Your job contains 1 sequence.
>044767
MRLKARNHLLALNWKLWYAQKGGYKQEIRYTSPNQKTFYSLRTACRSLIDEQCSQNLTLN
LNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNLRANLEEKSVM
VTPQTSQSSSDDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQEDDNARRAKPGRRRGK
EKRKGIANSMTSRDDQKKSAVKHTHVRISGKQERQKVLPRFSVCNPRAVVLSKLIENNVV
FPGAKVCYGGKKGRVPLAKGSITNGGIKCNCCNEVFTLTGFEVHAGSKNHRPAANIFLED
GRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHS
SCLGLKDIPYGDWFCPLCCCAICGDGKFKQRTLHSVDDDDGLVRTCDQCEHKFHTGCTRK
SKRELKVKSQNKWFCSDRCEHVFSSLHELIGKPFSISENNLNWRLLKSLESDHQDVSNPT
DGKFLKELQRKLHGAVEVMHECFEPAKEPLTGRDLIEDVIFNRRSELKHLNYVGFYTVVL
EKKRKIISAATVRVYEKVAEIPFVATMFKYRRNGMCRLLMAELEKQLIALGVERLVLPSA
PSVLNAWTTKFGFSKMTASERLNYLNYTFLDFQGTIMCQKFLMKTPSASPCLSQAA
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044767
(656 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 712 1.4e-69 1
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 651 1.6e-65 2
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 666 1.7e-64 1
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 514 6.2e-64 3
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 561 9.9e-56 2
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 489 9.6e-51 2
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 322 2.9e-39 2
UNIPROTKB|F1NBP6 - symbol:F1NBP6 "Uncharacterized protein... 182 3.5e-10 1
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 169 7.4e-09 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 169 1.1e-08 1
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 141 1.1e-08 1
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 169 1.6e-08 1
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 169 1.7e-08 1
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 169 1.9e-08 1
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 162 1.9e-08 1
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 162 3.1e-08 1
UNIPROTKB|H0YF52 - symbol:TRIM66 "Tripartite motif-contai... 153 4.5e-08 1
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 165 5.1e-08 1
UNIPROTKB|F1RGC2 - symbol:TRIM66 "Uncharacterized protein... 162 6.4e-08 1
MGI|MGI:2152406 - symbol:Trim66 "tripartite motif-contain... 162 6.4e-08 1
UNIPROTKB|F1MD96 - symbol:F1MD96 "Uncharacterized protein... 161 8.4e-08 1
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 162 1.1e-07 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 162 1.1e-07 1
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 162 1.1e-07 1
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 162 1.1e-07 1
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 162 1.1e-07 1
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 162 1.1e-07 1
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 162 1.2e-07 1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 162 1.2e-07 1
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 161 1.3e-07 1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 169 1.4e-07 2
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 146 1.5e-07 1
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 130 1.7e-07 1
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 169 2.4e-07 2
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 164 2.5e-07 2
UNIPROTKB|F1PT90 - symbol:TRIM66 "Uncharacterized protein... 156 3.2e-07 1
RGD|1595847 - symbol:Trim66 "tripartite motif-containing ... 155 3.9e-07 1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 169 4.2e-07 2
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 146 4.6e-07 1
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 149 5.1e-07 2
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 153 5.3e-07 2
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 149 5.4e-07 1
UNIPROTKB|O15016 - symbol:TRIM66 "Tripartite motif-contai... 153 5.9e-07 1
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 125 5.9e-07 1
UNIPROTKB|B5MCJ9 - symbol:TRIM66 "Tripartite motif-contai... 153 6.0e-07 1
ZFIN|ZDB-GENE-040724-145 - symbol:trim66 "tripartite moti... 156 6.1e-07 2
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 169 6.4e-07 2
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 148 6.4e-07 3
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 166 1.2e-06 2
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 166 1.2e-06 2
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 166 1.2e-06 2
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 166 1.2e-06 2
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 166 1.2e-06 2
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 166 1.2e-06 2
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 166 1.2e-06 2
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 166 1.2e-06 2
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 166 1.2e-06 2
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 146 1.4e-06 2
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 143 3.0e-06 2
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 163 3.1e-06 2
UNIPROTKB|D4A3R4 - symbol:Whsc1l1 "Protein Whsc1l1" speci... 149 3.8e-06 2
RGD|1308980 - symbol:Whsc1l1 "Wolf-Hirschhorn syndrome ca... 149 3.8e-06 2
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 159 4.2e-06 2
UNIPROTKB|F1NX04 - symbol:PHF12 "Uncharacterized protein"... 130 5.0e-06 2
UNIPROTKB|C9J9G2 - symbol:PHF12 "PHD finger protein 12" s... 130 5.3e-06 2
UNIPROTKB|F1SNJ6 - symbol:LOC100620590 "Uncharacterized p... 135 5.9e-06 1
UNIPROTKB|J9P6F3 - symbol:WHSC1L1 "Uncharacterized protei... 142 6.0e-06 2
TAIR|locus:2195945 - symbol:AT1G77250 "AT1G77250" species... 139 6.2e-06 1
MGI|MGI:1924057 - symbol:Phf12 "PHD finger protein 12" sp... 130 6.2e-06 2
UNIPROTKB|K7EJ43 - symbol:PHF12 "PHD finger protein 12" s... 130 6.5e-06 1
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha... 145 6.9e-06 1
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci... 145 6.9e-06 1
UNIPROTKB|D4AC30 - symbol:D4AC30 "Uncharacterized protein... 130 7.0e-06 2
RGD|1307748 - symbol:Nsd1 "nuclear receptor binding SET d... 146 7.2e-06 1
MGI|MGI:1276545 - symbol:Nsd1 "nuclear receptor-binding S... 146 7.8e-06 1
UNIPROTKB|E1B7A1 - symbol:PHF12 "Uncharacterized protein"... 130 7.9e-06 2
UNIPROTKB|E2QYC0 - symbol:PHF12 "Uncharacterized protein"... 130 7.9e-06 2
UNIPROTKB|F1SBF4 - symbol:ZMYND8 "Uncharacterized protein... 141 8.3e-06 1
UNIPROTKB|E2R8R1 - symbol:ZMYND8 "Uncharacterized protein... 142 8.4e-06 1
UNIPROTKB|Q2TAK2 - symbol:PHF12 "PHF12 protein" species:9... 130 8.5e-06 2
UNIPROTKB|B7ZM62 - symbol:ZMYND8 "ZMYND8 protein" species... 141 9.7e-06 1
UNIPROTKB|F1RNA4 - symbol:PHF12 "Uncharacterized protein"... 130 1.0e-05 2
UNIPROTKB|Q2HXV1 - symbol:ZMYND8 "RACK7 isoform l" specie... 141 1.1e-05 1
UNIPROTKB|Q2HXV3 - symbol:ZMYND8 "Protein kinase C-bindin... 141 1.1e-05 1
UNIPROTKB|O96028 - symbol:WHSC1 "Histone-lysine N-methylt... 148 1.1e-05 2
UNIPROTKB|J3KPU3 - symbol:ZMYND8 "Protein kinase C-bindin... 141 1.1e-05 1
ZFIN|ZDB-GENE-030131-2773 - symbol:trim33 "tripartite mot... 150 1.2e-05 2
UNIPROTKB|F1LM99 - symbol:F1LM99 "Uncharacterized protein... 130 1.3e-05 2
UNIPROTKB|Q96QT6 - symbol:PHF12 "PHD finger protein 12" s... 130 1.3e-05 2
UNIPROTKB|E9PTL0 - symbol:Zmynd8 "Protein Zmynd8" species... 140 1.3e-05 1
UNIPROTKB|H7C4X9 - symbol:ZMYND8 "Protein kinase C-bindin... 140 1.3e-05 1
UNIPROTKB|E1C6X8 - symbol:WHSC1L1 "Uncharacterized protei... 142 1.3e-05 3
UNIPROTKB|Q9ULU4 - symbol:ZMYND8 "Protein kinase C-bindin... 140 1.4e-05 1
UNIPROTKB|F1MY77 - symbol:ZMYND8 "Uncharacterized protein... 140 1.4e-05 1
UNIPROTKB|F1M0S9 - symbol:Zmynd8 "Protein Zmynd8" species... 140 1.5e-05 1
UNIPROTKB|F5H0X3 - symbol:ZMYND8 "Protein kinase C-bindin... 140 1.5e-05 1
UNIPROTKB|F1RZJ3 - symbol:WHSC1L1 "Uncharacterized protei... 139 1.7e-05 2
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 138 1.7e-05 2
FB|FBgn0023097 - symbol:bon "bonus" species:7227 "Drosoph... 144 1.9e-05 2
UNIPROTKB|F1S8S0 - symbol:WHSC1 "Uncharacterized protein"... 136 1.9e-05 2
WARNING: Descriptions of 69 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 712 (255.7 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 153/438 (34%), Positives = 238/438 (54%)
Query: 209 SGKQERQKVLPRFSVCNPRAVVLSKLIENNVVFPGAKVCYGGKKGRVPLAKGSITNGGIK 268
S K ++ + F+ + + +LS LIE+ VV KV Y ++G + +G IT GI
Sbjct: 499 SSKDKKNPAINGFNPYSGKRTLLSWLIESGVVQLRQKVQYMRRRGAKVMLEGWITREGIH 558
Query: 269 CNCCNEVFTLTGFEVHAGSKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNRMKS 328
C+CC+++ T++ FE+HAGSK+ +P NI+LE G SL+ C + A +++ +
Sbjct: 559 CDCCSKILTVSRFEIHAGSKSCQPFQNIYLESGASLLQCQVRAWNMQKDATNLALHQVDT 618
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLCCCAICGDGKF 388
+ D C +C DGG+LICCD CP YH +CLG++ +P GDW CP C C C D
Sbjct: 619 DGDDPND-DACGICGDGGDLICCDGCPSTYHQNCLGMQVLPSGDWHCPNCTCKFC-DA-- 674
Query: 389 KQRTLHSVDDDDGLVR--TCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSL 446
+ S D + +C CE ++H C +++ FC +C +F L
Sbjct: 675 ---AVASGGKDGNFISLLSCGMCERRYHQLCLNDEAHKVQSFGSASSFCGPKCLELFEKL 731
Query: 447 HELIGKPFSISENNLNWRLLKSLESDHQDVSNPTDGKFLKELQRKLHGAVEVMHECFEPA 506
+ +G I E +W L+ +++D D ++ + + E KL + +M ECF P
Sbjct: 732 QKYLGVKTEI-EGGYSWSLIHRVDTD-SDTNSQMSAQRI-ENNSKLAVGLAIMDECFLPI 788
Query: 507 KEPLTGRDLIEDVIFNRRSELKHLNYVGFYTVVLEKKRKIISAATVRVYE-KVAEIPFVA 565
+ +G DLI +V++N S +NY GFYT +LE+ +IISAA++R + ++AE+PF+
Sbjct: 789 VDRRSGVDLIRNVLYNCGSNFNRINYTGFYTAILERGDEIISAASLRFHGMQLAEMPFIG 848
Query: 566 TMFKYRRNGMCRLLMAELEKQLIALGVERLVLPSAPSVLNAWTTKFGFSKMTASERLNYL 625
T YRR GMCR L +E + +L VE+LV+P+ P L+AWT FGF+ + S R
Sbjct: 849 TRHIYRRQGMCRRLFDAIESAMRSLKVEKLVIPAIPDFLHAWTGNFGFTPLDDSVRKEMR 908
Query: 626 NYTFLDFQGTIMCQKFLM 643
+ L F G M QK L+
Sbjct: 909 SLNTLVFPGIDMLQKPLL 926
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 651 (234.2 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 146/430 (33%), Positives = 228/430 (53%)
Query: 227 RAVVLSKLIENNVVFPGAKV-CYGGKKGRVPLAKGSITNGGIKCNCCNEVFTLTGFEVHA 285
+ +L +I++ +V KV C KK + L +G IT GI+CNCC+EVF++ FEVHA
Sbjct: 542 KRTMLGWMIDSTIVPLNGKVQCMDCKKTDI-LLEGIITKEGIRCNCCDEVFSVLDFEVHA 600
Query: 286 GSKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDG 345
G ++P +++LE G SL+ CL ++ + + +KG + + S D C +C DG
Sbjct: 601 GGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHFVDFGSGDPND-DTCGICGDG 659
Query: 346 GELICCDHCPCMYHSSCLGLKDIPYGDWFCPLCCCAICGD---GKFKQRTLHSVDDDDGL 402
G+LICCD CP +H SCL +K P G W+C C C C K + TL S+
Sbjct: 660 GDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEKDEAAKHETSTLPSLSS---- 715
Query: 403 VRTCDQ-C-EHKFHT-----GCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELIGKPFS 455
R C++ C +H HT C + +S + FC C+ +F L IG
Sbjct: 716 CRLCEEKCSKHYPHTLADHQACINQDGTVPGERSTDS-FCGKYCQELFEELQLFIGVKHP 774
Query: 456 ISENNLNWRLLKSLESDHQDVSNPTDGKFLKELQRKLHGAVEVMHECFEPAKEPLTGRDL 515
+ E +W L+ E + K K+ A VM ECF P + +G +L
Sbjct: 775 LPEG-FSWSFLRRFELPSEVADCDISEKIA--YNAKMAVAFSVMDECFSPLVDHRSGVNL 831
Query: 516 IEDVIFNRRSELKHLNYVGFYTVVLEKKRKIISAATVRVY-EKVAEIPFVATMFKYRRNG 574
++++++N S L++ F T VLE+ +II+ A++R++ ++AE+PF+ T + YRR G
Sbjct: 832 LQNIVYNFGSNFHRLDFSSFLTAVLERGDEIIAVASIRIHGNQLAEMPFIGTRYMYRRQG 891
Query: 575 MCRLLMAELEKQLIALGVERLVLPSAPSVLNAWTTKFGFSKMTASERLNYLNYTFLDFQG 634
MCR LM +E L +L V++LV+P+ P +++ WT+ FGF+ + SE+ N L F G
Sbjct: 892 MCRRLMDGIESALGSLKVDKLVIPAVPELIDTWTSGFGFAPVNDSEKKTIKNLNLLVFPG 951
Query: 635 TIMCQKFLMK 644
M K L+K
Sbjct: 952 VDMLGKSLVK 961
Score = 52 (23.4 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 27/118 (22%), Positives = 49/118 (41%)
Query: 49 IDEQCSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQN--- 105
+ ++C ++L K ES+ D D G+EE R R +F SQ+
Sbjct: 103 VKQECVKSLVPEEIRGDDFRSEVKVESKD-DRSDDGKEEKVQRKRGRPRKFGMSSQSDDN 161
Query: 106 -LTHN--LRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAK-AEAESMDF 159
L N LR +L +K +V + + ++++ + E +A+ E +DF
Sbjct: 162 GLISNCKLRTSLGKKKELVGDDNVEKLVGGSCFNKEKAEVKLEHGEYAEDKEILGLDF 219
Score = 41 (19.5 bits), Expect = 2.2e-64, Sum P(2) = 2.2e-64
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 131 DDALHSRKRRKKNTEVNLHAKAEAESM 157
DD ++R K TE H++++++ M
Sbjct: 365 DDERMIGEQRSKQTEAGGHSRSKSKKM 391
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 666 (239.5 bits), Expect = 1.7e-64, P = 1.7e-64
Identities = 155/453 (34%), Positives = 231/453 (50%)
Query: 207 RISGKQERQKVLPRFSVCNPRAVVLSKLIENNVVFPGAKVCYGGKKGRVPLAKGSITNGG 266
R S E +S+ PR V LS LI V+ + + G +T G
Sbjct: 599 RSSSNVENHFFQGNWSILGPRTV-LSWLIATKVISRDEVIQLRDPDDDTVVKTGLVTKDG 657
Query: 267 IKCNCCNEVFTLTGFEVHAGSKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNRM 326
+ C CCN+ +L+ F+ HAG + P N+F+ G+ C S + A G R+
Sbjct: 658 VVCTCCNKTVSLSEFKNHAGFNQNCPCLNLFMGSGKPFASCQLEAWSAEYKARRNGW-RL 716
Query: 327 KSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLCCCAICGDG 386
+ S D C VC DGGELICCD+CP +H +CL ++ +P G W+C C C IC +
Sbjct: 717 EKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSCTCWICSE- 775
Query: 387 KFKQRTLHSVDDDDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSL 446
L S + + C QC HK+H C + + K+ + +FC CE V++ L
Sbjct: 776 ------LVSDNAERSQDFKCSQCAHKYHGTCLQGISKRRKLFPET-YFCGKNCEKVYNGL 828
Query: 447 HELIGKPFSISENNLNWRLLKSLESDHQDVSNPTDGKFLKELQRKLHGAVEVMHECFEPA 506
+G + + + L+W +LK + D V + E KL A+ +M E F
Sbjct: 829 SSRVGI-INPNADGLSWSILKCFQEDGM-VHSARRLALKAECNSKLAVALSIMEESFLSM 886
Query: 507 KEPLTGRDLIEDVIFNRRSELKHLNYVGFYTVVLEKKRKIISAATVRVYE-KVAEIPFVA 565
+P TG D+I V++N S L++ GFYTVV+EK +IS A++RV+ +AE+P VA
Sbjct: 887 VDPRTGIDMIPHVLYNWGSTFARLDFDGFYTVVVEKDDVMISVASIRVHGVTIAEMPLVA 946
Query: 566 TMFKYRRNGMCRLLMAELEKQLIALGVERLVLPSAPSVLNAWTTKFGFSKMTASERLNYL 625
T KYRR GMCR+L+A +E+ L++L VE+LV+ + PS++ WT FGF M ER
Sbjct: 947 TCSKYRRQGMCRILVAAIEEMLMSLKVEKLVVAALPSLVETWTEGFGFKPMDDEERDALK 1006
Query: 626 NYTFLDFQGTIMCQKFLMKT--PSASP--CLSQ 654
+ F GT + +K L ++ PS CLS+
Sbjct: 1007 RINLMVFPGTTLLKKTLYESTKPSTMKGVCLSK 1039
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 514 (186.0 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 106/242 (43%), Positives = 154/242 (63%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELIGKPFSI-SENNLNWR 464
C+QC+ +FH C K + + S WFCS +C VFS+L L+G ++ ++ +L W
Sbjct: 318 CEQCQRRFHLTCL---KEDSCIVSSRGWFCSSQCNRVFSALENLLGSKIAVGNDGDLVWT 374
Query: 465 LLKSLESDHQDVSNPTDGKFLKELQ-RKLHGAVEVMHECFEPAKEPLTGRDLIEDVIFNR 523
L+++ P +G+ + Q KL AVE++H+ FEP + +GRDL+E++I+ +
Sbjct: 375 LMRA----------PNEGEHYDDEQISKLESAVEILHQGFEPTNDVFSGRDLVEELIYRK 424
Query: 524 -RSELKHLNYVGFYTVVLEKKRKIISAATVRVYEKVAEIPFVATMFKYRRNGMCRLLMAE 582
R+ + GFYTV++E+K + I+ A VRV + V EIP VAT+ YRR+GMCR+LM E
Sbjct: 425 DRTGVGR----GFYTVLIERKNEPITVAAVRVDKDVVEIPLVATLSSYRRSGMCRVLMDE 480
Query: 583 LEKQLIALGVERLVLPSAPSVLNAWTTKFGFSKMTASERLNYLNYTFLDFQGTIMCQKFL 642
LEKQ+ +GV RLVLP+A V+ WT +FGFS M +SERL + + LDF GTIMC KFL
Sbjct: 481 LEKQMSQMGVCRLVLPAAKEVVTTWTERFGFSVMNSSERLELVKHGMLDFVGTIMCHKFL 540
Query: 643 MK 644
K
Sbjct: 541 QK 542
Score = 287 (106.1 bits), Expect = 4.0e-31, Sum P(3) = 4.0e-31
Identities = 54/142 (38%), Positives = 81/142 (57%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGD-WFCPLCCCAICGDGKFKQRTLHS 395
D+C VC GG+L+ CD CP +H +CLGL +P D WFCP CCC ICG ++ S
Sbjct: 257 DVCCVCHWGGDLLLCDGCPSAFHHACLGLSSLPEEDLWFCPCCCCDICG-------SMES 309
Query: 396 VDDDDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELIGKPFS 455
+ + C+QC+ +FH C K + + S WFCS +C VFS+L L+G +
Sbjct: 310 PANSK--LMACEQCQRRFHLTCL---KEDSCIVSSRGWFCSSQCNRVFSALENLLGSKIA 364
Query: 456 I-SENNLNWRLLKSL-ESDHQD 475
+ ++ +L W L+++ E +H D
Sbjct: 365 VGNDGDLVWTLMRAPNEGEHYD 386
Score = 122 (48.0 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 1 MRLKARNHLLALNWKLWYAQKGGYKQEIRYTSPNQKTFYSLRTACRSLIDEQCSQNLTL- 59
+ +K + HL AL W + Y K K+E RY SP K FYSL AC S +D+ Q L +
Sbjct: 40 LSIKVKRHLSALGWVISYYNKRN-KKEQRYKSPKGKWFYSLAKACMSCVDQDSQQQLQIV 98
Query: 60 ---NLNANPAVNLHAKAESE 76
+L+ P+ N+ +++ S+
Sbjct: 99 PKYDLSCLPS-NIASESSSD 117
Score = 46 (21.3 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 126 SQSSSDDALHSRKRRKKNTEV-NLHAKAEAESMD 158
S+SSSD + +K+ KK V +L K+ A D
Sbjct: 112 SESSSDVSNQKQKKSKKRGRVEDLDVKSTAPEKD 145
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 561 (202.5 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 141/446 (31%), Positives = 221/446 (49%)
Query: 227 RAVVLSKLIENNVVFPGAKV-CYGGKKGRVPLAKGSITNGGIKCNCCNEVFTLTGFEVHA 285
+ +L +I++ +V KV C KK + L +G IT GI+CNCC+EVF++ FEVHA
Sbjct: 542 KRTMLGWMIDSTIVPLNGKVQCMDCKKTDI-LLEGIITKEGIRCNCCDEVFSVLDFEVHA 600
Query: 286 GSKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDG 345
G ++P +++LE G SL+ CL ++ + + +KG + + S D C +C DG
Sbjct: 601 GGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHFVDFGSGDPND-DTCGICGDG 659
Query: 346 GELICCDHCPCMYHSSCLGLKDIPYGDWFCPLCCCAICGD---GKFKQRTLHSVDDDDGL 402
G+LICCD CP +H SCL +K P G W+C C C C K + TL S+
Sbjct: 660 GDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEKDEAAKHETSTLPSLSS---- 715
Query: 403 VRTCDQ-C-EHKFHT-----GCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELIGKPFS 455
R C++ C +H HT C + +S + FC C+ +F L IG
Sbjct: 716 CRLCEEKCSKHYPHTLADHQACINQDGTVPGERSTDS-FCGKYCQELFEELQLFIGVKHP 774
Query: 456 ISENNLNWRLLKSLESDHQDVSNPTDGKFLKELQRKLHGAVEVMHECFEPAKEPLTGRDL 515
+ E +W L+ E + K K+ A VM ECF P + +G +L
Sbjct: 775 LPEG-FSWSFLRRFELPSEVADCDISEKIA--YNAKMAVAFSVMDECFSPLVDHRSGVNL 831
Query: 516 IEDVIFNRRSELKHLNYVGFYTVVLEKKRKIISAATVRVY-EKVAEIPFVATMFKYRRNG 574
++++++N S L++ F T VLE+ +II+ A++R++ ++AE+PF+ T + YRR G
Sbjct: 832 LQNIVYNFGSNFHRLDFSSFLTAVLERGDEIIAVASIRIHGNQLAEMPFIGTRYMYRRQG 891
Query: 575 MCRLLMAELEKQLIALGVERLVLPSAPSVLNAWT----------------TKFGFSKMTA 618
MCR LM +E +A ++ L + +L+ W + FGF+ +
Sbjct: 892 MCRRLMDGIES-FVAY-FSQMFLAISEVLLDVWQFCCYPACFGDGPFCFFSGFGFAPVND 949
Query: 619 SERLNYLNYTFLDFQGTIMCQKFLMK 644
SE+ N L F G M K L+K
Sbjct: 950 SEKKTIKNLNLLVFPGVDMLGKSLVK 975
Score = 52 (23.4 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 27/118 (22%), Positives = 49/118 (41%)
Query: 49 IDEQCSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQN--- 105
+ ++C ++L K ES+ D D G+EE R R +F SQ+
