Query 044747
Match_columns 322
No_of_seqs 214 out of 1202
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 10:53:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044747.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044747hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 5.2E-78 1.8E-82 558.2 28.6 291 6-310 4-311 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 2.9E-74 9.7E-79 541.7 28.0 284 7-307 45-344 (356)
3 1odm_A Isopenicillin N synthas 100.0 6.8E-74 2.3E-78 534.6 27.7 285 1-307 1-323 (331)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 9.6E-75 3.3E-79 537.0 19.2 279 7-307 2-292 (319)
5 1dcs_A Deacetoxycephalosporin 100.0 8E-71 2.7E-75 509.5 17.9 268 7-308 3-305 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 4.7E-68 1.6E-72 483.9 27.1 255 7-310 2-279 (280)
7 2rg4_A Uncharacterized protein 94.1 0.71 2.4E-05 39.3 12.0 44 220-275 166-209 (216)
8 3dkq_A PKHD-type hydroxylase S 93.6 0.077 2.6E-06 46.3 5.0 81 172-272 98-194 (243)
9 3itq_A Prolyl 4-hydroxylase, a 89.1 1.2 4.2E-05 37.8 7.7 101 150-272 95-211 (216)
10 2hbt_A EGL nine homolog 1; pro 87.7 0.78 2.7E-05 39.9 5.6 187 28-273 14-213 (247)
11 2jig_A Prolyl-4 hydroxylase; h 86.6 1.3 4.5E-05 37.6 6.4 47 222-273 170-217 (224)
12 2iuw_A Alkylated repair protei 76.7 6.3 0.00022 33.8 7.1 83 174-271 127-228 (238)
13 3tht_A Alkylated DNA repair pr 70.9 5.5 0.00019 36.3 5.4 94 174-275 199-315 (345)
14 3s57_A Alpha-ketoglutarate-dep 69.1 10 0.00036 31.6 6.5 81 175-270 102-200 (204)
15 3i3q_A Alpha-ketoglutarate-dep 64.7 7.3 0.00025 32.8 4.6 81 174-271 106-201 (211)
16 2dbn_A Hypothetical protein YB 48.9 9.1 0.00031 36.1 2.7 54 6-67 98-151 (461)
17 3o2g_A Gamma-butyrobetaine dio 44.1 12 0.00041 34.5 2.7 52 8-68 122-173 (388)
18 1m5a_B Insulin B chain; alpha 40.9 30 0.001 19.5 2.9 18 28-45 10-27 (30)
19 2opi_A L-fuculose-1-phosphate 40.1 16 0.00054 30.5 2.7 36 8-50 125-160 (212)
20 4ay7_A Methylcobalamin\: coenz 38.6 45 0.0016 29.9 5.7 41 27-67 304-348 (348)
21 1e4c_P L-fuculose 1-phosphate 33.6 22 0.00077 29.6 2.6 36 8-50 122-157 (215)
22 1pvt_A Sugar-phosphate aldolas 32.8 26 0.00088 29.8 2.9 37 7-50 160-196 (238)
23 2fk5_A Fuculose-1-phosphate al 32.3 41 0.0014 27.7 4.0 51 8-65 117-176 (200)
24 1otj_A Alpha-ketoglutarate-dep 32.1 40 0.0014 29.1 4.1 48 8-65 17-64 (283)
25 2irp_A Putative aldolase class 28.5 26 0.0009 29.0 2.2 35 8-50 139-176 (208)
26 2v9l_A Rhamnulose-1-phosphate 27.0 27 0.00092 30.5 2.0 36 8-50 179-214 (274)
27 1e5r_A Proline oxidase; oxidor 26.3 80 0.0027 27.8 4.9 64 191-271 103-175 (290)
28 1oih_A Putative alkylsulfatase 25.7 59 0.002 28.4 4.1 37 28-67 40-77 (301)
29 1zav_A 50S ribosomal protein L 22.3 1.8E+02 0.0063 23.3 6.1 40 25-64 7-47 (180)
30 2j01_J 50S ribosomal protein L 21.6 1.9E+02 0.0064 23.0 6.0 39 26-64 6-46 (173)
31 2vf9_A Coat protein; virion, R 21.5 15 0.00052 26.5 -0.6 29 225-257 38-66 (131)
32 3pvj_A Alpha-ketoglutarate-dep 21.1 69 0.0024 27.7 3.5 48 8-65 15-62 (277)
33 3jsy_A Acidic ribosomal protei 20.5 1.6E+02 0.0056 24.4 5.6 40 25-64 4-44 (213)
34 2rdq_A 1-deoxypentalenic acid 20.3 98 0.0034 26.4 4.4 37 30-67 21-57 (288)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=5.2e-78 Score=558.22 Aligned_cols=291 Identities=18% Similarity=0.271 Sum_probs=258.7
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCcee
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFE 84 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G 84 (322)
+.+||||||+.+ . .++++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...+|
T Consensus 4 ~~~iPvIDls~~--~---~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~G 78 (312)
T 3oox_A 4 TSAIDPVSFSLY--A---KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARG 78 (312)
T ss_dssp CCSSCCEETHHH--H---HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSE
T ss_pred CCCCCeEEChHh--c---ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccc
Confidence 568999999974 2 14678999999999999999999999999999999999999999999999999864 46799
Q ss_pred eeecCC-------CCCceeeeecCCCCC--chhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 044747 85 YYGQYT-------IIPLYESLAIDYPDT--RNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLF 155 (322)
Q Consensus 85 Y~~~~~-------~~d~~E~~~~~~~~~--~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~ 155 (322)
|.+.+. ..|++|.|.++.... ......+.+|.||+.+|+|| +++++|+++|.+|+.+||++|+
T Consensus 79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr--------~~~~~y~~~~~~l~~~ll~~la 150 (312)
T 3oox_A 79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFK--------HDVSWLYNSLDGMGGKVLEAIA 150 (312)
T ss_dssp EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHH--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHH--------HHHHHHHHHHHHHHHHHHHHHH
Confidence 987653 258999998865322 12223456789999999999 9999999999999999999999
Q ss_pred HHcCCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEe
Q 044747 156 ESYGVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIV 234 (322)
Q Consensus 156 ~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vV 234 (322)
++||++ ++|.+.+..+.+.||++||||++.++..+|+++|||+|+||||+| |+++||||++++|+|++|+|+||++||
T Consensus 151 ~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vV 229 (312)
T 3oox_A 151 TYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVI 229 (312)
T ss_dssp HHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEE
T ss_pred HHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEE
Confidence 999999 899998888889999999999987555599999999999999999 889999999999999999999999999
Q ss_pred EhhHHHHHHhCCCccCCCceeecCC---CCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCC-CccHHHHHHHHhhhc
Q 044747 235 MAGDALMAWGNDRIRPCRHQVIMDN---ASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYK-PFDHFGFLHFNQSEE 308 (322)
Q Consensus 235 nvGd~l~~~TnG~~ks~~HRVv~~~---~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~-~~t~~e~~~~~~~~~ 308 (322)
|+||+||+||||+||||+|||+.++ ...+|||++||++|+. +|.|+++|+++++|++|+ ++|++||+..|+++.
