BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044754
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1
Length = 273
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 117/170 (68%), Gaps = 1/170 (0%)
Query: 1 MARCCNSLFVVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIG 60
MARC N+L +LN + FLLS+ I+ G+ L +TEC++FL KPV+ LG F+M++++ G
Sbjct: 1 MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60
Query: 61 IRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSS 120
+ G+CC + LW YL ++ L+I+ V +TVF VTN+G+G+ GK YKEY++ DYS+
Sbjct: 61 LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120
Query: 121 WLRKRMNDEENWRKIKSCFVATNICSDFERRHVNAAAADKFSRERLSSVE 170
WL+KR+ + +NW KI+SC V + +CS E + VN + F +E L++++
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVN-VPVNSFYKEHLTALQ 169
>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1
Length = 263
Score = 152 bits (385), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 1 MARCCNSLFVVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIG 60
M +C N+L +LN TFLLS+ I+ G+ L ATEC++FL KP+++LG F+M +S+ G
Sbjct: 1 MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60
Query: 61 IRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSS 120
+ GACC S LW YL + L+I+ T+F AVTNRG+G+ + YKEY + DYS+
Sbjct: 61 LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 120
Query: 121 WLRKRMNDEENWRKIKSCFVATNICSDFERRHVNAAAADKFSRERLSSVE 170
WL+KR+N+ +NW +I+SC + +++CS + R+ + D F + L++++
Sbjct: 121 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVED-FYKSNLNALQ 169
>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1
Length = 272
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Query: 1 MARCCNSLFVVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIG 60
M R NSL +LN FLLSV I+ G+ L T+C++FL KP++ LG F+MII++ G
Sbjct: 1 MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60
Query: 61 IRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSS 120
+ G+CC + LWSYL ++ +I+ V+ T+F VT++GSG+ GKAYKEYR++ YS
Sbjct: 61 VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120
Query: 121 WLRKRMNDEENWRKIKSCFVATNICSDFERRHVNAAAADKFSRERLSSVE 170
WL++R+N+ ++W I+SC + C + E N +D F +E L++ E
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSD-FYKEDLTAFE 169
>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1
Length = 282
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 107/170 (62%), Gaps = 6/170 (3%)
Query: 1 MARCCNSLFVVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIG 60
M R N++ VLN++T L S+ I+ L +T C+ FLQ P+L++GF I+I+SL G
Sbjct: 1 MYRFSNTVIGVLNLLTLLASIPII-GTALYKARSSTTCENFLQTPLLVIGFIILIVSLAG 59
Query: 61 IRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSS 120
GAC + + LW YLV+++ +I ++ LT+F L VT++G G + PG+ YKEYR+ DY
Sbjct: 60 FIGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHP 119
Query: 121 WLRKRMNDEENWRKIKSCFVATNICSDFERRHVNAAAADKFSRERLSSVE 170
WLR+R+ D E W I+SC +++ C+ E + D F R+ ++SV+
Sbjct: 120 WLRERVRDPEYWNSIRSCILSSKTCTKIE----SWTTLDYFQRD-MTSVQ 164
>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1
Length = 284
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 95/148 (64%), Gaps = 3/148 (2%)
Query: 7 SLFVV--LNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGA 64
S FV+ +N++T LL+V ++ FGV + +T C + L PV+ LG FI +IS+IG GA
Sbjct: 6 STFVIRWVNLLTMLLAVAVIIFGVWM-STHNDGCRRSLTFPVIALGGFIFLISIIGFLGA 64
Query: 65 CCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSSWLRK 124
C S LW YL +L+++++ ++ TV VTN GSG +PG YKEY+++DYSSW K
Sbjct: 65 CKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLK 124
Query: 125 RMNDEENWRKIKSCFVATNICSDFERRH 152
++N+ NW ++KSC V + C +++
Sbjct: 125 QLNNTSNWIRLKSCLVKSEQCRKLSKKY 152
>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1
