~~g~Wi~V~p~pg 250 (345)
T PLN02750 172 LISLSLGLPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQ-DDVGGLQISRRSDGEWIPVKPIPD 250 (345)
T ss_pred HHHHHcCCCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEec-CCCCceEEeecCCCeEEEccCCCC
Confidence 999999999 889998888889999999999987777899999999999999999 8999999975 6899999999999
Q ss_pred eEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh
Q 044747 231 SFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE 307 (322)
Q Consensus 231 ~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~ 307 (322)
++|||+||+||+||||+||||+|||+. +...+||||+||++|+. +|.|+++|+++++|++|+|+|++||+..++..
T Consensus 251 ~~vVNiGD~L~~~Tng~~~St~HRVv~-~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e~~~~~~~~ 328 (345)
T PLN02750 251 AFIINIGNCMQVWTNDLYWSAEHRVVV-NSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGKFFASRNRS 328 (345)
T ss_pred eEEEEhHHHHHHHhCCeeecccceecc-CCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccHHHHHHHHHhc
Confidence 999999999999999999999999998 66788999999999998 99999999999999999999999999988874
No 10
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=5.1e-74 Score=540.85 Aligned_cols=297 Identities=20% Similarity=0.301 Sum_probs=254.6
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC---Cc
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK---PY 82 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~ 82 (322)
...||+|||+.+. .++.++|..++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ..
T Consensus 45 ~~~iPvIDls~~~-~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~ 123 (360)
T PLN03178 45 GPQVPVVDLSNIE-SDDEVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAA 123 (360)
T ss_pred CCCCCEEEchhhc-CCChhhHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCc
Confidence 4579999999852 3333457889999999999999999999999999999999999999999999999997542 47
Q ss_pred eeeeecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044747 83 FEYYGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFES 157 (322)
Q Consensus 83 ~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~ 157 (322)
+||..... ..+++|.+....... .....|.||+.+|+|| +++++|+++|.+|+..||++|+++
T Consensus 124 ~Gy~~~~~~~~~~~~d~~e~~~~~~~p~----~~~~~n~wP~~~p~fr--------~~~~~y~~~~~~l~~~ll~~la~~ 191 (360)
T PLN03178 124 QGYGSKLAANASGQLEWEDYFFHLTLPE----DKRDPSLWPKTPPDYV--------PATSEYSRSLRSLATKLLAILSLG 191 (360)
T ss_pred cccccccccccccccchhHhhccccCCc----cccccccCCCCchHHH--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89954321 135556554321100 1123679999888999 999999999999999999999999
Q ss_pred cCCC-Ccchhhhc---CcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEE
Q 044747 158 YGVE-GYYDSYIG---SVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFI 233 (322)
Q Consensus 158 Lgl~-~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~v 233 (322)
||++ ++|.+.+. ...+.||++|||+++.++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|.||++|
T Consensus 192 Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~q-d~v~GLQV~-~~g~Wi~V~p~pg~lv 269 (360)
T PLN03178 192 LGLPEDRLEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFILH-NMVPGLQVL-YEGKWVTAKCVPDSIV 269 (360)
T ss_pred cCCCHHHHHHHhcCcccchhhhheeccCCCCCCccccCcCCccCCCceEEEee-CCCCceeEe-ECCEEEEcCCCCCeEE
Confidence 9999 88988776 3457899999999988888999999999999999999 899999997 5899999999999999
Q ss_pred eEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--c-eeCCCCCCCCCCCCCCCCccHHHHHHHHhhh--c
Q 044747 234 VMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--V-VDIPKELGDETQPLKYKPFDHFGFLHFNQSE--E 308 (322)
Q Consensus 234 VnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~-i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~--~ 308 (322)
||+||+||+||||+||||+|||+. ++..+||||+||++|+. + +.|+++|+++++|++|+|+|++||+..++.. .
T Consensus 270 VNiGD~L~~~TNG~~kSt~HRVv~-~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~~~~~~~~ 348 (360)
T PLN03178 270 VHIGDTLEILSNGRYKSILHRGLV-NKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLFKKPQ 348 (360)
T ss_pred EEccHHHHHHhCCccccccceeec-CCCCCeEEEEEEecCCcccccccCcHHHcCCCCcccCCCccHHHHHHHHHhcccC
Confidence 999999999999999999999998 56678999999999986 4 5999999999999999999999999998883 4
Q ss_pred cCCccccccc
Q 044747 309 GKKSASSIKA 318 (322)
Q Consensus 309 g~~~~~~~~~ 318 (322)
++++++++++
T Consensus 349 ~~~~~~~~~~ 358 (360)
T PLN03178 349 DERNIDAADI 358 (360)
T ss_pred cchhHhHHhc
Confidence 6777777765
No 11
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=1.3e-73 Score=536.25 Aligned_cols=282 Identities=21% Similarity=0.322 Sum_probs=248.1
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCceee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFEY 85 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY 85 (322)
.+||+|||+.+ .+++++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...+||
T Consensus 36 ~~iPvIDls~~--~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy 113 (358)
T PLN02515 36 DEIPVISLAGI--DEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGGF 113 (358)
T ss_pred CCCCEEEChhc--cCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhCcCCCCccCc
Confidence 36999999985 344556788999999999999999999999999999999999999999999999998654 345799
Q ss_pred eecCC-----CCCceeeeecC-CCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 044747 86 YGQYT-----IIPLYESLAID-YPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYG 159 (322)
Q Consensus 86 ~~~~~-----~~d~~E~~~~~-~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 159 (322)
..... ..|++|.|.+. .+.. ....|.||+.+|+|| +++++|+++|.+|+..||++|+++||
T Consensus 114 ~~~~~~~~~~~~d~kE~~~~~~~~~~-----~~~~n~WP~~~~~fr--------~~~~~y~~~~~~L~~~ll~~la~~Lg 180 (358)
T PLN02515 114 IVSSHLQGEAVQDWREIVTYFSYPVR-----TRDYSRWPDKPEGWR--------AVTEEYSEKLMGLACKLLEVLSEAMG 180 (358)
T ss_pred ccccccccccccCceeeeccccCccc-----ccccccccccchHHH--------HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 63221 25889988654 2211 112478999888999 99999999999999999999999999
Q ss_pred CC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCC-CeEEcCCCCCeEEeEhh
Q 044747 160 VE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDG-EWIDVEPSPSSFIVMAG 237 (322)
Q Consensus 160 l~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g-~W~~V~p~~g~~vVnvG 237 (322)
++ ++|.+.+....+.+|++|||+++.++..+|+++|||+|+||||+| |+++||||+.++| +|++|+|.||++|||+|
T Consensus 181 l~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Q-d~v~GLQV~~~~~~~Wi~Vpp~pgalVVNiG 259 (358)
T PLN02515 181 LEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAFVVNLG 259 (358)
T ss_pred CChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEec-CCCCceEEEECCCCeEEECCCCCCeEEEEcc
Confidence 99 889888877778999999999988788899999999999999999 8999999987665 79999999999999999
Q ss_pred HHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhh
Q 044747 238 DALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQS 306 (322)
Q Consensus 238 d~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~ 306 (322)
|+||+||||+||||+|||+. ++..+||||+||++|+. +|.|++ ++++++|++|+++|++||+..+++
T Consensus 260 D~L~~~TNG~~kSt~HRVv~-~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p~~y~~~t~~eyl~~~~~ 328 (358)
T PLN02515 260 DHGHYLSNGRFKNADHQAVV-NSNCSRLSIATFQNPAPDATVYPLK-VREGEKPILEEPITFAEMYRRKMS 328 (358)
T ss_pred HHHHHHhCCeeeeecceEEC-CCCCCEEEEEEEecCCCCCEEECCC-cCCCCCCCcCCCcCHHHHHHHHHh
Confidence 99999999999999999998 66788999999999998 999987 667778999999999999999976
No 12
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=3.2e-73 Score=527.02 Aligned_cols=295 Identities=23% Similarity=0.306 Sum_probs=250.9
Q ss_pred CCCCCCCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC
Q 044747 1 MGSQTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK 80 (322)
Q Consensus 1 m~s~~~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 80 (322)
|| ++.+||+|||+.+ . ++++.+++++|++||++||||||+|||||.++++++++++++||+||.|+|+++...
T Consensus 1 ~~--~~~~iPvIDls~~--~--~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~- 73 (321)
T PLN02299 1 MA--KMESFPVIDMEKL--N--GEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVA- 73 (321)
T ss_pred CC--CCCCCCEEECcCC--C--cccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccC-
Confidence 65 4567999999984 2 234667899999999999999999999999999999999999999999999997532
Q ss_pred CceeeeecCC---CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044747 81 PYFEYYGQYT---IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFES 157 (322)
Q Consensus 81 ~~~GY~~~~~---~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~ 157 (322)
.+||.+... ..|++|.|.+..... -..+.||+.++.|+ +.+++|++.|.+|+.+||++|+++
T Consensus 74 -~~gy~~~~~~~~~~d~ke~~~~~~~~~------~~~~~wP~~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~ 138 (321)
T PLN02299 74 -SKGLEGVQTEVEDLDWESTFFLRHLPE------SNLADIPDLDDEYR--------KVMKDFALELEKLAEELLDLLCEN 138 (321)
T ss_pred -CCCcccccccCCCcCHHHHcccccCCc------cccccCccccHHHH--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357755432 357889887752111 12367998888999 999999999999999999999999
Q ss_pred cCCC-Ccchhhhc---CcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEE
Q 044747 158 YGVE-GYYDSYIG---SVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFI 233 (322)
Q Consensus 158 Lgl~-~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~v 233 (322)
||++ ++|.+.+. ...+.||++||||++.++...|+++|||+|+||||+|+++++||||+ ++|+|++|+|.||++|
T Consensus 139 Lgl~~~~f~~~~~~~~~~~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pg~lv 217 (321)
T PLN02299 139 LGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWVDVPPMRHSIV 217 (321)
T ss_pred cCCCHHHHHHHhcCCCCccceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcc-cCCeEEECCCCCCeEE
Confidence 9999 88887764 24567999999999887778899999999999999993359999996 7899999999999999
Q ss_pred eEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCC--CCCCCCCccHHHHHHHHhhhc-
Q 044747 234 VMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDET--QPLKYKPFDHFGFLHFNQSEE- 308 (322)
Q Consensus 234 VnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~--~p~~y~~~t~~e~~~~~~~~~- 308 (322)
||+||+||+||||+|||++|||+. +...+||||+||++|+. +|.|+++|++++ +|++|+|++++||+..++++.
T Consensus 218 VNiGD~l~~~Tng~~kS~~HRVv~-~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~ 296 (321)
T PLN02299 218 VNLGDQLEVITNGKYKSVMHRVVA-QTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKF 296 (321)
T ss_pred EEeCHHHHHHhCCceecccceeec-CCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHccc
Confidence 999999999999999999999998 56678999999999998 999999999876 589999999999999998743
Q ss_pred -cC-Ccccccccc
Q 044747 309 -GK-KSASSIKAY 319 (322)
Q Consensus 309 -g~-~~~~~~~~~ 319 (322)
++ ..++.+++.
T Consensus 297 ~~~~~~~~~~~~~ 309 (321)
T PLN02299 297 QAKEPRFEAMKAM 309 (321)
T ss_pred CCccchhhhhhcc
Confidence 22 345555543
No 13
>PLN02904 oxidoreductase
Probab=100.00 E-value=4.9e-73 Score=532.48 Aligned_cols=293 Identities=22% Similarity=0.310 Sum_probs=249.5
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC--Ccee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK--PYFE 84 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~G 84 (322)
..||+|||+.+ .+ .+.|..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ...|
T Consensus 50 ~~iPvIDls~~--~~-~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~ 126 (357)
T PLN02904 50 ITLPVIDLSLL--HD-PLLRSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVR 126 (357)
T ss_pred CCCCEEECccc--CC-chhHHHHHHHHHHHHHHCceEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCccc
Confidence 57999999975 22 3457789999999999999999999999999999999999999999999999986432 2234
Q ss_pred eeecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 044747 85 YYGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYG 159 (322)
Q Consensus 85 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 159 (322)
|..... ..++++.+....... . ...|.||+.+|+|| +++++|+++|.+|+.+||++||++||
T Consensus 127 ~g~~~~~~~~~~~~~~d~~~~~~~p~----~-~~~n~WP~~~p~fr--------~~~~~y~~~~~~l~~~ll~~la~~Lg 193 (357)
T PLN02904 127 YGTSLNHSTDRVHYWRDFIKHYSHPL----S-KWINLWPSNPPCYK--------EKVGKYAEATHVLHKQLIEAISESLG 193 (357)
T ss_pred ccccccccCCCCCCceEEeeeccCCc----c-cccccCcccchHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 432111 113454443221100 0 12578998889999 99999999999999999999999999
Q ss_pred CC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhhH
Q 044747 160 VE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGD 238 (322)
Q Consensus 160 l~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd 238 (322)
++ ++|.+.+....+.||++|||||+.++..+|+++|||+|+||||+| | .+||||+.++|+|++|+|.||++|||+||
T Consensus 194 l~~~~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~q-d-~~GLQV~~~~g~Wi~V~p~pgalVVNiGD 271 (357)
T PLN02904 194 LEKNYLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQ-S-SQGLQIMDCNKNWVCVPYIEGALIVQLGD 271 (357)
T ss_pred CCHHHHHHHhcCcccEEEeeecCCCCCcccccCCcCccCCCceEEEec-C-CCeeeEEeCCCCEEECCCCCCeEEEEccH
Confidence 99 889888887788999999999988888999999999999999999 6 58999998899999999999999999999
Q ss_pred HHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhhc--cCCccc
Q 044747 239 ALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSEE--GKKSAS 314 (322)
Q Consensus 239 ~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~--g~~~~~ 314 (322)
+||+||||+||||+|||+. ++..+||||+||+.|+. +|.|+++++++++|++|+++||+||+..++++. +++..+
T Consensus 272 ~Le~~TNG~~kSt~HRVv~-~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~ 350 (357)
T PLN02904 272 QVEVMSNGIYKSVVHRVTV-NKDYKRLSFASLHSLPLHKKISPAPELVNENKPAAYGEFSFNDFLDYISSNDITQERFID 350 (357)
T ss_pred HHHHHhCCeeeccCCcccC-CCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCcCCCCCHHHHHHHHHhcccCcchHHH
Confidence 9999999999999999998 66788999999999988 999999999999999999999999999998843 455555
Q ss_pred cccc
Q 044747 315 SIKA 318 (322)
Q Consensus 315 ~~~~ 318 (322)
.++.