T Consensus 230 NiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 230 NIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp EECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred EhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 9999999999999999999999843 2567999999999998 999999999999999999 999999999999987
Q ss_pred cC
Q 044747 309 GK 310 (322)
Q Consensus 309 g~ 310 (322)
|.
T Consensus 310 ~l 311 (312)
T 3oox_A 310 KL 311 (312)
T ss_dssp C-
T ss_pred cc
Confidence 75
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.9e-74 Score=541.67 Aligned_cols=284 Identities=19% Similarity=0.296 Sum_probs=254.8
Q ss_pred CCCCEEEcCCCCCcCCc-hhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC---Cc
Q 044747 7 SKIPVIDLSKQDLKSGT-STWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK---PY 82 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~-~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~ 82 (322)
.+||||||+.+ .+++ ++|++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... .+
T Consensus 45 ~~iPvIDls~l--~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~ 122 (356)
T 1gp6_A 45 PQVPTIDLKNI--ESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 122 (356)
T ss_dssp CCCCEEECTTT--TCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBC
T ss_pred CCCCEEEchhc--cCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCc
Confidence 36999999985 3433 447889999999999999999999999999999999999999999999999997652 57
Q ss_pred eeeeecCC-----CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044747 83 FEYYGQYT-----IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFES 157 (322)
Q Consensus 83 ~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~ 157 (322)
+||..... ..|++|.|.+..... .....|.||+.+|+|+ +++++|+++|.+|+.+||++|+++
T Consensus 123 ~Gy~~~~~~~~~~~~d~kE~~~~~~~p~----~~~~~~~wP~~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~ 190 (356)
T 1gp6_A 123 QGYGSKLANNASGQLEWEDYFFHLAYPE----EKRDLSIWPKTPSDYI--------EATSEYAKCLRLLATKVFKALSVG 190 (356)
T ss_dssp SEEECCCCCSTTCCCCSCEEEEEEEESG----GGCCGGGSCCSSTTHH--------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcCcccCCCCCCChhheeeeecCCc----cccccccCCCcchhhh--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89986542 358999998864221 1235678999889999 999999999999999999999999
Q ss_pred cCCC-Ccchhhhc---CcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEE
Q 044747 158 YGVE-GYYDSYIG---SVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFI 233 (322)
Q Consensus 158 Lgl~-~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~v 233 (322)
||++ ++|.+.+. .+.+.||++||||++.++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|+||++|
T Consensus 191 Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~-~~g~Wi~V~p~pgalv 268 (356)
T 1gp6_A 191 LGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLF-YEGKWVTAKCVPDSIV 268 (356)
T ss_dssp TTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE-CSCCCEEEE-ETTEEEECCCCTTCEE
T ss_pred cCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE-cCCCCeEEe-cCCcEEECcCCCCeEE
Confidence 9999 88988876 4788999999999998888899999999999999999 889999997 6899999999999999
Q ss_pred eEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc---ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh
Q 044747 234 VMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG---VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE 307 (322)
Q Consensus 234 VnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~---~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~ 307 (322)
||+||+||+||||+||||+|||+. ++..+|||++||++|+. +|.|+++|+++++|++|+++|++||+..+++.
T Consensus 269 VNiGD~l~~~TnG~~kS~~HRVv~-~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~ 344 (356)
T 1gp6_A 269 MHIGDTLEILSNGKYKSILHRGLV-NKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFG 344 (356)
T ss_dssp EEECHHHHHHTTTSSCCCCEEECC-CSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred EEeccHHHHhcCCEeeccCceecC-CCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHh
Confidence 999999999999999999999999 66789999999999988 58999999999999999999999999998874
No 3
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=6.8e-74 Score=534.57 Aligned_cols=285 Identities=18% Similarity=0.229 Sum_probs=251.7
Q ss_pred CCCCCCCCCCEEEcCCCCCcCCc-hhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHh-hCCCHHHHhhcCC
Q 044747 1 MGSQTKSKIPVIDLSKQDLKSGT-STWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEEL-FDVPIEIKVKNTS 78 (322)
Q Consensus 1 m~s~~~~~iPvIDls~l~~~~~~-~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~ 78 (322)
|||.+..+||||||+.+ .+++ ++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 1 m~s~~~~~iPvIDls~l--~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~ 75 (331)
T 1odm_A 1 MGSVSKANVPKIDVSPL--FGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI 75 (331)
T ss_dssp --CCCBCCCCEEECGGG--GSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC
T ss_pred CCcccCCCCCEEEchHh--cCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh
Confidence 99998899999999984 3343 467889999999999999999999999 999999999999 9999999999975
Q ss_pred CCCceeeeecCC-------------CCCceeeeecCCCCCc--hhh----hcccCCCCCCc--cccccccCCCChHHHHH
Q 044747 79 TKPYFEYYGQYT-------------IIPLYESLAIDYPDTR--NAT----QSFTNLMWPAE--MIAFGMICPYSLLESSL 137 (322)
Q Consensus 79 ~~~~~GY~~~~~-------------~~d~~E~~~~~~~~~~--~~~----~~~~~~~wP~~--~p~f~~~~p~~~~~~~~ 137 (322)
+||.+.+. ..|++|+|.++..... ... ....+|.||+. +|+|+ ++++
T Consensus 76 ----~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr--------~~~~ 143 (331)
T 1odm_A 76 ----RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQ--------DFAE 143 (331)
T ss_dssp ----TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHH--------HHHH
T ss_pred ----cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHH--------HHHH
Confidence 57765432 3489999998753221 111 12347899987 88999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-CcchhhhcCcceeee--ccccc------C---CCCCCC-CCccccccCCCCceEE
Q 044747 138 SMSELVVELDKMVTRMLFESYGVE-GYYDSYIGSVNYLLR--YFKYR------A---PEPNET-KMGLTPHTDKTMTSII 204 (322)
Q Consensus 138 ~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL 204 (322)
+|+++|.+|+..||++|+++||++ ++|.+.++.+.+.|| ++||| | +++++. .+|+++|||+|+||||
T Consensus 144 ~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL 223 (331)
T 1odm_A 144 QYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVL 223 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEE
Confidence 999999999999999999999999 899998888899999 99999 7 666665 8999999999999999
Q ss_pred eeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCC
Q 044747 205 HQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKE 282 (322)
Q Consensus 205 ~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~ 282 (322)
+| |+++||||++++| |++|+|+||++|||+||+||+||||+||||+|||+. + ..+|||++||++|+. +|.|+++
T Consensus 224 ~q-d~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~-~~~R~Sia~F~~P~~d~~i~pl~~ 299 (331)
T 1odm_A 224 YQ-SNVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-V-NAERQSLPFFVNLGYDSVIDPFDP 299 (331)
T ss_dssp EE-CSSCCEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-C-CSCEEEEEEEECCCTTCBCCCCCT
T ss_pred ee-CCCCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-C-CCCEEEEEEEEcCCCCCEEeCCCc
Confidence 99 8899999998999 999999999999999999999999999999999997 3 679999999999998 9999999
Q ss_pred CCCCCCCCCCCCccHHHHHHHHhhh
Q 044747 283 LGDETQPLKYKPFDHFGFLHFNQSE 307 (322)
Q Consensus 283 ~~~~~~p~~y~~~t~~e~~~~~~~~ 307 (322)
++++++ ++|+++|++||++.+++.
