Query 044773
Match_columns 289
No_of_seqs 113 out of 1428
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 11:21:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044773.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044773hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3piu_A 1-aminocyclopropane-1-c 100.0 3.2E-35 1.1E-39 269.9 28.8 240 10-252 190-433 (435)
2 1iay_A ACC synthase 2, 1-amino 100.0 3.9E-34 1.3E-38 262.0 28.5 240 10-250 187-426 (428)
3 3aow_A Putative uncharacterize 100.0 2.1E-33 7E-38 259.1 24.9 231 2-251 203-445 (448)
4 2r2n_A Kynurenine/alpha-aminoa 100.0 6.1E-33 2.1E-37 254.1 25.6 223 10-250 189-423 (425)
5 3ihj_A Alanine aminotransferas 100.0 9.6E-33 3.3E-37 257.8 23.9 241 11-253 235-495 (498)
6 3qgu_A LL-diaminopimelate amin 100.0 4.5E-33 1.5E-37 256.5 21.2 226 10-253 208-442 (449)
7 3tcm_A Alanine aminotransferas 100.0 1.8E-32 6E-37 256.2 24.4 239 10-253 236-496 (500)
8 3kax_A Aminotransferase, class 100.0 2.7E-32 9.2E-37 245.5 23.8 229 2-248 149-382 (383)
9 1b5p_A Protein (aspartate amin 100.0 1.6E-32 5.4E-37 248.1 21.8 219 10-249 163-383 (385)
10 2x5d_A Probable aminotransfera 100.0 2.9E-32 1E-36 248.3 23.1 227 10-252 171-399 (412)
11 3ei9_A LL-diaminopimelate amin 100.0 1.6E-32 5.6E-37 251.5 21.4 221 9-248 196-425 (432)
12 3dzz_A Putative pyridoxal 5'-p 100.0 2.4E-32 8.1E-37 246.5 22.0 233 2-251 152-389 (391)
13 1gd9_A Aspartate aminotransfer 100.0 5.9E-32 2E-36 244.2 23.6 226 10-251 159-386 (389)
14 3l8a_A METC, putative aminotra 100.0 3.2E-32 1.1E-36 248.9 22.1 230 2-249 186-420 (421)
15 1vp4_A Aminotransferase, putat 100.0 8.3E-32 2.9E-36 246.5 23.4 224 11-253 187-420 (425)
16 3b46_A Aminotransferase BNA3; 100.0 2.3E-32 7.7E-37 252.0 19.7 227 10-246 200-442 (447)
17 1c7n_A Cystalysin; transferase 100.0 5.6E-32 1.9E-36 245.2 21.9 234 2-252 156-394 (399)
18 3fdb_A Beta C-S lyase, putativ 100.0 2.6E-32 8.9E-37 245.3 19.3 228 2-250 143-375 (377)
19 3fvs_A Kynurenine--oxoglutarat 100.0 2.3E-32 7.8E-37 249.5 18.6 230 10-250 173-421 (422)
20 4dq6_A Putative pyridoxal phos 100.0 7.8E-32 2.7E-36 243.1 21.3 221 12-248 165-390 (391)
21 2o1b_A Aminotransferase, class 100.0 1.9E-32 6.4E-37 249.3 16.8 221 10-250 180-402 (404)
22 3nra_A Aspartate aminotransfer 100.0 1.1E-31 3.6E-36 243.7 21.5 231 2-251 172-405 (407)
23 3e2y_A Kynurenine-oxoglutarate 100.0 6.3E-32 2.2E-36 245.5 19.8 226 10-246 166-408 (410)
24 3k7y_A Aspartate aminotransfer 100.0 7E-32 2.4E-36 245.6 20.0 219 2-250 164-404 (405)
25 3asa_A LL-diaminopimelate amin 100.0 4.5E-32 1.5E-36 246.3 18.4 223 10-252 162-394 (400)
26 3jtx_A Aminotransferase; NP_28 100.0 1.8E-31 6.1E-36 241.5 21.3 226 3-248 162-395 (396)
27 1yiz_A Kynurenine aminotransfe 100.0 8.3E-32 2.8E-36 246.5 19.2 229 10-249 181-427 (429)
28 1d2f_A MALY protein; aminotran 100.0 3.9E-31 1.3E-35 239.0 23.3 229 2-251 154-389 (390)
29 3dyd_A Tyrosine aminotransfera 100.0 3.1E-31 1.1E-35 243.0 22.8 228 10-252 190-425 (427)
30 2zy4_A L-aspartate beta-decarb 100.0 3.1E-31 1.1E-35 250.0 22.8 228 10-255 244-526 (546)
31 2zyj_A Alpha-aminodipate amino 100.0 6.9E-31 2.4E-35 238.0 24.2 233 2-252 154-394 (397)
32 2x5f_A Aspartate_tyrosine_phen 100.0 4.3E-31 1.5E-35 241.9 22.9 228 2-251 179-429 (430)
33 2zc0_A Alanine glyoxylate tran 100.0 8.1E-31 2.8E-35 238.1 24.4 232 2-251 161-404 (407)
34 1u08_A Hypothetical aminotrans 100.0 1.9E-31 6.4E-36 240.8 18.7 220 10-246 162-385 (386)
35 2dou_A Probable N-succinyldiam 100.0 1.9E-31 6.5E-36 240.0 18.3 217 10-248 157-375 (376)
36 2o0r_A RV0858C (N-succinyldiam 100.0 5.1E-31 1.7E-35 240.1 20.1 226 10-252 159-397 (411)
37 3h14_A Aminotransferase, class 100.0 2.2E-30 7.4E-35 234.2 23.8 220 11-253 161-384 (391)
38 3d6k_A Putative aminotransfera 100.0 2E-30 6.7E-35 237.2 23.7 234 2-252 170-419 (422)
39 1bw0_A TAT, protein (tyrosine 100.0 1.2E-30 4.3E-35 237.6 22.3 228 10-252 176-414 (416)
40 1j32_A Aspartate aminotransfer 100.0 1.1E-30 3.8E-35 235.7 21.7 223 10-251 162-387 (388)
41 2gb3_A Aspartate aminotransfer 100.0 4.8E-30 1.6E-34 233.6 25.0 228 2-253 167-404 (409)
42 1xi9_A Putative transaminase; 100.0 1.4E-30 4.8E-35 236.8 21.3 223 10-251 173-403 (406)
43 3ppl_A Aspartate aminotransfer 100.0 3E-30 1E-34 236.2 23.2 235 2-252 172-421 (427)
44 3ezs_A Aminotransferase ASPB; 100.0 1.6E-30 5.3E-35 233.7 20.6 224 2-250 147-374 (376)
45 3f6t_A Aspartate aminotransfer 100.0 1.5E-30 5.1E-35 244.9 20.6 228 10-253 243-527 (533)
46 3g7q_A Valine-pyruvate aminotr 100.0 6.2E-30 2.1E-34 232.8 23.0 222 9-252 178-414 (417)
47 3ez1_A Aminotransferase MOCR f 100.0 7.5E-30 2.5E-34 233.1 23.5 236 2-253 163-417 (423)
48 1o4s_A Aspartate aminotransfer 100.0 6.2E-30 2.1E-34 231.4 22.1 213 10-249 173-387 (389)
49 3g0t_A Putative aminotransfera 100.0 3.7E-30 1.3E-34 235.9 20.6 231 2-250 174-436 (437)
50 2z61_A Probable aspartate amin 100.0 2.6E-30 8.8E-35 232.1 19.0 214 10-249 153-369 (370)
51 3rq1_A Aminotransferase class 100.0 6.1E-30 2.1E-34 233.3 21.4 218 11-252 178-416 (418)
52 1v2d_A Glutamine aminotransfer 100.0 5.3E-30 1.8E-34 230.9 20.2 219 10-253 151-373 (381)
53 3op7_A Aminotransferase class 100.0 1E-29 3.4E-34 228.5 21.8 222 3-252 148-372 (375)
54 3ele_A Amino transferase; RER0 100.0 8.7E-30 3E-34 230.6 21.3 212 10-251 171-396 (398)
55 3ftb_A Histidinol-phosphate am 100.0 5.2E-29 1.8E-33 222.4 25.6 213 12-249 145-359 (361)
56 4eu1_A Mitochondrial aspartate 100.0 5.6E-30 1.9E-34 233.0 18.4 218 2-248 173-408 (409)
57 3get_A Histidinol-phosphate am 100.0 2.1E-29 7.2E-34 225.6 21.6 217 2-248 146-364 (365)
58 3b1d_A Betac-S lyase; HET: PLP 99.9 1.1E-32 3.7E-37 249.6 0.0 223 10-249 163-391 (392)
59 3ly1_A Putative histidinol-pho 100.0 7.8E-29 2.7E-33 220.9 25.0 219 2-250 132-351 (354)
60 4f4e_A Aromatic-amino-acid ami 100.0 1.6E-29 5.5E-34 231.0 21.0 218 2-248 185-419 (420)
61 1lc5_A COBD, L-threonine-O-3-p 100.0 7.6E-29 2.6E-33 222.1 24.9 214 10-251 145-360 (364)
62 3t18_A Aminotransferase class 100.0 2E-29 6.7E-34 229.6 19.5 215 11-252 177-411 (413)
63 3if2_A Aminotransferase; YP_26 100.0 1.2E-28 4E-33 226.6 23.7 222 9-252 204-441 (444)
64 1fg7_A Histidinol phosphate am 100.0 1.1E-28 3.6E-33 220.8 22.8 206 11-246 146-353 (356)
65 3fsl_A Aromatic-amino-acid ami 100.0 4.2E-29 1.4E-33 225.9 20.4 217 2-247 163-396 (397)
66 7aat_A Aspartate aminotransfer 100.0 3E-29 1E-33 227.4 19.3 216 4-248 167-400 (401)
67 1ajs_A Aspartate aminotransfer 100.0 5E-29 1.7E-33 226.8 20.1 220 2-250 173-410 (412)
68 3ffh_A Histidinol-phosphate am 100.0 5.4E-28 1.8E-32 216.3 24.0 208 10-247 154-362 (363)
69 4h51_A Aspartate aminotransfer 100.0 1.2E-28 4E-33 224.9 19.9 218 8-253 187-419 (420)
70 3meb_A Aspartate aminotransfer 100.0 1.1E-28 3.7E-33 227.5 19.7 221 2-250 192-443 (448)
71 3euc_A Histidinol-phosphate am 100.0 4.7E-28 1.6E-32 217.0 23.2 215 2-249 149-366 (367)
72 1yaa_A Aspartate aminotransfer 100.0 1.2E-28 4.1E-33 224.3 18.9 220 2-250 166-410 (412)
73 2q7w_A Aspartate aminotransfer 100.0 6.5E-29 2.2E-33 224.6 16.9 216 2-247 162-395 (396)
74 3fkd_A L-threonine-O-3-phospha 100.0 4.2E-28 1.4E-32 216.0 19.7 215 10-252 128-343 (350)
75 2ay1_A Aroat, aromatic amino a 100.0 3.3E-28 1.1E-32 220.0 17.1 217 2-247 159-392 (394)
76 3bwn_A AT1G70560, L-tryptophan 100.0 1.6E-28 5.5E-33 222.6 14.6 208 10-250 156-386 (391)
77 3p1t_A Putative histidinol-pho 100.0 2.4E-26 8.3E-31 203.2 23.8 202 10-249 134-335 (337)
78 3hdo_A Histidinol-phosphate am 99.9 5.2E-26 1.8E-30 203.3 23.4 209 11-253 149-357 (360)
79 1uu1_A Histidinol-phosphate am 99.9 2.2E-26 7.6E-31 203.8 19.3 198 10-247 137-334 (335)
80 3cq5_A Histidinol-phosphate am 99.9 1.3E-25 4.4E-30 201.5 24.1 210 2-249 156-366 (369)
81 2hox_A ALLIIN lyase 1; cystein 99.9 6.4E-27 2.2E-31 214.4 13.6 204 10-249 195-423 (427)
82 3a2b_A Serine palmitoyltransfe 99.9 3.8E-25 1.3E-29 200.2 22.1 222 2-251 162-392 (398)
83 3tqx_A 2-amino-3-ketobutyrate 99.9 4.7E-25 1.6E-29 199.2 18.3 215 11-251 175-396 (399)
84 2dr1_A PH1308 protein, 386AA l 99.9 8.7E-24 3E-28 189.9 22.8 219 2-253 137-381 (386)
85 2bwn_A 5-aminolevulinate synth 99.9 4.5E-24 1.5E-28 193.3 19.8 225 2-250 167-399 (401)
86 1fc4_A 2-amino-3-ketobutyrate 99.9 2E-24 6.8E-29 195.6 17.1 212 11-251 177-397 (401)
87 1vjo_A Alanine--glyoxylate ami 99.9 4.4E-24 1.5E-28 192.7 17.5 215 2-248 151-392 (393)
88 3kki_A CAI-1 autoinducer synth 99.9 3.2E-24 1.1E-28 195.0 15.1 221 2-250 178-403 (409)
89 2w8t_A SPT, serine palmitoyltr 99.9 2.5E-24 8.6E-29 197.0 14.2 226 2-253 183-417 (427)
90 1bs0_A Protein (8-amino-7-oxon 99.9 1.1E-23 3.6E-28 189.7 17.9 218 2-247 158-383 (384)
91 1m32_A 2-aminoethylphosphonate 99.9 2.7E-23 9.2E-28 185.1 18.7 216 2-249 122-363 (366)
92 2z9v_A Aspartate aminotransfer 99.9 9.8E-23 3.3E-27 183.7 21.7 218 2-252 125-372 (392)
93 3zrp_A Serine-pyruvate aminotr 99.9 1.3E-22 4.5E-27 181.9 21.5 216 2-252 119-364 (384)
94 3kgw_A Alanine-glyoxylate amin 99.9 6.5E-23 2.2E-27 184.5 18.9 219 2-252 140-389 (393)
95 3nnk_A Ureidoglycine-glyoxylat 99.9 1.4E-22 4.9E-27 183.5 20.8 218 2-252 130-391 (411)
96 1eg5_A Aminotransferase; PLP-d 99.9 4.8E-23 1.6E-27 184.8 16.6 212 10-253 138-378 (384)
97 2ord_A Acoat, acetylornithine 99.9 7.6E-24 2.6E-28 191.7 11.3 210 3-249 177-395 (397)
98 2yrr_A Aminotransferase, class 99.9 2.1E-22 7.3E-27 178.4 20.1 213 2-249 116-351 (353)
99 3ruy_A Ornithine aminotransfer 99.9 3.6E-23 1.2E-27 186.8 15.2 209 2-248 175-391 (392)
100 3i4j_A Aminotransferase, class 99.9 1.2E-22 4.1E-27 185.8 18.5 233 2-251 179-428 (430)
101 1iug_A Putative aspartate amin 99.9 2E-22 6.7E-27 178.9 18.9 210 10-251 120-348 (352)
102 3isl_A Purine catabolism prote 99.9 3.8E-22 1.3E-26 181.1 20.8 218 2-252 128-391 (416)
103 1e5e_A MGL, methionine gamma-l 99.9 3.7E-22 1.3E-26 181.5 20.5 203 10-253 146-397 (404)
104 2huf_A Alanine glyoxylate amin 99.9 3.9E-22 1.3E-26 179.8 19.3 218 2-253 136-385 (393)
105 1sff_A 4-aminobutyrate aminotr 99.9 1.2E-22 4.3E-27 185.2 15.7 223 2-251 187-424 (426)
106 2ch1_A 3-hydroxykynurenine tra 99.9 3.2E-22 1.1E-26 180.5 18.2 219 2-252 135-384 (396)
107 1kmj_A Selenocysteine lyase; p 99.9 1E-21 3.5E-26 177.4 21.3 214 2-250 157-404 (406)
108 2eh6_A Acoat, acetylornithine 99.9 1.7E-22 5.7E-27 181.2 14.8 200 10-247 171-374 (375)
109 3n5m_A Adenosylmethionine-8-am 99.9 3.4E-22 1.1E-26 184.1 16.5 225 2-249 204-450 (452)
110 1zod_A DGD, 2,2-dialkylglycine 99.9 3.9E-22 1.3E-26 182.5 16.2 224 2-250 192-431 (433)
111 3f9t_A TDC, L-tyrosine decarbo 99.9 7.8E-22 2.7E-26 177.4 17.7 219 2-249 163-396 (397)
112 4adb_A Succinylornithine trans 99.9 5.8E-22 2E-26 179.5 16.5 211 10-252 182-401 (406)
113 3gju_A Putative aminotransfera 99.9 5.6E-22 1.9E-26 183.2 16.2 219 11-252 221-457 (460)
114 2dkj_A Serine hydroxymethyltra 99.9 3E-21 1E-25 174.8 20.2 219 2-250 155-387 (407)
115 1elu_A L-cysteine/L-cystine C- 99.9 5.5E-22 1.9E-26 178.4 15.2 202 10-246 153-387 (390)
116 3nx3_A Acoat, acetylornithine 99.9 7.1E-22 2.4E-26 178.6 15.7 212 10-250 178-394 (395)
117 2aeu_A Hypothetical protein MJ 99.9 1.1E-21 3.6E-26 176.7 16.5 220 9-252 138-372 (374)
118 3f0h_A Aminotransferase; RER07 99.9 2.7E-21 9.4E-26 173.2 18.8 209 9-250 142-373 (376)
119 4eb5_A Probable cysteine desul 99.9 1.2E-21 4.3E-26 175.6 16.5 211 10-253 137-375 (382)
120 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.8E-22 6E-27 180.6 10.3 211 2-250 135-369 (371)
121 1t3i_A Probable cysteine desul 99.9 6.6E-21 2.3E-25 173.0 20.7 209 10-251 168-413 (420)
122 2eo5_A 419AA long hypothetical 99.9 6.1E-22 2.1E-26 180.7 13.7 199 14-250 214-417 (419)
123 4hvk_A Probable cysteine desul 99.9 1.9E-21 6.6E-26 173.9 16.7 211 10-253 137-375 (382)
124 3dxv_A Alpha-amino-epsilon-cap 99.9 7.3E-22 2.5E-26 181.1 14.2 225 2-253 190-427 (439)
125 3ffr_A Phosphoserine aminotran 99.9 2.2E-21 7.6E-26 172.5 17.0 204 8-248 127-361 (362)
126 2pb2_A Acetylornithine/succiny 99.9 1.5E-21 5E-26 178.4 15.7 216 2-251 194-418 (420)
127 1vef_A Acetylornithine/acetyl- 99.9 1.1E-21 3.8E-26 177.2 14.6 210 3-248 179-394 (395)
128 4ffc_A 4-aminobutyrate aminotr 99.9 3.2E-21 1.1E-25 177.9 17.7 221 10-252 223-450 (453)
129 3oks_A 4-aminobutyrate transam 99.9 1.6E-21 5.4E-26 179.8 15.2 218 11-250 226-450 (451)
130 2bkw_A Alanine-glyoxylate amin 99.9 8.1E-21 2.8E-25 170.4 18.9 213 2-250 129-383 (385)
131 1s0a_A Adenosylmethionine-8-am 99.9 3.4E-21 1.2E-25 176.1 16.7 213 2-250 194-423 (429)
132 3lws_A Aromatic amino acid bet 99.9 1.9E-21 6.5E-26 173.3 14.2 210 10-248 134-356 (357)
133 3lvm_A Cysteine desulfurase; s 99.9 3.3E-21 1.1E-25 175.4 15.8 209 10-253 162-401 (423)
134 3pj0_A LMO0305 protein; struct 99.9 6.5E-21 2.2E-25 169.8 16.5 213 9-247 135-358 (359)
135 3dod_A Adenosylmethionine-8-am 99.9 2.9E-21 9.9E-26 177.8 14.6 226 2-252 200-444 (448)
136 3cai_A Possible aminotransfera 99.9 1.1E-20 3.8E-25 171.0 17.7 205 10-246 164-404 (406)
137 4a6r_A Omega transaminase; tra 99.9 5E-21 1.7E-25 176.8 15.3 230 2-255 208-453 (459)
138 3l44_A Glutamate-1-semialdehyd 99.9 8.5E-21 2.9E-25 173.7 16.4 227 2-253 192-432 (434)
139 2ez2_A Beta-tyrosinase, tyrosi 99.9 2.1E-20 7.3E-25 172.0 18.4 233 2-252 163-432 (456)
140 2fyf_A PSAT, phosphoserine ami 99.9 1.2E-20 3.9E-25 171.0 16.2 204 9-250 163-397 (398)
141 2oat_A Ornithine aminotransfer 99.9 1.3E-20 4.5E-25 173.0 16.6 216 2-250 215-438 (439)
142 1z7d_A Ornithine aminotransfer 99.8 1.6E-20 5.5E-25 172.2 16.1 217 2-251 204-429 (433)
143 3ecd_A Serine hydroxymethyltra 99.8 8.5E-20 2.9E-24 166.0 20.4 220 2-251 164-397 (425)
144 1ax4_A Tryptophanase; tryptoph 99.8 4.2E-20 1.4E-24 170.5 18.4 237 2-252 172-442 (467)
145 3fq8_A Glutamate-1-semialdehyd 99.8 1.3E-20 4.4E-25 172.2 14.5 224 2-250 189-426 (427)
146 1jg8_A L-ALLO-threonine aldola 99.8 6E-21 2E-25 169.3 12.0 204 11-250 132-345 (347)
147 3hmu_A Aminotransferase, class 99.8 2.7E-20 9.2E-25 172.5 16.6 228 11-266 223-467 (472)
148 2rfv_A Methionine gamma-lyase; 99.8 9E-20 3.1E-24 165.2 19.4 200 10-246 148-395 (398)
149 1qz9_A Kynureninase; kynurenin 99.8 3.2E-20 1.1E-24 168.6 16.3 209 2-251 158-402 (416)
150 1v72_A Aldolase; PLP-dependent 99.8 1.6E-19 5.5E-24 160.3 19.9 205 11-251 141-353 (356)
151 3tfu_A Adenosylmethionine-8-am 99.8 1.7E-20 5.8E-25 173.2 13.7 216 2-252 223-454 (457)
152 1ibj_A CBL, cystathionine beta 99.8 1.1E-19 3.7E-24 167.9 18.3 208 10-250 216-461 (464)
153 4e77_A Glutamate-1-semialdehyd 99.8 2.1E-20 7.1E-25 171.0 13.1 223 2-249 190-427 (429)
154 2epj_A Glutamate-1-semialdehyd 99.8 2.2E-20 7.7E-25 171.0 13.1 220 2-251 193-431 (434)
155 3k28_A Glutamate-1-semialdehyd 99.8 3.7E-20 1.3E-24 169.4 14.3 218 2-250 190-426 (429)
156 1w23_A Phosphoserine aminotran 99.8 2.7E-20 9.3E-25 165.7 13.0 200 9-250 139-359 (360)
157 3i5t_A Aminotransferase; pyrid 99.8 6E-20 2E-24 170.4 15.3 226 2-255 210-458 (476)
158 3a8u_X Omega-amino acid--pyruv 99.8 7.7E-20 2.6E-24 168.1 15.9 219 2-250 208-446 (449)
159 1svv_A Threonine aldolase; str 99.8 1.6E-19 5.5E-24 160.3 17.1 207 11-250 145-357 (359)
160 3gbx_A Serine hydroxymethyltra 99.8 3.8E-19 1.3E-23 161.4 19.7 218 2-251 161-396 (420)
161 2c0r_A PSAT, phosphoserine ami 99.8 7.3E-20 2.5E-24 163.4 12.8 199 9-250 140-360 (362)
162 2e7u_A Glutamate-1-semialdehyd 99.8 9E-20 3.1E-24 166.5 13.2 216 2-247 189-423 (424)
163 2oqx_A Tryptophanase; lyase, p 99.8 2.1E-19 7E-24 165.9 15.5 231 2-252 172-443 (467)
164 1cs1_A CGS, protein (cystathio 99.8 4E-18 1.4E-22 153.6 23.2 206 2-250 130-382 (386)
165 3h7f_A Serine hydroxymethyltra 99.8 6.9E-19 2.4E-23 161.9 18.2 220 2-252 177-415 (447)
166 2vi8_A Serine hydroxymethyltra 99.8 1.9E-18 6.6E-23 156.1 20.9 219 2-251 155-387 (405)
167 3ke3_A Putative serine-pyruvat 99.8 1.7E-18 5.7E-23 155.9 20.3 219 2-252 127-377 (379)
168 3vax_A Putative uncharacterize 99.8 2E-20 6.8E-25 169.0 7.7 207 10-250 158-399 (400)
169 3n0l_A Serine hydroxymethyltra 99.8 2.6E-18 8.9E-23 155.9 21.4 220 2-251 156-389 (417)
170 2cjg_A L-lysine-epsilon aminot 99.8 3.1E-19 1.1E-23 164.3 15.5 210 2-250 221-447 (449)
171 1pff_A Methionine gamma-lyase; 99.8 6.1E-19 2.1E-23 155.5 16.2 199 10-246 82-329 (331)
172 2cy8_A D-phgat, D-phenylglycin 99.8 2.7E-19 9.1E-24 164.8 14.2 219 2-253 191-437 (453)
173 3e9k_A Kynureninase; kynurenin 99.8 4.3E-19 1.5E-23 163.9 15.5 213 2-251 204-461 (465)
174 3cog_A Cystathionine gamma-lya 99.8 1.8E-18 6.1E-23 157.2 18.9 109 10-138 150-262 (403)
175 1wyu_B Glycine dehydrogenase s 99.8 4.3E-19 1.5E-23 164.5 15.0 212 10-250 202-440 (474)
176 1rv3_A Serine hydroxymethyltra 99.8 2.6E-18 8.8E-23 159.6 19.5 218 2-250 185-430 (483)
177 3mad_A Sphingosine-1-phosphate 99.8 3.9E-18 1.3E-22 159.6 20.5 220 2-253 232-471 (514)
178 1gc0_A Methionine gamma-lyase; 99.8 5.6E-18 1.9E-22 153.5 19.8 200 10-246 149-396 (398)
179 3ndn_A O-succinylhomoserine su 99.8 7.6E-19 2.6E-23 160.1 14.0 213 2-248 159-413 (414)
180 3a9z_A Selenocysteine lyase; P 99.8 1.6E-18 5.6E-23 158.2 16.0 210 10-252 174-429 (432)
181 1n8p_A Cystathionine gamma-lya 99.8 1.1E-17 3.8E-22 151.4 20.3 210 2-246 131-390 (393)
182 3qhx_A Cystathionine gamma-syn 99.8 1.4E-17 4.9E-22 150.6 20.7 208 3-248 145-391 (392)
183 1qgn_A Protein (cystathionine 99.8 2.4E-17 8.4E-22 151.3 20.6 210 2-250 192-444 (445)
184 3acz_A Methionine gamma-lyase; 99.8 2.9E-17 1E-21 148.4 20.5 199 10-249 143-387 (389)
185 3mc6_A Sphingosine-1-phosphate 99.8 3.9E-18 1.3E-22 158.8 14.7 218 2-253 199-439 (497)
186 2cb1_A O-acetyl homoserine sul 99.8 6.5E-17 2.2E-21 147.1 22.0 205 3-246 134-411 (412)
187 1b9h_A AHBA synthase, protein 99.7 3.3E-17 1.1E-21 147.4 16.2 210 10-250 125-387 (388)
188 3ri6_A O-acetylhomoserine sulf 99.7 2.5E-17 8.5E-22 150.7 14.5 202 10-248 166-429 (430)
189 2z67_A O-phosphoseryl-tRNA(SEC 99.7 6.8E-17 2.3E-21 149.0 16.4 216 2-248 219-455 (456)
190 1ohv_A 4-aminobutyrate aminotr 99.7 3.9E-17 1.3E-21 151.3 14.1 203 11-250 258-470 (472)
191 2oga_A Transaminase; PLP-depen 99.7 1.1E-16 3.6E-21 144.9 16.5 205 10-250 150-395 (399)
192 2x3l_A ORN/Lys/Arg decarboxyla 99.7 2.3E-17 7.9E-22 151.7 11.6 203 8-251 143-353 (446)
193 2yky_A Beta-transaminase; tran 99.6 4.4E-19 1.5E-23 163.5 0.0 219 2-252 223-461 (465)
194 3nmy_A Xometc, cystathionine g 99.7 2.1E-16 7.1E-21 143.4 16.9 209 3-249 146-397 (400)
195 2dgk_A GAD-beta, GADB, glutama 99.7 4.5E-16 1.5E-20 143.2 18.3 224 3-253 181-436 (452)
196 1mdo_A ARNB aminotransferase; 99.7 4.6E-16 1.6E-20 140.0 17.4 207 10-252 126-387 (393)
197 2a7v_A Serine hydroxymethyltra 99.7 2.7E-15 9.4E-20 139.0 21.2 220 2-251 195-441 (490)
198 2po3_A 4-dehydrase; external a 99.7 6.9E-16 2.3E-20 140.7 16.8 212 10-253 137-388 (424)
199 2qma_A Diaminobutyrate-pyruvat 99.7 1E-15 3.5E-20 142.5 17.5 213 12-250 259-495 (497)
200 2c81_A Glutamine-2-deoxy-scyll 99.7 1.4E-15 4.8E-20 138.3 17.9 211 10-252 129-415 (418)
201 2okj_A Glutamate decarboxylase 99.7 1.9E-15 6.5E-20 141.0 18.0 218 11-250 245-501 (504)
202 2fq6_A Cystathionine beta-lyas 99.7 1.6E-15 5.5E-20 138.1 16.8 136 2-167 160-300 (415)
203 1js3_A DDC;, DOPA decarboxylas 99.7 2.4E-15 8.2E-20 139.6 18.2 212 13-253 237-476 (486)
204 3hbx_A GAD 1, glutamate decarb 99.7 3.2E-15 1.1E-19 139.4 18.3 221 10-253 201-446 (502)
205 1wyu_A Glycine dehydrogenase ( 99.7 2.2E-15 7.5E-20 138.1 16.8 204 9-248 194-437 (438)
206 2fnu_A Aminotransferase; prote 99.6 1.2E-14 4E-19 129.8 19.5 204 10-251 120-372 (375)
207 3uwc_A Nucleotide-sugar aminot 99.6 2.9E-15 9.8E-20 133.9 15.4 205 10-250 124-370 (374)
208 2ctz_A O-acetyl-L-homoserine s 99.6 3.8E-15 1.3E-19 135.9 16.0 84 3-107 138-221 (421)
209 3dr4_A Putative perosamine syn 99.6 2.6E-15 8.7E-20 135.3 13.4 204 10-248 143-390 (391)
210 2jis_A Cysteine sulfinic acid 99.6 3.2E-14 1.1E-18 133.1 20.5 218 11-249 259-513 (515)
211 3vp6_A Glutamate decarboxylase 99.6 2E-14 7E-19 134.2 18.0 219 12-251 249-505 (511)
212 3k40_A Aromatic-L-amino-acid d 99.6 1.2E-14 4.2E-19 134.6 16.0 214 12-252 235-472 (475)
213 4ao9_A Beta-phenylalanine amin 99.6 3.4E-14 1.2E-18 130.2 17.3 222 2-255 210-450 (454)
214 1o69_A Aminotransferase; struc 99.6 1.4E-13 4.8E-18 124.2 19.7 218 2-250 112-386 (394)
215 4e1o_A HDC, histidine decarbox 99.6 4.3E-14 1.5E-18 131.1 16.0 214 12-252 242-479 (481)
216 3frk_A QDTB; aminotransferase, 99.6 2.8E-14 9.5E-19 127.7 14.1 205 10-250 123-367 (373)
217 1c4k_A Protein (ornithine deca 99.6 8.3E-14 2.8E-18 134.6 17.3 219 13-252 283-567 (730)
218 3nyt_A Aminotransferase WBPE; 99.5 2.2E-13 7.5E-18 121.7 17.0 198 10-247 122-360 (367)
219 4atq_A 4-aminobutyrate transam 99.5 2.6E-13 8.9E-18 124.7 17.1 220 11-251 226-455 (456)
220 3i16_A Aluminum resistance pro 99.5 4.4E-14 1.5E-18 128.8 11.3 173 2-206 167-355 (427)
221 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.5 4.3E-13 1.5E-17 122.7 17.2 204 10-249 157-434 (437)
222 2vyc_A Biodegradative arginine 99.5 9.9E-14 3.4E-18 135.0 13.5 225 2-252 295-606 (755)
223 4a0g_A Adenosylmethionine-8-am 99.5 1.6E-14 5.6E-19 141.6 7.4 216 11-251 594-828 (831)
224 4e3q_A Pyruvate transaminase; 99.5 6.4E-13 2.2E-17 122.5 17.1 213 12-253 236-470 (473)
225 3hvy_A Cystathionine beta-lyas 99.5 1.2E-13 4.2E-18 125.9 11.2 170 2-204 167-353 (427)
226 3ht4_A Aluminum resistance pro 99.5 1.9E-13 6.6E-18 124.9 12.3 172 3-206 159-344 (431)
227 3jzl_A Putative cystathionine 99.5 2.2E-13 7.5E-18 123.6 10.5 164 10-206 158-338 (409)
228 3n75_A LDC, lysine decarboxyla 99.4 1.3E-12 4.4E-17 125.6 11.6 225 2-251 285-560 (715)
229 3e77_A Phosphoserine aminotran 99.4 1.1E-11 3.8E-16 111.1 16.9 204 9-250 150-374 (377)
230 3ju7_A Putative PLP-dependent 99.4 1.2E-11 4.2E-16 111.0 15.8 205 12-251 130-375 (377)
231 3qm2_A Phosphoserine aminotran 99.3 4E-11 1.4E-15 107.9 15.8 200 9-250 164-384 (386)
232 3m5u_A Phosphoserine aminotran 99.3 1.3E-10 4.5E-15 103.6 17.0 200 9-250 138-359 (361)
233 3hl2_A O-phosphoseryl-tRNA(SEC 99.3 3.6E-10 1.2E-14 102.2 19.4 232 2-254 205-464 (501)
234 3b8x_A WBDK, pyridoxamine 5-ph 99.3 3.8E-10 1.3E-14 101.3 19.2 202 10-244 127-389 (390)
235 3ou5_A Serine hydroxymethyltra 99.1 8.5E-09 2.9E-13 93.0 20.3 219 2-250 195-440 (490)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.1 1.4E-08 5E-13 92.3 20.2 233 2-253 187-445 (450)
237 4gqr_A Pancreatic alpha-amylas 49.6 13 0.00043 33.3 3.8 28 29-56 75-102 (496)
238 2ya0_A Putative alkaline amylo 46.8 15 0.0005 35.2 3.9 27 30-56 254-280 (714)
239 2yl5_A Beta-N-acetylhexosamini 41.6 22 0.00074 31.9 3.9 28 22-49 86-113 (442)
240 1g94_A Alpha-amylase; beta-alp 40.9 19 0.00065 32.1 3.5 46 11-56 28-90 (448)
241 1hjs_A Beta-1,4-galactanase; 4 40.6 75 0.0026 27.1 7.1 46 11-56 40-85 (332)
242 1lwj_A 4-alpha-glucanotransfer 40.1 25 0.00086 31.2 4.2 28 29-56 68-95 (441)
243 1ht6_A AMY1, alpha-amylase iso 40.0 26 0.00088 30.8 4.2 29 28-56 66-94 (405)
244 1gcy_A Glucan 1,4-alpha-maltot 39.2 30 0.001 31.6 4.6 30 29-58 91-120 (527)
245 2yl6_A Beta-N-acetylhexosamini 39.0 21 0.0007 32.0 3.3 28 22-49 83-110 (434)
246 2ya1_A Putative alkaline amylo 38.6 22 0.00075 35.6 3.8 27 30-56 561-587 (1014)
247 1wza_A Alpha-amylase A; hydrol 38.0 30 0.001 31.1 4.4 28 29-56 80-107 (488)
248 1mxg_A Alpha amylase; hyperthe 37.9 29 0.00099 30.8 4.2 28 29-56 85-112 (435)
249 3bh4_A Alpha-amylase; calcium, 37.7 25 0.00086 31.6 3.8 28 29-56 77-104 (483)
250 4aie_A Glucan 1,6-alpha-glucos 37.7 28 0.00096 31.6 4.2 28 29-56 78-105 (549)
251 1ud2_A Amylase, alpha-amylase; 37.5 25 0.00087 31.6 3.8 28 29-56 79-106 (480)
252 2aaa_A Alpha-amylase; glycosid 37.3 32 0.0011 30.9 4.4 30 29-58 96-125 (484)
253 2z1k_A (NEO)pullulanase; hydro 37.3 29 0.001 31.0 4.2 29 29-57 95-123 (475)
254 2guy_A Alpha-amylase A; (beta- 37.2 30 0.001 31.1 4.2 29 29-57 96-124 (478)
255 2dh2_A 4F2 cell-surface antige 37.0 33 0.0011 30.4 4.4 29 29-57 80-108 (424)
256 1vhx_A Putative holliday junct 36.9 91 0.0031 23.2 6.2 53 2-55 47-102 (150)
257 1hvx_A Alpha-amylase; hydrolas 36.6 26 0.00091 31.9 3.8 28 29-56 80-107 (515)
258 1wpc_A Glucan 1,4-alpha-maltoh 36.5 27 0.00092 31.5 3.8 28 29-56 81-108 (485)
259 1fob_A Beta-1,4-galactanase; B 36.4 58 0.002 27.8 5.7 36 21-56 50-85 (334)
260 1ua7_A Alpha-amylase; beta-alp 35.8 32 0.0011 30.3 4.1 29 29-57 73-101 (422)
261 1jae_A Alpha-amylase; glycosid 35.1 28 0.00096 31.3 3.7 29 29-57 73-101 (471)
262 1j0h_A Neopullulanase; beta-al 33.3 36 0.0012 31.6 4.2 29 29-57 221-249 (588)
263 2wc7_A Alpha amylase, catalyti 33.1 29 0.001 31.2 3.4 28 29-56 101-128 (488)
264 1x7f_A Outer surface protein; 32.8 46 0.0016 29.2 4.4 27 30-56 73-99 (385)
265 1ur4_A Galactanase; hydrolase, 32.8 99 0.0034 27.2 6.7 44 13-56 66-114 (399)
266 1wzl_A Alpha-amylase II; pullu 32.8 35 0.0012 31.7 4.0 30 28-57 217-246 (585)
267 1snn_A DHBP synthase, 3,4-dihy 31.9 41 0.0014 27.1 3.7 34 13-49 179-212 (227)
268 3dhu_A Alpha-amylase; structur 31.8 36 0.0012 30.2 3.8 28 29-56 82-109 (449)
269 4gfq_A Ribosome-recycling fact 31.8 1.9E+02 0.0065 22.9 9.1 49 202-255 104-152 (209)
270 1zja_A Trehalulose synthase; s 31.5 41 0.0014 30.9 4.2 28 29-56 78-105 (557)
271 1m53_A Isomaltulose synthase; 31.3 41 0.0014 31.0 4.2 28 29-56 91-118 (570)
272 4aef_A Neopullulanase (alpha-a 30.9 41 0.0014 31.6 4.2 29 28-56 283-311 (645)
273 3pzt_A Endoglucanase; alpha/be 30.7 33 0.0011 29.2 3.2 24 30-53 104-127 (327)
274 3edf_A FSPCMD, cyclomaltodextr 30.6 44 0.0015 31.1 4.2 28 29-56 197-224 (601)
275 7a3h_A Endoglucanase; hydrolas 30.6 33 0.0011 28.7 3.2 25 30-54 79-103 (303)
276 2bhu_A Maltooligosyltrehalose 30.1 52 0.0018 30.6 4.7 29 29-57 191-219 (602)
277 1uok_A Oligo-1,6-glucosidase; 30.0 45 0.0015 30.7 4.2 28 29-56 77-104 (558)
278 2whl_A Beta-mannanase, baman5; 29.5 40 0.0014 27.9 3.4 25 29-53 62-86 (294)
279 3jug_A Beta-mannanase; TIM-bar 28.8 37 0.0013 29.3 3.1 26 29-54 85-110 (345)
280 1bqc_A Protein (beta-mannanase 28.7 45 0.0015 27.7 3.7 24 29-52 63-86 (302)
281 1tvn_A Cellulase, endoglucanas 28.7 40 0.0014 27.8 3.4 24 31-54 79-102 (293)
282 1ea9_C Cyclomaltodextrinase; h 28.5 58 0.002 30.1 4.7 30 28-57 216-245 (583)
283 3dc7_A Putative uncharacterize 28.5 1.2E+02 0.0039 23.6 6.0 47 2-48 120-178 (232)
284 3aj7_A Oligo-1,6-glucosidase; 28.3 49 0.0017 30.7 4.2 28 29-56 86-113 (589)
285 3bzy_B ESCU; auto cleavage pro 27.9 38 0.0013 22.6 2.4 22 33-54 29-50 (83)
286 3bc9_A AMYB, alpha amylase, ca 27.8 45 0.0015 31.1 3.8 28 29-56 207-234 (599)
287 1m7x_A 1,4-alpha-glucan branch 27.6 77 0.0026 29.6 5.4 29 28-56 202-230 (617)
288 1d3c_A Cyclodextrin glycosyltr 27.6 44 0.0015 31.7 3.8 28 29-56 114-141 (686)
289 1cyg_A Cyclodextrin glucanotra 27.5 45 0.0015 31.6 3.8 28 29-56 110-137 (680)
290 3n9k_A Glucan 1,3-beta-glucosi 27.5 42 0.0014 29.5 3.4 24 29-52 111-134 (399)
291 3bmv_A Cyclomaltodextrin gluca 27.4 45 0.0015 31.6 3.8 28 29-56 115-142 (683)
292 2zic_A Dextran glucosidase; TI 27.4 49 0.0017 30.3 4.0 28 29-56 77-104 (543)
293 1g01_A Endoglucanase; alpha/be 27.3 43 0.0015 28.8 3.4 23 31-53 90-112 (364)
294 3civ_A Endo-beta-1,4-mannanase 27.3 81 0.0028 27.0 5.1 24 28-51 94-117 (343)
295 1qho_A Alpha-amylase; glycosid 27.2 46 0.0016 31.6 3.8 28 29-56 106-133 (686)
296 3m07_A Putative alpha amylase; 26.9 70 0.0024 29.9 4.9 29 29-57 201-229 (618)
297 2ze0_A Alpha-glucosidase; TIM 26.8 50 0.0017 30.3 3.9 28 29-56 77-104 (555)
298 3vup_A Beta-1,4-mannanase; TIM 26.4 46 0.0016 27.4 3.4 22 31-52 90-111 (351)
299 3rcn_A Beta-N-acetylhexosamini 26.2 51 0.0017 30.4 3.7 28 22-49 215-242 (543)
300 1h4p_A Glucan 1,3-beta-glucosi 26.1 46 0.0016 29.3 3.4 26 29-54 112-137 (408)
301 1egz_A Endoglucanase Z, EGZ, C 26.0 48 0.0017 27.3 3.4 22 31-52 77-98 (291)
302 3faw_A Reticulocyte binding pr 25.7 60 0.002 31.9 4.3 27 30-56 369-395 (877)
303 1yht_A DSPB; beta barrel, hydr 25.7 50 0.0017 28.7 3.5 25 25-49 89-113 (367)
304 4aee_A Alpha amylase, catalyti 25.6 49 0.0017 31.4 3.7 28 29-56 310-337 (696)
305 3vgf_A Malto-oligosyltrehalose 25.6 68 0.0023 29.5 4.5 29 29-57 166-194 (558)
306 1ji1_A Alpha-amylase I; beta/a 25.4 64 0.0022 30.2 4.4 29 29-57 237-269 (637)
307 2cks_A Endoglucanase E-5; carb 25.4 46 0.0016 27.7 3.1 23 31-53 80-102 (306)
308 2a1v_A Conserved hypothetical 25.3 1.7E+02 0.0056 21.5 5.9 50 198-249 66-116 (144)
309 1g57_A DHBP synthase, 3,4-dihy 25.1 69 0.0024 25.6 3.9 35 11-49 167-201 (217)
310 4hty_A Cellulase; (alpha/beta) 24.9 50 0.0017 28.3 3.4 24 30-53 120-143 (359)
311 3qr3_A Endoglucanase EG-II; TI 24.1 54 0.0019 28.1 3.4 25 31-55 84-108 (340)
312 2gjx_A Beta-hexosaminidase alp 24.1 64 0.0022 29.4 4.0 27 23-49 207-233 (507)
313 2vt1_B Surface presentation of 23.6 50 0.0017 22.6 2.4 22 33-54 29-50 (93)
314 1h1n_A Endo type cellulase ENG 23.4 57 0.002 27.1 3.4 23 32-54 73-95 (305)
315 2wsk_A Glycogen debranching en 23.3 76 0.0026 29.9 4.5 30 29-58 240-269 (657)
316 2e8y_A AMYX protein, pullulana 23.1 66 0.0023 30.7 4.0 27 30-56 315-341 (718)
317 2p0o_A Hypothetical protein DU 22.9 43 0.0015 29.2 2.4 85 30-137 49-133 (372)
318 1g5a_A Amylosucrase; glycosylt 22.9 62 0.0021 30.3 3.8 28 29-56 161-188 (628)
319 1ceo_A Cellulase CELC; glycosy 22.8 59 0.002 27.4 3.4 24 31-54 69-92 (343)
320 3czg_A Sucrose hydrolase; (alp 22.7 63 0.0022 30.4 3.8 28 29-56 154-181 (644)
321 3v7e_A Ribosome-associated pro 22.5 1.7E+02 0.0057 19.1 5.6 40 4-51 21-60 (82)
322 4gmf_A Yersiniabactin biosynth 22.4 1.4E+02 0.0049 25.8 5.8 27 28-54 103-129 (372)
323 2qlc_A DNA repair protein RADC 22.3 2.2E+02 0.0075 20.4 6.3 42 2-46 60-105 (126)
324 1qnr_A Endo-1,4-B-D-mannanase; 22.3 57 0.0019 27.4 3.2 23 30-52 89-111 (344)
325 2kfp_A Pspto_3016 protein; alp 21.9 1.4E+02 0.0047 21.3 4.7 43 199-245 70-113 (125)
326 3zss_A Putative glucanohydrola 21.7 68 0.0023 30.5 3.8 26 29-54 319-344 (695)
327 3l55_A B-1,4-endoglucanase/cel 21.4 61 0.0021 27.9 3.2 25 31-55 91-115 (353)
328 3oqb_A Oxidoreductase; structu 21.4 1.2E+02 0.0042 25.9 5.2 65 2-71 75-157 (383)
329 3k1d_A 1,4-alpha-glucan-branch 21.4 80 0.0027 30.2 4.2 30 27-56 309-338 (722)
330 3c01_E Surface presentation of 21.3 53 0.0018 22.7 2.2 22 33-54 29-50 (98)
331 3t7y_A YOP proteins translocat 21.3 54 0.0018 22.6 2.2 22 33-54 44-65 (97)
332 2vr5_A Glycogen operon protein 21.2 1E+02 0.0035 29.4 4.9 29 30-58 266-294 (718)
333 1wky_A Endo-beta-1,4-mannanase 21.2 64 0.0022 28.9 3.4 25 29-53 70-94 (464)
334 1ge9_A Ribosome recycling fact 21.2 2.9E+02 0.0099 21.3 9.7 51 200-256 81-131 (184)
335 3aml_A OS06G0726400 protein; s 20.8 84 0.0029 30.2 4.2 29 28-56 248-276 (755)
336 1bf2_A Isoamylase; hydrolase, 20.7 98 0.0033 29.7 4.7 28 30-57 272-299 (750)
337 3cpq_A 50S ribosomal protein L 20.5 2E+02 0.0068 19.8 5.3 38 3-48 30-67 (110)
338 1ece_A Endocellulase E1; glyco 20.4 70 0.0024 27.1 3.4 25 29-53 93-117 (358)
339 4aio_A Limit dextrinase; hydro 20.3 1E+02 0.0035 29.8 4.9 29 30-58 378-406 (884)
340 1vjz_A Endoglucanase; TM1752, 20.3 67 0.0023 27.1 3.2 26 29-54 75-100 (341)
341 2c0h_A Mannan endo-1,4-beta-ma 20.2 71 0.0024 26.9 3.4 22 30-51 90-111 (353)
342 2wan_A Pullulanase; hydrolase, 20.2 89 0.003 30.8 4.4 28 30-57 531-558 (921)
343 1jak_A Beta-N-acetylhexosamini 20.1 86 0.003 28.6 4.0 25 25-49 225-249 (512)
No 1
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=3.2e-35 Score=269.87 Aligned_cols=240 Identities=82% Similarity=1.312 Sum_probs=205.4
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC----CCCceE
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE----VWNRVH 85 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~~~i 85 (289)
.++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++.++..+..+ | ..++++
T Consensus 190 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~---d~~~~~~~~~i 266 (435)
T 3piu_A 190 LRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNC---DENSEVWQRVH 266 (435)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC----------CGGGGEE
T ss_pred CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhcccccc---ccccCCCCCEE
Confidence 478999999999999999999999999999999999999999999988887777777766542100 0 057889
Q ss_pred EEecCccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 86 IVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 86 ~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 165 (289)
+++||||.+|++|+|+||++++++.+.+.+.....++..+++.|.++..++....++++++++.++.++++++++.+.|+
T Consensus 267 ~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 346 (435)
T 3piu_A 267 VVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQ 346 (435)
T ss_dssp EEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987777777777766776889999999999998877677888999999999999999999
Q ss_pred hcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHH
Q 044773 166 KAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 245 (289)
Q Consensus 166 ~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~ 245 (289)
+.|+++..+.+|+++|++++.........+..+++..+++++||.+.||..|++.+++++||+++..+++++++++++|+
T Consensus 347 ~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~ 426 (435)
T 3piu_A 347 KSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLK 426 (435)
T ss_dssp TTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHH
T ss_pred hcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHH
Confidence 98999999999999999998754433333456788888878899999999998878899999997559999999999999
Q ss_pred HHHHHHH
Q 044773 246 AFVDSIT 252 (289)
Q Consensus 246 ~~l~~~~ 252 (289)
+++++..
T Consensus 427 ~~l~~~~ 433 (435)
T 3piu_A 427 AFVGEYY 433 (435)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9987653
No 2
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=3.9e-34 Score=262.00 Aligned_cols=240 Identities=58% Similarity=1.038 Sum_probs=194.9
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..+..+... .....++++++.|
T Consensus 187 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~viv~~s 265 (428)
T 1iay_A 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEM-TYCNKDLVHIVYS 265 (428)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGG-TTSCTTSEEEEEE
T ss_pred CceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhcccccc-ccCCCCcEEEEec
Confidence 478999999999999999999999999999999999999999999877766555566665421000 0001478899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKAGI 169 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 169 (289)
+||.+|++|+|+||++++++.+.+.+.....++.+|++.|.++..++++..++++++++.++.++++++++.+.|+++|+
T Consensus 266 ~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 345 (428)
T 1iay_A 266 LSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGI 345 (428)
T ss_dssp STTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred chhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999767676666665555568899999999999987754678899999999999999999999888
Q ss_pred ceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHH
Q 044773 170 SCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 170 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 249 (289)
++.++++|+|+|++++.........+..++...|++++||.+.||..|+..+++++||+++..+++++++++++|+++++
T Consensus 346 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 346 KCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp CBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 88888788999999876432222223346788888677999999998876556899999985699999999999999875
Q ss_pred H
Q 044773 250 S 250 (289)
Q Consensus 250 ~ 250 (289)
+
T Consensus 426 ~ 426 (428)
T 1iay_A 426 V 426 (428)
T ss_dssp T
T ss_pred c
Confidence 4
No 3
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=2.1e-33 Score=259.13 Aligned_cols=231 Identities=21% Similarity=0.313 Sum_probs=190.0
Q ss_pred hHHHhh----hCCCccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccc
Q 044773 2 YQLAQK----RHLKVKGV-LVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCE 76 (289)
Q Consensus 2 l~~~~~----~~~~~~~i-~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~ 76 (289)
+++++. ..+++++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++....++.++
T Consensus 203 L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~------- 275 (448)
T 3aow_A 203 LEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL------- 275 (448)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGG-------
T ss_pred HHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhc-------
Confidence 455554 32478997 578999999999999999999999999999999999999988876655666665
Q ss_pred cCCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 044773 77 NTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 77 ~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
+..+++++++||||.++ +|+|+||++++ +.+.+.+.... .....|++.|.++..+|+...+ .+++++.++.++
T Consensus 276 --~~~~~vi~~~S~SK~~~-~GlriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~ 350 (448)
T 3aow_A 276 --DNEGRVIYLGTFSKILA-PGFRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYL-EKHIPEIRKFYK 350 (448)
T ss_dssp --CTTSCEEEEEESTTTTC-GGGCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHH-HHHHHHHHHHHH
T ss_pred --CCCCCEEEEccchhhcc-ccccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCH-HHHHHHHHHHHH
Confidence 34578999999999999 99999999996 44554444332 1234788999999999988755 788999999999
Q ss_pred HHHHHHHHHHHhc---CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEE
Q 044773 155 QRHRKLVSGLEKA---GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCF 229 (289)
Q Consensus 155 ~~~~~l~~~l~~~---g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~--~~~~~Ris~ 229 (289)
++++++.+.|++. |+++..|.+|+|+|++++...+ ..+++..++++ ||.+.||..|+.. .++++||++
T Consensus 351 ~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~------~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~ 423 (448)
T 3aow_A 351 PRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGID------SKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNF 423 (448)
T ss_dssp HHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCC------HHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCC------HHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEe
Confidence 9999999999885 7888889999999999975322 25688888755 9999999988753 468999999
Q ss_pred ecCCHHHHHHHHHHHHHHHHHH
Q 044773 230 ANMSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 230 ~~~~~e~l~~~l~~l~~~l~~~ 251 (289)
+..+++++++++++|++++++.