T Consensus 351 ~~~~ 354 (357)
T PLN02904 351 TLKK 354 (357)
T ss_pred Hhcc
Confidence 5544
No 14
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=3e-73 Score=535.68 Aligned_cols=288 Identities=25% Similarity=0.393 Sum_probs=250.4
Q ss_pred CCCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCce
Q 044747 5 TKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYF 83 (322)
Q Consensus 5 ~~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~ 83 (322)
+..+||+|||+.+. .++.++|.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..++
T Consensus 48 ~~~~iPvIDls~l~-~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~ 126 (362)
T PLN02393 48 AEINIPVIDLSSLF-SDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYE 126 (362)
T ss_pred cCCCCCeEECcccc-CCChHHHHHHHHHHHHHHHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCccc
Confidence 34689999999852 333345788999999999999999999999999999999999999999999999999754 3578
Q ss_pred eee-ecCC----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 044747 84 EYY-GQYT----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESY 158 (322)
Q Consensus 84 GY~-~~~~----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~L 158 (322)
||. ..+. ..+++|.|.+.... ......|.||+.+++|+ +++++|+++|.+++.+||++|+++|
T Consensus 127 Gy~~~~~~~~~~~~d~~e~~~~~~~~----~~~~~~n~wP~~~~~fr--------~~~~~y~~~~~~la~~ll~~la~~L 194 (362)
T PLN02393 127 GYGSRLGVEKGAILDWSDYYFLHYLP----SSLKDPNKWPSLPPSCR--------ELIEEYGEEVVKLCGRLMKVLSVNL 194 (362)
T ss_pred ccccccccccccccCchhheeeeecC----ccccchhhCcccchHHH--------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 994 3222 24678877664211 01224578999888899 9999999999999999999999999
Q ss_pred CCC-CcchhhhcCc---ceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEe
Q 044747 159 GVE-GYYDSYIGSV---NYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIV 234 (322)
Q Consensus 159 gl~-~~~~~~~~~~---~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vV 234 (322)
|++ ++|.+.+... .+.||++|||+++.++..+|+++|||+|+||||+|+++++||||+ ++|+|++|+|.||++||
T Consensus 195 gl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~-~~g~W~~V~p~pgalVV 273 (362)
T PLN02393 195 GLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDNVAGLQVR-RDDAWITVKPVPDAFIV 273 (362)
T ss_pred CCCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCCceEEEEeeCCCCCcceee-ECCEEEECCCCCCeEEE
Confidence 999 8888877543 379999999999887788999999999999999984469999997 78999999999999999
Q ss_pred EhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh
Q 044747 235 MAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE 307 (322)
Q Consensus 235 nvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~ 307 (322)
|+||+||+||||+||||+|||+. +...+||||+||++|+. +|.|+++|+++++|++|+++|++||+..+.+.
T Consensus 274 NiGD~l~~~Tng~~kSt~HRVv~-~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~ 347 (362)
T PLN02393 274 NIGDQIQVLSNAIYKSVEHRVIV-NSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTK 347 (362)
T ss_pred EcchhhHhhcCCeeeccceeccc-CCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCCCCCccHHHHHHHHHhc
Confidence 99999999999999999999998 66678999999999998 99999999999999999999999999877764
No 15
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=5.6e-73 Score=530.78 Aligned_cols=293 Identities=24% Similarity=0.341 Sum_probs=249.2
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC---CCc
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST---KPY 82 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~~ 82 (322)
..+||+|||+.+ .+ +++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...
T Consensus 39 ~~~iPvIDls~~--~~--~~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~ 114 (348)
T PLN02912 39 GDSIPLIDLRDL--HG--PNRADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKTT 114 (348)
T ss_pred CCCCCeEECccc--CC--cCHHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcc
Confidence 457999999985 22 23677899999999999999999999999999999999999999999999995432 123
Q ss_pred eeeeecC----CCCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 044747 83 FEYYGQY----TIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESY 158 (322)
Q Consensus 83 ~GY~~~~----~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~L 158 (322)
+||.... ...+++|.+.+..... ....|.||+.+++|| +++++|+++|.+|+.+||++|+++|
T Consensus 115 ~~~~~~~~~~~~~~~~~e~~~~~~~~~-----~~~~n~wP~~~~~fr--------~~~~~y~~~~~~l~~~il~~la~~L 181 (348)
T PLN02912 115 RLSTSFNVSKEKVSNWRDFLRLHCYPI-----EDFIEEWPSTPISFR--------EVTAEYATSVRALVLTLLEAISESL 181 (348)
T ss_pred cccccccccccccCCchheEEEeecCc-----ccccccCcchhHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4443321 1235677766542110 012578999888999 9999999999999999999999999
Q ss_pred CCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhh
Q 044747 159 GVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAG 237 (322)
Q Consensus 159 gl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvG 237 (322)
|++ ++|.+++....+.||++||||++.++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|.||++|||+|
T Consensus 182 gl~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Q-d~v~GLQV~-~~g~Wi~V~p~pgalvVNiG 259 (348)
T PLN02912 182 GLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQ-DEVSGLQVF-KDGKWIAVNPIPNTFIVNLG 259 (348)
T ss_pred CCCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEE-CCCCceEEE-ECCcEEECCCcCCeEEEEcC
Confidence 999 889888887889999999999988778899999999999999999 899999997 68999999999999999999
Q ss_pred HHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCC--CCCCCCCccHHHHHHHHhhh--ccCC
Q 044747 238 DALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDET--QPLKYKPFDHFGFLHFNQSE--EGKK 311 (322)
Q Consensus 238 d~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~--~p~~y~~~t~~e~~~~~~~~--~g~~ 311 (322)
|+||+||||+||||+|||+. ++..+||||+||++|+. +|.|+++|++++ +|++|++++++||+..+++. .++.
T Consensus 260 D~L~~~TNG~~kSt~HRVv~-~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~ 338 (348)
T PLN02912 260 DQMQVISNDKYKSVLHRAVV-NTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATES 338 (348)
T ss_pred HHHHHHhCCEEEcccccccC-CCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHHHHhcccCCcc
Confidence 99999999999999999998 56678999999999998 999999999875 48999999999999988873 3555
Q ss_pred ccccccc
Q 044747 312 SASSIKA 318 (322)
Q Consensus 312 ~~~~~~~ 318 (322)
+++.++.
T Consensus 339 ~l~~~~~ 345 (348)
T PLN02912 339 CIDSFKA 345 (348)
T ss_pred hhhhhhc
Confidence 5555443
No 16
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=9.6e-73 Score=520.19 Aligned_cols=288 Identities=26% Similarity=0.441 Sum_probs=244.2
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCceeee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYY 86 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~ 86 (322)
.+||||||+.+. ..+++|++||++||||||+||||+.++++++++.+++||+||.|+|+++......+||.
T Consensus 4 ~~iPvIDls~~~---------~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~GY~ 74 (300)
T PLN02365 4 VNIPTIDLEEFP---------GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYM 74 (300)
T ss_pred CCCCEEEChhhH---------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCCCC
Confidence 359999999741 23589999999999999999999999999999999999999999999976555568998
Q ss_pred ecCCCCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCC-C-Ccc
Q 044747 87 GQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGV-E-GYY 164 (322)
Q Consensus 87 ~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl-~-~~~ 164 (322)
+.+...+++|.+.+...........+ ++.|| .+|+|+ +.+++|+++|.+|+.+|+++|+++||+ + ++|
T Consensus 75 ~~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~-~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f 144 (300)
T PLN02365 75 APSEVNPLYEALGLYDMASPQAVDTF-CSQLD-ASPHQR--------ETIKKYAKAIHDLAMDLARKLAESLGLVEGDFF 144 (300)
T ss_pred CcCCCCCchhheecccccCchhhhhc-cccCC-CCchHH--------HHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 87766678898877632211111111 11222 356777 999999999999999999999999999 6 677
Q ss_pred hhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCC-CCCceEEEcC-CCCeEEcCCCCCeEEeEhhHHHHH
Q 044747 165 DSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQIN-HINGLQVQAK-DGEWIDVEPSPSSFIVMAGDALMA 242 (322)
Q Consensus 165 ~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d-~~~GLqv~~~-~g~W~~V~p~~g~~vVnvGd~l~~ 242 (322)
++. .+.||++|||+++.++..+|+++|||+|+||||+| | +++||||+++ +|+|++|+|.||++|||+||+||+
T Consensus 145 ~~~----~~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~q-d~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~ 219 (300)
T PLN02365 145 QGW----PSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQD-DENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATA 219 (300)
T ss_pred hhc----ccceeeeecCCCCCccccccccCccCCCceEEEec-CCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHH
Confidence 663 47899999999988788899999999999999999 6 5999999887 799999999999999999999999
Q ss_pred HhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhhccCCccccccccc
Q 044747 243 WGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEGKKSASSIKAYC 320 (322)
Q Consensus 243 ~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 320 (322)
||||+||||+|||+. ++..+||||+||+.|+. +|.|+++++++++|++|++++++||+..+++.. ......++.|.
T Consensus 220 ~TNG~~~St~HRVv~-~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~-~~~~~~~~~~~ 297 (300)
T PLN02365 220 WSNGRLCNVKHRVQC-KEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTK-LHAGEALALIT 297 (300)
T ss_pred HhCCceecccceeEc-CCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhcc-ccccchHhhhh
Confidence 999999999999998 66678999999999988 999999999999999999999999999998742 32345565554
No 17
>PLN02947 oxidoreductase
Probab=100.00 E-value=4.2e-73 Score=535.11 Aligned_cols=293 Identities=24% Similarity=0.375 Sum_probs=250.9
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC--CCce
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST--KPYF 83 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~ 83 (322)
..+||+|||+.+ .+ .++..++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ....