T Consensus 300 ~~~~~~-~~y~~~t~~e~l~~~~~~ 323 (331)
T 1odm_A 300 REPNGK-SDREPLSYGDYLQNGLVS 323 (331)
T ss_dssp TSTTCC-CSSCCCBHHHHHHHHHHH
T ss_pred cccccc-cCCCCccHHHHHHHHHHH
Confidence 999888 899999999999999874
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=9.6e-75 Score=537.04 Aligned_cols=279 Identities=22% Similarity=0.295 Sum_probs=244.3
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCceeee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYY 86 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~ 86 (322)
.+||||||+.+ . .+++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||.
T Consensus 2 ~~iPvIDls~l--~--~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~ 75 (319)
T 1w9y_A 2 ENFPIISLDKV--N--GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALE 75 (319)
T ss_dssp CCCCEEEGGGG--G--STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHT
T ss_pred CCCCEEECccc--C--cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCC
Confidence 46999999985 2 245778999999999999999999999999999999999999999999999998632 34787
Q ss_pred ecCC---CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-C
Q 044747 87 GQYT---IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVE-G 162 (322)
Q Consensus 87 ~~~~---~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 162 (322)
+.+. ..|++|.|.+..... ...|.||+.+|.|| +++++|+++|.+|+.+||++|+++||++ +
T Consensus 76 ~~~~e~~~~d~ke~~~~~~~p~------~~~~~wP~~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 141 (319)
T 1w9y_A 76 GVQAEVTDMDWESTFFLKHLPI------SNISEVPDLDEEYR--------EVMRDFAKRLEKLAEELLDLLCENLGLEKG 141 (319)
T ss_dssp TCCCCGGGCCCCEEEEEEEESC------CGGGGCTTCCHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred cccccCCCCChhhheeeecCCc------ccccccccchhHHH--------HHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 5543 358999998764211 13568999889999 9999999999999999999999999999 8
Q ss_pred cchhhhc---CcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhhHH
Q 044747 163 YYDSYIG---SVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDA 239 (322)
Q Consensus 163 ~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~ 239 (322)
+|.+.+. .+.+.||++|||||+.++..+|+++|||+|+||||+|+|+++||||+ ++|+|++|+|+||++|||+||+
T Consensus 142 ~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~ 220 (319)
T 1w9y_A 142 YLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQ 220 (319)
T ss_dssp HHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHH
T ss_pred HHHHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEe-eCCeEEEcccCCCcEEEEhHHH
Confidence 8888775 35678999999999988888999999999999999994379999995 7899999999999999999999
Q ss_pred HHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCC---CCCCCCCccHHHHHHHHhhh
Q 044747 240 LMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDET---QPLKYKPFDHFGFLHFNQSE 307 (322)
Q Consensus 240 l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~---~p~~y~~~t~~e~~~~~~~~ 307 (322)
||+||||+||||+|||+. ++..+|||++||++|+. +|.|+++|++++ +|++|+++|++||+..+++.