Length = 285
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
Query: 3 RCCNSLFVVLNVVTFLLSVFIVWFGVLLIT-TEATECDKFLQKPVLLLGFFIMIISLIGI 61
R N L ++N +TFLLS+ I+ G+ L + +T+C +FLQ P++++G IM++SL G
Sbjct: 2 RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61
Query: 62 RGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSSW 121
GAC + +W YLV+++LII +I +F AVT++GSG+ + Y +Y ++DYS W
Sbjct: 62 AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121
Query: 122 LRKRMNDEENWRKIKSCFVATNICSDFERRHVNAA-AADKFSRERLSSVE 170
L+ R++D+ W KI SC + C R AD F RLS VE
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVE 171
>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1
Length = 327
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 6 NSLFVVLNVVTFLLSVFIVWFGVLLIT-TEATECDKFLQKPVLLLGFFIMIISLIGIRGA 64
++L ++N TFLLS+ I+ G+ L + +T+C +FLQ P++++G IM+ISL GI GA
Sbjct: 5 SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64
Query: 65 CCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSSWLRK 124
C + +W YL + +I +I T+F VT++GSG+ + Y +Y ++DYS WL+
Sbjct: 65 CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124
Query: 125 RMNDEENWRKIKSCFVATNICSDFERRHVNAAA--ADKFSRERLSSVE 170
R+ D WR I SC + +C R +N A F LS VE
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIG-RDLNGVPETAHMFYFRNLSPVE 171
>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1
Length = 281
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
Query: 1 MARCCNSLFVVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIG 60
M R N++ LN++T + S+ ++ L + T C+ FLQKP+L+LG I+I+S+ G
Sbjct: 1 MNRMSNTVIGFLNILTLISSIVLL-GSALWMGRSKTTCEHFLQKPLLILGLAILILSVAG 59
Query: 61 IRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSS 120
+ GACC + LW YL ++ IIV ++ LT+F VT+ G G+ YKE++++ Y
Sbjct: 60 LVGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHP 119
Query: 121 WLRKRMNDEENWRKIKSCFVATNICS 146
WL+ R+ D W IK+C + + CS
Sbjct: 120 WLKTRVVDTNYWVTIKTCLLGSVTCS 145
>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1
Length = 271
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 1 MARCCNSLFVVLNVVTFLLSVFIVWFGVLLITTEA-TECDKFLQKPVLLLGFFIMIISLI 59
M R N + + N + L+ + + + + + T+C+ ++ P+L G + ++SL+
Sbjct: 1 MFRVSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLL 60
Query: 60 GIRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYS 119
G+ G+C + + SYL++L IV ++ ++F VTN+G+G+ G+ YKEYR D+S
Sbjct: 61 GVIGSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFS 120
Query: 120 SWLRKRMNDEENWRKIKSCFVATNICSDFERRHVNAAAADKFSRERLSSVE 170
+WL + + W I+SC N+C D V + AD F + LS ++
Sbjct: 121 TWLNGFVGGKR-WVGIRSCLAEANVCDDLSDGRV-SQIADAFYHKNLSPIQ 169
>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1
Length = 269
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 6 NSLFVVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGAC 65
N++ +N +T LLS+ ++ G+ L C K LQ PV++LG I+++ L G G
Sbjct: 5 NNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGFIGGF 64
Query: 66 CHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSSWLRKR 125
+ L YL+ ++++IV + L F VT RGSG P +AY EY + D+S WLR+R
Sbjct: 65 WRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGWLRRR 124
Query: 126 MNDEENWRKIKSCFVATNICSDFERRHVNAAAADKFSRERLSSVE 170
+ W +I++C T IC + +R+ A F L ++
Sbjct: 125 VQRSYKWERIRTCLSTTTICPELNQRY---TLAQDFFNAHLDPIQ 166
>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1
Length = 270
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
Query: 6 NSLFVVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGAC 65
N+L +LN++ L S+ I G+ L + EC L+ PV++LG I+++S G GA
Sbjct: 5 NNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGFIGAY 64
Query: 66 CHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSSWLRKR 125