T Consensus 64 ~~~iPvIDls~l--~~--~~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~ 139 (374)
T PLN02947 64 NLKLPVIDLAEL--RG--SNRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPV 139 (374)
T ss_pred CCCCCeEECccc--CC--ccHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCe
Confidence 457999999985 22 34678999999999999999999999999999999999999999999999998643 2345
Q ss_pred eeeecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 044747 84 EYYGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESY 158 (322)
Q Consensus 84 GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~L 158 (322)
||..... ..+++|.+.+..... .. ..+.||+.+++|| +++++|+++|.+|+.+||++|+++|
T Consensus 140 gyg~~~~~~~~~~~~~~e~~~~~~~p~----~~-~~~~WP~~~~~fr--------~~~~~Y~~~~~~L~~~ll~~la~~L 206 (374)
T PLN02947 140 RYGTSFNQNKDAVFCWRDFLKLVCHPL----SD-VLPHWPSSPADLR--------KVAATYAKATKRLFLELMEAILESL 206 (374)
T ss_pred eeccccccccccccCceeceeeecCCc----cc-ccccCccchHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6743211 135666665432111 01 2468999888999 9999999999999999999999999
Q ss_pred CCC-C---cchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEe
Q 044747 159 GVE-G---YYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIV 234 (322)
Q Consensus 159 gl~-~---~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vV 234 (322)
|++ + +|.+.+....+.+|++|||||+.++..+|+++|||+|+||||+| |+++||||+. +|+|++|+|+||++||
T Consensus 207 gl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Q-d~v~GLQV~~-~g~Wi~V~p~pga~VV 284 (374)
T PLN02947 207 GIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQ-DEVEGLQIMH-AGRWVTVEPIPGSFVV 284 (374)
T ss_pred CCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEe-cCCCCeeEeE-CCEEEeCCCCCCeEEE
Confidence 996 3 45566666788999999999998888999999999999999999 8999999976 8999999999999999
Q ss_pred EhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh--ccC
Q 044747 235 MAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE--EGK 310 (322)
Q Consensus 235 nvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~--~g~ 310 (322)
|+||+||+||||+|||++|||+. ++..+||||+||+.|+. +|.|+++|+++++|++|+++|++||+..+.+. .|+
T Consensus 285 NvGD~Lq~~SNG~~kS~~HRVv~-~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~ 363 (374)
T PLN02947 285 NVGDHLEIFSNGRYKSVLHRVRV-NSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHK 363 (374)
T ss_pred EeCceeeeeeCCEEecccccccc-CCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhccCch
Confidence 99999999999999999999998 66789999999999998 99999999999999999999999999988774 355
Q ss_pred Cccccccc
Q 044747 311 KSASSIKA 318 (322)
Q Consensus 311 ~~~~~~~~ 318 (322)
..++.+|+
T Consensus 364 ~~l~~~~~ 371 (374)
T PLN02947 364 NFLESRKL 371 (374)
T ss_pred hhhhhhhc
Confidence 56666665
No 18
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.4e-72 Score=526.48 Aligned_cols=292 Identities=20% Similarity=0.326 Sum_probs=246.6
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCcee
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFE 84 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G 84 (322)
..+||+|||+.+ .++++.+...+++|++||++||||||+||||+.++++++++++++||+||.|+|+++... ...+|
T Consensus 42 ~~~IPvIDls~~--~~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~G 119 (348)
T PLN00417 42 EMDIPAIDLSLL--LSSSDDGREELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQG 119 (348)
T ss_pred CCCCCeEEChhh--cCCCchHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCccc
Confidence 358999999985 233333445579999999999999999999999999999999999999999999999764 35789
Q ss_pred eeecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 044747 85 YYGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYG 159 (322)
Q Consensus 85 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 159 (322)
|..... ..+++|.+.+..... .....|.||+.+++|| +++++|+.+|.+|+.+||++||++||
T Consensus 120 Y~~~~~~~~~~~~d~~e~~~~~~~p~----~~~~~n~wP~~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~LG 187 (348)
T PLN00417 120 YGNDMILSDDQVLDWIDRLYLTTYPE----DQRQLKFWPQVPVGFR--------ETLHEYTMKQRLVIEKFFKAMARSLE 187 (348)
T ss_pred cccccccccCCCcCccceeecccCCc----ccccccccccccHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 965321 235677765542111 0123579998878899 99999999999999999999999999
Q ss_pred CC-CcchhhhcC-cceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhh
Q 044747 160 VE-GYYDSYIGS-VNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAG 237 (322)
Q Consensus 160 l~-~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvG 237 (322)
++ ++|.+.+.. ..+.||++||||++.++..+|+++|||+|+||||+|+++++||||+ ++|+|++|+|.||++|||+|
T Consensus 188 l~~~~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pg~lVVNiG 266 (348)
T PLN00417 188 LEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQFL-KDGKWYKAPIVPDTILINVG 266 (348)
T ss_pred CCHHHHHHHhccCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCceeEe-ECCeEEECCCCCCcEEEEcC
Confidence 99 888777764 3467999999999887778999999999999999993369999996 68999999999999999999
Q ss_pred HHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhhccCCcc
Q 044747 238 DALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEGKKSA 313 (322)
Q Consensus 238 d~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~g~~~~ 313 (322)
|+||+||||+||||+|||+. ++..+||||+||++|+. +|+|+++|+++++|++|+++|.+++...+....+++.+
T Consensus 267 D~Le~~Tng~~kSt~HRVv~-~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~~~~~~~~~~~~~~~~~~ 343 (348)
T PLN00417 267 DQMEIMSNGIYKSPVHRVVT-NREKERISVATFCIPGADKEIQPVDGLVSEARPRLYKTVKKYVELFFKYYQQGRRPI 343 (348)
T ss_pred hHHHHHhCCeecccceEEec-CCCCCEEEEEEEecCCCCceecCchHhcCCCCCCCCCCHHHHHHHHHHHHhcCcchh
Confidence 99999999999999999998 56678999999999998 99999999999999999999976666655555555543
No 19
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.6e-72 Score=523.51 Aligned_cols=279 Identities=26% Similarity=0.401 Sum_probs=242.9
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC---Cc
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK---PY 82 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~ 82 (322)
..+||+|||+.. ++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ..
T Consensus 35 ~~~iPvIDls~~-------~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~~ 107 (337)
T PLN02639 35 CENVPVIDLGSP-------DRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTM 107 (337)
T ss_pred CCCCCeEECCCc-------cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCcc
Confidence 357999999862 35679999999999999999999999999999999999999999999999975432 22
Q ss_pred eeeeecCC----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 044747 83 FEYYGQYT----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESY 158 (322)
Q Consensus 83 ~GY~~~~~----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~L 158 (322)
++|..... ..+++|.+.+..... ....|.||+.+|+|+ +.+++|+++|.+|+.+||++||++|
T Consensus 108 ~~~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~~n~wP~~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~L 174 (337)
T PLN02639 108 RLSTSFNVRKEKVHNWRDYLRLHCYPL-----DKYVPEWPSNPPSFK--------EIVSTYCREVRELGFRLQEAISESL 174 (337)
T ss_pred ccccccccccCcccCchheEEeeecCC-----cccchhCcccchHHH--------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33332211 235667765532110 112468998888999 9999999999999999999999999
Q ss_pred CCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCC-CCCceEEEcCCCCeEEcCCCCCeEEeEh
Q 044747 159 GVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQIN-HINGLQVQAKDGEWIDVEPSPSSFIVMA 236 (322)
Q Consensus 159 gl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d-~~~GLqv~~~~g~W~~V~p~~g~~vVnv 236 (322)
|++ ++|.+.+....+.||++|||+++.++..+|+++|||+|+||||+| | +++||||+ ++|+|++|+|.||++|||+
T Consensus 175 gl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~q-d~~v~GLQV~-~~g~Wi~V~p~pg~lVVNi 252 (337)
T PLN02639 175 GLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQ-DQQVAGLQVL-KDGKWVAVNPHPGAFVINI 252 (337)
T ss_pred CCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEe-cCCcCceEee-cCCeEEeccCCCCeEEEec
Confidence 999 889888888888999999999988778899999999999999999 6 59999996 6899999999999999999
Q ss_pred hHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh
Q 044747 237 GDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE 307 (322)
Q Consensus 237 Gd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~ 307 (322)
||+||+||||+||||+|||+. ++..+|||++||++|+. +|.|+++|+++++|++|+|+|++||++.++..
T Consensus 253 GD~L~~~TNG~~kSt~HRVv~-~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~~~~ 324 (337)
T PLN02639 253 GDQLQALSNGRYKSVWHRAVV-NTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWSR 324 (337)
T ss_pred hhHHHHHhCCeeeccCccccc-CCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHHHHhc
Confidence 999999999999999999998 56688999999999998 99999999999999999999999999998873
No 20
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=7.7e-72 Score=519.39 Aligned_cols=278 Identities=23% Similarity=0.345 Sum_probs=241.3
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCceeee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYY 86 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~ 86 (322)
..||+|||+.. ...++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..+||.
T Consensus 25 ~~iPvIDls~~----------~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~-~~~Gy~ 93 (335)
T PLN02156 25 VLIPVIDLTDS----------DAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP-DPFGYG 93 (335)
T ss_pred CCCCcccCCCh----------HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC-CCcccC
Confidence 46999999741 2467999999999999999999999999999999999999999999998654 345885
Q ss_pred ecC--C--CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-
Q 044747 87 GQY--T--IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVE- 161 (322)
Q Consensus 87 ~~~--~--~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~- 161 (322)
... . ..+++|.+.+....... .....|.||+.++.|+ +++++|+++|.+|+.+|+++|+++||++
T Consensus 94 ~~~~~~~~~~~~~e~~~~~~~~~~~--~~~~~~~wp~~p~~fr--------~~~~~Y~~~~~~L~~~ll~~la~~LGl~~ 163 (335)
T PLN02156 94 TKRIGPNGDVGWLEYILLNANLCLE--SHKTTAVFRHTPAIFR--------EAVEEYMKEMKRMSSKVLEMVEEELKIEP 163 (335)
T ss_pred ccccCCCCCCCceeeEeeecCCccc--cccchhcCccccHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcCcCc
Confidence 321 1 24688988776432211 1123678998778888 9999999999999999999999999996
Q ss_pred -Ccchhhhc--CcceeeecccccCCCCC--CCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEh
Q 044747 162 -GYYDSYIG--SVNYLLRYFKYRAPEPN--ETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMA 236 (322)
Q Consensus 162 -~~~~~~~~--~~~~~lr~~~Yp~~~~~--~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnv 236 (322)
++|.+++. ...+.||++|||+++.. +..+|+++|||+|+||||+| |+++||||+.++|+|++|+|.||++|||+
T Consensus 164 ~~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Q-d~v~GLQV~~~~g~Wi~Vpp~pga~VVNi 242 (335)
T PLN02156 164 KEKLSKLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRS-NDTAGLQICVKDGTWVDVPPDHSSFFVLV 242 (335)
T ss_pred HHHHHHHhcCCCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEe-CCCCceEEEeCCCCEEEccCCCCcEEEEh
Confidence 57887764 34689999999999752 35789999999999999999 89999999888999999999999999999
Q ss_pred hHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh
Q 044747 237 GDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE 307 (322)
Q Consensus 237 Gd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~ 307 (322)
||+||+||||+||||.|||+. +...+||||+||+.|+. +|.|+++++++++|++|+|+|++||+..+++.