T Consensus 221 l~~~SnG~~kS~~HRVv~-~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~ 292 (319)
T 1w9y_A 221 LEVITNGKYKSVMHRVIA-QKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGL 292 (319)
T ss_dssp HHHHTTTSSCCCCEEECC-CSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTT
T ss_pred HHHHhCCeeecccceecC-CCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhh
Confidence 999999999999999999 67789999999999998 999999999988 59999999999999988874
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=8e-71 Score=509.50 Aligned_cols=268 Identities=15% Similarity=0.194 Sum_probs=229.8
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCC-HHHHhhcCCC--CCce
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVP-IEIKVKNTST--KPYF 83 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~ 83 (322)
.+||||||+.+ .+++. .++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++... ...+
T Consensus 3 ~~iPvIDls~l--~~~~~-----~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~ 75 (311)
T 1dcs_A 3 TTVPTFSLAEL--QQGLH-----QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRR 75 (311)
T ss_dssp CCCCEEEHHHH--HTTCS-----HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSS
T ss_pred CCCcEEEchhh--cCCCH-----HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCC
Confidence 46999999974 33322 1399999999999999999999999999999999999999 9999999865 3679
Q ss_pred eeeecCC-----------CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHH
Q 044747 84 EYYGQYT-----------IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTR 152 (322)
Q Consensus 84 GY~~~~~-----------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~ 152 (322)
||.+.+. ..|++|.|.++.. +|.|| +|+|+ +.+++|+++|.+|+..||+
T Consensus 76 Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~----------~n~wP--~~~fr--------~~~~~y~~~~~~l~~~ll~ 135 (311)
T 1dcs_A 76 GFTGLESESTAQITNTGSYSDYSMCYSMGTA----------DNLFP--SGDFE--------RIWTQYFDRQYTASRAVAR 135 (311)
T ss_dssp EEEEC-----------------CEEEEECSS----------SCCCS--CHHHH--------HHHHHHHHHHHHHHHHHHH
T ss_pred ceeeccccccccccCCCCCCCcceeeeccCC----------CCCCC--ChHHH--------HHHHHHHHHHHHHHHHHHH
Confidence 9987642 3478999988753 46899 88999 9999999999999999999
Q ss_pred HHHHHcCC----C-CcchhhhcCcceeeecccccCCCCCC--C--CCccccccCCCCceEEeeCC-CCCc---eEEEcCC
Q 044747 153 MLFESYGV----E-GYYDSYIGSVNYLLRYFKYRAPEPNE--T--KMGLTPHTDKTMTSIIHQIN-HING---LQVQAKD 219 (322)
Q Consensus 153 ~l~~~Lgl----~-~~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~q~d-~~~G---Lqv~~~~ 219 (322)
+|+++||+ + ++|.+. .+.||++||||++.++ . .+|+++|||+|+||||+| | +++| |||++ +
T Consensus 136 ~la~~Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~v~G~~~LqV~~-~ 209 (311)
T 1dcs_A 136 EVLRATGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQ-TPCANGFVSLQAEV-G 209 (311)
T ss_dssp HHHHHTTCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEE-ECCTTCCCCEEEEE-T
T ss_pred HHHHHcCCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEec-CCCCCCceeEEEEe-C
Confidence 99999999 7 666554 7889999999997653 3 678999999999999999 7 8999 99988 8
Q ss_pred CCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCC----CCceEEEEeccCCCc--ceeCCCCCCCCCCCCCC-
Q 044747 220 GEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNA----SETRYSLGLFSFSSG--VVDIPKELGDETQPLKY- 292 (322)
Q Consensus 220 g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y- 292 (322)
|+|++|+|+||++|||+||+||+||||+||||+|||+.++. ..+|||++||++|+. +|. +++++++++|++|
T Consensus 210 g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~ 288 (311)
T 1dcs_A 210 GAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLD 288 (311)
T ss_dssp TEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCC
T ss_pred CEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccC
Confidence 99999999999999999999999999999999999999431 678999999999998 899 9999998899999
Q ss_pred -CCccHHHHHHHHhhhc
Q 044747 293 -KPFDHFGFLHFNQSEE 308 (322)
Q Consensus 293 -~~~t~~e~~~~~~~~~ 308 (322)
+++|++||+..+++..
T Consensus 289 ~~~~t~~ey~~~~~~~~ 305 (311)
T 1dcs_A 289 GETATFQDWIGGNYVNI 305 (311)
T ss_dssp SSEEEHHHHHCSSCCCE
T ss_pred CCCccHHHHHHHHHHHH
Confidence 9999999999888753
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=4.7e-68 Score=483.95 Aligned_cols=255 Identities=20% Similarity=0.261 Sum_probs=220.1
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCceee
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFEY 85 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY 85 (322)
++||||||+.. ..+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++... ...+||
T Consensus 2 ~~IPvIDls~~----------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY 69 (280)
T 3on7_A 2 MKLETIDYRAA----------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGF 69 (280)
T ss_dssp --CCEEETTST----------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEE
T ss_pred CCCCEEECCCh----------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCcc
Confidence 47999999863 25789999999999999999999999999999999999997 899998754 468999
Q ss_pred eecC-C-------CCCceeeeecCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044747 86 YGQY-T-------IIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFES 157 (322)
Q Consensus 86 ~~~~-~-------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~ 157 (322)
.+.+ . ..|++|.|.+. .||..+|+|| +++++|+++|.+|+.+||++|+++
T Consensus 70 ~~~~~~e~~~~~~~~D~kE~~~~~--------------p~~~~p~~fr--------~~~~~y~~~~~~l~~~ll~~la~~ 127 (280)
T 3on7_A 70 FPASISETAKGHTVKDIKEYYHVY--------------PWGRIPDSLR--------ANILAYYEKANTLASELLEWIETY 127 (280)
T ss_dssp ECCC--------CCCCSCEEEEEC--------------TTSCCCGGGH--------HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCccccccCCCCcccHHHHHhcC--------------CCCCCCHHHH--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8764 1 24677877652 3776678888 999999999999999999999999
Q ss_pred cCCC--Cc----chhhhcCcc-eeeecccccCCCCCC--CCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCC
Q 044747 158 YGVE--GY----YDSYIGSVN-YLLRYFKYRAPEPNE--TKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPS 228 (322)
Q Consensus 158 Lgl~--~~----~~~~~~~~~-~~lr~~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~ 228 (322)
||++ +. |.+.+..+. +.||++||||++.++ ..+|+++|||+|+||||+| |+++||||++++|+|++|+|+
T Consensus 128 Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~GLqV~~~~g~W~~V~p~ 206 (280)
T 3on7_A 128 SPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPT-ANEPGLQVKAKDGSWLDVPSD 206 (280)
T ss_dssp SCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEEC-CSCCCEEEECTTSCEEECCCC
T ss_pred cCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEe-cCCCCeEEEcCCCCEEECcCC
Confidence 9976 22 345555554 899999999998644 5789999999999999999 899999999899999999999
Q ss_pred CCeEEeEhhHHHHHHhCCCccCCCceeecCCC---CCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHH
Q 044747 229 PSSFIVMAGDALMAWGNDRIRPCRHQVIMDNA---SETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHF 303 (322)
Q Consensus 229 ~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~---~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~ 303 (322)
||++|||+||+||+||||+||||+|||+.|++ ..+|||++||++|+. +|.| ++|++||+++
T Consensus 207 pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~ 272 (280)
T 3on7_A 207 FGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLME 272 (280)
T ss_dssp TTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHH
T ss_pred CCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHH
Confidence 99999999999999999999999999999532 468999999999998 6653 5899999999
Q ss_pred HhhhccC
Q 044747 304 NQSEEGK 310 (322)
Q Consensus 304 ~~~~~g~ 310 (322)
|+++.|.