Sbjct: 103 VKQECVKSLVPEEIRGDDFRSEVKVESKD-DRSDDGKEEKVQRKRGRPRKFGMSSQSDDN 161
Query: 106 -LTHN--LRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAK-AEAESMDF 159
L N LR +L +K +V + + ++++ + E +A+ E +DF
Sbjct: 162 GLISNCKLRTSLGKKKELVGDDNVEKLVGGSCFNKEKAEVKLEHGEYAEDKEILGLDF 219
Score = 41 (19.5 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 131 DDALHSRKRRKKNTEVNLHAKAEAESM 157
DD ++R K TE H++++++ M
Sbjct: 365 DDERMIGEQRSKQTEAGGHSRSKSKKM 391
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 489 (177.2 bits), Expect = 9.6e-51, Sum P(2) = 9.6e-51
Identities = 117/272 (43%), Positives = 167/272 (61%)
Query: 393 LHSVDDDDGLVRTC--DQCEHKF--HTGCTRKSKRELKVKS-QNKWFCSD-RCEHVFSSL 446
L V D D ++C C F T K ++ + K + K+ S R + SL
Sbjct: 723 LEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSL 782
Query: 447 HELIGKPFSISENNLNWRLLKSLESD-HQDVSNPTDGKFLKELQRKLHGAVEVMHECFEP 505
+++G+ + S++ +SLE + + D ++ + E L A++VMHE FEP
Sbjct: 783 DKILGEKWFCSKD-----CEESLEPNMYGDDASKIEAA--AENHCILSVALDVMHELFEP 835
Query: 506 AKEPLTGRDLIEDVIFNRRSELKHLNYVGFYTVVLEKKRKIISAATVRVY-EKVAEIPFV 564
K P GRDL EDVIF+R S+ K LN+ GFYTV+LE+ +++S ATVR+ +KVAE+PF+
Sbjct: 836 VKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFI 895
Query: 565 ATMFKYRRNGMCRLLMAELEKQLIALGVERLVLPSAPSVLNAWTTKFGFSKMTASERLNY 624
T F++R+ GMCR+L+ ELEK LI LGVERLVLP+ P VLN W FGF+KMT SER N+
Sbjct: 896 GTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNF 955
Query: 625 LNYTFLDFQGTIMCQKFLMKTPSASPCLSQAA 656
L +T L+F TI+C+K L+K+ A P S A+
Sbjct: 956 LKFTLLEFGRTILCEKILIKSGVADPIPSIAS 987
Score = 446 (162.1 bits), Expect = 4.0e-43, Sum P(2) = 4.0e-43
Identities = 95/239 (39%), Positives = 130/239 (54%)
Query: 204 THVRISGKQERQKVLPRFSVCNPRAVVLSKLIENNVVFPGAKVCYGGKKGRVPLAKGSIT 263
T V S K+ ++ + P +PR + LS L++NNVV P + +K +G +T
Sbjct: 565 TRVLRSRKRAQRVITPISRKHSPRNI-LSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLT 623
Query: 264 NGGIKCNCCNEVFTLTGFEVHAGSKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGS 323
GIKC+CC VFT+ GFEVHA + AANIFL+DGRSL++C A +
Sbjct: 624 REGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKA--QPP 681
Query: 324 NRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLCCCAIC 383
+ +K Q E C VC GG+LI CD CP +H++CLGL+D+P GDWFC CCC C
Sbjct: 682 DMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGAC 741
Query: 384 GDGKFKQRTLHSVDDDDGLVRTCDQCEHKFHTGCTRKSKR--ELKVKSQNKWFCSDRCE 440
G +F +T + ++ + +C QCE K+H C R L KWFCS CE
Sbjct: 742 G--QFFLKTTSTNAKEEKFI-SCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCE 797
Score = 76 (31.8 bits), Expect = 9.6e-51, Sum P(2) = 9.6e-51
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 1 MRLKARNHLLALNWKLWYAQKGGYKQEIRYTSPNQKTF-YSLRTACRSLIDEQCSQNLTL 59
M + R HL + W + + +Q RY SPN + +SLR C L +Q ++LT
Sbjct: 365 MAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRL--KQPDKSLTT 422
Query: 60 NLNANP 65
ANP
Sbjct: 423 PGMANP 428
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 322 (118.4 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 79/247 (31%), Positives = 130/247 (52%)
Query: 406 CDQCEHKFHTGC-TRKSKRELKVKSQNKWFCSDRCEHVFSSLHELI-GKPFSISENNLNW 463
CDQCE ++H GC + ++ +LK + WFCS C + S+L +L+ G +S+++L
Sbjct: 727 CDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAEKLSDSSLGI 786
Query: 464 RLLKSLESDHQDVSNPT------DGKFLK-ELQRKLHGAVEVMHECFEPAKEPLTGRDLI 516
K +D +S+ GK E + L A+ + H+CF+P +PL+G +LI
Sbjct: 787 IQTKQERNDVYSISDLDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVDPLSGSNLI 846
Query: 517 EDVIFNRRSELKHLNYVGFYTVVLEKKRKIISAATVRVY-EKVAEIPFVATMFKYRRNGM 575
+++ + ++ +Y G VL ++SA +RV+ +VAE+P VAT R G
Sbjct: 847 PRMVYGKT--MQGQDYGGICCAVLTVNATVVSAGLLRVFGREVAELPLVATRMCSREKGY 904
Query: 576 CRLLMAELEKQLIALGVERLVLPSAPSVLNAWTTKFGFSKMTASERLNYLN--YTFLDFQ 633
+LL + +EK L +L VE +V+P+A W KFGF K+ + Y+ Y + F+
Sbjct: 905 FQLLFSCIEKLLSSLNVESIVVPAAEEAEPLWMNKFGFRKLAPEQLSKYIKICYQMVRFK 964
Query: 634 GTIMCQK 640
G M QK
Sbjct: 965 GASMLQK 971
Score = 180 (68.4 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 231 LSKLIENNVVFP-GAKVCYGGKKGRVPLAKGSITNGGIKCNCCNEVFTLTGFEVHAG-SK 288
L KL+ + P G ++ Y + G+ L G GI C CC + + FE HAG +
Sbjct: 523 LHKLVFDRGGLPEGTELGYYAR-GQ-KLLGGYKMGAGIYCYCCKCEVSPSLFEAHAGWAS 580
Query: 289 NHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGEL 348
+P I+ +G SL H +T + +N + D+CV+C DGG L
Sbjct: 581 RRKPYFYIYTSNGVSL-----HEWATT----FSHGRKYSANDNN----DLCVICADGGNL 627
Query: 349 ICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
+ CD CP +H C+ L IP G+W C C
Sbjct: 628 LLCDSCPRAFHIECVSLPSIPRGNWHCKYC 657
Score = 104 (41.7 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 227 RAVVLSKLIENNVVFPGAKVCYGG--KKGRVPLAKGSITNGGIKCNC--CN--EVFTLTG 280
R + L E ++ G V Y G K PL +G I +GGI C+C C+ V + +
Sbjct: 260 RPETVRDLFETGLL-DGLSVVYMGTVKSQAFPL-RGIIRDGGILCSCSSCDWANVISTSK 317
Query: 281 FEVHAGSKNHRPAANIFLEDGRSLVDCL 308
FE+HA + R + I E+G+SL+D L
Sbjct: 318 FEIHACKQYRRASQYICFENGKSLLDVL 345
Score = 42 (19.8 bits), Expect = 8.5e-25, Sum P(2) = 8.5e-25
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 251 KKGRVPLAKGSITNGGIKCNCCNEVFT 277
K+ + P S+ + G C C+EV T
Sbjct: 376 KRCKGPFPFSSLGHRGFLCKSCSEVET 402
Score = 38 (18.4 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 317 TAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHC 354
T ++ G + + + + + + + + DGG L C C
Sbjct: 270 TGLLDGLSVVYMGTVKSQAFPLRGIIRDGGILCSCSSC 307
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 182 (69.1 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 273 NEVFTLTGFEVHAGSKNHRPAANIFL-EDGRSLVDCLRHMVST---DNTAIVKGSNRMKS 328
N + + + F V+ N + N + G SL++ +V + + +++ SN +
Sbjct: 716 NLISSKSSFHVNLIPANSKSQWNYSCKQSGLSLLESSLQVVGSVCHSSASLLPDSNNCEK 775
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
+ +E D C VCL+GGEL+CCDHCP ++H SC L P G+W C LC
Sbjct: 776 EVNTIENEDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLC 827
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 169 (64.5 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 325 RMKSNSHQVETYD--MCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
R K+N+ + + D C VC DGG+L+CCD CP +YH +CL LK IP GDW CP C
Sbjct: 22 RPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 169 (64.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C GK QR LH
Sbjct: 417 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL-KGKV-QRILH 474
Score = 130 (50.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L+ P G W CP C
Sbjct: 336 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 55 (24.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 424 DGGELLCCDACPSSYHLHCLNPPLPEIP---NGEWLCP-RC 460
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 141 (54.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 328 SNSHQVETYDM-CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAIC 383
+N Q D C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C
Sbjct: 54 NNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAEC 113
Query: 384 GDGKFKQRTLHSVD 397
+ + K T+ +++
Sbjct: 114 IETQSKAMTMLTIE 127
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 169 (64.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C GK QR LH
Sbjct: 333 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL-KGKV-QRILH 390
Score = 130 (50.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L+ P G W CP C
Sbjct: 252 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 303
Score = 55 (24.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 340 DGGELLCCDACPSSYHLHCLNPPLPEIP---NGEWLCP-RC 376
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 169 (64.5 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C GK QR LH
Sbjct: 349 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL-KGKV-QRILH 406
Score = 130 (50.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L+ P G W CP C
Sbjct: 268 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 319
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 356 DGGELLCCDACPSSYHLHCLNPPLPEIP---NGEWLCP-RC 392
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 169 (64.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C GK QR LH
Sbjct: 417 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL-KGKV-QRILH 474
Score = 130 (50.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L+ P G W CP C
Sbjct: 336 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 424 DGGELLCCDACPSSYHLHCLNPPLPEIP---NGEWLCP-RC 460
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 328 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 385
Score = 127 (49.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L P G W CP C
Sbjct: 243 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 294
Score = 50 (22.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C ++ +W C RC
Sbjct: 335 DGGELLCCDACISSYHIHCLNPPLPDIP---NGEWLCP-RC 371
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 162 (62.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 470 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 527
Score = 127 (49.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L P G W CP C
Sbjct: 386 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 437
Score = 50 (22.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C ++ +W C RC
Sbjct: 477 DGGELLCCDACISSYHIHCLNPPLPDIP---NGEWLCP-RC 513
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 333 VETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
+E D C VCL+GGEL+CCD CP ++H SC L P G+W C LC
Sbjct: 99 IENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 146
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 165 (63.1 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 43/118 (36%), Positives = 56/118 (47%)
Query: 327 KSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICG 384
+ + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C C
Sbjct: 424 EEDDHHME---FCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSM- 479
Query: 385 DGKFKQ-RTLHSVDDDDG--LVRTCD-QCEHKFHTGCTRKSKRELKVKSQNK--WFCS 436
GK ++ T + + R D + T + +RE VK QN W CS
Sbjct: 480 KGKVQKILTWRWTEPPPPTPVPRPSDLPTDAPDPTPLAGRPEREFFVKWQNMSYWHCS 537
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL ++ P G W CP C
Sbjct: 346 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHC 397
>UNIPROTKB|F1RGC2 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:FP102759 Ensembl:ENSSSCT00000015917 Uniprot:F1RGC2
Length = 1238
Score = 162 (62.1 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 28/48 (58%), Positives = 31/48 (64%)
Query: 333 VETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
VE D C VCL+GGEL+CCD CP +YH SC L P GDW C LC
Sbjct: 989 VENEDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLC 1036
>MGI|MGI:2152406 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00502 MGI:MGI:2152406 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0010369
EMBL:AJ307670 GeneTree:ENSGT00530000062982 CTD:9866
HOGENOM:HOG000074104 HOVERGEN:HBG057849 KO:K12032 EMBL:AY572455
EMBL:AC124457 IPI:IPI00776191 IPI:IPI00853877 RefSeq:NP_862901.3
UniGene:Mm.183528 ProteinModelPortal:Q924W6 SMR:Q924W6
STRING:Q924W6 PhosphoSite:Q924W6 PRIDE:Q924W6
Ensembl:ENSMUST00000033339 GeneID:330627 KEGG:mmu:330627
InParanoid:Q924W6 NextBio:399482 Bgee:Q924W6 CleanEx:MM_TRIM66
Genevestigator:Q924W6 Uniprot:Q924W6
Length = 1242
Score = 162 (62.1 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 313 STDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPY 370
S ++ I + K+ +E D C VC++GGEL+CCD CP +YH SC L P
Sbjct: 973 SEEHRLIPRAPGAKKNTPAPIENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPG 1032
Query: 371 GDWFCPLC 378
G+W C LC
Sbjct: 1033 GEWVCTLC 1040
>UNIPROTKB|F1MD96 [details] [associations]
symbol:F1MD96 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:DAAA02040745
EMBL:DAAA02040746 IPI:IPI01003121 Ensembl:ENSBTAT00000027831
Uniprot:F1MD96
Length = 1268
Score = 161 (61.7 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 27/48 (56%), Positives = 31/48 (64%)
Query: 333 VETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
+E D C VCL+GGEL+CCD CP +YH SC L P GDW C LC
Sbjct: 1019 IENEDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLC 1066
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 162 (62.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 413 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 470
Score = 127 (49.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L P G W CP C
Sbjct: 329 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 380
Score = 50 (22.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C ++ +W C RC
Sbjct: 420 DGGELLCCDACISSYHIHCLNPPLPDIP---NGEWLCP-RC 456
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 162 (62.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 453 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 510
Score = 127 (49.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L P G W CP C
Sbjct: 368 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 419
Score = 50 (22.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C ++ +W C RC
Sbjct: 460 DGGELLCCDACISSYHIHCLNPPLPDIP---NGEWLCP-RC 496
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 162 (62.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 455 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 512
Score = 127 (49.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L P G W CP C
Sbjct: 371 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 422
Score = 50 (22.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C ++ +W C RC
Sbjct: 462 DGGELLCCDACISSYHIHCLNPPLPDIP---NGEWLCP-RC 498
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 162 (62.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 457 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 514
Score = 127 (49.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L P G W CP C
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 50 (22.7 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C ++ +W C RC
Sbjct: 464 DGGELLCCDACISSYHIHCLNPPLPDIP---NGEWLCP-RC 500
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 162 (62.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 457 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 514
Score = 127 (49.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L P G W CP C
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 50 (22.7 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C ++ +W C RC
Sbjct: 464 DGGELLCCDACISSYHIHCLNPPLPDIP---NGEWLCP-RC 500
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 162 (62.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 508 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 565
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 162 (62.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 508 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 565
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 162 (62.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD C YH CL L DIP G+W CP C C + G+ Q+ LH
Sbjct: 516 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVL-KGRV-QKILH 573
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 161 (61.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/61 (52%), Positives = 36/61 (59%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFK-QRTL 393
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C K K QR L
Sbjct: 346 EFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTPQ-CPPLKGKVQRIL 404
Query: 394 H 394
H
Sbjct: 405 H 405
Score = 131 (51.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 327 KSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ + ++ + D C VC GGE+I CD CP YH CL L+ P G W CP C
Sbjct: 264 EGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 317
Score = 55 (24.4 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 353 DGGELLCCDTCPSSYHLHCLNPPLPEIP---NGEWLCP-RC 389
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 169 (64.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C GK QR LH
Sbjct: 415 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL-KGKV-QRILH 472
Score = 130 (50.8 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L+ P G W CP C
Sbjct: 334 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 385
Score = 55 (24.4 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 422 DGGELLCCDACPSSYHLHCLNPPLPEIP---NGEWLCP-RC 458
Score = 44 (20.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 101 EGSQN-LTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKAEAESMDF 159
EGS + L+ N +LEEKS +S D ++K++KK E KA+ + D
Sbjct: 68 EGSNDELSEN-EEDLEEKS--------ESEGSDYSPTKKKKKKLKEKK-EKKAKRKKRDE 117
Query: 160 GNLGQED 166
ED
Sbjct: 118 DEEDNED 124
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 146 (56.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 25/44 (56%), Positives = 29/44 (65%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC DGGELICCD CP +H +CL L++IP G W C C
Sbjct: 90 DECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 130 (50.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 169 (64.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C GK QR LH
Sbjct: 391 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL-KGKV-QRILH 448
Score = 133 (51.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 313 STDNTAIVKGSNRMKS-------NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG- 364
S +TA+ K S R + + ++ + D C VC GGE+I CD CP YH CL
Sbjct: 287 SEGSTALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDP 346
Query: 365 -LKDIPYGDWFCPLC 378
L+ P G W CP C
Sbjct: 347 ELEKAPEGKWSCPHC 361
Score = 55 (24.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 398 DGGELLCCDACPSSYHLHCLNPPLPEIP---NGEWLCP-RC 434
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 112 ANLEEKSVMVTPQTSQSSSDDALHSRKRRKK 142
++L+ S+ + S+ S+ S++RRKK
Sbjct: 273 SDLDSASIHSSSVRSEGSTALGKKSKRRRKK 303
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 164 (62.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 28/49 (57%), Positives = 31/49 (63%)
Query: 334 ETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCC 380
E + C VC DGGEL+CCD CP YH+ CL L IP GDW CP C C