T Consensus 243 GD~l~~wTNg~~kSt~HRVv~-~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~ 314 (335)
T PLN02156 243 GDTLQVMTNGRFKSVKHRVVT-NTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKT 314 (335)
T ss_pred HHHHHHHhCCeeeccceeeec-CCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhc
Confidence 999999999999999999998 66778999999999998 99999999999999999999999999999874
No 21
>PLN02704 flavonol synthase
Probab=100.00 E-value=8.5e-72 Score=521.32 Aligned_cols=278 Identities=22% Similarity=0.364 Sum_probs=242.0
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC---Cc
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK---PY 82 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~ 82 (322)
..+||+|||+.. ++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... .+
T Consensus 40 ~~~iPvIDls~~-------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~ 112 (335)
T PLN02704 40 DPQVPTIDLSDP-------DEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFELPQEEKEVYAKPPDSKSI 112 (335)
T ss_pred CCCCCeEECCCc-------cHHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCccc
Confidence 457999999863 23568899999999999999999999999999999999999999999999987542 46
Q ss_pred eeeeecCC-----CCCceeeeecC-CCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 044747 83 FEYYGQYT-----IIPLYESLAID-YPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFE 156 (322)
Q Consensus 83 ~GY~~~~~-----~~d~~E~~~~~-~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~ 156 (322)
+||..... ..+++|.+... .+.. ....|.||+.+|+|| +.+++|+++|.+|+.+||++|++
T Consensus 113 ~Gy~~~~~~~~~~~~~~~d~~~~~~~p~~-----~~~~n~wP~~~p~fr--------~~~~~y~~~~~~l~~~ll~~la~ 179 (335)
T PLN02704 113 EGYGTKLQKEPEGKKAWVDHLFHRIWPPS-----AINYQFWPKNPPSYR--------EVNEEYAKYLRGVADKLFKTLSL 179 (335)
T ss_pred ccccccccccccCcccceeeeEeeecCCc-----ccchhhCccccchhH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 89965422 12345554321 1110 112468998888999 99999999999999999999999
Q ss_pred HcCCC-CcchhhhcC--cceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEE
Q 044747 157 SYGVE-GYYDSYIGS--VNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFI 233 (322)
Q Consensus 157 ~Lgl~-~~~~~~~~~--~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~v 233 (322)
+||++ ++|.+.+.. ..+.||++|||+++.++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|.||++|
T Consensus 180 ~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~-~~g~Wi~V~p~pg~lv 257 (335)
T PLN02704 180 GLGLEEDELKEAVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVP-NEVQGLQVF-RDDHWFDVKYIPNALV 257 (335)
T ss_pred HcCCCHHHHHHHhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEec-CCCCceeEe-ECCEEEeCCCCCCeEE
Confidence 99999 888877653 346899999999988788899999999999999999 899999996 6899999999999999
Q ss_pred eEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhh
Q 044747 234 VMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQS 306 (322)
Q Consensus 234 VnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~ 306 (322)
||+||+||+||||+||||+|||+. +...+||||+||++|+. +|.|+++|+++++|++|+++|++||+..+++
T Consensus 258 VNvGD~L~~~TNg~~kSt~HRVv~-~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 258 IHIGDQIEILSNGKYKSVLHRTTV-NKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKDYVYCKLN 331 (335)
T ss_pred EEechHHHHHhCCeeecccceeec-CCCCCeEEEEEEecCCCCceEeCChHhcCCCCCccCCCCCHHHHHHHHHh
Confidence 999999999999999999999998 66788999999999998 9999999999999999999999999998886
No 22
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=9.8e-72 Score=494.71 Aligned_cols=289 Identities=21% Similarity=0.328 Sum_probs=251.9
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC--CCce
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST--KPYF 83 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~ 83 (322)
+..||+|||+.+ ..++..+|..++++|++||+++|||||+||||+..+++++++++++||+||.|+|+++... ...+
T Consensus 3 ~~~lp~idls~~-~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~r 81 (322)
T COG3491 3 TRDLPIIDLSEL-AGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHR 81 (322)
T ss_pred CCcCceeccHHh-cCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCcccc
Confidence 457999999985 2334457999999999999999999999999999999999999999999999999999854 3689
Q ss_pred eeeecCC-----CCCceeeeecCCCCC------chhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHH
Q 044747 84 EYYGQYT-----IIPLYESLAIDYPDT------RNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTR 152 (322)
Q Consensus 84 GY~~~~~-----~~d~~E~~~~~~~~~------~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~ 152 (322)
||.+.+. +.|++|.++++.+-. ..+....++|.|| ..|+|+ +.+..|+++|.+++.+||+
T Consensus 82 GY~~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP-~ip~~r--------~~ll~~~~~~~~~~~rLL~ 152 (322)
T COG3491 82 GYTPHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP-AIPGLR--------DALLQYYRAMTAVGLRLLR 152 (322)
T ss_pred ccccCcccccCCccchhhhcccccccccccCCCccCCCcCCCCCCc-cchhHH--------HHHHHHHHHHHHHHHHHHH
Confidence 9987764 358999998875322 2223455789999 889999 9999999999999999999
Q ss_pred HHHHHcCCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCe
Q 044747 153 MLFESYGVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSS 231 (322)
Q Consensus 153 ~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~ 231 (322)
+||.+|+|+ ++|++.++++.+.||++|||+.+..+...+.|+|||+|+||||+| |+++||||++++|+|++|+|.||+
T Consensus 153 aiA~~LdL~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Q-d~~~GLqv~~~~g~Wl~v~P~pgt 231 (322)
T COG3491 153 AIALGLDLPEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQ-DDVGGLEVRPPNGGWLDVPPIPGT 231 (322)
T ss_pred HHHHHcCCChhhhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEe-cccCCeEEecCCCCeeECCCCCCe
Confidence 999999999 899999999999999999999988888889999999999999999 999999999999999999999999
Q ss_pred EEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCC-CCCCCCCCCCCCCc-----cHHHHHHH
Q 044747 232 FIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPK-ELGDETQPLKYKPF-----DHFGFLHF 303 (322)
Q Consensus 232 ~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~-~~~~~~~p~~y~~~-----t~~e~~~~ 303 (322)
+|||+|||||+||||+||||+|||+.|+ ..+||||+||+.|+. .|.|+. .+.+.+.++++.+- -..||-.+
T Consensus 232 lvVNiGdmLe~~Tng~lrST~HRV~~~~-~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~~~~~~t~~~n~l~r~~~~n 310 (322)
T COG3491 232 LVVNIGDMLERWTNGRLRSTVHRVRNPP-GVDRYSIPFFLEPNFDAEIAPLLPLCPEAANEPRGPGTDPDNPLLRDYATN 310 (322)
T ss_pred EEEeHHHHHHHHhCCeeccccceeecCC-CccceeeeeeccCCCCccccccCCCCcccccCCcCCCCCCCchHHHHHHHH
Confidence 9999999999999999999999999944 489999999999998 999755 55556667777764 34444444
Q ss_pred Hhh
Q 044747 304 NQS 306 (322)
Q Consensus 304 ~~~ 306 (322)
.++
T Consensus 311 ~~~ 313 (322)
T COG3491 311 FLK 313 (322)
T ss_pred HHH
Confidence 444
No 23
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=2.4e-71 Score=513.08 Aligned_cols=288 Identities=35% Similarity=0.546 Sum_probs=250.5
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC-Ccee
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK-PYFE 84 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~G 84 (322)
..+||+|||+.+. ..+..+..++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++.... ...|
T Consensus 15 ~~~iPvIDls~~~--~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~g 92 (322)
T KOG0143|consen 15 ELDIPVIDLSCLD--SDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYRG 92 (322)
T ss_pred CCCcCeEECCCCC--CcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCccc
Confidence 4689999999742 222257788999999999999999999999999999999999999999999999998776 6789
Q ss_pred eeecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 044747 85 YYGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYG 159 (322)
Q Consensus 85 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lg 159 (322)
|..... ..+|.+.+...... ...+..+.||+.++.|| +++++|.+++.+|+..|+++|+++||
T Consensus 93 Y~~~~~~~~~~~~~w~d~~~~~~~p----~~~~~~~~wp~~p~~~r--------e~~~eY~~~~~~L~~~l~~~l~eslg 160 (322)
T KOG0143|consen 93 YGTSFILSPLKELDWRDYLTLLSAP----ESSFDPNLWPEGPPEFR--------ETMEEYAKEVMELSEKLLRLLSESLG 160 (322)
T ss_pred ccccccccccccccchhheeeeccC----ccccCcccCccccHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 975542 22344444332111 01145679999999999 99999999999999999999999999
Q ss_pred CC-CcchhhhcC-cceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhh
Q 044747 160 VE-GYYDSYIGS-VNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAG 237 (322)
Q Consensus 160 l~-~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvG 237 (322)
++ +++.+.++. ..+.||++|||||++++..+|+++|||.|+||+|+|+|+++||||..++|+|++|+|.||+||||+|
T Consensus 161 l~~~~~~~~~~~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiG 240 (322)
T KOG0143|consen 161 LEPEYLEKLFGETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIG 240 (322)
T ss_pred CChHHHHHhhCCccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcc
Confidence 99 777777766 5679999999999999999999999999999999994489999997678999999999999999999
Q ss_pred HHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhhcc
Q 044747 238 DALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEG 309 (322)
Q Consensus 238 d~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~g 309 (322)
|+||+||||+|||++|||+. ++..+|+|+|||+.|.. +|.|+++++++. |++|+++|+.+|+..+.+...
T Consensus 241 D~l~~lSNG~ykSv~HRV~~-n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~~~~~~ 312 (322)
T KOG0143|consen 241 DMLQILSNGRYKSVLHRVVV-NGEKERISVAFFVFPPLDKVIGPPEELVDEE-PPKYKPFTFGDYLEFYFSKKL 312 (322)
T ss_pred cHHhHhhCCcccceEEEEEe-CCCCceEEEEEEecCCCCceecChhhhCCCC-CCccCcEEHHHHHHHHHhccc
Confidence 99999999999999999999 88778999999999988 999999999887 888999999999999988543
No 24
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=2.6e-68 Score=489.75 Aligned_cols=269 Identities=19% Similarity=0.275 Sum_probs=228.8
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-C--Ccee
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-K--PYFE 84 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~--~~~G 84 (322)
+||+|||+.+ . +.++++++++|++||++||||||+||||+.++++++++.+++||+||.|+|...... . ...|
T Consensus 2 ~iPvIDls~~--~--~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~~~~~~~~~~~~~ 77 (303)
T PLN02403 2 EIPVIDFDQL--D--GEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFYESEIAKALDNEG 77 (303)
T ss_pred CCCeEeCccC--C--cccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhhcccccCcccccC
Confidence 6999999975 2 234678999999999999999999999999999999999999999999999632111 1 1223
Q ss_pred eeecCCCCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-Cc
Q 044747 85 YYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVE-GY 163 (322)
Q Consensus 85 Y~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~ 163 (322)
| ....|++|.|.+..... ...|.||+.+|+|| +++++|+++|.+|+..|+++|+++||++ ++
T Consensus 78 ~---~~~~d~kE~~~~~~~p~------~~~~~wP~~~p~fr--------~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 140 (303)
T PLN02403 78 K---TSDVDWESSFFIWHRPT------SNINEIPNLSEDLR--------KTMDEYIAQLIKLAEKLSELMSENLGLDKDY 140 (303)
T ss_pred C---CCCccHhhhcccccCCc------cchhhCCCCcHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 3 23458999998763211 12468998778999 9999999999999999999999999999 88
Q ss_pred chhhhc---CcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCC-CeEEeEhhHH
Q 044747 164 YDSYIG---SVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSP-SSFIVMAGDA 239 (322)
Q Consensus 164 ~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~-g~~vVnvGd~ 239 (322)
|.+.+. .+.+.||++|||+++.++...|+++|||+|+||||+|+++++||||+ ++|+|++|+|.| |++|||+||+
T Consensus 141 f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~-~~g~Wi~V~p~p~~~lvVNvGD~ 219 (303)
T PLN02403 141 IKEAFSGNKGPSVGTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFL-KDGKWVPIPPSKNNTIFVNTGDQ 219 (303)
T ss_pred HHHHhccCCCccceeeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEec-cCCeEEECCCCCCCEEEEEehHH
Confidence 887765 33456999999999877777899999999999999993359999994 789999999999 6999999999
Q ss_pred HHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCC-CccHHHHHHHHhh
Q 044747 240 LMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYK-PFDHFGFLHFNQS 306 (322)
Q Consensus 240 l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~-~~t~~e~~~~~~~ 306 (322)
||+||||+|||++|||+. +...+|||++||++|+. +|.|+++++. + ++|++||+..+.+
T Consensus 220 L~~~Tng~~~S~~HRVv~-~~~~~R~Si~~F~~p~~d~~i~pl~~~~~-------~~~~~~~eyl~~~~~ 281 (303)
T PLN02403 220 LEVLSNGRYKSTLHRVMA-DKNGSRLSIATFYNPAGDAIISPAPKLLY-------PSNYRFQDYLKLYST 281 (303)
T ss_pred HHHHhCCeeecccceeec-CCCCCEEEEEEEEcCCCCCeEeCchhhCC-------CCCccHHHHHHHHHH
Confidence 999999999999999998 66678999999999998 9999998763 3 4999999998886
No 25
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.6e-67 Score=491.62 Aligned_cols=265 Identities=23% Similarity=0.376 Sum_probs=222.9
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC----
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKP---- 81 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~---- 81 (322)
..+||+|||+.+ .+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.....
T Consensus 36 ~~~IPvIDls~~-----------~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~ 104 (341)
T PLN02984 36 DIDIPVIDMECL-----------DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSY 104 (341)
T ss_pred cCCCCeEeCcHH-----------HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCcc
Confidence 456999999863 25799999999999999999999999999999999999999999999852111
Q ss_pred ceeee---ecCC---------CCCceeeeecCCCCCchhhhcccCCCCC--CccccccccCCCChHHHHHHHHHHHHHHH
Q 044747 82 YFEYY---GQYT---------IIPLYESLAIDYPDTRNATQSFTNLMWP--AEMIAFGMICPYSLLESSLSMSELVVELD 147 (322)
Q Consensus 82 ~~GY~---~~~~---------~~d~~E~~~~~~~~~~~~~~~~~~~~wP--~~~p~f~~~~p~~~~~~~~~y~~~~~~l~ 147 (322)
..||. ..+. ..|++|.|.++..... .. .+.|| ...|+|| +++++|+++|.+|+
T Consensus 105 ~~g~~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~~~----~~-~~~p~~~~~~p~fr--------~~~~~y~~~~~~La 171 (341)
T PLN02984 105 FWGTPALTPSGKALSRGPQESNVNWVEGFNIPLSSLS----LL-QTLSCSDPKLESFR--------VLMEEYGKHLTRIA 171 (341)
T ss_pred ccCcccccccccccccccccCCCCeeeEEeCcCCchh----hh-hhcCCCCCccHHHH--------HHHHHHHHHHHHHH
Confidence 12332 1110 2489999988743211 11 11122 2346677 99999999999999
Q ss_pred HHHHHHHHHHcCCC---CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEE
Q 044747 148 KMVTRMLFESYGVE---GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWID 224 (322)
Q Consensus 148 ~~ll~~l~~~Lgl~---~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~ 224 (322)
..||++||++||++ ++|.+++..+.+.||++||||++.++..+|+++|||+|+||||+| |+++||||+ ++|+|++
T Consensus 172 ~~ll~~lA~~Lgl~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Q-d~v~GLQV~-~~g~Wv~ 249 (341)
T PLN02984 172 VTLFEAIAKTLSLELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQ-DEVGGLEVM-KDGEWFN 249 (341)
T ss_pred HHHHHHHHHHcCCCcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEe-CCCCCeeEe-eCCceEE
Confidence 99999999999997 467888888888999999999987777899999999999999999 899999996 6899999
Q ss_pred cCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHH
Q 044747 225 VEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLH 302 (322)
Q Consensus 225 V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~ 302 (322)
|+|.||++|||+||+||+||||+||||+|||+.++...+|||++||++|+. +|. |++|+|+|++||+.