T Consensus 424 ~~~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 424 TYVDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp SSSCTHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 8668999999999999998765
No 4
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=6.1e-33 Score=254.07 Aligned_cols=223 Identities=18% Similarity=0.295 Sum_probs=181.0
Q ss_pred CCccEEEE-eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLV-TNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l-~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|++ ++||||||.+++.+++++|+++|+++|++||+||+|+++.+++....++.++ +..+++++++
T Consensus 189 ~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~---------~~~~~~i~~~ 259 (425)
T 2r2n_A 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSM---------DVDGRVIRAD 259 (425)
T ss_dssp CCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGG---------CTTSCEEEEE
T ss_pred CCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCcccc---------CCCCCEEEEc
Confidence 36888866 6899999999999999999999999999999999999888877666666665 3457899999
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCC---chHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSD---KKFAQNYISENKKRLKQRHRKLVSG 163 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (289)
||||+++ +|+|+||++++++ +.+.+.... ..+++|++.|.++..+++. +.+ .+++++.++.++++++++.+.
T Consensus 260 s~SK~~~-~GlRiG~~~~~~~-l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 336 (425)
T 2r2n_A 260 SFSKIIS-SGLRIGFLTGPKP-LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGF-MAHVDRVIDFYSNQKDAILAA 336 (425)
T ss_dssp ESTTTTC-STTCCEEEEEEHH-HHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcc-CccceEEEecCHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 9999999999754 444443332 2245788999999999986 344 678899999999999999999
Q ss_pred HHhc--CC-ceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC---CCCeEEEEEecCCHHHH
Q 044773 164 LEKA--GI-SCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT---EPGWFRVCFANMSEDTL 237 (289)
Q Consensus 164 l~~~--g~-~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~---~~~~~Ris~~~~~~e~l 237 (289)
|++. |+ .+..|.+|+|+|++++...+. .+++...+.++||.+.||..|+.. +.+++||+++..+++++
T Consensus 337 L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~------~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i 410 (425)
T 2r2n_A 337 ADKWLTGLAEWHVPAAGMFLWIKVKGINDV------KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQM 410 (425)
T ss_dssp HHHHCSSSEEECCCSBSSEEEEEETTCSCC------HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHH
T ss_pred HHHHCCCCeEEeCCCceEEEEEEeCCCCCH------HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHH
Confidence 9885 66 467789999999999864332 243344455889999999999753 35799999975599999
Q ss_pred HHHHHHHHHHHHH
Q 044773 238 KLSMQRLKAFVDS 250 (289)
Q Consensus 238 ~~~l~~l~~~l~~ 250 (289)
++++++|++++++
T Consensus 411 ~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 411 DVAFQVLAQLIKE 423 (425)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998865
No 5
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.6e-33 Score=257.82 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=187.7
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCC-CccChhhhhhccccccCCCCCceEEEec
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSP-GFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
++++|+++|||||||.+++.+++++|+++|++++++||+||+|..+.+++. .+.++..+..+... ..+...++++++|
T Consensus 235 ~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~i~~~S 313 (498)
T 3ihj_A 235 DPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGP-EYSSNVELASFHS 313 (498)
T ss_dssp EEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCH-HHHTTCCEEEEEE
T ss_pred CCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcc-cccCceeEEEEec
Confidence 589999999999999999999999999999999999999999999888754 56777776542100 0001235789999
Q ss_pred Ccccc-CCCCceEEEEEe--cCHHHHHHHHhc-cccCCCChHHHHHHHHHhCC-----chH--HHHHHHHHHHHHHHHHH
Q 044773 90 LSKDL-GLPGFRVGAIYS--NDDTVVAAATKM-SSFGLVSSQTQYLLSALLSD-----KKF--AQNYISENKKRLKQRHR 158 (289)
Q Consensus 90 ~sK~~-g~~G~r~G~i~~--~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~-----~~~--~~~~~~~~~~~~~~~~~ 158 (289)
|||.+ |++|+|+||+++ .++.+.+.+... ....+++.+.|.++..++.. +.+ +.++.++.++.++++++
T Consensus 314 ~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 393 (498)
T 3ihj_A 314 TSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAK 393 (498)
T ss_dssp SSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999 889999999984 456666655443 33455778999999999975 222 13445678899999999
Q ss_pred HHHHHHHhc-CCceecCCceEEEEEecCccccC------CChhhHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEEe
Q 044773 159 KLVSGLEKA-GISCLKSNAGLFCWVDMRHLLSS------NTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFA 230 (289)
Q Consensus 159 ~l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~~~Ris~~ 230 (289)
++.+.|+++ |+++.++++|+|+|+++..+... ....+...++..+++++||.+.||+.|+. .+++++|++++
T Consensus 394 ~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~ 473 (498)
T 3ihj_A 394 LTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL 473 (498)
T ss_dssp HHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC
T ss_pred HHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC
Confidence 999999998 89999999999999876532110 01112222367788889999999999985 55679999998
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHH
Q 044773 231 NMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 231 ~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
++++++++++++|+++++++.+
T Consensus 474 -~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 474 -PPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999988765
No 6
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=4.5e-33 Score=256.47 Aligned_cols=226 Identities=20% Similarity=0.236 Sum_probs=186.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. ..+++++++|
T Consensus 208 ~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~s 279 (449)
T 3qgu_A 208 KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPG--------ADEVAIETCS 279 (449)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTT--------GGGTEEEEEE
T ss_pred CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccC--------CCCcEEEEec
Confidence 57899999999999999999999999999999999999999999998777655556655521 3477899999
Q ss_pred CccccCCCCceEEEEEecCHHHH-------HHHHh--ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVV-------AAATK--MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~-------~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 160 (289)
|||.+|++|+|+||++++++.+. ..... ...+...+++.|.++..++.... .+++++.++.++++++++
T Consensus 280 ~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l 357 (449)
T 3qgu_A 280 FSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG--LKEMNAMIKFYKENAQIL 357 (449)
T ss_dssp CSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH--HHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999765432 12222 22344578899999999988632 467889999999999999
Q ss_pred HHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHH
Q 044773 161 VSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLS 240 (289)
Q Consensus 161 ~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~ 240 (289)
.+.|++.|+++..+++|+++|++++ ..+ ..+++..|++++||.+.||..|++.+++++||++.. ++++++++
T Consensus 358 ~~~L~~~g~~~~~~~~~~~~~~~~~-~~~------~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~ 429 (449)
T 3qgu_A 358 KTTFTEMGFSVYGGDDAPYIWVGFP-GKP------SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEA 429 (449)
T ss_dssp HHHHHHTTCCEEESSSSSEEEEECT-TSC------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHH
T ss_pred HHHHHHCCCeeeCCCCeeEEEEECC-CCC------HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHH
Confidence 9999999999999998999999987 222 256888888888999999999987778999999875 89999999
Q ss_pred HHHHHHHHHHHHH
Q 044773 241 MQRLKAFVDSITT 253 (289)
Q Consensus 241 l~~l~~~l~~~~~ 253 (289)
+++|++++++...
T Consensus 430 l~~l~~~~~~~~~ 442 (449)
T 3qgu_A 430 VRRFKEAYGKRNA 442 (449)
T ss_dssp HHHHHHHHC----
T ss_pred HHHHHHHHHhcCc
Confidence 9999998876543
No 7
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.8e-32 Score=256.23 Aligned_cols=239 Identities=20% Similarity=0.284 Sum_probs=187.6
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCC-CCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSS-PGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
.++++|+++|||||||.+++.+++++|+++|+++++++|+||+|+.+.+++ ....++..+..+.+ ..+...++++++
T Consensus 236 ~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~--~~~~~~~~i~~~ 313 (500)
T 3tcm_A 236 INVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLG--YGEEDLPLVSYQ 313 (500)
T ss_dssp CEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTT--CSSSCCCEEEEE
T ss_pred CCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhc--cccCCeEEEEEe
Confidence 368999999999999999999999999999999999999999999988854 35567665544320 001224578999
Q ss_pred cCcccc-CCCCceEEEEEe---cCHHHHHHHHhc-cccCCCChHHHHHHHHHhCCch--------HHHHHHHHHHHHHHH
Q 044773 89 SLSKDL-GLPGFRVGAIYS---NDDTVVAAATKM-SSFGLVSSQTQYLLSALLSDKK--------FAQNYISENKKRLKQ 155 (289)
Q Consensus 89 s~sK~~-g~~G~r~G~i~~---~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~~~~~~~~ 155 (289)
||||.| |++|+|+||+++ +++ +.+.+... ....+++.+.|.++..++.... + .++..+.++.+++
T Consensus 314 S~SK~~~g~~G~R~G~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~ 391 (500)
T 3tcm_A 314 SVSKGYYGECGKRGGYFEITGFSAP-VREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASY-KAEKDGILASLAR 391 (500)
T ss_dssp ESSSTTTCCGGGCCEEEEEESCCTT-HHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHH-HHHHHHHHHHHHH
T ss_pred cCCccCCCCCccceEEEEEeCCCHH-HHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHH-HHHHHHHHHHHHH
Confidence 999999 899999999998 544 44444333 3345578899999999997532 3 5667888899999
Q ss_pred HHHHHHHHHHhc-CCceecCCceEEEEEecCcccc------CCChhhHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEE
Q 044773 156 RHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLS------SNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRV 227 (289)
Q Consensus 156 ~~~~l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~------~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~~~Ri 227 (289)
+++.+.+.|+++ |+++.++++|+|+|+++..+.. .....+...++..+++++||.+.||+.|+. .+.+++|+
T Consensus 392 ~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRi 471 (500)
T 3tcm_A 392 RAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRC 471 (500)
T ss_dssp HHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEE
T ss_pred HHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEE
Confidence 999999999998 9999999999999976542211 000112234566788889999999999985 56779999
Q ss_pred EEecCCHHHHHHHHHHHHHHHHHHHH
Q 044773 228 CFANMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 228 s~~~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+++ ++++++++++++|+++++++.+
T Consensus 472 s~~-~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 472 TIL-PQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp ESC-SCTTTHHHHHHHHHHHHHHHHH
T ss_pred EEC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 999 6999999999999999988765
No 8
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.7e-32 Score=245.49 Aligned_cols=229 Identities=17% Similarity=0.261 Sum_probs=191.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++ .+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+..+ ..
T Consensus 149 l~~~l--~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~ 219 (383)
T 3kax_A 149 LEKQF--QQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEE-------LA 219 (383)
T ss_dssp HHHHH--TTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHH-------HH
T ss_pred HHHHh--CcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCcc-------cc
Confidence 34555 3579999999999999999999999999999999999999999999988877666666666331 24
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc---ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS---SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
++++++.|+||.+|++|+|+||++++++.+.+.+.... .++..+++.+.++..++... .+++++.+++++++++
T Consensus 220 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~ 296 (383)
T 3kax_A 220 ARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC---NDWLNEIRFYIEDNAK 296 (383)
T ss_dssp TTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHH
Confidence 78899999999999999999999997666666555432 23357889999999999874 5668889999999999
Q ss_pred HHHHHHHhc--CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHH
Q 044773 159 KLVSGLEKA--GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDT 236 (289)
Q Consensus 159 ~l~~~l~~~--g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~ 236 (289)
++.+.|++. |+++..+.+++++|++++... .+..+++..|++++||.+.||..|+..+++++||+++. ++++
T Consensus 297 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~ 370 (383)
T 3kax_A 297 FACEYIKDHIPTLSVMKPEGSFLLWIDCSALN-----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC-PRSV 370 (383)
T ss_dssp HHHHHHHHHCTTCEECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSS-CHHH
T ss_pred HHHHHHHhhCCCceEecCCceEEEEEEccccC-----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC-CHHH
Confidence 999999985 899999999999999987531 12256888887788999999999988778999999994 8999
Q ss_pred HHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFV 248 (289)
Q Consensus 237 l~~~l~~l~~~l 248 (289)
+++++++|++++
T Consensus 371 i~~~l~~l~~~l 382 (383)
T 3kax_A 371 LEEILNRLRHTF 382 (383)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 9
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.6e-32 Score=248.09 Aligned_cols=219 Identities=19% Similarity=0.409 Sum_probs=178.4
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|+++|||||||.+++.+++++|+++|+++|+++|+||+|+.+.+++ ...++.++ +. +++++++|
T Consensus 163 ~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~---------~~-~~~i~~~s 231 (385)
T 1b5p_A 163 PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRV---------AP-EHTLTVNG 231 (385)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGT---------CT-TTEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHc---------CC-CCEEEEEe
Confidence 468999999999999999999999999999999999999999999887765 44555555 23 78999999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
|||.+|++|+|+||+++++ .+.+.+..... ...++.+.|.++..+++......+++++.++.++++++++.+.|+++
T Consensus 232 ~SK~~~~~G~RiG~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 232 AAKAFAMTGWRIGYACGPK-EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp STTTTTCGGGCCEEEECCH-HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCcccceEEEEeCH-HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999954 45444443322 23477899999988987611114568889999999999999999988
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
|+++.++++++++|++++.. . .+..++...|+ ++||.+.||..|+. ++++||+++ ++++++++++++|+++
T Consensus 311 g~~~~~~~~~~~~~~~~~~~-~----~~~~~l~~~l~-~~gv~v~~g~~f~~--~~~iRis~~-~~~~~i~~~l~~l~~~ 381 (385)
T 1b5p_A 311 GLKAVRPSGAFYVLMDTSPI-A----PDEVRAAERLL-EAGVAVVPGTDFAA--FGHVRLSYA-TSEENLRKALERFARV 381 (385)
T ss_dssp TCCBCCCSBTTEEEEECTTT-C----SSHHHHHHHHH-HTTEECEESGGGTC--TTEEEEECC-SCHHHHHHHHHHGGGG
T ss_pred CCeecCCCeeEEEEEecCCC-C----CCHHHHHHHHH-HCCeEEecccccCC--CCeEEEEec-CCHHHHHHHHHHHHHH
Confidence 99988999999999988631 1 12356888887 78999999999975 679999999 5899999999999876
Q ss_pred HH
Q 044773 248 VD 249 (289)
Q Consensus 248 l~ 249 (289)
++
T Consensus 382 l~ 383 (385)
T 1b5p_A 382 LG 383 (385)
T ss_dssp C-
T ss_pred Hh
Confidence 54
No 10
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.9e-32 Score=248.33 Aligned_cols=227 Identities=22% Similarity=0.329 Sum_probs=185.1
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++.++.. ..+++++++|
T Consensus 171 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~~~~i~~~s 242 (412)
T 2x5d_A 171 PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPG--------AKDIAVEFFT 242 (412)
T ss_dssp SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT--------GGGTEEEEEE
T ss_pred cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccC--------ccCcEEEEec
Confidence 47899999999999999999999999999999999999999999998776655556655521 2478899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++ +.+.+.+..... .++.+++.|.++..+++.. .+++++.++.++++++++.+.|+++
T Consensus 243 ~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (412)
T 2x5d_A 243 LSKSYNMAGWRIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIARQYQQRRDVLVKGLREA 318 (412)
T ss_dssp CC-CCSCTTSCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCcccceEEEEcC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999995 455554443322 3457889999999998864 3557888999999999999999988
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
|+++..+.+|+++|++++..... .+..+++..|++++||.+.||..|+..+++++||+++. +++++++++++|+++
T Consensus 319 g~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 394 (412)
T 2x5d_A 319 GWMVENPKASMYVWAKIPEPYAH---LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAM 394 (412)
T ss_dssp TCCCCCCSBSSEEEEECCTTTGG---GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCEecCCCeeeEEEEEcCCccCC---CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 88888888999999998643210 12356888887778999999999876567899999986 899999999999999
Q ss_pred HHHHH
Q 044773 248 VDSIT 252 (289)
Q Consensus 248 l~~~~ 252 (289)
+++..
T Consensus 395 l~~~~ 399 (412)
T 2x5d_A 395 FRADG 399 (412)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 87654
No 11
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1.6e-32 Score=251.50 Aligned_cols=221 Identities=18% Similarity=0.257 Sum_probs=182.1
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
.+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++..+.. ..+++++++
T Consensus 196 ~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~--------~~~~~i~~~ 266 (432)
T 3ei9_A 196 VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN-PRSIFEIPG--------AEEVAMETA 266 (432)
T ss_dssp CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC-CSSGGGSTT--------GGGTEEEEE
T ss_pred CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC-CCChhhcCC--------CCCeEEEEe
Confidence 46789999999999999999999999999999999999999999998866543 345544421 347789999
Q ss_pred cCccccCCCCceEEEEEecCHH-------HHHHHHhc--cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDT-------VVAAATKM--SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~-------~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
||||++|++|+|+||++++++. +.+.+... ..+..++++.|.++..++.+.. .+++++.++.+++++++
T Consensus 267 S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~ 344 (432)
T 3ei9_A 267 SFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEG--LEAMHKVIGFYKENTNI 344 (432)
T ss_dssp ESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHH--HHHHHHHHHHHHHHHHH
T ss_pred cchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHH
Confidence 9999999999999999997766 23444332 2234478899999888887532 46788999999999999
Q ss_pred HHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHH
Q 044773 160 LVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 239 (289)
Q Consensus 160 l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~ 239 (289)
+.+.|+++|+++.++.+++|+|++++. . +..+++..+++++||.+.||..|++.+++++||+++. +++++++
T Consensus 345 l~~~L~~~g~~~~~~~~~~~~~~~~~~-~------~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~~ 416 (432)
T 3ei9_A 345 IIDTFTSLGYDVYGGKNAPYVWVHFPN-Q------SSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENILE 416 (432)
T ss_dssp HHHHHHHTTCCEEECSSSSEEEEECTT-S------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHH
T ss_pred HHHHHHHCCceecCCCcceEEEEECCC-C------CHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHHH
Confidence 999999999998888888999999983 1 1246788888888999999999987778999999975 9999999
Q ss_pred HHHHHHHHH
Q 044773 240 SMQRLKAFV 248 (289)
Q Consensus 240 ~l~~l~~~l 248 (289)
++++|++-.
T Consensus 417 ~l~rl~~~~ 425 (432)
T 3ei9_A 417 ACRRFKQLY 425 (432)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999997643
No 12
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=2.4e-32 Score=246.53 Aligned_cols=233 Identities=22% Similarity=0.264 Sum_probs=192.7
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
++++++. +++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+.+....++..+.. +..
T Consensus 152 l~~~l~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-------~~~ 223 (391)
T 3dzz_A 152 LEEKLAT-PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDW-------DAK 223 (391)
T ss_dssp HHHHHTS-TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCT-------TTG
T ss_pred HHHHHhc-cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCc-------ccc
Confidence 4555543 47999999999999999999999999999999999999999999998887766666666532 124
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc---cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM---SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
++++++.|+||.+|++|+|+||++++++.+.+.+... ...+..+++.+.++..++... .+++++.+++++++++
T Consensus 224 d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~ 300 (391)
T 3dzz_A 224 NWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---HDWLRELKQVLRDNFA 300 (391)
T ss_dssp GGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999767666665544 233457888888888888753 5668889999999999
Q ss_pred HHHHHHHhc--CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHH
Q 044773 159 KLVSGLEKA--GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDT 236 (289)
Q Consensus 159 ~l~~~l~~~--g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~ 236 (289)
++.+.|++. |+++..+.+++++|++++... .+..++...|++++||.+.||..|+..+++++||+++ +++++
T Consensus 301 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~ 374 (391)
T 3dzz_A 301 YAREFLAKEVPEVKVLDSNASYLAWVDISALG-----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CPKEL 374 (391)
T ss_dssp HHHHHHHHHCTTSEECCCCBSSEEEEECGGGC-----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SCHHH
T ss_pred HHHHHHHhhCCCcEEeccCceEEEEEehhhcC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHH
Confidence 999999984 899999999999999987531 1225688888767899999999998777799999999 59999
Q ss_pred HHHHHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFVDSI 251 (289)
Q Consensus 237 l~~~l~~l~~~l~~~ 251 (289)
+++++++|++++++.
T Consensus 375 i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 375 VIDGMQRLKQGVLNL 389 (391)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988753
No 13
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=5.9e-32 Score=244.22 Aligned_cols=226 Identities=19% Similarity=0.403 Sum_probs=184.9
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++.++.. ..+++++++|
T Consensus 159 ~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~s 230 (389)
T 1gd9_A 159 DKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDG--------MFERTITVNG 230 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTT--------CGGGEEEEEE
T ss_pred cCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccC--------CCCCEEEEec
Confidence 36899999999999999999999999999999999999999999988776554455555421 2468899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++ +.+.+.+..... .+..+++.|.++..+++.... .+++++.++.++++++++.+.|+++
T Consensus 231 ~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 231 FSKTFAMTGWRLGFVAAP-SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS-WKAVEEMRKEYDRRRKLVWKRLNEM 308 (389)
T ss_dssp STTTTTCGGGCCEEEECC-HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChhhcCCcccceEEEEEC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999899999999996 455554443322 244788999999999987533 3478899999999999999999988
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
|+++..+++|+++|++++... .+..+++..|++++||.+.||..|+..+++++||+++. +++++++++++|+++
T Consensus 309 g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~ 382 (389)
T 1gd9_A 309 GLPTVKPKGAFYIFPRIRDTG-----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERV 382 (389)
T ss_dssp TCCCCCCCBTTEECCBCGGGT-----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCeecCCCeeeEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 988888889999999886411 12246788887688999999998876567899999986 899999999999998
Q ss_pred HHHH
Q 044773 248 VDSI 251 (289)
Q Consensus 248 l~~~ 251 (289)
+++.
T Consensus 383 ~~~~ 386 (389)
T 1gd9_A 383 LKER 386 (389)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8754
No 14
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=3.2e-32 Score=248.92 Aligned_cols=230 Identities=15% Similarity=0.205 Sum_probs=192.7
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++.. +++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.+ |..
T Consensus 186 le~~i~~-~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-------~~~ 257 (421)
T 3l8a_A 186 LEKDIID-NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDA-------SYK 257 (421)
T ss_dssp HHHHHHH-TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCT-------TGG
T ss_pred HHHHhhc-cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCc-------hhc
Confidence 4555553 47999999999999999999999999999999999999999999999888776667666643 245
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc---ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS---SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
++++++.|+||.+|++|+|+||++++++.+.+.+.... .++..|++.+.++.+++... ++++++.++.++++++
T Consensus 258 ~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~---~~~~~~~~~~~~~~~~ 334 (421)
T 3l8a_A 258 DFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG---KPWLEELKTVIEGNIK 334 (421)
T ss_dssp GTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHH
Confidence 78899999999999899999999997677766554432 34457889999988888743 6678899999999999
Q ss_pred HHHHHHHhc-CCceecCCceEEEEEecCcc-ccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHH
Q 044773 159 KLVSGLEKA-GISCLKSNAGLFCWVDMRHL-LSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDT 236 (289)
Q Consensus 159 ~l~~~l~~~-g~~~~~~~~g~~~~i~~~~~-~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~ 236 (289)
++.+.|+++ ++.+..+.++++.|++++.. .+. .++...|++++||.+.||..|+..+++++||+++ .++++
T Consensus 335 ~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~------~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~ 407 (421)
T 3l8a_A 335 LVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQ------PQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPKNT 407 (421)
T ss_dssp HHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCT------THHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHH
T ss_pred HHHHHHHhCCCceEeCCCeeEEEEEeccccCCCH------HHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCHHH
Confidence 999999986 89999999999999998863 222 3578888778899999999998777899999999 49999
Q ss_pred HHHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFVD 249 (289)
Q Consensus 237 l~~~l~~l~~~l~ 249 (289)
+++++++|+++++
T Consensus 408 i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 408 VQEALSRIISVFG 420 (421)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 15
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=8.3e-32 Score=246.47 Aligned_cols=224 Identities=20% Similarity=0.334 Sum_probs=183.8
Q ss_pred CccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 11 KVKGV-LVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 11 ~~~~i-~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
++++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+ +..+++++++|
T Consensus 187 ~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~---------~~~~~~i~~~s 257 (425)
T 1vp4_A 187 QVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKI---------GGPERVVLLNT 257 (425)
T ss_dssp GEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHH---------HCTTTEEEEEE
T ss_pred CceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHh---------CCCCCEEEEec
Confidence 68888 578999999999999999999999999999999999999987766655666665 23467899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
|||.+| +|+|+||++++ +.+.+.+.... ..+..|++.|.++..+++...+ .+++++.++.++++++++.+.|++.
T Consensus 258 ~sK~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 334 (425)
T 1vp4_A 258 FSKVLA-PGLRIGMVAGS-KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDL-LEQLKPTIELYRRKRTVMLNALEEY 334 (425)
T ss_dssp STTTTC-GGGCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCH-HHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccc-cccceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999 99999999996 44554444322 1234688999999999987544 6778899999999999999999886
Q ss_pred -----CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEEecCCHHHHHHH
Q 044773 168 -----GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCFANMSEDTLKLS 240 (289)
Q Consensus 168 -----g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~--~~~~~Ris~~~~~~e~l~~~ 240 (289)
|+++..+.+|+++|++++...+. .+++..|+++ ||.+.||..|+.. .++++||+++..++++++++
T Consensus 335 ~~~~~g~~~~~~~~g~~~~~~~~~~~~~------~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~ 407 (425)
T 1vp4_A 335 FSDIPGVKWVKSEGGLFIWLTLPEGFDT------WEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEG 407 (425)
T ss_dssp STTSTTCEECCCSBSSEEEEECCTTCCT------TTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHH
T ss_pred CCCCCceEEecCCccEEEEEEcCCCCCH------HHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHH
Confidence 68888888899999999753332 3477777756 9999999988653 46899999986589999999
Q ss_pred HHHHHHHHHHHHH
Q 044773 241 MQRLKAFVDSITT 253 (289)
Q Consensus 241 l~~l~~~l~~~~~ 253 (289)
+++|++++++..+
T Consensus 408 l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 408 IKRLREVVLEYGK 420 (425)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987665
No 16
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=251.99 Aligned_cols=227 Identities=20% Similarity=0.316 Sum_probs=181.8
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ...++..+.+ +..+++++++|
T Consensus 200 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~-------~~~~~~i~i~S 271 (447)
T 3b46_A 200 SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSP-------EIGQLTLTVGS 271 (447)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCH-------HHHTTEEEEEE
T ss_pred cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCC-------CCCCcEEEEec
Confidence 578999999999999999999999999999999999999999999987766 3344444411 13478999999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++++.+.+.+.... ..++.+++.|.++..+|+.... ++++++.++.++++++++.+.|+++
T Consensus 272 ~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 272 AGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALK-IGYFEKMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp HHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcc-hHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999993344444444321 2344788999999989886543 6678899999999999999999998
Q ss_pred CCceecCCceEEEEEecCccccCCC---------hhhHHHHHHHHHHhcCeEEeCCCCCCCC-----CCCeEEEEEecCC
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNT---------FEAEMELWKKIVYDVKLNISPGSSCHCT-----EPGWFRVCFANMS 233 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~---------~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----~~~~~Ris~~~~~ 233 (289)
|+++..+++|+|+|++++....... ..+..+++..|++++||.+.||..|+.. +++++||+++. +
T Consensus 351 g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~-~ 429 (447)
T 3b46_A 351 GLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK-D 429 (447)
T ss_dssp TCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-C
T ss_pred CCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-C
Confidence 9998889999999999875210000 0234568888887889999999988753 26899999985 8
Q ss_pred HHHHHHHHHHHHH
Q 044773 234 EDTLKLSMQRLKA 246 (289)
Q Consensus 234 ~e~l~~~l~~l~~ 246 (289)
++++++++++|++
T Consensus 430 ~e~l~~~~~~l~~ 442 (447)
T 3b46_A 430 DAYLENAVERLKL 442 (447)
T ss_dssp HHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999976
No 17
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=5.6e-32 Score=245.15 Aligned_cols=234 Identities=15% Similarity=0.205 Sum_probs=187.8
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++.. +++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.++ ..
T Consensus 156 l~~~l~~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~ 227 (399)
T 1c7n_A 156 LEKLSKD-KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQ-------LA 227 (399)
T ss_dssp HHHHHTC-TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHH-------HH
T ss_pred HHHHhcc-CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCcc-------cc
Confidence 3445543 478999999999999999999999999999999999999999999987766555555554210 14
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc---cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS---FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
++++++.|+||.+|++|+|+||++++++.+.+.+..... +..++++.+.++.+++... .+++++.++.++++++
T Consensus 228 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~ 304 (399)
T 1c7n_A 228 DKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC---GKWLDGCIKVIDKNQR 304 (399)
T ss_dssp TTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHH
Confidence 678999999999999999999999976655555544322 2246888999888888753 4568888999999999
Q ss_pred HHHHHHHh-c-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHH
Q 044773 159 KLVSGLEK-A-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDT 236 (289)
Q Consensus 159 ~l~~~l~~-~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~ 236 (289)
++.+.|++ + ++++.++.+++++|++++... .+..++...|++++||.+.||..|+...++++||+++. ++++
T Consensus 305 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~ 378 (399)
T 1c7n_A 305 IVKDFFEVNHPEIKAPLIEGTYLQWIDFRALK-----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSV 378 (399)
T ss_dssp HHHHHHHHHCTTSBCCCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHH
T ss_pred HHHHHHHhhCCCCeEecCCceEEEEEEcccCC-----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHH
Confidence 99999998 5 888888999999999987530 11246788887678999999998876567899999985 6899
Q ss_pred HHHHHHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFVDSIT 252 (289)
Q Consensus 237 l~~~l~~l~~~l~~~~ 252 (289)
+++++++|++++++..
T Consensus 379 l~~~l~~l~~~l~~~~ 394 (399)
T 1c7n_A 379 IQESLERLNKALKDLK 394 (399)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987653
No 18
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.6e-32 Score=245.25 Aligned_cols=228 Identities=18% Similarity=0.245 Sum_probs=189.1
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCC-CCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSS-PGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++.. +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ....++..+. .
T Consensus 143 l~~~l~~--~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~---------~ 211 (377)
T 3fdb_A 143 VEKGFQA--GARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDT---------A 211 (377)
T ss_dssp HHHHHHT--TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHH---------H
T ss_pred HHHHhcc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHcc---------C
Confidence 4555554 47899999999999999999999999999999999999999999987776 4444544431 2
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
.+++++++|+||.+|++|+|+||++++++.+.+.+..... .+..+++.+.++..++... .+++++.++.++++++
T Consensus 212 ~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~ 288 (377)
T 3fdb_A 212 ASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG---TDFLNQEVAYLKNNHD 288 (377)
T ss_dssp HHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHH
Confidence 4778999999999999999999999877777766655433 2457889999988888754 5668889999999999
Q ss_pred HHHHHHHhc--CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHH
Q 044773 159 KLVSGLEKA--GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDT 236 (289)
Q Consensus 159 ~l~~~l~~~--g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~ 236 (289)
++.+.|++. ++++..+++++++|++++..... .+++..+++++||.+.||..|+...++++||+++. ++++
T Consensus 289 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~ 361 (377)
T 3fdb_A 289 FLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIE------GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREV 361 (377)
T ss_dssp HHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCC------SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHH
T ss_pred HHHHHHHhhCCCceEecCCeeEEEEEECcccCCC------HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHH
Confidence 999999985 89999999999999998863211 13777788788999999999987678999999995 8999
Q ss_pred HHHHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFVDS 250 (289)
Q Consensus 237 l~~~l~~l~~~l~~ 250 (289)
+++++++|++++++
T Consensus 362 i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 362 LEEAIDRMAKAVSH 375 (377)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 19
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=2.3e-32 Score=249.48 Aligned_cols=230 Identities=20% Similarity=0.357 Sum_probs=186.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. ..+++++++|
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S 244 (422)
T 3fvs_A 173 SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPG--------MWERTLTIGS 244 (422)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT--------TGGGEEEEEE
T ss_pred CCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhccc--------ccCcEEEEec
Confidence 47899999999999999999999999999999999999999999998887766666666532 3478899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCC-----chHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSD-----KKFAQNYISENKKRLKQRHRKLVS 162 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~l~~ 162 (289)
+||.+|++|+|+||++++++ +.+.+.... ..+.++++.|.++..++.. ..+ .+++++.++.++++++++.+
T Consensus 245 ~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 322 (422)
T 3fvs_A 245 AGKTFSATGWKVGWVLGPDH-IMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQP-SSYFVQFPQAMQRCRDHMIR 322 (422)
T ss_dssp HHHHHTCGGGCCEEEECCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCT-TCHHHHHHHHHHHHHHHHHH
T ss_pred chhccCCccceEEEEEeCHH-HHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccch-HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999654 444443332 2344788999999888874 222 56688899999999999999
Q ss_pred HHHhcCCceecCCceEEEEEecCccccC-C------ChhhHHHHHHHHHHhcCeEEeCCCCCCC-----CCCCeEEEEEe
Q 044773 163 GLEKAGISCLKSNAGLFCWVDMRHLLSS-N------TFEAEMELWKKIVYDVKLNISPGSSCHC-----TEPGWFRVCFA 230 (289)
Q Consensus 163 ~l~~~g~~~~~~~~g~~~~i~~~~~~~~-~------~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~~~Ris~~ 230 (289)
.|++.|+++..+++|+++|++++..... . ......+++..+++++||.+.||+.|+. .+++++||+++
T Consensus 323 ~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~ 402 (422)
T 3fvs_A 323 SLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 402 (422)
T ss_dssp HHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC
T ss_pred HHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEec
Confidence 9999999989999999999998753110 0 0000346888888888999999999864 35789999999
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q 044773 231 NMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 231 ~~~~e~l~~~l~~l~~~l~~ 250 (289)
. +++++++++++|++++++
T Consensus 403 ~-~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 403 K-DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp C-CHHHHHHHHHHHHHHHHC
T ss_pred C-CHHHHHHHHHHHHHHHhh
Confidence 6 999999999999998753
No 20
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=7.8e-32 Score=243.12 Aligned_cols=221 Identities=19% Similarity=0.273 Sum_probs=184.4
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCc
Q 044773 12 VKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLS 91 (289)
Q Consensus 12 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~s 91 (289)
+++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. |..++++++.|+|
T Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-------~~~~~~i~~~s~s 237 (391)
T 4dq6_A 165 VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISK-------EFEKNTITCMAPT 237 (391)
T ss_dssp EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCH-------HHHHTEEEEECSH
T ss_pred CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCc-------cccCcEEEEEech
Confidence 899999999999999999999999999999999999999999998887766666665532 1247889999999
Q ss_pred cccCCCCceEEEEEecCHHHHHHHHhcc---ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 044773 92 KDLGLPGFRVGAIYSNDDTVVAAATKMS---SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA- 167 (289)
Q Consensus 92 K~~g~~G~r~G~i~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 167 (289)
|.+|++|+|+||++++++.+.+.+.... ..+..+++.+.++..++... .+++++.++.++++++++.+.|++.
T Consensus 238 K~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~ 314 (391)
T 4dq6_A 238 KTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ESWLESFLEYLESNIDFAIKYINENM 314 (391)
T ss_dssp HHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999998756665554432 23347788888888888753 5668888999999999999999884
Q ss_pred -CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHH
Q 044773 168 -GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 246 (289)
Q Consensus 168 -g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 246 (289)
|+++..+.+++++|++++... .+..++...|++++||.+.||..|+..+++++||+++ .+++++++++++|++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~ 388 (391)
T 4dq6_A 315 PKLKVRKPEGTYLLWVDFSALG-----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA-CPRSMLEEALIRIKN 388 (391)
T ss_dssp TTSEECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-SCHHHHHHHHHHHHH
T ss_pred CCCEecCCCccEEEEEEhhhcC-----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-CCHHHHHHHHHHHHH
Confidence 899999999999999987521 1225688888866699999999998877899999999 589999999999998
Q ss_pred HH
Q 044773 247 FV 248 (289)
Q Consensus 247 ~l 248 (289)
++
T Consensus 389 ~l 390 (391)
T 4dq6_A 389 AI 390 (391)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 21
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.9e-32 Score=249.27 Aligned_cols=221 Identities=20% Similarity=0.303 Sum_probs=180.6
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ...++.++.. ..+++++++|
T Consensus 180 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~--------~~~~~i~~~s 250 (404)
T 2o1b_A 180 DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASEN--------GKDVAIEIYS 250 (404)
T ss_dssp HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTT--------HHHHEEEEEE
T ss_pred cCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCC--------CCCCEEEEEe
Confidence 368999999999999999999999999999999999999999999887755 3344444421 2367899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++ +.+.+.+..... .+..+++.|.++..+++.. .+++++.++.++++++++.+.|++.
T Consensus 251 ~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (404)
T 2o1b_A 251 LSKGYNMSGFRVGFAVGN-KDMIQALKKYQTHTNAGMFGALQDAAIYALNHY---DDFLEEQSNVFKTRRDRFEAMLAKA 326 (404)
T ss_dssp STTTTTCGGGCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhccCchhheEeEecC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999899999999995 445544443322 2457889999998888763 5668889999999999999999988
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
|+++..+++|+++|++++...+ ..+++..+++++||.+.||..|+...++++||+++. +++++++++++|+++
T Consensus 327 g~~~~~~~~g~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~ 399 (404)
T 2o1b_A 327 DLPFVHAKGGIYVWLETPPGYD------SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTEL 399 (404)
T ss_dssp TCCEECCCBSSEEEEECCTTCC------HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGG
T ss_pred CCeecCCCcceEEEEeCCCCCC------HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence 9998889999999999874322 246788888778999999998875557899999986 789999999999887
Q ss_pred HHH
Q 044773 248 VDS 250 (289)
Q Consensus 248 l~~ 250 (289)
+++
T Consensus 400 l~~ 402 (404)
T 2o1b_A 400 AYL 402 (404)
T ss_dssp GGG
T ss_pred HHh
Confidence 654
No 22
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.1e-31 Score=243.68 Aligned_cols=231 Identities=18% Similarity=0.306 Sum_probs=187.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++.. ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. +..
T Consensus 172 l~~~l~~--~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~-------~~~ 242 (407)
T 3nra_A 172 LEEAFKA--GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAA-------VDA 242 (407)
T ss_dssp HHHHHHT--TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTT-------SCG
T ss_pred HHHHHhh--CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCc-------ccC
Confidence 3455553 6899999999999999999999999999999999999999999998887766666555421 135
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
+++++++||||.+|++|+|+||++++ +.+.+.+..... ....+++.+.++..++... .+++++.++++++++++
T Consensus 243 ~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~ 318 (407)
T 3nra_A 243 ENVVTIMGPSKTESLSGYRLGVAFGS-RAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA---PGWMEDRIARHQAIRDE 318 (407)
T ss_dssp GGEEEEECSSSTTCCGGGCCEEEEEC-HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC---TTHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCcccccCCCeeeEEEEEcC-HHHHHHHHHHHhhhccCCChHHHHHHHHHHhcc---chHHHHHHHHHHHHHHH
Confidence 78999999999999999999999995 455554443322 2335678888888888753 34467778888999999
Q ss_pred HHHHHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHH
Q 044773 160 LVSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLK 238 (289)
Q Consensus 160 l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~ 238 (289)
+.+.|+++ ++.+..+.+|+++|++++... .+..++...|++++||.+.||..|++..++++||+++. ++++++
T Consensus 319 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~ 392 (407)
T 3nra_A 319 LLHVLRGCEGVFARTPQAGSYLFPRLPKLA-----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAV 392 (407)
T ss_dssp HHHHHHTSTTCBCCCCSBSSEECCBCCCBS-----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHH
T ss_pred HHHHHhcCCCceeccCCeeEEEEEeCCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHH
Confidence 99999988 888888999999999987521 12246788887778999999999987778999999985 999999
Q ss_pred HHHHHHHHHHHHH
Q 044773 239 LSMQRLKAFVDSI 251 (289)
Q Consensus 239 ~~l~~l~~~l~~~ 251 (289)
+++++|++++++.
T Consensus 393 ~~~~~l~~~~~~~ 405 (407)
T 3nra_A 393 AAARRIVTLVERY 405 (407)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 23
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=6.3e-32 Score=245.50 Aligned_cols=226 Identities=22% Similarity=0.346 Sum_probs=183.8
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. ..++++++.|
T Consensus 166 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S 237 (410)
T 3e2y_A 166 SKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPG--------MWERTITIGS 237 (410)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT--------CGGGEEEEEE
T ss_pred CCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCC--------ccCeEEEEec
Confidence 47899999999999999999999999999999999999999999998887766666666532 4578999999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCC-----chHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSD-----KKFAQNYISENKKRLKQRHRKLVS 162 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~l~~ 162 (289)
|||.+|++|+|+||++++++ +.+.+.... ..+.++++.|.++..++++ ..+ .+++++.++.++++++++.+
T Consensus 238 ~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 315 (410)
T 3e2y_A 238 AGKTFSVTGWKLGWSIGPAH-LIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDP-ECYFNSLPKELEVKRDRMVR 315 (410)
T ss_dssp HHHHSSCGGGCCEEEECCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCceEEEEEECHH-HHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccch-HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999654 444444332 2344788999999888873 222 55678899999999999999
Q ss_pred HHHhcCCceecCCceEEEEEecCccccCC-----ChhhHHHHHHHHHHhcCeEEeCCCCCCCC-----CCCeEEEEEecC
Q 044773 163 GLEKAGISCLKSNAGLFCWVDMRHLLSSN-----TFEAEMELWKKIVYDVKLNISPGSSCHCT-----EPGWFRVCFANM 232 (289)
Q Consensus 163 ~l~~~g~~~~~~~~g~~~~i~~~~~~~~~-----~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----~~~~~Ris~~~~ 232 (289)
.|+++|+.+..+++|+++|+++....... ...+..+++..+++++||.+.||..|+.. +++++||+++.
T Consensus 316 ~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~- 394 (410)
T 3e2y_A 316 LLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK- 394 (410)
T ss_dssp HHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC-
T ss_pred HHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC-
Confidence 99999999999999999999987632210 01123467888888889999999988753 35899999985
Q ss_pred CHHHHHHHHHHHHH
Q 044773 233 SEDTLKLSMQRLKA 246 (289)
Q Consensus 233 ~~e~l~~~l~~l~~ 246 (289)
+++++++++++|++
T Consensus 395 ~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 395 KDSTLDAAEEIFRA 408 (410)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999975
No 24
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=7e-32 Score=245.60 Aligned_cols=219 Identities=15% Similarity=0.219 Sum_probs=170.2
Q ss_pred hHHHhhhCCCccEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCC--ccChhhhhhccccccC
Q 044773 2 YQLAQKRHLKVKGVLVTNP-SNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPG--FVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p-~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~--~~~~~~~~~~~~~~~~ 78 (289)
+++++...++++++++++| |||||.+++.+++++|+++|++++++||+||+|.++.+++.. ..++..+..
T Consensus 164 l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~------- 236 (405)
T 3k7y_A 164 FLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEE------- 236 (405)
T ss_dssp HHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHT-------
T ss_pred HHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHh-------
Confidence 4556665556788888776 999999999999999999999999999999999998765321 123333322
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEe--cCHHHHHHH----Hhc--cccCCCChHHHHHHHHHhCCchH---HHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYS--NDDTVVAAA----TKM--SSFGLVSSQTQYLLSALLSDKKF---AQNYIS 147 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~--~~~~~~~~~----~~~--~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~ 147 (289)
..+++++++||||+||++|+|+||+++ +++.+.+.+ ... ..+.+.+.+.|.+++.++.+..+ ..++++
T Consensus 237 -~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~ 315 (405)
T 3k7y_A 237 -KNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELS 315 (405)
T ss_dssp -TTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred -cCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 347899999999999999999999864 455443322 222 23344567999999999988532 155677
Q ss_pred HHHHHHHHHHHHHHHHHH----hcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC
Q 044773 148 ENKKRLKQRHRKLVSGLE----KAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC 219 (289)
Q Consensus 148 ~~~~~~~~~~~~l~~~l~----~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~ 219 (289)
+.++.++++++.+.+.|+ ++| |++.+|++|||+|+.++. +++..| +++||.+.|+.
T Consensus 316 ~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----------~~~~~L-~~~gV~v~p~~---- 379 (405)
T 3k7y_A 316 QLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----------KIAEHL-KTHHIYIINNG---- 379 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG-----------GGTTTT-TTTTEECCTTS----
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH-----------HHHHHH-HHCCEeecCCC----
Confidence 788889999999999999 776 688899999999988763 134556 79999999852
Q ss_pred CCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 220 TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 220 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
|||++..++++++.++++|++++++
T Consensus 380 ------Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 380 ------RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp ------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred ------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 9999877899999999999998763
No 25
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=4.5e-32 Score=246.27 Aligned_cols=223 Identities=21% Similarity=0.264 Sum_probs=175.2
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+-. ..+++++++|
T Consensus 162 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~s 233 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPD--------ARFCAIEINS 233 (400)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTT--------GGGTEEEEEE
T ss_pred cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCC--------CCCceEEEec
Confidence 47899999999999999999999999999999999999999999987665543345544410 2367899999
Q ss_pred CccccCCCCceEEEEEecCHH-------HHHHHH--hccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDT-------VVAAAT--KMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~-------~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 160 (289)
|||.+|++|+|+||++++++. +..... ....++++|++.|.++..+++.. ++++.++.++++++++
T Consensus 234 ~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~l 308 (400)
T 3asa_A 234 FSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-----PQLEAIHYYRENSDLL 308 (400)
T ss_dssp CCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHH
T ss_pred chhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHH
Confidence 999999999999999997765 343332 22234457889999988888754 3567788899999999
Q ss_pred HHHHHhcCCceecCCceEEEEEe-cCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHH
Q 044773 161 VSGLEKAGISCLKSNAGLFCWVD-MRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 239 (289)
Q Consensus 161 ~~~l~~~g~~~~~~~~g~~~~i~-~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~ 239 (289)
.+.|++.|+++.++.+|+++|++ ++...+. .+++..+++++||.+.||..|+..+++++||++. .+++++++
T Consensus 309 ~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~ 381 (400)
T 3asa_A 309 RKALLATGFEVFGGEHAPYLWVKPTQANISD------RDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILA 381 (400)
T ss_dssp HHHHHHTTCEEEECSSSSEEEEECCCTTCCT------TTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHH
T ss_pred HHHHHHCCCeeeCCCCceEEEEeccCCCCCH------HHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHH
Confidence 99999889988888888999999 7643322 2477778877899999999987655789999975 58999999
Q ss_pred HHHHHHHHHHHHH
Q 044773 240 SMQRLKAFVDSIT 252 (289)
Q Consensus 240 ~l~~l~~~l~~~~ 252 (289)
++++|++++++..
T Consensus 382 ~l~~l~~~~~~~~ 394 (400)
T 3asa_A 382 ACERLQMAPALQS 394 (400)
T ss_dssp HHHHHHC------
T ss_pred HHHHHHHHHHhhh
Confidence 9999999887654
No 26
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.98 E-value=1.8e-31 Score=241.47 Aligned_cols=226 Identities=15% Similarity=0.266 Sum_probs=180.5
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCC
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWN 82 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 82 (289)
++++.. ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.+........ ....+
T Consensus 162 ~~~~~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 235 (396)
T 3jtx_A 162 SEEVWK--RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQL----GRSRQ 235 (396)
T ss_dssp CHHHHH--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHT----TCCCT
T ss_pred HHhhcc--CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhc----ccccC
Confidence 444543 689999999999999999999999999999999999999999999877764444443322100 01257
Q ss_pred ceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Q 044773 83 RVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 83 ~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 160 (289)
+++++.||||.++++|+|+||++++ +.+.+.+..... .+.+|++.|.++..++.. .+++++.++.++++++.+
T Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l 310 (396)
T 3jtx_A 236 KLLMFTSLSKRSNVPGLRSGFVAGD-AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD----EQHVIDNRRLYQEKFERV 310 (396)
T ss_dssp TEEEEEESTTTSSCGGGCCEEEEEC-HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHH
T ss_pred cEEEEeccccccCCcccceEEEEeC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999995 455554443322 244788999999998886 345788899999999999
Q ss_pred HHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC------CCCCeEEEEEecCCH
Q 044773 161 VSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC------TEPGWFRVCFANMSE 234 (289)
Q Consensus 161 ~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~~~Ris~~~~~~ 234 (289)
.+.|.+. +.+..+.+|+++|++++.. +..+++..|++++||.+.||..|+. ..++++||+++. ++
T Consensus 311 ~~~l~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~ 381 (396)
T 3jtx_A 311 IPILQQV-FDVKLPDASFYIWLKVPDG-------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DV 381 (396)
T ss_dssp HHHHTTT-SCCCCCSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CH
T ss_pred HHHHHhc-CCccCCCeeEEEEEECCCC-------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CH
Confidence 9999886 5677888999999998751 2246888888888999999999885 346899999986 99
Q ss_pred HHHHHHHHHHHHHH
Q 044773 235 DTLKLSMQRLKAFV 248 (289)
Q Consensus 235 e~l~~~l~~l~~~l 248 (289)
+++++++++|++++
T Consensus 382 ~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 382 ATCVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 27
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.98 E-value=8.3e-32 Score=246.48 Aligned_cols=229 Identities=22% Similarity=0.353 Sum_probs=183.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+. +..++++++.|
T Consensus 181 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--------~~~~~~~~~~s 252 (429)
T 1yiz_A 181 EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP--------GMWERTITIGS 252 (429)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGST--------TTGGGEEEEEE
T ss_pred cCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhcc--------CCcCceEEEec
Confidence 4789999999999999999999999999999999999999999999887765555554441 13478999999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCC-----chHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSD-----KKFAQNYISENKKRLKQRHRKLVS 162 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~l~~ 162 (289)
+||.+|++|+|+||+++++ .+.+.+.... ..+..+++.|.++..+++. ..+ .+++++.++.++++++++.+
T Consensus 253 ~sK~~~~~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 330 (429)
T 1yiz_A 253 AGKTFSLTGWKIGWAYGPE-ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP-ECYFNSISGELMAKRDYMAS 330 (429)
T ss_dssp HHHHHTCGGGCCEEEESCH-HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHHHHHHH
T ss_pred chhccCCCCcceEEEEeCH-HHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccch-HHHHHHHHHHHHHHHHHHHH
Confidence 9999998999999999964 4555444332 2344788999998888876 433 56688899999999999999
Q ss_pred HHHhcCCceecCCceEEEEEecCcccc------CCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-----CCCeEEEEEec
Q 044773 163 GLEKAGISCLKSNAGLFCWVDMRHLLS------SNTFEAEMELWKKIVYDVKLNISPGSSCHCT-----EPGWFRVCFAN 231 (289)
Q Consensus 163 ~l~~~g~~~~~~~~g~~~~i~~~~~~~------~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----~~~~~Ris~~~ 231 (289)
.|.+.|+++..+.+|+++|++++.... .....+..+++..|++++||.+.||..|+.. .++++||+++.
T Consensus 331 ~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~ 410 (429)
T 1yiz_A 331 FLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK 410 (429)
T ss_dssp HHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS
T ss_pred HHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC
Confidence 999889998888889999999875310 0000233567888887889999999888642 26799999995
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 044773 232 MSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 232 ~~~e~l~~~l~~l~~~l~ 249 (289)
+++++++++++|+++++
T Consensus 411 -~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 411 -KDENLQKAAEILRKWKG 427 (429)
T ss_dssp -CHHHHHHHHHHHHHHSC
T ss_pred -CHHHHHHHHHHHHHhcc
Confidence 89999999999988754
No 28
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.98 E-value=3.9e-31 Score=238.99 Aligned_cols=229 Identities=16% Similarity=0.231 Sum_probs=183.5
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++... ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..+.+ ..
T Consensus 154 l~~~l~~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~ 224 (390)
T 1d2f_A 154 LEAVLAKP-ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVAR--------GD 224 (390)
T ss_dssp HHHHHTST-TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCC--------SS
T ss_pred HHHHhccC-CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcch--------hh
Confidence 34555432 6899999999999999999999999999999999999999999998777665556555521 11
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc----ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS----SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
... +.|+||.+|++|+|+||++++++.+.+.+.... .++..+++.+.++..+++.. .+++++.++.+++++
T Consensus 225 -~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~ 299 (390)
T 1d2f_A 225 -WAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG---APWLDALRIYLKDNL 299 (390)
T ss_dssp -EEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH
T ss_pred -Hhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH
Confidence 123 999999999999999999997666655554432 34457888888888888742 556888899999999
Q ss_pred HHHHHHHHh-c-CCceecCCceEEEEEecCcc-ccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCH
Q 044773 158 RKLVSGLEK-A-GISCLKSNAGLFCWVDMRHL-LSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSE 234 (289)
Q Consensus 158 ~~l~~~l~~-~-g~~~~~~~~g~~~~i~~~~~-~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~ 234 (289)
+.+.+.|++ + |+++.++.+++++|++++.. .+ ..++...|++++||.+.||..|+...++++||+++. ++
T Consensus 300 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~ 372 (390)
T 1d2f_A 300 TYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNID------DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PR 372 (390)
T ss_dssp HHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCC------HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CH
T ss_pred HHHHHHHHhhCCCCEEecCCccEEEEEEccccCCC------HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CH
Confidence 999999998 5 88888899999999998753 22 246788887678999999999875556899999986 78
Q ss_pred HHHHHHHHHHHHHHHHH
Q 044773 235 DTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 235 e~l~~~l~~l~~~l~~~ 251 (289)
+++++++++|++++++.