Sbjct: 435 EHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSC 483
Score = 47 (21.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 196 QKKSAVKHTHVRISGKQERQKVLPRFSVCN 225
++K A K SG + V FSVCN
Sbjct: 106 EEKQAAKEKESASSGMPSVEDVCSAFSVCN 135
>UNIPROTKB|F1PT90 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:AAEX03012891
Ensembl:ENSCAFT00000011106 Uniprot:F1PT90
Length = 1374
Score = 156 (60.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 333 VETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
+E D C VCL+GGEL+CCD CP ++H SC L P GDW C LC
Sbjct: 1125 IENEDFCAVCLNGGELLCCDRCPKVFHLSCHLPALLGFPGGDWVCTLC 1172
>RGD|1595847 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=ISO] [GO:0016235
"aggresome" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 RGD:1595847 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0010369 GeneTree:ENSGT00530000062982 IPI:IPI00366002
PRIDE:F1M6Z0 Ensembl:ENSRNOT00000019368 UCSC:RGD:1595847
NextBio:676966 ArrayExpress:F1M6Z0 Uniprot:F1M6Z0
Length = 1307
Score = 155 (59.6 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 333 VETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
+E D C VC++GGEL+CCD CP +YH SC L P G+W C LC
Sbjct: 1058 IENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLC 1105
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 169 (64.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C GK QR LH
Sbjct: 362 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL-KGKV-QRILH 419
Score = 130 (50.8 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L+ P G W CP C
Sbjct: 281 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 332
Score = 55 (24.4 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 369 DGGELLCCDACPSSYHLHCLNPPLPEIP---NGEWLCP-RC 405
Score = 39 (18.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 19/89 (21%), Positives = 38/89 (42%)
Query: 80 FGDLGQEENHARHAKRACRFDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKR 139
FG +G + + +E + ++ + S+ + S+ S+ S++R
Sbjct: 208 FGGVGSKRKKGSSVSASVSSEEDERE-----ESDFDSASIHSSSMRSECSAALGKKSKRR 262
Query: 140 RKKNTEVNLHAKAEAESMDFGNLGQEDDN 168
RKK N + A + +D G+ G E D+
Sbjct: 263 RKKKR--NQGSPAHSP-VDDGD-GYETDH 287
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 146 (56.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 25/44 (56%), Positives = 29/44 (65%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC DGGELICCD CP +H +CL L++IP G W C C
Sbjct: 90 DECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 149 (57.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 27/49 (55%), Positives = 30/49 (61%)
Query: 332 QVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
Q + D C VC DGGELICCD CP +H +CL L DIP G W C C
Sbjct: 292 QQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSC 340
Score = 46 (21.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 376 PLCCCAICGDGKFKQRTLH 394
P C +CGDG R H
Sbjct: 428 PAARCGVCGDGSDVLRCTH 446
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 153 (58.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 28/50 (56%), Positives = 32/50 (64%)
Query: 331 HQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
HQ + D C VC DGGELICCD CP +H +CL L+DIP G W C C
Sbjct: 300 HQ-KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSC 348
Score = 42 (19.8 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 380 CAICGDGKFKQRTLH 394
C +CGDG R H
Sbjct: 442 CGVCGDGADVLRCAH 456
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 149 (57.5 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 331 HQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
HQ + D C VC DGGELICCD CP +H +CL L++IP G W C C
Sbjct: 292 HQ-KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>UNIPROTKB|O15016 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 EMBL:AJ400879 EMBL:AC091053
EMBL:AB002296 EMBL:AC104360 IPI:IPI00004420 IPI:IPI00941834
RefSeq:NP_055633.1 UniGene:Hs.130836 ProteinModelPortal:O15016
SMR:O15016 STRING:O15016 PhosphoSite:O15016 PaxDb:O15016
PRIDE:O15016 Ensembl:ENST00000299550 GeneID:9866 KEGG:hsa:9866
UCSC:uc010rbo.2 CTD:9866 GeneCards:GC11M008595 H-InvDB:HIX0201585
HGNC:HGNC:29005 HPA:HPA027420 MIM:612000 neXtProt:NX_O15016
PharmGKB:PA134954583 HOGENOM:HOG000074104 HOVERGEN:HBG057849
KO:K12032 GenomeRNAi:9866 NextBio:37189 ArrayExpress:O15016
Bgee:O15016 CleanEx:HS_TRIM66 Genevestigator:O15016
GermOnline:ENSG00000166436 Uniprot:O15016
Length = 1216
Score = 153 (58.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 333 VETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
+E D C VCL+GGEL+CCD CP ++H SC L P G+W C LC
Sbjct: 967 IENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 1014
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 125 (49.1 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFC 375
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C
Sbjct: 68 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>UNIPROTKB|B5MCJ9 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369 EMBL:AC091053
EMBL:AC104360 IPI:IPI00941834 HGNC:HGNC:29005 HOGENOM:HOG000074104
HOVERGEN:HBG057849 ProteinModelPortal:B5MCJ9 SMR:B5MCJ9
STRING:B5MCJ9 PRIDE:B5MCJ9 Ensembl:ENST00000402157 OMA:HMENERA
OrthoDB:EOG42V8FR ArrayExpress:B5MCJ9 Bgee:B5MCJ9 Uniprot:B5MCJ9
Length = 1245
Score = 153 (58.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 333 VETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
+E D C VCL+GGEL+CCD CP ++H SC L P G+W C LC
Sbjct: 996 IENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 1043
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 156 (60.0 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
S ++E D C VCL GG+L+CCD CP ++H SC L P GDW C LC
Sbjct: 897 SPEIENEDFCAVCLIGGDLLCCDRCPKVFHLSCHVPPLHSFPVGDWICTLC 947
Score = 46 (21.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 189 SMTSRDDQKKSAVKHTHVRISGKQERQKVLPR 220
++ +R ++K+SAV+ T +I G+ K+ R
Sbjct: 119 NLMARVEEKRSAVESTAKQIQGRLHGIKITQR 150
Score = 46 (21.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 29/114 (25%), Positives = 43/114 (37%)
Query: 49 IDEQCSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNLTH 108
I +Q T + P V L +S + GD + K+ + NL H
Sbjct: 458 IHKQAQMQTTAETSCQPMVEL----QSIAARIGDDDDRFDKILAPKQPSLKIKQYTNLMH 513
Query: 109 NLRANLEEKSVMV----TPQT---SQSSSDDALHSRKRRKKNTEV-NLHAKAEA 154
+ N + V TP+ SQSS+D RKR K+ + + H A A
Sbjct: 514 FPKTNTHQNQVSPLRSGTPERASRSQSSADAPRGPRKRLCKDRSIKDAHGLATA 567
Score = 40 (19.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 106 LTHNLRANLEEKSVMVTPQTSQSSSDDALHSRK--RRKKNTEVNL 148
L NL A +EEK V Q LH K +RK ++ +
Sbjct: 116 LLQNLMARVEEKRSAVESTAKQIQG--RLHGIKITQRKAENQIKM 158
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 169 (64.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCCAICGDGKFKQRTLH 394
+ C VC DGGEL+CCD CP YH CL L +IP G+W CP C C GK QR LH
Sbjct: 280 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL-KGKV-QRILH 337
Score = 133 (51.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 313 STDNTAIVKGSNRMKS-------NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG- 364
S +TA+ K S R + + ++ + D C VC GGE+I CD CP YH CL
Sbjct: 176 SEGSTALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDP 235
Query: 365 -LKDIPYGDWFCPLC 378
L+ P G W CP C
Sbjct: 236 ELEKAPEGKWSCPHC 250
Score = 55 (24.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 287 DGGELLCCDACPSSYHLHCLNPPLPEIP---NGEWLCP-RC 323
Score = 37 (18.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 112 ANLEEKSVMVTPQTSQSSSDDALHSRKRRKK 142
++L+ S+ + S+ S+ S++RRKK
Sbjct: 162 SDLDSASIHSSSVRSEGSTALGKKSKRRRKK 192
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 148 (57.2 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 27/44 (61%), Positives = 28/44 (63%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC DGGELICCD CP +H SCL L IP G W C LC
Sbjct: 295 DECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLC 338
Score = 44 (20.5 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 62 NANPAVNLHAKAESESMDFGDLGQ--EENHARHAKRACRFDEGSQ 104
N NP + L A+++S Q H H+K++ GS+
Sbjct: 116 NGNPKLELQARSQSGKKRGVSEKQLTHRTHHHHSKKSLTSSSGSK 160
Score = 41 (19.5 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 401 GLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKW 433
G + TC QC +H C + R W
Sbjct: 413 GELITCPQCLQAYHALCNFPNGRTRCRNCSRSW 445
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 431 GGDLEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Query: 380 C 380
C
Sbjct: 488 C 488
Score = 132 (51.5 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 347 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 406
Query: 378 C 378
C
Sbjct: 407 C 407
Score = 55 (24.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 450 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 486
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 329 TSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 371
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 438 GGDPEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Query: 380 C 380
C
Sbjct: 495 C 495
Score = 132 (51.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 354 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 413
Query: 378 C 378
C
Sbjct: 414 C 414
Score = 55 (24.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 457 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 493
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 336 TSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 378
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 438 GGDLEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Query: 380 C 380
C
Sbjct: 495 C 495
Score = 132 (51.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 354 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 413
Query: 378 C 378
C
Sbjct: 414 C 414
Score = 55 (24.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 457 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 493
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 336 TSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 378
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 438 GGDPEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Query: 380 C 380
C
Sbjct: 495 C 495
Score = 132 (51.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 354 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 413
Query: 378 C 378
C
Sbjct: 414 C 414
Score = 55 (24.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 457 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 493
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 336 TSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 378
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 431 GGDPEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Query: 380 C 380
C
Sbjct: 488 C 488
Score = 132 (51.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 347 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 406
Query: 378 C 378
C
Sbjct: 407 C 407
Score = 55 (24.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 450 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 486
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 329 TSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 371
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 431 GGDPEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Query: 380 C 380
C
Sbjct: 488 C 488
Score = 132 (51.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 347 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 406
Query: 378 C 378
C
Sbjct: 407 C 407
Score = 55 (24.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 450 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 486
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 329 TSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 371
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 458 GGDPEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 514
Query: 380 C 380
C
Sbjct: 515 C 515
Score = 132 (51.5 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 374 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 433
Query: 378 C 378
C
Sbjct: 434 C 434
Score = 55 (24.4 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 477 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 513
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 356 TSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 398
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 460 GGDPEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 516
Query: 380 C 380
C
Sbjct: 517 C 517
Score = 132 (51.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 376 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 435
Query: 378 C 378
C
Sbjct: 436 C 436
Score = 55 (24.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 479 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 515
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 358 TSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 400
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 322 GSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
G + + + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C
Sbjct: 459 GGDPEEEDDHHME---FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 515
Query: 380 C 380
C
Sbjct: 516 C 516
Score = 132 (51.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 321 KGSNRMKS-NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPL 377
KG + + + ++ + D C VC GGE+I CD CP YH CL ++ P G W CP
Sbjct: 375 KGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPH 434
Query: 378 C 378
C
Sbjct: 435 C 435
Score = 55 (24.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 399 DDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
D G + CD C +H C E+ +W C RC
Sbjct: 478 DGGELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCP-RC 514
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 125 TSQSS-SDDALHSRKRRKKNTE-VNLHAKAEAESMDFGNLGQE 165
TS+SS S L + K++KK E V E + D+ + Q+
Sbjct: 357 TSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQ 399
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 146 (56.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/51 (54%), Positives = 33/51 (64%)
Query: 331 HQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
HQ + D C VC DGGELICCD CP +H +CL L++IP G W C CC
Sbjct: 294 HQ-KNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCS-CC 342
Score = 45 (20.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 111 RANLEEKSVMVTPQT--SQSSSDDALHSRKRRKKNTEVNLHAKAEAESMDFGN 161
R LEE P T S+S S HS+ + K E NL E++ + GN
Sbjct: 133 RRALEEPRA-TPPATLASKSISSPGSHSKAKPPKKPEGNL----ESQRLPLGN 180
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 143 (55.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCC 379
D C VC DGGELICCD CP +H +CL L++IP G W C CC
Sbjct: 299 DECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCS-CC 342
Score = 45 (20.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 376 PLCCCAICGDGKFKQRTLH 394
P C++CGDG R H
Sbjct: 430 PSARCSVCGDGTEVLRCAH 448
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 163 (62.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 28/56 (50%), Positives = 34/56 (60%)
Query: 327 KSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLCCC 380
+ + H +E C VC DGGEL+CCD CP YH CL L +IP G+W CP C C
Sbjct: 413 EEDDHHME---FCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCTC 465
Score = 37 (18.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 115 EEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQEDDN 168
EE+ V+ S S D +K++KK K++A+ + + +EDD+
Sbjct: 65 EEEEVL----RSDSEGSDYTPGKKKKKK-LGPKKEKKSKAKRKEEEDEEEEDDD 113
>UNIPROTKB|D4A3R4 [details] [associations]
symbol:Whsc1l1 "Protein Whsc1l1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00393216 Ensembl:ENSRNOT00000031675
ArrayExpress:D4A3R4 Uniprot:D4A3R4
Length = 1439
Score = 149 (57.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 33/73 (45%), Positives = 38/73 (52%)
Query: 314 TDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYG 371
T N A +K R K+ + Q+ D C C DGGEL+ CD CP YH CL L PYG
Sbjct: 1303 TKN-AKLKKRRRGKAEAKQIHE-DYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYG 1360
Query: 372 DWFCPLCCCAICG 384
W CP C CG
Sbjct: 1361 KWECPWHQCDECG 1373
Score = 48 (22.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKA 152
F EG ++ + LEE + +Q S +AL K +K H KA
Sbjct: 1029 FAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIEKTSRKPPPYK-HIKA 1081
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/141 (21%), Positives = 57/141 (40%)
Query: 36 KTFYSLRTACRSLIDEQCSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKR 95
KT S+R R +I +N +A+P E+ S G G E + +R
Sbjct: 532 KTEISVRGQDRLIISSPSQRNEKSTPSASPP-------EATS---GSAGPVEK--KQQRR 579
Query: 96 ACRFDEGSQNLTHNL-RANLEEKSVMVTPQTSQSS---------SDDALHSRKRRKKNTE 145
+ R S+ T + + ++++ V +PQ S + SD +KR + +T+
Sbjct: 580 SIRTRSESEKSTEVVSKKKIKKEQVETSPQASLKTGLQKGASEISDSCKPLKKRSRASTD 639
Query: 146 VNLHAKAEAESMDFGNLGQED 166
V + ++ D + G D
Sbjct: 640 VETASCTYRDTSDSDSRGPSD 660
Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 1181 LIDEEECRLRIK-RAHENSVTNFYMLTVTKDRII-DAGPKGNYSRFMNHSCNPNCETQKW 1238
Query: 107 THN 109
T N
Sbjct: 1239 TVN 1241
>RGD|1308980 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016571 "histone methylation" evidence=ISO]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA;ISO] [GO:0034968 "histone lysine methylation"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00204321 Ensembl:ENSRNOT00000021053
UCSC:RGD:1308980 ArrayExpress:D4AC06 Uniprot:D4AC06
Length = 1443
Score = 149 (57.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 33/73 (45%), Positives = 38/73 (52%)
Query: 314 TDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYG 371
T N A +K R K+ + Q+ D C C DGGEL+ CD CP YH CL L PYG
Sbjct: 1307 TKN-AKLKKRRRGKAEAKQIHE-DYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYG 1364
Query: 372 DWFCPLCCCAICG 384
W CP C CG
Sbjct: 1365 KWECPWHQCDECG 1377
Score = 48 (22.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKA 152