T Consensus 250 V~p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~----------p~~y~p~t~~e~l~ 319 (341)
T PLN02984 250 VKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIK----------SSKYKPFTYSDFEA 319 (341)
T ss_pred CCCCCCeEEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEc----------cCCcCcccHHHHHH
Confidence 999999999999999999999999999999965356688999999999998 664 46899999999999
Q ss_pred HHhh
Q 044747 303 FNQS 306 (322)
Q Consensus 303 ~~~~ 306 (322)
.+..
T Consensus 320 ~~~~ 323 (341)
T PLN02984 320 QVQL 323 (341)
T ss_pred HHHh
Confidence 8885
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8.6e-61 Score=431.40 Aligned_cols=241 Identities=19% Similarity=0.278 Sum_probs=209.8
Q ss_pred HHHHHHhhC-CCHHHHhhcCCCC---CceeeeecCC-------CCCceeeeecCCCCCchhhhcccCCCCCCcccccccc
Q 044747 59 LASTEELFD-VPIEIKVKNTSTK---PYFEYYGQYT-------IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMI 127 (322)
Q Consensus 59 ~~~~~~fF~-lp~e~K~~~~~~~---~~~GY~~~~~-------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~ 127 (322)
.+.+++||+ ||.|+|+++.... ..+||..... ..|++|.|.+..... ....+|.||+.+|.|+
T Consensus 2 ~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~~~p~----~~~~~n~wP~~~~~f~-- 75 (262)
T PLN03001 2 RSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHTFPL----SRRNPSHWPDFPPDYR-- 75 (262)
T ss_pred hHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEeeecCc----cccchhhCCCCcHHHH--
Confidence 568999997 9999999987543 4689943221 247899998742111 1123679999888999
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEee
Q 044747 128 CPYSLLESSLSMSELVVELDKMVTRMLFESYGVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQ 206 (322)
Q Consensus 128 ~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q 206 (322)
+++++|+++|.+|+.+|+++|+++||++ ++|.+.+....+.||++|||+++.++..+|+++|||+|+||||+|
T Consensus 76 ------~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~q 149 (262)
T PLN03001 76 ------EVVGEYGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQ 149 (262)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEe
Confidence 9999999999999999999999999999 889888877778899999999988888999999999999999999
Q ss_pred CCCCCceEEEcCCCCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCC
Q 044747 207 INHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELG 284 (322)
Q Consensus 207 ~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~ 284 (322)
|+++||||+ ++|+|++|+|.||++||||||+||+||||+|||++|||+. +...+||||+||++|+. +|.|+++|+
T Consensus 150 -d~v~GLqV~-~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~-~~~~~R~Sia~F~~p~~d~~i~p~~e~v 226 (262)
T PLN03001 150 -DDVEGLQLL-KDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIA-NANKARLSVATFHDPAKTAKIAPASALS 226 (262)
T ss_pred -CCCCceEEe-eCCeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEc-CCCCCEEEEEEEEcCCCCCEEeCChHhc
Confidence 899999996 6889999999999999999999999999999999999999 66788999999999998 999999999
Q ss_pred CCCCCCCCCCccHHHHHHHHhh--hccCCccc
Q 044747 285 DETQPLKYKPFDHFGFLHFNQS--EEGKKSAS 314 (322)
Q Consensus 285 ~~~~p~~y~~~t~~e~~~~~~~--~~g~~~~~ 314 (322)
++++|++|++++++||+..+++ ..++++++
T Consensus 227 ~~~~p~~y~~~~~~e~l~~~~~~~~~~~~~~~ 258 (262)
T PLN03001 227 TESFPPRYCEIVYGEYVSSWYSKGPEGKRNID 258 (262)
T ss_pred CCCCCCcCCCccHHHHHHHHHHhccCCcchhh
Confidence 9999999999999999998887 33444443
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.92 E-value=2.6e-25 Score=171.70 Aligned_cols=95 Identities=39% Similarity=0.653 Sum_probs=74.7
Q ss_pred eeeecccccCCCCCCCCCccccccCC--CCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhhHHHHHHhCCCccC
Q 044747 173 YLLRYFKYRAPEPNETKMGLTPHTDK--TMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRP 250 (322)
Q Consensus 173 ~~lr~~~Yp~~~~~~~~~g~~~HtD~--g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks 250 (322)
+.||+++|++ ++...++++|+|. +++|+|+| ++.+||||+..+ +|+.|++.++.++||+||+|++||||.++|
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~-~~~~gL~~~~~~-~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~ 76 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQ-DEVGGLQVRDDG-EWVDVPPPPGGFIVNFGDALEILTNGRYPA 76 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEE-TSTS-EEEEETT-EEEE----TTCEEEEEBHHHHHHTTTSS--
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEec-ccchheeccccc-cccCccCccceeeeeceeeeecccCCccCC
Confidence 5799999998 5677899999999 99999999 999999996544 899999999999999999999999999999
Q ss_pred CCceeecCCCCCceEEEEeccCC
Q 044747 251 CRHQVIMDNASETRYSLGLFSFS 273 (322)
Q Consensus 251 ~~HRVv~~~~~~~R~Si~~F~~P 273 (322)
++|||+. .....|+|++||++|
T Consensus 77 ~~HrV~~-~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 77 TLHRVVP-PTEGERYSLTFFLRP 98 (98)
T ss_dssp --EEEE---STS-EEEEEEEEE-
T ss_pred ceeeeEc-CCCCCEEEEEEEECC
Confidence 9999999 557899999999987
No 28
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.90 E-value=5.5e-24 Score=169.37 Aligned_cols=107 Identities=30% Similarity=0.422 Sum_probs=86.6
Q ss_pred CCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCceeeeec
Q 044747 9 IPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQ 88 (322)
Q Consensus 9 iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 88 (322)
||||||+. ..+.|..++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++......+||.+.
T Consensus 1 iPvIDls~-----~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~ 75 (116)
T PF14226_consen 1 IPVIDLSP-----DPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARSPSYRGYSPP 75 (116)
T ss_dssp --EEEHGG-----CHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCCTTCSEEEES
T ss_pred CCeEECCC-----CCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCCCCCcccccC
Confidence 89999986 3456889999999999999999999999999999999999999999999999999777789999985
Q ss_pred CC------CCCceeeeecCCCCCc---hhhhcccCCCCCCc
Q 044747 89 YT------IIPLYESLAIDYPDTR---NATQSFTNLMWPAE 120 (322)
Q Consensus 89 ~~------~~d~~E~~~~~~~~~~---~~~~~~~~~~wP~~ 120 (322)
+. ..|++|+|.++..... .......+|+||++
T Consensus 76 ~~~~~~~~~~d~~E~~~~~~~~~~~~p~~~~~~~~n~WP~~ 116 (116)
T PF14226_consen 76 GSESTDGGKPDWKESFNIGPDLPEDDPAYPPLYGPNIWPDE 116 (116)
T ss_dssp EEECCTTCCCCSEEEEEEECC-STTCHHTGCTS-GGGS-TT
T ss_pred CccccCCCCCCceEEeEEECCCCccccccccccCCCCCCCC
Confidence 42 4689999999865321 12334678899963
No 29
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.79 E-value=3.4e-19 Score=142.01 Aligned_cols=79 Identities=23% Similarity=0.401 Sum_probs=68.7
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC-Cceee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK-PYFEY 85 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY 85 (322)
.+||||||+.+ .++++.+.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++...+ ...||
T Consensus 36 ~~iPvIDls~~--~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~FF~LP~e~K~k~~~~~~~~~gy 113 (120)
T PLN03176 36 NEIPVISIAGI--DDGGEKRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEKLRFDMSGGKKGGF 113 (120)
T ss_pred CCCCeEECccc--cCCchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHhcccCCCccCCc
Confidence 47999999985 3444557789999999999999999999999999999999999999999999999997553 45688
Q ss_pred ee
Q 044747 86 YG 87 (322)
Q Consensus 86 ~~ 87 (322)
..
T Consensus 114 ~~ 115 (120)
T PLN03176 114 IV 115 (120)
T ss_pred ch
Confidence 43
No 30
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.69 E-value=0.0011 Score=50.69 Aligned_cols=81 Identities=22% Similarity=0.340 Sum_probs=55.5
Q ss_pred eecccccCCCCCCCCCccccccCC-----CCceEEeeCC-C-----CCceEEEc---CCCCeEEcC-----CCCCeEEeE
Q 044747 175 LRYFKYRAPEPNETKMGLTPHTDK-----TMTSIIHQIN-H-----INGLQVQA---KDGEWIDVE-----PSPSSFIVM 235 (322)
Q Consensus 175 lr~~~Yp~~~~~~~~~g~~~HtD~-----g~lTlL~q~d-~-----~~GLqv~~---~~g~W~~V~-----p~~g~~vVn 235 (322)
+++++|++- -.+.+|+|. ..+|+|+.-+ . .|.|++.. .++....++ |.+|.+|+.
T Consensus 1 ~~~~~y~~G------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPPG------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEETT------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECcC------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 466777542 357899999 4888885422 2 35688865 345667777 999999998
Q ss_pred hhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccC
Q 044747 236 AGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSF 272 (322)
Q Consensus 236 vGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~ 272 (322)
-+ ..++|+|........|+++.+|++
T Consensus 75 ~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp ES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 66 568999988326789999999863
No 31
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=95.58 E-value=0.1 Score=46.17 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=39.1
Q ss_pred CCceEEEcCCCCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccC
Q 044747 210 INGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSF 272 (322)
Q Consensus 210 ~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~ 272 (322)
.|.|.+.+..|. ..|+|..|.+|+.-. +++|+|.. -....||++.+..+
T Consensus 129 GGEl~~~~~~g~-~~Vkp~aG~~vlfps------------~~lH~v~p-Vt~G~R~~~~~Wi~ 177 (226)
T PRK05467 129 GGELVIEDTYGE-HRVKLPAGDLVLYPS------------TSLHRVTP-VTRGVRVASFFWIQ 177 (226)
T ss_pred CCceEEecCCCc-EEEecCCCeEEEECC------------CCceeeee-ccCccEEEEEecHH
Confidence 455888766665 688999999999885 48999987 66678999998875
No 32
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=94.57 E-value=0.27 Score=41.52 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHcCCCCcchhhhcCcceeeecccccCCCCCCCCCccccccCCC--------CceEEee--CCCCCc-eE
Q 044747 146 LDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKT--------MTSIIHQ--INHING-LQ 214 (322)
Q Consensus 146 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~q--~d~~~G-Lq 214 (322)
+...|.+.+...++++.. .......+++.+|.+. -...+|.|.. .+|+++. +...|| |.
T Consensus 60 ~~~~l~~~i~~~~~~~~~----~~~~~~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~ 129 (178)
T smart00702 60 VIERIRQRLADFLGLLRG----LPLSAEDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELV 129 (178)
T ss_pred HHHHHHHHHHHHHCCCch----hhccCcceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEE
Confidence 334444555555555411 1123456888899763 2467899866 5787765 223444 66
Q ss_pred EEcCCC-CeEEcCCCCCeEEeEh-hHHHHHHhCCCccCCCceeecCCCCCceEEEEeccC
Q 044747 215 VQAKDG-EWIDVEPSPSSFIVMA-GDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSF 272 (322)
Q Consensus 215 v~~~~g-~W~~V~p~~g~~vVnv-Gd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~ 272 (322)
+...+. ....|.|..|.+|+.- ++ +.++|.|.. .....|+++..+++
T Consensus 130 f~~~~~~~~~~v~P~~G~~v~f~~~~----------~~~~H~v~p-v~~G~r~~~~~W~~ 178 (178)
T smart00702 130 FPGLGLMVCATVKPKKGDLLFFPSGR----------GRSLHGVCP-VTRGSRWAITGWIR 178 (178)
T ss_pred ecCCCCccceEEeCCCCcEEEEeCCC----------CCccccCCc-ceeCCEEEEEEEEC
Confidence 643331 3568999999988854 32 278999876 55578999988764
No 33
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=89.52 E-value=1 Score=38.13 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=48.0
Q ss_pred CCccccccCC----CCceEEeeC---CCCCceEEEcC---CCCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeec-
Q 044747 189 KMGLTPHTDK----TMTSIIHQI---NHINGLQVQAK---DGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIM- 257 (322)
Q Consensus 189 ~~g~~~HtD~----g~lTlL~q~---d~~~GLqv~~~---~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~- 257 (322)
......|.|. ..+|++..- |..+|+-+... +..=+.|.+.+|++++..|-.+ .|-|..