T Consensus 273 rl~~~~l 279 (280)
T 3on7_A 273 RLRELGV 279 (280)
T ss_dssp HHHHTTC
T ss_pred HHHHhcC
Confidence 9998764
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=94.09 E-value=0.71 Score=39.32 Aligned_cols=44 Identities=23% Similarity=0.239 Sum_probs=34.2
Q ss_pred CCeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc
Q 044747 220 GEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG 275 (322)
Q Consensus 220 g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~ 275 (322)
..++.|.|.+|.+||.-+. -.|+|..-.++.+|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3577899999999999773 3899987334579999999987753
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=93.58 E-value=0.077 Score=46.32 Aligned_cols=81 Identities=20% Similarity=0.169 Sum_probs=54.0
Q ss_pred ceeeecccccCCCCCCCCCccccccCCC-----------CceEEeeCCC-----CCceEEEcCCCCeEEcCCCCCeEEeE
Q 044747 172 NYLLRYFKYRAPEPNETKMGLTPHTDKT-----------MTSIIHQINH-----INGLQVQAKDGEWIDVEPSPSSFIVM 235 (322)
Q Consensus 172 ~~~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q~d~-----~~GLqv~~~~g~W~~V~p~~g~~vVn 235 (322)
..-+++++|.+-. -..+|.|.. .+|+++.-++ .|.|.+.+..+ =..|+|..|.+|+.
T Consensus 98 ~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-~~~V~P~~G~~v~F 170 (243)
T 3dkq_A 98 FYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-QQSIKLSAGSLVLY 170 (243)
T ss_dssp EEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-EEEECCCTTCEEEE
T ss_pred cccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-cEEEecCCCEEEEE
Confidence 3458888996532 246676653 4566654222 24466654433 36899999999997
Q ss_pred hhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccC
Q 044747 236 AGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSF 272 (322)
Q Consensus 236 vGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~ 272 (322)
-. .++|+|.. .....|+++..+++
T Consensus 171 ~s------------~~lH~v~p-V~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 171 PS------------SSLHQVTP-VLSGERTAAFMWLQ 194 (243)
T ss_dssp ET------------TSEEEECC-EEEECEEEEEEEEE
T ss_pred CC------------CCeEcCcc-ccccCEEEEEEehh
Confidence 53 37999876 55578999999885
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=89.09 E-value=1.2 Score=37.84 Aligned_cols=101 Identities=10% Similarity=0.087 Sum_probs=59.1
Q ss_pred HHHHHHHHcCCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCC-----------CceEEeeCC--CCCc-eE
Q 044747 150 VTRMLFESYGVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKT-----------MTSIIHQIN--HING-LQ 214 (322)
Q Consensus 150 ll~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q~d--~~~G-Lq 214 (322)
|.+.|+..+|++ .. .-.+++++|.+.. -..+|.|+. .+|+++.-+ ..|| +.
T Consensus 95 i~~Ri~~~~gl~~~~--------~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~ 160 (216)
T 3itq_A 95 IEKRISSIMNVPASH--------GEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETF 160 (216)
T ss_dssp HHHHHHHHHTSCGGG--------BCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEE
T ss_pred HHHHHHHhcCceecc--------ccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeE
Confidence 344444456776 32 2347788886532 245677753 367776522 2344 43
Q ss_pred EEcCCCCeEEcCCCCCeEEeEhhHHHHHHhCCC-ccCCCceeecCCCCCceEEEEeccC
Q 044747 215 VQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDR-IRPCRHQVIMDNASETRYSLGLFSF 272 (322)
Q Consensus 215 v~~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~-~ks~~HRVv~~~~~~~R~Si~~F~~ 272 (322)
+ ++. =+.|.|..|.+|+.-.- ..+|. -..++|+|.. .....|+++..+++
T Consensus 161 F--p~~-~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~P-V~~G~K~v~~~W~~ 211 (216)
T 3itq_A 161 F--PKL-NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAP-VTKGEKWIATQWVR 211 (216)
T ss_dssp E--TTT-TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECC-EEESCEEEEEEEEE
T ss_pred e--cCC-CCEEecCCCeEEEEecc----CCCCCCCCccccccce-eccccEEEEEeeEe
Confidence 3 332 37899999998886530 01111 1467999876 44568999988765
No 10
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=87.66 E-value=0.78 Score=39.93 Aligned_cols=187 Identities=16% Similarity=0.131 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCceeeeecCCCCCceeeeecCCCCCch
Q 044747 28 STCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRN 107 (322)
Q Consensus 28 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~~~d~~E~~~~~~~~~~~ 107 (322)
...+.|.+++.+.|++++.|- ++++.++.+.+.++..-+ .-.+. ....|=..... .+.+. . +
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~-----~g~~~--~a~i~~~~~~~----~~~iR--~-d--- 75 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHD-----TGKFT--DGQLVSQKSDS----SKDIR--G-D--- 75 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHH-----TTCSC--SCCEEECCSSS----TTCEE--C-C---
T ss_pred hhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhh-----cCCcc--ccccccccccc----ccccc--c-c---
Confidence 345678899999998876555 999999999988877421 00111 11111000000 00000 0 0
Q ss_pred hhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcchhhhcCcceeeecccccCCCCCC
Q 044747 108 ATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNE 187 (322)
Q Consensus 108 ~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~lr~~~Yp~~~~~~ 187 (322)
...|=+...... +.+..|.+.+.++... +...||+.. .. ...-+.+.+|++.
T Consensus 76 ------~i~wl~~~~~~~--------~~~~~l~~~i~~l~~~----ln~~lGl~~-i~-----~~~e~~~~~Y~~~---- 127 (247)
T 2hbt_A 76 ------KITWIEGKEPGC--------ETIGLLMSSMDDLIRH----CNGKLGSYK-IN-----GRTKAMVACYPGN---- 127 (247)
T ss_dssp ------EEEEECSCSTTC--------HHHHHHHHHHHHHHHH----TTTTSTTCC-EE-----EECCEEEEEECSS----
T ss_pred ------ceeeecccccch--------hHHHHHHHHHHHHHHH----HhhhcCccc-cc-----ccceEEEEEecCC----
Confidence 001211100112 4444455555544332 222233210 00 0123567788751
Q ss_pred CCCccccccCCC-----CceEEeeCCC-------CCceEEEcCCC-CeEEcCCCCCeEEeEhhHHHHHHhCCCccCCCce
Q 044747 188 TKMGLTPHTDKT-----MTSIIHQINH-------INGLQVQAKDG-EWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQ 254 (322)
Q Consensus 188 ~~~g~~~HtD~g-----~lTlL~q~d~-------~~GLqv~~~~g-~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HR 254 (322)
.-....|.|.. .+|+++.-++ .|.|+++..++ ....|.|..|.+|+.-.+ . -++|.