F EG ++ + LEE + +Q S +AL K +K H KA
Sbjct: 1033 FAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIEKTSRKPPPYK-HIKA 1085
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/141 (21%), Positives = 57/141 (40%)
Query: 36 KTFYSLRTACRSLIDEQCSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKR 95
KT S+R R +I +N +A+P E+ S G G E + +R
Sbjct: 539 KTEISVRGQDRLIISSPSQRNEKSTPSASPP-------EATS---GSAGPVEK--KQQRR 586
Query: 96 ACRFDEGSQNLTHNL-RANLEEKSVMVTPQTSQSS---------SDDALHSRKRRKKNTE 145
+ R S+ T + + ++++ V +PQ S + SD +KR + +T+
Sbjct: 587 SIRTRSESEKSTEVVSKKKIKKEQVETSPQASLKTGLQKGASEISDSCKPLKKRSRASTD 646
Query: 146 VNLHAKAEAESMDFGNLGQED 166
V + ++ D + G D
Sbjct: 647 VETASCTYRDTSDSDSRGPSD 667
Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 1185 LIDEEECRLRIK-RAHENSVTNFYMLTVTKDRII-DAGPKGNYSRFMNHSCNPNCETQKW 1242
Query: 107 THN 109
T N
Sbjct: 1243 TVN 1245
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 159 (61.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 28/54 (51%), Positives = 33/54 (61%)
Query: 327 KSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ + H +E C VC DGGEL+CCD CP YH CL L DIP G+W CP C
Sbjct: 451 EEDDHHME---FCRVCKDGGELLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRC 501
Score = 40 (19.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 115 EEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQ 164
EE VM S+S D S+K++K+++ K A G+ G+
Sbjct: 74 EEDRVM----RSESEGSDYAPSKKKKKRSSSSKDRKKGSAGEKAGGSGGK 119
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 130 (50.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 48 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 100
Score = 63 (27.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 26/118 (22%), Positives = 47/118 (39%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELI----GKPFSISENNL 461
CD C FH C L +W C + EHV + L + F ++ +
Sbjct: 285 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHVVLNQKNLTLSNRCRVFDRFQDTI 341
Query: 462 NWRLLKS--LESDHQDVSNPTDGKFLKELQRK---LHGAVEVMHECFEPAKEPLTGRD 514
+ ++K L H+ +P + + L+ ++RK + A++ + P P RD
Sbjct: 342 SQHVVKVDFLNRIHK--KHPPNRRVLQSVKRKGLKVPDAIKSQYRLPPPLLAPAAIRD 397
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 130 (50.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 59 (25.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHV 442
CD C FH C L +W C + EHV
Sbjct: 289 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 135 (52.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 313 STDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPY 370
++ + ++ G R + + ++ D C VC +GGEL+CC+ CP ++H SC L + P
Sbjct: 58 ASQKSPLLVGETRKEDDPNE----DWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPS 113
Query: 371 GDWFCPLC 378
G+W C C
Sbjct: 114 GEWICTFC 121
>UNIPROTKB|J9P6F3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AAEX03010393 Ensembl:ENSCAFT00000048373
Uniprot:J9P6F3
Length = 850
Score = 142 (55.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 43/127 (33%), Positives = 55/127 (43%)
Query: 282 EVHAGSKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNR-MKSNSHQVETYDMCV 340
E H G++N + FL R C+ A +K R +K+ Q+ D C
Sbjct: 685 ECHCGAEN----CSGFL-GVRPKSTCVSTTEEKAKNAKLKQKRRKIKAEPKQMHE-DYCF 738
Query: 341 VCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPLCCCAICGDG--KFKQRTLHSV 396
C DGGEL+ CD CP YH CL L PYG W CP C C F + HS
Sbjct: 739 QCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCEECSSAAVSFCEFCPHSF 798
Query: 397 --DDDDG 401
D ++G
Sbjct: 799 CKDHEEG 805
Score = 48 (22.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKA 152
F EG ++ + LEE + +Q S +AL K +K H KA
Sbjct: 439 FAEGQTSINKTFKKALEEAAKRFQELKAQRESREALEIEKNSRKPPPYK-HIKA 491
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 130 SDDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQED 166
SD +KR + +T+V + + A ++ D + G D
Sbjct: 36 SDSCKPLKKRSRASTDVEMTSSAYRDTSDSDSRGLSD 72
Score = 43 (20.2 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 223 VCNPRAVVLS------KLIENNVVFPGAKVCYGGKKGRV-PLAKG--SITNGGIKCN 270
+CNPR+V L+ L + V F G+ Y +GRV P +G S G N
Sbjct: 391 ICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSIN 447
Score = 40 (19.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 591 LIDEEECRLRIK-RAHENSVTNFYMLTVTKDRII-DAGPKGNYSRFMNHSCNPNCETQKW 648
Query: 107 THN 109
T N
Sbjct: 649 TVN 651
>TAIR|locus:2195945 [details] [associations]
symbol:AT1G77250 "AT1G77250" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:BT025330
IPI:IPI00544228 RefSeq:NP_177849.2 UniGene:At.50042
ProteinModelPortal:Q1JPM3 SMR:Q1JPM3 PaxDb:Q1JPM3 PRIDE:Q1JPM3
EnsemblPlants:AT1G77250.1 GeneID:844061 KEGG:ath:AT1G77250
TAIR:At1g77250 eggNOG:NOG147697 HOGENOM:HOG000090483
InParanoid:Q1JPM3 OMA:CQHAFLN PhylomeDB:Q1JPM3
Genevestigator:Q1JPM3 Uniprot:Q1JPM3
Length = 522
Score = 139 (54.0 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 47/149 (31%), Positives = 61/149 (40%)
Query: 300 DGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETY---DMCVVC---LD-GGELICCD 352
D RS VD N + S M H VE ++C C +D GG+ I CD
Sbjct: 314 DNRS-VDTSTECKEDSNESEENSSCNMNHEVHHVEMSRDSELCRTCGTKVDSGGKYITCD 372
Query: 353 H--CPCMY-HSSCLGLKDIP-YG-DWFCPLCCCAICGDGKFKQRTLHSVDDDDGLVRTCD 407
H CP Y H CL + I +G W+C C C C K DDD +V CD
Sbjct: 373 HPFCPHKYYHIRCLTSRQIKLHGVRWYCSSCLCRNCLTDK----------DDDKIV-LCD 421
Query: 408 QCEHKFHTGCTRKSKRELKVKSQNKWFCS 436
C+ +H C R + +WFC+
Sbjct: 422 GCDDAYHIYCMRPPCESVP---NGEWFCT 447
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 130 (50.8 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 62 (26.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 26/118 (22%), Positives = 48/118 (40%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELI----GKPFSISENNL 461
CD C FH C L +W C + EHV + L + F ++ +
Sbjct: 289 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHVVLNQKNLTLSNRCQVFDRFQDTI 345
Query: 462 NWRLLKS--LESDHQDVSNPTDGKFLKELQR---KLHGAVEVMHECFEPAKEPLTGRD 514
+ ++K L H+ +P + + L+ ++R K+ A++ ++ P P RD
Sbjct: 346 SQHVVKVDFLNRIHK--KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRD 401
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 130 (50.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 74 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 126
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 145 (56.1 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 37/118 (31%), Positives = 50/118 (42%)
Query: 332 QVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLCC---CAICGDG 386
+ E D C C GEL+ CD CP YH+ C+ +++ P GDW C C + +
Sbjct: 252 EAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEE 311
Query: 387 KFKQRT--LHSVDDDDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHV 442
KQ + + L+ CD C FH C E V + W C RCE V
Sbjct: 312 PAKQNDEFCKICKETENLL-LCDSCVCSFHAYCIDPPLTE--VPKEETWSCP-RCETV 365
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 145 (56.1 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 37/118 (31%), Positives = 50/118 (42%)
Query: 332 QVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLCC---CAICGDG 386
+ E D C C GEL+ CD CP YH+ C+ +++ P GDW C C + +
Sbjct: 252 EAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEE 311
Query: 387 KFKQRT--LHSVDDDDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHV 442
KQ + + L+ CD C FH C E V + W C RCE V
Sbjct: 312 PAKQNDEFCKICKETENLL-LCDSCVCSFHAYCIDPPLTE--VPKEETWSCP-RCETV 365
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 130 (50.8 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 59 (25.8 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHV 442
CD C FH C L +W C + EHV
Sbjct: 288 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHV 321
Score = 38 (18.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 446 LH-ELIGKPFSI 456
LH EL KPFSI
Sbjct: 202 LHFELFSKPFSI 213
>RGD|1307748 [details] [associations]
symbol:Nsd1 "nuclear receptor binding SET domain protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001702 "gastrulation with mouth forming second"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003712
"transcription cofactor activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0010452
"histone H3-K36 methylation" evidence=ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISO] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0042054 "histone
methyltransferase activity" evidence=ISO] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1307748 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:CH474032
CTD:64324 KO:K15588 OrthoDB:EOG49GKFN IPI:IPI00779102
RefSeq:NP_001100807.1 UniGene:Rn.224915 Ensembl:ENSRNOT00000060928
GeneID:306764 KEGG:rno:306764 UCSC:RGD:1307748 NextBio:656473
Uniprot:D4AA06
Length = 2381
Score = 146 (56.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CCD CP +H CL + DIP G+W+C C
Sbjct: 1386 RRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1438
Score = 132 (51.5 bits), Expect = 0.00023, P = 0.00023
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 334 ETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPLCCCAICG 384
E D C C DGG+L+ C CP +YH+ CL L P G W CP C +CG
Sbjct: 1806 EREDECFSCGDGGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDVCG 1858
>MGI|MGI:1276545 [details] [associations]
symbol:Nsd1 "nuclear receptor-binding SET-domain protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IMP]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0010452 "histone H3-K36
methylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IC] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=IDA]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046966
"thyroid hormone receptor binding" evidence=IPI] [GO:0046975
"histone methyltransferase activity (H3-K36 specific)"
evidence=ISO;IDA] [GO:0050681 "androgen receptor binding"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
EMBL:AF064553 MGI:MGI:1276545 Pfam:PF00855 GO:GO:0003714
GO:GO:0005694 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 UniGene:Mm.12964
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0050681 eggNOG:COG2940 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0046975 GO:GO:0035097
HOGENOM:HOG000113857 HOVERGEN:HBG007518 OrthoDB:EOG49GKFN
ChiTaRS:NSD1 EMBL:AK082820 EMBL:AK004485 IPI:IPI00131111 PIR:T14342
UniGene:Mm.168965 ProteinModelPortal:O88491 SMR:O88491
STRING:O88491 PhosphoSite:O88491 PaxDb:O88491 PRIDE:O88491
UCSC:uc007qqd.1 CleanEx:MM_NSD1 Genevestigator:O88491
GermOnline:ENSMUSG00000021488 Uniprot:O88491
Length = 2588
Score = 146 (56.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CCD CP +H CL + DIP G+W+C C
Sbjct: 1594 RRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1646
>UNIPROTKB|E1B7A1 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:DAAA02048610 IPI:IPI00688031 RefSeq:NP_001179060.1
UniGene:Bt.52047 PRIDE:E1B7A1 Ensembl:ENSBTAT00000021255
GeneID:507057 KEGG:bta:507057 NextBio:20867881 Uniprot:E1B7A1
Length = 1004
Score = 130 (50.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 61 (26.5 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 25/118 (21%), Positives = 48/118 (40%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELI----GKPFSISENNL 461
CD C FH C L +W C + EHV + + + F ++ +
Sbjct: 289 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTI 345
Query: 462 NWRLLKS--LESDHQDVSNPTDGKFLKELQR---KLHGAVEVMHECFEPAKEPLTGRD 514
+ ++K L H+ +P + + L+ ++R K+ A++ ++ P P RD
Sbjct: 346 SQHVVKVDFLNRIHK--KHPPNRRMLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRD 401
>UNIPROTKB|E2QYC0 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:MSSQAQG
GeneTree:ENSGT00440000033777 EMBL:AAEX03006672
Ensembl:ENSCAFT00000029911 Uniprot:E2QYC0
Length = 910
Score = 130 (50.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 60 (26.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 25/118 (21%), Positives = 48/118 (40%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELI----GKPFSISENNL 461
CD C FH C L +W C + EHV + + + F ++ +
Sbjct: 289 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTI 345
Query: 462 NWRLLKS--LESDHQDVSNPTDGKFLKELQR---KLHGAVEVMHECFEPAKEPLTGRD 514
+ ++K L H+ +P + + L+ ++R K+ A++ ++ P P RD
Sbjct: 346 SQHVVKVDFLNRIHK--KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRD 401
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 141 (54.7 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 328 SNSHQVETYDM-CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAIC 383
+N Q D C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C
Sbjct: 54 NNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAEC 113
Query: 384 GDGKFKQRTLHSVD 397
+ + K T+ +++
Sbjct: 114 IETQSKAMTMLTIE 127
>UNIPROTKB|E2R8R1 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:AAEX03013984 EMBL:AAEX03013985
Ensembl:ENSCAFT00000017108 OMA:PTINKGR Uniprot:E2R8R1
Length = 1143
Score = 142 (55.0 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 323 SNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---C 379
+N K + + Y C VC G+++CC+ CP +YH+ CL L P GDWFCP C
Sbjct: 72 NNNNKEQDGRNDFY--CWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKIT 129
Query: 380 CAICGDGKFKQRTLHSVD 397
A C + + K T+ +++
Sbjct: 130 VAECIETQSKAMTMLTIE 147
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 130 (50.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 59 (25.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHV 442
CD C FH C L +W C + EHV
Sbjct: 289 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|B7ZM62 [details] [associations]
symbol:ZMYND8 "ZMYND8 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:BC136608 EMBL:BC144289 IPI:IPI00922821
SMR:B7ZM62 STRING:B7ZM62 Ensembl:ENST00000458360 UCSC:uc010zxz.1
HOGENOM:HOG000230951 Uniprot:B7ZM62
Length = 1054
Score = 141 (54.7 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 328 SNSHQVETYDM-CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAIC 383
+N Q D C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C
Sbjct: 74 NNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAEC 133
Query: 384 GDGKFKQRTLHSVD 397
+ + K T+ +++
Sbjct: 134 IETQSKAMTMLTIE 147
>UNIPROTKB|F1RNA4 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:FP236132 RefSeq:XP_003131823.2 UniGene:Ssc.50204
Ensembl:ENSSSCT00000019351 GeneID:100515341 KEGG:ssc:100515341
Uniprot:F1RNA4
Length = 1004
Score = 130 (50.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 60 (26.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 25/118 (21%), Positives = 48/118 (40%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELI----GKPFSISENNL 461
CD C FH C L +W C + EHV + + + F ++ +
Sbjct: 289 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTI 345
Query: 462 NWRLLKS--LESDHQDVSNPTDGKFLKELQR---KLHGAVEVMHECFEPAKEPLTGRD 514
+ ++K L H+ +P + + L+ ++R K+ A++ ++ P P RD
Sbjct: 346 SQHVVKVDFLNRIHK--KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRD 401
>UNIPROTKB|Q2HXV1 [details] [associations]
symbol:ZMYND8 "RACK7 isoform l" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 Pfam:PF00855 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
EMBL:DQ368680 IPI:IPI01009867 SMR:Q2HXV1 Ensembl:ENST00000540497
UCSC:uc002xsv.1 Uniprot:Q2HXV1
Length = 1134
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 328 SNSHQVETYDM-CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAIC 383
+N Q D C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C
Sbjct: 74 NNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAEC 133
Query: 384 GDGKFKQRTLHSVD 397
+ + K T+ +++
Sbjct: 134 IETQSKAMTMLTIE 147
>UNIPROTKB|Q2HXV3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:DQ368678 IPI:IPI00941004 SMR:Q2HXV3
STRING:Q2HXV3 Ensembl:ENST00000372023 UCSC:uc010ghr.1
Uniprot:Q2HXV3
Length = 1136
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 328 SNSHQVETYDM-CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAIC 383
+N Q D C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C
Sbjct: 74 NNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAEC 133
Query: 384 GDGKFKQRTLHSVD 397
+ + K T+ +++
Sbjct: 134 IETQSKAMTMLTIE 147
>UNIPROTKB|O96028 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003149 "membranous
septum morphogenesis" evidence=IEA] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IEA] [GO:0003290 "atrial septum
secundum morphogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0060348 "bone development" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 EMBL:CH471131 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0031965 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0009653 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AL132868
GO:GO:0003149 GO:GO:0003290 Orphanet:280 KO:K11424 EMBL:AF071593
EMBL:AF071594 EMBL:AF083386 EMBL:AF083387 EMBL:AF083388
EMBL:AF083389 EMBL:AF083390 EMBL:AF083391 EMBL:AF178206
EMBL:AF178199 EMBL:AF178198 EMBL:AF178202 EMBL:AF178204
EMBL:AF178205 EMBL:AF178203 EMBL:AF178201 EMBL:AF178200
EMBL:AF178219 EMBL:AF178207 EMBL:AF178216 EMBL:AF178215
EMBL:AF178214 EMBL:AF178213 EMBL:AF178212 EMBL:AF178211
EMBL:AF178210 EMBL:AF178209 EMBL:AF178208 EMBL:AF178218
EMBL:AF178217 EMBL:AF330040 EMBL:AY694128 EMBL:AJ007042
EMBL:AB029013 EMBL:AK289697 EMBL:AC105448 EMBL:BC052254
EMBL:BC070176 EMBL:BC094825 EMBL:BC141815 EMBL:BC152412
IPI:IPI00107486 IPI:IPI00107487 IPI:IPI00218240 IPI:IPI00334604
IPI:IPI00470433 IPI:IPI00790144 IPI:IPI00792674
RefSeq:NP_001035889.1 RefSeq:NP_015627.1 RefSeq:NP_579877.1
RefSeq:NP_579878.1 RefSeq:NP_579889.1 RefSeq:NP_579890.1
UniGene:Hs.113876 HSSP:Q9BYU8 ProteinModelPortal:O96028 SMR:O96028
IntAct:O96028 MINT:MINT-7103764 STRING:O96028 PhosphoSite:O96028
PaxDb:O96028 PRIDE:O96028 DNASU:7468 Ensembl:ENST00000312087
Ensembl:ENST00000353275 Ensembl:ENST00000382888
Ensembl:ENST00000382891 Ensembl:ENST00000382892
Ensembl:ENST00000382895 Ensembl:ENST00000398261
Ensembl:ENST00000420906 Ensembl:ENST00000436793
Ensembl:ENST00000503128 Ensembl:ENST00000508803
Ensembl:ENST00000512700 Ensembl:ENST00000514045 GeneID:7468
KEGG:hsa:7468 UCSC:uc003gdx.3 UCSC:uc003gdy.1 UCSC:uc003gdz.4