T Consensus 84 nr~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~~~-----------~Hgvtpv 152 (171)
T PF12851_consen 84 NRCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAKRE-----------LHGVTPV 152 (171)
T ss_pred ecCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEcccce-----------eeecCcc
Confidence 3457789998 677777761 23466666433 1124788999999999988543 343332
Q ss_pred --C-CCCCceEEEEeccC
Q 044747 258 --D-NASETRYSLGLFSF 272 (322)
Q Consensus 258 --~-~~~~~R~Si~~F~~ 272 (322)
| .....|+|++||.+
T Consensus 153 ~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 153 ESPNRNHGTRISLVFYQH 170 (171)
T ss_pred cCCCCCCCeEEEEEEEeE
Confidence 1 12478999999975
No 34
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=86.82 E-value=6.1 Score=34.33 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=31.9
Q ss_pred CCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEecc
Q 044747 220 GEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFS 271 (322)
Q Consensus 220 g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~ 271 (322)
..|+.|.|.+|.+|+.-+. -.|+|..-.++.+|+||+|=+
T Consensus 159 ~~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 159 QRFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred CccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 3588999999999998873 379988733568999999843
No 35
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=80.32 E-value=1.8 Score=32.95 Aligned_cols=39 Identities=23% Similarity=0.375 Sum_probs=25.2
Q ss_pred CCCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEe
Q 044747 219 DGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGL 269 (322)
Q Consensus 219 ~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~ 269 (322)
...++.++|.+|.+||.-+. ..|+|..-.++.+|+||+|
T Consensus 62 ~~~~~~~~p~~G~lvlFPs~------------l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 62 NSPYYIVEPEEGDLVLFPSW------------LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp C-SEEEE---TTEEEEEETT------------SEEEE----SSS-EEEEEE
T ss_pred cCceEEeCCCCCEEEEeCCC------------CEEeccCcCCCCCEEEEEc
Confidence 35688999999999999984 4899987445579999997
No 36
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=74.69 E-value=15 Score=32.19 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=46.3
Q ss_pred eecccccCCCCCCCCCccccccCCC-----CceEEeeCCCCCc-eEEE--cCCCCeEEcCCCCCeEEeEhhHHHHHHhCC
Q 044747 175 LRYFKYRAPEPNETKMGLTPHTDKT-----MTSIIHQINHING-LQVQ--AKDGEWIDVEPSPSSFIVMAGDALMAWGND 246 (322)
Q Consensus 175 lr~~~Yp~~~~~~~~~g~~~HtD~g-----~lTlL~q~d~~~G-Lqv~--~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG 246 (322)
+-+|+|.+- . +++.|.|-. ..-+-.+ =+.+. +.+. ..++++..+.-.+|.++|.-|+. +.|
T Consensus 118 ~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvS-LG~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~~--- 186 (213)
T PRK15401 118 CLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVS-LGLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RLR--- 186 (213)
T ss_pred EEEEeccCc-----C-ccccccCCCcccCCCCEEEEe-CCCCeEEEecccCCCCceEEEEeCCCCEEEECchH-hhe---
Confidence 557888642 2 899999942 1111111 11222 2222 13456899999999999999986 444
Q ss_pred CccCCCceeecC------CCCCceEEEEe
Q 044747 247 RIRPCRHQVIMD------NASETRYSLGL 269 (322)
Q Consensus 247 ~~ks~~HRVv~~------~~~~~R~Si~~ 269 (322)
.|.|..- ..+..|+|+.|
T Consensus 187 -----~HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 187 -----YHGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred -----eccCCcCCCCcCCCCCCCeEEEEe
Confidence 3554321 11247999987
No 37
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=67.20 E-value=6.7 Score=37.88 Aligned_cols=54 Identities=19% Similarity=0.249 Sum_probs=37.6
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhC
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFD 67 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 67 (322)
..-||.||++.+ .++ ...+++.+.+++.|++.|.|. ||.+...+..+..++|..
T Consensus 47 ~~~IP~i~f~di--~~~-----~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 47 SSIIPEIDFADI--ENG-----GVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp --SS-EEEHHHH--HCT--------HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCCceeeHHHH--hCC-----CCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 357999999974 333 245788889999999988887 888888877777777754
No 38
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=65.74 E-value=13 Score=31.51 Aligned_cols=89 Identities=25% Similarity=0.330 Sum_probs=44.2
Q ss_pred eeeecccccCCCCCCCCCccccccCCCCc---eEEee--CCCCCceEEEcC--CCCeEEcCCCCCeEEeEhhHHHHHHhC
Q 044747 173 YLLRYFKYRAPEPNETKMGLTPHTDKTMT---SIIHQ--INHINGLQVQAK--DGEWIDVEPSPSSFIVMAGDALMAWGN 245 (322)
Q Consensus 173 ~~lr~~~Yp~~~~~~~~~g~~~HtD~g~l---TlL~q--~d~~~GLqv~~~--~g~W~~V~p~~g~~vVnvGd~l~~~Tn 245 (322)
..+-+++|.+ +. ++++|.|--.+ ..+.. -....-+.+... .+..+.+...+|+++|.-|++=..| .
T Consensus 97 n~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~-H 169 (194)
T PF13532_consen 97 NQCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW-H 169 (194)
T ss_dssp SEEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEES-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-E
T ss_pred CEEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEccCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-e
Confidence 3456788864 34 89999997733 22211 001122333332 4679999999999999999986665 4
Q ss_pred CCccCCCceeecC-CCCCceEEEEe
Q 044747 246 DRIRPCRHQVIMD-NASETRYSLGL 269 (322)
Q Consensus 246 G~~ks~~HRVv~~-~~~~~R~Si~~ 269 (322)
|.-+... ..... .....|+||.|
T Consensus 170 ~I~~~~~-~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 170 GIPPVKK-DTHPSHYVRGRRISLTF 193 (194)
T ss_dssp EE-S-SC-EEEESTEE-S-EEEEEE
T ss_pred EcccccC-CccccccCCCCEEEEEe
Confidence 4333221 10000 01247999976
No 39
>PRK08130 putative aldolase; Validated
Probab=59.51 E-value=13 Score=32.47 Aligned_cols=36 Identities=8% Similarity=0.155 Sum_probs=27.9
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++++.. +++ .++++++.+++.+...+.+.|||+
T Consensus 127 ~i~v~~y~~----~g~---~~la~~~~~~l~~~~~vll~nHGv 162 (213)
T PRK08130 127 HVPLIPYYR----PGD---PAIAEALAGLAARYRAVLLANHGP 162 (213)
T ss_pred ccceECCCC----CCh---HHHHHHHHHHhccCCEEEEcCCCC
Confidence 477777654 222 368888999999999999999995
No 40
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=58.08 E-value=14 Score=31.44 Aligned_cols=36 Identities=22% Similarity=0.443 Sum_probs=28.1
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++++.. .++ .++++++.+++.+...+.|.|||+
T Consensus 120 ~v~v~~~~~----~g~---~~la~~~~~~l~~~~~vll~nHGv 155 (184)
T PRK08333 120 KIPILPFRP----AGS---VELAEQVAEAMKEYDAVIMERHGI 155 (184)
T ss_pred CEeeecCCC----CCc---HHHHHHHHHHhccCCEEEEcCCCC
Confidence 588888764 223 367888999999888999999996
No 41
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=50.55 E-value=21 Score=31.38 Aligned_cols=36 Identities=14% Similarity=0.151 Sum_probs=28.1
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++++.. +++ .++++.+.+++.+...+.|.|||+
T Consensus 127 ~v~~~~y~~----~gs---~ela~~v~~~l~~~~~vlL~nHGv 162 (217)
T PRK05874 127 DVRCTEYAA----SGT---PEVGRNAVRALEGRAAALIANHGL 162 (217)
T ss_pred ceeeecCCC----CCc---HHHHHHHHHHhCcCCEEEEcCCCC
Confidence 477777653 223 478889999999999999999995
No 42
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=48.29 E-value=28 Score=33.00 Aligned_cols=50 Identities=12% Similarity=0.004 Sum_probs=35.8
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHh
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEEL 65 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 65 (322)
.++|.||++.+ + .+ ...+.++.+++.++|++.+.|-.++.+.+. +.++.|
T Consensus 108 ~~~~~~d~~~~-~-~~----~~~~~~~~~~l~~~G~v~~rg~~~~~~~~~---~~~~~~ 157 (366)
T TIGR02409 108 LSLPKFDHEAV-M-KD----DSVLLDWLSAVRDVGIAVLKGAPTKPGAVE---KLGKRI 157 (366)
T ss_pred ccCCceeHHHH-h-CC----HHHHHHHHHHHHhccEEEEeCCCCCHHHHH---HHHHHh
Confidence 56888888763 2 12 246788999999999999999988765443 344444
No 43
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=43.99 E-value=1.2e+02 Score=28.28 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=32.4
Q ss_pred EEcCCCCCeEEeEhhHHHHHHhCCC-ccCCCceeecCCCCCceEEEEeccCCCc
Q 044747 223 IDVEPSPSSFIVMAGDALMAWGNDR-IRPCRHQVIMDNASETRYSLGLFSFSSG 275 (322)
Q Consensus 223 ~~V~p~~g~~vVnvGd~l~~~TnG~-~ks~~HRVv~~~~~~~R~Si~~F~~P~~ 275 (322)
+.|+|..|..|+.-= ...||. =..++|.+.. -....++++...++-..
T Consensus 206 l~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcP-Vi~G~Kw~atkWi~~~~ 254 (310)
T PLN00052 206 LAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCP-VIEGEKWSAPKWIHIRS 254 (310)
T ss_pred eEeccCcceEEEEec----cCCCCCCCcccccCCCe-eecCeEEEEEEeeeccc
Confidence 789999998776432 113443 3567888655 44568999998887655
No 44
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=42.11 E-value=44 Score=29.14 Aligned_cols=67 Identities=19% Similarity=0.244 Sum_probs=40.6
Q ss_pred ceeeecccccCCCC-CCCCCccccccCCCCceEEeeCCCCCceEEEc-CCCCeEEcCCCCCeEEeEhhHHHHHHh
Q 044747 172 NYLLRYFKYRAPEP-NETKMGLTPHTDKTMTSIIHQINHINGLQVQA-KDGEWIDVEPSPSSFIVMAGDALMAWG 244 (322)
Q Consensus 172 ~~~lr~~~Yp~~~~-~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~-~~g~W~~V~p~~g~~vVnvGd~l~~~T 244 (322)
...+|.+||.|... ++-...+..+ -..+.| +..+-..+.. +.|.=+.|||--|+.++|+||-=-.+.
T Consensus 89 ~G~~~~~H~Hp~ade~E~y~vi~G~-----g~m~v~-~~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~pLvf~ 157 (209)
T COG2140 89 PGAMRELHYHPNADEPEIYYVLKGE-----GRMLVQ-KPEGEARVIAVRAGDVIYVPPGYGHYTINTGDEPLVFL 157 (209)
T ss_pred CCcccccccCCCCCcccEEEEEecc-----EEEEEE-cCCCcEEEEEecCCcEEEeCCCcceEeecCCCCCEEEE
Confidence 45688999987654 2233333322 234555 4444444432 347788899999999999998543333
No 45
>COG0325 Predicted enzyme with a TIM-barrel fold [General function prediction only]
Probab=41.22 E-value=2.6e+02 Score=24.84 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHhcc-----EEEEEc------CCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCceeeeecCCCCC
Q 044747 25 TWLSTCKDVRHAFEEFG-----CFEAIY------QKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIP 93 (322)
Q Consensus 25 ~~~~~~~~l~~A~~~~G-----Ff~l~n------hGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~~~d 93 (322)
+|.+++++|.+...+.| |+||.. ||++++.+..+.+..+++-+| ..+|-....+
T Consensus 101 Dr~klA~~l~kra~~~~~~l~v~iQVNi~~E~sK~G~~~~e~~~~~~~~~~~~~L------------~l~GLM~ipp--- 165 (228)
T COG0325 101 DRLKLAKELNKRALELPKPLNVLIQVNISGEESKSGVPPEELDELAQEVQELPNL------------ELRGLMTIPP--- 165 (228)
T ss_pred CHHHHHHHHHHHHHhCCCCceEEEEEecCCccccCCCCHHHHHHHHHHHHhCCCC------------eEeEEEeeCC---
Confidence 35677777777777766 666643 778777777776666554332 2334332211
Q ss_pred ceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHH----HHHcCCCCcchhhhc
Q 044747 94 LYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRML----FESYGVEGYYDSYIG 169 (322)
Q Consensus 94 ~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l----~~~Lgl~~~~~~~~~ 169 (322)
..|.. +....+++.+.++...+.... ..++|+.+.|.....