T Consensus 128 -G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~-------~---~~~H~ 196 (247)
T 2hbt_A 128 -GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD-------R---RNPHE 196 (247)
T ss_dssp -SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS-------T---TCCEE
T ss_pred -CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC-------C---Cceee
Confidence 12456777762 5777765222 34467765432 578999999999998642 1 26999
Q ss_pred eecCCCCCceEEEEeccCC
Q 044747 255 VIMDNASETRYSLGLFSFS 273 (322)
Q Consensus 255 Vv~~~~~~~R~Si~~F~~P 273 (322)
|.. ....|+||...++-
T Consensus 197 V~p--~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 197 VQP--AYATRYAITVWYFD 213 (247)
T ss_dssp ECC--BSSCEEEEEEEEEE
T ss_pred ecc--CCCEEEEEEEEEcC
Confidence 866 45799999886653
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=86.64 E-value=1.3 Score=37.65 Aligned_cols=47 Identities=9% Similarity=0.044 Sum_probs=33.5
Q ss_pred eEEcCCCCCeEEeEhhHHHHHHhCCCc-cCCCceeecCCCCCceEEEEeccCC
Q 044747 222 WIDVEPSPSSFIVMAGDALMAWGNDRI-RPCRHQVIMDNASETRYSLGLFSFS 273 (322)
Q Consensus 222 W~~V~p~~g~~vVnvGd~l~~~TnG~~-ks~~HRVv~~~~~~~R~Si~~F~~P 273 (322)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.. .....||++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~P-V~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCP-TLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECC-EEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCc-cccceEEEEEEeEEc
Confidence 4899999999888643 1123433 578999866 445689999988764
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=76.74 E-value=6.3 Score=33.84 Aligned_cols=83 Identities=20% Similarity=0.340 Sum_probs=52.6
Q ss_pred eeecccccCCCCCCCCCccccccCCC--------CceEEeeCCCCCceEEEcCC----------CCeEEcCCCCCeEEeE
Q 044747 174 LLRYFKYRAPEPNETKMGLTPHTDKT--------MTSIIHQINHINGLQVQAKD----------GEWIDVEPSPSSFIVM 235 (322)
Q Consensus 174 ~lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~q~d~~~GLqv~~~~----------g~W~~V~p~~g~~vVn 235 (322)
.+-+|+|.+- .-++++|.|-. +.||-+. ...=+.+..+. +..+.+.-.+|.++|.
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 4568889653 23788999852 2222222 11223332222 3688999999999999
Q ss_pred hhHHHHHHhCCCccCCCceeecC-CCCCceEEEEecc
Q 044747 236 AGDALMAWGNDRIRPCRHQVIMD-NASETRYSLGLFS 271 (322)
Q Consensus 236 vGd~l~~~TnG~~ks~~HRVv~~-~~~~~R~Si~~F~ 271 (322)
-|++=..|. |.|-.. .....|+|+.|=.
T Consensus 200 ~G~~r~~w~--------H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 200 EGATQADWQ--------HRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp EETHHHHEE--------EEECCCSSCCCCEEEEEEEC
T ss_pred ChhhhCccE--------ecCCCcCCCCCCEEEEEeee
Confidence 999988885 444330 1256899999865
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=70.94 E-value=5.5 Score=36.33 Aligned_cols=94 Identities=17% Similarity=0.200 Sum_probs=61.4
Q ss_pred eeecccccCCCCCCCCCccccccCCC------CceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEhhHHHHHHhCCC
Q 044747 174 LLRYFKYRAPEPNETKMGLTPHTDKT------MTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDR 247 (322)
Q Consensus 174 ~lr~~~Yp~~~~~~~~~g~~~HtD~g------~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~ 247 (322)
.+-++.|.+- -++++|.|-. +.|+-+- ...-+.+..++|.++.+.-.+|+++|.-|++-..|..|.
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I 270 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGI 270 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEE
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccC
Confidence 4567888652 2789999984 2233232 333455555667899999999999999999999997766
Q ss_pred ccCCCceeecC-----------------CCCCceEEEEeccCCCc
Q 044747 248 IRPCRHQVIMD-----------------NASETRYSLGLFSFSSG 275 (322)
Q Consensus 248 ~ks~~HRVv~~-----------------~~~~~R~Si~~F~~P~~ 275 (322)
-+-...-+-.. .....|+|+.|=.-+..
T Consensus 271 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 271 TCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred CcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 55433322100 01346999999865544
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=69.14 E-value=10 Score=31.62 Aligned_cols=81 Identities=14% Similarity=0.199 Sum_probs=51.1
Q ss_pred eecccccCCCCCCCCCccccccCCC--------CceEEeeCCCCCceEEEcC---------CCCeEEcCCCCCeEEeEhh
Q 044747 175 LRYFKYRAPEPNETKMGLTPHTDKT--------MTSIIHQINHINGLQVQAK---------DGEWIDVEPSPSSFIVMAG 237 (322)
Q Consensus 175 lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~q~d~~~GLqv~~~---------~g~W~~V~p~~g~~vVnvG 237 (322)
+-+|+|.+- .-+++.|.|-. +.+|-+. ...-+.+..+ .+..+.+.-.+|.++|.-|
T Consensus 102 ~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 102 VLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eEEEEECCC-----CCcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 458888653 23788999862 1122222 2222334322 1357888889999999999
Q ss_pred HHHHHHhCCCccCCCceeecCC-CCCceEEEEec
Q 044747 238 DALMAWGNDRIRPCRHQVIMDN-ASETRYSLGLF 270 (322)
Q Consensus 238 d~l~~~TnG~~ks~~HRVv~~~-~~~~R~Si~~F 270 (322)
++=..|. |.|-... ....|+|+.|-
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCCEEEEEee
Confidence 9888884 6664411 23689999884
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=64.75 E-value=7.3 Score=32.85 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=49.8
Q ss_pred eeecccccCCCCCCCCCccccccCC-----C--CceEEeeCCCCCceEEEc--CCCCeEEcCCCCCeEEeEhhHHHHHHh
Q 044747 174 LLRYFKYRAPEPNETKMGLTPHTDK-----T--MTSIIHQINHINGLQVQA--KDGEWIDVEPSPSSFIVMAGDALMAWG 244 (322)
Q Consensus 174 ~lr~~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~q~d~~~GLqv~~--~~g~W~~V~p~~g~~vVnvGd~l~~~T 244 (322)
.+-+|+|.+ +. ++++|.|- + ++|+-+- ...-+.+.. ..+..+.+.-.+|+++|.-|+.- .|
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~- 175 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF- 175 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC-
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce-
Confidence 356788854 23 89999993 2 2233332 222344432 23568889999999999988762 22
Q ss_pred CCCccCCCceeecCCC------CCceEEEEecc
Q 044747 245 NDRIRPCRHQVIMDNA------SETRYSLGLFS 271 (322)
Q Consensus 245 nG~~ks~~HRVv~~~~------~~~R~Si~~F~ 271 (322)
.|.|..-.. ...|+|+.|-.