UCSC:uc003geg.1 UCSC:uc003geh.1 UCSC:uc003gei.4 CTD:7468
GeneCards:GC04P001840 HGNC:HGNC:12766 HPA:HPA015315 HPA:HPA015801
MIM:602952 neXtProt:NX_O96028 PharmGKB:PA37369 HOVERGEN:HBG053345
InParanoid:O96028 OMA:DVKRCVV ChiTaRS:WHSC1 GenomeRNAi:7468
NextBio:29246 ArrayExpress:O96028 Bgee:O96028 Genevestigator:O96028
GermOnline:ENSG00000109685 Uniprot:O96028
Length = 1365
Score = 148 (57.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 38/116 (32%), Positives = 49/116 (42%)
Query: 321 KGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPLC 378
K R + ++ D C C DGG+L+ CD C YH SCLGL P+G W CP
Sbjct: 1224 KTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWH 1283
Query: 379 CCAICG--DGKFKQRTLHSV--DDDDGLVRTCDQ------CEHKFHTGCTRKSKRE 424
C +CG F +S + DG +C CEH R +K E
Sbjct: 1284 HCDVCGKPSTSFCHLCPNSFCKEHQDGTAFSCTPDGRSYCCEHDLGAASVRSTKTE 1339
Score = 129 (50.5 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 327 KSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
K H C VC GG L+CC+ CP +H CL + ++P G WFC C
Sbjct: 821 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNI-EMPDGSWFCNDC 872
Score = 46 (21.3 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 15/54 (27%), Positives = 20/54 (37%)
Query: 384 GDGKFKQRTLHSVDDDDGLVRTCDQ--CEHKFHTGCTRKSKRELKVKSQNKWFC 435
G+GK + D G + CD+ C +H C KR KW C
Sbjct: 1232 GEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPF-----GKWEC 1280
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 134 LHSRKRRKKNTEVNLHAKAEAESMDFGNLGQEDDN 168
L ++R + NT+ L A +AE D GN+ + N
Sbjct: 494 LSEKQRARYNTKFALVAPVQAEE-DSGNVNGKKRN 527
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 328 SNSHQVETYDM-CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAIC 383
+N Q D C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C
Sbjct: 79 NNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAEC 138
Query: 384 GDGKFKQRTLHSVD 397
+ + K T+ +++
Sbjct: 139 IETQSKAMTMLTIE 152
>ZFIN|ZDB-GENE-030131-2773 [details] [associations]
symbol:trim33 "tripartite motif-containing 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IGI;IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035166 "post-embryonic hemopoiesis" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 ZFIN:ZDB-GENE-030131-2773
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0034243
GO:GO:0035166 GO:GO:0060215 HOGENOM:HOG000252971 HOVERGEN:HBG054599
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 GO:GO:0033333
EMBL:BX321886 IPI:IPI00512685 RefSeq:NP_001002871.2
UniGene:Dr.80165 SMR:B0S5U2 Ensembl:ENSDART00000020116
GeneID:324053 KEGG:dre:324053 NextBio:20808565 Uniprot:B0S5U2
Length = 1176
Score = 150 (57.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC +GGEL+CCDHCP ++H +C LK P GDW C C
Sbjct: 935 DWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFC 978
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 20 QKGGYKQEIRYTSPNQKT 37
Q+ G ++E YT N KT
Sbjct: 818 QEPGVEEECSYTGANVKT 835
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 310 HMVSTDNTAIVKGSNRMKSNSHQVETYDMCVV 341
H+++ N AI GS+ S ++ TY + ++
Sbjct: 430 HVLNFTNWAITNGSSTALLYSKRLITYQLRLI 461
Score = 39 (18.8 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 75 SESMDFGDLGQEENHARHAKRACRFDEGSQNL-THNLRANLEEKSVMVTPQTSQSSSDDA 133
S +M+ G EEN AK E ++ T A E KS PQ +SSD +
Sbjct: 13 SANMEVEASGTEENGDGGAKEP----EAVVSIDTEPKEAADEAKSQETVPQAPTTSSDSS 68
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 130 (50.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHV 442
CD C FH C L +W C + EHV
Sbjct: 288 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHV 321
>UNIPROTKB|Q96QT6 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001222
"transcription corepressor binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0016580 "Sin3 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 EMBL:CH471159
GO:GO:0001106 GO:GO:0016580 PDB:2LKM PDBsum:2LKM EMBL:AY030283
EMBL:AK024290 EMBL:AK160370 EMBL:BC001657 EMBL:BC121044
EMBL:AB040956 IPI:IPI00290033 IPI:IPI00292750 IPI:IPI00441976
IPI:IPI00607816 RefSeq:NP_001028733.1 RefSeq:NP_065940.1
UniGene:Hs.444173 PDB:2L9S PDBsum:2L9S ProteinModelPortal:Q96QT6
SMR:Q96QT6 DIP:DIP-59632N IntAct:Q96QT6 STRING:Q96QT6
PhosphoSite:Q96QT6 DMDM:71153050 PaxDb:Q96QT6 PRIDE:Q96QT6
Ensembl:ENST00000268756 Ensembl:ENST00000332830 GeneID:57649
KEGG:hsa:57649 UCSC:uc002hdg.1 UCSC:uc002hdj.1 CTD:57649
GeneCards:GC17M027232 H-InvDB:HIX0202392 HGNC:HGNC:20816
HPA:HPA021410 neXtProt:NX_Q96QT6 PharmGKB:PA134954478
eggNOG:NOG145066 HOGENOM:HOG000220810 HOVERGEN:HBG057884
InParanoid:Q96QT6 OMA:MSSQAQG OrthoDB:EOG4VHK63 ChiTaRS:PHF12
EvolutionaryTrace:Q96QT6 GenomeRNAi:57649 NextBio:64390
ArrayExpress:Q96QT6 Bgee:Q96QT6 CleanEx:HS_PHF12
Genevestigator:Q96QT6 GermOnline:ENSG00000109118 Uniprot:Q96QT6
Length = 1004
Score = 130 (50.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 330 SHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
S + +D C C +GG+L+CCDHCP +H C L + +P G+W C C
Sbjct: 50 SGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHV 442
CD C FH C L +W C + EHV
Sbjct: 289 CDYCPLLFHMDCLEPP---LTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 66 CWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLT 125
Query: 396 VD 397
++
Sbjct: 126 IE 127
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 18 CWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLT 77
Query: 396 VD 397
++
Sbjct: 78 IE 79
>UNIPROTKB|E1C6X8 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00700000104009 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 CTD:54904 KO:K11425 OMA:MEKDIHK
EMBL:AADN02054858 IPI:IPI00603343 RefSeq:XP_001232891.1
UniGene:Gga.29652 UniGene:Gga.53440 Ensembl:ENSGALT00000005228
GeneID:426778 KEGG:gga:426778 NextBio:20828194 Uniprot:E1C6X8
Length = 1436
Score = 142 (55.0 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 28/70 (40%), Positives = 36/70 (51%)
Query: 316 NTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDW 373
N + + ++K+ Q+ D C C DGGEL+ CD CP YH CL L P+G W
Sbjct: 1301 NAKLKQKKRKIKTEQKQMHE-DNCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPFGKW 1359
Query: 374 FCPLCCCAIC 383
CP C IC
Sbjct: 1360 ECPWHQCDIC 1369
Score = 52 (23.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 62 NANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNL-RANLEEKSVM 120
N N+ A S G G E + +R+ R S+ T + + ++++ V
Sbjct: 547 NEKATCNVQ-NASSPETTSGSAGSVEK--KQQRRSIRTRSESEKSTEVVPKKKIKKEQVE 603
Query: 121 VTPQTSQSS---------SDDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQED 166
+ P T+ + SD +KR + +T+V L + A ++ D + G D
Sbjct: 604 MVPLTAVKTGLQKGASEISDSCKPLKKRSRASTDVELTSSAYRDASDSDSRGLND 658
Score = 44 (20.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKK 142
F EG ++ + LEE + +Q S +AL + +K
Sbjct: 1025 FAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIERNSRK 1068
Score = 43 (20.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 223 VCNPRAVVLS-KLIENNVV-FP----GAKVCYGGKKGRV-PLAKG--SITNGGIKCN 270
+CNPR+V L+ + +++++ FP G+ Y +GRV P +G S G N
Sbjct: 977 ICNPRSVPLNIQGLKHDIGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSIN 1033
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 1177 LIDEEECRLRIK-RAHENSVTNFYMLTVTKDRII-DAGPKGNYSRFMNHSCNPNCETQKW 1234
Query: 107 THN 109
T N
Sbjct: 1235 TVN 1237
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 140 (54.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 91 CWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLT 150
Query: 396 VD 397
++
Sbjct: 151 IE 152
>UNIPROTKB|F1MY77 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:DAAA02036805
IPI:IPI00727342 UniGene:Bt.52435 Ensembl:ENSBTAT00000004258
NextBio:20867417 Uniprot:F1MY77
Length = 1193
Score = 140 (54.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 111 CWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLT 170
Query: 396 VD 397
++
Sbjct: 171 IE 172
>UNIPROTKB|F1M0S9 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
RGD:1309544 IPI:IPI00949507 Ensembl:ENSRNOT00000065165
ArrayExpress:F1M0S9 Uniprot:F1M0S9
Length = 1226
Score = 140 (54.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 88 CWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLT 147
Query: 396 VD 397
++
Sbjct: 148 IE 149
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 140 (54.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 118 CWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLT 177
Query: 396 VD 397
++
Sbjct: 178 IE 179
>UNIPROTKB|F1RZJ3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:CU570721 Ensembl:ENSSSCT00000017228
Uniprot:F1RZJ3
Length = 1437
Score = 139 (54.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/70 (40%), Positives = 35/70 (50%)
Query: 316 NTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDW 373
N + + ++K+ Q+ D C C DGGEL+ CD CP YH CL L PYG W
Sbjct: 1302 NAKLKQKRRKVKTEPKQLHE-DYCFQCGDGGELVMCDRKDCPKAYHLLCLNLPQPPYGKW 1360
Query: 374 FCPLCCCAIC 383
CP C C
Sbjct: 1361 ECPWHQCDEC 1370
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKA 152
F EG ++ + LEE + +Q S +AL + K +K H KA
Sbjct: 1026 FAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALETEKNSRKPPPYK-HIKA 1078
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 20/96 (20%), Positives = 41/96 (42%)
Query: 81 GDLGQEENHARHAKRACRFDEGSQNLTHNL-RANLEEKSVMVTPQTSQSS---------S 130
G G E + +R+ R S+ T + + ++++ V PQ + + S
Sbjct: 566 GPTGSVEK--KQQRRSIRTRSESEKSTEVVPKKKIKKEQVETVPQATVKTGLQKGASEIS 623
Query: 131 DDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQED 166
D +KR + +T+V + + A ++ D + G D
Sbjct: 624 DSCKPLKKRSRASTDVEMASSAYRDTSDSDSRGLSD 659
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 223 VCNPRAVVLS------KLIENNVVFPGAKVCYGGKKGRV-PLAKG--SITNGGIKCN 270
+CNPR+V L+ L + V F G+ Y +GRV P +G S G N
Sbjct: 978 ICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSIN 1034
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 1178 LIDEEECRLRIK-RAHENSVTNFYMLTVTKDRII-DAGPKGNYSRFMNHSCNPNCETQKW 1235
Query: 107 THN 109
T N
Sbjct: 1236 TVN 1238
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 138 (53.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 25/50 (50%), Positives = 30/50 (60%)
Query: 331 HQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
HQ + D C C DGGEL+CCD CP +H +CL L +IP G W C C
Sbjct: 300 HQ-KNEDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNC 348
Score = 43 (20.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 380 CAICGDGKFKQRTLH 394
C +CGDG R H
Sbjct: 442 CGVCGDGADALRCAH 456
>FB|FBgn0023097 [details] [associations]
symbol:bon "bonus" species:7227 "Drosophila melanogaster"
[GO:0003713 "transcription coactivator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0048666
"neuron development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0005634 GO:GO:0007411
GO:GO:0046872 GO:GO:0008270 GO:GO:0007422 GO:GO:0003682
GO:GO:0048813 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006325 Gene3D:1.20.920.10 SUPFAM:SSF47370
HSSP:Q9UIG0 FlyBase:FBgn0023097 EMBL:AF210315
ProteinModelPortal:Q9U3Y7 SMR:Q9U3Y7 STRING:Q9U3Y7 PRIDE:Q9U3Y7
InParanoid:Q9U3Y7 OrthoDB:EOG48KPS6 ArrayExpress:Q9U3Y7 Bgee:Q9U3Y7
Uniprot:Q9U3Y7
Length = 1133
Score = 144 (55.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/87 (37%), Positives = 45/87 (51%)
Query: 298 LEDGRSLVDCLRHMVSTD--NTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCP 355
L +GR+ + STD NT V N K + ++ D C VCLDGGEL+CCD CP
Sbjct: 861 LPEGRTKTTSPQVHSSTDLSNTQEVNNKNEQKDDPNE----DWCAVCLDGGELMCCDKCP 916
Query: 356 CMYHSSCL--GLKDIP--YGDWFCPLC 378
++H +C + +P W C LC
Sbjct: 917 KVFHQNCHIPAISSLPDESESWQCLLC 943
Score = 44 (20.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/83 (21%), Positives = 34/83 (40%)
Query: 41 LRTACRSLIDEQCSQNLTLNL---NANPAVNLHAKAESESMDFGDLGQEENHARHAKRA- 96
L C S + + TL L N + ++ A + DF L +++ RH ++
Sbjct: 348 LNEVCDSKLKVLVEKKETLQLLSDNTDHCIDFMQNALEKGSDFAILSSKKSLVRHLQKLK 407
Query: 97 C-RFDEGSQNLTHNLRANLEEKS 118
C R D + + ++ L + S
Sbjct: 408 CQRADIPNPEIPVRIQVQLNQVS 430
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 136 (52.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 321 KGSNRMKSNSH-QVETYDMCVVCLDGGELICCDHCPCM--YHSSCLGLKDIPYGDWFCPL 377
K + R +S + + D C C DGG+L+ CD C YH CLGL P+G W CP
Sbjct: 1219 KRTRRRRSKGEGKKRSEDECFRCGDGGQLVLCDRKSCTKAYHLPCLGLGKRPFGKWECPW 1278
Query: 378 CCCAICG 384
C +CG
Sbjct: 1279 HHCDVCG 1285
Score = 129 (50.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 327 KSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
K H C VC GG L+CC+ CP +H CL + ++P G WFC C
Sbjct: 817 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNI-EMPDGSWFCNDC 868
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 102 GSQ--NLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRK-KNTEVNLHAKAEAE 155
GSQ LT +A K +V P S+ S + L+ +KR K T+ + A A+AE
Sbjct: 484 GSQWDVLTEKQKARYNTKFALVAPSQSEEESGN-LNGKKRNHVKRTQDSTEA-ADAE 538
>UNIPROTKB|E2QUJ0 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:MEKDIHK
EMBL:AAEX03010393 Ensembl:ENSCAFT00000009828 Uniprot:E2QUJ0
Length = 1438
Score = 142 (55.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 43/127 (33%), Positives = 55/127 (43%)
Query: 282 EVHAGSKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNR-MKSNSHQVETYDMCV 340
E H G++N + FL R C+ A +K R +K+ Q+ D C
Sbjct: 1273 ECHCGAEN----CSGFL-GVRPKSTCVSTTEEKAKNAKLKQKRRKIKAEPKQMHE-DYCF 1326
Query: 341 VCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPLCCCAICGDG--KFKQRTLHSV 396
C DGGEL+ CD CP YH CL L PYG W CP C C F + HS
Sbjct: 1327 QCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCEECSSAAVSFCEFCPHSF 1386
Query: 397 --DDDDG 401
D ++G
Sbjct: 1387 CKDHEEG 1393
Score = 48 (22.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKA 152
F EG ++ + LEE + +Q S +AL K +K H KA
Sbjct: 1026 FAEGQTSINKTFKKALEEAAKRFQELKAQRESREALEIEKNSRKPPPYK-HIKA 1078
Score = 47 (21.6 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 24/115 (20%), Positives = 48/115 (41%)
Query: 62 NANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNL-RANLEEKSVM 120
N N+ ++A S G G E + +R+ R S+ T + + ++++ V
Sbjct: 552 NEKATQNISSEATS-----GPTGSVEK--KQQRRSIRTRSESEKSTEVVPKKKIKKEQVE 604
Query: 121 VTPQTSQSS---------SDDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQED 166
PQ + + SD +KR + +T+V + + A ++ D + G D
Sbjct: 605 TVPQATVKTGLQKGASEISDSCKPLKKRSRASTDVEMTSSAYRDTSDSDSRGLSD 659
Score = 44 (20.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 1178 LIDEEECRLRIK-RAHENSVTNFYMLTVTKKDRIIDAGPKGNYSRFMNHSCNPNCETQKW 1236
Query: 107 THN 109
T N
Sbjct: 1237 TVN 1239
Score = 43 (20.2 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 223 VCNPRAVVLS------KLIENNVVFPGAKVCYGGKKGRV-PLAKG--SITNGGIKCN 270
+CNPR+V L+ L + V F G+ Y +GRV P +G S G N
Sbjct: 978 ICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSIN 1034
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 138 (53.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 328 SNSHQVETYDM-CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
+N Q D C VC G+++CC+ CP +YH+ CL L P GDWFCP C
Sbjct: 54 NNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 105
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 143 (55.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 321 KGSNRMKSNSH-QVETYDMCVVCLDGGELICCDHCPCM--YHSSCLGLKDIPYGDWFCPL 377
K + R ++ + E+ D C C DGG+L+ CD C YH SCLGL P+G W CP
Sbjct: 1217 KRTRRRRTRGEGKKESEDECFRCGDGGQLVLCDRKSCTKAYHLSCLGLGKRPFGKWECPW 1276
Query: 378 CCCAICG 384
C +CG
Sbjct: 1277 HHCDVCG 1283
Score = 137 (53.3 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 26/69 (37%), Positives = 32/69 (46%)
Query: 312 VSTDNTAIVKGS-NRMKSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIP 369
V N+ I G K H C VC GG L+CC+ CP +H CL + D+P
Sbjct: 799 VIASNSIICTGHFTARKGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNI-DMP 857
Query: 370 YGDWFCPLC 378
G WFC C
Sbjct: 858 DGSWFCNDC 866
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 132 DALHSRKRRKKNTEVNLHAKAEAESMDFGNL 162
D L+ +++ + NT+ L A +++E D GN+
Sbjct: 487 DMLNEKQKARYNTKFALVASSQSEE-DSGNI 516
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 143 (55.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 321 KGSNRMKSNSH-QVETYDMCVVCLDGGELICCDHCPCM--YHSSCLGLKDIPYGDWFCPL 377
K + R ++ + E+ D C C DGG+L+ CD C YH SCLGL P+G W CP
Sbjct: 1220 KRTRRRRTRGEGKKESEDECFRCGDGGQLVLCDRKSCTKAYHLSCLGLGKRPFGKWECPW 1279
Query: 378 CCCAICG 384
C +CG
Sbjct: 1280 HHCDVCG 1286
Score = 137 (53.3 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 26/69 (37%), Positives = 32/69 (46%)
Query: 312 VSTDNTAIVKGS-NRMKSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIP 369
V N+ I G K H C VC GG L+CC+ CP +H CL + D+P
Sbjct: 802 VIASNSIICTGHFTARKGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNI-DMP 860
Query: 370 YGDWFCPLC 378
G WFC C
Sbjct: 861 DGSWFCNDC 869
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 132 DALHSRKRRKKNTEVNLHAKAEAESMDFGNL 162
D L+ +++ + NT+ L A +++E D GN+
Sbjct: 490 DMLNEKQKARYNTKFALVASSQSEE-DSGNI 519
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 142 (55.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
N V D C C DGG+L+CCD+C +H CL L +IP GDWFC C
Sbjct: 54 NKRGVINDDYCSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSC 105
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELI 450
C++C FHT C + + W C ++ S + I
Sbjct: 212 CNRCNSCFHTFCLEPPL----IYKPSYWICPKHNDYTSPSAYSSI 252
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 327 KSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
K H C VC GG L+CC+ CP +H CL + ++P G WFC C
Sbjct: 145 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNI-EMPDGSWFCNDC 196
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 141 (54.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 324 NRMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSC----LGLKDIPYGDWFCPLC 378
+R S + +D+C C +GG+L+CCDHCP +H C L + +P GDW C C
Sbjct: 44 DRSTRRSGRATNHDICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDWMCHRC 102