T Consensus 166 ---------------------~~~d~--------------~~~~~~F~~l~~l~~~l~~~~~~~~~LSMGMS~D~e~AI~ 210 (228)
T COG0325 166 ---------------------LTDDP--------------EEIFAVFRKLRKLFDELKAKYPPIDELSMGMSNDYEIAIA 210 (228)
T ss_pred ---------------------CCCCH--------------HHHHHHHHHHHHHHHHHHHhcCCCCeecCcCcccHHHHHH
Confidence 01110 556667777887777776653 245677755666666
Q ss_pred Ccceeeec
Q 044747 170 SVNYLLRY 177 (322)
Q Consensus 170 ~~~~~lr~ 177 (322)
.+.+++|+
T Consensus 211 ~GaT~VRI 218 (228)
T COG0325 211 EGATMVRI 218 (228)
T ss_pred cCCCEEEE
Confidence 66666665
No 46
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=40.16 E-value=33 Score=29.91 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=26.1
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++++.. +++ .++++.+.+++.+...+.|.|||+
T Consensus 124 ~i~~~~y~~----~gs---~~la~~v~~~l~~~~~vll~nHGv 159 (214)
T PRK06833 124 NVRCAEYAT----FGT---KELAENAFEAMEDRRAVLLANHGL 159 (214)
T ss_pred CeeeccCCC----CCh---HHHHHHHHHHhCcCCEEEECCCCC
Confidence 466665532 222 357788889999999999999995
No 47
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=38.80 E-value=22 Score=29.95 Aligned_cols=37 Identities=11% Similarity=0.226 Sum_probs=27.7
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHH-hccEEEEEcCCC
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFE-EFGCFEAIYQKI 50 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~-~~GFf~l~nhGi 50 (322)
..||+|+.... ++ ..++++|.+++. +...+.+.|||+
T Consensus 122 ~~v~~~~~~~~----~~---~~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAPP----GS---EELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THST----TC---HHHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeeccccc----cc---hhhhhhhhhhhcCCceEEeecCCce
Confidence 46889888652 22 246788999998 889999999995
No 48
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=38.66 E-value=39 Score=30.84 Aligned_cols=37 Identities=5% Similarity=-0.014 Sum_probs=27.4
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKIS 51 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~ 51 (322)
.||++.+.. .++ .++++.+.+++.+...+.+.|||+-
T Consensus 179 ~i~vvpy~~----pgs---~eLa~~v~~~l~~~~avLL~nHGvv 215 (274)
T PRK03634 179 GVGIVPWMV----PGT---DEIGQATAEKMQKHDLVLWPKHGVF 215 (274)
T ss_pred ceeEecCCC----CCC---HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 467776653 233 3678889999998899999999963
No 49
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=38.45 E-value=47 Score=28.04 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=26.3
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++ ... .++ .++++.+.+++.+.-.+.|.|||+
T Consensus 115 ~ipv~-~~~----~~~---~~la~~v~~~l~~~~~vll~nHG~ 149 (181)
T PRK08660 115 TIPVV-GGD----IGS---GELAENVARALSEHKGVVVRGHGT 149 (181)
T ss_pred CEeEE-eCC----CCC---HHHHHHHHHHHhhCCEEEEcCCCc
Confidence 57887 322 233 367888999999999999999995
No 50
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=37.64 E-value=46 Score=29.05 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=27.1
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++.+.. .++ .++++++.+++.+...+.+.|||+
T Consensus 122 ~v~~~~y~~----~gs---~~la~~~~~~l~~~~~vLl~nHGv 157 (215)
T PRK08087 122 SIPCAPYAT----FGT---RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_pred CceeecCCC----CCC---HHHHHHHHHHhCcCCEEEecCCCC
Confidence 477777653 223 357788889998888999999996
No 51
>PRK06755 hypothetical protein; Validated
Probab=37.53 E-value=38 Score=29.60 Aligned_cols=36 Identities=17% Similarity=0.091 Sum_probs=26.3
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||+|+.... ++ ..+++.+.+++++...+.|.|||+
T Consensus 136 ~IPiv~~~~~----~~---~~la~~~~~~~~~~~avLl~~HGv 171 (209)
T PRK06755 136 TIPIVEDEKK----FA---DLLENNVPNFIEGGGVVLVHNYGM 171 (209)
T ss_pred EEEEEeCCCc----hh---HHHHHHHHhhccCCCEEEEcCCCe
Confidence 5899987641 12 356666777777888899999996
No 52
>PRK00819 RNA 2'-phosphotransferase; Reviewed
Probab=36.51 E-value=13 Score=31.69 Aligned_cols=46 Identities=20% Similarity=0.445 Sum_probs=32.9
Q ss_pred CCCceEEEcCCCCeEEcCCCCCeEEeEhhHHHHHHh---CCCccCCCceeecCCCCCceEEEE
Q 044747 209 HINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWG---NDRIRPCRHQVIMDNASETRYSLG 268 (322)
Q Consensus 209 ~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~T---nG~~ks~~HRVv~~~~~~~R~Si~ 268 (322)
..-||++ +.+| |++|. |+|+... .+.=+..+++||. ..++.||++-
T Consensus 22 ~~~GL~l-d~~G-~v~v~-----------~Ll~~~~~~~~~~t~~~l~~vV~-~d~K~Rf~l~ 70 (179)
T PRK00819 22 EAIGLTL-DEEG-WVDID-----------ALIEALAKAYKWVTRELLEAVVE-SDDKGRFEIS 70 (179)
T ss_pred HHcCCcc-CCCC-CEEHH-----------HHHHHHHHccCCCCHHHHHHHHH-cCCCcceEec
Confidence 4568887 7676 97765 7776653 2234556889999 7778999996
No 53
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=34.87 E-value=28 Score=23.19 Aligned_cols=27 Identities=26% Similarity=0.446 Sum_probs=20.3
Q ss_pred EEcCCCCeEEcCCCCCeEEeEhhHHHHHHh
Q 044747 215 VQAKDGEWIDVEPSPSSFIVMAGDALMAWG 244 (322)
Q Consensus 215 v~~~~g~W~~V~p~~g~~vVnvGd~l~~~T 244 (322)
|++++|+++.|+-.++ +.+|+..+.-.
T Consensus 10 VlT~dGeF~~ik~~~~---~~vG~eI~~~~ 36 (56)
T PF12791_consen 10 VLTPDGEFIKIKRKPG---MEVGQEIEFDE 36 (56)
T ss_pred EEcCCCcEEEEeCCCC---CcccCEEEEec
Confidence 5678999999998888 77777554433
No 54
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=34.30 E-value=58 Score=29.65 Aligned_cols=36 Identities=14% Similarity=0.077 Sum_probs=27.2
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++.+.. +++. ++++.+.+++++..-+.|.|||+
T Consensus 177 ~i~vvp~~~----pGs~---eLA~~v~~~l~~~~avLL~nHGv 212 (270)
T TIGR02624 177 GVGIIPWMV----PGTN---EIGEATAEKMKEHRLVLWPHHGI 212 (270)
T ss_pred ccccccCcC----CCCH---HHHHHHHHHhccCCEEEEcCCCC
Confidence 366666543 3333 68888999999999999999995
No 55
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=31.32 E-value=40 Score=24.45 Aligned_cols=21 Identities=10% Similarity=-0.038 Sum_probs=17.5
Q ss_pred HHHHHHHHhccEEEEEcCCCC
Q 044747 31 KDVRHAFEEFGCFEAIYQKIS 51 (322)
Q Consensus 31 ~~l~~A~~~~GFf~l~nhGi~ 51 (322)
+.|..-|.+.||.||.-|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 468889999999999777654
No 56
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=30.93 E-value=67 Score=30.45 Aligned_cols=51 Identities=16% Similarity=0.155 Sum_probs=34.8
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhh
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELF 66 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF 66 (322)
.+|.+|+..+ +.+++ +.+.++.+++.++|+..+.|-.++.+.+.+ .++.|-
T Consensus 100 ~~~~~~~~~~-~~~~d----~~l~~~l~~l~~~G~v~~~g~~~~~~~~~~---~a~riG 150 (362)
T TIGR02410 100 KDPSVHFKTT-YDHTD----STLKSFSKNIYKYGFTFVDNVPVTPEATEK---LCERIS 150 (362)
T ss_pred cCCceeHHHH-hccCH----HHHHHHHHHHHhhCEEEEcCCCCCHHHHHH---HHHHhc
Confidence 3577777653 22112 467899999999999999999887655543 444543
No 57
>PRK06357 hypothetical protein; Provisional
Probab=30.29 E-value=77 Score=27.73 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=24.8
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhc------cEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEF------GCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~------GFf~l~nhGi 50 (322)
.||++.+.. .++ .++++.+.+++++. ..+.|.|||+
T Consensus 130 ~i~~~p~~~----~gs---~ela~~v~~~l~~~~~~~~~~~vLl~nHGv 171 (216)
T PRK06357 130 KIPTLPFAP----ATS---PELAEIVRKHLIELGDKAVPSAFLLNSHGI 171 (216)
T ss_pred CcceecccC----CCc---HHHHHHHHHHHhhcCcccCCCEEEECCCCC
Confidence 467776653 122 36777888888764 4889999995
No 58
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=30.24 E-value=57 Score=28.41 Aligned_cols=23 Identities=4% Similarity=-0.002 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhccEEEEEcCCC
Q 044747 28 STCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 28 ~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
++++.+.+++.+...+.|.|||+
T Consensus 134 ~la~~v~~~~~~~~~vLL~nHG~ 156 (214)
T TIGR01086 134 KLASEVVAGILKSKAILLLHHGL 156 (214)
T ss_pred HHHHHHHHHhhhCCEEehhcCCC
Confidence 57788888888889999999995
No 59
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=28.27 E-value=1.8e+02 Score=23.49 Aligned_cols=39 Identities=5% Similarity=0.113 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHHH
Q 044747 26 WLSTCKDVRHAFEEFGCFEAIY-QKISQEFRSEVLASTEE 64 (322)
Q Consensus 26 ~~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 64 (322)
....++++.+.++++.++++.+ +|++...+.++....+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 4568899999999998888876 58998888777766554
No 60
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=27.79 E-value=63 Score=28.25 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=26.0
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHH--HhccEEEEEcCCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAF--EEFGCFEAIYQKIS 51 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~--~~~GFf~l~nhGi~ 51 (322)
.||++.+... ++ .++++++.+++ .+...+.|.|||+-
T Consensus 130 ~ip~~~y~~~----g~---~ela~~i~~~l~~~~~~~vll~nHG~~ 168 (221)
T PRK06557 130 PIPVGPFALI----GD---EAIGKGIVETLKGGRSPAVLMQNHGVF 168 (221)
T ss_pred CeeccCCcCC----Cc---HHHHHHHHHHhCcCCCCEEEECCCCce
Confidence 4677665431 22 35678888888 67788999999963
No 61
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=27.10 E-value=80 Score=26.96 Aligned_cols=24 Identities=8% Similarity=-0.051 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHH---hccEEEEEcCCC
Q 044747 27 LSTCKDVRHAFE---EFGCFEAIYQKI 50 (322)
Q Consensus 27 ~~~~~~l~~A~~---~~GFf~l~nhGi 50 (322)
.++++.+.++++ +...+.|.|||+
T Consensus 137 ~ela~~~~~~l~~~~~~~avll~nHGv 163 (193)
T TIGR03328 137 ARLADSVAPYLEAYPDVPGVLIRGHGL 163 (193)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEcCCcc
Confidence 467888888886 468899999996
No 62
>PRK05834 hypothetical protein; Provisional
Probab=26.38 E-value=81 Score=27.09 Aligned_cols=23 Identities=4% Similarity=-0.077 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhcc--EEEEEcCCC
Q 044747 28 STCKDVRHAFEEFG--CFEAIYQKI 50 (322)
Q Consensus 28 ~~~~~l~~A~~~~G--Ff~l~nhGi 50 (322)
..++.+.+++.+.. .+.|.|||+
T Consensus 136 ~la~~v~~~l~~~~~~avLL~nHGv 160 (194)
T PRK05834 136 RADTEILRYLQEKNKNFVVIKGYGV 160 (194)
T ss_pred hHHHHHHHHHhhcCCCEEEEcCCcc
Confidence 35677888888755 899999995
No 63
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=25.90 E-value=54 Score=21.55 Aligned_cols=42 Identities=12% Similarity=0.221 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCC
Q 044747 28 STCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVP 69 (322)
Q Consensus 28 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp 69 (322)
..+..|...+...||......|+-.+...+++..-+..+.|+
T Consensus 3 ~~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~ 44 (57)
T PF01471_consen 3 PDVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLP 44 (57)
T ss_dssp HHHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcC
Confidence 356788899999999855556777777777777788888776
No 64
>TIGR00222 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase. Members of this family are 3-methyl-2-oxobutanoate hydroxymethyltransferase, the first enzyme of the pantothenate biosynthesis pathway. An alternate name is ketopantoate hydroxymethyltransferase.
Probab=25.11 E-value=2.4e+02 Score=25.67 Aligned_cols=37 Identities=14% Similarity=0.111 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHH
Q 044747 24 STWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLA 60 (322)
Q Consensus 24 ~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~ 60 (322)
+++...+-+-.+|+++-|.|-|.--+|+.++.+.+.+
T Consensus 156 ~~~a~~~i~~A~a~e~AGA~~ivlE~vp~~~a~~It~ 192 (263)
T TIGR00222 156 EEAAKKLLEDALALEEAGAQLLVLECVPVELAAKITE 192 (263)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCCcHHHHHHHHH
Confidence 3333333333458899999999999999877666544
No 65
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=24.80 E-value=58 Score=22.18 Aligned_cols=39 Identities=28% Similarity=0.531 Sum_probs=25.6
Q ss_pred CCCccccccCCCCc---eEEeeCC------CCCceEEEcCCCCeEEcC
Q 044747 188 TKMGLTPHTDKTMT---SIIHQIN------HINGLQVQAKDGEWIDVE 226 (322)
Q Consensus 188 ~~~g~~~HtD~g~l---TlL~q~d------~~~GLqv~~~~g~W~~V~ 226 (322)
+.-|.-|-+|-.++ |+|-..| -..-|||+..+|-|.+|.