T Consensus 176 -------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 577765211 24699999853
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=48.87 E-value=9.1 Score=36.10 Aligned_cols=54 Identities=19% Similarity=0.232 Sum_probs=40.5
Q ss_pred CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhC
Q 044747 6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFD 67 (322)
Q Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 67 (322)
..-||.||++.+ ..+. +.++..+.+++.|++.|.|. ||.+......+...+|.+
T Consensus 98 ~~~iP~i~f~di--~~~~-----~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADI--KAGH-----VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHH--HHTC-----CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHh--cCCC-----CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 457999999874 2221 23456678899999988887 899888888888888864
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=44.09 E-value=12 Score=34.54 Aligned_cols=52 Identities=8% Similarity=-0.026 Sum_probs=37.9
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDV 68 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~l 68 (322)
++|.||++.+ + .+ .+.+.++.+|+.++|++.+.|-.++.+.. .+.++.|=.+
T Consensus 122 ~~~~~~~~~~-l-~~----d~~~~~~~~~l~~~Gvv~frg~~~~~~~~---~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDV-L-RY----DEHAYKWLSTLKKVGIVRLTGASDKPGEV---SKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHH-H-HC----HHHHHHHHHHHHHHSEEEEECCCSSTTHH---HHHHHHHSCC
T ss_pred CCCccCHHHH-h-cC----HHHHHHHHHHHHhcCEEEEeCCCCCHHHH---HHHHHHhCCC
Confidence 6899999863 2 12 25678999999999999999998875443 3456666443
No 18
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=40.92 E-value=30 Score=19.47 Aligned_cols=18 Identities=17% Similarity=0.134 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHhccEEEE
Q 044747 28 STCKDVRHAFEEFGCFEA 45 (322)
Q Consensus 28 ~~~~~l~~A~~~~GFf~l 45 (322)
.+++.|.-.|.+-|||+-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 578899999999999983
No 19
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=40.10 E-value=16 Score=30.53 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=27.9
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++++... ++ .++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~----g~---~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP----GS---PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT----TC---HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 6899988642 22 257788999998888889999995
No 20
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=38.64 E-value=45 Score=29.85 Aligned_cols=41 Identities=17% Similarity=0.037 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhccEEEEEcCCCC----HHHHHHHHHHHHHhhC
Q 044747 27 LSTCKDVRHAFEEFGCFEAIYQKIS----QEFRSEVLASTEELFD 67 (322)
Q Consensus 27 ~~~~~~l~~A~~~~GFf~l~nhGi~----~~~~~~~~~~~~~fF~ 67 (322)
+++.+++.+.++.-||+.=.+|||+ .+-+..+.+++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 3455666777778888766789975 5789999999999985
No 21
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=33.64 E-value=22 Score=29.64 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=27.6
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++++... ++ .++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~----g~---~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF----GT---RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT----TC---HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 5888887642 22 257788999998888889999995
No 22
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=32.79 E-value=26 Score=29.78 Aligned_cols=37 Identities=14% Similarity=0.087 Sum_probs=28.2
Q ss_pred CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
..||++++... ++ .++++++.+++.+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~----g~---~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKP----GS---VELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCST----TC---HHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 36889988642 33 257788889998888899999995
No 23
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=32.30 E-value=41 Score=27.72 Aligned_cols=51 Identities=18% Similarity=0.086 Sum_probs=33.9
Q ss_pred CCCEE-EcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCC--H------HHHHHHHHHHHHh
Q 044747 8 KIPVI-DLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKIS--Q------EFRSEVLASTEEL 65 (322)
Q Consensus 8 ~iPvI-Dls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~--~------~~~~~~~~~~~~f 65 (322)
.||++ ++... ++ .++++.+.+++.+.-.+.|.|||+= . +-+++++..+..+
T Consensus 117 ~ip~~~~y~~~----g~---~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVS----AT---EEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCS----SS---HHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCC----Cc---HHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 68888 66542 22 2577888888888888999999941 2 4555555544433
No 24
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=32.06 E-value=40 Score=29.13 Aligned_cols=48 Identities=19% Similarity=0.182 Sum_probs=33.3
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHh
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEEL 65 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 65 (322)
+|+-|||+.. + + .+..++|.+++.++|++.+.|-.++.+... +.++.|
T Consensus 17 ei~gvdl~~~-l---~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~~~---~~~~~~ 64 (283)
T 1otj_A 17 QISGADLTRP-L---S---DNQFEQLYHAVLRHQVVFLRDQAITPQQQR---ALAQRF 64 (283)
T ss_dssp EEESCCSSSC-C---C---HHHHHHHHHHHHHHSEEEECSCCCCHHHHH---HHHHTT
T ss_pred EEECCCcCcc-C---C---HHHHHHHHHHHHHCCEEEECCCCCCHHHHH---HHHHHh
Confidence 3555677652 1 1 246789999999999999999888765443 355555
No 25
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=28.49 E-value=26 Score=28.98 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=25.0
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhcc---EEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFG---CFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~G---Ff~l~nhGi 50 (322)
.||+++... + ..++++.+.+++.+.+ .+.|.|||+
T Consensus 139 ~vp~~~~~~-----g---~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNEQ-----N---IPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCCS-----C---HHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCCC-----C---HHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 577766531 2 2467888888998765 788899995
No 26
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=27.00 E-value=27 Score=30.45 Aligned_cols=36 Identities=6% Similarity=0.139 Sum_probs=27.7
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCC
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKI 50 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 50 (322)
.||++++.. .++. ++++.+.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~----~g~~---ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMV----PGTD---AIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCC----SSSH---HHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCC----CCCH---HHHHHHHHHHccCCEEEEcCCCc
Confidence 588888754 2332 57788999998888899999995
No 27
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=26.30 E-value=80 Score=27.82 Aligned_cols=64 Identities=16% Similarity=0.125 Sum_probs=40.0
Q ss_pred ccccccCC--------CCceEEeeCCCCCceEEEcCCCCeEEcCCCCCe-EEeEhhHHHHHHhCCCccCCCceeecCCCC
Q 044747 191 GLTPHTDK--------TMTSIIHQINHINGLQVQAKDGEWIDVEPSPSS-FIVMAGDALMAWGNDRIRPCRHQVIMDNAS 261 (322)
Q Consensus 191 g~~~HtD~--------g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~-~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~ 261 (322)
.+.+|.|. +.+-+.......+|... .-+|+-+..+ +|. .++|. +..|.|.+ .+.