T Consensus 373 ~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 373 SKLEKGVAGLINAIRAV 389 (390)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988754
No 29
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.98 E-value=3.1e-31 Score=242.97 Aligned_cols=228 Identities=20% Similarity=0.333 Sum_probs=186.0
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++..+.++..+. ....+++++|
T Consensus 190 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~---------~~~~vi~~~S 260 (427)
T 3dyd_A 190 EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLS---------TDVPILSCGG 260 (427)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGC---------SSCCEEEEEE
T ss_pred cCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhC---------CCCcEEEEee
Confidence 3689999999999999999999999999999999999999999999888776666666552 3356888999
Q ss_pred CccccCCCCceEEEEEecC------HHHHHHHHhcc-ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSND------DTVVAAATKMS-SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVS 162 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~------~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (289)
|||.|+++|+|+||+++++ +.+.+.+.... ..+.++++.|.++..+++... .+++++.++.++++++.+.+
T Consensus 261 ~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~--~~~~~~~~~~~~~~~~~l~~ 338 (427)
T 3dyd_A 261 LAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTP--GEFYHNTLSFLKSNADLCYG 338 (427)
T ss_dssp STTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999975 34554444332 245588899999999998432 55678888999999999999
Q ss_pred HHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHH
Q 044773 163 GLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSM 241 (289)
Q Consensus 163 ~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l 241 (289)
.|+++ |+.+..|++|+|+|+.++...-. ...+..+++..|++++||.+.||..|+. ++++||+++ ++++++++++
T Consensus 339 ~L~~~~g~~~~~p~~g~~~~~~l~~~~~~-~~~~~~~~~~~l~~~~gV~v~~g~~~~~--~~~iRis~~-~~~e~i~~~l 414 (427)
T 3dyd_A 339 ALAAIPGLRPVRPSGAMYLMVGIEMEHFP-EFENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVIT-VPEVMMLEAC 414 (427)
T ss_dssp HHHHSTTEEEECCSBTTEEEEEECGGGCT-TCSSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEESC-SCHHHHHHHH
T ss_pred HHhcCCCceecCCCeeEEEEEecCHhhcC-CCCCHHHHHHHHHHHCCEEEECCcccCC--CCeEEEEEC-CCHHHHHHHH
Confidence 99998 88888899999999988732110 0022356888888788999999998874 689999998 5999999999
Q ss_pred HHHHHHHHHHH
Q 044773 242 QRLKAFVDSIT 252 (289)
Q Consensus 242 ~~l~~~l~~~~ 252 (289)
++|++++++..
T Consensus 415 ~~l~~~l~~~~ 425 (427)
T 3dyd_A 415 SRIQEFCEQHY 425 (427)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999987653
No 30
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.98 E-value=3.1e-31 Score=249.96 Aligned_cols=228 Identities=20% Similarity=0.324 Sum_probs=174.4
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHH--HHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFI--TEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~--~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
+++++|+++|||||||.+++.+++++|+++| ++++++||+||+|.++.++ +.++.+. ..++++++
T Consensus 244 ~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~----------~~~~~i~~ 310 (546)
T 2zy4_A 244 PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAI----------CPENTLLV 310 (546)
T ss_dssp TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHH----------CGGGEEEE
T ss_pred CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHh----------CCCCEEEE
Confidence 5789999999999999999999999999999 7899999999999987542 3455554 23689999
Q ss_pred ecCccccCCCCceEEEEEecCHHHHHHH-Hh------------c-------------------------cccCCCChHHH
Q 044773 88 YSLSKDLGLPGFRVGAIYSNDDTVVAAA-TK------------M-------------------------SSFGLVSSQTQ 129 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~i~~~~~~~~~~~-~~------------~-------------------------~~~~~~~~~~q 129 (289)
+||||.+|++|+|+||++++++.+.+.+ .. + .....++.+.|
T Consensus 311 ~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 390 (546)
T 2zy4_A 311 YSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQ 390 (546)
T ss_dssp EESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHH
T ss_pred EeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHH
Confidence 9999999999999999999775333332 11 0 11224677777
Q ss_pred HHH-----HHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCccc---cCCCh-------h
Q 044773 130 YLL-----SALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLL---SSNTF-------E 194 (289)
Q Consensus 130 ~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~---~~~~~-------~ 194 (289)
.++ ++++.+. +.+.++.++.++++++.+.+.|. .++.+.++++|||+|++++... ....+ .
T Consensus 391 ~a~a~~a~~all~~~---~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~ 466 (546)
T 2zy4_A 391 VQMALFSLFALMDEA---DEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQS 466 (546)
T ss_dssp HHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccC
Confidence 764 3455543 45678888999999999999996 5666678899999999986421 00000 0
Q ss_pred hHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHhh
Q 044773 195 AEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTL 255 (289)
Q Consensus 195 ~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~~~ 255 (289)
+..+++..+++++||.+.||..|+. +++++||+++..+++++++++++|+++++++....
T Consensus 467 ~~~~~l~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~~ 526 (546)
T 2zy4_A 467 STGDMLFRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYEYAAIGRALRKMADELYAEY 526 (546)
T ss_dssp CHHHHHHHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1124455667788999999999986 56899999986689999999999999998877544
No 31
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.98 E-value=6.9e-31 Score=238.05 Aligned_cols=233 Identities=17% Similarity=0.337 Sum_probs=185.4
Q ss_pred hHHHhhhCCCccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGV-LVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i-~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++... ++++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+..+. .
T Consensus 154 l~~~l~~~-~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~------~ 226 (397)
T 2zyj_A 154 LEEVLKRE-RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREA------G 226 (397)
T ss_dssp HHHHHHHC-CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHH------T
T ss_pred HHHHHhhc-CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCccc------C
Confidence 45555543 67887 5799999999999999999999999999999999999999877666556666652200 0
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
.+++++++|+||.+| +|+|+||++++ +.+.+.+.... .....|++.|.++..+++...+ +++++.++.++++++
T Consensus 227 ~~~~i~~~s~sK~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~ 302 (397)
T 2zyj_A 227 YPGVIYLGSFSKVLS-PGLRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFS--ERLERVRRVYREKAQ 302 (397)
T ss_dssp CCCEEEEEESTTTTC-GGGCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHH--HHHHHHHHHHHHHHH
T ss_pred CCeEEEEeccccccc-ccceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHH
Confidence 167899999999999 99999999996 44554444322 1233688999999999987642 668889999999999
Q ss_pred HHHHHHHhc---CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEEecCC
Q 044773 159 KLVSGLEKA---GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCFANMS 233 (289)
Q Consensus 159 ~l~~~l~~~---g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~--~~~~~Ris~~~~~ 233 (289)
++.+.|++. |+++..+.+|+++|++++...+ ..++...|+++ ||.+.||..|+.. .++++||+++..+
T Consensus 303 ~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~ 375 (397)
T 2zyj_A 303 AMLHALDREVPKEVRYTRPKGGMFVWMELPKGLS------AEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSYATLD 375 (397)
T ss_dssp HHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCC------HHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEECSSSC
T ss_pred HHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCC------HHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEcCCCC
Confidence 999999885 6888788889999999875322 24678887755 9999999988653 4689999998667
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 044773 234 EDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 234 ~e~l~~~l~~l~~~l~~~~ 252 (289)
++++++++++|++++++..
T Consensus 376 ~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 376 REGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987754
No 32
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.98 E-value=4.3e-31 Score=241.89 Aligned_cols=228 Identities=18% Similarity=0.231 Sum_probs=183.1
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH-----cCCEEEEecCCCCCccCCCCccChh-hhhhccc
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITE-----KNIHLISDEIYSGTVFSSPGFVSIM-EILKDRN 74 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~-----~~~~li~Dea~~~~~~~~~~~~~~~-~~~~~~~ 74 (289)
+++++... .+++++++++||||||.+++.+++++|+++|++ +|+++|+||+|.++.+++....++. .+..
T Consensus 179 l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--- 255 (430)
T 2x5f_A 179 LVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTN--- 255 (430)
T ss_dssp HHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHT---
T ss_pred HHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhh---
Confidence 34555542 268999999999999999999999999999999 9999999999999877665455655 4421
Q ss_pred cccCCCCCc---eEEEecCccccCCCCceEEEEEe--cCHHHHHHHHhcc------ccCCCChHHHHHHHHHhC-CchHH
Q 044773 75 CENTEVWNR---VHIVYSLSKDLGLPGFRVGAIYS--NDDTVVAAATKMS------SFGLVSSQTQYLLSALLS-DKKFA 142 (289)
Q Consensus 75 ~~~~d~~~~---~i~i~s~sK~~g~~G~r~G~i~~--~~~~~~~~~~~~~------~~~~~~~~~q~~~~~~l~-~~~~~ 142 (289)
..++ +++++|+||.+|++|+|+||+++ +++.+.+.+.... ..+.+|++.|.++..+++ ...+
T Consensus 256 -----~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~- 329 (430)
T 2x5f_A 256 -----LHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQF- 329 (430)
T ss_dssp -----TCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHH-
T ss_pred -----ccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHH-
Confidence 2466 89999999999989999999999 2344444443322 234588899999999998 8766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----hcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC
Q 044773 143 QNYISENKKRLKQRHRKLVSGLE----KAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH 218 (289)
Q Consensus 143 ~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~ 218 (289)
.+.+++.++.++++++.+.+.|+ +.|+++.++++|+|+|++++ .. +..+++..|++++||.+.||
T Consensus 330 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~~------~~~~~~~~l~~~~gi~v~~g---- 398 (430)
T 2x5f_A 330 DKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH-DV------DPEALRKHLIDKYSIGVIAL---- 398 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEES-SS------CHHHHHHHHHHHHCEECEEC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCC-CC------CHHHHHHHHHHhCCEEEecC----
Confidence 56677799999999999999998 56888888999999999987 22 22468888886589999997
Q ss_pred CCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHH
Q 044773 219 CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 219 ~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 251 (289)
.++++||+++..+++++++++++|++++++.
T Consensus 399 --~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 399 --NATDIRIAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp --SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred --CCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 3579999998558999999999999988754
No 33
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.98 E-value=8.1e-31 Score=238.12 Aligned_cols=232 Identities=19% Similarity=0.281 Sum_probs=186.3
Q ss_pred hHHHhh----hCCCccEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccc
Q 044773 2 YQLAQK----RHLKVKGV-LVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCE 76 (289)
Q Consensus 2 l~~~~~----~~~~~~~i-~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~ 76 (289)
+++++. ..+++++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+
T Consensus 161 l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~------- 233 (407)
T 2zc0_A 161 LEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKAL------- 233 (407)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGG-------
T ss_pred HHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhc-------
Confidence 445555 43478887 578999999999999999999999999999999999999887766555555555
Q ss_pred cCCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcccc--CCCChHHHHHHHHHhCCchHHH-HHHHHHHHHH
Q 044773 77 NTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFAQ-NYISENKKRL 153 (289)
Q Consensus 77 ~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~-~~~~~~~~~~ 153 (289)
+..+++++++||||.+| +|+|+||++++ +.+.+.+...... ...+++.|.++..+++...+ . +++++.++.+
T Consensus 234 --~~~~~~i~~~s~sK~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 308 (407)
T 2zc0_A 234 --DNEGRVIVAGTLSKVLG-TGFRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYF-EKYHLEGALLGY 308 (407)
T ss_dssp --CSSCCEEEEEESTTTTC-TTSCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHH-HHHTTTTHHHHH
T ss_pred --CCCCCEEEEcccccccC-CCcceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCc-hHHHHHHHHHHH
Confidence 23468899999999999 99999999996 5555555433222 33688999999999987644 5 6788889999
Q ss_pred HHHHHHHHHHHHhc--CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEE
Q 044773 154 KQRHRKLVSGLEKA--GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCF 229 (289)
Q Consensus 154 ~~~~~~l~~~l~~~--g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~--~~~~~Ris~ 229 (289)
+++++++.+.|++. ++++..+.+|+++|++++...+ ..++...|++++||.+.||..|+.. .++++||++
T Consensus 309 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~ 382 (407)
T 2zc0_A 309 KEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGAD------GISFANELMEREGVVVVPGKPFYTDESGKNAIRLNF 382 (407)
T ss_dssp HHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCC------HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCC------HHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEe
Confidence 99999999999875 6777778889999999875322 2568888886779999999988653 468999999
Q ss_pred ecCCHHHHHHHHHHHHHHHHHH
Q 044773 230 ANMSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 230 ~~~~~e~l~~~l~~l~~~l~~~ 251 (289)
+..+++++++++++|++++++.
T Consensus 383 ~~~~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 383 SRPSKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp SSSCTTHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 7557899999999999998765
No 34
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.98 E-value=1.9e-31 Score=240.81 Aligned_cols=220 Identities=23% Similarity=0.323 Sum_probs=178.4
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. ..+++++++|
T Consensus 162 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~~~~i~~~s 233 (386)
T 1u08_A 162 ERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQ--------LRERAVAVSS 233 (386)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHH--------HHTTEEEEEE
T ss_pred ccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccC--------ccCcEEEEec
Confidence 47899999999999999999999999999999999999999999998776655455544421 2378899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++ +.+.+.+.... ..+..+++.|.++..+++.. .+++++.+++++++++++.+.|++.
T Consensus 234 ~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T 1u08_A 234 FGKTYHMTGWKVGYCVAP-APISAEIRKVHQYLTFSVNTPAQLALADMLRAE---PEHYLALPDFYRQKRDILVNALNES 309 (386)
T ss_dssp HHHHTTCGGGCCEEEECC-HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC---THHHHTHHHHHHHHHHHHHHHTTSS
T ss_pred chhhcCCcccceEEEEcC-HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999899999999996 44555444332 23447888898888888753 4567888999999999999999988
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC--CCCCeEEEEEecCCHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFANMSEDTLKLSMQRLK 245 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~~~Ris~~~~~~e~l~~~l~~l~ 245 (289)
|+++..+++|+++|++++.... .+..+++..+++++||.+.||..|+. ..++++||+++. +++++++++++|+
T Consensus 310 g~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~ 384 (386)
T 1u08_A 310 RLEILPCEGTYFLLVDYSAVST----LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLR 384 (386)
T ss_dssp SCEECCCCBSSEEEEECTTTCC----SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHT
T ss_pred CCeecCCCceEEEEEecCCCCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHh
Confidence 9998888889999999875310 12246778788788999999988864 246899999985 8999999999986
Q ss_pred H
Q 044773 246 A 246 (289)
Q Consensus 246 ~ 246 (289)
+
T Consensus 385 ~ 385 (386)
T 1u08_A 385 Q 385 (386)
T ss_dssp T
T ss_pred h
Confidence 4
No 35
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.97 E-value=1.9e-31 Score=239.95 Aligned_cols=217 Identities=18% Similarity=0.297 Sum_probs=176.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++.+... ..+++++++|
T Consensus 157 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~--------~~~~~i~~~s 227 (376)
T 2dou_A 157 REAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE-APSPLALPG--------AKERVVELFS 227 (376)
T ss_dssp HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC-CCCGGGSTT--------GGGTEEEEEE
T ss_pred cCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCC--------CCCcEEEEec
Confidence 3589999999999999999999999999999999999999999998876552 334443321 3467899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++ +.+.+.+..... ..+.+++.|.++..+++.. .+++++.++.++++++++.+.|+++
T Consensus 228 ~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (376)
T 2dou_A 228 LSKSYNLAGFRLGFALGS-EEALARLERVKGVIDFNQYAGVLRMGVEALKTP---KEVVRGYARVYRERALGMAEALKGV 303 (376)
T ss_dssp HHHHHTCGGGCCEEEEEC-HHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred chhhcCChhheeEEEecC-HHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999899999999995 445544443322 2346889999999999873 5678889999999999999999988
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
+++.++.+|+++|++++...+ ..++...|+++ ||.+.||..|+...++++||+++. +++++++++++|+++
T Consensus 304 -~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 304 -LSLLPPRATMYLWGRLPEGVD------DLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREA 374 (376)
T ss_dssp -SEECCCCBSSEEEEECCTTCC------HHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHT
T ss_pred -cCccCCCeeEEEEEECCCCCC------HHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 888888889999999875322 24678888755 999999998875557899999985 899999999999876
Q ss_pred H
Q 044773 248 V 248 (289)
Q Consensus 248 l 248 (289)
+
T Consensus 375 l 375 (376)
T 2dou_A 375 L 375 (376)
T ss_dssp C
T ss_pred h
Confidence 4
No 36
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=5.1e-31 Score=240.05 Aligned_cols=226 Identities=19% Similarity=0.313 Sum_probs=180.1
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. ..++++++.|
T Consensus 159 ~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~~~~i~~~s 230 (411)
T 2o0r_A 159 PRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDG--------MAERTITISS 230 (411)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTT--------TGGGEEEEEE
T ss_pred cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccC--------CCCCEEEEee
Confidence 47899999999999999999999999999999999999999999988776655555554411 2478899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++ +.+.+.+..... .+..+++.|.++..+++.. .+++++.++.++++++++.+.|++.
T Consensus 231 ~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 306 (411)
T 2o0r_A 231 AAKMFNCTGWKIGWACGP-AELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---DAWVAALRNSLRARRDRLAAGLTEI 306 (411)
T ss_dssp HHHHTTCTTTCEEEEECC-HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCccceEEEEeeC-HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999995 555554443322 2346778888888888643 5668888999999999999999988
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC-C----------CCCeEEEEEecCCHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC-T----------EPGWFRVCFANMSEDT 236 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~----------~~~~~Ris~~~~~~e~ 236 (289)
|+++.++++|+++|++++... . .+..+++..+++++||.+.||..|.. . +++++||+++. ++++
T Consensus 307 g~~~~~~~~g~~~~~~~~~~~-~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~ 381 (411)
T 2o0r_A 307 GFAVHDSYGTYFLCADPRPLG-Y---DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDT 381 (411)
T ss_dssp TCEECCCCBSSEEEEECGGGT-C---CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHH
T ss_pred CCEecCCCeeEEEEEecCCCC-C---CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHH
Confidence 999888899999999987521 0 12246788888778999999988843 2 35789999985 8999
Q ss_pred HHHHHHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFVDSIT 252 (289)
Q Consensus 237 l~~~l~~l~~~l~~~~ 252 (289)
+++++++|++++++..
T Consensus 382 i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 382 LDEAIRRLSVLAERPA 397 (411)
T ss_dssp HHHHHHHHGGGGC---
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999988776543
No 37
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.97 E-value=2.2e-30 Score=234.22 Aligned_cols=220 Identities=22% Similarity=0.410 Sum_probs=179.4
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecC
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSL 90 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~ 90 (289)
++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. .+..++ .+++++++|+
T Consensus 161 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~-----------~~~~i~~~s~ 228 (391)
T 3h14_A 161 DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKA-VTALEL-----------TDECYVINSF 228 (391)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC-CCGGGT-----------CSSSEEEEES
T ss_pred CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCC-cChhhc-----------CCCEEEEEec
Confidence 7899999999999999999999999999999999999999999988776542 333322 3678999999
Q ss_pred ccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 044773 91 SKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKAG 168 (289)
Q Consensus 91 sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 168 (289)
||.+|++|+|+||++++++. .+.+..... .++.+++.|.++.+++.. .+++++.++.++++++.+.+.|++++
T Consensus 229 sK~~g~~G~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~ 303 (391)
T 3h14_A 229 SKYFSMTGWRVGWMVVPEDQ-VRVVERIAQNMFICAPHASQVAALAALDC----DAELQANLDVYKANRKLMLERLPKAG 303 (391)
T ss_dssp SSTTCCTTSCCEEEECCGGG-HHHHHHHHHHTTCCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCCccceeEEEEeCHHH-HHHHHHHHhhhccCCCHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999996654 444433322 234778899988888873 56788899999999999999999887
Q ss_pred Cce-ecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEEecCCHHHHHHHHHHHHH
Q 044773 169 ISC-LKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFANMSEDTLKLSMQRLKA 246 (289)
Q Consensus 169 ~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~~~Ris~~~~~~e~l~~~l~~l~~ 246 (289)
+.. ..+.+++++|++++... .+..+++..+++++||.+.||..|+. ..++++||+++. +++++++++++|++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~ 377 (391)
T 3h14_A 304 FTRIAPPDGAFYVYADVSDLT-----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEA 377 (391)
T ss_dssp CCCBCCCCBTTEEEEECTTTC-----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHH
T ss_pred CCcccCCCeeEEEEEecCccC-----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 654 57888899999987521 12256888888778999999999987 457899999986 88999999999999
Q ss_pred HHHHHHH
Q 044773 247 FVDSITT 253 (289)
Q Consensus 247 ~l~~~~~ 253 (289)
++++...
T Consensus 378 ~~~~~~~ 384 (391)
T 3h14_A 378 FMQARGE 384 (391)
T ss_dssp HHHHC--
T ss_pred HHHHhcc
Confidence 9887654
No 38
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.97 E-value=2e-30 Score=237.22 Aligned_cols=234 Identities=18% Similarity=0.162 Sum_probs=178.1
Q ss_pred hHHHhhhCCCccEEE-EeCCCCCCccCCCHHHHHHHHHHHH-HcCCEEEEecCCCCCccC--CCCccChhhhhhcccccc
Q 044773 2 YQLAQKRHLKVKGVL-VTNPSNPLGTTMSRNELNLLVNFIT-EKNIHLISDEIYSGTVFS--SPGFVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~~~~~~~~i~-l~~p~NPtG~~~~~~~l~~l~~~~~-~~~~~li~Dea~~~~~~~--~~~~~~~~~~~~~~~~~~ 77 (289)
++++++. .++++|+ +++||||||.+++.+++++|+++|+ ++++++|+||+|....+. +....++.++....
T Consensus 170 l~~~l~~-~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~---- 244 (422)
T 3d6k_A 170 VRELVKD-PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA---- 244 (422)
T ss_dssp HHHHHTS-TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT----
T ss_pred HHHHHhc-CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhcc----
Confidence 3444543 2689887 7899999999999999999999999 999999999999863333 33344554432110
Q ss_pred CCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCC-chHHHHHHHHHHHHHH
Q 044773 78 TEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSD-KKFAQNYISENKKRLK 154 (289)
Q Consensus 78 ~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~ 154 (289)
+..+++++++||||. +++|+|+||++++ +.+.+.+..... .++++++.|.++..++++ +.+ .+++++.++.++
T Consensus 245 -~~~~~~i~~~S~SK~-~~~GlriG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~-~~~~~~~~~~~~ 320 (422)
T 3d6k_A 245 -GNPNRFWFMSSTSKI-THAGSGVSFFASS-KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGL-KAHMLKHAASLA 320 (422)
T ss_dssp -TCTTCEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH-HHHHHHHHHHHH
T ss_pred -CCCCcEEEEcChhhh-cCcccceEEEEeC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchH-HHHHHHHHHHHH
Confidence 245789999999999 6699999999996 445554443322 244788999999999998 555 788999999999
Q ss_pred HHHHHHHHHHHh----cC-CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC-CCCCCC---CCCCeE
Q 044773 155 QRHRKLVSGLEK----AG-ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP-GSSCHC---TEPGWF 225 (289)
Q Consensus 155 ~~~~~l~~~l~~----~g-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~---~~~~~~ 225 (289)
++++.+.+.|.+ .| +.+..|++|+|+|++++.. +...+.. +++++||.+.| |..|+. ..++++
T Consensus 321 ~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~-~l~~~gV~v~~~g~~f~~~~~~~~~~i 392 (422)
T 3d6k_A 321 PKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG-------TASRVVE-LAKEAGIALTGAGSSFPLHNDPNNENI 392 (422)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT-------CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEE
T ss_pred HHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC-------CHHHHHH-HHHHCCeEEEcCccccCCCCCCCCCeE
Confidence 999999888875 33 5667888999999999753 1123444 55688999999 555641 236899
Q ss_pred EEEEecCCHHHHHHHHHHHHHHHHHHH
Q 044773 226 RVCFANMSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 226 Ris~~~~~~e~l~~~l~~l~~~l~~~~ 252 (289)
||+++.++++++++++++|++++++..
T Consensus 393 Ris~~~~~~e~i~~~~~~l~~~l~~~~ 419 (422)
T 3d6k_A 393 RLAPSLPPVAELEVAMDGFATCVLMAA 419 (422)
T ss_dssp EECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999985689999999999999988764
No 39
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.97 E-value=1.2e-30 Score=237.64 Aligned_cols=228 Identities=23% Similarity=0.386 Sum_probs=179.6
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCC----CccChhhhhhccccccCCCCCceE
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSP----GFVSIMEILKDRNCENTEVWNRVH 85 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~i 85 (289)
++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ +..++++
T Consensus 176 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~---------~~~~~~i 246 (416)
T 1bw0_A 176 DKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF---------ETTVPRV 246 (416)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS---------CCSCCEE
T ss_pred cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHc---------cCCCcEE
Confidence 4688999999999999999999999999999999999999999999877665 34444443 2335689
Q ss_pred EEecCccccCCCCceEEEEEecCH-----HHHHHHHhcc-ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 86 IVYSLSKDLGLPGFRVGAIYSNDD-----TVVAAATKMS-SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 86 ~i~s~sK~~g~~G~r~G~i~~~~~-----~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
+++|+||.++++|+|+||++++++ .+........ ..+..|++.|.++..+++... ..++++.++++++++++
T Consensus 247 ~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~ 324 (416)
T 1bw0_A 247 ILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP--QEHLDQIVAKIEESAMY 324 (416)
T ss_dssp EEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC--HHHHHHHHHHHHHHHHH
T ss_pred EEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHH
Confidence 999999999889999999999774 2222222221 234578899999999988532 55678888999999999
Q ss_pred HHHHHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHH
Q 044773 160 LVSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLK 238 (289)
Q Consensus 160 l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~ 238 (289)
+.+.|+++ |+.+..+.+|+|+|++++...-.. ..+..+++..+++++||.+.||..|+. ++++||+++ .++++++
T Consensus 325 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~-~~~e~l~ 400 (416)
T 1bw0_A 325 LYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRD-IKTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLTTT-RPVEVYR 400 (416)
T ss_dssp HHHHHTTSTTEEECCCCBTTEEEEEECGGGBSS-CCSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECC-SCHHHHH
T ss_pred HHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCC-CCCHHHHHHHHHHHCCEEEecccccCC--CCeEEEEec-CCHHHHH
Confidence 99999987 888877888899998886421000 012346778887788999999998874 579999997 5899999
Q ss_pred HHHHHHHHHHHHHH
Q 044773 239 LSMQRLKAFVDSIT 252 (289)
Q Consensus 239 ~~l~~l~~~l~~~~ 252 (289)
+++++|.+++++..
T Consensus 401 ~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 401 EAVERIKAFCQRHA 414 (416)
T ss_dssp HHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999987643
No 40
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.97 E-value=1.1e-30 Score=235.74 Aligned_cols=223 Identities=23% Similarity=0.423 Sum_probs=180.5
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+..+ ..++++++.|
T Consensus 162 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~s 234 (388)
T 1j32_A 162 PKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPE-------AYERSVVCSG 234 (388)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHH-------HHHTEEEEEE
T ss_pred cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHcccc-------ccCCEEEEee
Confidence 468999999999999999999999999999999999999999999987766555565555221 1467899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++++ +.+.+..... ...++++.|.++..+++.. .+++++.++.++++++++.+.|++.
T Consensus 235 ~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (388)
T 1j32_A 235 FAKTYAMTGWRVGFLAGPVP-LVKAATKIQGHSTSNVCTFAQYGAIAAYENS---QDCVQEMLAAFAERRRYMLDALNAM 310 (388)
T ss_dssp STTTTTCTTTCCEEEECCHH-HHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred chhccCCcccceEEEEeCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999989999999999654 5444443322 2347788888888888743 4557888899999999999999988
Q ss_pred -CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHH
Q 044773 168 -GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 246 (289)
Q Consensus 168 -g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 246 (289)
|+++..+.+++++|++++.. . .+..+++..|++++||.+.||..|+. ++++||+++ ++++++++++++|++
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~i~~~~~~l~~ 382 (388)
T 1j32_A 311 PGLECPKPDGAFYMFPSIAKT-G----RSSLDFCSELLDQHQVATVPGAAFGA--DDCIRLSYA-TDLDTIKRGMERLEK 382 (388)
T ss_dssp TTCBCCCCCBTTEECCBCGGG-T----CCHHHHHHHHHHHHCEECEEGGGGTC--TTBEEEECC-SCHHHHHHHHHHHHH
T ss_pred CCCcccCCCeeEEEEEecCCC-C----CCHHHHHHHHHHhCCEEEeChhhhCC--CCcEEEEec-CCHHHHHHHHHHHHH
Confidence 88888889999999887642 0 12246888887668999999998864 579999998 599999999999999
Q ss_pred HHHHH
Q 044773 247 FVDSI 251 (289)
Q Consensus 247 ~l~~~ 251 (289)
++++.
T Consensus 383 ~l~~~ 387 (388)
T 1j32_A 383 FLHGI 387 (388)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88653
No 41
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=4.8e-30 Score=233.56 Aligned_cols=228 Identities=20% Similarity=0.315 Sum_probs=182.9
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++. +++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++ ...+. +. +..
T Consensus 167 l~~~l~--~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~---~~-------~~~ 233 (409)
T 2gb3_A 167 LESFIN--ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASA---LS-------IES 233 (409)
T ss_dssp GGGGCC--TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCG---GG-------SCC
T ss_pred HHHhhC--cCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCc---cc-------cCC
Confidence 344443 368999999999999999999999999999999999999999999877655 22332 11 123
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccC-CCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFG-LVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 160 (289)
+++++++|+||.+|++|+|+||++++++.+.+.+......+ ..+++.|.++..+++.. ..++++.++.++++++++
T Consensus 234 ~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l 310 (409)
T 2gb3_A 234 DKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD---DSFFDFVRETYRERVETV 310 (409)
T ss_dssp TTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999998735555444433222 57889999999999763 556888899999999999
Q ss_pred HHHHHhcCCce-ecCCceEEEEEecCccccCCChhhHHHHHHHHHHh-----cCeEEeCCCCCCC---CCCCeEEEEEec
Q 044773 161 VSGLEKAGISC-LKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYD-----VKLNISPGSSCHC---TEPGWFRVCFAN 231 (289)
Q Consensus 161 ~~~l~~~g~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~pg~~f~~---~~~~~~Ris~~~ 231 (289)
.+.|++.|+++ ..+.+|+++|++++ .. +..+++..|+++ +||.+.||..|+. .+++++||+++
T Consensus 311 ~~~L~~~g~~~~~~~~~~~~~~~~~~-~~------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~- 382 (409)
T 2gb3_A 311 LKKLEEHGLKRFTKPSGAFYITAELP-VE------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV- 382 (409)
T ss_dssp HHHHHHTTCCCBCCCSBSSEEEEECS-SS------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-
T ss_pred HHHHHHcCceeeeCCCeeEEEEEEeC-CC------CHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-
Confidence 99999888888 77888999999886 11 224678888766 5999999988865 24689999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q 044773 232 MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 232 ~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
++++++++++++|++++++...
T Consensus 383 ~~~e~i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 383 LEKDLLSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHhhh
Confidence 6999999999999999887643
No 42
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.97 E-value=1.4e-30 Score=236.77 Aligned_cols=223 Identities=24% Similarity=0.355 Sum_probs=179.1
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCc-eEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNR-VHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~i~i~ 88 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.++ ....++..+ + .++ +++++
T Consensus 173 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~---------~-~~~~~i~~~ 241 (406)
T 1xi9_A 173 DRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYE-GEHISPGSL---------T-KDVPVIVMN 241 (406)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSS-SCCCCHHHH---------C-SSSCEEEEE
T ss_pred cCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccC-CCCCCHHHc---------C-CCceEEEEe
Confidence 36899999999999999999999999999999999999999999988763 333455554 2 467 89999
Q ss_pred cCccccCCCCceEEEEE--ecCH---HHHHHHHhcccc-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIY--SNDD---TVVAAATKMSSF-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVS 162 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~--~~~~---~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (289)
|+||.+|++|+|+||++ +++. .+.+.+...... +..+++.|.++..+++.. .+++++.++.++++++++.+
T Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~ 318 (406)
T 1xi9_A 242 GLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP---MDYLKEYMKKLKERRDYIYK 318 (406)
T ss_dssp ESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC---CHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHH
Confidence 99999998999999999 7651 444444333222 457889999999998643 23478888999999999999
Q ss_pred HHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHH
Q 044773 163 GLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSM 241 (289)
Q Consensus 163 ~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l 241 (289)
.|++. ++++..+++|+++|++++.... .+..+++..+++++||.+.||..|+..+++++||+++ ++++++++++
T Consensus 319 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~ 393 (406)
T 1xi9_A 319 RLNEIPGISTTKPQGAFYIFPKIEVGPW----KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAM 393 (406)
T ss_dssp HHHTSTTEECCCCCBSSEECCEECSCSC----SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHH
T ss_pred HHHhCCCCeeecCCeeEEEEEecCccCC----CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHH
Confidence 99988 8888888889999988864211 1224677888767899999999887655689999999 6999999999
Q ss_pred HHHHHHHHHH
Q 044773 242 QRLKAFVDSI 251 (289)
Q Consensus 242 ~~l~~~l~~~ 251 (289)
++|++++++.
T Consensus 394 ~~l~~~l~~~ 403 (406)
T 1xi9_A 394 DRFEKFMKER 403 (406)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 43
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.97 E-value=3e-30 Score=236.18 Aligned_cols=235 Identities=17% Similarity=0.120 Sum_probs=182.0
Q ss_pred hHHHhhhCCCccEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEecCCCCCccCCCC--ccChhhhhhcccccc
Q 044773 2 YQLAQKRHLKVKGVLVT-NPSNPLGTTMSRNELNLLVNFI-TEKNIHLISDEIYSGTVFSSPG--FVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~~-~~~~~~li~Dea~~~~~~~~~~--~~~~~~~~~~~~~~~ 77 (289)
++++++ .+++++|+++ +||||||.+++.+++++|+++| +++|+++|+||+|.++.|.+.. ..++.++....
T Consensus 172 l~~~l~-~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~---- 246 (427)
T 3ppl_A 172 VEELVK-NPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAA---- 246 (427)
T ss_dssp HHHHTT-STTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT----
T ss_pred HHHHHh-cCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhcc----
Confidence 344442 3578988755 7799999999999999999999 9999999999999987776543 33555553110
Q ss_pred CCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Q 044773 78 TEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQ 155 (289)
Q Consensus 78 ~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 155 (289)
+..+++++++||||. +++|+|+||++++ +.+.+.+.... ....++++.|.++..++++...+.+++++.++.+++
T Consensus 247 -~~~~~~i~~~S~SK~-~~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 323 (427)
T 3ppl_A 247 -GNPNRFWAFTSTSKI-TLAGAGVSFFLTS-AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAP 323 (427)
T ss_dssp -TCTTSEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred -CCCCcEEEEechhhc-cCcCccEEEEEcC-HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHH
Confidence 245789999999999 5699999999996 44444444332 234478899999999999833237889999999999
Q ss_pred HHHHHHHHHHhc-----CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC-CCCCCC---CCCCeEE
Q 044773 156 RHRKLVSGLEKA-----GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP-GSSCHC---TEPGWFR 226 (289)
Q Consensus 156 ~~~~l~~~l~~~-----g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~---~~~~~~R 226 (289)
+++.+.+.|.+. ++.+..|++|+|+|++++.. + ..++...+ .++||.+.| |..|+. ..++++|
T Consensus 324 ~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-~------~~~~~~~l-~~~gv~v~~~g~~~~~~~~~~~~~~R 395 (427)
T 3ppl_A 324 KFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG-T------ASRVAELA-KEAGIALTGAGSSYPLRQDPENKNLR 395 (427)
T ss_dssp HHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT-C------HHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEE
T ss_pred HHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc-h------HHHHHHHH-HHCCCEEecCcCcCCCCCCCCCCeEE
Confidence 999998888653 47778899999999999863 1 23465554 577999999 555542 3578999
Q ss_pred EEEecCCHHHHHHHHHHHHHHHHHHH
Q 044773 227 VCFANMSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 227 is~~~~~~e~l~~~l~~l~~~l~~~~ 252 (289)
|+++..+++++++++++|++++++..
T Consensus 396 is~~~~~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 396 LAPSLPPVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp ECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99986689999999999999988764
No 44
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.97 E-value=1.6e-30 Score=233.71 Aligned_cols=224 Identities=17% Similarity=0.196 Sum_probs=178.4
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++.. ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ...++.....+. +.+..
T Consensus 147 l~~~~~~--~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~---~~~~~ 220 (376)
T 3ezs_A 147 LNEKELQ--EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT-PPPSLLEACMLA---GNEAF 220 (376)
T ss_dssp CCHHHHH--HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-CCCCHHHHHHHT---TCTTC
T ss_pred HHhhhcc--CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCHHHccccc---ccccc
Confidence 3445543 58999999999999999999999999999999999999999999987766 344544442100 00135
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
++++++.|+||.+|++|+|+||++++ +.+.+.+..... .+..|++.+.++..+++... ++++.++.++++++.
T Consensus 221 ~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~ 295 (376)
T 3ezs_A 221 KNVLVIHSLSKRSSAPGLRSGFIAGD-SRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDR----HAEFFRNIYANNLKL 295 (376)
T ss_dssp TTEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSH----HHHHHHHHHHHHHHH
T ss_pred CcEEEEecchhccCCccceeEEEeeC-HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcH----HHHHHHHHHHHHHHH
Confidence 78999999999999999999999995 555555544332 23478899999999998743 478888999999999
Q ss_pred HHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC--CCCCCeEEEEEecCCHHHH
Q 044773 160 LVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH--CTEPGWFRVCFANMSEDTL 237 (289)
Q Consensus 160 l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--~~~~~~~Ris~~~~~~e~l 237 (289)
+.+.|+ ++. .+.+|+++|++++ + ..+++..|++++||.+.||..|+ ...++++||+++. +++++
T Consensus 296 l~~~l~--~~~--~~~~~~~~~~~~~---~------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i 361 (376)
T 3ezs_A 296 ARKIFK--NTL--IYPYSFYVYLPVQ---N------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLL 361 (376)
T ss_dssp HHHHST--TCC--CCSBSSEEEEECS---C------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHH
T ss_pred HHHHhc--CCC--CCCcceEEEEECC---C------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHH
Confidence 999998 554 6788899999987 1 24678888865899999999998 4567899999985 99999
Q ss_pred HHHHHHHHHHHHH
Q 044773 238 KLSMQRLKAFVDS 250 (289)
Q Consensus 238 ~~~l~~l~~~l~~ 250 (289)
++++++|++++++
T Consensus 362 ~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 362 EKPLEIIETYREN 374 (376)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988753
No 45
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.97 E-value=1.5e-30 Score=244.90 Aligned_cols=228 Identities=23% Similarity=0.349 Sum_probs=178.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHH-HcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFIT-EKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~-~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|++++||||||.+++.+++++|+++|+ ++++++|+||+|.++.++ ..++... ..+++++++
T Consensus 243 ~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~---~~~~~~~----------~~~~~i~~~ 309 (533)
T 3f6t_A 243 PSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN---FKSIYSV----------VPYNTMLVY 309 (533)
T ss_dssp TTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT---CCCHHHH----------SGGGEEEEE
T ss_pred CCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC---ccCHhhc----------CCCCEEEEe
Confidence 57999999999999999999999999999999 589999999999987543 3444444 237899999
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHH------------------------------------Hhc--cccCCCChHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAA------------------------------------TKM--SSFGLVSSQTQY 130 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~------------------------------------~~~--~~~~~~~~~~q~ 130 (289)
||||.+|++|+|+||++++++.+.+.+ ... ....+.+++.|.
T Consensus 310 S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~ 389 (533)
T 3f6t_A 310 SYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQI 389 (533)
T ss_dssp ESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHH
T ss_pred cCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHH
Confidence 999999999999999999776222211 111 123346677887
Q ss_pred HH----HHHhC-C---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCcccc---CCCh------
Q 044773 131 LL----SALLS-D---KKFAQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLS---SNTF------ 193 (289)
Q Consensus 131 ~~----~~~l~-~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~---~~~~------ 193 (289)
++ ..++. + ..+ .+++++.++.++++++.+.+.|. .++.+..+++|+|+|++++.... ...+
T Consensus 390 a~a~~a~~~L~~~~g~~~~-~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~ 467 (533)
T 3f6t_A 390 MEALFSMTHLLTSTNGGSD-DPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTN 467 (533)
T ss_dssp HHHHHHHHHHTTCBGGGTB-CHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccch-HHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhc
Confidence 73 34453 1 223 67789999999999999999998 78888889999999999874211 0000
Q ss_pred -hhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Q 044773 194 -EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 194 -~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
.+..+++..+++++||.+.||+.|+. +++++||+++.++++++++++++|+++++++..
T Consensus 468 ~~~~~~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 468 NFEQVDFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HCCHHHHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 12246778888899999999999986 578999999867999999999999999988765
No 46
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.97 E-value=6.2e-30 Score=232.85 Aligned_cols=222 Identities=19% Similarity=0.277 Sum_probs=175.3
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
.++++++++++||||||.+++.+++++|+++|+++|+++|+||+|... +.+..... ..+ +..+++++++
T Consensus 178 ~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~-~~~~~~~~---~~~-------~~~~~~i~~~ 246 (417)
T 3g7q_A 178 GEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVP-FPGIIFSE---ARP-------LWNPNIILCM 246 (417)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSC---CCC-------CCCTTEEEEE
T ss_pred ccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccc-cccccccc---ccc-------CCCCCEEEEE
Confidence 457899999999999999999999999999999999999999999753 21111111 111 2457899999
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISE-NKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~ 165 (289)
|||| ++++|+|+||++++ +.+.+.+..... ...++++.|.++..++++..+ .++..+ .++.++++++.+.+.|.
T Consensus 247 s~sK-~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T 3g7q_A 247 SLSK-LGLPGSRCGIIIAN-DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDL-LRLSETVIKPFYYQRVQQTIAIIR 323 (417)
T ss_dssp ESGG-GTCTTSCCEEEECC-HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred echh-ccCCCcceEEEEeC-HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 57899999999995 455555443322 233688999999999998876 555555 78889999999999987
Q ss_pred hc----CCceecCCceEEEEEecCc-cccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCC-------CCeEEEEEecCC
Q 044773 166 KA----GISCLKSNAGLFCWVDMRH-LLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE-------PGWFRVCFANMS 233 (289)
Q Consensus 166 ~~----g~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~-------~~~~Ris~~~~~ 233 (289)
+. ++.+..+++|+++|++++. ..+ ..+++..| .++||.+.||..|+... ++++||+++. +
T Consensus 324 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~ 395 (417)
T 3g7q_A 324 RYLSEERCLIHKPEGAIFLWLWFKDLPIT------TELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-E 395 (417)
T ss_dssp HHCCTTTCEEECCCBSSEEEEECTTCSSC------HHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-C
T ss_pred HhcccCCceeeCCCcceEEEEEcCCCCCC------HHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEecC-C
Confidence 74 5788889999999999885 222 24577776 47799999999887533 5799999996 9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 044773 234 EDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 234 ~e~l~~~l~~l~~~l~~~~ 252 (289)
++++++++++|++++++..
T Consensus 396 ~~~i~~~~~~l~~~l~~~~ 414 (417)
T 3g7q_A 396 PDKIEAGVKILAEEIERAW 414 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764
No 47
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.97 E-value=7.5e-30 Score=233.10 Aligned_cols=236 Identities=17% Similarity=0.199 Sum_probs=181.2
Q ss_pred hHHHhhhCCCccEEEE-eCCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEecCCCCCccCC---CCccChhhhhhccccc
Q 044773 2 YQLAQKRHLKVKGVLV-TNPSNPLGTTMSRNELNLLVNFI-TEKNIHLISDEIYSGTVFSS---PGFVSIMEILKDRNCE 76 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l-~~p~NPtG~~~~~~~l~~l~~~~-~~~~~~li~Dea~~~~~~~~---~~~~~~~~~~~~~~~~ 76 (289)
+++++++.+++++|++ ++||||||.+++.+++++|+++| +++|+++|+||+|..+.+.+ ....++.++....
T Consensus 163 l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~--- 239 (423)
T 3ez1_A 163 VERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDA--- 239 (423)
T ss_dssp HHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHH---
T ss_pred HHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhcc---
Confidence 4555554568999865 48899999999999999999999 99999999999999765544 2334555543111
Q ss_pred cCCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCC--chHHHHHHHHHHHH
Q 044773 77 NTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSD--KKFAQNYISENKKR 152 (289)
Q Consensus 77 ~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~ 152 (289)
+..+++++++||||. +++|+|+||+++++ .+.+.+..... ....+++.|.++..++.+ ..+ .+++++.++.
T Consensus 240 --~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~ 314 (423)
T 3ez1_A 240 --GYPDRAFVFASTSKI-TFAGAGLGFVASSE-DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGL-EGLMRDHAAI 314 (423)
T ss_dssp --TCTTSEEEEEESTTT-SCSSSSCEEEEECH-HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHH-HHHHHHHHHH
T ss_pred --CCCCeEEEEeCchhh-ccCCcceEEEEeCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchH-HHHHHHHHHH
Confidence 245889999999999 46999999999965 44444443322 244788999999999987 554 7888888999
Q ss_pred HHHHHHHHHHHHHh----cC--CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC-CCCCCC---CCC
Q 044773 153 LKQRHRKLVSGLEK----AG--ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP-GSSCHC---TEP 222 (289)
Q Consensus 153 ~~~~~~~l~~~l~~----~g--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~---~~~ 222 (289)
++++++.+.+.|.+ .| +.+..|++|+|+|++++.. + ...+.. +++++||.+.| |..|+. ..+
T Consensus 315 ~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-~------~~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~ 386 (423)
T 3ez1_A 315 IAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-V------ADRVVK-LAEAAGVSLTPAGATYPAGQDPHN 386 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-C------HHHHHH-HHHHTTEECCCTTTTSSTTCCSSS
T ss_pred HHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-c------HHHHHH-HHHHCCcEEecCcccccCCCCCCC
Confidence 99998888888765 34 6777889999999998753 1 123444 45688999999 667753 346
Q ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Q 044773 223 GWFRVCFANMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 223 ~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+++||+++..+++++++++++|++++++...
T Consensus 387 ~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 387 RNLRLAPTRPPVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp CEEEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999756999999999999999987654
No 48
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=6.2e-30 Score=231.37 Aligned_cols=213 Identities=27% Similarity=0.508 Sum_probs=174.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ...++..+.. ..+++++++|
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~--------~~~~~i~~~s 243 (389)
T 1o4s_A 173 GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSE--------GFDRIVYING 243 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCS--------SSTTEEEEEE
T ss_pred cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCC--------CCCcEEEEee
Confidence 468999999999999999999999999999999999999999999877655 3345555511 2478999999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||+++++ .+.+.+..... ....+++.|.++..+++.. +++.++.++++++++.+.|++.
T Consensus 244 ~sK~~~~~G~r~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 244 FSKSHSMTGWRVGYLISSE-KVATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp STTTTTCGGGCCEEEECCH-HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhcCCcccceEEEEeCH-HHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998999999999954 45544443322 2447888999988888874 4677788899999999999988
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
|+++..+.+|+++|++++ .+ ..++...|++++||.+.||..|+. ++++||+++. +++++++++++|+++
T Consensus 317 g~~~~~~~~~~~~~~~~~--~~------~~~l~~~l~~~~gi~v~~g~~f~~--~~~~Ris~~~-~~~~l~~~l~~l~~~ 385 (389)
T 1o4s_A 317 GVKFVEPEGAFYLFFKVR--GD------DVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFAT-SIERLTEALDRIEDF 385 (389)
T ss_dssp TCCCCCCSBSSEEEEECS--SC------HHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCeeecCCcceEEEEeCC--CC------HHHHHHHHHHHCCEEEeCchhcCC--CCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence 888888889999999886 11 246788887677999999998874 4699999995 999999999999987
Q ss_pred HH
Q 044773 248 VD 249 (289)
Q Consensus 248 l~ 249 (289)
++
T Consensus 386 l~ 387 (389)
T 1o4s_A 386 LN 387 (389)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 49
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.97 E-value=3.7e-30 Score=235.86 Aligned_cols=231 Identities=15% Similarity=0.189 Sum_probs=180.5
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCcc----Ch-hhhhhccccc
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFV----SI-MEILKDRNCE 76 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~----~~-~~~~~~~~~~ 76 (289)
++++++. +++++|++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++.... ++ ..+ .
T Consensus 174 l~~~l~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~----- 246 (437)
T 3g0t_A 174 LESYLQT-GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSV-A----- 246 (437)
T ss_dssp HHHHHTT-TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCG-G-----
T ss_pred HHHHHhc-CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhcc-C-----
Confidence 3455533 4799999999999999999999999999999999999999999998777532211 11 223 1
Q ss_pred cCCCCCceEEEecCccccCCCCceEEEEEecCHHHHH-H-----------------HHhcc--ccCCCChHHHHHHHHHh
Q 044773 77 NTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVA-A-----------------ATKMS--SFGLVSSQTQYLLSALL 136 (289)
Q Consensus 77 ~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~-~-----------------~~~~~--~~~~~~~~~q~~~~~~l 136 (289)
+..+++++++|+||.+|++|+|+||+++++ .+.+ . +.... ..+..+++.+.++..++
T Consensus 247 --~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 323 (437)
T 3g0t_A 247 --NYTDNYILALSSSKAFSYAGQRIGVLMISG-KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAML 323 (437)
T ss_dssp --GTCSCEEEEEESTTTTSCGGGCCEEEEECH-HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHH
T ss_pred --CCCCcEEEEEcCccCCCCccceeEEEEECH-HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHH
Confidence 135888999999999999999999999964 4444 3 33322 23458889999999998
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcee-------cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCe
Q 044773 137 SDKKFAQNYISENKKRLKQRHRKLVSGLEKAGISCL-------KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKL 209 (289)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-------~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi 209 (289)
+.......++++.+++++++++++.+.|+++|+++. ++.+++++|++++ .. +..++...|. ++||
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~l~~~L~-~~gi 395 (437)
T 3g0t_A 324 KACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYK-GM------DSSKLIEKFV-RYGM 395 (437)
T ss_dssp HHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEET-TC------CHHHHHHHHH-HTTE
T ss_pred hCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecC-CC------CHHHHHHHHH-HcCe
Confidence 864311222788899999999999999999888887 4488899999987 22 2246788777 5599
Q ss_pred EEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 210 NISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 210 ~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
.+.|+..|+...++++||+++..+++++++++++|++++++
T Consensus 396 ~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 396 CAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp ECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 99999999865558899999866899999999999998753
No 50
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.97 E-value=2.6e-30 Score=232.05 Aligned_cols=214 Identities=24% Similarity=0.421 Sum_probs=174.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+ |+++|+++|+++|+||+|.++.+++. ..++.++. +..+++++++|
T Consensus 153 ~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~--------~~~~~~i~~~s 219 (370)
T 2z61_A 153 DKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFD--------ENLEKTILING 219 (370)
T ss_dssp SSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTC--------TTCSSEEEEEE
T ss_pred cCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHcc--------CCCCcEEEEec
Confidence 3689999999999999999955 99999999999999999998777653 34544441 13478999999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSD-KKFAQNYISENKKRLKQRHRKLVSGLEK 166 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 166 (289)
+||.+|++|+|+||+++++ .+.+.+.... ..+..|++.|.++..+++. . .+++++.++.++++++++.+.|++
T Consensus 220 ~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~ 295 (370)
T 2z61_A 220 FSKLYAMTGWRIGYVISND-EIIEAILKLQQNLFISAPTISQYAALKAFEKET---EREINSMIKEFDRRRRLVLKYVKD 295 (370)
T ss_dssp STTTTTCGGGCCEEEECCH-HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhccCCccceEEEEEECH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998999999999965 5555444332 2235788999988888875 3 566888899999999999999998
Q ss_pred cCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHH
Q 044773 167 AGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 246 (289)
Q Consensus 167 ~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 246 (289)
+|+++..+++|+++|++++. + ..++...|++++||.+.||..|+..+++++||+++ ++++++++++++|++
T Consensus 296 ~g~~~~~~~~~~~~~~~~~~--~------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~ 366 (370)
T 2z61_A 296 FGWEVNNPIGAYYVFPNIGE--D------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKE 366 (370)
T ss_dssp TTCBCCCCCBTTEECCBCSS--C------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHH
T ss_pred cCCeecCCCcceEEEEecCC--C------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHH
Confidence 88888888899999998875 1 24578888767899999999887545689999999 599999999999998
Q ss_pred HHH
Q 044773 247 FVD 249 (289)
Q Consensus 247 ~l~ 249 (289)
+++
T Consensus 367 ~l~ 369 (370)
T 2z61_A 367 FLN 369 (370)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 51
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.97 E-value=6.1e-30 Score=233.32 Aligned_cols=218 Identities=13% Similarity=0.238 Sum_probs=171.1
Q ss_pred Ccc-EEEEeCC-CCCCccCCCHHHHHHHHHHHH------HcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCC
Q 044773 11 KVK-GVLVTNP-SNPLGTTMSRNELNLLVNFIT------EKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWN 82 (289)
Q Consensus 11 ~~~-~i~l~~p-~NPtG~~~~~~~l~~l~~~~~------~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 82 (289)
+++ ++++++| |||||.+++.+++++|+++|+ ++++++|+||+|.++.+++....++....++ ..+
T Consensus 178 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-------~~~ 250 (418)
T 3rq1_A 178 QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSH-------LPK 250 (418)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTT-------CCT
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHh-------cCC
Confidence 345 7899999 999999999999999999999 8999999999999876554333333333221 223
Q ss_pred c--eEEEecCccccCCCCceEEEEEe--cCHHHHHHHHhcc------ccCCCChHHHHHHHHHhCCchHH---HHHHHHH
Q 044773 83 R--VHIVYSLSKDLGLPGFRVGAIYS--NDDTVVAAATKMS------SFGLVSSQTQYLLSALLSDKKFA---QNYISEN 149 (289)
Q Consensus 83 ~--~i~i~s~sK~~g~~G~r~G~i~~--~~~~~~~~~~~~~------~~~~~~~~~q~~~~~~l~~~~~~---~~~~~~~ 149 (289)
+ +++++||||.+|++|+|+||+++ +++.+.+.+.... .+..++.+.|.++..++++..+. .+..++.