T Consensus 14 nsnG~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGpWqdik 61 (64)
T PF06820_consen 14 NSNGWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGPWQDIK 61 (64)
T ss_pred cCCccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCChhhcc
Confidence 34567778885544 4552211 135699999999999886
No 66
>COG3695 Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]
Probab=24.65 E-value=37 Score=26.00 Aligned_cols=28 Identities=25% Similarity=0.236 Sum_probs=19.4
Q ss_pred hhHHHHHHhCCCccCCCceeecCCCCCceEEE
Q 044747 236 AGDALMAWGNDRIRPCRHQVIMDNASETRYSL 267 (322)
Q Consensus 236 vGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si 267 (322)
||-+|..++.|..- ++|||++ . ..|.|+
T Consensus 42 VG~il~~l~~~s~l-PWhRVvn-s--~G~isl 69 (103)
T COG3695 42 VGRILKHLPEGSDL-PWHRVVN-S--DGRISL 69 (103)
T ss_pred HHHHHhhCCCCCCC-Chhheec-C--CCcccC
Confidence 67777777776554 6999999 3 245554
No 67
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=23.43 E-value=39 Score=19.49 Aligned_cols=18 Identities=28% Similarity=0.058 Sum_probs=13.0
Q ss_pred EEEEcCCCCHHHHHHHHH
Q 044747 43 FEAIYQKISQEFRSEVLA 60 (322)
Q Consensus 43 f~l~nhGi~~~~~~~~~~ 60 (322)
.||+.||++.+.+++-++
T Consensus 9 rYV~eh~ls~ee~~~RL~ 26 (28)
T PF12368_consen 9 RYVKEHGLSEEEVAERLA 26 (28)
T ss_pred hhHHhcCCCHHHHHHHHH
Confidence 477889999887765443
No 68
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=22.86 E-value=1.9e+02 Score=23.97 Aligned_cols=39 Identities=5% Similarity=0.153 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhccEEEEE-cCCCCHHHHHHHHHHHHH
Q 044747 26 WLSTCKDVRHAFEEFGCFEAI-YQKISQEFRSEVLASTEE 64 (322)
Q Consensus 26 ~~~~~~~l~~A~~~~GFf~l~-nhGi~~~~~~~~~~~~~~ 64 (322)
....+++|.+.+.++-.++|+ .+|++...++++....+.
T Consensus 3 K~~~v~~l~e~l~~y~~v~iv~~~gl~~~ql~~iR~~lr~ 42 (163)
T cd05796 3 KQKLVENIREAVDKYKYIYVFSVDNMRNNKLKDIRQEWKD 42 (163)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCCHHHHHHHHHHhcC
Confidence 457889999999999877766 579999988888876553
No 69
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=22.74 E-value=64 Score=27.87 Aligned_cols=39 Identities=10% Similarity=0.090 Sum_probs=26.9
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
..||++++.... .++ .+.++.+.+++.+.-.+.+.|||+
T Consensus 121 ~~ip~~~~~~~~--~~~---~~la~~~~~~l~~~~~vll~nHG~ 159 (209)
T cd00398 121 GDIPCTPYMTPE--TGE---DEIGTQRALGFPNSKAVLLRNHGL 159 (209)
T ss_pred CCeeecCCcCCC--ccH---HHHHHHHhcCCCcCCEEEEcCCCC
Confidence 358888876521 122 355667777778888999999995
No 70
>KOG2107 consensus Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=22.45 E-value=88 Score=26.23 Aligned_cols=29 Identities=24% Similarity=0.470 Sum_probs=24.5
Q ss_pred CCCCceEEEcCCCCeEEcCCCCCeEEeEh
Q 044747 208 NHINGLQVQAKDGEWIDVEPSPSSFIVMA 236 (322)
Q Consensus 208 d~~~GLqv~~~~g~W~~V~p~~g~~vVnv 236 (322)
++.+=+-|++++++||.|....|-+||.-
T Consensus 101 ~GtgYfDVrd~dd~WIRi~vekGDlivlP 129 (179)
T KOG2107|consen 101 EGTGYFDVRDKDDQWIRIFVEKGDLIVLP 129 (179)
T ss_pred ecceEEeeccCCCCEEEEEEecCCEEEec
Confidence 36677889999999999999999888764
No 71
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=22.42 E-value=1.1e+02 Score=21.00 Aligned_cols=38 Identities=11% Similarity=0.201 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhcc--EEEEEc------CCCCHHHHHHHHHHHHH
Q 044747 27 LSTCKDVRHAFEEFG--CFEAIY------QKISQEFRSEVLASTEE 64 (322)
Q Consensus 27 ~~~~~~l~~A~~~~G--Ff~l~n------hGi~~~~~~~~~~~~~~ 64 (322)
.+....|.+.++++| .+.++. +||+.+.+.++++..++
T Consensus 23 ~~~l~~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 23 AEQLRALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp HHHHHHHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 356778888888887 777764 66888888888776543
No 72
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=21.82 E-value=4.2e+02 Score=22.21 Aligned_cols=60 Identities=10% Similarity=0.192 Sum_probs=35.0
Q ss_pred eeecccccCCCCCCCCCccccccCCCCce---EEeeC-CCCCc-eEEE--cCCCCeEEcCCCCCeEEeEhhHH
Q 044747 174 LLRYFKYRAPEPNETKMGLTPHTDKTMTS---IIHQI-NHING-LQVQ--AKDGEWIDVEPSPSSFIVMAGDA 239 (322)
Q Consensus 174 ~lr~~~Yp~~~~~~~~~g~~~HtD~g~lT---lL~q~-d~~~G-Lqv~--~~~g~W~~V~p~~g~~vVnvGd~ 239 (322)
..-+|+|++- -+++.|.|-.-+. .+..- =+.+. +.+. ..+++...+.-.+|.++|.-|+.
T Consensus 96 ~~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 96 ACLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred EEEEEeecCC------CccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 4568889653 3799999953221 11110 01111 2221 12455888999999999998873
No 73
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=21.63 E-value=3e+02 Score=22.42 Aligned_cols=39 Identities=8% Similarity=0.036 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHHH
Q 044747 26 WLSTCKDVRHAFEEFGCFEAIY-QKISQEFRSEVLASTEE 64 (322)
Q Consensus 26 ~~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 64 (322)
....+++|.+.+++..++++.+ +|++...+.++....+.
T Consensus 5 K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 5 KEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 4578889999999998777765 58988888877776663
No 74
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=21.60 E-value=1.5e+02 Score=25.77 Aligned_cols=30 Identities=17% Similarity=0.189 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhccEEEEEcCCCCHHHHHH
Q 044747 28 STCKDVRHAFEEFGCFEAIYQKISQEFRSE 57 (322)
Q Consensus 28 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~ 57 (322)
..+++|.+++.+.||+.|.|-.++.+.+.+
T Consensus 24 ~~~~~~~~~l~~~G~vvlrg~~~~~~~~~~ 53 (258)
T PF02668_consen 24 EELEELREALAEYGFVVLRGFPLDPEQFEA 53 (258)
T ss_dssp CHHHHHHHHHHHHSEEEEESCTSSHHHHHH
T ss_pred HHHHHHHHHHhcccEEEEcCCCCCHHHHHH
Confidence 478899999999999999988876655544
No 75
>PLN02424 ketopantoate hydroxymethyltransferase
Probab=21.52 E-value=2.8e+02 Score=26.06 Aligned_cols=30 Identities=17% Similarity=0.439 Sum_probs=23.5
Q ss_pred HHHHHHHHhccEEEEEcCCCCHHHHHHHHH
Q 044747 31 KDVRHAFEEFGCFEAIYQKISQEFRSEVLA 60 (322)
Q Consensus 31 ~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~ 60 (322)
-+-..|+++-|.|-|+--+||.++.+.+.+
T Consensus 185 i~dA~ale~AGAf~ivLE~Vp~~la~~It~ 214 (332)
T PLN02424 185 VETALALQEAGCFAVVLECVPAPVAAAITS 214 (332)
T ss_pred HHHHHHHHHcCCcEEEEcCCcHHHHHHHHH
Confidence 334457899999999999999987766544
No 76
>PRK00311 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed
Probab=21.34 E-value=2.4e+02 Score=25.60 Aligned_cols=38 Identities=18% Similarity=0.263 Sum_probs=25.7
Q ss_pred chhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHH
Q 044747 23 TSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLA 60 (322)
Q Consensus 23 ~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~ 60 (322)
++++...+-+-.+|+++-|.|.|.--+++.++.+.+.+
T Consensus 156 t~~~a~~~i~ra~a~~eAGA~~i~lE~v~~~~~~~i~~ 193 (264)
T PRK00311 156 DEEAAEKLLEDAKALEEAGAFALVLECVPAELAKEITE 193 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHHH
Confidence 33333333344457899999999999998876665443
No 77
>cd05795 Ribosomal_P0_L10e Ribosomal protein L10 family, P0 and L10e subfamily; composed of eukaryotic 60S ribosomal protein P0 and the archaeal P0 homolog, L10e. P0 or L10e forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-interacting protein (WIP). These eukaryotic and archaeal P0 sequences have an additional C-terminal domain homologous with acidic proteins P1 and P2.
Probab=20.85 E-value=2.5e+02 Score=23.59 Aligned_cols=39 Identities=3% Similarity=0.003 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHHH
Q 044747 26 WLSTCKDVRHAFEEFGCFEAIY-QKISQEFRSEVLASTEE 64 (322)
Q Consensus 26 ~~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 64 (322)
....+++|.+.+.++-.++|.+ .|++...++++....++
T Consensus 3 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 42 (175)
T cd05795 3 KKEYVEKLTELLKSYPKVLIVDADNVGSKQLQKIRRSLRG 42 (175)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCChHHHHHHHHHhhC
Confidence 4578899999999998777764 79999888888876664
No 78
>PF08823 PG_binding_2: Putative peptidoglycan binding domain; InterPro: IPR014927 This entry may be a peptidoglycan binding domain.
Probab=20.68 E-value=1.4e+02 Score=21.42 Aligned_cols=35 Identities=14% Similarity=0.310 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHH
Q 044747 27 LSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLAS 61 (322)
Q Consensus 27 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~ 61 (322)
..+++.|.++++..||..=.-||.-.+..++++..
T Consensus 15 ~~~~~evq~~L~~lGyy~g~~~g~~d~a~~~Al~~ 49 (74)
T PF08823_consen 15 GDVAREVQEALKRLGYYKGEADGVWDEATEDALRA 49 (74)
T ss_pred HHHHHHHHHHHHHcCCccCCCCCcccHHHHHHHHH
Confidence 36889999999999997767788766666655543
No 79
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=20.57 E-value=2.5e+02 Score=25.49 Aligned_cols=37 Identities=14% Similarity=-0.000 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHHH
Q 044747 28 STCKDVRHAFEEFGCFEAIY-QKISQEFRSEVLASTEE 64 (322)
Q Consensus 28 ~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 64 (322)
+...++.+-|.+.|.-.|++ .|.+++.++.+.++++.
T Consensus 80 ~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 80 EATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred hhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 45667888899999888887 59999999988888776
No 80
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=20.44 E-value=1.8e+02 Score=22.71 Aligned_cols=37 Identities=16% Similarity=-0.005 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHHH
Q 044747 28 STCKDVRHAFEEFGCFEAIY-QKISQEFRSEVLASTEE 64 (322)
Q Consensus 28 ~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 64 (322)
+.+....+.|.+.|.=.|++ .|.+++.++.+.+.++.
T Consensus 78 ~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 78 DAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKK 115 (124)
T ss_dssp HHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTT
T ss_pred HHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 46677777888889988886 59988888877776553
No 81
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=20.41 E-value=3.3e+02 Score=24.55 Aligned_cols=43 Identities=9% Similarity=0.053 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHHHHhccE--EEEE-cCCCCHHHHHHHHHHHHHhhC
Q 044747 25 TWLSTCKDVRHAFEEFGC--FEAI-YQKISQEFRSEVLASTEELFD 67 (322)
Q Consensus 25 ~~~~~~~~l~~A~~~~GF--f~l~-nhGi~~~~~~~~~~~~~~fF~ 67 (322)
.-......+.+++..+|| |+++ +||=....++.+.+..+.-+.
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~~ 132 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAELG 132 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEecCCCcHHHHHHHHHHHHHhcc
Confidence 345677889999999998 5555 588666666666665555544
Done!