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f-~vdg~~~~m~--~GE~w~~d~-------------~~~H~v~N-~g~ 165 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFH-SNEDTVIHMR--PGEIWFLDA-------------ATVHSAVN-FSE 165 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEE-EETTEEECCC--TTEEEECCT-------------TSCEEEEE-SSS
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEE-EECCEEEecC--CCCEEEEcC-------------CCeeEEEc-CCC
Confidence 57899998 34555554334566555 2345333333 343 33332 35899999 888
Q ss_pred CceEEEEecc
Q 044747 262 ETRYSLGLFS 271 (322)
Q Consensus 262 ~~R~Si~~F~ 271 (322)
.+|+.+.+=+
T Consensus 166 ~~RIhLv~D~ 175 (290)
T 1e5r_A 166 ISRQSLCVDF 175 (290)
T ss_dssp SCCCEEEEEE
T ss_pred CCeEEEEEEe
Confidence 9999998766
No 28
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=25.72 E-value=59 Score=28.36 Aligned_cols=37 Identities=11% Similarity=-0.000 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhccEEEEEcCC-CCHHHHHHHHHHHHHhhC
Q 044747 28 STCKDVRHAFEEFGCFEAIYQK-ISQEFRSEVLASTEELFD 67 (322)
Q Consensus 28 ~~~~~l~~A~~~~GFf~l~nhG-i~~~~~~~~~~~~~~fF~ 67 (322)
+..++|.+++.++|++.+.|-. ++. ++..+.++.|=.
T Consensus 40 ~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 40 ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 4678999999999999999988 885 344455666543
No 29
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=22.33 E-value=1.8e+02 Score=23.27 Aligned_cols=40 Identities=10% Similarity=-0.029 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHHH
Q 044747 25 TWLSTCKDVRHAFEEFGCFEAIY-QKISQEFRSEVLASTEE 64 (322)
Q Consensus 25 ~~~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 64 (322)
.....+++|.+.+++...++|.+ +|++.+.+.++....++
T Consensus 7 ~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 7 QKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 35678899999999999888876 58998888888776664
No 30
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=21.58 E-value=1.9e+02 Score=23.05 Aligned_cols=39 Identities=8% Similarity=0.086 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhcc-EEEEEc-CCCCHHHHHHHHHHHHH
Q 044747 26 WLSTCKDVRHAFEEFG-CFEAIY-QKISQEFRSEVLASTEE 64 (322)
Q Consensus 26 ~~~~~~~l~~A~~~~G-Ff~l~n-hGi~~~~~~~~~~~~~~ 64 (322)
....+++|.+.+++.. .++|.+ +|++.+.+.++....++
T Consensus 6 K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 6 NVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678899999999998 776665 68998888777776653
No 31
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=21.47 E-value=15 Score=26.46 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=19.5
Q ss_pred cCCCCCeEEeEhhHHHHHHhCCCccCCCceeec
Q 044747 225 VEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIM 257 (322)
Q Consensus 225 V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRVv~ 257 (322)
||.....|.+.+- .-|||+|||++.-|+.
T Consensus 38 vpigesrftislr----ktsngrykstlklvvp 66 (131)
T 2vf9_A 38 VPIGESRFTISLR----KTSNGRYKSTLKLVVP 66 (131)
T ss_dssp SCSSCEEEEEEEE----ECTTSEEEEEEEEEEE
T ss_pred cccccceEEEEEE----ecCCCceeeeEEEEEE
Confidence 3333444555543 4599999999988765
No 32
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=21.10 E-value=69 Score=27.70 Aligned_cols=48 Identities=15% Similarity=0.186 Sum_probs=33.6
Q ss_pred CCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHh
Q 044747 8 KIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEEL 65 (322)
Q Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 65 (322)
+|.=|||+.. + + .+..++|.+|+.++|.+.+.|..++.+.. .+.++.|
T Consensus 15 ei~gvdl~~~-l---~---~~~~~~l~~~l~~~gvv~fR~q~l~~~~~---~~fa~~f 62 (277)
T 3pvj_A 15 QISGVDISRD-I---S---AEERDAIEQALLQHQVLFLRDQPINPEQQ---ARFAARF 62 (277)
T ss_dssp EEESCCTTSC-C---C---HHHHHHHHHHHHHHSEEEESSCCCCHHHH---HHHHGGG
T ss_pred EEeCCCcccc-C---C---HHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHh
Confidence 4555677652 2 1 24678999999999999999998886533 3455555
No 33
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=20.45 E-value=1.6e+02 Score=24.39 Aligned_cols=40 Identities=5% Similarity=0.024 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHHH
Q 044747 25 TWLSTCKDVRHAFEEFGCFEAIY-QKISQEFRSEVLASTEE 64 (322)
Q Consensus 25 ~~~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 64 (322)
.+...+++|.+.+.++..++|++ +|++.+.++++....++
T Consensus 4 ~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 4 WKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 34678889999999998777765 68998888887776653
No 34
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=20.29 E-value=98 Score=26.44 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=30.7
Q ss_pred HHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhC
Q 044747 30 CKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFD 67 (322)
Q Consensus 30 ~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 67 (322)
.+++.+.+.+.||+.|.|- ++.+.++++.+...++++
T Consensus 21 ~~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 21 RAALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 3568889999999998875 899999999988887753
Done!