T Consensus 251 ~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 330 (418)
T 3rq1_A 251 EILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCY 330 (418)
T ss_dssp TEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4 58899999999999999999998 2455555444321 22447889999999999986421 4455677
Q ss_pred HHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEE
Q 044773 150 KKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 229 (289)
Q Consensus 150 ~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~ 229 (289)
++.++++++++.+.|+++|+++.++++|+|+|+++.+ ..+++..| +++||.+.|| ++++||++
T Consensus 331 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l-~~~gi~v~~g-------~~~iRis~ 393 (418)
T 3rq1_A 331 YQLIRDRADIFKQEAAQVGLPMLPYRGGFFITIPTDS---------ANAICEEL-KKEHIYVIAL-------ANGIRIAA 393 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCCCSSSEEEEECTT---------HHHHHHHH-HHTTEECEEC-------SSEEEEEG
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEcCCCC---------HHHHHHHH-HhCCEEEecC-------CCCeEEEE
Confidence 8899999999999999889999999999999988742 24566654 6789999997 35899999
Q ss_pred ecCCHHHHHHHHHHHHHHHHHHH
Q 044773 230 ANMSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 230 ~~~~~e~l~~~l~~l~~~l~~~~ 252 (289)
+.++++++++++++|++++++..
T Consensus 394 ~~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 394 CGIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp GGSCHHHHTTHHHHHHHHHHHTT
T ss_pred ecCCHHHHHHHHHHHHHHHHHHh
Confidence 75699999999999999987653
No 52
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.97 E-value=5.3e-30 Score=230.87 Aligned_cols=219 Identities=21% Similarity=0.339 Sum_probs=175.6
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+ +....++.++ ..+++++++|
T Consensus 151 ~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~----------~~~~~~~~~s 219 (381)
T 1v2d_A 151 PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF----------APERTFTVGS 219 (381)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH----------CTTTEEEEEE
T ss_pred cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh----------cCCCEEEEee
Confidence 4689999999999999999999999999999999999999999998866 5444555554 1367899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
+||.+|++|+|+||++++++.+ +.+.... ..++.+++.|.++..+++...+ .+++++.+++++++++++.+.|++.
T Consensus 220 ~sK~~~~~G~r~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 220 AGKRLEATGYRVGWIVGPKEFM-PRLAGMRQWTSFSAPTPLQAGVAEALKLARR-EGFYEALREGYRRRRDLLAGGLRAM 297 (381)
T ss_dssp HHHHTTCGGGCCEEEECCTTTH-HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhcCCcccceEEEEeCHHHH-HHHHHHHhhcccCCCcHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999998999999999965543 3333222 2344788899888888875432 4567888999999999999999998
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC--CCCCeEEEEEecCCHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFANMSEDTLKLSMQRLK 245 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~~~Ris~~~~~~e~l~~~l~~l~ 245 (289)
|+++..+.+|+++|++++.. + ...+++++||.+.||..|+. ..++++||+++. +++++++++++|+
T Consensus 298 g~~~~~~~~~~~~~~~~~~~----------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~ 365 (381)
T 1v2d_A 298 GLRVYVPEGTYFLMAELPGW----------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLG 365 (381)
T ss_dssp TCCEECCSBSSEEEEECTTC----------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHH
T ss_pred CCEecCCCcceEEEEecChH----------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHH
Confidence 99998888899999988742 1 34456688999999998875 346799999986 9999999999999
Q ss_pred HHHHHHHH
Q 044773 246 AFVDSITT 253 (289)
Q Consensus 246 ~~l~~~~~ 253 (289)
+++++...
T Consensus 366 ~~l~~~r~ 373 (381)
T 1v2d_A 366 RVVNSPRE 373 (381)
T ss_dssp HHC-----
T ss_pred HHHhhccc
Confidence 98876543
No 53
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.97 E-value=1e-29 Score=228.46 Aligned_cols=222 Identities=22% Similarity=0.324 Sum_probs=181.0
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCC
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWN 82 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 82 (289)
+++++ +++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.++ ...+..+ ..+
T Consensus 148 ~~~l~--~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~--~~~~~~~-----------~~~ 212 (375)
T 3op7_A 148 RQLIR--PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL--DVPSIIE-----------VYD 212 (375)
T ss_dssp HHHCC--TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS--CCCCHHH-----------HCT
T ss_pred HHhhc--cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc--CCCchhh-----------hcC
Confidence 44443 47899999999999999999999999999999999999999999987654 2233333 236
Q ss_pred ceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcccc--CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Q 044773 83 RVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 83 ~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 160 (289)
++++++||||.+|++|+|+||+++ ++.+.+.+...... ...+++.+.++..+++.. +.++++.++.++++++.+
T Consensus 213 ~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l 288 (375)
T 3op7_A 213 KGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLALAHY---QEILERNRHILEENLAIL 288 (375)
T ss_dssp TEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999 56666666554432 335778888888888752 667888899999999999
Q ss_pred HHHHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHH
Q 044773 161 VSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 239 (289)
Q Consensus 161 ~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~ 239 (289)
.+.|++. ++.+..+.+|++.|+.++...+ ..+++..+++++||.+.||..|+. ++++||+++. +.+++++
T Consensus 289 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~-~~~~i~~ 359 (375)
T 3op7_A 289 DQWIEEEPLVSYIRPAVVSTSFVKIAVDMP------MEDFCLQLLQEHGVLLVPGNRFER--DGYVRLGFAC-EQETLIK 359 (375)
T ss_dssp HHHHHHCTTEEECCCSSSSCEEEEECCSSC------HHHHHHHHHHHHCEECEEGGGGTC--TTEEEECCCS-CHHHHHH
T ss_pred HHHHhhCCCceEecCCCeEEEeEEcCCCCC------HHHHHHHHHHhCCEEEeChhhhCC--CCeEEEEecC-CHHHHHH
Confidence 9999987 7888888898888888875432 256888887788999999998875 6899999985 6699999
Q ss_pred HHHHHHHHHHHHH
Q 044773 240 SMQRLKAFVDSIT 252 (289)
Q Consensus 240 ~l~~l~~~l~~~~ 252 (289)
++++|.+++++..
T Consensus 360 ~l~~l~~~l~~~~ 372 (375)
T 3op7_A 360 GLEKLSQFLRRFD 372 (375)
T ss_dssp HHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887543
No 54
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.97 E-value=8.7e-30 Score=230.63 Aligned_cols=212 Identities=23% Similarity=0.445 Sum_probs=170.8
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH------cCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCc
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITE------KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNR 83 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~------~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 83 (289)
+++++|++++||||||.+++.+++++|+++|++ +|+++|+||+|.++.+++.......+ ..++
T Consensus 171 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-----------~~~~ 239 (398)
T 3ele_A 171 AHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTK-----------YYDN 239 (398)
T ss_dssp TTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGG-----------TCSS
T ss_pred cCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHh-----------hcCC
Confidence 468999999999999999999999999999999 99999999999998776644333322 3368
Q ss_pred eEEEecCccccCCCCceEEEEEecCHH-----HHHHHHh---ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Q 044773 84 VHIVYSLSKDLGLPGFRVGAIYSNDDT-----VVAAATK---MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQ 155 (289)
Q Consensus 84 ~i~i~s~sK~~g~~G~r~G~i~~~~~~-----~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 155 (289)
+++++|+||.+|++|+|+||++++++. +...... .......+.+.|.++..++.... .++.+++
T Consensus 240 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--------~~~~~~~ 311 (398)
T 3ele_A 240 TLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG--------DINAYKE 311 (398)
T ss_dssp EEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC--------CHHHHHH
T ss_pred eEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH--------HHHHHHH
Confidence 899999999999999999999997652 2222222 12234466788888888887653 2467788
Q ss_pred HHHHHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHH
Q 044773 156 RHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSED 235 (289)
Q Consensus 156 ~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e 235 (289)
+++++.+.|+++|+++..+.+|+++|++++.. + ..++...| .++||.+.||..|+. ++++||+++ ++++
T Consensus 312 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~------~~~~~~~l-~~~gi~v~~g~~~~~--~~~iRis~~-~~~e 380 (398)
T 3ele_A 312 NRDLLYEGLTRIGYHCFKPDGAFYMFVKALED-D------SNAFCEKA-KEEDVLIVAADGFGC--PGWVRISYC-VDRE 380 (398)
T ss_dssp HHHHHHHHHHHHTCCEECCSBSSEEEEECSSS-C------HHHHHHHH-HTTTEECEESGGGTC--TTEEEEECC-SCHH
T ss_pred HHHHHHHHHHHcCCeecCCCeeEEEEEEcCCC-C------HHHHHHHH-HHCCEEEeCccccCC--CCeEEEEec-CCHH
Confidence 88899999988899999999999999998742 1 24566655 577999999999875 679999998 5999
Q ss_pred HHHHHHHHHHHHHHHH
Q 044773 236 TLKLSMQRLKAFVDSI 251 (289)
Q Consensus 236 ~l~~~l~~l~~~l~~~ 251 (289)
++++++++|++++++.
T Consensus 381 ~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 381 MIKHSMPAFEKIYKKY 396 (398)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998765
No 55
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=5.2e-29 Score=222.45 Aligned_cols=213 Identities=18% Similarity=0.306 Sum_probs=173.6
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCc
Q 044773 12 VKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLS 91 (289)
Q Consensus 12 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~s 91 (289)
++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++ ...+..... +..+++++++|+|
T Consensus 145 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~--------~~~~~~i~~~s~s 214 (361)
T 3ftb_A 145 VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD--PSSSFVGEI--------KNYSCLFIIRAMT 214 (361)
T ss_dssp CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC--TTSSSGGGT--------TTCSSEEEEEESS
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC--cccchhHhc--------ccCCCEEEEeeCh
Confidence 899999999999999999999999999999999999999999987665 223333332 2457889999999
Q ss_pred cccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Q 044773 92 KDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA-GIS 170 (289)
Q Consensus 92 K~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 170 (289)
|.+|++|+|+||+++.++.+.+.+......+..|++.+.++..+++. .+++++.+++++++++++.+.|+++ ++.
T Consensus 215 K~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 215 KFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKD----TNYIEESLLWIKKERKRFIEELNKIGFIK 290 (361)
T ss_dssp STTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHHTSSC----HHHHHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred hhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999546777777776665666889999999999986 4568888999999999999999988 777
Q ss_pred -eecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHH
Q 044773 171 -CLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 171 -~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 249 (289)
+.++.++ ++|++++. . +..++...|.++ ||.+.||..|+..+++++||+++ ++++++++++.|+++.+
T Consensus 291 ~~~~~~~~-~~~~~~~~-~------~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 291 RVFSPHAN-FVLCRLEN-I------SGEKLYDSLLKE-DIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp EEECCSSS-EEEEEESS-S------CHHHHHHHHHTT-TEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred eecCCCCe-EEEEEcCC-C------CHHHHHHHHHHC-CeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 6666665 67788775 1 124677877754 99999999998777899999997 56777777777776654
No 56
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.97 E-value=5.6e-30 Score=233.04 Aligned_cols=218 Identities=15% Similarity=0.253 Sum_probs=171.1
Q ss_pred hHHHhhhCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCC--CccChhhhhhccccccC
Q 044773 2 YQLAQKRHL-KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~~-~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~~~ 78 (289)
++++++..+ +.+++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+..
T Consensus 173 l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~------- 245 (409)
T 4eu1_A 173 MLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVD------- 245 (409)
T ss_dssp HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHT-------
T ss_pred HHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHh-------
Confidence 455565433 456667799999999999999999999999999999999999999876542 1233333322
Q ss_pred CCCCceEEEecCccccCCCCceEEEE--EecCHH----HHHHHHhc--cccCCCChHHHHHHHHHhCCchHH---HHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAI--YSNDDT----VVAAATKM--SSFGLVSSQTQYLLSALLSDKKFA---QNYIS 147 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i--~~~~~~----~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~---~~~~~ 147 (289)
..+++++++||||++|++|+|+||+ +++++. +.+.+... .....++++.|.++..++.+..+. .++++
T Consensus 246 -~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 324 (409)
T 4eu1_A 246 -MVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELK 324 (409)
T ss_dssp -TSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred -hCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4477899999999999999999998 666665 44444433 233446789999999999986421 44578
Q ss_pred HHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 044773 148 ENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 223 (289)
Q Consensus 148 ~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~ 223 (289)
+.++.++++++++.+.|++.| +++..+++|+++|++++ .+++..+++++||.+.|+
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gv~v~p~--------- 384 (409)
T 4eu1_A 325 QMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLT-----------REQVELLRSEYHIYMTLN--------- 384 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC-----------HHHHHHHHHHHCEECCTT---------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCC-----------HHHHHHHHHcCCEEEcCC---------
Confidence 889999999999999999986 78888999999997654 236777888889999985
Q ss_pred eEEEEEecCCHHHHHHHHHHHHHHH
Q 044773 224 WFRVCFANMSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 224 ~~Ris~~~~~~e~l~~~l~~l~~~l 248 (289)
.||+++..++++++.++++|++++
T Consensus 385 -~Ri~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 385 -GRAAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp -CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred -CEEEEEecCHhhHHHHHHHHHHHh
Confidence 399997778888999999998765
No 57
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.97 E-value=2.1e-29 Score=225.57 Aligned_cols=217 Identities=17% Similarity=0.187 Sum_probs=176.6
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCcc--CCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVF--SSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~--~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++. +++++|++++||||||.+++.+++.+|+++| ++|+++|+||+|.++.+ .+....+......
T Consensus 146 l~~~l~--~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-------- 214 (365)
T 3get_A 146 LYETHK--DEIKLIFLCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIK-------- 214 (365)
T ss_dssp HHHHTT--TTEEEEEEESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHH--------
T ss_pred HHHHhC--CCCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhc--------
Confidence 344444 5799999999999999999999999999988 57999999999998764 4444445544433
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
..+++++++|+||.+|++|+|+||+++ ++.+.+.+......+..|++.+.++..+++.. +++++.++.+++++++
T Consensus 215 ~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~ 289 (365)
T 3get_A 215 EFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAMDDD----EFTEKTLENNFSQMEL 289 (365)
T ss_dssp HCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHH
Confidence 457889999999999999999999999 55666666655555558899999999999963 5678889999999999
Q ss_pred HHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHH
Q 044773 160 LVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 239 (289)
Q Consensus 160 l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~ 239 (289)
+.+.|+++|+++.++.++ ++|++++.. + ..++...|. ++||.+.||..|+ ++++||+++ +++++++
T Consensus 290 l~~~l~~~g~~~~~~~~~-~~~~~~~~~-~------~~~~~~~l~-~~gi~v~~g~~~~---~~~iRis~~--~~~~i~~ 355 (365)
T 3get_A 290 YKEFAKKHNIKIIDSYTN-FITYFFDEK-N------STDLSEKLL-KKGIIIRNLKSYG---LNAIRITIG--TSYENEK 355 (365)
T ss_dssp HHHHHHHTTCEECCCSSS-EEEEECSSS-C------HHHHHHHHH-TTTEECEECGGGT---CSEEEEECC--CHHHHHH
T ss_pred HHHHHHhCCCEECCCCCe-EEEEECCCC-C------HHHHHHHHH-HCCEEEEECccCC---CCEEEEEcC--CHHHHHH
Confidence 999999989888776665 588998753 1 245777776 5699999999887 689999997 6899999
Q ss_pred HHHHHHHHH
Q 044773 240 SMQRLKAFV 248 (289)
Q Consensus 240 ~l~~l~~~l 248 (289)
++++|++++
T Consensus 356 l~~~l~~~l 364 (365)
T 3get_A 356 FFTEFDKIL 364 (365)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998875
No 58
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.94 E-value=1.1e-32 Score=249.61 Aligned_cols=223 Identities=18% Similarity=0.209 Sum_probs=181.5
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.+ +..+++++++|
T Consensus 163 ~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-------~~~~~~i~~~s 235 (392)
T 3b1d_A 163 NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSP-------DFKDFALVLSS 235 (392)
Confidence 36889999999999999999999999999999999999999999998776655555555422 12578899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcccc---CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEK 166 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 166 (289)
|||.+|++|+|+||++++++.+.+.+...... ..++++.|.++.++++.. .+++++.++.++++++.+.+.|++
T Consensus 236 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~ 312 (392)
T 3b1d_A 236 ATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG---KPWLVALKAVLEENIQFAVEYFAQ 312 (392)
Confidence 99999999999999999766555555444322 235778888888888753 456888899999999999999987
Q ss_pred -c-CCceecCCceEEEEEecCcc-ccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHH
Q 044773 167 -A-GISCLKSNAGLFCWVDMRHL-LSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQR 243 (289)
Q Consensus 167 -~-g~~~~~~~~g~~~~i~~~~~-~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~ 243 (289)
+ ++.+.++.+++++|++++.. .+ ..+++..|++++||.+.||..|+..+++++||+++. +++++++++++
T Consensus 313 ~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~ 385 (392)
T 3b1d_A 313 EAPRLKVMKPQGTYLIWLDFSDYGLT------DDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKR 385 (392)
Confidence 4 88888999999999988752 12 235777777678999999999986667899999985 78999999999
Q ss_pred HHHHHH
Q 044773 244 LKAFVD 249 (289)
Q Consensus 244 l~~~l~ 249 (289)
|+++++
T Consensus 386 l~~~l~ 391 (392)
T 3b1d_A 386 IVCCLP 391 (392)
Confidence 988765
No 59
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.97 E-value=7.8e-29 Score=220.85 Aligned_cols=219 Identities=19% Similarity=0.230 Sum_probs=177.4
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++.+++++++|++++|+||||.+++.+++++|+++| ++|+++|+|++|.++.+++.. .+.....+ ..
T Consensus 132 l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~-~~~~~~~~--------~~ 201 (354)
T 3ly1_A 132 LKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRF-RSISPMIT--------QG 201 (354)
T ss_dssp HHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTC-CCSHHHHH--------TT
T ss_pred HHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhcccccc-CCHHHHhh--------hc
Confidence 455666545899999999999999999999999999998 799999999999987665543 34444433 33
Q ss_pred -CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Q 044773 82 -NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 82 -~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 160 (289)
+++++++|+||.+|++|+|+||+++ ++.+.+.+......+..|++.+.++..+++.. +++++.++.++++++++
T Consensus 202 ~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l 276 (354)
T 3ly1_A 202 AENIILLKTFSKIHAMAGMRVGYAVA-HPTVIALMGRYVAGEKINFSGVDAALASMNDS----AFITYSKKSNDVSRQIL 276 (354)
T ss_dssp CSSEEEEEESSSTTCCGGGCCEEEEC-CHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeeChhhccChhhhheeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999 45666666666555668899999999999864 55788889999999999
Q ss_pred HHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHH
Q 044773 161 VSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLS 240 (289)
Q Consensus 161 ~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~ 240 (289)
.+.|+++|+.+.++.+ .++|++++. + ..++...|. ++||.+. |.+++ .++++||+++ ++++++++
T Consensus 277 ~~~l~~~~~~~~~~~~-~~~~~~~~~--~------~~~~~~~l~-~~gi~v~-g~~~~--~~~~iRis~~--~~~~i~~~ 341 (354)
T 3ly1_A 277 LKALEDLKLPYLPSEG-NFVFHQLVV--P------LKDYQTHMA-DAGVLIG-RAFPP--ADNWCRISLG--TPQEMQWV 341 (354)
T ss_dssp HHHHHHHTCCBCCCCS-SEEEEECSS--C------HHHHHHHHH-HTTEECC-CCCTT--CTTEEEEECC--CHHHHHHH
T ss_pred HHHHHHCCCeECCCCc-eEEEEECCC--C------HHHHHHHHH-HCCEEEe-ecCCC--CCCEEEEEcC--CHHHHHHH
Confidence 9999988888776554 568899875 1 245777776 6799998 76554 4789999997 68999999
Q ss_pred HHHHHHHHHH
Q 044773 241 MQRLKAFVDS 250 (289)
Q Consensus 241 l~~l~~~l~~ 250 (289)
+++|++++++
T Consensus 342 ~~~l~~~l~~ 351 (354)
T 3ly1_A 342 ADTMREFRKK 351 (354)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 60
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.97 E-value=1.6e-29 Score=230.97 Aligned_cols=218 Identities=17% Similarity=0.241 Sum_probs=171.9
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCC-CccChhhhhhccccccCC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSP-GFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~~~~d 79 (289)
+++++++. ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+..
T Consensus 185 l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-------- 256 (420)
T 4f4e_A 185 MLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAA-------- 256 (420)
T ss_dssp HHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHH--------
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHh--------
Confidence 45555543 4678999999999999999999999999999999999999999999877642 2334444432
Q ss_pred CCCceEEEecCccccCCCCceEEEEEe--cCHHHHHH----HHhc--cccCCCChHHHHHHHHHhCCchH---HHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYS--NDDTVVAA----ATKM--SSFGLVSSQTQYLLSALLSDKKF---AQNYISE 148 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~--~~~~~~~~----~~~~--~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~ 148 (289)
..+++++++||||.+|++|+|+||+++ +++.+.+. +... ..+..++.+.|.+++.++....+ +.+++++
T Consensus 257 ~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 336 (420)
T 4f4e_A 257 ANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGE 336 (420)
T ss_dssp TTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 457899999999999999999999964 44443322 2222 23444678999999999988652 1566889
Q ss_pred HHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCe
Q 044773 149 NKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 224 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~ 224 (289)
.++.++++++.+.+.|+++ |+.+..+++|+|+|++++. +.+..+++++||.+.|+
T Consensus 337 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gI~v~~~---------- 395 (420)
T 4f4e_A 337 MRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTS-----------AQVDRLREEFGIYAVST---------- 395 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCCH-----------HHHHHHHHhCCEEecCC----------
Confidence 9999999999999999987 6888889999999987742 34556667889999985
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHH
Q 044773 225 FRVCFANMSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 225 ~Ris~~~~~~e~l~~~l~~l~~~l 248 (289)
.||+++..+++++++++++|++++
T Consensus 396 ~Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 396 GRICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp SEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CeEEEecCCHHHHHHHHHHHHHHh
Confidence 299998667888999999998875
No 61
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=7.6e-29 Score=222.08 Aligned_cols=214 Identities=17% Similarity=0.263 Sum_probs=169.5
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. +...... ..++++++.|
T Consensus 145 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~--------~~~~~i~~~s 213 (364)
T 1lc5_A 145 PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHET---GFIPALK--------DNPHIWVLRS 213 (364)
T ss_dssp TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCC---CSGGGCT--------TCTTEEEEEE
T ss_pred CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCcc---chhhHhc--------cCCCEEEEEE
Confidence 5789999999999999999999999999999999999999999998765422 2222222 3477899999
Q ss_pred CccccCCCCceEEEEE-ecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 044773 90 LSKDLGLPGFRVGAIY-SNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA- 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 167 (289)
+||.+|++|+|+||++ + ++.+.+.+......+..|++.+.++..+++.. +++++.++.++++++++.+.|+++
T Consensus 214 ~sK~~~~~G~r~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~ 288 (364)
T 1lc5_A 214 LTKFYAIPGLRLGYLVNS-DDAAMARMRRQQMPWSVNALAALAGEVALQDS----AWQQATWHWLREEGARFYQALCQLP 288 (364)
T ss_dssp STTTTTCTTTCCEEEECC-CHHHHHHHHHHSCTTCSCHHHHHHHHHGGGCH----HHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred CchhhcCCccceEEEEEC-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999 7 45555555555445558889999999999873 457888899999999999999987
Q ss_pred CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 168 GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 168 g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
|+++.++. |.|+|++++.. . .++...|+ ++||.+.||..|+..+++++||+++ ++++++++++.|+++
T Consensus 289 ~~~~~~~~-g~~~~~~~~~~--~------~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~ 356 (364)
T 1lc5_A 289 LLTVYPGR-ANYLLLRCERE--D------IDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNV 356 (364)
T ss_dssp TEEECCCS-SSEEEEEESCT--T------CCHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred CCEECCCC-CeEEEEECCCc--H------HHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHH
Confidence 78776555 45678887642 1 23677776 5699999999987555789999997 478889999988887
Q ss_pred HHHH
Q 044773 248 VDSI 251 (289)
Q Consensus 248 l~~~ 251 (289)
+++.
T Consensus 357 ~~~~ 360 (364)
T 1lc5_A 357 LTGI 360 (364)
T ss_dssp C---
T ss_pred hhcc
Confidence 7654
No 62
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.97 E-value=2e-29 Score=229.64 Aligned_cols=215 Identities=17% Similarity=0.278 Sum_probs=169.1
Q ss_pred Ccc-EEEEeCC-CCCCccCCCHHHHHHHHHHHH------HcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCC
Q 044773 11 KVK-GVLVTNP-SNPLGTTMSRNELNLLVNFIT------EKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWN 82 (289)
Q Consensus 11 ~~~-~i~l~~p-~NPtG~~~~~~~l~~l~~~~~------~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 82 (289)
+++ ++++++| |||||.+++.+++++|+++|+ ++|+++|+||+|.++.+++....++....++ ..+
T Consensus 177 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-------~~~ 249 (413)
T 3t18_A 177 SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSN-------LPR 249 (413)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTT-------CCT
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhh-------cCC
Confidence 456 7889999 999999999999999999999 8999999999999987776554554444332 223
Q ss_pred c--eEEEecCccccCCCCceEEEEEec--CHHHHHHHHhc------cccCCCChHHHHHHHHHhCCchH--HHHHHHHHH
Q 044773 83 R--VHIVYSLSKDLGLPGFRVGAIYSN--DDTVVAAATKM------SSFGLVSSQTQYLLSALLSDKKF--AQNYISENK 150 (289)
Q Consensus 83 ~--~i~i~s~sK~~g~~G~r~G~i~~~--~~~~~~~~~~~------~~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~ 150 (289)
+ +++++||||.+|++|+|+||++++ ++.+.+.+... ..+..++.+.|.++..++++..+ +.++.++.+
T Consensus 250 ~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 329 (413)
T 3t18_A 250 NLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLR 329 (413)
T ss_dssp TEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred CeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 3 588999999999999999999983 45555544432 12344788999999999987652 156677888
Q ss_pred HHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe
Q 044773 151 KRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 230 (289)
Q Consensus 151 ~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~ 230 (289)
+.++++++++.+.|++.|+++.++++|+|+|+++.. ..+++..| .++||.+.|| ++++||+++
T Consensus 330 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l-~~~gv~v~~g-------~~~iRis~~ 392 (413)
T 3t18_A 330 NMLKSRADVFVTAAKENKLTMIPYFGGFFTFIPTDK---------AFDIVKDL-EKENIFTIPS-------AKGIRVAIC 392 (413)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCBCCCSSSCEEEECSC---------HHHHHHHH-HHTTEECEEC-------SSEEEECTT
T ss_pred HHHHHHHHHHHHHHHHcCCCccCCCceEEEEeCCCC---------HHHHHHHH-HhCCEEEecC-------CCceEEEEe
Confidence 999999999999999999999999999999987631 14566655 5789999997 468999997
Q ss_pred cCCHHHHHHHHHHHHHHHHHHH
Q 044773 231 NMSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 231 ~~~~e~l~~~l~~l~~~l~~~~ 252 (289)
..+++++ +++|.+++++..
T Consensus 393 ~~~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 393 GVGEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp TSCGGGH---HHHHHHHHHHHH
T ss_pred eCCHHHH---HHHHHHHHHHHh
Confidence 6566666 888888887654
No 63
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.97 E-value=1.2e-28 Score=226.55 Aligned_cols=222 Identities=20% Similarity=0.312 Sum_probs=173.3
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
.+++++|++++||||||.+++.+++++|+++|+++|+++|+||+|+.+ +.+..... ... +..+++++++
T Consensus 204 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~---~~~-------~~~~~~i~~~ 272 (444)
T 3if2_A 204 EGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPNIIYSD---AHL-------NWDNNTILCF 272 (444)
T ss_dssp TTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSC---CCC-------CCCTTEEEEE
T ss_pred CCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCc-cccccccc---ccc-------cCCCCEEEEe
Confidence 568999999999999999999999999999999999999999999753 21111111 101 2357899999
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFAQNYISE-NKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~ 165 (289)
||||. +++|+|+||++++ +.+.+.+..... .+..+++.|.++..++....+ ..+.++ .++.++++++.+.+.|.
T Consensus 273 S~sK~-~~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 349 (444)
T 3if2_A 273 SLSKI-GLPGMRTGIIVAD-AKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRI-KQLSDNEIKPFYQKQATLAVKLLK 349 (444)
T ss_dssp ESTTT-TCGGGCCEEEECC-HHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred chhhc-cCCCCceEEEEEC-HHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCch-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99997 6799999999995 445444443322 234788999999999998876 555555 78889999999998887
Q ss_pred hc----CCceecCCceEEEEEecCc-cccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCC--------CCeEEEEEecC
Q 044773 166 KA----GISCLKSNAGLFCWVDMRH-LLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE--------PGWFRVCFANM 232 (289)
Q Consensus 166 ~~----g~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~--------~~~~Ris~~~~ 232 (289)
+. ++.+..+.+|+++|++++. ..+ ..+++..| .++||.+.||..|+... ++++||+++.
T Consensus 350 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~- 421 (444)
T 3if2_A 350 QALGDYPLMIHKPEGAIFLWLWFKDLPIS------TLDLYERL-KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA- 421 (444)
T ss_dssp HHSSSSSEEEECCCBSSEEEEEETTCSSC------HHHHHHHH-HHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-
T ss_pred HhcccCCceEecCCccEEEEEEcCCCCCC------HHHHHHHH-HHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-
Confidence 64 4677788999999999875 222 24577766 47799999999986421 2689999997
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 044773 233 SEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 233 ~~e~l~~~l~~l~~~l~~~~ 252 (289)
+++++++++++|++++++..
T Consensus 422 ~~e~i~~~l~~l~~~~~~~~ 441 (444)
T 3if2_A 422 DEQTLIDGIKVIGEVVRELY 441 (444)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988754
No 64
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.97 E-value=1.1e-28 Score=220.83 Aligned_cols=206 Identities=18% Similarity=0.290 Sum_probs=164.4
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecC
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSL 90 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~ 90 (289)
++++|++++||||||.+++.+++++|+++|+ +++++|+||+|.++.. ..++..+.. ..++++++.||
T Consensus 146 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~----~~~~~~~~~--------~~~~~i~~~s~ 212 (356)
T 1fg7_A 146 GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCP----QASLAGWLA--------EYPHLAILRTL 212 (356)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSG----GGCSGGGTT--------TCTTEEEEEES
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcC----CCcHHHHHh--------hCCCEEEEecc
Confidence 6899999999999999999999999999999 9999999999997631 123333322 34778999999
Q ss_pred ccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Q 044773 91 SKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKAG-I 169 (289)
Q Consensus 91 sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~ 169 (289)
||.+|++|+|+||++++ +.+.+.+......+++|++.|.++.+++++..+ +++++.++.++++++++.+.|++++ +
T Consensus 213 sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~ 289 (356)
T 1fg7_A 213 SKAFALAGLRCGFTLAN-EEVINLLMKVIAPYPLSTPVADIAAQALSPQGI--VAMRERVAQIIAEREYLIAALKEIPCV 289 (356)
T ss_dssp SSTTCCGGGCCEEEEEC-HHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHH--HHHHHHHHHHHHHHHHHHHHHHHSTTE
T ss_pred hHhhcCchhhhEEEEeC-HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCccH--HHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999995 555666655544446888999999999986443 2578889999999999999999885 2
Q ss_pred ceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC-CCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHH
Q 044773 170 SCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP-GSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 246 (289)
Q Consensus 170 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 246 (289)
....+.+|+|+|++++ + ..++...| .++||.+.| |..|+. ++++||+++ +++++++++++|++
T Consensus 290 ~~~~~~~~~~~~~~~~---~------~~~l~~~L-~~~gI~v~~~g~~~~~--~~~iRis~~--~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 290 EQVFDSETNYILARFK---A------SSAVFKSL-WDQGIILRDQNKQPSL--SGCLRITVG--TREESQRVIDALRA 353 (356)
T ss_dssp EEECCCSSSEEEEEET---T------HHHHHHHH-HHTTEECEECTTSTTC--TTEEEEECC--CHHHHHHHHHHHHT
T ss_pred eEECCCCCeEEEEECC---C------HHHHHHHH-HHCCEEEEECCCCCCC--CCeEEEEeC--CHHHHHHHHHHHHh
Confidence 2334556788899886 1 24577777 578999999 887774 469999997 47899999998865
No 65
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.97 E-value=4.2e-29 Score=225.92 Aligned_cols=217 Identities=16% Similarity=0.234 Sum_probs=170.5
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCC-CCccChhhhhhccccccCC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSS-PGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~~~~d 79 (289)
+++++.++ ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ....++..+..
T Consensus 163 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-------- 234 (397)
T 3fsl_A 163 LLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIAS-------- 234 (397)
T ss_dssp HHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHH--------
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHh--------
Confidence 45555543 467888999999999999999999999999999999999999999887653 22334444432
Q ss_pred CCCceEEEecCccccCCCCceEEEEEe--cCHHHHH-HHHhc-----cccCCCChHHHHHHHHHhCCchH---HHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYS--NDDTVVA-AATKM-----SSFGLVSSQTQYLLSALLSDKKF---AQNYISE 148 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~--~~~~~~~-~~~~~-----~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~ 148 (289)
..+++++++||||.+|++|+|+||+++ ++..+.. ..... ..+..++.+.|.+++.++....+ ..+++++
T Consensus 235 ~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 314 (397)
T 3fsl_A 235 AGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEE 314 (397)
T ss_dssp TTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 457899999999999999999999985 3444333 22221 23444677999999999997643 1566888
Q ss_pred HHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCe
Q 044773 149 NKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 224 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~ 224 (289)
.++.++++++++.+.|++. |+.+..+++|+|+|++++. +.+..+++++||.+.||.
T Consensus 315 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~g~--------- 374 (397)
T 3fsl_A 315 MRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA-----------AQVDRLREEFGVYLIASG--------- 374 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTTC---------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCCH-----------HHHHHHHHhCCEEECCCC---------
Confidence 9999999999999999987 6888888999999987742 245566778899999873
Q ss_pred EEEEEecCCHHHHHHHHHHHHHH
Q 044773 225 FRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 225 ~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
||+++..+++++++++++|+++
T Consensus 375 -Ris~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 375 -RMCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp -EEEGGGCCTTTHHHHHHHHHHH
T ss_pred -eEEEEecCHhhHHHHHHHHHhh
Confidence 9999866778899999999875
No 66
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.96 E-value=3e-29 Score=227.41 Aligned_cols=216 Identities=17% Similarity=0.244 Sum_probs=167.3
Q ss_pred HHhhh-CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCC--CccChhhhhhccccccCCC
Q 044773 4 LAQKR-HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 4 ~~~~~-~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~~~d~ 80 (289)
+.+++ .++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+.. .
T Consensus 167 ~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~--------~ 238 (401)
T 7aat_A 167 EDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIE--------Q 238 (401)
T ss_dssp HHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHH--------T
T ss_pred HHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHh--------c
Confidence 34443 35788999999999999999999999999999999999999999998866543 1223333322 4
Q ss_pred CCceEEEecCccccCCCCceEEEEEe--cCHH----HHHHHHhc--cccCCCChHHHHHHHHHhCCchHH---HHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYS--NDDT----VVAAATKM--SSFGLVSSQTQYLLSALLSDKKFA---QNYISEN 149 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~--~~~~----~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~---~~~~~~~ 149 (289)
.+++++++||||.+|++|+|+||+++ .++. +...+... .....++.+.|.+++.++.++.+. .+++++.
T Consensus 239 ~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 318 (401)
T 7aat_A 239 GIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGM 318 (401)
T ss_dssp TCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999987 2333 23333322 223346678888888888876431 4567888
Q ss_pred HHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeE
Q 044773 150 KKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWF 225 (289)
Q Consensus 150 ~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~ 225 (289)
+++++++++++.+.|++++ +++..|++|+|+|++++ .+.+..+++++||.+.|+ +
T Consensus 319 ~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~~----------~ 377 (401)
T 7aat_A 319 ADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK-----------PEQVERLTKEFSIYMTKD----------G 377 (401)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEECCTT----------C
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC-----------HHHHHHHHHhCCEeccCC----------C
Confidence 9999999999999999875 77778999999998764 235577778889999864 5
Q ss_pred EEEEecCCHHHHHHHHHHHHHHH
Q 044773 226 RVCFANMSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 226 Ris~~~~~~e~l~~~l~~l~~~l 248 (289)
||+++..++++++.++++|++++
T Consensus 378 Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 378 RISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred eEEeccCChhhHHHHHHHHHHHh
Confidence 99997667777999999998875
No 67
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.96 E-value=5e-29 Score=226.77 Aligned_cols=220 Identities=16% Similarity=0.218 Sum_probs=171.9
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCC--CCccChhhhhhccccccC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSS--PGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~--~~~~~~~~~~~~~~~~~~ 78 (289)
+++++... ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++ ....++..+..
T Consensus 173 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~------- 245 (412)
T 1ajs_A 173 FLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS------- 245 (412)
T ss_dssp HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH-------
T ss_pred HHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc-------
Confidence 44555543 357788899999999999999999999999999999999999999886654 12233443321
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEe---cCHH---HHHHHHh-c-cccCCCChHHHHHHHHHhCCchHH---HHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYS---NDDT---VVAAATK-M-SSFGLVSSQTQYLLSALLSDKKFA---QNYIS 147 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~---~~~~---~~~~~~~-~-~~~~~~~~~~q~~~~~~l~~~~~~---~~~~~ 147 (289)
..++++++.||||.+|.+|+|+||+++ +++. +...+.. . ..+..++++.|.++..+++...+. .++++
T Consensus 246 -~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 324 (412)
T 1ajs_A 246 -EGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVK 324 (412)
T ss_dssp -TTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred -cCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHH
Confidence 347889999999999977999999999 5442 3333333 1 233436889999999999886421 45788
Q ss_pred HHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 044773 148 ENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 223 (289)
Q Consensus 148 ~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~ 223 (289)
+.+++++++++++.+.|++++ +++..+.+|+++|++++ .+++..+++++||.+.|+
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gv~v~~~--------- 384 (412)
T 1ajs_A 325 TMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN-----------PKQVEYLINQKHIYLLPS--------- 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHTTCEECCTT---------
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC-----------HHHHHHHHHhCCEEecCC---------
Confidence 899999999999999999886 78788889999998664 135666777889999974
Q ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 224 WFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 224 ~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
+||+++..+++++++++++|++++++
T Consensus 385 -~Ris~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 385 -GRINMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp -SEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred -cEEEeeeCCHHHHHHHHHHHHHHHHh
Confidence 59999855899999999999998864
No 68
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.96 E-value=5.4e-28 Score=216.25 Aligned_cols=208 Identities=16% Similarity=0.226 Sum_probs=170.0
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++.+++.+|++.|++ |+++|+|++|+++.+ +.. .+..... +..+++++++|
T Consensus 154 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~-~~~~~~~--------~~~~~~i~~~s 222 (363)
T 3ffh_A 154 EKTTIVWICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQP-EKHEKLV--------RTYKNLIITRT 222 (363)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCC-CCCGGGG--------GTCTTEEEEEE
T ss_pred cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccc-cCHHHHh--------hcCCCEEEEee
Confidence 479999999999999999999888888888877 999999999998766 332 2333332 24578999999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cC
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEK-AG 168 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g 168 (289)
+||.+|++|+|+||+++ ++.+.+.+......+..|++.+.++..+++.. +++++.++.++++++++.+.|++ .|
T Consensus 223 ~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~g 297 (363)
T 3ffh_A 223 FSKIYGLASARVGYGIA-DKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQ----AFIGECRTSNANGIKQYEAFAKRFEK 297 (363)
T ss_dssp SSSTTCCSSCCCEEEEE-CHHHHHHHHHTCCSCCCBHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred chhhhcCchhceeeeec-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999 55666666665555668889999999999863 55788889999999999999999 58
Q ss_pred CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 169 ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 169 ~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
+++.++.+ .|+|++++. + ..++...|. ++||.+.||..|+. ++++||+++ ++++++.++++|+++
T Consensus 298 ~~~~~~~~-~~~~~~~~~--~------~~~~~~~l~-~~gi~v~~g~~~~~--~~~iRis~~--~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 298 VKLYPANG-NFVLIDLGI--E------AGTIFSYLE-KNGYITRSGAALGF--PTAVRITIG--KEEDNSAVIALLEKL 362 (363)
T ss_dssp CEECCCCS-SEEEEECSS--C------HHHHHHHHH-HTTEECEETTTTTC--TTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred ceECCCCC-eEEEEECCC--C------HHHHHHHHH-HCCeEEEeCccCCC--CCeEEEECC--CHHHHHHHHHHHHHh
Confidence 88876665 568898874 1 245777776 56999999999875 689999997 789999999999875
No 69
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.96 E-value=1.2e-28 Score=224.86 Aligned_cols=218 Identities=16% Similarity=0.191 Sum_probs=165.9
Q ss_pred hCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 8 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 8 ~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
..++++++++++||||||.+++.+++++|+++|+++++++|+|++|.++.+++............ +..++++++
T Consensus 187 ~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~------~~~~~~i~~ 260 (420)
T 4h51_A 187 APDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFA------RRGIEVLLA 260 (420)
T ss_dssp SCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHH------HTTCCCEEE
T ss_pred cCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHH------hhCceEEEE
Confidence 44567788888899999999999999999999999999999999999987754332222211110 245788999
Q ss_pred ecCccccCCCCceEEEEEecCHHHHHH------HHh--ccccCCCChHHHHHHHHHhCCchHH---HHHHHHHHHHHHHH
Q 044773 88 YSLSKDLGLPGFRVGAIYSNDDTVVAA------ATK--MSSFGLVSSQTQYLLSALLSDKKFA---QNYISENKKRLKQR 156 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~i~~~~~~~~~~------~~~--~~~~~~~~~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~ 156 (289)
.||||.|+++|+|+||++++.+..... +.. ...+++++...|.+++.++.+..+. .++++.+++.++++
T Consensus 261 ~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~ 340 (420)
T 4h51_A 261 QSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTM 340 (420)
T ss_dssp EECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999865433221 111 1334557779999999999986532 55677888999999
Q ss_pred HHHHHHHHHhcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecC
Q 044773 157 HRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM 232 (289)
Q Consensus 157 ~~~l~~~l~~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~ 232 (289)
++.+.+.|+++| |....+++|+|.|+.++. +.++ +++++||++.|+. |||++.+
T Consensus 341 R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~-----------e~v~-~L~e~~Vy~~~~g----------Ris~Agl 398 (420)
T 4h51_A 341 RRTVYDELLRLQTPGSWEHVINQIGMFSFLGLSK-----------AQCE-YCQNHNIFITVSG----------RANMAGL 398 (420)
T ss_dssp HHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCH-----------HHHH-HHHHTTEECCTTC----------EEEGGGC
T ss_pred HHHHHHHHHHhCCCCCCCeecCCCceEEecCcCH-----------HHHH-HHHhCCEEEcCCC----------EEEeccC
Confidence 999999999885 555678889999976642 2344 4568899998752 9999878
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q 044773 233 SEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 233 ~~e~l~~~l~~l~~~l~~~~~ 253 (289)
++++++.+.++|.+++++..+
T Consensus 399 ~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 399 THETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp CHHHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999877543
No 70
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.96 E-value=1.1e-28 Score=227.54 Aligned_cols=221 Identities=17% Similarity=0.257 Sum_probs=173.2
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCC--CccChhhhhhccccccC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~~~ 78 (289)
++++++.. ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+..
T Consensus 192 l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------- 264 (448)
T 3meb_A 192 TKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVD------- 264 (448)
T ss_dssp HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHH-------
T ss_pred HHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhh-------
Confidence 45555543 2577889999999999999999999999999999999999999998866541 1223333322
Q ss_pred CCCCceEEEecCccccCCCCceEEEE--Ee--------cCH----HHHHHHHhc--cccCCCChHHHHHHHHHhCCchHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAI--YS--------NDD----TVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFA 142 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i--~~--------~~~----~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~ 142 (289)
..+++++++||||.+|++|+|+||+ ++ +++ .+...+... ..+..++.+.|.++..++.+..+.
T Consensus 265 -~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~ 343 (448)
T 3meb_A 265 -AGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLL 343 (448)
T ss_dssp -TTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHH
T ss_pred -cCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHH
Confidence 3478899999999999999999998 77 554 344444332 333446779999999999986531
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhc---C------CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeE
Q 044773 143 ---QNYISENKKRLKQRHRKLVSGLEKA---G------ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLN 210 (289)
Q Consensus 143 ---~~~~~~~~~~~~~~~~~l~~~l~~~---g------~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 210 (289)
.+++++.+++++++++++.+.|+++ + +.+..+++|+|+|+.++ .+++..+++++||.
T Consensus 344 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~ll~~~gV~ 412 (448)
T 3meb_A 344 QMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT-----------PEHVDYLKEKWSIY 412 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC-----------HHHHHHHHHhCCEE
Confidence 3557889999999999999999987 3 56677899999998774 24677788889999
Q ss_pred EeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 211 ISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 211 v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
+.||+ .||+++..+++++++++++|+++++.
T Consensus 413 v~~G~---------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 413 LVKAG---------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp ECSGG---------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EeCCC---------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 99975 29999866788899999999999873
No 71
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.96 E-value=4.7e-28 Score=216.96 Aligned_cols=215 Identities=17% Similarity=0.246 Sum_probs=173.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEK--NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~--~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++..+ ++++|++++||||||.+++.+++++|+++|+++ |+++|+||+|.++... .... .. +
T Consensus 149 l~~~l~~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~--~~~~---~~--------~ 214 (367)
T 3euc_A 149 MLAAMAEH-QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE--SWMS---RL--------T 214 (367)
T ss_dssp HHHHHHHH-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC--CSGG---GG--------G
T ss_pred HHHHhhcc-CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc--chHH---HH--------h
Confidence 45555543 689999999999999999999999999999999 9999999999986422 1111 11 2
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
..++++++.||||. +++|+|+||++++ +.+.+.+......+..|++.+.++..+++. .+++++.++++++++++
T Consensus 215 ~~~~~i~~~s~sK~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~ 288 (367)
T 3euc_A 215 DFGNLLVMRTVSKL-GLAGIRLGYVAGD-PQWLEQLDKVRPPYNVNVLTEATALFALEH----VAVLDEQAAQLRAERSR 288 (367)
T ss_dssp TCTTEEEEEECCCT-TSCSCCEEEEEEC-HHHHHHHGGGCCSSCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHH
T ss_pred hCCCEEEEecchhh-cccccCceeeeeC-HHHHHHHHHhCCCCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHH
Confidence 45788999999999 8899999999994 556666666555556889999999999987 44578888999999999
Q ss_pred HHHHHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHH
Q 044773 160 LVSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLK 238 (289)
Q Consensus 160 l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~ 238 (289)
+.+.|+++ |+++.+ .+|.++|++++ + ..++...| .++||.+.||..|+...++++||+++ ++++++
T Consensus 289 l~~~l~~~~g~~~~~-~~~~~~~~~~~---~------~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~ 355 (367)
T 3euc_A 289 VAEGMAAHGGVTVFP-SAANFLLARVP---D------AAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS--TPEENA 355 (367)
T ss_dssp HHHHHHTSTTCEECC-CSSSEEEEECS---C------HHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC--CHHHHH
T ss_pred HHHHHHhCCCcEECC-CCCeEEEEECC---C------HHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC--CHHHHH
Confidence 99999998 888554 45568888886 1 13566665 57799999999887666789999997 789999
Q ss_pred HHHHHHHHHHH
Q 044773 239 LSMQRLKAFVD 249 (289)
Q Consensus 239 ~~l~~l~~~l~ 249 (289)
+++++|+++++
T Consensus 356 ~~~~~l~~~l~ 366 (367)
T 3euc_A 356 QFLEAFAASLQ 366 (367)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhc
Confidence 99999988753
No 72
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.96 E-value=1.2e-28 Score=224.32 Aligned_cols=220 Identities=17% Similarity=0.233 Sum_probs=168.2
Q ss_pred hHHHhhhCCC-ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCC--CCccChhhhhhccccccC
Q 044773 2 YQLAQKRHLK-VKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSS--PGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~~~-~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~--~~~~~~~~~~~~~~~~~~ 78 (289)
+++++...++ ..++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ....++..+..
T Consensus 166 l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~------- 238 (412)
T 1yaa_A 166 FLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVE------- 238 (412)
T ss_dssp HHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHH-------
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHh-------
Confidence 4555555433 3444559999999999999999999999999999999999999876654 12223333322
Q ss_pred CCCC---ceEEEecCccccCCCCceEEEEE--e----cCHH----HHHHHHhc--cccCCCChHHHHHHHHHhCCchHH-
Q 044773 79 EVWN---RVHIVYSLSKDLGLPGFRVGAIY--S----NDDT----VVAAATKM--SSFGLVSSQTQYLLSALLSDKKFA- 142 (289)
Q Consensus 79 d~~~---~~i~i~s~sK~~g~~G~r~G~i~--~----~~~~----~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~- 142 (289)
..+ ++++++|+||.+|.+|+|+||++ + +++. +.+.+... ..+..++++.|.++..+++...+.
T Consensus 239 -~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 317 (412)
T 1yaa_A 239 -KLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTE 317 (412)
T ss_dssp -HTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHH
T ss_pred -cCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHH
Confidence 123 78999999999997799999998 7 1343 44444432 233445789999999999886421
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCC
Q 044773 143 --QNYISENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSS 216 (289)
Q Consensus 143 --~~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~ 216 (289)
.+++++.++.++++++++.+.|++++ +++..+++|+++|+.++. +.+..+++++||.+.|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~--- 383 (412)
T 1yaa_A 318 QWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTP-----------QMVKRLEETHAVYLVA--- 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCH-----------HHHHHHHHhCCEEecc---
Confidence 46788999999999999999999886 888889999999976531 2346677788999987
Q ss_pred CCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 217 CHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 217 f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
++||+++.++++++++++++|+++++.
T Consensus 384 -------~~Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 384 -------SGRASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp -------TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred -------CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence 469999866899999999999998764
No 73
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.96 E-value=6.5e-29 Score=224.63 Aligned_cols=216 Identities=16% Similarity=0.208 Sum_probs=167.1
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCC-CCccChhhhhhccccccCC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSS-PGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~~~~d 79 (289)
+++++... ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++ ....++..+..
T Consensus 162 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-------- 233 (396)
T 2q7w_A 162 LINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAA-------- 233 (396)
T ss_dssp HHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHH--------
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHh--------
Confidence 44555543 246788889999999999999999999999999999999999999876643 12223333321
Q ss_pred CCCceEEEecCccccCCCCceEEEEEe--cCH----HHHHHHHhc--cccCCCChHHHHHHHHHhCCc----hHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYS--NDD----TVVAAATKM--SSFGLVSSQTQYLLSALLSDK----KFAQNYIS 147 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~--~~~----~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~ 147 (289)
..+++++++|+||.+|++|+|+||+++ +++ .+.+.+... ..+..++++.|.++..+++.. .+ .++++
T Consensus 234 ~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~-~~~~~ 312 (396)
T 2q7w_A 234 MHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIW-EQELT 312 (396)
T ss_dssp HCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHH-HHHHH
T ss_pred cCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHH-HHHHH
Confidence 236889999999999999999999997 333 333333321 234445889999999999886 33 56788
Q ss_pred HHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 044773 148 ENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 223 (289)
Q Consensus 148 ~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~ 223 (289)
+.++.++++++++.+.|++.+ +++..+.+|+++|++++. +.+..+++++||.+.||
T Consensus 313 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~--------- 372 (396)
T 2q7w_A 313 DMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTK-----------EQVLRLREEFGVYAVAS--------- 372 (396)
T ss_dssp HC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT---------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCCH-----------HHHHHHHHhcCeeecCC---------
Confidence 899999999999999999986 788888999999987642 24556667889999874
Q ss_pred eEEEEEecCCHHHHHHHHHHHHHH
Q 044773 224 WFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 224 ~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
+||+++..+++++++++++|+++
T Consensus 373 -~Ris~~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 373 -GRVNVAGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp -CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred -ceEEEeecCHHHHHHHHHHHHhc
Confidence 59999856899999999999875
No 74
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.96 E-value=4.2e-28 Score=216.05 Aligned_cols=215 Identities=18% Similarity=0.275 Sum_probs=167.4
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++.+|++.|.++ ++|+||+|.++.+.+... .... +..+++++++|
T Consensus 128 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~---------~~~~~~i~~~S 194 (350)
T 3fkd_A 128 SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADI---------KGRKNLVMVYS 194 (350)
T ss_dssp TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGG---------TTCSSEEEEEE
T ss_pred CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHh---------hcCCCEEEEec
Confidence 4789999999999999999988888888887755 999999999876654332 1222 35588899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA-G 168 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 168 (289)
|||.+|++|+|+||+++ ++.+.+.+......+..+++.+.++..+++... .+.+..++.. ++++++.+.|+++ |
T Consensus 195 ~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~-~~~~~l~~~L~~~~~ 269 (350)
T 3fkd_A 195 FSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTPWAVNALAIEAAKFILIHPA---QFTLPIRKWQ-RNTVDFITALNRLDG 269 (350)
T ss_dssp SHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTT---TTCCCHHHHH-HHHHHHHHHHHHSTT
T ss_pred CchhccCcchheEeEEe-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCHH---HHHHHHHHHH-HHHHHHHHHHhcCCC
Confidence 99999999999999999 566677776665566688999999999998754 1233333344 7788899999888 8
Q ss_pred CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHH
Q 044773 169 ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 169 ~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 248 (289)
+++.++.+ .|+|+.++.. +..++...|++++||.+.||..|+..+++++||+++ ++++++++++.|++++
T Consensus 270 ~~~~~~~~-~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 339 (350)
T 3fkd_A 270 VEVHPSGT-TFFLLRLKKG-------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFL 339 (350)
T ss_dssp EEECCCSS-SEEEEEESSS-------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred cEECCCCC-cEEEEECCCC-------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHH
Confidence 88766655 5667887753 225688888865899999999998777899999997 5788888888888877
Q ss_pred HHHH
Q 044773 249 DSIT 252 (289)
Q Consensus 249 ~~~~ 252 (289)
++..