Score = 44 (20.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 20/105 (19%), Positives = 39/105 (37%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHEL-------IGKPFS--I 456
CD C FH C L +W C + +++ + L + F I
Sbjct: 300 CDFCPLLFHMDCLDPP---LTAFPTGRWMCPNHIQNLILNQRSLTISNRCQLFDQFQDCI 356
Query: 457 SENNLNWRLLKSLESDHQDVSNPTDGKFLKELQRKLHGAVEVMHE 501
S++ + L+ + H + T + K L K+ A++ ++
Sbjct: 357 SQHAVKLDFLQRIHRQHPPIQRSTHARSKKTL--KVPDAIKSQYQ 399
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 136 (52.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 111 CWVCHREGQVLCCELCPRVYHAKCLKLAAEPEGDWFCPECEKITVAECIETQSKAMTMLN 170
Query: 396 VD 397
++
Sbjct: 171 LE 172
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 24/44 (54%), Positives = 26/44 (59%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC DGGELICCD CP +H CL L +P G W C C
Sbjct: 425 DECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSC 468
>UNIPROTKB|F1N9E9 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00597924
Ensembl:ENSGALT00000004685 ArrayExpress:F1N9E9 Uniprot:F1N9E9
Length = 2114
Score = 134 (52.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CC+ CP +H CL + ++P G W+C C
Sbjct: 1300 RRGCRNHEHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNI-EMPEGSWYCNDC 1352
Score = 134 (52.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 312 VSTDNTAIVKGSNRMKSNSH-QV--ETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLK 366
+S + + +K +MK S +V E D C C DGG+L+ C CP +YH+ CL L
Sbjct: 1698 LSEEKSKKLKRRPQMKRRSQAEVMKEREDECFSCGDGGQLVSCKKAGCPKVYHADCLNLT 1757
Query: 367 DIPYGDWFCPLCCCAICG 384
P G W CP C +CG
Sbjct: 1758 KRPAGKWECPWHQCDMCG 1775
Score = 57 (25.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 68 NLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNLRANLEE 116
+L ++A SES GD + NH KR RF++ S ++ + E+
Sbjct: 732 DLDSEANSES-SLGDEANDVNHVAPKKRWQRFNQSSARSNKHISRSREK 779
>UNIPROTKB|B7ZL11 [details] [associations]
symbol:WHSC1L1 "Histone-lysine N-methyltransferase NSD3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AC087362 EMBL:AC087623
HOVERGEN:HBG079979 UniGene:Hs.608111 HGNC:HGNC:12767
ChiTaRS:WHSC1L1 EMBL:BC143510 IPI:IPI00980085 SMR:B7ZL11
STRING:B7ZL11 Ensembl:ENST00000527502 UCSC:uc011lbm.2
Uniprot:B7ZL11
Length = 1426
Score = 138 (53.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 28/70 (40%), Positives = 35/70 (50%)
Query: 316 NTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDW 373
N + + ++K+ Q+ D C C DGGEL+ CD CP YH CL L PYG W
Sbjct: 1291 NAKLKQKRRKIKTEPKQMHE-DYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKW 1349
Query: 374 FCPLCCCAIC 383
CP C C
Sbjct: 1350 ECPWHQCDEC 1359
Score = 49 (22.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKA 152
F EG ++ + LEE + +Q S +AL K +K H KA
Sbjct: 1026 FAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIEKNSRKPPPYK-HIKA 1078
Score = 47 (21.6 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 20/96 (20%), Positives = 41/96 (42%)
Query: 81 GDLGQEENHARHAKRACRFDEGSQNLTHNL-RANLEEKSVMVTPQTSQSS---------S 130
G G E + +R+ R S+ T + + ++++ V PQ + + S
Sbjct: 567 GSTGSVEK--KQQRRSIRTRSESEKSTEVVPKKKIKKEQVETVPQATVKTGLQKGASEIS 624
Query: 131 DDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQED 166
D +KR + +T+V + + A ++ D + G D
Sbjct: 625 DSCKPLKKRSRASTDVEMTSSAYRDTSDSDSRGLSD 660
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 223 VCNPRAVVLS------KLIENNVVFPGAKVCYGGKKGRV-PLAKG--SITNGGIKCN 270
+CNPR+V L+ L + V F G+ Y +GRV P +G S G N
Sbjct: 978 ICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSIN 1034
Score = 37 (18.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 69 LHAKAESESMD-FGDLGQEENHARHAKRACRFDEGSQNLTHN 109
L K E+ D D G + N++R +C + +Q T N
Sbjct: 1186 LRIKRAHENSDRIIDAGPKGNYSRFMNHSCNPNCETQKWTVN 1227
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 24/44 (54%), Positives = 26/44 (59%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC DGGELICCD CP +H CL L +P G W C C
Sbjct: 457 DECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSC 500
>UNIPROTKB|Q9BZ95 [details] [associations]
symbol:WHSC1L1 "Histone-lysine N-methyltransferase NSD3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0016049 "cell growth" evidence=NAS] [GO:0016571 "histone
methylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IC]
[GO:0030154 "cell differentiation" evidence=NAS] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0034968 "histone lysine methylation" evidence=IDA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0030154 GO:GO:0006355
EMBL:CH471080 GO:GO:0046872 GO:GO:0016049 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 PDB:4GNE PDB:4GNF PDB:4GNG PDBsum:4GNE PDBsum:4GNF
PDBsum:4GNG PharmGKB:PA37370 HOVERGEN:HBG079979 EMBL:AF332468
EMBL:AF332469 EMBL:AJ295990 EMBL:AJ295991 EMBL:AJ295992
EMBL:AF255649 EMBL:AK000360 EMBL:AK022560 EMBL:AK127594
EMBL:BC012059 EMBL:BC062631 EMBL:BC101717 EMBL:BC107734
EMBL:BC113469 EMBL:BC115006 IPI:IPI00307783 IPI:IPI00444331
IPI:IPI00743157 IPI:IPI00792713 RefSeq:NP_060248.2
RefSeq:NP_075447.1 UniGene:Hs.608111 PDB:2DAQ PDB:4GND PDBsum:2DAQ
PDBsum:4GND ProteinModelPortal:Q9BZ95 SMR:Q9BZ95 IntAct:Q9BZ95
STRING:Q9BZ95 PhosphoSite:Q9BZ95 DMDM:74761342 PaxDb:Q9BZ95
PRIDE:Q9BZ95 DNASU:54904 Ensembl:ENST00000316985
Ensembl:ENST00000317025 Ensembl:ENST00000433384 GeneID:54904
KEGG:hsa:54904 UCSC:uc003xli.3 UCSC:uc003xlj.3 UCSC:uc010lwe.3
CTD:54904 GeneCards:GC08M038151 HGNC:HGNC:12767 HPA:CAB013721
HPA:HPA005659 HPA:HPA018893 MIM:607083 neXtProt:NX_Q9BZ95
InParanoid:Q9BZ95 KO:K11425 OMA:MEKDIHK ChiTaRS:WHSC1L1
EvolutionaryTrace:Q9BZ95 GenomeRNAi:54904 NextBio:57940
ArrayExpress:Q9BZ95 Bgee:Q9BZ95 Genevestigator:Q9BZ95
GermOnline:ENSG00000147548 Uniprot:Q9BZ95
Length = 1437
Score = 138 (53.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 28/70 (40%), Positives = 35/70 (50%)
Query: 316 NTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDW 373
N + + ++K+ Q+ D C C DGGEL+ CD CP YH CL L PYG W
Sbjct: 1302 NAKLKQKRRKIKTEPKQMHE-DYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKW 1360
Query: 374 FCPLCCCAIC 383
CP C C
Sbjct: 1361 ECPWHQCDEC 1370
Score = 49 (22.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKA 152
F EG ++ + LEE + +Q S +AL K +K H KA
Sbjct: 1026 FAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIEKNSRKPPPYK-HIKA 1078
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 20/96 (20%), Positives = 41/96 (42%)
Query: 81 GDLGQEENHARHAKRACRFDEGSQNLTHNL-RANLEEKSVMVTPQTSQSS---------S 130
G G E + +R+ R S+ T + + ++++ V PQ + + S
Sbjct: 567 GSTGSVEK--KQQRRSIRTRSESEKSTEVVPKKKIKKEQVETVPQATVKTGLQKGASEIS 624
Query: 131 DDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQED 166
D +KR + +T+V + + A ++ D + G D
Sbjct: 625 DSCKPLKKRSRASTDVEMTSSAYRDTSDSDSRGLSD 660
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 223 VCNPRAVVLS------KLIENNVVFPGAKVCYGGKKGRV-PLAKG--SITNGGIKCN 270
+CNPR+V L+ L + V F G+ Y +GRV P +G S G N
Sbjct: 978 ICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSIN 1034
Score = 40 (19.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 1178 LIDEEECRLRIK-RAHENSVTNFYMLTVTKDRII-DAGPKGNYSRFMNHSCNPNCETQKW 1235
Query: 107 THN 109
T N
Sbjct: 1236 TVN 1238
>UNIPROTKB|F1N972 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00581947
Ensembl:ENSGALT00000004699 OMA:KYYHEEC ArrayExpress:F1N972
Uniprot:F1N972
Length = 2205
Score = 134 (52.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CC+ CP +H CL + ++P G W+C C
Sbjct: 1407 RRGCRNHEHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNI-EMPEGSWYCNDC 1459
Score = 134 (52.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 312 VSTDNTAIVKGSNRMKSNSH-QV--ETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLK 366
+S + + +K +MK S +V E D C C DGG+L+ C CP +YH+ CL L
Sbjct: 1805 LSEEKSKKLKRRPQMKRRSQAEVMKEREDECFSCGDGGQLVSCKKAGCPKVYHADCLNLT 1864
Query: 367 DIPYGDWFCPLCCCAICG 384
P G W CP C +CG
Sbjct: 1865 KRPAGKWECPWHQCDMCG 1882
Score = 57 (25.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 68 NLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNLRANLEE 116
+L ++A SES GD + NH KR RF++ S ++ + E+
Sbjct: 837 DLDSEANSES-SLGDEANDVNHVAPKKRWQRFNQSSARSNKHISRSREK 884
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 141 (54.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 273 NEVFTLTGFEVHAG------SKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNRM 326
+E+ TLTG E H S++ + + L +G+S + L H +A + G
Sbjct: 841 SELDTLTGLENHVKTEPTDISESCKQSGLSNLVNGKSPIRNLMH-----RSARIGGDGNS 895
Query: 327 KSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
K + D C VC +GG+L+CC+ CP ++H +C L P GDW C C
Sbjct: 896 KDDD---PNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 946
Score = 42 (19.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 74 ESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNLRANLEEKSVMVT 122
E E F ++E + AC +LT L NL +S + T
Sbjct: 797 EEEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDT 845
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 135 (52.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 298 LEDGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCM 357
L +G+S V L H +A + G SN D C VC +GG+L+CC+ CP +
Sbjct: 338 LVNGKSPVRSLMH-----RSARIGGDG---SNKDDDPNEDWCAVCQNGGDLLCCEKCPKV 389
Query: 358 YHSSCL--GLKDIPYGDWFCPLC 378
+H +C L P GDW C C
Sbjct: 390 FHLTCHVPTLLSFPSGDWICTFC 412
Score = 41 (19.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 17/78 (21%), Positives = 30/78 (38%)
Query: 42 RTACRSLIDEQCSQNLTLNLNANPA-VNLHAKAESESMDFGDLGQEENHARHAKRACRFD 100
R +C S + ++ +L+ ++ V E E F ++E + AC
Sbjct: 232 RGSCGS--SGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACMLS 289
Query: 101 EGSQNLTHNLRANLEEKS 118
+LT L NL +S
Sbjct: 290 SPESSLTPPLSTNLHLES 307
>RGD|1307955 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003149 "membranous septum morphogenesis" evidence=ISO]
[GO:0003289 "atrial septum primum morphogenesis" evidence=ISO]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016568 "chromatin modification" evidence=ISO]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0034968 "histone
lysine methylation" evidence=ISO] [GO:0060348 "bone development"
evidence=ISO] REFSEQ:NM_001191552 Ncbi:NP_001178481
Length = 1346
Score = 140 (54.3 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 27/66 (40%), Positives = 34/66 (51%)
Query: 321 KGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPLC 378
K R + ++ D C C DGG+L+ CD C YH SCLGL P+G W CP
Sbjct: 1205 KTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWH 1264
Query: 379 CCAICG 384
C +CG
Sbjct: 1265 HCDVCG 1270
Score = 132 (51.5 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 25/69 (36%), Positives = 32/69 (46%)
Query: 312 VSTDNTAIVKGS-NRMKSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIP 369
V N+ I G K H C VC GG L+CC+ CP +H CL + ++P
Sbjct: 786 VIASNSIICTGHFTARKGKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLSI-EMP 844
Query: 370 YGDWFCPLC 378
G WFC C
Sbjct: 845 DGSWFCNDC 853
Score = 48 (22.0 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 74 ESESMDFGDLGQEE---NHARHAKRACRF-----DEGSQNLTHNLRANLEEKSVMVTPQT 125
E ++D G + +E+ R AKR+ D G++ T A+ E K + +P
Sbjct: 361 EEAAVDPGTMREEDIPVKRRRRAKRSSSAENQEGDPGTEKSTPPKMADAEPKRGVGSPAG 420
Query: 126 SQSSSDDALHSRK 138
+ S+ A SRK
Sbjct: 421 RKRSTGSASRSRK 433
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 15/54 (27%), Positives = 20/54 (37%)
Query: 384 GDGKFKQRTLHSVDDDDGLVRTCDQ--CEHKFHTGCTRKSKRELKVKSQNKWFC 435
G+GK + D G + CD+ C +H C KR KW C
Sbjct: 1213 GEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPF-----GKWEC 1261
Score = 41 (19.5 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 134 LHSRKRRKKNTEVNLHAKAEAESMDFGN 161
L+ +++ + NT+ +L A++E D GN
Sbjct: 474 LNEKQKARYNTKFSLMISAQSEE-DSGN 500
>MGI|MGI:2142581 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1
(human)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=ISO] [GO:0032259 "methylation" evidence=IEA] [GO:0034968
"histone lysine methylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00249
SMART:SM00317 SMART:SM00570 MGI:MGI:2142581 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AC156990
HOGENOM:HOG000230893 HOVERGEN:HBG079979 CTD:54904 KO:K11425
ChiTaRS:WHSC1L1 EMBL:AK079952 EMBL:AK132725 EMBL:AK156746
EMBL:AK170040 EMBL:AC162367 EMBL:BC064447 IPI:IPI00353681
IPI:IPI00625887 IPI:IPI00974621 IPI:IPI00987793
RefSeq:NP_001001735.1 UniGene:Mm.217337 ProteinModelPortal:Q6P2L6
SMR:Q6P2L6 STRING:Q6P2L6 PhosphoSite:Q6P2L6 PaxDb:Q6P2L6
PRIDE:Q6P2L6 DNASU:234135 Ensembl:ENSMUST00000146919
Ensembl:ENSMUST00000155861 GeneID:234135 KEGG:mmu:234135
UCSC:uc009lgk.1 UCSC:uc009lgm.1 UCSC:uc009lgp.1 InParanoid:Q6P2L6
NextBio:382034 Bgee:Q6P2L6 Genevestigator:Q6P2L6
GermOnline:ENSMUSG00000054823 Uniprot:Q6P2L6
Length = 1439
Score = 139 (54.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 30/73 (41%), Positives = 38/73 (52%)
Query: 314 TDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYG 371
T N A +K ++K+ + + D C C DGGEL+ CD CP YH CL L P+G
Sbjct: 1303 TKN-AKLKKRRKVKAEAKPIHE-DYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPHG 1360
Query: 372 DWFCPLCCCAICG 384
W CP C CG
Sbjct: 1361 KWECPWHRCDECG 1373
Score = 46 (21.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEVNLHAKA 152
F EG ++ + LEE + +Q S +AL + +K H KA
Sbjct: 1029 FAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEMERTSRKPPPYK-HIKA 1081
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 1181 LIDEEECRLRIK-RAHENSVTNFYMLTVTKDRII-DAGPKGNYSRFMNHSCNPNCETQKW 1238
Query: 107 THN 109
T N
Sbjct: 1239 TVN 1241
Score = 37 (18.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 21/104 (20%), Positives = 40/104 (38%)
Query: 73 AESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNL-RANLEEKSVMVTPQTSQSS-- 129
A S G G E + +R+ R S+ + + ++++ V PQ S +
Sbjct: 559 ASSPEATSGSAGPVEK--KQQRRSIRTRSESEKSAEVVPKKKIKKEQVETAPQASLKTGL 616
Query: 130 -------SDDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQED 166
SD +KR + +T+V + ++ D + G D
Sbjct: 617 QKGASEISDSCKPLKKRSRASTDVETASCTYRDTSDSDSRGLSD 660
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 133 (51.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC +GGEL+CC+ CP ++H SC L + P G+W C C
Sbjct: 827 DWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFC 870
>UNIPROTKB|E2RNG5 [details] [associations]
symbol:LOC609728 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AAEX03010233
Ensembl:ENSCAFT00000006974 Uniprot:E2RNG5
Length = 1052
Score = 133 (51.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC +GGEL+CC+ CP ++H SC L + P G+W C C
Sbjct: 829 DWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFC 872
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 133 (51.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC +GGEL+CC+ CP ++H SC L + P G+W C C
Sbjct: 830 DWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFC 873
>RGD|1583154 [details] [associations]
symbol:LOC686349 "similar to Wolf-Hirschhorn syndrome candidate
1 protein isoform 3" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0060348 "bone development"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505 RGD:1583154
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 IPI:IPI00779496
Ensembl:ENSRNOT00000021952 OrthoDB:EOG4V6ZFW ArrayExpress:D4A9J4
Uniprot:D4A9J4
Length = 1366
Score = 140 (54.3 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 27/66 (40%), Positives = 34/66 (51%)
Query: 321 KGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPLC 378
K R + ++ D C C DGG+L+ CD C YH SCLGL P+G W CP
Sbjct: 1225 KTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWH 1284
Query: 379 CCAICG 384
C +CG
Sbjct: 1285 HCDVCG 1290
Score = 132 (51.5 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 25/69 (36%), Positives = 32/69 (46%)
Query: 312 VSTDNTAIVKGS-NRMKSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIP 369
V N+ I G K H C VC GG L+CC+ CP +H CL + ++P
Sbjct: 806 VIASNSIICTGHFTARKGKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLSI-EMP 864
Query: 370 YGDWFCPLC 378
G WFC C
Sbjct: 865 DGSWFCNDC 873
Score = 48 (22.0 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 74 ESESMDFGDLGQEE---NHARHAKRACRF-----DEGSQNLTHNLRANLEEKSVMVTPQT 125
E ++D G + +E+ R AKR+ D G++ T A+ E K + +P
Sbjct: 381 EEAAVDPGTMREEDIPVKRRRRAKRSSSAENQEGDPGTEKSTPPKMADAEPKRGVGSPAG 440
Query: 126 SQSSSDDALHSRK 138
+ S+ A SRK
Sbjct: 441 RKRSTGSASRSRK 453
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 15/54 (27%), Positives = 20/54 (37%)
Query: 384 GDGKFKQRTLHSVDDDDGLVRTCDQ--CEHKFHTGCTRKSKRELKVKSQNKWFC 435
G+GK + D G + CD+ C +H C KR KW C
Sbjct: 1233 GEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPF-----GKWEC 1281
Score = 41 (19.5 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 134 LHSRKRRKKNTEVNLHAKAEAESMDFGN 161
L+ +++ + NT+ +L A++E D GN
Sbjct: 494 LNEKQKARYNTKFSLMISAQSEE-DSGN 520
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 137 (53.3 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 332 QVETYDMCVVCLDGGE---LICCDHCPCMYHSSCL--GLKDIPYGDWFCPLCCCAICG 384
QVE Y +C+VC GG+ L+ CD C YH+ CL L D+P GDW CP C CG
Sbjct: 274 QVEQY-ICLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECG 330
Score = 48 (22.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 401 GLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFC 435
G + C+ C +H+GC K ++++ W C
Sbjct: 1153 GPMLQCELCRDAYHSGCVPGFK-DIQIGQP--WLC 1184
>ZFIN|ZDB-GENE-050324-2 [details] [associations]
symbol:whsc1l1 "Wolf-Hirschhorn syndrome candidate
1-like 1" species:7955 "Danio rerio" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-050324-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:BX294119
EMBL:CT027767 IPI:IPI00803597 Ensembl:ENSDART00000091115
Bgee:F1QV68 Uniprot:F1QV68
Length = 1521
Score = 143 (55.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 316 NTAIVKGSNRMKSNSHQV-ETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGD 372
N + ++K+ S Q E Y C C +GGEL+ CD CP YH CL L PYG
Sbjct: 1374 NAKLKPKKRKLKTESKQTHELY--CYCCGEGGELVMCDKKDCPKAYHLLCLNLSKPPYGR 1431
Query: 373 WFCPLCCCAIC 383
W CP C++C