+ L YL + ++I ++ + +F VT + PG+ YKEYR++ +S+WL++
Sbjct: 65 KYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNWLKEN 124
Query: 126 MNDEENWRKIKSCFVATNICSDFERRHVNAAAADK-FSRERLSSVE 170
+ D +NW ++++C TN+C + + AD+ FS +++ ++
Sbjct: 125 VVDSKNWGRLRACLADTNVCPKLNQEFI---TADQFFSSSKITPLQ 167
>sp|Q9SI56|TET13_ARATH Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1
Length = 278
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 6 NSLFVVLNVVTFLLSVFIVWF-GVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGA 64
N++F++ + + + + F WF V+ + EC++F+ P + + F ++ +SL G A
Sbjct: 24 NTIFLISSAIFLVTAAF--WFVAVMTLHYRTDECNRFVTTPGIFISFSLLAMSLTGFYAA 81
Query: 65 CCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSSWLRK 124
S + + L + V+S +F + + + + PG E+R +DYS W+ +
Sbjct: 82 YFKSDCLFRIHFFIFFLWMFVVVSKAIFVIFLHKETNPRLFPGTKIYEFRYEDYSGWVSR 141
Query: 125 RMNDEENWRKIKSCFVATNICSDFERRHVNAAAADKFSRERLSSVE 170
+ ++ W + + C V N+C+ + A +F + L+ ++
Sbjct: 142 LVIKDDEWYRTRRCLVKDNVCNRLNHK----MPASEFYQMNLTPIQ 183
>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1
Length = 264
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 1 MARCCNSLFVVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIG 60
M R N+ + N + L+ + + F V + ++C +F+Q P+++ + IS +G
Sbjct: 1 MLRLSNAAVITTNAILALIGLAALSFSVYVYVQGPSQCQRFVQNPLIVTAALLFFISSLG 60
Query: 61 IRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSS 120
+ A S + YL L L I+ ++ L+VF VTN +G+ G+ + DY +
Sbjct: 61 LIAALYGSHIIITLYLFFLFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQN 120
Query: 121 WLRKRMNDEENWRKIKSCFVATNICSDFERRHVNAAAADKFSRERLSSVE 170
W+ +NW I C + +C F R ++ F + LS+V+
Sbjct: 121 WIGNHFLRGKNWEGITKCLSDSRVCKRFGPRDID------FDSKHLSNVQ 164
>sp|Q7ZUB3|TSN31_DANRE Tetraspanin-31 OS=Danio rerio GN=tspan31 PE=2 SV=2
Length = 212
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 46 VLLLGFFIMIISLIGIRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKS 105
V+ +GFF+ +I+++G+ GA H L+ Y+V+L ++ + ++ LA+ N+G +K
Sbjct: 49 VIAVGFFLQLIAIVGLIGAVHHHQVMLFFYMVILFVVFLFQFGVSCSCLAM-NQGQQEKL 107
Query: 106 PGKAYKEYRMDDYSSWLRKRMN 127
++K D S L K+++
Sbjct: 108 LESSWKIMSNDTRIS-LEKKLD 128
>sp|O95857|TSN13_HUMAN Tetraspanin-13 OS=Homo sapiens GN=TSPAN13 PE=2 SV=1
Length = 204
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 52 FIMIISLIGIRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQ 103
F+ +I+L+G+ GA H L+ Y+++L+L+ + S++ LA+ GQ
Sbjct: 55 FLFLIALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNQEQQGQ 106
>sp|Q5FVL6|TSN13_RAT Tetraspanin-13 OS=Rattus norvegicus GN=Tspan13 PE=2 SV=1
Length = 204
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 52 FIMIISLIGIRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQ 103
F+ +I+L+G+ GA H L+ Y+++L+L+ + S++ LA+ GQ
Sbjct: 55 FLFLIALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNREQQGQ 106
>sp|Q9D8C2|TSN13_MOUSE Tetraspanin-13 OS=Mus musculus GN=Tspan13 PE=2 SV=1
Length = 204
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 52 FIMIISLIGIRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQ 103
F+ +I+L+G+ GA H L+ Y+++L+L+ + S++ LA+ GQ
Sbjct: 55 FLFLIALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNREQQGQ 106
>sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230 OS=Gallus gallus GN=TMEM230 PE=2 SV=1
Length = 120
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 10 VVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGACCHSS 69
+ L VV F++ F++ G LL+ ++ PVL++G + + +R A S
Sbjct: 46 IALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVLIIGILVFLPGFYHLRIAYYASK 105
Query: 70 GY 71
GY
Sbjct: 106 GY 107
>sp|P83120|MTH_DROSI G-protein coupled receptor Mth OS=Drosophila simulans GN=mth PE=3
SV=2
Length = 515