T Consensus 340 ~~~~ 343 (350)
T 3fkd_A 340 EKYE 343 (350)
T ss_dssp TC--
T ss_pred HHhc
Confidence 6543
No 75
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.96 E-value=3.3e-28 Score=219.98 Aligned_cols=217 Identities=14% Similarity=0.159 Sum_probs=164.7
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCC-CccChhhhhhccccccCC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSP-GFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~~~~d 79 (289)
+++++... ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+..
T Consensus 159 l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-------- 230 (394)
T 2ay1_A 159 MKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIAS-------- 230 (394)
T ss_dssp HHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHH--------
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhh--------
Confidence 45555544 2356777899999999999999999999999999999999999998765421 1123332321
Q ss_pred CCCceEEEecCccccCCCCceEEEEEe--cCHHH----HHHHHh--ccccCCCChHHHHHHHHHhCCch---HHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYS--NDDTV----VAAATK--MSSFGLVSSQTQYLLSALLSDKK---FAQNYISE 148 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~--~~~~~----~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~ 148 (289)
..+++++++|+||.+|++|+|+||+++ +++.+ ...+.. ...+..++++.|.++..+++... .+.++.++
T Consensus 231 ~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~ 310 (394)
T 2ay1_A 231 RIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEA 310 (394)
T ss_dssp HCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 235789999999999999999999998 44433 222221 12344458899999999998762 11567888
Q ss_pred HHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCe
Q 044773 149 NKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 224 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~ 224 (289)
.+++++++++++.+.|++++ +++..+.+|+++|++++. +.+..+++++||.+.||
T Consensus 311 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gi~v~~~---------- 369 (394)
T 2ay1_A 311 VRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATP-----------EQVKRIKEEFGIYMVGD---------- 369 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCH-----------HHHHHHHHhCCEEecCC----------
Confidence 99999999999999998874 777788889999987642 23455666889999874
Q ss_pred EEEEEecCCHHHHHHHHHHHHHH
Q 044773 225 FRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 225 ~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
+||+++.++++++++++++|+++
T Consensus 370 ~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 370 SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CeEEeecCCHhhHHHHHHHHHHc
Confidence 59999866899999999999875
No 76
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.96 E-value=1.6e-28 Score=222.55 Aligned_cols=208 Identities=21% Similarity=0.249 Sum_probs=155.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++|+|+++|||||||.+++ +|++.++.++++||+||+|.. +. ..++.. ..+++++++|
T Consensus 156 ~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~~-~~~l~~-----------~~~~~i~~~S 214 (391)
T 3bwn_A 156 KGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----PH-YTPITR-----------RQDHDIMLFT 214 (391)
T ss_dssp CSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----TT-TSCCCC-----------CBCCSEEEEE
T ss_pred CCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----CC-CCcccc-----------CCCCeEEEEe
Confidence 47899999999999999997 354422223399999999973 11 112111 2368899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc--cCCCChHHHHHHHHHhCCchH-------HHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--FGLVSSQTQYLLSALLSDKKF-------AQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~l 160 (289)
|||.+|++|+|+||++++++.+.+.+..... ..+++++.|.++..+++++.. .++++++.++.++++++.+
T Consensus 215 ~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 294 (391)
T 3bwn_A 215 FSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKL 294 (391)
T ss_dssp HHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHH
T ss_pred chhhcCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999845555555554433 355788999999999986531 1457889999999999999
Q ss_pred HHHHHhc-CCceecC-------------CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEE
Q 044773 161 VSGLEKA-GISCLKS-------------NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 226 (289)
Q Consensus 161 ~~~l~~~-g~~~~~~-------------~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~R 226 (289)
.+.|+++ ++++..| .+|+|+|++++.. . .+..+++++||.+.||..|+. +++++|
T Consensus 295 ~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~--~--------~~~~~l~~~gV~v~pg~~fg~-~~~~iR 363 (391)
T 3bwn_A 295 REVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE--T--------DLVSELRRHKVMSRAGERCGS-DKKHVR 363 (391)
T ss_dssp HHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS--C--------CHHHHHHHTTEECEEGGGGTC-CTTEEE
T ss_pred HHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH--H--------HHHHHHHHCCEEEccCCCCCC-CCCEEE
Confidence 9999987 5655443 4456899998741 1 344456688999999999975 568999
Q ss_pred EEEecCCHHHHHHHHHHHHHHHHH
Q 044773 227 VCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 227 is~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
|+++. +++++++++++|++++++
T Consensus 364 is~~~-~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 364 VSMLS-REDVFNVFLERLANMKLI 386 (391)
T ss_dssp EESCS-CHHHHHHHHHHHHSCC--
T ss_pred EEecC-CHHHHHHHHHHHHHHHHh
Confidence 99996 899999999999887654
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.95 E-value=2.4e-26 Score=203.22 Aligned_cols=202 Identities=19% Similarity=0.265 Sum_probs=152.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
.+++++++++||||||.+++.+ ++.++|+++++ +|+||+|+++...+.... +..+++++++|
T Consensus 134 ~~~~~v~i~~p~nptG~~~~~~---~l~~l~~~~~~-~ivDea~~~~~~~~~~~~--------------~~~~~~i~~~S 195 (337)
T 3p1t_A 134 SRDDCVVLANPSNPTGQALSAG---ELDQLRQRAGK-LLIDETYVDYSSFRARGL--------------AYGENELVFRS 195 (337)
T ss_dssp CTTEEEEEESSCTTTCCCCCHH---HHHHHHHHCSE-EEEECTTGGGSSCSSSCC--------------CCBTTEEEEEE
T ss_pred cCCCEEEEeCCCCCCCCCCCHH---HHHHHHHhCCc-EEEECCChhhcccccccc--------------ccCCCEEEEee
Confidence 5789999999999999999955 45555677776 566999997543322111 13467899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKAGI 169 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 169 (289)
+||.+|++|+|+||++++ +.+.+.+......+..+++.+.++..+++.... ..+..+.+.++++++.+.|+++|+
T Consensus 196 ~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~ 270 (337)
T 3p1t_A 196 FSKSYGLAGLRLGALFGP-SELIAAMKRKQWFCNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVADALRGLGY 270 (337)
T ss_dssp SSSTTCCTTTCCEEEECC-HHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CchhccCcchheEEEEeC-HHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHCcC
Confidence 999999999999999995 455556665555566888999999999987533 445555667778899999999899
Q ss_pred ceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHH
Q 044773 170 SCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 170 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 249 (289)
++.++.+++ +|+..+. . .++.. +++++||.+.||..|+. ++++||+++ ++++++.+++.|+++.+
T Consensus 271 ~~~~~~~~~-~~~~~~~---~------~~~~~-~l~~~gi~v~~g~~~~~--~~~iRis~~--~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 271 RVASSEANF-VLVENAA---G------ERTLR-FLRERGIQVKDAGQFGL--HHHIRISIG--REEDNDRLLAALAEYSD 335 (337)
T ss_dssp CBCCCSSSE-EEEECTT---T------HHHHH-HHHHTTEECEEGGGGTC--CSEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred EECCCCCeE-EEEEcCC---H------HHHHH-HHHHCCeEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHhh
Confidence 888887765 4455542 1 23444 45578999999999875 679999998 58999999999887653
No 78
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=5.2e-26 Score=203.30 Aligned_cols=209 Identities=19% Similarity=0.290 Sum_probs=161.6
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecC
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSL 90 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~ 90 (289)
+++++++++|+||||.+++ +++|.++|+++|+++|+||+|.++ .+.. ...... ..+++++++|+
T Consensus 149 ~~~~v~i~~p~nptG~~~~---~~~l~~l~~~~~~~li~De~~~~~--~~~~---~~~~~~--------~~~~~i~~~s~ 212 (360)
T 3hdo_A 149 EGKVFFLTTPNAPLGPSFP---LEYIDELARRCAGMLVLDETYAEF--AESN---ALELVR--------RHENVVVTRTL 212 (360)
T ss_dssp CSSEEEEESSCTTTCCCCC---HHHHHHHHHHBSSEEEEECTTGGG--SSCC---CTHHHH--------HCSSEEEEEES
T ss_pred CCCEEEEeCCCCCCCCCcC---HHHHHHHHHHCCCEEEEECChHhh--CCcc---hhHHhc--------cCCCEEEEecc
Confidence 5789999999999999999 556667778999999999999974 3332 222222 34788999999
Q ss_pred ccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 044773 91 SKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKAGIS 170 (289)
Q Consensus 91 sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 170 (289)
||.+|++|+|+||+++ ++.+.+.+......+..|++.+.++..+++.. +++++.++.++++++++.+.|+++|+.
T Consensus 213 sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~ 287 (360)
T 3hdo_A 213 SKSYSLAGMRIGLAIA-RPEVIAALDKIRDHYNLDRLAQAACVAALRDQ----AYLSECCRRIRETREWFTTELRSIGYD 287 (360)
T ss_dssp TTTTSCTTSCCEEEEC-CHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred hHhhcCCccceeeEee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 9999999999999999 55666666655555568899999999999873 457888899999999999999988888
Q ss_pred eecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 171 CLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 171 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
+.++.+ .++|+.++.. +..++...|. ++||.+.|+..+ ..++++||+++ +++++++++++|+++-+.
T Consensus 288 ~~~~~~-~~~~~~~~~~-------~~~~l~~~l~-~~gi~v~~~~~~--~~~~~iRis~~--~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 288 VIPSQG-NYLFATPPDR-------DGKRVYDGLY-ARKVLVRHFSDP--LLAHGMRISIG--TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp ECCCSS-SEEEEECTTC-------CHHHHHHHHH-HTTEECBCCCST--TTTTSEEEECC--CHHHHHHHHHHHHHHHC-
T ss_pred EcCCCc-cEEEEECCCC-------CHHHHHHHHH-HCCEEEEECCCC--CCCCEEEEEcC--CHHHHHHHHHHHHHHhcc
Confidence 776655 5677776632 1245676665 679999998762 34689999997 689999999999887665
Q ss_pred HHH
Q 044773 251 ITT 253 (289)
Q Consensus 251 ~~~ 253 (289)
.++
T Consensus 355 ~~~ 357 (360)
T 3hdo_A 355 HHH 357 (360)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 79
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.95 E-value=2.2e-26 Score=203.85 Aligned_cols=198 Identities=20% Similarity=0.303 Sum_probs=154.0
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++||||||.+++.+++++|+++| + ++|+||+|+++.. + +...... ..+++++++|
T Consensus 137 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~---~-~li~De~~~~~~~-~----~~~~~~~--------~~~~~i~~~s 199 (335)
T 1uu1_A 137 GEGDVVFIPNPNNPTGHVFEREEIERILKTG---A-FVALDEAYYEFHG-E----SYVDFLK--------KYENLAVIRT 199 (335)
T ss_dssp CTTEEEEEESSCTTTCCCCCHHHHHHHHHTT---C-EEEEECTTHHHHC-C----CCGGGGG--------TCSSEEEEEE
T ss_pred CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC---C-EEEEECcchhhcc-h----hHHHHhh--------hCCCEEEEec
Confidence 3689999999999999999988888888776 7 8999999997532 1 2222222 3467899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKAGI 169 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 169 (289)
+||.+|++|+|+||++++ +.+.+.+......++.|++.|.++..+++.. +++++.++.++++++++.+.|++.|+
T Consensus 200 ~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~ 274 (335)
T 1uu1_A 200 FSKAFSLAAQRVGYVVAS-EKFIDAYNRVRLPFNVSYVSQMFAKVALDHR----EIFEERTKFIVEERERMKSALREMGY 274 (335)
T ss_dssp STTTTTCGGGCCEEEEEC-HHHHHHHHHHSCTTCSCHHHHHHHHHHHHTH----HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred chhhcCCcccCeEEEEeC-HHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 999999999999999994 5556555554444568889999999999873 34677888899999999999988888
Q ss_pred ceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 170 SCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 170 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
.+.+ .+|+|+|++++. .+..++...|. ++||.+.| .++++||+++. ++++++++++|+++
T Consensus 275 ~~~~-~~~~~~~~~~~~-------~~~~~~~~~l~-~~gi~v~~-------~~~~iRis~~~--~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 275 RITD-SRGNFVFVFMEK-------EEKERLLEHLR-TKNVAVRS-------FREGVRITIGK--REENDMILRELEVF 334 (335)
T ss_dssp CBCC-CCSSEEEEECCT-------HHHHHHHHHHH-HHTEEEEE-------ETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred EEcC-CCCeEEEEECCC-------CCHHHHHHHHH-HCCEEEEE-------CCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence 7654 456788998864 12346777776 56999998 24689999973 67899999988753
No 80
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.94 E-value=1.3e-25 Score=201.55 Aligned_cols=210 Identities=18% Similarity=0.215 Sum_probs=159.4
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++..+ ++++|++++|+||||.+++.+++.+| |+.+++++|+||+|+++.++ .+...+.. ..
T Consensus 156 l~~~i~~~-~~~~v~~~~~~nptG~~~~~~~l~~l---~~~~~~~li~De~~~~~~~~----~~~~~~~~--------~~ 219 (369)
T 3cq5_A 156 ALEEIRAK-QPDIVFVTTPNNPTGDVTSLDDVERI---INVAPGIVIVDEAYAEFSPS----PSATTLLE--------KY 219 (369)
T ss_dssp HHHHHHHH-CCSEEEEESSCTTTCCCCCHHHHHHH---HHHCSSEEEEECTTGGGCCS----CCGGGGTT--------TC
T ss_pred HHHHhhcc-CCCEEEEeCCCCCCCCCCCHHHHHHH---HHhCCCEEEEECCchhhcCC----cchHHHHh--------hC
Confidence 34555542 58999999999999999995555555 55566999999999976432 23333322 33
Q ss_pred C-ceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Q 044773 82 N-RVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 82 ~-~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 160 (289)
+ ++++++|+||.+|++|+|+||++++++ +.+.+......+..|++.+.++..+++.. +++++.+++++++++++
T Consensus 220 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l 294 (369)
T 3cq5_A 220 PTKLVVSRTMSKAFDFAGGRLGYFVANPA-FIDAVMLVRLPYHLSALSQAAAIVALRHS----ADTLGTVEKLSVERVRV 294 (369)
T ss_dssp TTTEEEEEESSSTTSCGGGCCEEEEECTH-HHHHHHTTSCTTCSCHHHHHHHHHHHHTH----HHHHTHHHHHHHHHHHH
T ss_pred CCCEEEEEechHhcCCcccceEEEEeCHH-HHHHHHHcCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHH
Confidence 5 789999999999989999999999754 45555554444558889999999999863 45778888999999999
Q ss_pred HHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHH
Q 044773 161 VSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLS 240 (289)
Q Consensus 161 ~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~ 240 (289)
.+.|++.|+++.++. |.++|++++. + ..++...|. ++||.+.|| + .++++||+++ ++++++++
T Consensus 295 ~~~L~~~g~~~~~~~-~~~~~~~~~~--~------~~~l~~~l~-~~gi~v~~~---~--~~~~iRis~~--~~~~i~~~ 357 (369)
T 3cq5_A 295 AARLEELGYAVVPSE-SNFVFFGDFS--D------QHAAWQAFL-DRGVLIRDV---G--IAGHLRTTIG--VPEENDAF 357 (369)
T ss_dssp HHHHHHHTCEEECCS-SSEEEEECCS--S------HHHHHHHHH-HTTEECBCC---S--CTTEEEEECC--CHHHHHHH
T ss_pred HHHHHhCCCEECCCC-CeEEEEECCC--C------HHHHHHHHH-HCCEEEEEC---C--CCCeEEEEeC--CHHHHHHH
Confidence 999988888887554 4677888761 1 245777664 779999998 2 2579999998 68999999
Q ss_pred HHHHHHHHH
Q 044773 241 MQRLKAFVD 249 (289)
Q Consensus 241 l~~l~~~l~ 249 (289)
+++|+++++
T Consensus 358 ~~~l~~~~~ 366 (369)
T 3cq5_A 358 LDAAAEIIK 366 (369)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999988764
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.94 E-value=6.4e-27 Score=214.44 Aligned_cols=204 Identities=17% Similarity=0.221 Sum_probs=158.5
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++|+|+++|||||||.+++ +.+ + ++..+.|++|.+ ...++..+ ..+++++++|
T Consensus 195 ~~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~------~~~s~~~~----------~~~~~i~~~S 248 (427)
T 2hox_A 195 PEQYIEMVTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW------PHYTPIKY----------KADEDILLFT 248 (427)
T ss_dssp GGGEEEEEESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS------TTTSCCCS----------CBCCSEEEEE
T ss_pred CCceEEEEcCCCCCcccccH-HHH-------c--CCCEEEeecccC------CCCCcccc----------CCCceEEEEe
Confidence 36899999999999999999 422 2 567888887752 12232222 1478899999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcccc--CCCChHHHHHHHHHhCCch-HH-------HHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSSF--GLVSSQTQYLLSALLSDKK-FA-------QNYISENKKRLKQRHRK 159 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~-~~-------~~~~~~~~~~~~~~~~~ 159 (289)
|||.+|++|+|+||++++++.+.+.+...... ..++.+.|.++..+|++.. ++ ++++++.++.+++++++
T Consensus 249 ~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
T 2hox_A 249 MSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVN 328 (427)
T ss_dssp HHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHH
T ss_pred ChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999766666666554432 4578899999999988642 11 45678889999999999
Q ss_pred HHHHHHhc-CCce--------------ecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCe
Q 044773 160 LVSGLEKA-GISC--------------LKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 224 (289)
Q Consensus 160 l~~~l~~~-g~~~--------------~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~ 224 (289)
+.+.|++. |+.+ ..|++|+|+|++++.. . .+++..+++++||.+.||..|+. ++++
T Consensus 329 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~--~------~~~~~~ll~~~gI~v~pg~~f~~-~~~~ 399 (427)
T 2hox_A 329 ITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE--E------DKDCYQTFQNGRINTQNGVGFEA-SSRY 399 (427)
T ss_dssp HHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG--G------GCSHHHHHHHTTEECEEGGGGTS-CTTE
T ss_pred HHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCc--H------HHHHHHHHHHCCEEEcCCCccCC-CCCE
Confidence 99999987 5543 3566799999999751 1 23677788788999999999986 6789
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHHH
Q 044773 225 FRVCFANMSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 225 ~Ris~~~~~~e~l~~~l~~l~~~l~ 249 (289)
+||+++. +++++++++++|+++++
T Consensus 400 ~Ris~~~-~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 400 VRLSLIK-TQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp EEEECSS-CHHHHHHHHHHHHHHHT
T ss_pred EEEEecC-CHHHHHHHHHHHHHHHh
Confidence 9999996 89999999999998864
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.94 E-value=3.8e-25 Score=200.23 Aligned_cols=222 Identities=14% Similarity=0.078 Sum_probs=164.5
Q ss_pred hHHHhhhCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHL--KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++.... ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|+.+.++ ....++.+...
T Consensus 162 l~~~l~~~~~~~~~~v~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~-------- 229 (398)
T 3a2b_A 162 LRAKLSRLPEDSAKLICTDGIFSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIG-HKGAGTASHFG-------- 229 (398)
T ss_dssp HHHHHHTSCSSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSS-GGGCCHHHHHT--------
T ss_pred HHHHHHhhccCCceEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccC-CCCCchHhhcC--------
Confidence 455565432 6899999999999999998 899999999999999999999876553 21233333321
Q ss_pred CCCc-eEEEecCccccCCCCceEEEEEecCHHHHHHHHhc-c--ccCCCChHHHH-HHHHHhCCchHHHHHHHHHHHHHH
Q 044773 80 VWNR-VHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM-S--SFGLVSSQTQY-LLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 80 ~~~~-~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~-~--~~~~~~~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
..++ +++++||||.+|.+| ||+++++ .+.+.+... . .....+++.|. ++..+++. .++.++.++.++
T Consensus 230 ~~~~~di~~~s~sK~~~~~G---G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~ 301 (398)
T 3a2b_A 230 LNDDVDLIMGTFSKSLASLG---GFVAGDA-DVIDFLKHNARSVMFSASMTPASVASTLKALEI----IQNEPEHIEKLW 301 (398)
T ss_dssp CGGGCSEEEEESSSTTCSSC---EEEEECH-HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH----HHHCTHHHHHHH
T ss_pred CCcCCeEEEecccccccCCC---cEEEeCH-HHHHHHHHhcccceecCCCCHHHHHHHHHHHHH----HhhCHHHHHHHH
Confidence 2234 699999999999778 9999964 444444432 1 22234555665 45566654 234667889999
Q ss_pred HHHHHHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEEec-C
Q 044773 155 QRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN-M 232 (289)
Q Consensus 155 ~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-~~~~~Ris~~~-~ 232 (289)
++++++.+.|++.|+++.++. |+++|+.++.. .+..++...|+++ ||.+.||..|+.. +++++||+++. +
T Consensus 302 ~~~~~l~~~L~~~g~~~~~~~-g~~~~~~~~~~------~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~ 373 (398)
T 3a2b_A 302 KNTDYAKAQLLDHGFDLGATE-SPILPIFIRSN------EKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATH 373 (398)
T ss_dssp HHHHHHHHHHHHTTCCBCSCC-SSEEEEECCCH------HHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTC
T ss_pred HHHHHHHHHHHhcCCCcCCCC-CCEEEEEcCCH------HHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCC
Confidence 999999999998888887776 57888988642 2235678888755 9999999888642 35799999975 6
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 044773 233 SEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 233 ~~e~l~~~l~~l~~~l~~~ 251 (289)
+++++++++++|++++++.
T Consensus 374 ~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 374 TYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp CHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998754
No 83
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.93 E-value=4.7e-25 Score=199.21 Aligned_cols=215 Identities=13% Similarity=0.088 Sum_probs=158.3
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecC
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSL 90 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~ 90 (289)
++++|++++|+||||.+++ +++|+++|+++|+++|+||+|+.. +.+....+..+...- ..+.+++++|+
T Consensus 175 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~-------~~~~di~~~s~ 243 (399)
T 3tqx_A 175 RFKLIATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVG-FIGENGRGTPEYCGV-------ADRVDILTGTL 243 (399)
T ss_dssp SSEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTT-TSSTTSCCHHHHHTC-------TTCCSEEEEES
T ss_pred CceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCcccc-ccCCCCCchHHhhCC-------CCCCcEEEecc
Confidence 6899999999999999999 999999999999999999999732 323333334443220 12556999999
Q ss_pred ccccC-CCCceEEEEEecCHHHHHHHHhc-ccc---CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 91 SKDLG-LPGFRVGAIYSNDDTVVAAATKM-SSF---GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 91 sK~~g-~~G~r~G~i~~~~~~~~~~~~~~-~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 165 (289)
||.+| ++| ||++++++ +.+.+... ..+ ...+++.+.++...++.. .++.++.+++++++++++.+.|+
T Consensus 244 sK~~~g~~g---G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~ 316 (399)
T 3tqx_A 244 GKALGGASG---GYTSGHKE-IIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL---KTEGPQLRKQLQENSRYFRAGME 316 (399)
T ss_dssp SSSSCSSCC---EEEEECHH-HHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhcccCce---EEEEcCHH-HHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHH
Confidence 99998 555 99999654 44444332 222 235556655665555532 25578889999999999999999
Q ss_pred hcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeEEEEEe-cCCHHHHHHHHHH
Q 044773 166 KAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWFRVCFA-NMSEDTLKLSMQR 243 (289)
Q Consensus 166 ~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~~Ris~~-~~~~e~l~~~l~~ 243 (289)
+.|+++.++.++ ++|+.++... +..+++..|++ +||.+.|+.++. ..+++++||+++ .++++++++++++
T Consensus 317 ~~g~~~~~~~~~-~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~ 388 (399)
T 3tqx_A 317 KLGFQLVPGNHP-IIPVMLGDAQ------LATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEA 388 (399)
T ss_dssp HHTCCBCCCSSS-EEEEEEECHH------HHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHH
T ss_pred HcCCCcCCCCCC-EEEEEeCCHH------HHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHH
Confidence 999888866665 5667776432 23568888875 699999876554 344579999997 4699999999999
Q ss_pred HHHHHHHH
Q 044773 244 LKAFVDSI 251 (289)
Q Consensus 244 l~~~l~~~ 251 (289)
|++++++.
T Consensus 389 l~~~~~~~ 396 (399)
T 3tqx_A 389 FGQVGKKL 396 (399)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998764
No 84
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.92 E-value=8.7e-24 Score=189.90 Aligned_cols=219 Identities=13% Similarity=0.165 Sum_probs=164.9
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+. .++ +..
T Consensus 137 l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----~~~------------~~~ 197 (386)
T 2dr1_A 137 LDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGGAD----IKF------------DKW 197 (386)
T ss_dssp HHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBC----CCT------------TTT
T ss_pred HHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccCcc----ccc------------ccc
Confidence 4566655568999999999999999988 899999999999999999999854221 121 123
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHH----------------H----hccccCCCChHHHHHHHHHhCCchH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAA----------------T----KMSSFGLVSSQTQYLLSALLSDKKF 141 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~----------------~----~~~~~~~~~~~~q~~~~~~l~~~~~ 141 (289)
+.++++.|+||.++.+ .++||++++++ +.+.+ . .....++.+.+.+.++..+++..
T Consensus 198 ~~di~~~s~sK~~~~~-~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-- 273 (386)
T 2dr1_A 198 GLDVVFSSSQKAFGVP-PGLAIGAFSER-FLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRII-- 273 (386)
T ss_dssp TCSEEEEETTSTTCCC-SSCEEEEECHH-HHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHH--
T ss_pred CCcEEEEeccccccCC-CceEEEEECHH-HHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH--
Confidence 5679999999999855 23899999654 43332 1 11223446778888888777642
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHhcCCceecCC---ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCC
Q 044773 142 AQNY--ISENKKRLKQRHRKLVSGLEKAGISCLKSN---AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSS 216 (289)
Q Consensus 142 ~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~ 216 (289)
.++ +++.+++++++++++.+.|++.|+++..++ .+.++|+.++...+ ..++...|.++ ||.+.||..
T Consensus 274 -~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~-gi~v~~~~~ 345 (386)
T 2dr1_A 274 -EKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGIK------GDEVYEAMRKR-GFELAKGYG 345 (386)
T ss_dssp -HHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTCC------HHHHHHHHHHT-TEECEECCG
T ss_pred -HHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCCC------HHHHHHHHHHC-CeEEecCcc
Confidence 333 678889999999999999998888877765 36678888864222 24678887755 999999986
Q ss_pred CCCCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 217 CHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 217 f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+. .++++||+++. ++++++++++++|++++++...
T Consensus 346 ~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 346 SV--KEKTFRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp GG--TTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 53 35799999974 6999999999999999887643
No 85
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.92 E-value=4.5e-24 Score=193.35 Aligned_cols=225 Identities=11% Similarity=0.031 Sum_probs=159.7
Q ss_pred hHHHhhhC--CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRH--LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++... +++++|++++|+||||.+++ +++|+++|+++|+++|+||+|+...++ +....+..... .
T Consensus 167 le~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~-~~g~~~~~~~~-~------ 235 (401)
T 2bwn_A 167 LRELIAADDPAAPKLIAFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYG-PRGAGVAERDG-L------ 235 (401)
T ss_dssp HHHHHHHSCTTSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSS-TTSCCHHHHHT-C------
T ss_pred HHHHHHhhccCCceEEEEecCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccC-CCCceeeeccC-c------
Confidence 45555532 36899999999999999999 899999999999999999999954342 22222222111 0
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc---cc-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS---SF-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQ 155 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~---~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 155 (289)
..+.+++++||||++|++| ||++++ +.+.+.+.... .+ ...+++.+.++..+++... ...+++.++++++
T Consensus 236 ~~~~~i~~~s~sK~~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~ 309 (401)
T 2bwn_A 236 MHRIDIFNGTLAKAYGVFG---GYIAAS-ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLK--TAEGQKLRDAQQM 309 (401)
T ss_dssp GGGCSEEEEESSSTTCSCC---EEEEEC-HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHT--SHHHHHHHHHHHH
T ss_pred cccCcEEEeechhhccCCC---CEEecC-HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHH--hcccHHHHHHHHH
Confidence 1134688999999999888 999995 44444443221 11 1244566666666664321 1124677888999
Q ss_pred HHHHHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEEec-CC
Q 044773 156 RHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN-MS 233 (289)
Q Consensus 156 ~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-~~~~~Ris~~~-~~ 233 (289)
+++++.+.|++.|+++.++.++ ++|+.++.. .+..++...|++++||.+.|+..|+.. +.+++||+++. ++
T Consensus 310 ~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~------~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t 382 (401)
T 2bwn_A 310 HAKVLKMRLKALGMPIIDHGSH-IVPVVIGDP------VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHD 382 (401)
T ss_dssp HHHHHHHHHHHHTCCBCCCSSS-CEEEECCCH------HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSC
T ss_pred HHHHHHHHHHHCCCcccCCCCC-eEEEEeCCh------HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCC
Confidence 9999999998888888877776 677887642 223467777776779999999877653 34699999974 69
Q ss_pred HHHHHHHHHHHHHHHHH
Q 044773 234 EDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 234 ~e~l~~~l~~l~~~l~~ 250 (289)
++++++++++|++++++
T Consensus 383 ~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 383 LKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp HHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988654
No 86
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=2e-24 Score=195.55 Aligned_cols=212 Identities=12% Similarity=0.075 Sum_probs=157.4
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCC-CCcc-CCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYS-GTVF-SSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~-~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+ ++.. ++....+...+ ..+.+++++
T Consensus 177 ~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~----------~~~~di~~~ 243 (401)
T 1fc4_A 177 RHVLIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDV----------MGRVDIITG 243 (401)
T ss_dssp SSEEEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTC----------TTCCSEEEE
T ss_pred CceEEEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCC----------CcCCcEEEe
Confidence 5899999999999999999 9999999999999999999996 6532 23222111112 124579999
Q ss_pred cCcccc-CCCCceEEEEEecCHHHHHHHHhcc-c---cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDL-GLPGFRVGAIYSNDDTVVAAATKMS-S---FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSG 163 (289)
Q Consensus 89 s~sK~~-g~~G~r~G~i~~~~~~~~~~~~~~~-~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (289)
|+||.+ |.+| ||++++ +.+.+.+.... . ....+++.+.++..+++.. .. .++.+++++++++++.+.
T Consensus 244 s~sK~~~~~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~~~~~~~~~~~~~~l~~~ 315 (401)
T 1fc4_A 244 TLGKALGGASG---GYTAAR-KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV---EA-GSELRDRLWANARQFREQ 315 (401)
T ss_dssp ESSSTTCSSSC---EEEEEC-HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH---HT-CHHHHHHHHHHHHHHHHH
T ss_pred cchhhccCCCC---EEEEcC-HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHH
Confidence 999999 5555 999995 45555444322 1 2346778888888777642 11 466788899999999999
Q ss_pred HHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEEec-CCHHHHHHHH
Q 044773 164 LEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN-MSEDTLKLSM 241 (289)
Q Consensus 164 l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-~~~~~Ris~~~-~~~e~l~~~l 241 (289)
|++.|+++.+ ..+.++|++++.. .+..++...|. ++||.+.|+..|+.. ..+++||+++. ++++++++++
T Consensus 316 L~~~g~~~~~-~~~~~~~~~~~~~------~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~ 387 (401)
T 1fc4_A 316 MSAAGFTLAG-ADHAIIPVMLGDA------VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAV 387 (401)
T ss_dssp HHHTTCCBCC-SSSSEEEEEEECH------HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHH
T ss_pred HHHcCCcccC-CCCCEEEEEcCCh------HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHH
Confidence 9988888774 5566788888642 22345777776 559999999887643 34689999974 6999999999
Q ss_pred HHHHHHHHHH
Q 044773 242 QRLKAFVDSI 251 (289)
Q Consensus 242 ~~l~~~l~~~ 251 (289)
++|++++++.
T Consensus 388 ~~l~~~~~~~ 397 (401)
T 1fc4_A 388 EAFTRIGKQL 397 (401)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 87
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.92 E-value=4.4e-24 Score=192.70 Aligned_cols=215 Identities=13% Similarity=0.129 Sum_probs=159.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++... ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|. + + ....++ +..
T Consensus 151 l~~~l~~~-~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~-~--g-~~~~~~------------~~~ 210 (393)
T 1vjo_A 151 LRTALETH-RPAILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTS-L--G-GVPIFL------------DAW 210 (393)
T ss_dssp HHHHHHHH-CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTT-T--T-TSCCCT------------TTT
T ss_pred HHHHHhhC-CceEEEEeccCCCcceecc---HHHHHHHHHHcCCEEEEECCcc-c--c-CcCCcc------------ccc
Confidence 44555542 5889999999999999998 8999999999999999999998 2 2 221221 123
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc---------------------cccC-CCChHHHHHHHHHhCCc
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM---------------------SSFG-LVSSQTQYLLSALLSDK 139 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~---------------------~~~~-~~~~~~q~~~~~~l~~~ 139 (289)
+.+++++|+||.++.+| |+||++++++ +.+.+... .... +.+.+.+.++..+++..
T Consensus 211 ~~di~~~s~sK~l~~~~-~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~ 288 (393)
T 1vjo_A 211 GVDLAYSCSQKGLGCSP-GASPFTMSSR-AIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLI 288 (393)
T ss_dssp TCSEEECCSSSTTCSCS-SCEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH
T ss_pred CccEEEEcCcccccCCC-ceEEEEECHH-HHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 56789999999998677 9999999654 44444211 1112 46778888888888753
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCc---eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCC
Q 044773 140 KFAQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNA---GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSS 216 (289)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~ 216 (289)
. ..++++.+++++++++++.+.|++.|+++..+.+ +.++++.++...+ ..++...|++++||.+.||..
T Consensus 289 ~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~gi~v~~g~~ 360 (393)
T 1vjo_A 289 A--QEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVD------GKAVARRLLNEHNIEVGGGLG 360 (393)
T ss_dssp H--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCC------HHHHHHHHHHHHCEECEECCG
T ss_pred H--HccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCCC------HHHHHHHHHhhCCEEEecCcc
Confidence 1 3347788899999999999999988888877664 3456677653222 246788887666999999987
Q ss_pred CCCCCCCeEEEEE-ec-CCHHHHHHHHHHHHHHH
Q 044773 217 CHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 217 f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l 248 (289)
|. .++++||++ +. .+++++++++++|++++
T Consensus 361 ~~--~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 361 EL--AGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp GG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred cc--CCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 64 367999995 43 47778999999998875
No 88
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.91 E-value=3.2e-24 Score=194.96 Aligned_cols=221 Identities=17% Similarity=0.155 Sum_probs=155.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++... ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+...++ ..........+- ..
T Consensus 178 le~~l~~~-~~~~vi~~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g-~~g~~~~~~~~~-------~~ 245 (409)
T 3kki_A 178 LRMLIQRH-GPGIIVVDSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHG-PNGAGLLAELGL-------TR 245 (409)
T ss_dssp HHHHHHHH-CSCEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSS-GGGCCHHHHHTC-------GG
T ss_pred HHHHHHhc-CCeEEEECCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccC-CCCCcchhhcCC-------CC
Confidence 45666543 4699999999999999999 999999999999999999999874442 212222222210 12
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc--c-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS--F-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~--~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
+.++++.|+||++|.+| ||++++++.+......... + ...+++...++.+.++.. +. ..+.++.++++++
T Consensus 246 ~~di~~~s~sK~~~~~g---g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~---~~-~~~~~~~~~~~~~ 318 (409)
T 3kki_A 246 EVHFMTASLAKTFAYRA---GAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII---ES-ADNRRQHLDRMAR 318 (409)
T ss_dssp GCSEEEEESSSTTCSSC---EEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH---HH-CHHHHHHHHHHHH
T ss_pred CCCEEEeecchhhCCCc---eEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHH
Confidence 45688999999998665 9999976544332222111 1 124455555555555432 22 3678888999999
Q ss_pred HHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeEEEEEec-CCHHH
Q 044773 159 KLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWFRVCFAN-MSEDT 236 (289)
Q Consensus 159 ~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~~Ris~~~-~~~e~ 236 (289)
++.+.|++.|+++. ..+.++|+.++... +..++...|+++ ||.+.|+..+. +.+.+++||+++. +++++
T Consensus 319 ~l~~~L~~~g~~~~--~~~~~~~~~~~~~~------~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~ 389 (409)
T 3kki_A 319 KLRIGLSQLGLTIR--SESQIIGLETGDER------NTEKVRDYLESN-GVFGSVFCRPATSKNKNIIRLSLNSDVNDEQ 389 (409)
T ss_dssp HHHHHHHTTTCCCC--CSSSEEEEEEESHH------HHHHHHHHHHHT-TEECEEECTTSSCTTCEEEEEECCTTCCHHH
T ss_pred HHHHHHHHcCCccC--CCCCEEEEEeCCHH------HHHHHHHHHHHC-CceEeeeCCCCcCCCCcEEEEEccCCCCHHH
Confidence 99999999887765 35667788776432 224577777755 99998865442 2446799999964 68999
Q ss_pred HHHHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFVDS 250 (289)
Q Consensus 237 l~~~l~~l~~~l~~ 250 (289)
+++++++|+++++.
T Consensus 390 i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 390 IAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998864
No 89
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.91 E-value=2.5e-24 Score=197.02 Aligned_cols=226 Identities=15% Similarity=0.139 Sum_probs=164.0
Q ss_pred hHHHhhhCC--CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHL--KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++.... ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+.+.++. ...+..+...-
T Consensus 183 le~~l~~~~~~~~~~v~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~-~g~~~~~~~~~------- 251 (427)
T 2w8t_A 183 LDKRLGRLPKEPAKLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGP-NGRGVYEAQGL------- 251 (427)
T ss_dssp HHHHHHTSCSSSCEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST-TSCCHHHHTTC-------
T ss_pred HHHHHHhccCCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCC-CCCchHhhcCC-------
Confidence 456665432 6899999999999999999 9999999999999999999999875542 22334433220
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc-cc---cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM-SS---FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQ 155 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~-~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 155 (289)
..+.+++++||||++|++| ||++++++. .+.+... .. ....+++.+.++..+++... +.++.++++++
T Consensus 252 ~~~~di~~~s~sK~~g~~g---G~v~~~~~l-~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~----~~~~~~~~~~~ 323 (427)
T 2w8t_A 252 EGQIDFVVGTFSKSVGTVG---GFVVSNHPK-FEAVRLACRPYIFTASLPPSVVATATTSIRKLM----TAHEKRERLWS 323 (427)
T ss_dssp TTCCSEEEEESSSTTCSCC---EEEEECCTT-GGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT----SCHHHHHHHHH
T ss_pred CcCCcEEEecchhhhccCC---CEEEeCHHH-HHHHHHhcccccccCCCCHHHHHHHHHHHHHHh----cCHHHHHHHHH
Confidence 2255899999999999778 999996544 3333322 11 12355565555556665321 24677888999
Q ss_pred HHHHHHHHHHhcCCcee-cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEEec-C
Q 044773 156 RHRKLVSGLEKAGISCL-KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN-M 232 (289)
Q Consensus 156 ~~~~l~~~l~~~g~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-~~~~~Ris~~~-~ 232 (289)
+++++.+.|++.|+++. ++..|.++|+.++.. .+..+++..|+++ ||.+.|+..|+.. +.+++||+++. +
T Consensus 324 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRi~~~~~~ 396 (427)
T 2w8t_A 324 NARALHGGLKAMGFRLGTETCDSAIVAVMLEDQ------EQAAMMWQALLDG-GLYVNMARPPATPAGTFLLRCSICAEH 396 (427)
T ss_dssp HHHHHHHHHHHHTCEESCSSCCSSEEEEEESSH------HHHHHHHHHHHHT-TEECEEECTTTSCTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHcCCcccCCCCCCCEEEEEECCH------HHHHHHHHHHHHC-CeEEeeeCCCCCCCCCeEEEEEeCCCC
Confidence 99999999998888877 441445778887642 2235678887755 9999999877643 35689999975 6
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q 044773 233 SEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 233 ~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+++++++++++|++++++...
T Consensus 397 t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 397 TPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999887654
No 90
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.91 E-value=1.1e-23 Score=189.69 Aligned_cols=218 Identities=11% Similarity=0.073 Sum_probs=157.2
Q ss_pred hHHHhhhCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHL-KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~-~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++...+ +++++++++||||||.+++ +++|+++|+++|+++|+||+|+.+.++ ....++.+...
T Consensus 158 l~~~l~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~--------- 224 (384)
T 1bs0_A 158 LARLLASPCPGQQMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIG-EQGRGSCWLQK--------- 224 (384)
T ss_dssp HHHHHHSCCSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSS-GGGCCHHHHTT---------
T ss_pred HHHHHHhcCCCCeEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceec-CCCCchHHhcC---------
Confidence 455665442 4788899999999999999 899999999999999999999865332 11112222211
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc-cc---CCCChHHHHHHHHHhCCchHHHH-HHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS-SF---GLVSSQTQYLLSALLSDKKFAQN-YISENKKRLKQ 155 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~-~~---~~~~~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~ 155 (289)
.+.+++++|+||.+|.+| ||++++ +.+.+.+.... .+ ...+++.+.++.++++.. .+ +.++.++++++
T Consensus 225 ~~~di~~~s~sK~~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~ 297 (384)
T 1bs0_A 225 VKPELLVVTFGKGFGVSG---AAVLCS-STVADYLLQFARHLIYSTSMPPAQAQALRASLAVI---RSDEGDARREKLAA 297 (384)
T ss_dssp CCCSEEEEESSSTTSSCC---EEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH---HSHHHHHHHHHHHH
T ss_pred CCCcEEEeeccchhhccC---cEEEeC-HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHH---hccccHHHHHHHHH
Confidence 134488999999999777 999996 44444443321 22 236778887777777542 21 56778889999
Q ss_pred HHHHHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEEec-CC
Q 044773 156 RHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFAN-MS 233 (289)
Q Consensus 156 ~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~~~Ris~~~-~~ 233 (289)
+++++.+.|+++|+++.++ ++.++|+.++.. .+..++...|.+ +||.+.|+..|+. .+.+++||+++. ++
T Consensus 298 ~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~------~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~ 369 (384)
T 1bs0_A 298 LITRFRAGVQDLPFTLADS-CSAIQPLIVGDN------SRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARLRLTLTAAHE 369 (384)
T ss_dssp HHHHHHHHHTTSSCEECSC-CSSBCCEEEESH------HHHHHHHHHHHH-TTEECCEECTTSSCTTCEEECCBCCTTCC
T ss_pred HHHHHHHHHHhcCCcccCC-CCCEEEEEeCCH------HHHHHHHHHHHH-CCcEEEeecCCCCCCCCceEEEEEcCCCC
Confidence 9999999999888887654 455667777532 223567777774 5999999988763 235789999974 58
Q ss_pred HHHHHHHHHHHHHH
Q 044773 234 EDTLKLSMQRLKAF 247 (289)
Q Consensus 234 ~e~l~~~l~~l~~~ 247 (289)
++++++++++|+++
T Consensus 370 ~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 370 MQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999764
No 91
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.91 E-value=2.7e-23 Score=185.11 Aligned_cols=216 Identities=12% Similarity=0.128 Sum_probs=156.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++..++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ..++. ..
T Consensus 122 l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~------------~~ 182 (366)
T 1m32_A 122 IDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIA------------AL 182 (366)
T ss_dssp HHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTT------------TT
T ss_pred HHHHHhcCCCeEEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccc------------cc
Confidence 4566666556899999999999999999 88999999999999999999984311 11211 22
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc------------------c--cCCCChHHHHHHHHHhCCchH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS------------------S--FGLVSSQTQYLLSALLSDKKF 141 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~------------------~--~~~~~~~~q~~~~~~l~~~~~ 141 (289)
+.++++.|+||.++ ++.++||++++++.+ +.+.... . .+..+...+.++..+++..
T Consensus 183 ~~di~~~s~~K~~~-~~~g~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-- 258 (366)
T 1m32_A 183 HIDYLISSANKCIQ-GVPGFAFVIAREQKL-AACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKEL-- 258 (366)
T ss_dssp TCSEEEEESSSTTC-CCSSEEEEEEEHHHH-TTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH--
T ss_pred CccEEEecCccccc-CCCceEEEEECHHHH-HhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHH--
Confidence 45689999999884 334579999965433 2221110 0 1335667777777776542
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHhcCCceecC---CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCC
Q 044773 142 AQNY--ISENKKRLKQRHRKLVSGLEKAGISCLKS---NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSS 216 (289)
Q Consensus 142 ~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~ 216 (289)
..+ +++.+++++++++++.+.|+++|+++..+ .+++++|+.++... . .+..++...|. ++||.+.||..
T Consensus 259 -~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~l~-~~gi~v~~~~~ 332 (366)
T 1m32_A 259 -AKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDP-Q---YRFSEFYRRLK-EQGFVIYPGKV 332 (366)
T ss_dssp -HHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCT-T---CCHHHHHHHHH-HTTEECEECCC
T ss_pred -HHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccC-C---CCHHHHHHHHH-HCCEEEECCcC
Confidence 333 57788899999999999999888777654 35678889887410 0 12245777776 55999999987
Q ss_pred CCCCCCCeEEEEEec-CCHHHHHHHHHHHHHHHH
Q 044773 217 CHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 217 f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 249 (289)
|+ ++++||+++. ++++++++++++|+++++
T Consensus 333 ~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 333 SQ---SDCFRIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp SS---SCEEEEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred CC---CCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 73 5799999975 589999999999988764
No 92
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.91 E-value=9.8e-23 Score=183.66 Aligned_cols=218 Identities=15% Similarity=0.041 Sum_probs=155.7
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+. +....++.. .
T Consensus 125 l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~------------~ 185 (392)
T 2z9v_A 125 VADMLKAHPEITVVSVCHHDTPSGTINP---IDAIGALVSAHGAYLIVDAVSSF----GGMKTHPED------------C 185 (392)
T ss_dssp HHHHHHHCTTCCEEEEESEEGGGTEECC---HHHHHHHHHHTTCEEEEECTTTB----TTBSCCGGG------------G
T ss_pred HHHHHhcCCCCcEEEEeccCCCCceecc---HHHHHHHHHHcCCeEEEEccccc----CCccccccc------------c
Confidence 4556654567899999999999999999 88999999999999999999973 222122221 2
Q ss_pred CceEEEecCccccC-CCCceEEEEEecCHHHHHHHHhc----------------------cccCCCChHHHHHHHHHhCC
Q 044773 82 NRVHIVYSLSKDLG-LPGFRVGAIYSNDDTVVAAATKM----------------------SSFGLVSSQTQYLLSALLSD 138 (289)
Q Consensus 82 ~~~i~i~s~sK~~g-~~G~r~G~i~~~~~~~~~~~~~~----------------------~~~~~~~~~~q~~~~~~l~~ 138 (289)
+.++++.|+||.++ .+| +||++++++ +.+.+... ...+..+...+.++..+++.
T Consensus 186 ~~d~~~~s~sK~~~~~~g--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 262 (392)
T 2z9v_A 186 KADIYVTGPNKCLGAPPG--LTMMGVSER-AWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDL 262 (392)
T ss_dssp TCSEEEECSSSTTCCCSC--CEEEEECHH-HHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHH
T ss_pred cceEEEecCcccccCCCc--eeEEEECHH-HHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 45688999999764 345 599999654 44444321 11122344555555555543
Q ss_pred chHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCC----ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC
Q 044773 139 KKFAQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSN----AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP 213 (289)
Q Consensus 139 ~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p 213 (289)
. .++ +++.+++++++++++.+.|++.|+++..|. .+.++++.++...+ ..++...|.+++||.+.|
T Consensus 263 ~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~L~~~~gi~v~~ 333 (392)
T 2z9v_A 263 Y---LNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVD------EKALRQAARARYGVVFSS 333 (392)
T ss_dssp H---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTCC------HHHHHHHHHHHHCEECEE
T ss_pred H---HhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCCC------HHHHHHHHHhcCCEEEec
Confidence 2 344 677888999999999999988888776633 35677788763222 246788887666999999
Q ss_pred CCCCCCCCCCeEEEEE-e-cCCHHHHHHHHHHHHHHHHHHH
Q 044773 214 GSSCHCTEPGWFRVCF-A-NMSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 214 g~~f~~~~~~~~Ris~-~-~~~~e~l~~~l~~l~~~l~~~~ 252 (289)
|..+. .++++||++ + .++++++++++++|++++++..
T Consensus 334 g~~~~--~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 334 GRGET--LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp CCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCC--CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 87543 367999995 6 5799999999999999987654
No 93
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.90 E-value=1.3e-22 Score=181.91 Aligned_cols=216 Identities=13% Similarity=0.170 Sum_probs=158.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++..+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.. ....++. ..
T Consensus 119 l~~~i~~~-~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~----~~~~~~~------------~~ 178 (384)
T 3zrp_A 119 VEEEVRKS-EYKLVALTHVETSTGVREP---VKDVINKIRKYVELIVVDGVSSVG----AEEVKAE------------EW 178 (384)
T ss_dssp HHHHHHHS-CEEEEEEESEETTTTEECC---HHHHHHHHGGGEEEEEEECTTTTT----TSCCCTT------------TT
T ss_pred HHHHHHhC-CCcEEEEeCCCCCCceECc---HHHHHHHHHhcCCEEEEECccccc----Ccccccc------------cc
Confidence 45566654 6899999999999999999 899999999999999999999742 1111211 22
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHH------------HHh-----------cccc-CCCChHHHHHHHHHhC
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAA------------ATK-----------MSSF-GLVSSQTQYLLSALLS 137 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~------------~~~-----------~~~~-~~~~~~~q~~~~~~l~ 137 (289)
+.++++.|+||.++ ++.++||++++++.+... ... .... ++.+...+.++..++.
T Consensus 179 ~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~ 257 (384)
T 3zrp_A 179 NVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFR 257 (384)
T ss_dssp TCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHH
Confidence 56689999999986 345599999965543332 011 1111 2355566666666665
Q ss_pred CchHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCC----ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe
Q 044773 138 DKKFAQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSN----AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS 212 (289)
Q Consensus 138 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 212 (289)
.. ..+ +++.+++++++++++.+.|+++|+++..+. +++++|+.++. .+ ..++...|. ++||.+.
T Consensus 258 ~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~l~-~~gi~v~ 326 (384)
T 3zrp_A 258 LI---EKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-AD------PQKVLAGTV-NEGVEFA 326 (384)
T ss_dssp HH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-SC------HHHHHHHHH-TTTCCCE
T ss_pred HH---HhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-CC------HHHHHHHHH-HCCEEEe
Confidence 32 333 678889999999999999998888887776 46677888875 22 245777776 4599999
Q ss_pred CCCCCCCCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 213 PGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 213 pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
+|..+.. +++||+++. ++++++++++++|++++++..
T Consensus 327 ~g~~~~~---~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 327 PGVHPAF---KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp ECCCTTC---CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCc---CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 9875432 799999854 689999999999999998764
No 94
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.90 E-value=6.5e-23 Score=184.49 Aligned_cols=219 Identities=13% Similarity=0.096 Sum_probs=158.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++..+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.. +.. ... +..