Sbjct: 1432 WECPWHQCSVC 1442
Score = 42 (19.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 15/67 (22%), Positives = 27/67 (40%)
Query: 87 ENHARHAKRACRFDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKKNTEV 146
E+ R + R + EGS N + EE+ S A S +R+++ V
Sbjct: 634 ESEERPSSRV-KSPEGSSNKAEAETCSSEEERAASPSGWSDQEHTSAEQSTERKQQRRSV 692
Query: 147 NLHAKAE 153
+++E
Sbjct: 693 RSRSESE 699
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 130 SDDALHSRKRRKKNTEVNLHAKAEAESMDFGNLGQED 166
SD +KR + +T+V + + ++ D + G D
Sbjct: 735 SDSCKPLKKRSRASTDVEMASSLYRDTSDSDSRGLND 771
Score = 38 (18.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 9/44 (20%), Positives = 18/44 (40%)
Query: 99 FDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRKK 142
F EG + + LEE + +Q + +AL + ++
Sbjct: 1098 FAEGQVGINKTFKKALEEAAKRFQELKAQRETKEALEQERNSRR 1141
>UNIPROTKB|F1MMY4 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV
EMBL:DAAA02018575 IPI:IPI00714897 Ensembl:ENSBTAT00000010497
Uniprot:F1MMY4
Length = 1368
Score = 135 (52.6 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 26/66 (39%), Positives = 32/66 (48%)
Query: 321 KGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCM--YHSSCLGLKDIPYGDWFCPLC 378
K R + + D C C DGG+L+ CD C YH CLGL P+G W CP
Sbjct: 1227 KARRRRTKGEGKKPSEDECFRCGDGGQLVLCDRKSCTKAYHLPCLGLGKRPFGKWECPWH 1286
Query: 379 CCAICG 384
C +CG
Sbjct: 1287 HCDVCG 1292
Score = 129 (50.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 327 KSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
K H C VC GG L+CC+ CP +H CL + ++P G WFC C
Sbjct: 824 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLSI-EMPDGSWFCNDC 875
Score = 49 (22.3 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 73 AESESMDFGDLGQEENHARHAKRACR-FDE--GSQ-N-LTHNLRANLEEKSVMVTPQTSQ 127
A S+ + F ++E A H + +E SQ N L +A K +V P S+
Sbjct: 459 AASQFLVFCQKHRDEVVAEHPDASAEEIEELLASQWNMLNEKQKARYHTKFALVAPPQSE 518
Query: 128 SSSDDALHSRKRRKKNTEVNLHAKAEAE 155
S + L+ +KR L AE E
Sbjct: 519 EDSGN-LNGKKRSHTKRTQGLRGDAEVE 545
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 143 (55.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC +GGELICCD CP ++H SC L P G+W+C LC
Sbjct: 698 DWCAVCQNGGELICCDKCPKVFHLSCHVPSLTASPSGEWYCTLC 741
Score = 37 (18.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 29 RYTSPNQKTFY 39
R+ SPNQ T+Y
Sbjct: 451 RHHSPNQWTWY 461
>RGD|1306330 [details] [associations]
symbol:Ing1 "inhibitor of growth family, member 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010941 "regulation of cell death" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1306330 GO:GO:0005634 GO:GO:0045893 GO:GO:0010941
GO:GO:0046872 GO:GO:0008270 GO:GO:0006606 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:BC086336 IPI:IPI00365368
UniGene:Rn.145491 UniGene:Rn.232052 ProteinModelPortal:Q5RK29
STRING:Q5RK29 UCSC:RGD:1306330 InParanoid:Q5RK29
ArrayExpress:Q5RK29 Genevestigator:Q5RK29 Uniprot:Q5RK29
Length = 102
Score = 104 (41.7 bits), Expect = 0.00010, P = 0.00010
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 335 TYDMCVVCLDGGELICCDH--CPC-MYHSSCLGLKDIPYGDWFCPLC 378
TY +C + GE+I CD+ CP +H SC+GL P G W+CP C
Sbjct: 34 TYCLCNQ-VSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKC 79
>UNIPROTKB|F1NME8 [details] [associations]
symbol:Gga.29865 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:AADN02019301
IPI:IPI00581329 Ensembl:ENSGALT00000007232 Uniprot:F1NME8
Length = 1197
Score = 135 (52.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
C VC G+++CC+ CP +YH+ CL L P GDWFCP C
Sbjct: 109 CWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPEC 148
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 445 SLHELIGKPFSISENNLNWRLLKSLESDH 473
S H GK F N NW S+ SDH
Sbjct: 1150 SYHSCSGKSFCWDSGNENW---SSVCSDH 1175
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 466 LKSLESDHQDVSNPTDGKFLKELQRKLHGAVEVMHECFEPAKEPLTGRD 514
LKS + + +P K + + +++ + + PAKE L G+D
Sbjct: 663 LKSTSPEVEKTDDPVKEKAITDTEKEFSEKGKGLQH---PAKEKLKGKD 708
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 129 (50.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 329 NSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
+ ++ + D C VC GGE+I CD CP YH CL L+ P G W CP C
Sbjct: 376 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHC 427
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/76 (21%), Positives = 34/76 (44%)
Query: 76 ESMDFGDLGQEENHARHAKRACRFD---EGS---QNLTHNLRANLEEKSVMVTPQTSQSS 129
E+ D +LG+++ + K + D EG + +++E S S S+
Sbjct: 63 EASDRDNLGKKKRGPKKKKETKKKDKEKEGKIAKARKRKKIESDIERDSEPDYAMNSDSA 122
Query: 130 SDDALHSRKRRKKNTE 145
+ D +K++KK+ +
Sbjct: 123 ASDYGGEKKKKKKHKD 138
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC +GGEL+CC+ CP ++H +C L + P G+W C C
Sbjct: 828 DWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFC 871
>WB|WBGene00018013 [details] [associations]
symbol:phf-10 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00530000063194
OMA:CETSSQD EMBL:FO081281 GeneID:3565141 KEGG:cel:CELE_F33E11.6
UCSC:F33E11.6b CTD:3565141 NextBio:955339 RefSeq:NP_001041113.1
ProteinModelPortal:Q2A950 SMR:Q2A950 STRING:Q2A950
EnsemblMetazoa:F33E11.6b WormBase:F33E11.6b InParanoid:Q2A950
ArrayExpress:Q2A950 Uniprot:Q2A950
Length = 447
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 33/108 (30%), Positives = 46/108 (42%)
Query: 339 CVVC-LDGGELICCDHCPCMYHSSCLGLKD-----IPYGDWFCPLC-CCAICGDGKFKQR 391
C C GGE+ICC C YH C+ + + + +W C C C+IC
Sbjct: 335 CDSCEKTGGEMICCATCKIAYHPQCIEMPERMAALVKTYEWSCVDCRLCSIC-------- 386
Query: 392 TLHSVDDDDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQNKWFCSDRC 439
+ + +D +V CD+C+ FHT C LK Q W C C
Sbjct: 387 --NKPEKEDEIV-FCDRCDRGFHTYCVG-----LKKLPQGTWICDTYC 426
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 138 (53.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 131 CWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKITVAECIETQSKAMTMLT 190
Query: 396 VD 397
++
Sbjct: 191 IE 192
Score = 41 (19.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 116 EKSVMVTPQTSQ---SSSDDALHSRKRRKKNTEVNLHAKAEAE 155
+K +PQ S S D + K++KK +N + K ++E
Sbjct: 58 QKRRFPSPQHSSNGHSPQDSSTSPSKKKKKPIMINSNNKEQSE 100
>ZFIN|ZDB-GENE-041119-1 [details] [associations]
symbol:zmynd8 "zinc finger, MYND-type containing 8"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
ZFIN:ZDB-GENE-041119-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX296530 IPI:IPI00512740
Ensembl:ENSDART00000040235 Bgee:E7FBQ3 Uniprot:E7FBQ3
Length = 1201
Score = 140 (54.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 339 CVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC---CCAICGDGKFKQRTLHS 395
C VC G+++CC+ CP +YH+ CL L P GDWFCP C A C + + K T+ +
Sbjct: 112 CWVCHREGQVLCCELCPRVYHAKCLKLAAEPEGDWFCPECEKITVAECIETQSKAMTMLT 171
Query: 396 VD 397
+D
Sbjct: 172 LD 173
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 633 QGTIMCQKFLMKTPSASP 650
Q T++ MK PS SP
Sbjct: 794 QNTVLSSSPTMKDPSQSP 811
>ZFIN|ZDB-GENE-080519-3 [details] [associations]
symbol:nsd1a "nuclear receptor binding SET domain
protein 1a" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-080519-3 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 KO:K15588
EMBL:CU633762 EMBL:CU655965 EMBL:CU659412 IPI:IPI00512787
RefSeq:XP_683890.4 UniGene:Dr.83733 Ensembl:ENSDART00000084114
GeneID:556086 KEGG:dre:556086 CTD:556086 NextBio:20881309
ArrayExpress:F1QA79 Bgee:F1QA79 Uniprot:F1QA79
Length = 2055
Score = 137 (53.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CC+ CP +H CL + ++P G WFC C
Sbjct: 1379 RKGCKNHEHINVSWCFVCSEGGSLLCCESCPAAFHRECLNI-EMPQGSWFCNDC 1431
Score = 134 (52.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 28/67 (41%), Positives = 34/67 (50%)
Query: 321 KGSNRMKSNSHQV-ETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPL 377
K S + KS S E D C C DGG+++ C CP +YH+ CL L P G W CP
Sbjct: 1784 KVSGKRKSQSEVTKEREDECFYCGDGGQIVSCKKPGCPKVYHADCLNLSKRPAGRWECPW 1843
Query: 378 CCCAICG 384
C CG
Sbjct: 1844 HQCNECG 1850
Score = 47 (21.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 115 EEKSVMVTPQT-SQSSSDDALHSRKRRKKNTEVNLHAKAEAESMD 158
+EK + P + S SS + + + K+N EV ++++ ES+D
Sbjct: 623 KEKDLSHEPNSHSPSSEHSSQTNHELSKQNWEVKNNSESSEESVD 667
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 136 (52.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 35/114 (30%), Positives = 54/114 (47%)
Query: 273 NEVFTLTGFEVHAG------SKNHRPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNRM 326
+E+ TLT E H S++ + + L +G+S + L H +A + G
Sbjct: 843 SELDTLTSLENHVKTEPADISESCKQSGLSSLVNGKSPIRNLMH-----RSARIGGDGNS 897
Query: 327 KSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
K + D C VC +GG+L+CC+ CP ++H +C L P GDW C C
Sbjct: 898 KDDD---PNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 948
Score = 42 (19.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 74 ESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNLRANLEEKSVMVT 122
E E F ++E + AC +LT L NL +S + T
Sbjct: 799 EEEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDT 847
>ZFIN|ZDB-GENE-030131-2581 [details] [associations]
symbol:whsc1 "Wolf-Hirschhorn syndrome candidate
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0010452
"histone H3-K36 methylation" evidence=IMP] [GO:0048706 "embryonic
skeletal system development" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2581
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0051216
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0048706 SMART:SM00293 EMBL:CR556722 KO:K11424 GO:GO:0010452
CTD:7468 EMBL:CT573111 IPI:IPI00492725 RefSeq:NP_001076020.1
UniGene:Dr.78031 Ensembl:ENSDART00000009499 GeneID:100000709
KEGG:dre:100000709 HOVERGEN:HBG106834 OMA:FESECLN NextBio:20784754
Uniprot:B8JIA4
Length = 1461
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 321 KGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPLC 378
K R ++ + ++ D C C DGG+L+ CD C YH SCL P+G W CP
Sbjct: 1312 KKPKRKRARNEGKKSEDECFRCGDGGQLVLCDKKGCTKAYHLSCLDRTKRPFGRWDCPWH 1371
Query: 379 CCAICG 384
C +CG
Sbjct: 1372 HCDVCG 1377
Score = 129 (50.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 311 MVSTDNTAIVKGSNRMKSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIP 369
M+S+ K SH C +C GG L+CC+ CP +H CL + +P
Sbjct: 897 MISSSAIVCTNHFRAKKGYSHHSHVNVSWCFICSKGGRLLCCESCPAAFHPDCLNIA-MP 955
Query: 370 YGDWFCPLC 378
G WFC C
Sbjct: 956 DGSWFCNDC 964
Score = 47 (21.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 399 DDGLVRTCDQ--CEHKFHTGCTRKSKRELKVKSQNKWFC 435
D G + CD+ C +H C ++KR +W C
Sbjct: 1335 DGGQLVLCDKKGCTKAYHLSCLDRTKRPF-----GRWDC 1368
>MGI|MGI:1276574 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1 (human)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003149 "membranous septum morphogenesis" evidence=IMP]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IMP]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=IDA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IEA] [GO:0034968 "histone lysine
methylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060348 "bone development" evidence=IMP]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 MGI:MGI:1276574 Pfam:PF00855 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0031965 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 KO:K11424
UniGene:Mm.332320 HSSP:Q9BYU8 CTD:7468 OMA:DVKRCVV ChiTaRS:WHSC1
EMBL:EU733655 EMBL:AK129287 EMBL:AC163329 EMBL:AK078622
EMBL:BC046473 EMBL:BC053454 IPI:IPI00107975 IPI:IPI00671804
IPI:IPI00762411 IPI:IPI00902751 RefSeq:NP_001074571.2
RefSeq:NP_780440.2 UniGene:Mm.19892 UniGene:Mm.490310
ProteinModelPortal:Q8BVE8 SMR:Q8BVE8 STRING:Q8BVE8
PhosphoSite:Q8BVE8 PaxDb:Q8BVE8 PRIDE:Q8BVE8
Ensembl:ENSMUST00000058096 Ensembl:ENSMUST00000066854
Ensembl:ENSMUST00000075812 GeneID:107823 KEGG:mmu:107823
UCSC:uc008xbm.2 UCSC:uc012duw.1 HOGENOM:HOG000230893
HOVERGEN:HBG079979 NextBio:359529 Bgee:Q8BVE8 CleanEx:MM_WHSC1
Genevestigator:Q8BVE8 GermOnline:ENSMUSG00000057406 Uniprot:Q8BVE8
Length = 1365
Score = 140 (54.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 27/66 (40%), Positives = 34/66 (51%)
Query: 321 KGSNRMKSNSHQVETYDMCVVCLDGGELICCDH--CPCMYHSSCLGLKDIPYGDWFCPLC 378
K R + ++ D C C DGG+L+ CD C YH SCLGL P+G W CP
Sbjct: 1224 KTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWH 1283
Query: 379 CCAICG 384
C +CG
Sbjct: 1284 HCDVCG 1289
Score = 132 (51.5 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 25/69 (36%), Positives = 32/69 (46%)
Query: 312 VSTDNTAIVKGS-NRMKSNSHQVET-YDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIP 369
V N+ I G K H C VC GG L+CC+ CP +H CL + ++P
Sbjct: 805 VIASNSIICTGHFTARKGKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLNI-EMP 863
Query: 370 YGDWFCPLC 378
G WFC C
Sbjct: 864 DGSWFCNDC 872
Score = 46 (21.3 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 15/54 (27%), Positives = 20/54 (37%)
Query: 384 GDGKFKQRTLHSVDDDDGLVRTCDQ--CEHKFHTGCTRKSKRELKVKSQNKWFC 435
G+GK + D G + CD+ C +H C KR KW C
Sbjct: 1232 GEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPF-----GKWEC 1280
Score = 43 (20.2 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 67 VNLHAKAESESMDFGDLGQEE---NHARHAKRACRF-----DEGSQNLTHNLRANLEEKS 118
V+ +E ++D G + +E+ R KR+ D G+ T A E K
Sbjct: 374 VDSSGASEEAAVDPGSVREEDIPTKRRRRTKRSSSAENQEGDPGTDKSTPPKMAEAEPKR 433
Query: 119 VMVTPQTSQSSSDDALHSRK 138
+ +P + S+ A SRK
Sbjct: 434 GVGSPAGRKKSTGSAPRSRK 453
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 134 LHSRKRRKKNTEVNLHAKAEAESMDFGN 161
L+ +++ + NT+ +L A++E D GN
Sbjct: 494 LNEKQKARYNTKFSLMISAQSEE-DSGN 520
>UNIPROTKB|I3LD78 [details] [associations]
symbol:I3LD78 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000022292 OMA:HCLELED
Uniprot:I3LD78
Length = 948
Score = 135 (52.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 298 LEDGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCM 357
L +G+S V L H +A + G SN D C VC +GG+L+CC+ CP +
Sbjct: 678 LVNGKSPVRSLMH-----RSARIGGDG---SNKDDDPNEDWCAVCQNGGDLLCCEKCPKV 729
Query: 358 YHSSCL--GLKDIPYGDWFCPLC 378
+H +C L P GDW C C
Sbjct: 730 FHLTCHVPTLLSFPSGDWICTFC 752
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/78 (21%), Positives = 30/78 (38%)
Query: 42 RTACRSLIDEQCSQNLTLNLNANPA-VNLHAKAESESMDFGDLGQEENHARHAKRACRFD 100
R +C S + ++ +L+ ++ V E E F ++E + AC
Sbjct: 572 RGSCGS--SGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACMLS 629
Query: 101 EGSQNLTHNLRANLEEKS 118
+LT L NL +S
Sbjct: 630 SPESSLTPPLSTNLHLES 647
>UNIPROTKB|Q96L73 [details] [associations]
symbol:NSD1 "Histone-lysine N-methyltransferase, H3
lysine-36 and H4 lysine-20 specific" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0016571 "histone methylation" evidence=ISS] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISS]
[GO:0042799 "histone methyltransferase activity (H4-K20 specific)"
evidence=ISS] [GO:0042974 "retinoic acid receptor binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISS] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISS;IDA] [GO:0050681 "androgen receptor
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0030331 "estrogen receptor binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0010452 "histone H3-K36 methylation" evidence=ISS;IDA]
[GO:0034770 "histone H4-K20 methylation" evidence=ISS]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0003714 GO:GO:0005694
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0050681 GO:GO:0030331
GO:GO:0046966 eggNOG:COG2940 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0016922 GO:GO:0046965 SMART:SM00293 GO:GO:0046975 MIM:130650
Orphanet:3447 Orphanet:821 EMBL:AF380302 EMBL:AY049721
EMBL:AF395588 EMBL:AF322907 IPI:IPI00102107 IPI:IPI00173901
IPI:IPI00332367 RefSeq:NP_071900.2 RefSeq:NP_758859.1
UniGene:Hs.106861 PDB:3OOI PDBsum:3OOI ProteinModelPortal:Q96L73
SMR:Q96L73 DIP:DIP-58517N IntAct:Q96L73 STRING:Q96L73
PhosphoSite:Q96L73 DMDM:32469769 PaxDb:Q96L73 PRIDE:Q96L73
Ensembl:ENST00000347982 Ensembl:ENST00000354179
Ensembl:ENST00000361032 Ensembl:ENST00000439151 GeneID:64324
KEGG:hsa:64324 UCSC:uc003mfr.4 UCSC:uc003mfs.1 UCSC:uc003mft.4
CTD:64324 GeneCards:GC05P176560 HGNC:HGNC:14234 MIM:117550
MIM:277590 MIM:606681 neXtProt:NX_Q96L73 Orphanet:228415
Orphanet:238613 PharmGKB:PA31790 HOGENOM:HOG000113857
HOVERGEN:HBG007518 InParanoid:Q96L73 KO:K15588 OMA:NIDKMRH
OrthoDB:EOG49GKFN PhylomeDB:Q96L73 ChiTaRS:NSD1 GenomeRNAi:64324
NextBio:66241 ArrayExpress:Q96L73 Bgee:Q96L73 CleanEx:HS_NSD1
Genevestigator:Q96L73 GermOnline:ENSG00000165671 Uniprot:Q96L73
Length = 2696
Score = 146 (56.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CCD CP +H CL + DIP G+W+C C
Sbjct: 1696 RRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1748
Score = 48 (22.0 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 192 SRDDQKKSAVKHTHVRISG-KQERQKVLP 219
S D+ K+++VK H++ K ER+ +P
Sbjct: 502 SSDNPKRTSVKKGHIQFEAHKDERRGKIP 530
Score = 40 (19.1 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 299 EDGRSLVDCLRHMVSTDNTAI 319
+DG S +D + H +DN+ +
Sbjct: 643 DDGSSDLDPIEHSSESDNSVL 663
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 84 GQEENHARHAKRACRFDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKRRK 141
G EE + D+GS +L ++ + SV+ P + ++ L +K K
Sbjct: 627 GDEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEIPDAFDRT-ENMLSMQKNEK 683
Score = 37 (18.1 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 118 SVMVTPQTSQSSSDDALHSRKRRKKNT 144
+++ P TS SS+ L + +KK+T
Sbjct: 291 NMLELPGTSSSSTSQELPFCQPKKKST 317
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 114 (45.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/59 (38%), Positives = 28/59 (47%)
Query: 325 RMKSNSH-QVETYDMCVVCLDGGELICCDHCPCMYHSSCLGL----KDIPYGDWFCPLC 378
R K+NS E D C C G +CCD CP +H CL ++P GDW C C
Sbjct: 248 RDKNNSTIDFENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNEC 306
Score = 59 (25.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 398 DDDGLVRTCDQCEHKFHTGCT-RKSKRELKVKSQNKWFCSDRCE-HVFSSLHELIGKPFS 455
++ L+ TCD C+ +H C R S + L +KW C V+ +H
Sbjct: 432 ENSRLIMTCDYCQTPWHLDCVPRASFKNLG----SKWKCPLHSPTKVYKKIHHCQ----- 482