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 47 LLLGFFIMIISLIGIRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSP 106
L +G+ ++ L I + C +G L + V+ + + VISL ++ T RGS K+
Sbjct: 257 LFMGYLFLLFDLWQISISFCKPAGVLGYFFVMAAFLWLSVISLHLWN---TFRGSSHKA- 312
Query: 107 GKAYKEYRMDDYSSW 121
+ + E+R Y+++
Sbjct: 313 SRFFSEHRFLAYNTY 327
>sp|Q3ZBV0|TSN13_BOVIN Tetraspanin-13 OS=Bos taurus GN=TSPAN13 PE=2 SV=1
Length = 204
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 52 FIMIISLIGIRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQ 103
F+ +I+L+G+ GA H L+ Y+++L+L+ + S++ LA+ Q
Sbjct: 55 FLFLIALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNQEQQAQ 106
>sp|Q96A57|TM230_HUMAN Transmembrane protein 230 OS=Homo sapiens GN=TMEM230 PE=1 SV=1
Length = 120
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 10 VVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGACCHSS 69
+ L V FL+ F++ G LL++ ++ PVL++G + + +R A S
Sbjct: 46 IALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASK 105
Query: 70 GY 71
GY
Sbjct: 106 GY 107
>sp|Q5BJP5|TM230_RAT Transmembrane protein 230 OS=Rattus norvegicus GN=Tmem230 PE=2 SV=1
Length = 120
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 10 VVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGACCHSS 69
+ L V FL+ F++ G LL++ ++ PVL++G + + +R A S
Sbjct: 46 IALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASK 105
Query: 70 GY 71
GY
Sbjct: 106 GY 107
>sp|Q8CIB6|TM230_MOUSE Transmembrane protein 230 OS=Mus musculus GN=Tmem230 PE=1 SV=1
Length = 120
Score = 30.4 bits (67), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 10 VVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGACCHSS 69
+ L V FL+ F++ G LL++ ++ PVL++G + + +R A S
Sbjct: 46 IALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASK 105
Query: 70 GY 71
GY
Sbjct: 106 GY 107
>sp|O97148|MTH_DROME G-protein coupled receptor Mth OS=Drosophila melanogaster GN=mth
PE=1 SV=1
Length = 514
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 47 LLLGFFIMIISLIGIRGACCHSSGYLWSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSP 106
L +G+ +++ L I + C +G+L + V+ + VISL ++ T RGS K+
Sbjct: 257 LFMGYLFLLLDLWQISISFCKPAGFLGYFFVMAAFFWLSVISLHLWN---TFRGSSHKA- 312
Query: 107 GKAYKEYRMDDYSSW 121
+ E+R Y+++
Sbjct: 313 NRFLFEHRFLAYNTY 327
>sp|Q5E975|TM230_BOVIN Transmembrane protein 230 OS=Bos taurus GN=TMEM230 PE=2 SV=1
Length = 120
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 10 VVLNVVTFLLSVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGACCHSS 69
+ L V FL+ F++ G LL+ ++ PVL++G + + +R A S
Sbjct: 46 IALATVLFLIGAFLIIIGSLLLAGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASK 105
Query: 70 GY 71
GY
Sbjct: 106 GY 107
>sp|P46098|5HT3A_HUMAN 5-hydroxytryptamine receptor 3A OS=Homo sapiens GN=HTR3A PE=1 SV=1
Length = 478
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 16/166 (9%)
Query: 14 VVTFLL-SVFIVWFGVLLITTEATECDKFLQKPVLLLGFFIMIISLIGIRGACCHSSGYL 72
VV+ LL S+F++ ++ ++ K LLLG+ + +I + A + +
Sbjct: 246 VVSLLLPSIFLMVMDIVGFYLPPNSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLI 305
Query: 73 WSYLVLLMLIIVGVISLTVFTLAVTNRGSGQKSPGKAYKEYRMDDYSSWL--------RK 124
Y V+ M ++V ++ T+F + + ++ Q+ P A+ + + + +WL +
Sbjct: 306 GVYFVVCMALLVISLAETIFIVRLVHKQDLQQ-PVPAWLRHLVLERIAWLLCLREQSTSQ 364
Query: 125 RMNDEENWRKIKSCFVATNICS------DFERRHVNAAAADKFSRE 164
R K C N CS DFE+ + + RE
Sbjct: 365 RPPATSQATKTDDCSAMGNHCSHMGGPQDFEKSPRDRCSPPPPPRE 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,105,554
Number of Sequences: 539616
Number of extensions: 2070079
Number of successful extensions: 8168
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 8123
Number of HSP's gapped (non-prelim): 68
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)