T Consensus 140 l~~~i~~~-~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~g---~~~-~~~------------~~~ 199 (393)
T 3kgw_A 140 VEEGLAQH-KPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVASLG---GVP-IYM------------DQQ 199 (393)
T ss_dssp HHHHHHHH-CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTTT---TSC-CCT------------TTT
T ss_pred HHHHHhhC-CCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCcccc---Ccc-cch------------hhc
Confidence 45566553 6899999999999999999 889999999999999999999732 111 111 123
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc-------------------------cCCCChHHHHHHHHHh
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS-------------------------FGLVSSQTQYLLSALL 136 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~-------------------------~~~~~~~~q~~~~~~l 136 (289)
+.++++.|+||.++ ++.++||++++++ +.+.+..... .+..+...+.++..++
T Consensus 200 ~~d~~~~s~sK~~~-~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 277 (393)
T 3kgw_A 200 GIDIMYSSSQKVLN-APPGISLISFNDK-AKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESL 277 (393)
T ss_dssp TCCEEEEESSSTTC-CCSSCEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHH
T ss_pred CCCEEEecCccccc-CCCceeEEEECHH-HHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHH
Confidence 55688999999885 3345899999554 4444432110 1234556666666665
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCc----eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe
Q 044773 137 SDKKFAQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNA----GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS 212 (289)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 212 (289)
.... +..+++..++++++++++.+.|++.|+++..+.. +++.++.+++..+ ..++...|++++||.+.
T Consensus 278 ~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~gi~v~ 349 (393)
T 3kgw_A 278 ALIA--EQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYN------WRDIVSYVLDHFSIEIS 349 (393)
T ss_dssp HHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBC------HHHHHHHHHHHHCEECB
T ss_pred HHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCC------HHHHHHHHHHhCCEEEe
Confidence 5321 2336888899999999999999998888764433 5667787764332 24688888877799999
Q ss_pred CCCCCCCCCCCeEEEEE-ec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 213 PGSSCHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 213 pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
||..+ ..++++||++ +. .+++++++++++|++++++..
T Consensus 350 ~g~~~--~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 350 GGLGP--TEERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp CCCGG--GTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred CCccc--CCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 98754 3467999998 65 489999999999999987653
No 95
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.90 E-value=1.4e-22 Score=183.54 Aligned_cols=218 Identities=13% Similarity=0.086 Sum_probs=159.0
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++..+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.. ...... +..
T Consensus 130 l~~~i~~~-~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~----~~~~~~------------~~~ 189 (411)
T 3nnk_A 130 VEDAVKRI-RPRLLLTVQGDTSTTMLQP---LAELGEICRRYDALFYTDATASLG----GNPLET------------DVW 189 (411)
T ss_dssp HHHHHHHH-CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTBT----TBCCCT------------TTT
T ss_pred HHHHHhhC-CCeEEEEeCCCCCcceecc---HHHHHHHHHHcCCEEEEECCcccC----Ccccch------------hcc
Confidence 45555543 6899999999999999999 889999999999999999998742 211121 123
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc--------------------------------------ccCC
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS--------------------------------------SFGL 123 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--------------------------------------~~~~ 123 (289)
+.++++.|+||.++ ++.++||++++++ +.+.+.... ..++
T Consensus 190 ~~d~~~~s~~K~l~-~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (411)
T 3nnk_A 190 GLDAVSAGMQKCLG-GPSGTSPITLSAR-MEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHT 267 (411)
T ss_dssp TCSEEECCSTTTTC-CCSSEEEEEECHH-HHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSC
T ss_pred CCcEEEecCccccC-CCCceEEEEECHH-HHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCC
Confidence 56689999999865 4446899999654 444443221 1123
Q ss_pred CChHHHHHHHHHhCCchHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCCc---eEEEEEecCccccCCChhhHHHH
Q 044773 124 VSSQTQYLLSALLSDKKFAQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSNA---GLFCWVDMRHLLSSNTFEAEMEL 199 (289)
Q Consensus 124 ~~~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~~~~i~~~~~~~~~~~~~~~~~ 199 (289)
.+...+.++..+++.. .++ +++.+++++++++++.+.|++.|+++..+.+ +.++++.+++..+ ..++
T Consensus 268 ~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~l 338 (411)
T 3nnk_A 268 EATTALFGARECARLI---LQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQGIN------GDQA 338 (411)
T ss_dssp CCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTTCC------HHHH
T ss_pred CCHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCCCC------HHHH
Confidence 4556666666665532 344 7788899999999999999998888776654 5677788764322 2468
Q ss_pred HHHHHHhcCeEEeCCCCCCCCCCCeEEEEE-ec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 200 WKKIVYDVKLNISPGSSCHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 200 ~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
...|++++||.+.||. +....+++||++ +. ++++++++++++|++++++..
T Consensus 339 ~~~l~~~~gi~v~~g~--~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 339 RKLMLEDFGIEIGTSF--GPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp HHHHHHHHSEEEEECC--GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCeEEeCcc--CCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 8888877799999884 333467999998 64 489999999999999988654
No 96
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.90 E-value=4.8e-23 Score=184.82 Aligned_cols=212 Identities=16% Similarity=0.172 Sum_probs=150.8
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC--CEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKN--IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~--~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
+++++|++++|+||||.+++ +++|.++|+++| +++|+|++|+ ++.. ..++. ..+.++++
T Consensus 138 ~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~---~~~~-~~~~~------------~~~~di~~ 198 (384)
T 1eg5_A 138 EDTFLVSIMAANNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQT---IGKI-PFSLE------------KLEVDYAS 198 (384)
T ss_dssp TTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTT---TTTS-CCCCT------------TTCCSEEE
T ss_pred CCCeEEEEECCCCCcccccC---HHHHHHHHHhcCCceEEEEEhhhh---cCCc-ccCch------------hcCCCEEE
Confidence 46899999999999999999 899999999999 9999999997 2221 11221 12467889
Q ss_pred ecCccccCCCCceEEEEEecCHH-HHHHHHhc-----cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHH
Q 044773 88 YSLSKDLGLPGFRVGAIYSNDDT-VVAAATKM-----SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLV 161 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~i~~~~~~-~~~~~~~~-----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (289)
.|+||.+|.+| +||++++++. +...+... ...+..+.+.+.++..+++.. .+++++.+++++++++++.
T Consensus 199 ~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~ 273 (384)
T 1eg5_A 199 FSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA---VEELSEAAKHMEKLRSKLV 273 (384)
T ss_dssp EEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHH
T ss_pred ecHHHhcCCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHH
Confidence 99999999778 7999997653 12111110 123346778888888888752 4467888999999999999
Q ss_pred HHHHhcCCceecCC-c--eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-----------------C
Q 044773 162 SGLEKAGISCLKSN-A--GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-----------------E 221 (289)
Q Consensus 162 ~~l~~~g~~~~~~~-~--g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----------------~ 221 (289)
+.|++.|+++..+. + +.++++.++.. +..++...|. ++||.+.||..|+.. .
T Consensus 274 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~ 345 (384)
T 1eg5_A 274 SGLMNLGAHIITPLEISLPNTLSVSFPNI-------RGSTLQNLLS-GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIA 345 (384)
T ss_dssp HHHHTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHH-HTTEECBC------------CHHHHTTCCHHHH
T ss_pred HHhCCCCeEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHh-hCCeEEeccccccCCCCcchHHHHHcCCChhhc
Confidence 99988788776553 1 23455555521 1245776664 789999999877542 1
Q ss_pred CCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 222 PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 222 ~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
++++||+++. ++++++++++++|++++++...
T Consensus 346 ~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 346 QGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp HHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4789999974 6999999999999999887644
No 97
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.90 E-value=7.6e-24 Score=191.67 Aligned_cols=210 Identities=15% Similarity=0.162 Sum_probs=149.9
Q ss_pred HHHhhhCCCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
++++. +++++|++++|+||||. +++.+++++|+++|+++|+++|+||+|.++.+.+.. .++..+ .. ..
T Consensus 177 ~~~l~--~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~-~~-------~~ 245 (397)
T 2ord_A 177 RRKMS--EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKY-GV-------VP 245 (397)
T ss_dssp HHHCC--TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHH-TC-------CC
T ss_pred HHHhh--cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhh-CC-------CC
Confidence 44443 47899999999999999 999999999999999999999999999876554432 222222 10 11
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHh--ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
+ +.||||.++ +|+|+||++++++.+ .+.. ....+..+++.+.++.++++... + ++.++++++++++
T Consensus 246 d----~~s~sK~~~-~G~r~G~~~~~~~~~--~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~--~~~~~~~~~~~~~ 313 (397)
T 2ord_A 246 D----VLTTAKGLG-GGVPIGAVIVNERAN--VLEPGDHGTTFGGNPLACRAGVTVIKELT---K--EGFLEEVEEKGNY 313 (397)
T ss_dssp S----EEEECGGGG-TTSCCEEEEECSTTC--CCCTTSSCCSSTTCHHHHHHHHHHHHHHT---S--TTHHHHHHHHHHH
T ss_pred C----eeeeccccC-CCcCeEEEEEchHhc--ccCCCCcCCCCCCCHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHH
Confidence 2 238899999 899999999977643 3321 12223467888888887776422 1 3456777788888
Q ss_pred HHHHHHhc--CCce---ecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-cCC
Q 044773 160 LVSGLEKA--GISC---LKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NMS 233 (289)
Q Consensus 160 l~~~l~~~--g~~~---~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~~~ 233 (289)
+.+.|++. ++.. ..+. |.++|++++... +..++...|+ ++||.+.|+. ++++||+++ ..+
T Consensus 314 l~~~L~~~~~~~~~~~~~~~~-g~~~~~~~~~~~------~~~~l~~~l~-~~gi~v~~~~------~~~iRis~~~~~~ 379 (397)
T 2ord_A 314 LMKKLQEMKEEYDVVADVRGM-GLMIGIQFREEV------SNREVATKCF-ENKLLVVPAG------NNTIRFLPPLTVE 379 (397)
T ss_dssp HHHHHHHHHHHCTTEEEEEEE-TTEEEEEECTTS------CHHHHHHHHH-HTTEECEEET------TTEEEECCCTTCC
T ss_pred HHHHHHHHHHhCCceEEEEEE-eEEEEEEECChH------HHHHHHHHHH-HCCCEEccCC------CCEEEEECCcCCC
Confidence 88888765 3432 2333 456778876432 1245777777 4799999872 568999975 369
Q ss_pred HHHHHHHHHHHHHHHH
Q 044773 234 EDTLKLSMQRLKAFVD 249 (289)
Q Consensus 234 ~e~l~~~l~~l~~~l~ 249 (289)
++++++++++|+++++
T Consensus 380 ~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 380 YGEIDLAVETLKKVLQ 395 (397)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998875
No 98
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.90 E-value=2.1e-22 Score=178.40 Aligned_cols=213 Identities=12% Similarity=0.058 Sum_probs=152.7
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++..+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.. + ....++..+
T Consensus 116 l~~~l~~~-~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~D~a~~~---~-~~~~~~~~~------------ 175 (353)
T 2yrr_A 116 VARALKRR-RYRMVALVHGETSTGVLNP---AEAIGALAKEAGALFFLDAVTTL---G-MLPFSMRAM------------ 175 (353)
T ss_dssp HHHHHHHS-CCSEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTT---T-TSCCCHHHH------------
T ss_pred HHHHHHhC-CCCEEEEEccCCCcceecC---HHHHHHHHHHcCCeEEEEcCccc---c-ccccccccc------------
Confidence 45555543 6899999999999999999 88999999999999999999962 2 222233222
Q ss_pred CceEEEecCccccC-CCCceEEEEEecCHHHHHHHH-----------------hccccCCCChHHHHHHHHHhCCchHHH
Q 044773 82 NRVHIVYSLSKDLG-LPGFRVGAIYSNDDTVVAAAT-----------------KMSSFGLVSSQTQYLLSALLSDKKFAQ 143 (289)
Q Consensus 82 ~~~i~i~s~sK~~g-~~G~r~G~i~~~~~~~~~~~~-----------------~~~~~~~~~~~~q~~~~~~l~~~~~~~ 143 (289)
+.++++.|++|.++ .+| +||++++++.+ +.+. .....++.+...+.++..+++.. .
T Consensus 176 ~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~ 249 (353)
T 2yrr_A 176 GVDYAFTGSQKCLSAPPG--LAPIAASLEAR-KAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLV---L 249 (353)
T ss_dssp TCSEEECCTTSTTCCCSS--CEEEEECHHHH-HHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHH---H
T ss_pred CceEEEecCcccccCCCc--eEEEEECHHHH-HHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHH---H
Confidence 34588999999764 455 69999965544 3222 11112335566666666666532 3
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHhcCCceecCC--ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC
Q 044773 144 NY-ISENKKRLKQRHRKLVSGLEKAGISCLKSN--AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT 220 (289)
Q Consensus 144 ~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~ 220 (289)
++ +++.+++++++++++.+.|++.|+++..+. +++++|++++...+ ..++...|. ++||.+.||..|.
T Consensus 250 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~-~~gi~v~~g~~~~-- 320 (353)
T 2yrr_A 250 EEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVD------ADRLVRALY-AEGVAVAGGIGPT-- 320 (353)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCC------HHHHHHHHH-HTTEECEECCGGG--
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCCC------HHHHHHHHH-HCCEEEeCCcccc--
Confidence 33 678888999999999999988888877654 56677788763222 245777776 4599999998664
Q ss_pred CCCeEEEEE-ecCCHHHHH-HHHHHHHHHHH
Q 044773 221 EPGWFRVCF-ANMSEDTLK-LSMQRLKAFVD 249 (289)
Q Consensus 221 ~~~~~Ris~-~~~~~e~l~-~~l~~l~~~l~ 249 (289)
.++++|+++ +..++++++ +++++|+++++
T Consensus 321 ~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 321 RGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp TTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 357899999 446888888 99999998875
No 99
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.90 E-value=3.6e-23 Score=186.83 Aligned_cols=209 Identities=18% Similarity=0.195 Sum_probs=151.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHH-HHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNE-LNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~-l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++. +++++|++++|+||||.+++.++ +++|.++|+++|+++|+||+|+++.+.+... . .+..
T Consensus 175 l~~~l~--~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~-~~~~---------- 240 (392)
T 3ruy_A 175 LKAAIT--PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-A-CDWD---------- 240 (392)
T ss_dssp HHHHCC--TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-G-GGGG----------
T ss_pred HHHHhc--cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-h-hhcc----------
Confidence 344554 57999999999999999996555 9999999999999999999998776655432 1 1111
Q ss_pred CCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
+....+.||||.++ +| +|+||+++++ .+.+.+.... ..+..+++.+.++..+++.. .. ++.++++++++
T Consensus 241 -~~~~d~~~~SK~l~-gG~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~--~~~~~~~~~~~ 312 (392)
T 3ruy_A 241 -NVTPDMYILGKALG-GGVFPISCAAANR-DILGVFEPGSHGSTFGGNPLACAVSIAALEVL---EE--EKLTERSLQLG 312 (392)
T ss_dssp -TCCCSEEEECGGGG-TTTSCCEEEEECH-HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHH
T ss_pred -CCCCCEEEEchhhh-CChhhhEEEEECH-HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH---Hh--hhHHHHHHHHH
Confidence 11122347899987 67 9999999954 4444433322 22347788888888888743 22 56778899999
Q ss_pred HHHHHHHHhcC---CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CC
Q 044773 158 RKLVSGLEKAG---ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MS 233 (289)
Q Consensus 158 ~~l~~~l~~~g---~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~ 233 (289)
+++.+.|++++ +....+.++++ ++.++. +. .++...|. ++||.+.|+. ++++||+++. .+
T Consensus 313 ~~l~~~L~~~~~~~~~~~~~~g~~~-~~~~~~--~~------~~l~~~l~-~~gi~v~~~~------~~~iRi~~~~~~~ 376 (392)
T 3ruy_A 313 EKLVGQLKEIDNPMITEVRGKGLFI-GIELNE--PA------RPYCEQLK-AAGLLCKETH------ENVIRIAPPLVIS 376 (392)
T ss_dssp HHHHHHHTTCCCTTEEEEEEETTEE-EEEESS--CS------HHHHHHHH-TTTEECCCBT------TTEEEECCCTTCC
T ss_pred HHHHHHHHHhcCCCceEEEeeeeEE-EEEEcc--hH------HHHHHHHH-HCCcEEecCC------CCEEEEECCCCCC
Confidence 99999998874 33444555544 455654 22 45777776 7799999874 5799999753 68
Q ss_pred HHHHHHHHHHHHHHH
Q 044773 234 EDTLKLSMQRLKAFV 248 (289)
Q Consensus 234 ~e~l~~~l~~l~~~l 248 (289)
++++++++++|++++
T Consensus 377 ~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 377 EEDLEWAFQKIKAVL 391 (392)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 100
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.90 E-value=1.2e-22 Score=185.84 Aligned_cols=233 Identities=12% Similarity=0.068 Sum_probs=142.5
Q ss_pred hHHHhhhC-CCccEEEEeCC-CC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhcccccc
Q 044773 2 YQLAQKRH-LKVKGVLVTNP-SN-PLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p-~N-PtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (289)
+++++... ++..++++++| +| ++|. +++.+++++|.++|+++|+++|+||+|.++.+.+... . .+..+
T Consensus 179 le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~-~-~~~~~------ 250 (430)
T 3i4j_A 179 LRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPL-A-LSRWS------ 250 (430)
T ss_dssp HHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-G-GGGTT------
T ss_pred HHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-h-hhhhc------
Confidence 45555532 13344566666 66 8886 6788899999999999999999999999876655421 1 11210
Q ss_pred CCCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHh------ccccCCCChHHHHHHHHHhCCchHHHHHHHHHH
Q 044773 78 TEVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATK------MSSFGLVSSQTQYLLSALLSDKKFAQNYISENK 150 (289)
Q Consensus 78 ~d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 150 (289)
+....+.+|||+++ +| +|+||++++ +.+.+.+.. ....+..|++.+.++.++++.... ++..+..+
T Consensus 251 ----~~~~di~t~sK~l~-~G~~r~G~~~~~-~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~ 323 (430)
T 3i4j_A 251 ----GVTPDIAVLGKGLA-AGYAPLAGLLAA-PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER-EDLTGAAK 323 (430)
T ss_dssp ----TCCCSEEEECGGGT-TTSSCCEEEEEC-HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHH
T ss_pred ----CCCCcEEEEccccc-CCccccEEEEEC-HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc-ccHHHHHH
Confidence 11122447999998 69 999999995 555555543 223344788999988888874322 22234444
Q ss_pred HHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecCccccCCC---hhhHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeE
Q 044773 151 KRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNT---FEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWF 225 (289)
Q Consensus 151 ~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~---~~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~~ 225 (289)
+..+..++.+.+.+.++ ++....+.+ .++++++.+...... .....+++..++ ++||.+.|+..+. ..+.+++
T Consensus 324 ~~~~~~~~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~i 401 (430)
T 3i4j_A 324 ERGAQLLAGLQALQARFPQMMQVRGTG-LLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHL 401 (430)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEET-TEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEE
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEEE-EEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEE
Confidence 44444444455544444 344455555 466677653211100 011245777776 6799999984332 2346789
Q ss_pred EEEEec-CCHHHHHHHHHHHHHHHHHH
Q 044773 226 RVCFAN-MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 226 Ris~~~-~~~e~l~~~l~~l~~~l~~~ 251 (289)
||+++. .+++++++++++|++++++.
T Consensus 402 Ri~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 402 LLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999973 69999999999999998753
No 101
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.90 E-value=2e-22 Score=178.86 Aligned_cols=210 Identities=12% Similarity=0.028 Sum_probs=152.1
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEK--NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~--~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
+++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|+. +....++. ..+.++++
T Consensus 120 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~----~~~~~~~~------------~~~~d~~~ 180 (352)
T 1iug_A 120 EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTSL----LVGEVALE------------AMGVDAAA 180 (352)
T ss_dssp SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTTB----TTBCCCSG------------GGTCSEEE
T ss_pred cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCccc----cCcceecc------------ccCeeEEE
Confidence 47899999999999999999 88999999999 999999999973 22111211 12456889
Q ss_pred ecCccccCCCCceEEEEEecCHHHHH------------HHH---hccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHH
Q 044773 88 YSLSKDLGLPGFRVGAIYSNDDTVVA------------AAT---KMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~i~~~~~~~~~------------~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
.|+||.++ ++.++||++++++.+.. ... .....+..+...+.++..+++.. .+++++.+++
T Consensus 181 ~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~ 256 (352)
T 1iug_A 181 SGSQKGLM-CPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEV---LPRLEEHLAL 256 (352)
T ss_dssp EESSSTTC-CCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---GGGHHHHHHH
T ss_pred ecCccccc-CCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 99999664 22348999996554421 111 11222345667777776666542 2236788889
Q ss_pred HHHHHHHHHHHHHhcCCceecCC-ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec
Q 044773 153 LKQRHRKLVSGLEKAGISCLKSN-AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN 231 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~ 231 (289)
++++++++.+.|++.|+++..+. .+.++|++++...+ ..++...|. ++||.+.||..+ ..++++||+++.
T Consensus 257 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~-~~gi~v~~~~~~--~~~~~iRi~~~~ 327 (352)
T 1iug_A 257 KAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVP------YARVKEAFA-QRGAVIAGGQGP--LKGKVFRLSLMG 327 (352)
T ss_dssp HHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCC------HHHHHHHHH-TTTEECEECCGG--GTTTEEEECCCS
T ss_pred HHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCCC------HHHHHHHHH-HCCEEEEeCCCc--cCCCEEEEEccc
Confidence 99999999999998888887764 56678888764222 245777776 559999998732 346799999975
Q ss_pred -CCHHHHHHHHHHHHHHHHHH
Q 044773 232 -MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 232 -~~~e~l~~~l~~l~~~l~~~ 251 (289)
++++++++++++|++++++.
T Consensus 328 ~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 328 AYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHh
Confidence 57999999999999988754
No 102
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.89 E-value=3.8e-22 Score=181.09 Aligned_cols=218 Identities=11% Similarity=0.094 Sum_probs=157.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++.+. ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.. ....+.. ..
T Consensus 128 l~~~i~~~-~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~----~~~~~~~------------~~ 187 (416)
T 3isl_A 128 IIREIKKV-KPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIG----GCEVKVD------------EW 187 (416)
T ss_dssp HHHHHHHH-CCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTT----TSCCCTT------------TT
T ss_pred HHHHHhhC-CCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCcccc----CCCcchh------------hc
Confidence 45555533 6899999999999999999 889999999999999999999732 1111211 22
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc--------------------------------------c--cc
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM--------------------------------------S--SF 121 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--------------------------------------~--~~ 121 (289)
+.++++.|++|.++ ++.++|+++++++. .+.+... . ..
T Consensus 188 ~~d~~~~s~~K~l~-g~~g~g~~~~~~~~-~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 265 (416)
T 3isl_A 188 KIDAAIGGTQKCLS-VPSGMAPITYNERV-ADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNH 265 (416)
T ss_dssp TCSEEECCSSSTTC-CCSSEEEEEECHHH-HHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCS
T ss_pred CCCEEEecCccccC-CCCCeEEEEECHHH-HHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCC
Confidence 56689999999864 44568999996544 3333311 0 12
Q ss_pred CCCChHHHHHHHHHhCCchHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCCc---eEEEEEecCccccCCChhhHH
Q 044773 122 GLVSSQTQYLLSALLSDKKFAQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSNA---GLFCWVDMRHLLSSNTFEAEM 197 (289)
Q Consensus 122 ~~~~~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~~~~i~~~~~~~~~~~~~~~ 197 (289)
++.+...+.++..++... ..+ +++.+++++++++++.+.|++.|+++..+.+ +.++++.+++..+ ..
T Consensus 266 ~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~ 336 (416)
T 3isl_A 266 HTEATTMLYALREGVRLV---LEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIPGGID------GE 336 (416)
T ss_dssp SCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECCTTCC------HH
T ss_pred CCCCHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCCCCCC------HH
Confidence 234556666666666532 444 7888999999999999999998888877654 4577788764322 25
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEE-ecCCHHH-HHHHHHHHHHHHHHHH
Q 044773 198 ELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF-ANMSEDT-LKLSMQRLKAFVDSIT 252 (289)
Q Consensus 198 ~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~-~~~~~e~-l~~~l~~l~~~l~~~~ 252 (289)
++...|++++||.+.+|.. ...++++||++ +..++++ +++++++|++++++..
T Consensus 337 ~l~~~L~~~~gi~v~~g~~--~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 337 SVRDMLLAQFGIEIASSFG--PLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp HHHHHHHHHHCEECBCCCS--TTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCEEEecCCC--CCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 6888887777999999874 23467999999 4345555 9999999999998753
No 103
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.89 E-value=3.7e-22 Score=181.49 Aligned_cols=203 Identities=17% Similarity=0.179 Sum_probs=142.9
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITE-KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~-~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|..+.+. . ++ ++ +.++++.
T Consensus 146 ~~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~-~---~~-~~------------~~di~~~ 205 (404)
T 1e5e_A 146 PNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT-N---PV-DF------------GVDVVVH 205 (404)
T ss_dssp TTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC-C---GG-GG------------TCSEEEE
T ss_pred CCCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC-C---cc-cc------------CCEEEEE
Confidence 47899999999999999998 9999999999 99999999999976442 1 11 11 5679999
Q ss_pred cCccccCCCCceE-EEEEecCHHHHHHHHhcccc---CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRV-GAIYSNDDTVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGL 164 (289)
Q Consensus 89 s~sK~~g~~G~r~-G~i~~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 164 (289)
|+||+++++|+|+ ||++++++.+.+.+...... ...+++.+.++...++.. . ...+...++.+.+.+.+
T Consensus 206 S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~---~----~~~~~~~~~~~~l~~~l 278 (404)
T 1e5e_A 206 SATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTL---N----IRMKAESENAMKVAEYL 278 (404)
T ss_dssp ETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTH---H----HHHHHHHHHHHHHHHHH
T ss_pred cCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHH---H----HHHHHHHHHHHHHHHHH
Confidence 9999999999998 99999765555355544333 236778888888888763 2 22223344444455555
Q ss_pred Hhc---------------CCceecC----CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC------
Q 044773 165 EKA---------------GISCLKS----NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC------ 219 (289)
Q Consensus 165 ~~~---------------g~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------ 219 (289)
++. ++++.++ .++++.| +++.. .+.+..++++.|| +.+|..||.
T Consensus 279 ~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~~---------~~~~~~~l~~~~i-~~~~~s~G~~~sl~~ 347 (404)
T 1e5e_A 279 KSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKSG---------FEGAKKLLDNLKL-ITLAVSLGGCESLIQ 347 (404)
T ss_dssp HTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETTH---------HHHHHHHHHTCSS-SEESSCCCSSSCEEE
T ss_pred HhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCCC---------HHHHHHHHHhCCC-ceeccCCCCcceeee
Confidence 443 2222222 2777776 76531 1234556778899 556666652
Q ss_pred -----------------CC--CCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Q 044773 220 -----------------TE--PGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 220 -----------------~~--~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
.+ ++++|||++. +++++++++|+++++..-.
T Consensus 348 ~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~---e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 348 HPASMTHAVVPKEEREAAGITDGMIRLSVGI---EDADELIADFKQGLDALLR 397 (404)
T ss_dssp CGGGTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHHC
T ss_pred cccccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHHHHHH
Confidence 12 5899999995 8899999999998876543
No 104
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.89 E-value=3.9e-22 Score=179.76 Aligned_cols=218 Identities=16% Similarity=0.141 Sum_probs=156.6
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++... ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.. +....++. ..
T Consensus 136 l~~~i~~~-~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~~----~~~~~~~~------------~~ 195 (393)
T 2huf_A 136 IRDALLIH-KPSVLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVASL----GGAPMFMD------------RW 195 (393)
T ss_dssp HHHHHHHH-CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTB----TTBCCCTT------------TT
T ss_pred HHHHHhcc-CCcEEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEccccc----CCCCcchh------------hc
Confidence 34555532 5899999999999999999 89999999999999999999863 22111211 22
Q ss_pred CceEEEecCcccc-CCCCceEEEEEecCHHHHHHHHhc----cc---------------------cCCCChHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDL-GLPGFRVGAIYSNDDTVVAAATKM----SS---------------------FGLVSSQTQYLLSAL 135 (289)
Q Consensus 82 ~~~i~i~s~sK~~-g~~G~r~G~i~~~~~~~~~~~~~~----~~---------------------~~~~~~~~q~~~~~~ 135 (289)
+.++++.|+||.+ |.+|+ ||++++ +.+.+.+... .. .+..+...+.++..+
T Consensus 196 ~~d~~~~s~sK~l~g~~G~--G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 272 (393)
T 2huf_A 196 EIDAMYTGSQKVLGAPPGI--TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREA 272 (393)
T ss_dssp TCSEEECCSSSTTCCCSSC--EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHH
T ss_pred CccEEEECCCcccccCCCe--EEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHH
Confidence 5678899999985 55676 999996 4555554432 11 122445566666656
Q ss_pred hCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCceecCC---ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEE
Q 044773 136 LSDKKFAQN-YISENKKRLKQRHRKLVSGLEKAGISCLKSN---AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNI 211 (289)
Q Consensus 136 l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 211 (289)
++.. .+ .+++.+++++++++++.+.|++.|+++..+. +++++++.++...+ ..++...|++++||.+
T Consensus 273 l~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~L~~~~gi~v 343 (393)
T 2huf_A 273 IAMA---CEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGVD------WLKAAQYAMKTYLVEI 343 (393)
T ss_dssp HHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTCC------HHHHHHHHHHHHCEEC
T ss_pred HHHH---HHhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCCC------HHHHHHHHHHhCCEEE
Confidence 6532 22 3677888899999999999998888877663 34577787753222 2467888876779999
Q ss_pred eCCCCCCCCCCCeEEEEE-ec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 212 SPGSSCHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 212 ~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
.||..|. .++++||++ +. ++++++++++++|++++++...
T Consensus 344 ~~g~~~~--~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 344 SGGLGPT--AGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp BCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred ecCcccc--cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 9988653 367999999 64 4788999999999999876543
No 105
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.89 E-value=1.2e-22 Score=185.16 Aligned_cols=223 Identities=14% Similarity=0.144 Sum_probs=146.3
Q ss_pred hHHHhhhC---CCccEEEEe-CCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccc
Q 044773 2 YQLAQKRH---LKVKGVLVT-NPSNPLG-TTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCE 76 (289)
Q Consensus 2 l~~~~~~~---~~~~~i~l~-~p~NPtG-~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~ 76 (289)
++++++.. +++++|+++ +|+| || .+++.+++++|.++|+++|+++|+||+|+++.+.+... .+ +.
T Consensus 187 l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~-~~------- 256 (426)
T 1sff_A 187 IHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AM-EQ------- 256 (426)
T ss_dssp HHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GG-GG-------
T ss_pred HHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hh-hh-------
Confidence 34555431 356676553 4477 99 88999999999999999999999999999865544321 11 11
Q ss_pred cCCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh--ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 044773 77 NTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 77 ~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
.+.++.+.||||++| +|+|+||+++++ .+.+.+.. .......|++.+.++.++++... + ....++++
T Consensus 257 ----~~~~~di~s~sK~~~-~GlriG~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~---~--~~~~~~~~ 325 (426)
T 1sff_A 257 ----MGVAPDLTTFAKSIA-GGFPLAGVTGRA-EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFE---Q--ENLLQKAN 325 (426)
T ss_dssp ----TTSCCSEEEECGGGG-TSSCCEEEEEEH-HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHH---H--TTHHHHHH
T ss_pred ----cCCCCCEEEEccccc-CCCceEEEEEcH-HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHH---h--cCHHHHHH
Confidence 122233559999999 499999999965 44443332 12223467888888887665321 1 12334455
Q ss_pred HHHHHHHHHHHhc----C-CceecCCceEEEEEecCccccC--CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 044773 155 QRHRKLVSGLEKA----G-ISCLKSNAGLFCWVDMRHLLSS--NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 227 (289)
Q Consensus 155 ~~~~~l~~~l~~~----g-~~~~~~~~g~~~~i~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ri 227 (289)
++++++.+.|+++ . +....+. |+++|+++...... ....+..+++..|+ ++||.+.||..+ ++++||
T Consensus 326 ~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~----~~~iRi 399 (426)
T 1sff_A 326 DLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY----YNVLRI 399 (426)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT----SCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC----CCEEEE
Confidence 5555555555543 2 2223344 57888988532100 01123456777776 569999998764 468999
Q ss_pred EEe-cCCHHHHHHHHHHHHHHHHHH
Q 044773 228 CFA-NMSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 228 s~~-~~~~e~l~~~l~~l~~~l~~~ 251 (289)
+++ .++++++++++++|++++++.
T Consensus 400 ~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 400 LVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ECCccCCHHHHHHHHHHHHHHHHHH
Confidence 996 479999999999999988754
No 106
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.89 E-value=3.2e-22 Score=180.48 Aligned_cols=219 Identities=14% Similarity=0.118 Sum_probs=157.0
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++..+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.. + ....++. ..
T Consensus 135 l~~~l~~~-~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~Dea~~~---g-~~~~~~~------------~~ 194 (396)
T 2ch1_A 135 LARAIELH-QPKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVASL---C-GVPFYMD------------KW 194 (396)
T ss_dssp HHHHHHHH-CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTB---T-TBCCCTT------------TT
T ss_pred HHHHHHhC-CCCEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEEccccc---c-CCccchh------------hc
Confidence 34555542 5899999999999999999 89999999999999999999982 2 2212221 22
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc-------------------------cccCCCChHHHHHHHHHh
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM-------------------------SSFGLVSSQTQYLLSALL 136 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~-------------------------~~~~~~~~~~q~~~~~~l 136 (289)
+.++++.|++|.++ ++.++|++++++ .+.+.+... ...++.+...+.++..++
T Consensus 195 ~~d~~~~s~~K~~~-~~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 272 (396)
T 2ch1_A 195 EIDAVYTGAQKVLG-APPGITPISISP-KALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREAL 272 (396)
T ss_dssp TCCEEECCCC-CCC-CCSSCEEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHH
T ss_pred CcCEEEEcCCcccc-CCCCeEEEEECH-HHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHH
Confidence 34577789999876 334569999965 444443211 011235667777777777
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce----EEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe
Q 044773 137 SDKKFAQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG----LFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS 212 (289)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g----~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 212 (289)
+... +..+++.+++++++++++.+.|+++|+++..+.++ .++++.++...+ ..++...|++++||.+.
T Consensus 273 ~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~L~~~~gi~v~ 344 (396)
T 2ch1_A 273 AQIA--EEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVD------WWKVSQYAMNNFSLEVQ 344 (396)
T ss_dssp HHHH--HHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCC------HHHHHHHHHHHHCBCCB
T ss_pred HHHH--HhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCCC------HHHHHHHHHHhCCEEEe
Confidence 6421 34577888999999999999999888888777653 367777753222 24688888766799999
Q ss_pred CCCCCCCCCCCeEEEEE-ec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 213 PGSSCHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 213 pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
+|..+. .++++||++ +. .+++++++++++|++++++..
T Consensus 345 ~g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 345 GGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp CCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred cCcccc--CCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 987542 367999999 53 589999999999999988654
No 107
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.89 E-value=1e-21 Score=177.36 Aligned_cols=214 Identities=14% Similarity=0.179 Sum_probs=152.7
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++. +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.. ....++..+
T Consensus 157 l~~~l~--~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g----~~~~~~~~~------------ 215 (406)
T 1kmj_A 157 LPTLFD--EKTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVM----HHPVDVQAL------------ 215 (406)
T ss_dssp HHHHCC--TTEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTT----TSCCCHHHH------------
T ss_pred HHHHhc--cCCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcC----CCCCccccc------------
Confidence 344443 46899999999999999999 999999999999999999999852 212222222
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc----------------------c-CCCChHHHHHHH-HHhC
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS----------------------F-GLVSSQTQYLLS-ALLS 137 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~----------------------~-~~~~~~~q~~~~-~~l~ 137 (289)
+.++++.|+||.+|.+| +||++++ +.+.+.+..... + ...+++.+.++. .+++
T Consensus 216 ~~d~~~~s~~K~~g~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 292 (406)
T 1kmj_A 216 DCDFYVFSGHKLYGPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALE 292 (406)
T ss_dssp TCSEEEEEGGGTTSCTT--CEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEEchhccCCCC--cEEEEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHH
Confidence 56788999999998778 8999995 455544432210 1 113445555433 4444
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC--CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCC
Q 044773 138 DKKFAQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS--NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPG 214 (289)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg 214 (289)
... ...+++.+++++++++++.+.|++. |+++..+ .++++.| .++. . +..++...| .++||.+.||
T Consensus 293 ~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~~~-~------~~~~~~~~l-~~~gi~v~~g 361 (406)
T 1kmj_A 293 YVS--ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF-NLGK-H------HAYDVGSFL-DNYGIAVRTG 361 (406)
T ss_dssp HHH--HHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEE-EETT-C------CHHHHHHHH-HHTTEECEEE
T ss_pred HHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEE-EECC-C------CHHHHHHHH-hhCCcEEEec
Confidence 221 2246778888999999999999988 8888877 7777665 5542 1 123466555 5779999998
Q ss_pred CCCCC------CCCCeEEEEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 215 SSCHC------TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 215 ~~f~~------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
..|.. ..++++||+++. +++++++.++++|+++++.
T Consensus 362 ~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 362 HHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp CTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 86532 125799999975 5999999999999998765
No 108
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.89 E-value=1.7e-22 Score=181.22 Aligned_cols=200 Identities=17% Similarity=0.185 Sum_probs=144.5
Q ss_pred CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTT-MSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|++++|+||||.+ .+.+++++|.++|+++|+++|+||+|.++...+.. .++..+ . .... +.
T Consensus 171 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~-~--------~~~d---~~ 237 (375)
T 2eh6_A 171 EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHF-N--------LKPD---VI 237 (375)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGG-T--------CCCS---EE
T ss_pred CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhc-C--------CCCC---EE
Confidence 478999999889999999 56889999999999999999999999976443322 122222 1 1111 22
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHh--ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEK 166 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 166 (289)
||||.++ +|+|+||+++++ .+.+.+.. .......+++.+.++.++++.. . +..++++++++++.+.|++
T Consensus 238 s~SK~~~-~g~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~----~~~~~~~~~~~~l~~~L~~ 308 (375)
T 2eh6_A 238 ALAKGLG-GGVPIGAILARE-EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV---E----KLLPHVREVGNYFKEKLKE 308 (375)
T ss_dssp EECGGGG-TTSCCEEEEEEH-HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHH
T ss_pred EEccccc-CCCCeEEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHH
Confidence 8889999 799999999965 44443333 1222336777777776666532 2 6677888888999999988
Q ss_pred cCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-cCCHHHHHHHHHHHH
Q 044773 167 AGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NMSEDTLKLSMQRLK 245 (289)
Q Consensus 167 ~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~~~~e~l~~~l~~l~ 245 (289)
++....++ .|+++|++++.. . .+++..|. ++||.+.|+. ++++||+++ ..+++++++++++|+
T Consensus 309 ~~~~~~~~-~g~~~~~~~~~~--~------~~~~~~l~-~~gi~~~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~ 372 (375)
T 2eh6_A 309 LGKGKVKG-RGLMLGLELERE--C------KDYVLKAL-EKGLLINCTA------GKVLRFLPPLIIQKEHIDRAISVLR 372 (375)
T ss_dssp TTSSEEEE-ETTEEEEECSSC--C------HHHHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HhcCCceE-EEEEEEEEEcCc--H------HHHHHHHH-HCCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 76544433 456788888641 2 35777776 5799999862 578999986 379999999999998
Q ss_pred HH
Q 044773 246 AF 247 (289)
Q Consensus 246 ~~ 247 (289)
++
T Consensus 373 ~~ 374 (375)
T 2eh6_A 373 EI 374 (375)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 109
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.88 E-value=3.4e-22 Score=184.14 Aligned_cols=225 Identities=11% Similarity=0.071 Sum_probs=145.6
Q ss_pred hHHHhh-hC-CCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhcccccc
Q 044773 2 YQLAQK-RH-LKVKGVLVTNP-SNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~-~~-~~~~~i~l~~p-~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (289)
+++++. .+ +++++|+++++ +| ||.++ +++++++|.++|++||+++|+||+|.++++.|..+ . .+.
T Consensus 204 le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~-~~~-------- 272 (452)
T 3n5m_A 204 VDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-G-FMN-------- 272 (452)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-G-GGG--------
T ss_pred HHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-h-hhh--------
Confidence 345554 22 35667677766 89 99665 88899999999999999999999999876655432 1 111
Q ss_pred CCCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHh--------ccccCCCChHHHHHHHHHhCCchHHHHHHHH
Q 044773 78 TEVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATK--------MSSFGLVSSQTQYLLSALLSDKKFAQNYISE 148 (289)
Q Consensus 78 ~d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 148 (289)
.+....+.+|||+++ .| +|+||++++ +.+.+.+.. ....+..|++.+.++.++++.... +.
T Consensus 273 ---~~~~~di~t~sK~l~-~G~~~ig~~~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-----~~ 342 (452)
T 3n5m_A 273 ---YDVKPDIITMAKGIT-SAYLPLSATAVK-REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN-----EN 342 (452)
T ss_dssp ---TTCCCSEEEECGGGG-TTSSCCEEEEEE-HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH-----TT
T ss_pred ---cCCCCCEEeeccccc-CCCcceEEEEEC-HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh-----cc
Confidence 122233557999998 59 999999995 455554422 112334788888888887764321 12
Q ss_pred HHHHHHHHHHHHHHHHH----hcC-CceecCCceEEEEEecCccccCC-C--hhhHHHHHHHHHHhcCeEEeCCCCCCCC
Q 044773 149 NKKRLKQRHRKLVSGLE----KAG-ISCLKSNAGLFCWVDMRHLLSSN-T--FEAEMELWKKIVYDVKLNISPGSSCHCT 220 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~----~~g-~~~~~~~~g~~~~i~~~~~~~~~-~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~ 220 (289)
..++++++.+++++.|. +++ +....+.+ .++++.+....... . .....+++..++ +.||.+.|+..|...
T Consensus 343 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~ 420 (452)
T 3n5m_A 343 LIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKG-LLVGIELVNDKETKEPIDNDKIASVVNACK-EKGLIIGRNGMTTAG 420 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESS-SCEEEEEEEETTTTEECCHHHHHHHHHHHH-HTTEECEECTTSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCCcccCCCCHHHHHHHHHHHH-HCCcEEeecCcccCC
Confidence 23334444444444444 332 33344444 45556664321110 0 011235666666 669999999887665
Q ss_pred CCCeEEEEEec-CCHHHHHHHHHHHHHHHH
Q 044773 221 EPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 221 ~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 249 (289)
.++++||+++. .+++++++++++|+++++
T Consensus 421 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 421 YNNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp CCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 67899998754 699999999999998875
No 110
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.88 E-value=3.9e-22 Score=182.49 Aligned_cols=224 Identities=16% Similarity=0.163 Sum_probs=146.7
Q ss_pred hHHHhhhC--CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhcccccc
Q 044773 2 YQLAQKRH--LKVKGVLVTNP-SNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~~~--~~~~~i~l~~p-~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (289)
+++++++. +++++ ++++| +||||. +++++++++|.++|+++|+++|+||+|+++.+.+.. .. .+...
T Consensus 192 le~~l~~~~~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~-~~~~~------ 262 (433)
T 1zod_A 192 AFDLIDRQSSGNLAA-FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FA-CQRDG------ 262 (433)
T ss_dssp HHHHHHHHCCSCEEE-EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-ST-HHHHT------
T ss_pred HHHHHHhcCCCCeEE-EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hH-HhhcC------
Confidence 34555432 34555 55677 689995 678999999999999999999999999987554432 11 12211
Q ss_pred CCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc--c--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHH
Q 044773 78 TEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM--S--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRL 153 (289)
Q Consensus 78 ~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 153 (289)
....+.||||++| +|+|+||+++++ .+.+.+... . ..+..|++.+.++.++++... + ....+++
T Consensus 263 -----~~~di~s~sK~~~-~G~~ig~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~---~--~~~~~~~ 330 (433)
T 1zod_A 263 -----VTPDILTLSKTLG-AGLPLAAIVTSA-AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQ---R--DGLVARA 330 (433)
T ss_dssp -----CCCSEEEECHHHH-TTSSCEEEEECH-HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHH---H--TTHHHHH
T ss_pred -----CCCCEEEeccccc-CCCCeeEEEEhH-HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHH---h--CCHHHHH
Confidence 1122458999999 599999999965 555544432 1 233468888888777775321 1 1233445
Q ss_pred HHHHHHHHHHHHhc----C-CceecCCceEEEEEecCccccC--CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEE
Q 044773 154 KQRHRKLVSGLEKA----G-ISCLKSNAGLFCWVDMRHLLSS--NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 226 (289)
Q Consensus 154 ~~~~~~l~~~l~~~----g-~~~~~~~~g~~~~i~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~R 226 (289)
+++++++.+.|+++ + +....+. |.++|++++..... .......++...++ ++||.+.||..|+ .++++|
T Consensus 331 ~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~--~~~~lR 406 (433)
T 1zod_A 331 NVMGDRLRRGLLDLMERFDCIGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPG--MGGVFR 406 (433)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTT--SCCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCC--CCCEEE
Confidence 55555666655543 2 2233344 45667887642100 00022356777777 6799999998775 357999
Q ss_pred EEEe-cCCHHHHHHHHHHHHHHHHH
Q 044773 227 VCFA-NMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 227 is~~-~~~~e~l~~~l~~l~~~l~~ 250 (289)
|+++ ..+++++++++++|++++++
T Consensus 407 i~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 407 IAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCcCCCHHHHHHHHHHHHHHHHH
Confidence 9875 36999999999999998765
No 111
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.88 E-value=7.8e-22 Score=177.38 Aligned_cols=219 Identities=13% Similarity=0.063 Sum_probs=150.7
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCC-ccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPG-FVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ 80 (289)
+++++... ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+++.++... ...+..+....+ .+.
T Consensus 163 l~~~i~~~-~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~---~~~ 235 (397)
T 3f9t_A 163 VKDAVEDY-DVDGIIGIAGTTELGTIDN---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFD---FSL 235 (397)
T ss_dssp HHHHHHHS-CCCEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCS---GGG
T ss_pred HHHHHhhc-CCeEEEEECCCCCCCCCCC---HHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccccc---ccc
Confidence 45566653 6899999999999999988 899999999999999999999865432111 000000000000 012
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccC----------CC---ChHHHHHHHHHhCCchHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFG----------LV---SSQTQYLLSALLSDKKFAQNYIS 147 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~----------~~---~~~~q~~~~~~l~~~~~~~~~~~ 147 (289)
+.++++.|++|.++ +|.|+|+++++++.+.+.+.....+. .. +.+.+.++..++. ....+
T Consensus 236 -~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~ 308 (397)
T 3f9t_A 236 -GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG-----REGQR 308 (397)
T ss_dssp -TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH-----HHHHH
T ss_pred -cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh-----HHHHH
Confidence 55688999999886 77899999998776654443222221 11 2244444444442 34467
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 044773 148 ENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 227 (289)
Q Consensus 148 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ri 227 (289)
+..++++++++++.+.|++.|+++..+..+.++++.++. ..++...|. ++||.+.++.. ++++||
T Consensus 309 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l~-~~gi~v~~~~~-----~~~~Ri 373 (397)
T 3f9t_A 309 KIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED---------YKEVCKKLR-DRGIYVSVCNC-----VKALRI 373 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT---------HHHHHHHHH-HTTCBCEECSS-----SSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC---------HHHHHHHHH-hCCeEEeccCC-----CCEEEE
Confidence 777888899999999999888875555555566677653 135777776 55999998764 479999
Q ss_pred EEec-CCHHHHHHHHHHHHHHHH
Q 044773 228 CFAN-MSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 228 s~~~-~~~e~l~~~l~~l~~~l~ 249 (289)
+++. ++++++++++++|+++++
T Consensus 374 ~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 374 VVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEcCCCCHHHHHHHHHHHHHhhC
Confidence 9974 699999999999998764
No 112
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.88 E-value=5.8e-22 Score=179.53 Aligned_cols=211 Identities=18% Similarity=0.164 Sum_probs=148.6
Q ss_pred CCccEEEEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 10 LKVKGVLVTNPSNPLGTTM--SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~--~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
+++++|+++ |+||||.++ +.+++++|+++|+++|+++|+||+|+++.+.+... .. +... .... +
T Consensus 182 ~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~-~~~~--------~~~d---~ 247 (406)
T 4adb_A 182 DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AY-MHYG--------VTPD---L 247 (406)
T ss_dssp TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HH-HHHT--------CCCS---E
T ss_pred CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HH-HhcC--------CCCC---E
Confidence 578888887 999999998 99999999999999999999999999776655432 11 1211 1122 2
Q ss_pred ecCccccCCCCceEEEEEecCHHHHHHHHhcc--ccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 88 YSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 165 (289)
.||||.++ +|+|+||++++ +.+.+.+.... ..+..+++.+.++..+++.... ++..++++++++++.+.|+
T Consensus 248 ~t~sK~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~ 320 (406)
T 4adb_A 248 LTTAKALG-GGFPVGALLAT-EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT-----PEMLNGVKQRHDWFVERLN 320 (406)
T ss_dssp EEECGGGG-TTSCCEEEEEC-HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-----HHHHHHHHHHHHHHHHHHH
T ss_pred EEechhhc-CCCCeEEEEEc-HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHH
Confidence 27899999 99999999995 44544443322 2234778888888877764221 4556667777777777776
Q ss_pred hcC----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHH
Q 044773 166 KAG----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLS 240 (289)
Q Consensus 166 ~~g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~ 240 (289)
+.+ .....+..|.++++.++.... .+..+++..|+ ++||.+.|+. ++++||+++. .++++++++
T Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~-~~gi~v~~~~------~~~iRi~~~~~~~~e~i~~~ 389 (406)
T 4adb_A 321 TINHRYGLFSEVRGLGLLIGCVLNADYA----GQAKQISQEAA-KAGVMVLIAG------GNVVRFAPALNVSEEEVTTG 389 (406)
T ss_dssp HHHHHHCCEEEEEEETTEEEEEECTTTT----TCHHHHHHHHH-HTTEECEESS------TTEEEECCCTTCCHHHHHHH
T ss_pred HHHHhCCCceEEEEEEEEEEEEEeCCcH----HHHHHHHHHHH-HCCcEEeecC------CCeEEEECCCCCCHHHHHHH
Confidence 642 111122235677888775321 12346777777 4599999853 5799997643 699999999
Q ss_pred HHHHHHHHHHHH
Q 044773 241 MQRLKAFVDSIT 252 (289)
Q Consensus 241 l~~l~~~l~~~~ 252 (289)
+++|++++++..
T Consensus 390 ~~~l~~~l~~~~ 401 (406)
T 4adb_A 390 LDRFAAACEHFV 401 (406)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 113
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.88 E-value=5.6e-22 Score=183.18 Aligned_cols=219 Identities=7% Similarity=0.004 Sum_probs=145.2
Q ss_pred CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 11 KVKGVLVTNPSNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
++++|+++.++|++|. +++.+++++|.++|++||+++|+||+|.+++..|..+ . .+.. +....+.+
T Consensus 221 ~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~-~~~~-----------~~~pdi~t 287 (460)
T 3gju_A 221 TIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-G-SDHY-----------GIKPDLIT 287 (460)
T ss_dssp GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-H-HHHH-----------TCCCSEEE
T ss_pred CEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-h-Hhhc-----------CCCCCeee
Confidence 4556555544777776 7788999999999999999999999999876655432 1 1221 11222457
Q ss_pred CccccCCCC-ceEEEEEecCHHHHHHHHh---------ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPG-FRVGAIYSNDDTVVAAATK---------MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 90 ~sK~~g~~G-~r~G~i~~~~~~~~~~~~~---------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
|||+++ +| +|+||+++++ .+.+.+.. ....+..|++.+.++.++|+.... ++..+..++..+..++.
T Consensus 288 ~sK~l~-gG~~~lg~v~~~~-~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~ 364 (460)
T 3gju_A 288 IAKGLT-SAYAPLSGVIVAD-RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE-MDLVTNAGETGAYFRAE 364 (460)
T ss_dssp ECGGGT-TTSSCCEEEEEEH-HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHH
T ss_pred eehhhc-CCCCCeEEEEECH-HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHH
Confidence 999998 66 8999999964 44554431 122344788999988888874322 33355555556666666
Q ss_pred HHHHHHhcC-CceecCCceEEEEEecCccccC-CC----hhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-cC
Q 044773 160 LVSGLEKAG-ISCLKSNAGLFCWVDMRHLLSS-NT----FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NM 232 (289)
Q Consensus 160 l~~~l~~~g-~~~~~~~~g~~~~i~~~~~~~~-~~----~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~~ 232 (289)
+.+.+.+++ +....+.| .++++.+...... .. .....+++..++ ++||.+.|+. ..+++||+++ ..
T Consensus 365 l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~~~~ 437 (460)
T 3gju_A 365 LAKAVGGHKNVGEVRGDG-MLAAVEFVADKDDRVFFDASQKIGPQVATALA-ASGVIGRAMP-----QGDILGFAPPLCL 437 (460)
T ss_dssp HHHHHTTSTTEEEEEEET-TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEECS-----SSCEEEECCCTTC
T ss_pred HHHHHhcCCCeEEEeeee-EEEEEEEccCccccccccchHHHHHHHHHHHH-HCCeEEecCC-----CCCEEEEECCCCC
Confidence 666666653 33344444 4666766543211 00 011235667666 5699999875 2479999975 36
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 044773 233 SEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 233 ~~e~l~~~l~~l~~~l~~~~ 252 (289)
+++++++++++|++++++..
T Consensus 438 t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 438 TREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 114
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.88 E-value=3e-21 Score=174.80 Aligned_cols=219 Identities=14% Similarity=0.091 Sum_probs=153.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCC-CccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSG-TVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++... ++++|++++|+|| ...+ +++|.++|+++|+++|+|++|+. +.+.+..... . .