Query: 456 ISENNLNWRLLK 467
+N++N+++ K
Sbjct: 483 -EDNSVNYKVWK 493
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 135 (52.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 36/114 (31%), Positives = 54/114 (47%)
Query: 273 NEVFTLTGFEVHAGSK----NH--RPAANIFLEDGRSLVDCLRHMVSTDNTAIVKGSNRM 326
+E+ TLT E H ++ N + + L +G+S V L H +A + G
Sbjct: 825 SELDTLTSLENHVKTEPADMNESCKQSGLNSLVNGKSPVRSLMH-----RSARIGGDGSS 879
Query: 327 KSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
K + D C VC +GG+L+CC+ CP ++H +C L P GDW C C
Sbjct: 880 KDDD---PNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 930
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 74 ESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNLRANLEEKSVMVT 122
E E F ++E + AC +LT L NL +S + T
Sbjct: 781 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDT 829
>UNIPROTKB|E1C765 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0060348 "bone
development" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AADN02014946 IPI:IPI00588925 Ensembl:ENSGALT00000025327
Uniprot:E1C765
Length = 1372
Score = 131 (51.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 311 MVSTDNTAIVKGSNRMKSNSHQVET-YDMCVVCL-DGGELICCDHCPCMYHSSCLGLKDI 368
++++++ MK SH C VC +GG L+CC+ CP +H CL + ++
Sbjct: 810 VIASNSIVCTNHFTAMKGKSHHAHVNVSWCFVCSKEGGSLLCCESCPAAFHPDCLNI-EM 868
Query: 369 PYGDWFCPLC 378
P G W+C C
Sbjct: 869 PDGSWYCNDC 878
Score = 130 (50.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 27/64 (42%), Positives = 33/64 (51%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCM--YHSSCLGLKDIPY--GDWFCPLCCC 380
R N + E+ D C C DGG+L+ CD C YH SCL L P+ G W CP C
Sbjct: 1234 RRTKNEGKKESEDDCFRCGDGGQLVLCDRKSCTKAYHLSCLDLAKRPFVIGKWECPWHHC 1293
Query: 381 AICG 384
+CG
Sbjct: 1294 DVCG 1297
Score = 48 (22.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 106 LTHNLRANLEEKSVMVTPQTSQSSSDDALHSRKR-RKKNTE 145
L+ +A K +VT S+ S + LH KR +KK T+
Sbjct: 499 LSEKQKARYNTKFAIVTSPKSEEDSGN-LHGNKRNQKKRTK 538
>UNIPROTKB|I3LBT0 [details] [associations]
symbol:I3LBT0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000029002
Uniprot:I3LBT0
Length = 945
Score = 135 (52.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 298 LEDGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCM 357
L +G+S V L H +A + G SN D C VC +GG+L+CC+ CP +
Sbjct: 675 LVNGKSPVRSLMH-----RSARIGGDG---SNKDDDPNEDWCAVCQNGGDLLCCEKCPKV 726
Query: 358 YHSSCL--GLKDIPYGDWFCPLC 378
+H +C L P GDW C C
Sbjct: 727 FHLTCHVPTLLSFPSGDWICTFC 749
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 74 ESESMDFGDLGQEENHARHAKRACRFDEGSQNLTHNLRANLEEKS 118
E E F ++E + AC +LT L NL +S
Sbjct: 600 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLES 644
>ZFIN|ZDB-GENE-030131-6456 [details] [associations]
symbol:phf21ab "PHD finger protein 21Ab"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060324
"face development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
ZFIN:ZDB-GENE-030131-6456 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060324
GeneTree:ENSGT00530000063984 EMBL:BX088562 IPI:IPI00499307
UniGene:Dr.80349 Ensembl:ENSDART00000021577 NextBio:20885937
Bgee:E7F750 Uniprot:E7F750
Length = 796
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK+IP G W CP C
Sbjct: 462 DFCTVCRRSGQLLMCDTCSRVYHLDCLDPPLKNIPKGMWICPKC 505
>UNIPROTKB|F1S3C1 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:NIDKMRH
EMBL:CU915382 Ensembl:ENSSSCT00000015341 Uniprot:F1S3C1
Length = 2394
Score = 146 (56.5 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CCD CP +H CL + DIP G+W+C C
Sbjct: 1393 RRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1445
Score = 46 (21.3 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 399 DDGLVRTCDQ--CEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELIGKPF 454
D G + +C + C +H C +KR K + W D C +S E+ F
Sbjct: 1823 DAGQLVSCKKPGCPKVYHADCLNLTKRPAG-KWECPWHQCDICGKEAASFCEMCPSSF 1879
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 299 EDGRSLVDCLRHMVSTDNTAI 319
+DG S +D + H +DN+ +
Sbjct: 334 DDGSSDLDPIDHSSESDNSVL 354
>UNIPROTKB|E2R3Q9 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 CTD:64324
KO:K15588 OMA:NIDKMRH EMBL:AAEX03002967 EMBL:AAEX03002968
EMBL:AAEX03002969 EMBL:AAEX03002970 RefSeq:XP_865778.1
Ensembl:ENSCAFT00000026110 GeneID:489094 KEGG:cfa:489094
Uniprot:E2R3Q9
Length = 2698
Score = 146 (56.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CCD CP +H CL + DIP G+W+C C
Sbjct: 1697 RRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1749
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 188 NSMTSRDDQKKSAVKHTHVRISGKQERQKVLPRFSV--CNPRAVVL 231
N S + + AVK + ++ + E QK R V N +A +L
Sbjct: 209 NEQDSTPESRHGAVKSPFLPLAPQTETQKNKQRNEVDGSNEKAALL 254
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 118 SVMVTPQTSQSSSDDALHSRKRRKKNT 144
+++ P TS SS+ L + +KK+T
Sbjct: 291 NMLELPGTSSSSTSQELPFCQPKKKST 317
>UNIPROTKB|J9NVX7 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002967
EMBL:AAEX03002968 EMBL:AAEX03002969 EMBL:AAEX03002970
Ensembl:ENSCAFT00000045272 Uniprot:J9NVX7
Length = 2429
Score = 146 (56.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CCD CP +H CL + DIP G+W+C C
Sbjct: 1428 RRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1480
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 118 SVMVTPQTSQSSSDDALHSRKRRKKNT 144
+++ P TS SS+ L + +KK+T
Sbjct: 22 NMLELPGTSSSSTSQELPFCQPKKKST 48
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 129 (50.5 bits), Expect = 0.00035, P = 0.00035
Identities = 41/154 (26%), Positives = 61/154 (39%)
Query: 321 KGSNRMKSNSHQVET--YDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCP 376
+ S R + VE + C VC GEL+ CD C YH +C+ ++ P GDW CP
Sbjct: 248 RASKRARKEQGVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCP 307
Query: 377 LC-----CCAICGDGKFKQRTLHS-VDDDDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQ 430
C I + K + + + + CD C +H C E+ +
Sbjct: 308 HCEEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIP---E 364
Query: 431 NKWFCSDRCEHVFSSLHELIGKPFSISENNLNWR 464
+W C RC +I +P E L+WR
Sbjct: 365 GEWSCP-RC---------IIPEPAQRIEKILSWR 388
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 129 (50.5 bits), Expect = 0.00035, P = 0.00035
Identities = 41/154 (26%), Positives = 61/154 (39%)
Query: 321 KGSNRMKSNSHQVET--YDMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCP 376
+ S R + VE + C VC GEL+ CD C YH +C+ ++ P GDW CP
Sbjct: 248 RASKRARKEQGVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCP 307
Query: 377 LC-----CCAICGDGKFKQRTLHS-VDDDDGLVRTCDQCEHKFHTGCTRKSKRELKVKSQ 430
C I + K + + + + CD C +H C E+ +
Sbjct: 308 HCEEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIP---E 364
Query: 431 NKWFCSDRCEHVFSSLHELIGKPFSISENNLNWR 464
+W C RC +I +P E L+WR
Sbjct: 365 GEWSCP-RC---------IIPEPAQRIEKILSWR 388
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 123 (48.4 bits), Expect = 0.00038, P = 0.00038
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 369 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 412
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 413 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKC 456
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 132 (51.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 298 LEDGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCM 357
L +G+S + L H +A + G K + D C VC +GG+L+CC+ CP +
Sbjct: 489 LVNGKSPIRSLMH-----RSARIGGDGNNKDDD---PNEDWCAVCQNGGDLLCCEKCPKV 540
Query: 358 YHSSCL--GLKDIPYGDWFCPLC 378
+H +C L P GDW C C
Sbjct: 541 FHLTCHVPTLLSFPSGDWICTFC 563
Score = 39 (18.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/79 (24%), Positives = 32/79 (40%)
Query: 42 RTACRSLIDEQCSQNLTLNLNANPA-VNLHAKAESESMDF-GDLGQEENHARHAKRACRF 99
R +C S + ++ +L+ ++ V E E F G + QE+ + AC
Sbjct: 383 RGSCGS--SGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGGVKQEKTEDGR-RSACML 439
Query: 100 DEGSQNLTHNLRANLEEKS 118
+LT L NL +S
Sbjct: 440 SSPESSLTPPLSTNLHLES 458
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 123 (48.4 bits), Expect = 0.00045, P = 0.00045
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 437 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 480
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 123 (48.4 bits), Expect = 0.00047, P = 0.00047
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 461 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKC 504
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 333 VETYDMCVVCLDGGELICCDHCPCMYHSSCLGL----KDIPYGDWFCPLC 378
+ D C C G ICC+ CPC +H SCL ++IP G WFC C
Sbjct: 114 IRNVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTC 163
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 123 (48.4 bits), Expect = 0.00049, P = 0.00049
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 489 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 123 (48.4 bits), Expect = 0.00049, P = 0.00049
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 489 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 122 (48.0 bits), Expect = 0.00050, P = 0.00050
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 383 DFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 426
>UNIPROTKB|E1BM66 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:NIDKMRH EMBL:DAAA02020051 EMBL:DAAA02020048
EMBL:DAAA02020049 EMBL:DAAA02020050 IPI:IPI00716946
Ensembl:ENSBTAT00000034204 Uniprot:E1BM66
Length = 2698
Score = 146 (56.5 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CCD CP +H CL + DIP G+W+C C
Sbjct: 1699 RRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1751
Score = 46 (21.3 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 399 DDGLVRTCDQ--CEHKFHTGCTRKSKRELKVKSQNKWFCSDRCEHVFSSLHELIGKPF 454
D G + +C + C +H C +KR K + W D C +S E+ F
Sbjct: 2129 DAGQLVSCKKPGCPKVYHADCLNLTKRPAG-KWECPWHQCDICGKEAASFCEMCPSSF 2185
Score = 37 (18.1 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 299 EDGRSLVDCLRHMVSTDNTAI 319
+DG S +D + H +DN+ +
Sbjct: 643 DDGSSDLDPVDHSSESDNSVL 663
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 126 (49.4 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 321 KGSNRMKSNSHQVETYDMCVVCLDGGE---LICCDHCPCMYHSSCL--GLKDIPYGDWFC 375
K +R K + V+ Y +C++C G + L+ CD C YH+ CL L D+P GDW C
Sbjct: 297 KPKSRAKKTATAVDLY-VCLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGDWRC 355
Query: 376 PLCCCAIC 383
P C C
Sbjct: 356 PKCLAQEC 363
Score = 51 (23.0 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 406 CDQCEHKFHTGCTRKSKRELKVKSQNKWFC 435
C+ C FHT C S +S W C
Sbjct: 1194 CELCRDAFHTSCVAVSSIS---QSSRIWLC 1220
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 122 (48.0 bits), Expect = 0.00058, P = 0.00058
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 449 DFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 492
>UNIPROTKB|F1P5H8 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 OMA:PIRSLMH EMBL:AADN02045019
IPI:IPI00589805 Ensembl:ENSGALT00000003070 Uniprot:F1P5H8
Length = 947
Score = 129 (50.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCL--GLKDIPYGDWFCPLC 378
D C VC +GG+L+CC+ CP ++H +C L P GDW C C
Sbjct: 725 DWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 768
Score = 43 (20.2 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 17/78 (21%), Positives = 30/78 (38%)
Query: 42 RTACRSLIDEQCSQNLTLNLNANPA-VNLHAKAESESMDFGDLGQEENHARHAKRACRFD 100
R +C S + ++ ++N ++ V E E F ++E + AC
Sbjct: 589 RGSCGS--SGRTAEKTSVNFKSDQVKVKQEPGTEEEICSFSGAVKQEKTEDGRRSACMLS 646
Query: 101 EGSQNLTHNLRANLEEKS 118
+LT L NL +S
Sbjct: 647 SPESSLTPPLSTNLHLES 664
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 337 DMCVVCLDGGELICCDHCPCMYHSSCLG--LKDIPYGDWFCPLC 378
D C VC G+L+ CD C +YH CL LK IP G W CP C
Sbjct: 469 DFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 512
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 132 (51.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 298 LEDGRSLVDCLRHMVSTDNTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCM 357
L +G+S + L H +A + G K + D C VC +GG+L+CC+ CP +
Sbjct: 618 LVNGKSPIRSLMH-----RSARIGGDGNNKDDD---PNEDWCAVCQNGGDLLCCEKCPKV 669
Query: 358 YHSSCL--GLKDIPYGDWFCPLC 378
+H +C L P GDW C C
Sbjct: 670 FHLTCHVPTLLSFPSGDWICTFC 692
Score = 39 (18.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 19/79 (24%), Positives = 32/79 (40%)
Query: 42 RTACRSLIDEQCSQNLTLNLNANPA-VNLHAKAESESMDF-GDLGQEENHARHAKRACRF 99
R +C S + ++ +L+ ++ V E E F G + QE+ + AC
Sbjct: 512 RGSCGS--SGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGGVKQEKTEDGR-RSACML 568
Query: 100 DEGSQNLTHNLRANLEEKS 118
+LT L NL +S
Sbjct: 569 SSPESSLTPPLSTNLHLES 587
>UNIPROTKB|Q7ZX31 [details] [associations]
symbol:ing3 "Inhibitor of growth protein 3" species:8355
"Xenopus laevis" [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043967 "histone H4 acetylation"
evidence=ISS] [GO:0043968 "histone H2A acetylation" evidence=ISS]
[GO:0004402 "histone acetyltransferase activity" evidence=ISS]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0043065 GO:GO:0043968
GO:GO:0043967 GO:GO:0040008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR024610 Pfam:PF12998 HOVERGEN:HBG006607
HSSP:Q9NXR8 CTD:54556 KO:K11319 EMBL:BC045263 RefSeq:NP_001080280.1
UniGene:Xl.4898 ProteinModelPortal:Q7ZX31 SMR:Q7ZX31 GeneID:379972
KEGG:xla:379972 Xenbase:XB-GENE-972311 Uniprot:Q7ZX31
Length = 416
Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 308 LRHMVSTDNTAIVKGSNRMKSNSHQVE-TYD-----MCVVC--LDGGELICCDH--CPC- 356
L H +S TA + S+ +NS QV+ TYD C+ C + GE++ CD+ CP
Sbjct: 328 LAHELSHQQTAAIPESD---TNS-QVDWTYDPNEPRYCI-CNQVSYGEMVGCDNQDCPIE 382
Query: 357 MYHSSCLGLKDIPYGDWFCPLCCCAI 382
+H C+GL + P G W+CP C A+
Sbjct: 383 WFHYGCVGLSEAPKGKWYCPQCTAAM 408
>UNIPROTKB|Q66KD5 [details] [associations]
symbol:ing3 "Inhibitor of growth protein 3" species:8364
"Xenopus (Silurana) tropicalis" [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0043967 "histone H4
acetylation" evidence=ISS] [GO:0043968 "histone H2A acetylation"
evidence=ISS] [GO:0004402 "histone acetyltransferase activity"
evidence=ISS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0043065
GO:GO:0043968 GO:GO:0043967 GO:GO:0040008 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR024610 Pfam:PF12998
HOVERGEN:HBG006607 HSSP:Q9NXR8 CTD:54556 KO:K11319 EMBL:CR848341
EMBL:BC080450 RefSeq:NP_001008672.1 UniGene:Str.57251
ProteinModelPortal:Q66KD5 SMR:Q66KD5 GeneID:493319 KEGG:xtr:493319
Xenbase:XB-GENE-972305 Uniprot:Q66KD5
Length = 417
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 308 LRHMVSTDNTAIVKGSNRMKSNSHQVE-TYD-----MCVVC--LDGGELICCDH--CPC- 356
L H +S TA + S+ +NS QV+ TYD C+ C + GE++ CD+ CP
Sbjct: 329 LAHELSHQQTAAIPESD---TNS-QVDWTYDPNEPRYCI-CNQVSYGEMVGCDNQDCPIE 383
Query: 357 MYHSSCLGLKDIPYGDWFCPLCCCAI 382
+H C+GL + P G W+CP C A+
Sbjct: 384 WFHYGCVGLSEAPKGKWYCPQCTAAM 409
>ZFIN|ZDB-GENE-080519-2 [details] [associations]
symbol:nsd1b "nuclear receptor binding SET domain
protein 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
ZFIN:ZDB-GENE-080519-2 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:BX842703 IPI:IPI00488658
Ensembl:ENSDART00000131188 Bgee:F1Q9U9 Uniprot:F1Q9U9
Length = 1873
Score = 138 (53.6 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 325 RMKSNSHQVETYDMCVVCLDGGELICCDHCPCMYHSSCLGLKDIPYGDWFCPLC 378
R +H+ C VC +GG L+CC+ CP +H CL + D+P G W+C C
Sbjct: 1249 RKGCRNHEHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNI-DMPEGSWYCNDC 1301
Score = 45 (20.9 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 94 KRACRFDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSD 131
KR +FD+ S+ H + N K+ V+ + S D
Sbjct: 747 KRWQKFDQVSEKTVHIVEGNCIHKTERVSSENCDVSMD 784
Score = 44 (20.5 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 82 DLGQEENHARHAKRA-----CRFDEGSQNLTHNLRANLEEKSVMVTPQTSQSSSDDALHS 136
DL ++ + HAK + C+ DE H++++ E++S +V SQ+ A HS
Sbjct: 521 DLKEDSKISTHAKLSSELLCCKDDE------HSVKS--EDESSLV----SQAPC--AFHS 566
Query: 137 RKRRKKNTEVNLHAKAEAESMDFGNLGQEDD 167
RK+N+ VN + + S+ NL D+
Sbjct: 567 -STRKQNSHVNDLSSSPTPSLHL-NLKDMDN 595
Score = 40 (19.1 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 233 KLIENNVVFPGAKVCYGGKKGRVPLAK 259
+L N V G VC K+ R P K
Sbjct: 938 QLQRQNPVAVGDSVCLNSKRQRKPTKK 964
>UNIPROTKB|E1BNH7 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:DAAA02060851 EMBL:DAAA02060847
EMBL:DAAA02060848 EMBL:DAAA02060849 EMBL:DAAA02060850
IPI:IPI00924282 Ensembl:ENSBTAT00000061245 Uniprot:E1BNH7
Length = 1440
Score = 130 (50.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 27/70 (38%), Positives = 33/70 (47%)
Query: 316 NTAIVKGSNRMKSNSHQVETYDMCVVCLDGGELICCDHCPCM--YHSSCLGLKDIPYGDW 373
N + ++K+ Q+ D C C DGGEL+ CD C YH CL L PYG W
Sbjct: 1305 NAKLKPKRRKIKTEPKQLHE-DFCFQCGDGGELVMCDRKDCSKAYHLLCLNLPQPPYGKW 1363
Query: 374 FCPLCCCAIC 383
CP C C
Sbjct: 1364 ECPWHQCDEC 1373
Score = 44 (20.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 48 LIDEQ-CSQNLTLNLNANPAVNLHAKAESESMDFGDLGQEENHARHAKRACRFDEGSQNL 106
LIDE+ C + + N N + ++ D G + N++R +C + +Q
Sbjct: 1180 LIDEEECRLRIK-RAHENSVTNFYMLTVTKKDRIIDAGPKGNYSRFMNHSCNPNCETQKW 1238
Query: 107 THN 109
T N
Sbjct: 1239 TVN 1241
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 129 (50.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 321 KGSNRMKSNSHQVETYDMCVVCLDGGE---LICCDHCPCMYHSSCL--GLKDIPYGDWFC 375
K +R K ++ V+ Y +C++C G + L+ CD C YH+ CL L D+P GDW C
Sbjct: 294 KPKSRAKKTTNAVDLY-VCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRC 352
Query: 376 PLCCCAIC 383
P C C
Sbjct: 353 PKCLAQEC 360
Score = 44 (20.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 406 CDQCEHKFHTGC 417
C+ C FHT C
Sbjct: 1191 CELCRDAFHTSC 1202
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 656 637 0.00092 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 169
No. of states in DFA: 621 (66 KB)
Total size of DFA: 380 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.28u 0.14s 55.42t Elapsed: 00:00:03
Total cpu time: 55.30u 0.14s 55.44t Elapsed: 00:00:03
Start: Fri May 10 08:52:41 2013 End: Fri May 10 08:52:44 2013
WARNINGS ISSUED: 1