T Consensus 155 l~~~l~~~-~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~----~---------~ 215 (407)
T 2dkj_A 155 VRRLALEH-RPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNP----L---------P 215 (407)
T ss_dssp HHHHHHHH-CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCC----T---------T
T ss_pred HHHHHhhc-CCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCc----c---------c
Confidence 44555532 6899999999998 5566 89999999999999999999986 3333322111 1 1
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc-cc--CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS-SF--GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~-~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
..++++.|+||.+ +|.|.||++++++.+.+.+.... .+ +..+.....++..+++... ..++++.++++++++
T Consensus 216 -~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~ 290 (407)
T 2dkj_A 216 -YAHVVTSTTHKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEAL--QPEFKEYSRLVVENA 290 (407)
T ss_dssp -TCSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHH
T ss_pred -cccEEEEeccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHH
Confidence 2468899999966 57788999997455555554432 22 2233333334555554321 345788889999999
Q ss_pred HHHHHHHHhcCCceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCC----CCCCCCeEEEEEec-
Q 044773 158 RKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSC----HCTEPGWFRVCFAN- 231 (289)
Q Consensus 158 ~~l~~~l~~~g~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f----~~~~~~~~Ris~~~- 231 (289)
+++.+.|++.|+++.. +..++++|++++... .+..++...| .++||.+.+|..+ +...++++|++++.
T Consensus 291 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~ 364 (407)
T 2dkj_A 291 KRLAEELARRGYRIVTGGTDNHLFLVDLRPKG-----LTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAI 364 (407)
T ss_dssp HHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT-----CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHH
T ss_pred HHHHHHHHhCCceeecCCCCceEEEEECcccC-----CCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccc
Confidence 9999999988888765 356778889887421 1123566666 5789999998764 22335789999953
Q ss_pred ----CCHHHHHHHHHHHHHHHHH
Q 044773 232 ----MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 232 ----~~~e~l~~~l~~l~~~l~~ 250 (289)
.+++++++++++|++++++
T Consensus 365 ~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 365 TTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp HHTTCCGGGHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHhc
Confidence 5899999999999999876
No 115
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.88 E-value=5.5e-22 Score=178.39 Aligned_cols=202 Identities=17% Similarity=0.209 Sum_probs=145.2
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHH----HcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceE
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFIT----EKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVH 85 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~----~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i 85 (289)
+++++|++++|+||||.+++ +++|.++|+ ++|+++|+|++|+. +....++ +..+.++
T Consensus 153 ~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~----g~~~~~~------------~~~~~d~ 213 (390)
T 1elu_A 153 PKTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSA----GSLPLDF------------SRLEVDY 213 (390)
T ss_dssp TTEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTB----TTBCCCT------------TTSCCSE
T ss_pred CCceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEccccc----CCcCCCh------------hhcCCCE
Confidence 47899999999999999999 899999999 99999999999983 2211121 1235668
Q ss_pred EEecCccccCCCCceEEEEEecCHHHHHHHHhc------------------------cccCCCChHHHHHHHHHhCCchH
Q 044773 86 IVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM------------------------SSFGLVSSQTQYLLSALLSDKKF 141 (289)
Q Consensus 86 ~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~------------------------~~~~~~~~~~q~~~~~~l~~~~~ 141 (289)
++.|+||.++ +|.++||++++++.+ +.+... ...++.+.+.+.++..+++....
T Consensus 214 ~~~s~~K~~~-~~~g~G~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~ 291 (390)
T 1elu_A 214 YAFTGHKWFA-GPAGVGGLYIHGDCL-GEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQR 291 (390)
T ss_dssp EEEESSSTTC-CCTTCEEEEECTTTG-GGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH
T ss_pred EEcccccccc-CCCceEEEEECHHhH-hhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHH
Confidence 8999999553 556699999975443 222210 11233555777766666653221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec---CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCC
Q 044773 142 AQNYISENKKRLKQRHRKLVSGLEKA-GISCLK---SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSC 217 (289)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~---~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f 217 (289)
..++++.+++++++++++.+.|+++ |+++.. +.++++.| +++...+ ..++...|. ++||.+.||.
T Consensus 292 -~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~l~-~~gi~v~~~~-- 360 (390)
T 1elu_A 292 -QGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSF-TVDSPLG------HRAIVQKLE-EQRIYLRTIA-- 360 (390)
T ss_dssp -HCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEE-EECSSSC------HHHHHHHHH-HTTEECEEET--
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEE-EcCCCCC------HHHHHHHHH-HCCEEEEecC--
Confidence 2237788899999999999999987 887774 45676654 7753221 245777775 6799999886
Q ss_pred CCCCCCeEEEEEe-cCCHHHHHHHHHHHHH
Q 044773 218 HCTEPGWFRVCFA-NMSEDTLKLSMQRLKA 246 (289)
Q Consensus 218 ~~~~~~~~Ris~~-~~~~e~l~~~l~~l~~ 246 (289)
.++++||+++ ..+++++++++++|++
T Consensus 361 ---~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 361 ---DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp ---TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred ---CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 3579999994 3699999999999865
No 116
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.88 E-value=7.1e-22 Score=178.60 Aligned_cols=212 Identities=17% Similarity=0.111 Sum_probs=140.8
Q ss_pred CCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTT-MSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|+++.++|++|.+ ++++++++|.++|+++|+++|+||+|.+++..+... .. +. .+....+.
T Consensus 178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~-~~-----------~~~~~d~~ 244 (395)
T 3nx3_A 178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AY-EH-----------AQILPDIM 244 (395)
T ss_dssp TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GG-GG-----------GTCCCSEE
T ss_pred CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hH-Hh-----------cCCCCCEE
Confidence 467787777666666665 788999999999999999999999999875544321 11 11 12223356
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhc--cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEK 166 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 166 (289)
||||.++ +|+|+||++++++.+.+.+... ...+..|++.+.++.++++.... +++.+..++..+..++.+.+.+.+
T Consensus 245 t~sK~~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 322 (395)
T 3nx3_A 245 TSAKALG-CGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE-EKILENVNKLTPYLEQSLDELINE 322 (395)
T ss_dssp EECGGGT-TTSCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eeccccc-CCCceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999998 6999999999654425555432 22334788888888888764321 222333333344444444444444
Q ss_pred cC-CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHHHHHH
Q 044773 167 AG-ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRL 244 (289)
Q Consensus 167 ~g-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l 244 (289)
++ +....+. |.++++.++.... ..++...|+ +.||.+.|+. ++++||+++. .+++++++++++|
T Consensus 323 ~~~~~~~~~~-g~~~~~~~~~~~~------~~~~~~~l~-~~Gi~v~~~~------~~~iRi~~~~~~t~e~i~~~l~~l 388 (395)
T 3nx3_A 323 FDFCKKRKGL-GFMQGLSLDKSVK------VAKVIQKCQ-ENALLLISCG------ENDLRFLPPLILQKEHIDEMSEKL 388 (395)
T ss_dssp CTTEEEEEEE-TTEEEEEECTTSC------HHHHHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEeE-EEEEEEEeCCcch------HHHHHHHHH-HCCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHH
Confidence 43 2233333 4577788775321 245777776 6699999863 5799999754 6999999999999
Q ss_pred HHHHHH
Q 044773 245 KAFVDS 250 (289)
Q Consensus 245 ~~~l~~ 250 (289)
++++++
T Consensus 389 ~~~l~~ 394 (395)
T 3nx3_A 389 RKALKS 394 (395)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998763
No 117
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.88 E-value=1.1e-21 Score=176.70 Aligned_cols=220 Identities=11% Similarity=0.039 Sum_probs=139.3
Q ss_pred CCCccE-EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCC-ccChhhhhhccccccCCCCCceEE
Q 044773 9 HLKVKG-VLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPG-FVSIMEILKDRNCENTEVWNRVHI 86 (289)
Q Consensus 9 ~~~~~~-i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~i~ 86 (289)
.+++++ |++++||||||. +..++++|.++|+++|+++|+|++|..+. .+.. ..+...+ +.+++
T Consensus 138 ~~~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~-~~~~~~~~~~~~------------~~di~ 202 (374)
T 2aeu_A 138 IDKDTLVIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARV-RLLFNQPPALKL------------GADLV 202 (374)
T ss_dssp CCTTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHH-HHHTTCCCHHHH------------TCSEE
T ss_pred CCCccEEEEEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCccccc-ccccccCCcccc------------CCcEE
Confidence 357899 999999999997 77899999999999999999999997652 1111 1112222 34588
Q ss_pred EecCccccCCCCceEEEEEecCHHHHHHHHhccc-cC-CCChHHHHHHHHHhCCchHHHHHHHHHHHHHH----HHHHHH
Q 044773 87 VYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS-FG-LVSSQTQYLLSALLSDKKFAQNYISENKKRLK----QRHRKL 160 (289)
Q Consensus 87 i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~-~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~l 160 (289)
++|+||++ +|+|+||+++++ .+.+.+..... +. ..+++.+.++..+++... .+.+++..+..+ ++++.+
T Consensus 203 ~~S~sK~l--~g~~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~~~~~l 277 (374)
T 2aeu_A 203 VTSTDKLM--EGPRGGLLAGKK-ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFN--LERIRKAFERAKNFDLSKIEKL 277 (374)
T ss_dssp EEETTSSS--SSCSCEEEEEEH-HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCC--HHHHHHHHHHHHHCCCHHHHHH
T ss_pred EecCcccc--cCcceEEEEECH-HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999996 467999999965 44444443322 22 367788888877776532 111222222222 224556
Q ss_pred HHHHHhc----CCcee-cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCH-
Q 044773 161 VSGLEKA----GISCL-KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSE- 234 (289)
Q Consensus 161 ~~~l~~~----g~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~- 234 (289)
.+.|.+. |+.+. .+.+.++.|.+...... ..+..+++..+++++||.+.||..|. ..++++||+++..+.
T Consensus 278 ~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gV~v~~g~~~~-~~~~~lRi~~~~~~~~ 353 (374)
T 2aeu_A 278 NKELKAIDDNINIVYERTPTGFVIKRVYKDDTIN---IKKLIEIGFNLLKNYGIITITVAGMP-GASKSLRIDLTSRDAE 353 (374)
T ss_dssp HHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHH---HHHHHHHHHHHHHHHCEECSTTSSSC-SSCCSEEEETTSGGGG
T ss_pred HHhhhhhhhccCcceeeCCceEEEEeeccccccc---ccchHHHHHHHHHhCCEEEecCCCCC-CCCCeEEEEcCCchHH
Confidence 6666552 55654 45555555554432111 01223466677778899999998773 346789999964222
Q ss_pred -HHHHHHHHHHHHHHHHHH
Q 044773 235 -DTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 235 -e~l~~~l~~l~~~l~~~~ 252 (289)
.+++++.+.+++++++..
T Consensus 354 ~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 354 RIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp GSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 236777777777666543
No 118
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.87 E-value=2.7e-21 Score=173.21 Aligned_cols=209 Identities=11% Similarity=0.098 Sum_probs=143.4
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
.++++++++++|+||||.+++ +++|.++|+++|+++|+|++|+.... . ..+.. .+.++++.
T Consensus 142 ~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~---~-~~~~~------------~~~d~~~~ 202 (376)
T 3f0h_A 142 NQNFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFLAD---P-FNMNE------------CGADVMIT 202 (376)
T ss_dssp TSCCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTS---C-CCHHH------------HTCSEEEE
T ss_pred ccCceEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCccccCc---c-ccccc------------cCccEEEe
Confidence 357899999999999999999 99999999999999999999985322 1 22222 24568899
Q ss_pred cCccccC-CCCceEEEEEecCHHHHHHHHhcc-------------------ccCCCChHHHHHHHHHhCCchHHHH--HH
Q 044773 89 SLSKDLG-LPGFRVGAIYSNDDTVVAAATKMS-------------------SFGLVSSQTQYLLSALLSDKKFAQN--YI 146 (289)
Q Consensus 89 s~sK~~g-~~G~r~G~i~~~~~~~~~~~~~~~-------------------~~~~~~~~~q~~~~~~l~~~~~~~~--~~ 146 (289)
|+||.++ .+| +|++++++ .+.+.+.... ..+..+.....++..+++.. .+ .+
T Consensus 203 s~~K~l~~~~G--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~ 276 (376)
T 3f0h_A 203 GSQKVLACPPG--ISVIVLAP-RGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEI---KKHGGA 276 (376)
T ss_dssp ETTTTTCCCSS--CEEEEECH-HHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---HHTTHH
T ss_pred cCcccccCCCc--eEEEEECH-HHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHH---HHhcCH
Confidence 9999998 455 67888854 4444443210 01223333334444444321 22 36
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEE
Q 044773 147 SENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 226 (289)
Q Consensus 147 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~R 226 (289)
++.++.++++++++.+.|++.|+++.++.....++.-.+... +..++...|.+++||.+.||. +...++++|
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~--~~~~~~~lR 348 (376)
T 3f0h_A 277 DAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTA------NAYDIFLKLKDEYGIWICPNG--GEMKDTIFR 348 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSS------CHHHHHHHHHHHSSEECEECC--GGGTTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCC------CHHHHHHHHHHhCCEEEecCc--cccCCCEEE
Confidence 778888999999999999988876665433222221112211 224688888877799999984 233467999
Q ss_pred EEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 227 VCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 227 is~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
|+++. ++++++++++++|++++++
T Consensus 349 is~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 349 VGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHh
Confidence 99953 6999999999999998763
No 119
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.87 E-value=1.2e-21 Score=175.56 Aligned_cols=211 Identities=13% Similarity=0.115 Sum_probs=150.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|++ |+|++|.. +....++..+ +.++++.|
T Consensus 137 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~~------------~~di~~~s 196 (382)
T 4eb5_A 137 DDTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HIDATASV----GQIEVDVEKI------------GADMLTIS 196 (382)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EEECTTTB----TTBCCCHHHH------------TCSEEEEE
T ss_pred CCCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EEEcchhc----CCcccCcccc------------CCCEEEee
Confidence 46899999999999999999 88999999999999 99999982 2222232222 45688999
Q ss_pred CccccCCCCceEEEEEecCHH-HHHHHH-----hccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDT-VVAAAT-----KMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSG 163 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~-~~~~~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (289)
+||.+|.+| +||++++++. +..... .....+..+...+.++..+++.. .+.+++.+++++++++++.+.
T Consensus 197 ~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4eb5_A 197 SNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEIT---AMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp TGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhcCCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHH
Confidence 999988556 6999987653 211110 01112334556666666666532 345778889999999999999
Q ss_pred HHhc-CCceecCCc---eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-----------------CC
Q 044773 164 LEKA-GISCLKSNA---GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-----------------EP 222 (289)
Q Consensus 164 l~~~-g~~~~~~~~---g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----------------~~ 222 (289)
|+++ |+++..+.+ +.++++.++. . +..++...|. ++||.+.||..|.+. .+
T Consensus 272 L~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~l~-~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (382)
T 4eb5_A 272 VLKIEESYLNGHPEKRLPNNVNVRFSY-I------EGESIVLSLD-MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAH 343 (382)
T ss_dssp HTTSTTEEECSCSSSBCTTEEEEEETT-S------CHHHHHHHHH-HHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHT
T ss_pred HhhCCCeEEeCCcccCCCCEEEEEeCC-c------CHHHHHHHHH-HCCEEEeccccccCCCCcccHHHHHcCCChhccC
Confidence 9987 777766542 3356666652 1 1245777775 679999999865432 25
Q ss_pred CeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 223 GWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 223 ~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+++||+++. +++++++.++++|++++++...
T Consensus 344 ~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 799999974 6899999999999999887654
No 120
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.87 E-value=1.8e-22 Score=180.56 Aligned_cols=211 Identities=17% Similarity=0.199 Sum_probs=149.3
Q ss_pred hHHHhhhC---CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQKRH---LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
+++++.++ +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..... ..++..+
T Consensus 135 l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~--------- 198 (371)
T 2e7j_A 135 FAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRM----PVSLKEI--------- 198 (371)
T ss_dssp HHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTB----CCCHHHH---------
T ss_pred HHHHHHhhcccCCeEEEEEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCC----CCChhhc---------
Confidence 34555432 57899999999999999999 79999999999999999999986422 1233332
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEecCHHHHHH-HHhccc---------cCCCChHHHHHHHHHhCCchHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAA-ATKMSS---------FGLVSSQTQYLLSALLSDKKFAQNYISE 148 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~-~~~~~~---------~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 148 (289)
+.+++++|+||.++ ++.|+||++++++. .+. +..... .+..+.....++..+++.. .. +
T Consensus 199 ---~~di~~~s~sK~~~-~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~---~ 267 (371)
T 2e7j_A 199 ---GADFIVGSGHKSMA-ASGPIGVMGMKEEW-AEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHV---RE---R 267 (371)
T ss_dssp ---TCSEEEEEHHHHSS-CCSSCEEEEECTTT-TTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHH---HH---H
T ss_pred ---CCCEEEecCCcCCC-CCCCcEEEEEechh-hhhhccccccCcccccccccCCcCHHHHHHHHHHHHHH---HH---H
Confidence 34588999999998 44599999997654 332 332221 2334445555555555421 22 5
Q ss_pred HHHHH--HHHHHHHHHHHHhcCCceecCC--ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC----C
Q 044773 149 NKKRL--KQRHRKLVSGLEKAGISCLKSN--AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC----T 220 (289)
Q Consensus 149 ~~~~~--~~~~~~l~~~l~~~g~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~ 220 (289)
..+++ +++++++.+.|++.|+++..+. .+.++|++++ +..++...|. ++||.+.| ..+.. .
T Consensus 268 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~ 336 (371)
T 2e7j_A 268 IKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE---------VLYEISKKAK-GGRFFLYR-ELKSRKIHGI 336 (371)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH---------HHHHHHHHSS-SGGGHHHH-HHHHTTEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECC---------CHHHHHHHHH-HCCEEEEe-ccccccccCC
Confidence 56667 8888899999988888887663 3457888875 1245677666 77999988 43321 1
Q ss_pred CCCeEE-EEEec--CCHHHHHHHHHHHHHHHHH
Q 044773 221 EPGWFR-VCFAN--MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 221 ~~~~~R-is~~~--~~~e~l~~~l~~l~~~l~~ 250 (289)
.++++| |+++. ++++++++++++|++++++
T Consensus 337 ~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 337 KPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp CTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 257899 99975 5899999999999998765
No 121
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.87 E-value=6.6e-21 Score=172.95 Aligned_cols=209 Identities=17% Similarity=0.175 Sum_probs=148.5
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.. ....++..+ +.++++.|
T Consensus 168 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~----~~~~~~~~~------------~~di~~~s 228 (420)
T 1t3i_A 168 EKTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAP----HYPLDVQLI------------DCDWLVAS 228 (420)
T ss_dssp TTEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT----TSCCCHHHH------------TCSEEEEE
T ss_pred CCceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccC----CccCchhhc------------CCCEEEEe
Confidence 46899999999999999999 899999999999999999999843 111233222 45689999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhccc---------------------c-CCCChHHHHHHHH-HhCCchHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSS---------------------F-GLVSSQTQYLLSA-LLSDKKFAQNYI 146 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~---------------------~-~~~~~~~q~~~~~-~l~~~~~~~~~~ 146 (289)
+||.+|.+| +||++++ +.+.+.+..... + ...+++.+.++.. +++... ...+
T Consensus 229 ~sK~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~ 303 (420)
T 1t3i_A 229 GHKMCAPTG--IGFLYGK-EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT--DLGM 303 (420)
T ss_dssp GGGTTSCTT--CEEEEEC-HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH--HHCH
T ss_pred hhhhcCCCc--eEEEEEc-hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH--HhHH
Confidence 999888667 8999996 444444432211 1 1244455554333 443211 1235
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCceecCC------ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC
Q 044773 147 SENKKRLKQRHRKLVSGLEKA-GISCLKSN------AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC 219 (289)
Q Consensus 147 ~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~------~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~ 219 (289)
++..++++++++++.+.|++. |+++..+. ++++. +.++. . +..++...| .++||.+.||..|..
T Consensus 304 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~l-~~~gi~v~~~~~~~~ 374 (420)
T 1t3i_A 304 ENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALAS-FNVAG-L------HASDVATMV-DQDGIAIRSGHHCTQ 374 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEE-EEETT-B------CHHHHHHHH-HTTTEECBCSCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEE-EEECC-C------CHHHHHHHH-HHCCeEEeeccccch
Confidence 778888999999999999987 88877664 55554 45653 1 123466554 577999999975532
Q ss_pred C-----C-CCeEEEEEec-CCHHHHHHHHHHHHHHHHHH
Q 044773 220 T-----E-PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 220 ~-----~-~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 251 (289)
. + ++++||+++. +++++++.++++|+++++..
T Consensus 375 ~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 375 PLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp HHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1 2 5789999975 69999999999999988764
No 122
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.87 E-value=6.1e-22 Score=180.74 Aligned_cols=199 Identities=17% Similarity=0.128 Sum_probs=141.1
Q ss_pred EEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCc
Q 044773 14 GVLVTNP-SNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLS 91 (289)
Q Consensus 14 ~i~l~~p-~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~s 91 (289)
.+++++| |||||. +++.+++++|.++|+++|+++|+||+|.++.+.+... ..+... ...+ +.|||
T Consensus 214 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~--~~~~~~--------~~~d---~~t~s 280 (419)
T 2eo5_A 214 AGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLF--AIENFN--------TVPD---VITLA 280 (419)
T ss_dssp EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS--GGGGGT--------CCCS---EEEEC
T ss_pred EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchh--hHHhcC--------CCCC---EEEec
Confidence 3466778 567895 7789999999999999999999999999876554321 112211 1122 34899
Q ss_pred cccCCCC-ceEEEEEecCHHHHHHHH-hccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 044773 92 KDLGLPG-FRVGAIYSNDDTVVAAAT-KMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKAGI 169 (289)
Q Consensus 92 K~~g~~G-~r~G~i~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 169 (289)
|.+| +| +|+||++++++.+ .. . .....+..|++.+.++.++++.. .+ ..++++++++++.+.|+++ +
T Consensus 281 K~~~-~G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~~---~~----~~~~~~~~~~~l~~~L~~~-~ 349 (419)
T 2eo5_A 281 KALG-GGIMPIGATIFRKDLD-FK-PGMHSNTFGGNALACAIGSKVIDIV---KD----LLPHVNEIGKIFAEELQGL-A 349 (419)
T ss_dssp GGGG-TTTSCCEEEEEEGGGC-CC-------CCCCCHHHHHHHHHHHHHH---HH----HHHHHHHHHHHHHHHHTTS-S
T ss_pred cccc-CCccceEEEEEchHhh-cC-CcccCCCCCCCHHHHHHHHHHHHHH---HH----HHHHHHHHHHHHHHHHHHh-h
Confidence 9999 69 9999999976644 32 2 22233447889999888888642 22 6788889999999999876 4
Q ss_pred ceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHHHHHHHHHH
Q 044773 170 SCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 170 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 248 (289)
....+.+ .++++++.... .... ++..|+ ++||.+.|+. .+++||+++. .+++++++++++|++++
T Consensus 350 ~~~~~~g-~~~~i~~~~~~-----~~~~-~~~~l~-~~Gv~v~~~~------~~~lRis~~~~~t~e~i~~~l~~l~~~l 415 (419)
T 2eo5_A 350 DDVRGIG-LAWGLEYNEKK-----VRDR-IIGESF-KRGLLLLPAG------RSAIRVIPPLVISEEEAKQGLDILKKVI 415 (419)
T ss_dssp SEEEEET-TEEEEECSCHH-----HHHH-HHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hheEeee-EEEEEEEecCc-----cHHH-HHHHHH-HCCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 4444444 56677874210 1124 677776 7799999863 4689998853 69999999999999987
Q ss_pred HH
Q 044773 249 DS 250 (289)
Q Consensus 249 ~~ 250 (289)
++
T Consensus 416 ~~ 417 (419)
T 2eo5_A 416 KV 417 (419)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 123
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.87 E-value=1.9e-21 Score=173.93 Aligned_cols=211 Identities=14% Similarity=0.124 Sum_probs=146.0
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|+ +|+|++|+. +....++... +.++++.|
T Consensus 137 ~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~----~~~~~~~~~~------------~~d~~~~s 196 (382)
T 4hvk_A 137 DDTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHIDATASV----GQIEVDVEKI------------GADMLTIS 196 (382)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTB----TTBCCCHHHH------------TCSEEEEE
T ss_pred cCceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhc----CCCCCCchhc------------CCCEEEEe
Confidence 46899999999999999999 8899999999999 999999973 2222222222 45689999
Q ss_pred CccccCCCCceEEEEEecCHHHHH-HHH-----hccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVA-AAT-----KMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSG 163 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~-~~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (289)
+||.+|.+| +|+++++++.... ... .....+..+...+.++..++.. +.+++++.+++++++++++.+.
T Consensus 197 ~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4hvk_A 197 SNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEI---TAMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp SGGGTSCTT--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCc--eEEEEEcCccCcCcccccCCCcCccccCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHH
Confidence 999887556 6777775543100 000 0011222455666666666652 2556788999999999999999
Q ss_pred HHhc-CCceecCCc---eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCC-----------------C
Q 044773 164 LEKA-GISCLKSNA---GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE-----------------P 222 (289)
Q Consensus 164 l~~~-g~~~~~~~~---g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~-----------------~ 222 (289)
|+++ |+++..+.+ +.++++.++.. +..++...|. ++||.+.+|..|+... +
T Consensus 272 L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (382)
T 4hvk_A 272 VLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLSLD-MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAH 343 (382)
T ss_dssp HTTSTTEEECSCSSSBCTTEEEEEETTC-------CHHHHHHHHH-HTTCBCBCC--------CCCHHHHHTTCCHHHHH
T ss_pred HhcCCCeEEeCCccccCCCEEEEEECCC-------CHHHHHHHHH-HCCEEEeeCCccCCCCCcchHHHHHcCCChhhcC
Confidence 9987 777766553 22455555421 1235666665 6799999998887543 5
Q ss_pred CeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 223 GWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 223 ~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+++||+++. ++++++++++++|++++++..+
T Consensus 344 ~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 899999974 6899999999999999988765
No 124
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.87 E-value=7.3e-22 Score=181.11 Aligned_cols=225 Identities=14% Similarity=0.126 Sum_probs=142.5
Q ss_pred hHHHhh-h-CCCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQK-R-HLKVKGVLVTNPSNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~-~-~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
++++++ . .+++++|++++++|++|.++ +++++++|.++|++||+++|+||+|.++...+... ..+..
T Consensus 190 le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~--~~~~~-------- 259 (439)
T 3dxv_A 190 LTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLH--CFEHE-------- 259 (439)
T ss_dssp HHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSS--GGGGT--------
T ss_pred HHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh--HHHhc--------
Confidence 455552 2 23567767766677777765 55569999999999999999999999765544321 11221
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc--cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQR 156 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 156 (289)
+....+.||||++| +|+|+||++++ +.+.+.+... ...+ .+++.+.++.++++.... .+..++++++
T Consensus 260 ---~~~~di~s~sK~~~-~G~riG~~~~~-~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~-----~~~~~~~~~~ 328 (439)
T 3dxv_A 260 ---GFVPDILVLGKGLG-GGLPLSAVIAP-AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR-----DDLPAMAERK 328 (439)
T ss_dssp ---TCCCSEEEECGGGG-TTSCCEEEEEE-HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-----TTHHHHHHHH
T ss_pred ---CCCCCEEEEcchhc-CCcceEEEEEC-HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-----cCHHHHHHHH
Confidence 11112339999999 79999999995 4444444332 2234 778888887777764321 2233344444
Q ss_pred HHHHHHHHHh----cC-CceecCCceEEEEEecCccccC--CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEE
Q 044773 157 HRKLVSGLEK----AG-ISCLKSNAGLFCWVDMRHLLSS--NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 229 (289)
Q Consensus 157 ~~~l~~~l~~----~g-~~~~~~~~g~~~~i~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~ 229 (289)
.+++.+.|.+ ++ +....+. |.++++++...... .......+++..+++ .||.+.|+..+ .+++||++
T Consensus 329 ~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~~ 402 (439)
T 3dxv_A 329 GRLLRDGLSELAKRHPLIGDIRGR-GLACGMELVCDRQSREPARAETAKLIYRAYQ-LGLVVYYVGMN----GNVLEFTP 402 (439)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHHH-HTEECEEESTT----SCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCCHHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEEC
Confidence 4444444443 33 2333344 45666766321100 011233567777774 59999998533 46999998
Q ss_pred ec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 230 AN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 230 ~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+. .+++++++++++|++++++..+
T Consensus 403 ~~~~t~e~i~~~l~~l~~~l~~~~~ 427 (439)
T 3dxv_A 403 PLTITETDIHKALDLLDRAFSELSA 427 (439)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 54 6999999999999999987654
No 125
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.87 E-value=2.2e-21 Score=172.54 Aligned_cols=204 Identities=14% Similarity=0.105 Sum_probs=148.2
Q ss_pred hCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEE
Q 044773 8 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEK-NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHI 86 (289)
Q Consensus 8 ~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~ 86 (289)
..+++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|..... . .. ..+.+++
T Consensus 127 ~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~---~-~~--------------~~~~d~~ 185 (362)
T 3ffr_A 127 VPADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYP---K-FD--------------WTKIDSV 185 (362)
T ss_dssp CCTTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSS---C-CC--------------TTSCSEE
T ss_pred ccCCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCc---c-cC--------------hhHCcEE
Confidence 4568999999999999999999 88899999999 999999999974311 1 11 1124588
Q ss_pred EecCccccC-CCCceEEEEEecCHHHHHHHHhccc-----------------------cCCCChHHHHHHHHHhCCchHH
Q 044773 87 VYSLSKDLG-LPGFRVGAIYSNDDTVVAAATKMSS-----------------------FGLVSSQTQYLLSALLSDKKFA 142 (289)
Q Consensus 87 i~s~sK~~g-~~G~r~G~i~~~~~~~~~~~~~~~~-----------------------~~~~~~~~q~~~~~~l~~~~~~ 142 (289)
+.|+||+++ .+| +|+++++++.+ +.+..... .++.+...+.++..+++...
T Consensus 186 ~~s~~K~~~~~~G--~g~~~~~~~~~-~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-- 260 (362)
T 3ffr_A 186 FFSVQKCFGLPAG--LGVWILNDRVI-EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDML-- 260 (362)
T ss_dssp EEETTSTTCCCSC--CEEEEEEHHHH-HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHH--
T ss_pred EEecccccCCCCc--eEEEEECHHHH-HHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHH--
Confidence 999999998 667 57788865443 33322211 34456666766666665321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC----CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCC
Q 044773 143 QNYISENKKRLKQRHRKLVSGLEKA-GISCLKS----NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSC 217 (289)
Q Consensus 143 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f 217 (289)
...+++..++++++++++.+.|+++ |+++..+ .++.++|+.++. + ..++...|.++ ||.+.||..+
T Consensus 261 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~l~~~-gi~~~~g~~~ 331 (362)
T 3ffr_A 261 QISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM--L------PGEINKILEPF-DMAVGAGYGS 331 (362)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--C------HHHHHHHHGGG-TEEEEECSGG
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--C------HHHHHHHHHHC-CeEEecCccc
Confidence 2226788889999999999999998 8877653 235577777765 1 24677777755 9999998543
Q ss_pred CCCCCCeEEEEEec-CCHHHHHHHHHHHHHHH
Q 044773 218 HCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 218 ~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 248 (289)
..++++||+++. ++++++++++++|++++
T Consensus 332 --~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 332 --KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp --GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred --cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 346899999964 68999999999998764
No 126
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.87 E-value=1.5e-21 Score=178.37 Aligned_cols=216 Identities=16% Similarity=0.143 Sum_probs=146.9
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLG-TTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG-~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++. +++++|++++|+|++| .+++.+++++|.++|+++|+++|+||+|.++.+.+..+ . .+... .
T Consensus 194 le~~i~--~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~-~~~~~--------~ 261 (420)
T 2pb2_A 194 VKAVMD--DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-A-YMHYG--------V 261 (420)
T ss_dssp HHHHCC--TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-H-HHHHT--------C
T ss_pred HHHHhc--cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-H-HHhcC--------C
Confidence 344444 4688988877788888 46999999999999999999999999998775555422 1 12211 1
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh--ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
... + .||||.+| +|+|+||++++++ +.+.+.. ....+..|++.+.++.++++.... ++..++++++++
T Consensus 262 ~~d-i--it~sK~l~-~G~~iG~~~~~~~-l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~-----~~~~~~~~~~~~ 331 (420)
T 2pb2_A 262 TPD-I--LTSAKALG-GGFPVSAMLTTQE-IASAFHVGSHGSTYGGNPLACAVAGAAFDIINT-----PEVLQGIHTKRQ 331 (420)
T ss_dssp CCS-E--EEECGGGG-TTSCCEEEEECHH-HHTTCC----CCEECCCHHHHHHHHHHHHHHSS-----HHHHHHHHHHHH
T ss_pred CCC-e--EEeccccc-CCCceEEEEEhHH-HHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHH
Confidence 112 2 27899999 8999999999654 4443332 122234788888888777764221 244556666777
Q ss_pred HHHHHHHhc--CC---ceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-cC
Q 044773 159 KLVSGLEKA--GI---SCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NM 232 (289)
Q Consensus 159 ~l~~~l~~~--g~---~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~~ 232 (289)
++.+.|++. ++ ....+. |.+++++++.... .+..++...|+ ++||.+.|+. ++++||+++ ..
T Consensus 332 ~l~~~L~~~~~~~~~~~~~~~~-g~~~~v~~~~~~~----~~~~~l~~~l~-~~Gi~v~~~~------~~~iRl~~~~~~ 399 (420)
T 2pb2_A 332 QFVQHLQAIDEQFDIFSDIRGM-GLLIGAELKPKYK----GRARDFLYAGA-EAGVMVLNAG------ADVMRFAPSLVV 399 (420)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEE-TTEEEEEECGGGT----TCHHHHHHHHH-HTTEECEESS------TTEEEECCCTTC
T ss_pred HHHHHHHHHHhcCCCeEEEEec-ceEEEEEECCCch----HHHHHHHHHHH-HCCCEEEeCC------CCEEEEECCCCC
Confidence 777777654 22 223344 4567788764321 12246777777 4799999863 468999985 36
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 044773 233 SEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 233 ~~e~l~~~l~~l~~~l~~~ 251 (289)
+++++++++++|++++++.
T Consensus 400 t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 400 EEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988754
No 127
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.87 E-value=1.1e-21 Score=177.19 Aligned_cols=210 Identities=15% Similarity=0.134 Sum_probs=145.5
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
++++. +++++|++++++||||.++ +.+++++|.++|+++|+++|+||+|.++.+.+... ++ +... ..
T Consensus 179 ~~~i~--~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~-~~~~--------~~ 246 (395)
T 1vef_A 179 KRAVD--EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AF-EHFG--------IV 246 (395)
T ss_dssp HHHCC--TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-TH-HHHT--------CC
T ss_pred HHHhc--cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-Hh-hhcC--------CC
Confidence 44443 4678876655589999765 78899999999999999999999999754433321 11 1211 11
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHh--ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
.. +.||||.++ +|+|+||++++++ +.+.+.. ....+..+++.+.++..+++.. .. .+..+++++++++
T Consensus 247 ~d---~~s~sK~~~-~g~~~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~---~~--~~~~~~~~~~~~~ 316 (395)
T 1vef_A 247 PD---ILTLAKALG-GGVPLGVAVMREE-VARSMPKGGHGTTFGGNPLAMAAGVAAIRYL---ER--TRLWERAAELGPW 316 (395)
T ss_dssp CS---EEEECGGGG-TTSSCEEEEEEHH-HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHH---HH--HTTHHHHHHHHHH
T ss_pred CC---EEEEccccc-CCCceEEEEehHH-HHhhhccCCcCCCcCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHH
Confidence 11 228899999 5999999999654 4444333 1222336778887777777642 22 3466788888899
Q ss_pred HHHHHHhcCCce--ecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-cCCHHH
Q 044773 160 LVSGLEKAGISC--LKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NMSEDT 236 (289)
Q Consensus 160 l~~~l~~~g~~~--~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~~~~e~ 236 (289)
+.+.|++.+.++ ..+..|.++|++++.. . .++...|++++||.+.|+ +++++||+++ ..++++
T Consensus 317 l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~--~------~~l~~~l~~~~gi~v~~~------~~~~iRi~~~~~~~~~~ 382 (395)
T 1vef_A 317 FMEKLRAIPSPKIREVRGMGLMVGLELKEK--A------APYIARLEKEHRVLALQA------GPTVIRFLPPLVIEKED 382 (395)
T ss_dssp HHHHHHTSCCTTEEEEEEETTEEEEEESSC--S------HHHHHHHHHHHCEECEES------STTEEEECCCTTCCHHH
T ss_pred HHHHHHHhhcCceEEEEEEEEEEEEEEcCh--H------HHHHHHHHHHCCeEEecC------CCCEEEEeCCCCCCHHH
Confidence 999998875432 1233456788888642 1 457777774669999986 2579999985 369999
Q ss_pred HHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFV 248 (289)
Q Consensus 237 l~~~l~~l~~~l 248 (289)
+++++++|++++
T Consensus 383 i~~~~~~l~~~l 394 (395)
T 1vef_A 383 LERVVEAVRAVL 394 (395)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 128
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.87 E-value=3.2e-21 Score=177.85 Aligned_cols=221 Identities=13% Similarity=0.100 Sum_probs=143.4
Q ss_pred CCccEEEEeCCCCCCc--cCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 10 LKVKGVLVTNPSNPLG--TTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG--~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
++..++++++|.|++| .+.+.+.+++|.++|++||+++|+||+|.++.+.|... .. +.. +.+..+
T Consensus 223 ~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-a~-~~~-----------~~~pdi 289 (453)
T 4ffc_A 223 AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF-AS-EHE-----------GIVPDI 289 (453)
T ss_dssp GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-TH-HHH-----------TCCCSE
T ss_pred CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc-hh-hhc-----------CCCcch
Confidence 3456778888977776 55588899999999999999999999999876655421 11 221 222335
Q ss_pred ecCccccCCCCceEEEEEecCHHHHHHHHhc--cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 88 YSLSKDLGLPGFRVGAIYSNDDTVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 165 (289)
.||||+++ +|+|+||++++ +.+.+.+... ...+..|++.+.++.++++.... ++..+..++..+..++.+.+.+.
T Consensus 290 ~t~sK~~~-~G~~~G~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~l~~~~~ 366 (453)
T 4ffc_A 290 VTMAKGIA-GGMPLSAVTGR-AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE-LDLPARARAIEASVTSRLSALAE 366 (453)
T ss_dssp EEECGGGG-TTSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhhhhhhc-CCcCeEEEEEC-HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHh
Confidence 68999998 59999999995 4455444322 22344788999888888774321 12233333333333333444444
Q ss_pred hcC-CceecCCceEEEEEecCccc-cCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHHHH
Q 044773 166 KAG-ISCLKSNAGLFCWVDMRHLL-SSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQ 242 (289)
Q Consensus 166 ~~g-~~~~~~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~ 242 (289)
+++ +....+. |.++|+.+.... .........+++..++ ++||.+.|+..|+ +++||+++. .++++++++++
T Consensus 367 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~----~~iRi~~~~~~t~e~i~~~l~ 440 (453)
T 4ffc_A 367 EVDIIGEVRGR-GAMLAIEIVKPGTLEPDAALTKSIAAEAL-SQGVLILTCGTFG----NVIRLLPPLVIGDDLLDEGIT 440 (453)
T ss_dssp HCSSEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECCEECTTS----CEEEECCCTTCCHHHHHHHHH
T ss_pred hCCCeEEEEee-ceEEEEEEecCcccCCCHHHHHHHHHHHH-hCCCEEecCCCCC----CEEEEECCCCCCHHHHHHHHH
Confidence 443 2223333 457777764311 0111123345777766 6699999986553 589999854 69999999999
Q ss_pred HHHHHHHHHH
Q 044773 243 RLKAFVDSIT 252 (289)
Q Consensus 243 ~l~~~l~~~~ 252 (289)
+|.+++++..
T Consensus 441 ~l~~~l~~~~ 450 (453)
T 4ffc_A 441 ALSDIIRAKA 450 (453)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999998653
No 129
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.87 E-value=1.6e-21 Score=179.77 Aligned_cols=218 Identities=11% Similarity=0.089 Sum_probs=138.1
Q ss_pred CccEEEEeCCCCCCc--cCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 11 KVKGVLVTNPSNPLG--TTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG--~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+..++++++|.|++| .+.+++.+++|.++|++||+++|+||+|.++.+.+... . .+.. +....+.
T Consensus 226 ~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~-~~~~-----------~~~pdi~ 292 (451)
T 3oks_A 226 DNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMF-A-CEHE-----------GIDPDLI 292 (451)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-G-GGGG-----------TCCCSEE
T ss_pred CCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccch-h-hhhc-----------CCCCCee
Confidence 455667788866655 44577889999999999999999999999876655421 1 1111 2222244
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhc--cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEK 166 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 166 (289)
||||+++ +|+|+||++++ +.+.+.+... ...+..|++.+.++.++++.... ++..+..++..+..++.+.+.+.+
T Consensus 293 t~sK~l~-~G~~iG~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~ 369 (451)
T 3oks_A 293 VTAKGIA-GGLPLSAVTGR-AEIMDSPHVSGLGGTYGGNPIACAAALATIETIES-EGLVARAQQIEKIMKDRLGRLQAE 369 (451)
T ss_dssp EECGGGG-TTSSCEEEEEE-HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehhhhh-CCcceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 8999998 69999999995 4555444322 22344788999888888764321 122233333333333334444444
Q ss_pred cC-CceecCCceEEEEEecCccc-cCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHHHHH
Q 044773 167 AG-ISCLKSNAGLFCWVDMRHLL-SSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQR 243 (289)
Q Consensus 167 ~g-~~~~~~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~ 243 (289)
++ +....+. |.++|+.+.... .........+++..++ ++||.+.|+..|+ +++||+++. .+++++++++++
T Consensus 370 ~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~----~~iRi~~~~~~t~e~i~~~l~~ 443 (451)
T 3oks_A 370 DDRIGDVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAH-AAGVIVLSCGTYG----NVVRFLPPLSIGDDLLNEGLDV 443 (451)
T ss_dssp CTTEEEEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHH-HTTEECEEECTTS----CEEEECCCTTCCHHHHHHHHHH
T ss_pred CCCeEEEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHH-hCCcEEecCCCCC----CEEEEECCCCCCHHHHHHHHHH
Confidence 43 2223333 457777764311 0011123345777766 6699999986654 589999854 699999999999
Q ss_pred HHHHHHH
Q 044773 244 LKAFVDS 250 (289)
Q Consensus 244 l~~~l~~ 250 (289)
|++++++
T Consensus 444 l~~~l~~ 450 (451)
T 3oks_A 444 LEEVLRG 450 (451)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9998763
No 130
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.86 E-value=8.1e-21 Score=170.43 Aligned_cols=213 Identities=12% Similarity=0.095 Sum_probs=151.9
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEK--NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~--~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++... ++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|+.. ....++.
T Consensus 129 l~~~l~~~-~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~----~~~~~~~------------ 188 (385)
T 2bkw_A 129 ITEKLSQN-SYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCSIG----CEEFEFD------------ 188 (385)
T ss_dssp HHHHHHHS-CCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTTTT----TSCCCTT------------
T ss_pred HHHHHhcC-CCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECccccC----Ccccccc------------
Confidence 45555542 6899999999999999999 88999999999 9999999999732 1111211
Q ss_pred CCCceEEEecCccccC-CCCceEEEEEecCHHHHHHH----------------------Hhccc-----cCCCChHHHHH
Q 044773 80 VWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDTVVAAA----------------------TKMSS-----FGLVSSQTQYL 131 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g-~~G~r~G~i~~~~~~~~~~~----------------------~~~~~-----~~~~~~~~q~~ 131 (289)
..+.++++.|+||.++ .+| +||++++++.+.+.+ ..+.. .+..+...+.+
T Consensus 189 ~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 266 (385)
T 2bkw_A 189 EWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINS 266 (385)
T ss_dssp TTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHH
T ss_pred ccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHH
Confidence 2245688999999775 456 599999665443121 01111 13356666666
Q ss_pred HHHHhCCchHHHHH-HHHHHHHHHHHHHHHHHHH-HhcCCceecCC-----ceEEEEEecCccccCCChhhHHHHHHHHH
Q 044773 132 LSALLSDKKFAQNY-ISENKKRLKQRHRKLVSGL-EKAGISCLKSN-----AGLFCWVDMRHLLSSNTFEAEMELWKKIV 204 (289)
Q Consensus 132 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~-----~g~~~~i~~~~~~~~~~~~~~~~~~~~ll 204 (289)
+..+++.. .++ +++.+++++++++++.+.| ++.|+++..++ .+.++|+.+++ ..++...|.
T Consensus 267 ~~~al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~ 334 (385)
T 2bkw_A 267 LDVALKEI---LEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVAD---------PPDVIAFLK 334 (385)
T ss_dssp HHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSC---------HHHHHHHHH
T ss_pred HHHHHHHH---HHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecCC---------HHHHHHHHH
Confidence 66666532 333 6777888999999999999 88788776532 46678888763 145777775
Q ss_pred HhcCeEEeCCCCCCCCCCCeEEEE-Ee----cCCHHHHHHHHHHHHHHHHH
Q 044773 205 YDVKLNISPGSSCHCTEPGWFRVC-FA----NMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 205 ~~~gi~v~pg~~f~~~~~~~~Ris-~~----~~~~e~l~~~l~~l~~~l~~ 250 (289)
++||.+.+|..+. ..++++||+ ++ .++++++++++++|++++++
T Consensus 335 -~~gi~v~~g~~~~-~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 335 -SHGVVIAGGIHKD-IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp -HTTEECBCCCCTT-TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred -HCCeEEeCCCCcc-cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 6799999987653 245799999 66 25899999999999987643
No 131
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.86 E-value=3.4e-21 Score=176.08 Aligned_cols=213 Identities=15% Similarity=0.130 Sum_probs=143.2
Q ss_pred hHHHhhhC-CCccEEEEeCC--CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhcccccc
Q 044773 2 YQLAQKRH-LKVKGVLVTNP--SNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p--~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (289)
++++++.+ +++++ ++++| +||||. +++.+++++|.++|+++|+++|+||+|.++.+.+... . .+...
T Consensus 194 l~~~l~~~~~~~~~-vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~-~~~~~------ 264 (429)
T 1s0a_A 194 FARLMAAHRHEIAA-VIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-A-CEHAE------ 264 (429)
T ss_dssp HHHHHHHHTTTEEE-EEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-G-GGGGT------
T ss_pred HHHHHHhCCCCEEE-EEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-H-hhhcC------
Confidence 34555532 24555 55566 599995 6688999999999999999999999999865544321 1 11111
Q ss_pred CCCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc-------cccCCCChHHHHHHHHHhCCchHHHHHHHHH
Q 044773 78 TEVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM-------SSFGLVSSQTQYLLSALLSDKKFAQNYISEN 149 (289)
Q Consensus 78 ~d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 149 (289)
... .+.||||.++ +| +|+||+++++ .+.+.+... ...+..|++.+.++.++++... + .+.
T Consensus 265 --~~~---d~~t~sK~l~-~G~~~iG~~~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~---~--~~~ 332 (429)
T 1s0a_A 265 --IAP---DILCLGKALT-GGTMTLSATLTTR-EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILE---S--GDW 332 (429)
T ss_dssp --CCC---SEEEECGGGG-TSSSCCEEEEECH-HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHH---T--CHH
T ss_pred --CCC---CEEEeccccc-CCCccceEEEeCH-HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHH---h--CCH
Confidence 111 1347999998 79 9999999965 445555442 1233367888888877776321 1 133
Q ss_pred HHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeE
Q 044773 150 KKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWF 225 (289)
Q Consensus 150 ~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~ 225 (289)
.++++++++++.+.|+++ ++....+.+ .++|++++...+ ..++...|+ ++||.+.|+ .+++
T Consensus 333 ~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~~~~~~~~~~~------~~~l~~~l~-~~Gi~v~~~-------~~~i 397 (429)
T 1s0a_A 333 QQQVADIEVQLREQLAPARDAEMVADVRVLG-AIGVVETTHPVN------MAALQKFFV-EQGVWIRPF-------GKLI 397 (429)
T ss_dssp HHHHHHHHHHHHHHHGGGGGCTTEEEEEEET-TEEEEEESSCBC------HHHHHHHHH-HTTEECCCB-------TTEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEEEee-EEEEEEECCccc------HHHHHHHHH-HCCCEEecc-------CCEE
Confidence 456667777788888764 233333444 578888765322 245777777 679999873 2589
Q ss_pred EEEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 226 RVCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 226 Ris~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
||+++. .+++++++++++|++++++
T Consensus 398 Ris~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 398 YLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 999753 6999999999999988654
No 132
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.86 E-value=1.9e-21 Score=173.28 Aligned_cols=210 Identities=12% Similarity=0.100 Sum_probs=140.0
Q ss_pred CCccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC--ccCCCCccChhhhhhccccccCCCCCceEE
Q 044773 10 LKVKGVLVTNPSNPL-GTTMSRNELNLLVNFITEKNIHLISDEIYSGT--VFSSPGFVSIMEILKDRNCENTEVWNRVHI 86 (289)
Q Consensus 10 ~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~ 86 (289)
+++++|++++||||| |.+++.+++++|+++|+++|+++|+|++|... ...+ .+...+.. ..+ ++
T Consensus 134 ~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~--------~~d--~~ 200 (357)
T 3lws_A 134 PDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE---KTAAEIAG--------LFD--SI 200 (357)
T ss_dssp CSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT---CCHHHHHT--------TSS--EE
T ss_pred cCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC---CChHHHHh--------cCC--EE
Confidence 458999999999998 99999999999999999999999999998621 1112 22333321 112 44
Q ss_pred EecCccccCCCCceEEEEEecCHHHHHHHHhccc-cC---CCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044773 87 VYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS-FG---LVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVS 162 (289)
Q Consensus 87 i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~-~~---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (289)
+.|+||+++.++. ||++++ +.+.+.+..... +. ..+.+.+.++...++ .+.+.. +.+.++++++.+
T Consensus 201 ~~s~sK~~~~~~g--g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~-~~~~~~~~~l~~ 270 (357)
T 3lws_A 201 YISFYKGLGGIAG--AILAGP-AAFCQTARIWKRRYGGDLISLYPYIVSADYYYE------LRKDRM-GQYYEQAKQLAE 270 (357)
T ss_dssp EEESSSTTCCSSC--EEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH------HHTTCH-HHHHHHHHHHHH
T ss_pred EEeccccCCCCce--EEEEcC-HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHH------HHHHHH-HHHHHHHHHHHH
Confidence 7899999943432 999985 445444443221 11 122233322223332 222333 335777888999
Q ss_pred HHHhc-CCcee-cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec----CCHHH
Q 044773 163 GLEKA-GISCL-KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN----MSEDT 236 (289)
Q Consensus 163 ~l~~~-g~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~----~~~e~ 236 (289)
.|+++ |+++. .+.+++++|++++.... .+..++...| .++||.+.||..+. ++..++|++++. .+.++
T Consensus 271 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~Gi~v~~g~~~~-~~~~~~r~~i~~~~~~~~~~~ 344 (357)
T 3lws_A 271 QFNALPGVHTTPEVPVSNMFHLHFDGQAA----DISPKLEQVQ-EETGLGFVGYLVDK-DGYCSTEISVGDAYGELDQQT 344 (357)
T ss_dssp HHHTSTTEEEESSSCSSSEEEEEEESCHH----HHHHHHHHHH-HHHCEESCSCCEEC-SSEEEEEEEBCTTGGGSCHHH
T ss_pred HHHhCCCCeeccCCCcceEEEEEecCChH----HHHHHHHHHH-HhcCeEEecccccC-CCceEEEEEecchhhhcCHHH
Confidence 99988 88873 56677889999875310 1123465555 47799999997665 355699999852 47899
Q ss_pred HHHHHHHHHHHH
Q 044773 237 LKLSMQRLKAFV 248 (289)
Q Consensus 237 l~~~l~~l~~~l 248 (289)
+++++++|.+++
T Consensus 345 l~~al~~l~~al 356 (357)
T 3lws_A 345 RDAGFARLRQAF 356 (357)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 133
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.86 E-value=3.3e-21 Score=175.42 Aligned_cols=209 Identities=14% Similarity=0.168 Sum_probs=147.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.. ....... ..+.++++.|
T Consensus 162 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~----~~~~~~~------------~~~~di~~~s 222 (423)
T 3lvm_A 162 DDTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVG----KLPIDLS------------QLKVDLMSFS 222 (423)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCTT------------TSCCSEEEEE
T ss_pred CCcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcC----CCCcChh------------hcCCCEEEec
Confidence 46899999999999999999 888999999999999999999742 1111111 2245688999
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhc---------cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKM---------SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKL 160 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~---------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 160 (289)
+||.+|.+| +||++++++.... +... ...+..+...+.++..++... ..++++.++.++++++++
T Consensus 223 ~sK~~g~~g--~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l 296 (423)
T 3lvm_A 223 GHKIYGPKG--IGALYVRRKPRVR-IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIA---KEEMATEMERLRGLRNRL 296 (423)
T ss_dssp STTTTSCSS--CEEEEECBTTBCC-CCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred hHHhcCCCC--eEEEEEeccccCC-CCccccCCcccccccCCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 999887666 8999997543322 2111 112334556666665665532 444788899999999999
Q ss_pred HHHHHhc-CCceecCCc---eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCC---------------
Q 044773 161 VSGLEKA-GISCLKSNA---GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE--------------- 221 (289)
Q Consensus 161 ~~~l~~~-g~~~~~~~~---g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~--------------- 221 (289)
.+.|+++ |+++..+.+ +.++++.+... +..++...|. + |.+.+|..|.+..
T Consensus 297 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~-~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~ 366 (423)
T 3lvm_A 297 WNGIKDIEEVYLNGDLEHGAPNILNVSFNYV-------EGESLIMALK-D--LAVSSGSACTSASLEPSYVLRALGLNDE 366 (423)
T ss_dssp HHHHTTSTTEEEESCSTTBCTTEEEEEETTS-------CHHHHHHHTT-T--EECBCCCC-----CCCCHHHHHHTCCHH
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEeCCC-------CHHHHHHHHh-h--heeccCccccCCCccccHHHHHhCCCcc
Confidence 9999888 888776653 22344444321 1234666554 4 9999998775421
Q ss_pred --CCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 222 --PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 222 --~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
++++||+++. ++++++++++++|++++++..+
T Consensus 367 ~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 367 LAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp HHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 4789999974 6899999999999999988765
No 134
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.86 E-value=6.5e-21 Score=169.84 Aligned_cols=213 Identities=17% Similarity=0.120 Sum_probs=141.3
Q ss_pred CCCccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 9 HLKVKGVLVTNPSNPL-GTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
.+++++|+++|||||+ |.+++.+++++|+++|+++|+++|+|++|...... ....+...+.. ..++++
T Consensus 135 ~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~~~~----------~~d~~~ 203 (359)
T 3pj0_A 135 REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITP-FYQKSAEEICA----------LFDSVY 203 (359)
T ss_dssp SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHH-HHTCCHHHHHT----------TCSEEE
T ss_pred cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchh-hhCCCHHHhhc----------cCCEEE
Confidence 4579999999999998 79999999999999999999999999998643211 11112333321 223556
Q ss_pred ecCccccCCCCceEEEEEecCHHHHHHHHhcc-ccC-C--CChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 88 YSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS-SFG-L--VSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSG 163 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~-~~~-~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (289)
.|+||.++.++ . ||++++ +.+.+.+.... .+. . .......+....+ ++.. +..+.+.++++++.+.
T Consensus 204 ~s~sK~~~~~~-g-g~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l------~~~~-~~~~~~~~~~~~l~~~ 273 (359)
T 3pj0_A 204 VSFYKGIGGIA-G-AILAGN-DDFVQEAKIWKRRYGGDLISLYPYILSADYYF------EKRI-GKMAEYFEAAKGLAER 273 (359)
T ss_dssp EESSSTTCCSS-C-EEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH------HHHG-GGHHHHHHHHHHHHHH
T ss_pred EeccccCCCcc-e-EEEECC-HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH------HHHH-HHhHHHHHHHHHHHHH
Confidence 79999997553 2 777774 55555554321 111 1 1222222222222 2222 3334567888899999
Q ss_pred HHhc-CCcee-cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec----CCHHHH
Q 044773 164 LEKA-GISCL-KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN----MSEDTL 237 (289)
Q Consensus 164 l~~~-g~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~----~~~e~l 237 (289)
|+++ |+++. .+..+.++|++++.... .+..++...| .++||.+.||..|+..+.+++|++++. .+.+++
T Consensus 274 L~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l-~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l 348 (359)
T 3pj0_A 274 FNSCSGVKTVPEVPVSNMFHVYFENSAD----EIGAILTKIQ-DETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNL 348 (359)
T ss_dssp HHTSTTEEEESSSCSSSEEEEEESSCHH----HHHHHHHHHH-HHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHH
T ss_pred HhhCCCceeeccCCcceEEEEEecCccc----hhHHHHHHHH-HhcCcEecCCccccCCCceEEEEEecCccccCCHHHH
Confidence 9988 88875 45666778887764211 1223455555 467999999988876666799998852 478999
Q ss_pred HHHHHHHHHH
Q 044773 238 KLSMQRLKAF 247 (289)
Q Consensus 238 ~~~l~~l~~~ 247 (289)
++++++|.++
T Consensus 349 ~~~l~~l~~~ 358 (359)
T 3pj0_A 349 ELVFRCLEKE 358 (359)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999775
No 135
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.86 E-value=2.9e-21 Score=177.77 Aligned_cols=226 Identities=12% Similarity=0.105 Sum_probs=142.3
Q ss_pred hHHHhhhC-CCccEEEEeCCC-CCCc-cCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPS-NPLG-TTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~-NPtG-~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
+|+++..+ +++++|+++.++ |++| .+++++++++|.++|++||+++|+||+|.++++.|..+ . .+..
T Consensus 200 le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a-~~~~-------- 269 (448)
T 3dod_A 200 LAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-A-CEHE-------- 269 (448)
T ss_dssp HHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-G-GGGG--------
T ss_pred HHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-h-hhhc--------
Confidence 45555532 245555555445 7877 56788899999999999999999999999876655432 1 1111
Q ss_pred CCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHh-------c--cccCCCChHHHHHHHHHhCCchHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATK-------M--SSFGLVSSQTQYLLSALLSDKKFAQNYISE 148 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~-------~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 148 (289)
+....+.+|||+++ +| +|+||++++ +.+.+.+.. . ...+..|++.+.++.++|+.... ++..+.
T Consensus 270 ---~~~~di~t~sK~l~-~G~~~ig~v~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~ 343 (448)
T 3dod_A 270 ---NVQPDLMAAGKGIT-GGYLPIAVTFAT-EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES-ENIVEQ 343 (448)
T ss_dssp ---TCCCSEEEECGGGG-TTSSCCEEEEEE-HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHH
T ss_pred ---CCCCCEEEeccccc-CCcCceEEEEEC-HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc-ccHHHH
Confidence 12222557999998 69 699999995 455555443 2 12334788888888888864321 222333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCccccCC-Ch----hhHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 044773 149 NKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSN-TF----EAEMELWKKIVYDVKLNISPGSSCHCTEPG 223 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~-~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~ 223 (289)
.++..+..++.+.+ +.+++.....+..|.++|+.+....... .+ ....+++..++ +.||.+.|+ .+
T Consensus 344 ~~~~~~~~~~~l~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------~~ 414 (448)
T 3dod_A 344 VAEKSKKLHFLLQD-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL-------GD 414 (448)
T ss_dssp HHHHHHHHHHHHHH-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE-------TT
T ss_pred HHHHHHHHHHHHHH-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc-------CC
Confidence 33333343444444 4443322222223457778876532210 00 00245777777 559999886 25
Q ss_pred eEEEEEec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 224 WFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 224 ~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
++||+++. .+++++++++++|++++++..
T Consensus 415 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 415 VIAFLPPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 89998743 699999999999999998754
No 136
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.1e-20 Score=171.02 Aligned_cols=205 Identities=12% Similarity=0.114 Sum_probs=144.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.. +....++..+ +.++++.|
T Consensus 164 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~------------~~d~~~~s 224 (406)
T 3cai_A 164 KSTRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAA----PYRLLDIRET------------DADVVTVN 224 (406)
T ss_dssp TTEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTT----TTCCCCHHHH------------CCSEEEEE
T ss_pred CCceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEccccc----CCCCCCchhc------------CCCEEEee
Confidence 47899999999999999999 88999999999999999999983 2222233222 45688999
Q ss_pred CccccCCCCceEE-EEEecCHHHHHHHHhccc-----------cCCCChHHHHHHHHHhCCch------------HHHHH
Q 044773 90 LSKDLGLPGFRVG-AIYSNDDTVVAAATKMSS-----------FGLVSSQTQYLLSALLSDKK------------FAQNY 145 (289)
Q Consensus 90 ~sK~~g~~G~r~G-~i~~~~~~~~~~~~~~~~-----------~~~~~~~~q~~~~~~l~~~~------------~~~~~ 145 (289)
+||.+| ++ +| |+++++ .+.+.+..... .++.+...+.++..+++... .+..+
T Consensus 225 ~~K~~g-~~--~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 300 (406)
T 3cai_A 225 AHAWGG-PP--IGAMVFRDP-SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVS 300 (406)
T ss_dssp GGGGTS-CS--CEEEEESCH-HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHH
T ss_pred hhhhcC-CC--cCeEEEEeh-HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhh
Confidence 999887 65 89 999964 44433332211 23345555545444443211 01235
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCceecCC---ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCC------
Q 044773 146 ISENKKRLKQRHRKLVSGLEKA-GISCLKSN---AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGS------ 215 (289)
Q Consensus 146 ~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~------ 215 (289)
+++.+++++++++++.+.|++. |+++..+. ++ ++++.++. . +..++...|. ++||.+.+|.
T Consensus 301 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~-~------~~~~~~~~L~-~~gi~v~~g~~~~~~~ 371 (406)
T 3cai_A 301 MQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHK-V------PADRVVQRLA-DNGILAIANTGSRVLD 371 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETT-B------CHHHHHHHHH-HTTEECEECCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECC-c------CHHHHHHHHH-HCCcEEecCChHHHHH
Confidence 7888899999999999999987 77776653 44 56677653 1 1245777665 6799999987
Q ss_pred CCCCC-CCCeEEEEEec-CCHHHHHHHHHHHHH
Q 044773 216 SCHCT-EPGWFRVCFAN-MSEDTLKLSMQRLKA 246 (289)
Q Consensus 216 ~f~~~-~~~~~Ris~~~-~~~e~l~~~l~~l~~ 246 (289)
.++.. ..+++||+++. +++++++.++++|++
T Consensus 372 ~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 372 VLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp HHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred HcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 33332 35789999975 689999999999875
No 137
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.86 E-value=5e-21 Score=176.78 Aligned_cols=230 Identities=9% Similarity=0.022 Sum_probs=144.2
Q ss_pred hHHHhhhC-CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQKRH-LKVKGVLVTNP-SNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p-~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
+++++... ++..++++++| +|++|. +++++++++|.++|++||+++|+||+|.+++..|..+ ..+..
T Consensus 208 le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~--~~~~~-------- 277 (459)
T 4a6r_A 208 LEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF--GHQHF-------- 277 (459)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS--HHHHH--------
T ss_pred HHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc--hHhhc--------
Confidence 34445432 23334566666 455555 5599999999999999999999999999876665432 12221
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHH---h--ccccCCCChHHHHHHHHHhCCchHHHHHHHHHH-HH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAAT---K--MSSFGLVSSQTQYLLSALLSDKKFAQNYISENK-KR 152 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~---~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~ 152 (289)
+....+.+|||+++.+|+|+||++++ +.+.+.+. . ....+..|++.+.++.++|+.... ++..+..+ +.
T Consensus 278 ---~~~pdi~t~sK~l~gg~~~lg~v~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~ 352 (459)
T 4a6r_A 278 ---GFQPDLFTAAKGLSSGYLPIGAVFVG-KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRD-EGIVQRVKDDI 352 (459)
T ss_dssp ---TCCCSEEEECGGGGTTSSCCEEEEEC-HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHH-TCHHHHHHHTH
T ss_pred ---CCCCCeeehhhhhcCCCCCccceeeC-HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhc-chHHHHHHHHH
Confidence 11122447899998445999999995 45555544 1 122334888999988888874321 22233333 33
Q ss_pred HHHHHHHHHHHHHhcC-CceecCCceEEEEEecCccccC-----CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEE
Q 044773 153 LKQRHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLSS-----NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 226 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g-~~~~~~~~g~~~~i~~~~~~~~-----~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~R 226 (289)
.+..++.+.+.|.+++ +....+.| .++++++...... .......+++..++ ++||.+.|+. +++|
T Consensus 353 ~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-------~~iR 423 (459)
T 4a6r_A 353 GPYMQKRWRETFSRFEHVDDVRGVG-MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFF-RNNLIMRACG-------DHIV 423 (459)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEET-TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHH-HTTEECEEET-------TEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCccccccccchHHHHHHHHHHHH-HCCeEEecCC-------CEEE
Confidence 3344444444454442 33444554 4555666542111 00111345777776 5599999862 6899
Q ss_pred EEEec-CCHHHHHHHHHHHHHHHHHHHHhh
Q 044773 227 VCFAN-MSEDTLKLSMQRLKAFVDSITTTL 255 (289)
Q Consensus 227 is~~~-~~~e~l~~~l~~l~~~l~~~~~~~ 255 (289)
|+++. .+++++++++++|++++++....+
T Consensus 424 i~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 453 (459)
T 4a6r_A 424 SAPPLVMTRAEVDEMLAVAERCLEEFEQTL 453 (459)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99743 699999999999999998876543
No 138
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.85 E-value=8.5e-21 Score=173.75 Aligned_cols=227 Identities=11% Similarity=0.082 Sum_probs=138.0
Q ss_pred hHHHhhhCCCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p-~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++..+++..++++++| +|++|.+. +++++++|.++|+++|+++|+||+|.++ ..+.. ...+..
T Consensus 192 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~--~~~~~~--------- 259 (434)
T 3l44_A 192 LKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYG--GAQDLL--------- 259 (434)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSS--CHHHHH---------
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecccc--HHHHHc---------
Confidence 4556655433334466666 55666555 8899999999999999999999999987 44432 112221
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-----ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-----MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
+....+.||||.+| +|+|+||++++ +.+.+.+.. ....+..|++.+.++.++++.... ++..++.++..+
T Consensus 260 --~~~~di~t~sK~~~-~G~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~-~~~~~~~~~~~~ 334 (434)
T 3l44_A 260 --GVTPDLTALGKVIG-GGLPIGAYGGK-KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ-EGLYEKLDELGA 334 (434)
T ss_dssp --TCCCSEEEEEGGGG-TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHH
T ss_pred --CCCCCeeehhhhhc-CCcCeeeEEEc-HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHH
Confidence 11122568999998 89999999885 555554433 122344788888887777763211 111222222222
Q ss_pred HHHHHHHHHHHhcCCceecCCceEEEEEecCccccC-------CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 044773 155 QRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSS-------NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 227 (289)
Q Consensus 155 ~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ri 227 (289)
..++.+.+.+.+.++....+..|.++++.+...... .......++...|+ ++||.+.|+.. +++|+
T Consensus 335 ~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~------~~~rl 407 (434)
T 3l44_A 335 TLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML-QEGVNLAPSKY------EAWFL 407 (434)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH-HTTEECCSSTT------CCEEC
T ss_pred HHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHH-HCCeEEeecCC------CcEEE
Confidence 333333333333444323233345566666432110 01122245667666 56999998742 46898
Q ss_pred EEecCCHHHHHHHHHHHHHHHHHHHH
Q 044773 228 CFANMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 228 s~~~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
++. .+++++++++++|++++++..+
T Consensus 408 ~~~-~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 408 TTE-HTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecc-cCHHHHHHHHHHHHHHHHHHHh
Confidence 765 5999999999999999987653
No 139
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.85 E-value=2.1e-20 Score=172.05 Aligned_cols=233 Identities=15% Similarity=0.146 Sum_probs=144.8
Q ss_pred hHHHhhhC--CCccEEEEeCCCC-CCccCCCHHHHHHHHHHHHHcCCEEEEecCCCC----------CccCCCCccChhh
Q 044773 2 YQLAQKRH--LKVKGVLVTNPSN-PLGTTMSRNELNLLVNFITEKNIHLISDEIYSG----------TVFSSPGFVSIME 68 (289)
Q Consensus 2 l~~~~~~~--~~~~~i~l~~p~N-PtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~----------~~~~~~~~~~~~~ 68 (289)
+++++... +.+++|++++|+| |||.+++.+++++|+++|+++|+++|+||+|.. ..+.+....++.+
T Consensus 163 l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~ 242 (456)
T 2ez2_A 163 LQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVH 242 (456)
T ss_dssp HHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHH
T ss_pred HHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhh
Confidence 34555432 2358999999988 999999999999999999999999999999985 2343322111110
Q ss_pred hhhccccccCCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccc-------cCCCChHHHHH-HHHHhCCch
Q 044773 69 ILKDRNCENTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSS-------FGLVSSQTQYL-LSALLSDKK 140 (289)
Q Consensus 69 ~~~~~~~~~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~-------~~~~~~~~q~~-~~~~l~~~~ 140 (289)
... ....++++ |++|..+ +| +.||++++++.+.+.+..... +...++....+ +..+++
T Consensus 243 ~~~--------~~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~--- 308 (456)
T 2ez2_A 243 EMF--------SYADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE--- 308 (456)
T ss_dssp HHH--------TTCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHH---
T ss_pred hhc--------ccCCEEEE-eCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHH---
Confidence 111 11223434 7888765 66 689999965665554433211 12233332222 222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCc---cccCCChhhHHHHHHHHHHhcCeEEeC-CCC
Q 044773 141 FAQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRH---LLSSNTFEAEMELWKKIVYDVKLNISP-GSS 216 (289)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~ 216 (289)
.+. ++..++.+++.+++.+.|.+.|+++..|.+++++|+++.. ..+...+ ....++..|++++||.+.+ |..
T Consensus 309 ~~~---~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~~g~~ 384 (456)
T 2ez2_A 309 AMQ---YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEF-PAQSLAASIYVETGVRSMERGII 384 (456)
T ss_dssp HTC---HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGGGC-HHHHHHHHHHHHHSEECEEESHH
T ss_pred HhH---HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCChhhc-cHHHHHHHHHHhcCeeeeccccc
Confidence 111 2233334555667778887778888778888999998753 1111111 1223466665788999766 432
Q ss_pred C-------C---CCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHHHH
Q 044773 217 C-------H---CTEPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 217 f-------~---~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~ 252 (289)
| + ..+.+++||+++. ++++++++++++|++++++..
T Consensus 385 ~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 385 SAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp HHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred ccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 2 1 1224789999974 589999999999999987654
No 140
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.85 E-value=1.2e-20 Score=170.96 Aligned_cols=204 Identities=10% Similarity=0.031 Sum_probs=144.5
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
++++++|++++|+||||.+++.+++.++ +|+++|+|++|+.+. .+ .++. +.++++.
T Consensus 163 ~~~~~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~---~~-~~~~--------------~~di~~~ 218 (398)
T 2fyf_A 163 DPSVDVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGG---LP-VDIA--------------ETDAYYF 218 (398)
T ss_dssp CTTCSEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTT---SC-CCGG--------------GCSEEEE
T ss_pred cCCCCEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccCC---cc-cCcc--------------cCcEEEE
Confidence 3578999999999999999996655544 899999999998532 11 1111 2347899
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHh-----------------------ccccCCCChHHHHHHHHHhCCchHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATK-----------------------MSSFGLVSSQTQYLLSALLSDKKFAQNY 145 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-----------------------~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 145 (289)
|+||.+|.+| ++||++++++.+ +.+.. ...+++.+...+.++..+++.. .+.
T Consensus 219 s~sK~~~~~g-g~g~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~---~~~ 293 (398)
T 2fyf_A 219 APQKNFASDG-GLWLAIMSPAAL-SRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWL---VGN 293 (398)
T ss_dssp CTTSTTCSCS-SEEEEEECHHHH-HHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---HHH
T ss_pred ecCcccCCCC-ceEEEEECHHHH-HHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH---HHc
Confidence 9999999665 599999965443 33311 1122335556666777666532 333
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhc-CCceec--C--CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC
Q 044773 146 --ISENKKRLKQRHRKLVSGLEKA-GISCLK--S--NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH 218 (289)
Q Consensus 146 --~~~~~~~~~~~~~~l~~~l~~~-g~~~~~--~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~ 218 (289)
+++.+++++++++++.+.|+++ |+++.. + .+++++|++++...+ ..++...|.++ ||.+.+|. .
T Consensus 294 g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~L~~~-gI~v~~g~--~ 364 (398)
T 2fyf_A 294 GGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVD------AGTVAKILRAN-GIVDTEPY--R 364 (398)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSC------HHHHHHHHHHT-TCBCCSCC--T
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCC------HHHHHHHHHHC-CcEEecCc--c
Confidence 6788899999999999999988 777763 4 345588888864222 24677777744 99999872 2
Q ss_pred CCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 219 CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 219 ~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
..+.+++||+++. ++++++++++++|++++++
T Consensus 365 ~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 365 KLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp TTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 2335799999974 6899999999999988753
No 141
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.85 E-value=1.3e-20 Score=173.03 Aligned_cols=216 Identities=16% Similarity=0.133 Sum_probs=146.4
Q ss_pred hHHHhhhCCCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNP-SNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p-~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
++++++ .+++++|+ ++| +|++|. +++.+++++|.++|+++|+++|+||+|.++.+++..+ . .+...
T Consensus 215 le~~l~-~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~-~~~~~-------- 282 (439)
T 2oat_A 215 LERALQ-DPNVAAFM-VEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-A-VDYEN-------- 282 (439)
T ss_dssp HHHHTT-STTEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-G-GGGGT--------
T ss_pred HHHHhC-CCCEEEEE-EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-h-HHHhC--------
Confidence 445554 23566655 556 678896 5799999999999999999999999998765555322 1 11211
Q ss_pred CCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc--cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQR 156 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 156 (289)
....+.||||.+| +| +|+||+++++ .+.+.+... ...+..|++.+.++.++++.. .+ .+..++++++
T Consensus 283 ---~~~Di~t~sK~l~-~G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~ 352 (439)
T 2oat_A 283 ---VRPDIVLLGKALS-GGLYPVSAVLCDD-DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVL---EE--ENLAENADKL 352 (439)
T ss_dssp ---CCCSEEEECGGGG-TTSSCCEEEEECH-HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHH
T ss_pred ---CCCcEEEeccccc-CCCCCeEEEEECH-HHHhccCCCCcccCCCcCHHHHHHHHHHHHHH---hh--hhHHHHHHHH
Confidence 1111339999999 78 9999999964 444443321 222346788888777777643 21 2456778888
Q ss_pred HHHHHHHHHhcCCcee--cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CC
Q 044773 157 HRKLVSGLEKAGISCL--KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MS 233 (289)
Q Consensus 157 ~~~l~~~l~~~g~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~ 233 (289)
.+++.+.|+++++.+. .+..|.+++++++.... .+..+++..|+ ++||.+.|+ +++++||+++. ++
T Consensus 353 ~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~----~~~~~l~~~l~-~~Gv~v~~~------~~~~iRi~~~~~~t 421 (439)
T 2oat_A 353 GIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKD----WDAWKVCLRLR-DNGLLAKPT------HGDIIRFAPPLVIK 421 (439)
T ss_dssp HHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSS----CCHHHHHHHHH-HTTEECCBS------SSSEEEECCCTTCC
T ss_pred HHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCcc----HHHHHHHHHHH-HCCeEEecC------CCCEEEEECccCCC
Confidence 8899999988654421 22334677788765310 12246777777 569999984 25789998853 69
Q ss_pred HHHHHHHHHHHHHHHHH
Q 044773 234 EDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 234 ~e~l~~~l~~l~~~l~~ 250 (289)
++++++++++|++++++
T Consensus 422 ~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 422 EDELRESIEIINKTILS 438 (439)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988753
No 142
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.85 E-value=1.6e-20 Score=172.16 Aligned_cols=217 Identities=15% Similarity=0.138 Sum_probs=145.0
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
++++++ .+++++|+++..+|++|.+ ++.+++++|.++|+++|+++|+||+|.++.+.+... . .+..
T Consensus 204 le~~l~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~-~~~~---------- 270 (433)
T 1z7d_A 204 LEEELK-DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-C-VHHY---------- 270 (433)
T ss_dssp HHHHHT-STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-G-GGGG----------
T ss_pred HHHHhC-CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-h-hHhc----------
Confidence 455554 3467775544336788975 788999999999999999999999998765544321 1 1221
Q ss_pred CCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc--cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
+....+.||||.+| +| +|+||+++++ .+.+.+... ...+..|++.+.++.++++... + .+..++++++.
T Consensus 271 -~~~~di~t~sK~l~-~G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~---~--~~~~~~~~~~~ 342 (433)
T 1z7d_A 271 -NVKPDVILLGKALS-GGHYPISAVLAND-DIMLVIKPGEHGSTYGGNPLAASICVEALNVLI---N--EKLCENAEKLG 342 (433)
T ss_dssp -TCCCSEEEECGGGG-TTSSCCEEEEECH-HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHH---H--TTHHHHHHHHH
T ss_pred -CCCCCEEEECcccc-CCCCCeEEEEECH-HHHhhhccccccccCCCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHH
Confidence 11111338999999 89 9999999964 444443321 2223467888887777775421 1 23455667777
Q ss_pred HHHHHHHHhc--CCce--ecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-C
Q 044773 158 RKLVSGLEKA--GISC--LKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-M 232 (289)
Q Consensus 158 ~~l~~~l~~~--g~~~--~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~ 232 (289)
+++.+.|+++ ++.. ..+..|.++|++++... .+..+++..|+ ++||.+.|+ +.+++||+++. +
T Consensus 343 ~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~l~-~~Gv~v~~~------~~~~iRi~~~~~~ 410 (433)
T 1z7d_A 343 GPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL-----VNVLDICLKLK-ENGLITRDV------HDKTIRLTPPLCI 410 (433)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT-----CCHHHHHHHHH-HTTEECCEE------TTTEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh-----hHHHHHHHHHH-HCCeEEecC------CCCEEEEECCcCC
Confidence 7777777764 4432 12223457778876421 11246777777 569999985 24689999864 6
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 044773 233 SEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 233 ~~e~l~~~l~~l~~~l~~~ 251 (289)
+++++++++++|++++++.
T Consensus 411 t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 411 TKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 143
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.85 E-value=8.5e-20 Score=166.00 Aligned_cols=220 Identities=11% Similarity=0.077 Sum_probs=146.6
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC-ccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGT-VFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++... ++++|++++|+||+ ..+ +++|.++|+++|+++|+||+|... .+.+... +...
T Consensus 164 l~~~i~~~-~~~~v~~~~~~~~~--~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~-~~~~------------ 224 (425)
T 3ecd_A 164 VEALAQQH-KPSLIIAGFSAYPR--KLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHA-NPVE------------ 224 (425)
T ss_dssp HHHHHHHH-CCSEEEEECSCCCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC-CGGG------------
T ss_pred HHHHHhhc-CCcEEEEccccCCC--cCC---HHHHHHHHHHcCCEEEEECcChHhhhhccccc-Cchh------------
Confidence 44555543 68999999999974 333 899999999999999999996533 2323221 1111
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcccc---CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
..+++++|+||.+ +|.|.||++++++.+.+.+...... +..+.....++..++... +.+++++.+++++++.
T Consensus 225 -~~di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~ 299 (425)
T 3ecd_A 225 -HAHVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEA--LTDDFKTYIDRVLANA 299 (425)
T ss_dssp -TCSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHH
T ss_pred -cCcEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHH
Confidence 1238899999998 5567899999877666655443221 123334444444333321 1345677888899999
Q ss_pred HHHHHHHHhcCCceecC-CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe----CCCCCCCCCCCeEEEEEec-
Q 044773 158 RKLVSGLEKAGISCLKS-NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS----PGSSCHCTEPGWFRVCFAN- 231 (289)
Q Consensus 158 ~~l~~~l~~~g~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~~~~~~~Ris~~~- 231 (289)
+++.+.|.+.|+++..+ .+++++|+.++..... .+.+...++++||.+. ||..+.+...+.+|+++..
T Consensus 300 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~ 373 (425)
T 3ecd_A 300 QALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLK------GAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAG 373 (425)
T ss_dssp HHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCC------HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHH
T ss_pred HHHHHHHHhCCCeeccCCCCceEEEEEeCCCCCC------HHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhh
Confidence 99999999888887754 4567888887643211 1234444567899999 5443333345689999632
Q ss_pred ----CCHHHHHHHHHHHHHHHHHH
Q 044773 232 ----MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 232 ----~~~e~l~~~l~~l~~~l~~~ 251 (289)
.++++++++++.|++++++.
T Consensus 374 ~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 374 TTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eeccCCHHHHHHHHHHHHHHHhcc
Confidence 24899999999999998876
No 144
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.84 E-value=4.2e-20 Score=170.53 Aligned_cols=237 Identities=16% Similarity=0.198 Sum_probs=148.1
Q ss_pred hHHHhhhC--CCccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEecCCCC--CccC-----CCCccChhhhhh
Q 044773 2 YQLAQKRH--LKVKGVLVTNPSNPL-GTTMSRNELNLLVNFITEKNIHLISDEIYSG--TVFS-----SPGFVSIMEILK 71 (289)
Q Consensus 2 l~~~~~~~--~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~--~~~~-----~~~~~~~~~~~~ 71 (289)
+++++... +++++|++++||||+ |.+++.+++++|+++|++||+++|+|+++.. ..|. +....++.++.+
T Consensus 172 le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (467)
T 1ax4_A 172 LKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIF 251 (467)
T ss_dssp HHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHH
T ss_pred HHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhh
Confidence 45566543 268999999999999 8999999999999999999999999998653 1000 111123333321
Q ss_pred ccccccCCCCCceEEEecCccccCCC-CceEEEEEecCH-HHHHHHHhc----c---ccCCCChHHHHHHHHHhCCchHH
Q 044773 72 DRNCENTEVWNRVHIVYSLSKDLGLP-GFRVGAIYSNDD-TVVAAATKM----S---SFGLVSSQTQYLLSALLSDKKFA 142 (289)
Q Consensus 72 ~~~~~~~d~~~~~i~i~s~sK~~g~~-G~r~G~i~~~~~-~~~~~~~~~----~---~~~~~~~~~q~~~~~~l~~~~~~ 142 (289)
+. ....++++.|+||.+|++ | ||++++++ .+.+.+... . .++..+.....+++..+.....
T Consensus 252 ~~------~~~~d~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~- 321 (467)
T 1ax4_A 252 DM------YKYADALTMSAKKDPLLNIG---GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE- 321 (467)
T ss_dssp HH------GGGCSEEEEETTSTTCCSSC---EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC-
T ss_pred hh------ccccceEEEeccccCCCCcc---eEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh-
Confidence 00 001125668999999876 5 78888734 444433221 1 1222233333333333332110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCccccCC--ChhhHHHHHHHHHHhcCeEEeC-CCCC-C
Q 044773 143 QNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSN--TFEAEMELWKKIVYDVKLNISP-GSSC-H 218 (289)
Q Consensus 143 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~--~~~~~~~~~~~ll~~~gi~v~p-g~~f-~ 218 (289)
++.++ ...++.+++.+.|.+.++++..+.+|+++|+++....... .-.+..+++..|++++||.+.| |..+ +
T Consensus 322 ~~~~~----~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~ 397 (467)
T 1ax4_A 322 EEYLH----YRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLG 397 (467)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHC
T ss_pred hhHHH----HHHHHHHHHHHHHHhCCCCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccc
Confidence 11222 2235567788888777888878888999999843211000 0013456888885688999998 5432 1
Q ss_pred C---------CCCCeEEEEEe-c-CCHHHHHHHHHHHHHHHHHHH
Q 044773 219 C---------TEPGWFRVCFA-N-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 219 ~---------~~~~~~Ris~~-~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
. ...+++||+++ . ++++++++++++|++++++..
T Consensus 398 ~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 398 RDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp BCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred cccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 1 12379999997 3 689999999999999988753
No 145
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.84 E-value=1.3e-20 Score=172.21 Aligned_cols=224 Identities=12% Similarity=0.077 Sum_probs=137.2
Q ss_pred hHHHhhhCC-CccEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHL-KVKGVLVTNPSNPLGTTMS-RNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~-~~~~i~l~~p~NPtG~~~~-~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++..++ ++++|+++.++|++|.+.+ ++++++|.++|+++|+++|+||+|.++ ..+.. ...+..
T Consensus 189 le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~--~~~~~~--------- 256 (427)
T 3fq8_A 189 VKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG--GVQEKF--------- 256 (427)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT--HHHHHT---------
T ss_pred HHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc--hhhHhc---------
Confidence 466666644 4556555544677776665 667999999999999999999999977 44432 111121
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-----ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-----MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
+....+.||||+++ +|+|+||++++ +.+.+.+.. ....+..|++.+.++.++++.... ++..+..++..+
T Consensus 257 --~~~~di~t~sK~~~-~G~~~G~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~ 331 (427)
T 3fq8_A 257 --GVTPDLTTLGKIIG-GGLPVGAYGGK-REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ-PGTYEYLDQITK 331 (427)
T ss_dssp --TCCCSEEEECGGGG-TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHH
T ss_pred --CCCCChhhhhhhhh-CCcceEEEEEc-HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHH
Confidence 12222578999999 89999999994 555544432 122233678888887777752211 111222222223
Q ss_pred HHHHHHHHHHHhcCCceecCCceEEEEEecCccccC-------CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 044773 155 QRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSS-------NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 227 (289)
Q Consensus 155 ~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ri 227 (289)
..++.+.+.+.+.++....+..|.++++.+...... .......+++..++ ++||.+.|+.. ..+|+
T Consensus 332 ~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~------~r~~~ 404 (427)
T 3fq8_A 332 RLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF------EAGFT 404 (427)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT------SCEEC
T ss_pred HHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHH-HCCcEEecCCC------CCEEe
Confidence 333333343444444434444567788887642111 01112245777776 66999998753 24555
Q ss_pred EEecCCHHHHHHHHHHHHHHHHH
Q 044773 228 CFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 228 s~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
++. .+++++++++++|++++++
T Consensus 405 ~~~-~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 405 SLA-HTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHH
T ss_pred eCc-CCHHHHHHHHHHHHHHHHh
Confidence 544 5999999999999998864
No 146
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.84 E-value=6e-21 Score=169.28 Aligned_cols=204 Identities=15% Similarity=0.167 Sum_probs=130.8
Q ss_pred CccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC--ccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 11 KVKGVLVTNPSNPL-GTTMSRNELNLLVNFITEKNIHLISDEIYSGT--VFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 11 ~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
++++|++++||||| |.+++.+++++|+++|+++|+++|+|++|... .+.+. +...+.. ..+ .++
T Consensus 132 ~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~--------~~d--~~~ 198 (347)
T 1jg8_A 132 RTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV---PVKEYAG--------YAD--SVM 198 (347)
T ss_dssp CEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC---CHHHHHH--------TCS--EEE
T ss_pred CceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC---ChHHhcc--------ccc--EEE
Confidence 68999999999999 99999999999999999999999999997521 11122 2222211 123 345
Q ss_pred ecCccccCCCCceEEE-EEecCHHHHHHHHhccc-cC---CCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044773 88 YSLSKDLGLPGFRVGA-IYSNDDTVVAAATKMSS-FG---LVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVS 162 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~-i~~~~~~~~~~~~~~~~-~~---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (289)
.|+||.++.+ +|+ +++ ++.+.+.+..... +. ..+.+.+.+....++.. .+...+ ..++++.+.+
T Consensus 199 ~s~sK~l~~~---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~-~~~~~~~l~~ 267 (347)
T 1jg8_A 199 FCLSKGLCAP---VGSVVVG-DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKM------VDRLKE-DHENARFLAL 267 (347)
T ss_dssp EESSSTTCCS---SCEEEEE-CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS------STTHHH-HHHHHHHHHH
T ss_pred EecccccCCC---ceEEEEc-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH------HHHHHH-HHHHHHHHHH
Confidence 5899999743 475 555 4544443332211 11 12334444333334321 111122 2345677888
Q ss_pred HHHhcCCcee-cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-cCCHHHHHHH
Q 044773 163 GLEKAGISCL-KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NMSEDTLKLS 240 (289)
Q Consensus 163 ~l~~~g~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~~~~e~l~~~ 240 (289)
.|+++|+++. .+..+.++|++++.. . .+..++...|. ++||.+.|+. ++++|+++. .+++++++++
T Consensus 268 ~L~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~l~-~~gi~v~~~~------~~~iRl~~~~~~~~e~i~~~ 335 (347)
T 1jg8_A 268 KLKEIGYSVNPEDVKTNMVILRTDNL--K---VNAHGFIEALR-NSGVLANAVS------DTEIRLVTHKDVSRNDIEEA 335 (347)
T ss_dssp HHHHHTCBCCGGGCCSSEEEEECTTS--S---SCHHHHHHHHH-HHTEECEEEE------TTEEEEECCTTSCHHHHHHH
T ss_pred HHHhcCceeccCCCcceEEEEEcccc--c---CCHHHHHHHHH-HCCCEEecCC------CCeEEEEeCCCCCHHHHHHH
Confidence 8877777652 233445788888631 1 12246788776 6699998752 468999994 4699999999
Q ss_pred HHHHHHHHHH
Q 044773 241 MQRLKAFVDS 250 (289)
Q Consensus 241 l~~l~~~l~~ 250 (289)
+++|++++++
T Consensus 336 ~~~l~~~l~~ 345 (347)
T 1jg8_A 336 LNIFEKLFRK 345 (347)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 147
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.84 E-value=2.7e-20 Score=172.51 Aligned_cols=228 Identities=11% Similarity=0.012 Sum_probs=149.0
Q ss_pred CccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 11 KVKGVLVTNPSNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
++.+|+++.++|++|.+. +++++++|.++|+++|+++|+||+|.+++..|..+ ..+... ....+.+
T Consensus 223 ~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~--a~~~~~-----------v~pdi~t 289 (472)
T 3hmu_A 223 RVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF--GTQTMG-----------IRPHIMT 289 (472)
T ss_dssp GEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC--HHHHHT-----------CCCSEEE
T ss_pred CEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc--hhHHhC-----------CCCceee
Confidence 345544444477777755 88999999999999999999999999876666432 122221 1111447
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhc----cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHH-HHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKM----SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLK-QRHRKLVSGL 164 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~l 164 (289)
|||+++.+|+|+||++++ +.+.+.+... ...+..|++.+.++.++|+... + +...+.++ ++.+++++.|
T Consensus 290 ~sK~l~gg~~plG~v~~~-~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~---~--~~~~~~~~~~~~~~l~~~L 363 (472)
T 3hmu_A 290 IAKGLSSGYAPIGGSIVC-DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILE---E--ENILDHVRNVAAPYLKEKW 363 (472)
T ss_dssp ECGGGTTTSSCCEEEEEE-HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHH---H--TTHHHHHHHTHHHHHHHHH
T ss_pred echhhhcCCcceEEEEEC-HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHH---H--hHHHHHHHHHHHHHHHHHH
Confidence 899998555999999995 5555555311 1233478888888888776422 1 23344455 5556666666
Q ss_pred Hhc----CCceecCCceEEEEEecCcccc-CCC-----hhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CC
Q 044773 165 EKA----GISCLKSNAGLFCWVDMRHLLS-SNT-----FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MS 233 (289)
Q Consensus 165 ~~~----g~~~~~~~~g~~~~i~~~~~~~-~~~-----~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~ 233 (289)
+++ .+....+.|. ++++++..... ... .....+++..|+ +.||.+.|+. +++||++.. .+
T Consensus 364 ~~l~~~~~v~~vr~~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-------~~iRi~p~~~~t 434 (472)
T 3hmu_A 364 EALTDHPLVGEAKIVGM-MASIALTPNKASRAKFASEPGTIGYICRERCF-ANNLIMRHVG-------DRMIISPPLVIT 434 (472)
T ss_dssp HGGGGSTTEEEEEEETT-EEEEEECSCGGGTCCBSSCTTHHHHHHHHHHH-HTTBCCEEET-------TEEEECCCTTCC
T ss_pred HHHhcCCCeEEEEecCc-eEEEEEecCccccccccchhHHHHHHHHHHHH-HCCcEEEecC-------CEEEEECCCCCC
Confidence 543 2333444454 55566653211 000 011345777776 5699999862 689999743 69
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Q 044773 234 EDTLKLSMQRLKAFVDSITTTLHNQSNHQSIKN 266 (289)
Q Consensus 234 ~e~l~~~l~~l~~~l~~~~~~~~~~~~~~~~~~ 266 (289)
++++++++++|++++++....+..++..++.+-
T Consensus 435 ~e~i~~~l~~l~~~l~~~~~~~~~~~~~~~~~~ 467 (472)
T 3hmu_A 435 PAEIDEMFVRIRKSLDEAQAEIEKQGLMKSEGH 467 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCBTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 999999999999999998887877777766543
No 148
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.84 E-value=9e-20 Score=165.21 Aligned_cols=200 Identities=15% Similarity=0.166 Sum_probs=132.5
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. . ...+ +.++++.|
T Consensus 148 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~----~~~~------------~~di~~~s 207 (398)
T 2rfv_A 148 PETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQ-Q----PLQL------------GADIVVHS 207 (398)
T ss_dssp TTEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-C----GGGG------------TCSEEEEE
T ss_pred CCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-C----chhh------------CCcEEEEe
Confidence 47899999999999999998 999999999999999999999865332 1 1111 46689999
Q ss_pred CccccCCCCceE-EEEEecCHHHHHHHHhcc-cc--CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRV-GAIYSNDDTVVAAATKMS-SF--GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 90 ~sK~~g~~G~r~-G~i~~~~~~~~~~~~~~~-~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 165 (289)
+||.++.+|.|+ ||++++++.+.+.+.... .+ ...+++.+.++...++.. ..++++ +.++.+.+.+.|+
T Consensus 208 ~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~----~~~~~~~l~~~l~ 280 (398)
T 2rfv_A 208 VTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL---GIRMER----HCENALKIARFLE 280 (398)
T ss_dssp TTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH---HHHHHH----HHHHHHHHHHHHH
T ss_pred CcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH---HHHHHH----HHHHHHHHHHHHH
Confidence 999998899998 999997655543443322 22 346778888888888753 333333 4445555566665
Q ss_pred hc---------------CCceec----CCceEEEEEecCccccCCChhhHHHHHHHHHHhc---CeEEeCCCCCCC----
Q 044773 166 KA---------------GISCLK----SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDV---KLNISPGSSCHC---- 219 (289)
Q Consensus 166 ~~---------------g~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~---gi~v~pg~~f~~---- 219 (289)
+. ++++.. ..++++ +++++.. ......++++. |+.+.+|..|+.
T Consensus 281 ~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~-~~~~~~~---------~~~~~~l~~~~~~~~i~~~~G~~~~li~~~ 350 (398)
T 2rfv_A 281 GHPSITRVYYPGLSSHPQYELGQRQMSLPGGII-SFEIAGG---------LEAGRRMINSVELCLLAVSLGDTETLIQHP 350 (398)
T ss_dssp TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEE-EEEETTH---------HHHHHHHHTTCSSSEECSCCSSSSCEEECH
T ss_pred cCCCeeEEECCCCCCCccHHHHHhhCCCCceEE-EEEEcCC---------HHHHHHHHHhCCcceeccCCCCcceeeecc
Confidence 43 122222 235544 4577632 01223343333 788888866420
Q ss_pred -----------------CCCCeEEEEEec-CCHHHHHHHHHHHHH
Q 044773 220 -----------------TEPGWFRVCFAN-MSEDTLKLSMQRLKA 246 (289)
Q Consensus 220 -----------------~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 246 (289)
..++++||+++. +++++++.+.+.|++
T Consensus 351 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 351 ASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp HHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 126899999976 456667666666654
No 149
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.84 E-value=3.2e-20 Score=168.60 Aligned_cols=209 Identities=12% Similarity=0.056 Sum_probs=148.6
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++. +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+. +....++..+
T Consensus 158 l~~~i~--~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~------------ 216 (416)
T 1qz9_A 158 LPQAID--QDTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQA------------ 216 (416)
T ss_dssp HHHHCS--TTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHH------------
T ss_pred HHHHhC--CCceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc----cCcCCChhhc------------
Confidence 344444 47899999999999999999 89999999999999999999973 2222233222
Q ss_pred CceEEEecCccccCCCCceE-EEEEecCHHHHHHHHhc-------------------------cccCCCChHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRV-GAIYSNDDTVVAAATKM-------------------------SSFGLVSSQTQYLLSAL 135 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~-G~i~~~~~~~~~~~~~~-------------------------~~~~~~~~~~q~~~~~~ 135 (289)
+.++++.|++|.++ +|.++ ||++++++.+ +.+... ...++.+...+.++..+
T Consensus 217 ~~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~-~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 294 (416)
T 1qz9_A 217 GADYAIGCTYKYLN-GGPGSQAFVWVSPQLC-DLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECG 294 (416)
T ss_dssp TCSEEEECSSSTTC-CCTTCCCEEEECTTTT-TTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHH
T ss_pred CCCEEEecCcccCC-CCCCCeEEEEECHHHH-hccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHH
Confidence 34588999999985 66777 9999976543 222111 01223455666666555
Q ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCC----ceEEEEEecCccccCCChhhHHHHHHHHHHhc
Q 044773 136 LSDKKFAQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSN----AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDV 207 (289)
Q Consensus 136 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~ 207 (289)
++... ...+++.+++++++++++.+.|.+. |+++..+. .+.++|+++++ ..++...|. ++
T Consensus 295 l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~l~-~~ 362 (416)
T 1qz9_A 295 LDVFA--QTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE---------GYAVIQALI-DR 362 (416)
T ss_dssp HHHHT--TSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT---------HHHHHHHHH-TT
T ss_pred HHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC---------HHHHHHHHH-hC
Confidence 54321 1235777888899999999999886 78877664 24567888763 135777776 66
Q ss_pred CeEEeCCCCCCCCCCCeEEEEEe--cCCHHHHHHHHHHHHHHHHHH
Q 044773 208 KLNISPGSSCHCTEPGWFRVCFA--NMSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 208 gi~v~pg~~f~~~~~~~~Ris~~--~~~~e~l~~~l~~l~~~l~~~ 251 (289)
||.+... .++++||+++ .++++++++++++|++++++.
T Consensus 363 gi~~~~~------~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 363 GVIGDYR------EPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp TEECEEE------TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CcEeccC------CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 9987531 3578999997 469999999999999998764
No 150
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.84 E-value=1.6e-19 Score=160.27 Aligned_cols=205 Identities=12% Similarity=0.159 Sum_probs=138.8
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCcc--CCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVF--SSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
++++|++++||| ||.+++.+++++|+++|+++|+++|+|++|..+.. .+... ....+ ..+..+++.
T Consensus 141 ~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~----------~~~~d~~~~ 208 (356)
T 1v72_A 141 QPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSP-AEMTW----------KAGVDALSF 208 (356)
T ss_dssp EEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCT-TTTTG----------GGTCCEEEE
T ss_pred CceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCH-HHhhh----------hhcCCEEEE
Confidence 689999999987 99999999999999999999999999999974321 12211 11111 012224566
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhcc-ccCC--C-ChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKMS-SFGL--V-SSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGL 164 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~-~~~~--~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 164 (289)
|+||. |. ....||++++++.+ +.+.... ..+. . +......+...+.+..+ .+..++++++++++.+.|
T Consensus 209 s~sK~-g~-~~G~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~l~~~L 280 (356)
T 1v72_A 209 GATKN-GV-LAAEAIVLFNTSLA-TEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLW-----LRNARKANAAAQRLAQGL 280 (356)
T ss_dssp CCGGG-TC-SSCEEEEESSGGGH-HHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHH-----HHHHHHHHHHHHHHHHHH
T ss_pred ecccC-CC-cCccEEEEECHHHH-hhHHHHhhccCchhhhHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHH
Confidence 99998 53 23345888855443 3332221 1111 1 22333334455655322 334566788889999999
Q ss_pred Hhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHHHH
Q 044773 165 EKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQ 242 (289)
Q Consensus 165 ~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~ 242 (289)
+++ |+++..+.+++++|++++. ++...|. ++||.+.||. |+ ++++||++.. +++++++++++
T Consensus 281 ~~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~l~-~~gi~v~~g~-~~---~~~iRi~~~~~~~~~~i~~~~~ 344 (356)
T 1v72_A 281 EGLGGVEVLGGTEANILFCRLDS-----------AMIDALL-KAGFGFYHDR-WG---PNVVRFVTSFATTAEDVDHLLN 344 (356)
T ss_dssp TTCTTEEEESCCCSSEEEEEECH-----------HHHHHHH-HTTCBCBCSS-SS---TTEEEEECCTTCCHHHHHHHHH
T ss_pred hhCCCcEEccCCCccEEEEEcCH-----------HHHHHHH-hcCeEEeccc-cC---CCeEEEEecCCCCHHHHHHHHH
Confidence 886 8887777788889988752 4677765 6699999987 54 6799999854 68999999999
Q ss_pred HHHHHHHHH
Q 044773 243 RLKAFVDSI 251 (289)
Q Consensus 243 ~l~~~l~~~ 251 (289)
+|++++++.
T Consensus 345 ~l~~~l~~~ 353 (356)
T 1v72_A 345 QVRLAADRT 353 (356)
T ss_dssp HHHHTC---
T ss_pred HHHHHHHhh
Confidence 999876543
No 151
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.84 E-value=1.7e-20 Score=173.21 Aligned_cols=216 Identities=13% Similarity=0.104 Sum_probs=144.7
Q ss_pred hHHHhhhC-CCccEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQKRH-LKVKGVLVTN-PSNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~-p~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
+++++.++ +++++|++++ ++||+|.++ +.+++++|.++|+++|+++|+||+|.+++.+|..+ . .+...
T Consensus 223 le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a-~~~~~------- 293 (457)
T 3tfu_A 223 FEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-A-ADHAG------- 293 (457)
T ss_dssp HHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-T-HHHHT-------
T ss_pred HHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-H-hHhcC-------
Confidence 45556543 3567777776 689999776 78889999999999999999999999876655432 2 12211
Q ss_pred CCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHh-------ccccCCCChHHHHHHHHHhCCchHHHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATK-------MSSFGLVSSQTQYLLSALLSDKKFAQNYISENK 150 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 150 (289)
....+.||||.++ +| +|+||++++ +.+.+.+.. ....+..|++.+.++.+.|+... + +...
T Consensus 294 ----~~pdiit~sK~l~-gG~~~lG~v~~~-~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~---~--~~~~ 362 (457)
T 3tfu_A 294 ----VSPDIMCVGKALT-GGYLSLAATLCT-ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLL---G--QDWR 362 (457)
T ss_dssp ----CCCSEEEECGGGG-TTSSCCEEEEEE-HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHH---T--SCHH
T ss_pred ----CCceEEEEChhhh-CCCcceEEEEEc-HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHh---h--hHHH
Confidence 1111339999998 56 799999995 455555531 11233478888888777776321 1 1234
Q ss_pred HHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEE
Q 044773 151 KRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 226 (289)
Q Consensus 151 ~~~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~R 226 (289)
++++++.+++.+.|+++ ++....+. |.++++++.+..+ ..++...|+ ++||.+.|.. +++|
T Consensus 363 ~~~~~~~~~l~~~L~~l~~~~~v~~vr~~-G~~~~i~l~~~~~------~~~~~~~l~-~~Gv~v~~~~-------~~lR 427 (457)
T 3tfu_A 363 TRITELAAGLTAGLDTARALPAVTDVRVC-GAIGVIECDRPVD------LAVATPAAL-DRGVWLRPFR-------NLVY 427 (457)
T ss_dssp HHHHHHHHHHHHHHGGGGGSTTEEEEEEC-SSCEEEEESSCCC------HHHHHHHHH-HTTEECCCBT-------TEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeeeecC-CeEEEEEECCccc------HHHHHHHHH-HCCeEEEecC-------CEEE
Confidence 45555666666666654 23333344 4567778765322 246777777 5599998742 5899
Q ss_pred EEEec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 227 VCFAN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 227 is~~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
|+++. .+++++++++++|++++++..
T Consensus 428 i~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 428 AMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 99754 699999999999999987643
No 152
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.83 E-value=1.1e-19 Score=167.93 Aligned_cols=208 Identities=12% Similarity=0.074 Sum_probs=136.4
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|+++|+++|+++|+|++|... ..... .+ .+.++++.|
T Consensus 216 ~~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g----~~~~~-~~------------~~~div~~S 275 (464)
T 1ibj_A 216 PQTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSP----VLSRP-LE------------LGADIVMHS 275 (464)
T ss_dssp SSEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCT----TTCCG-GG------------TTCSEEEEE
T ss_pred cCceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCccc----ccCCh-hh------------cCCEEEEEC
Confidence 57999999999999999997 999999999999999999999742 11111 11 256799999
Q ss_pred CccccCCC-CceEEEEEecCHHHHHHHHhccc-c-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHH-----
Q 044773 90 LSKDLGLP-GFRVGAIYSNDDTVVAAATKMSS-F-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLV----- 161 (289)
Q Consensus 90 ~sK~~g~~-G~r~G~i~~~~~~~~~~~~~~~~-~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~----- 161 (289)
+||+++.+ |+|+||++++++.+.+.+..... . ...+++.+.++.+.++... ..+++.........+++.
T Consensus 276 ~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~---~r~~~~~~~~~~l~~~l~~~~~v 352 (464)
T 1ibj_A 276 ATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_dssp TTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHTCTTC
T ss_pred CcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHH---HHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999744 89999999987666655554432 2 2367788888877877532 112222222222222222
Q ss_pred -----HHHHhc-CCceecCC---ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCC------------CCCC-
Q 044773 162 -----SGLEKA-GISCLKSN---AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGS------------SCHC- 219 (289)
Q Consensus 162 -----~~l~~~-g~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~------------~f~~- 219 (289)
+.|+++ ++++..++ .|.++++++.. ......+...| +..||.+.+|. .++.
T Consensus 353 ~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~------~~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~ 425 (464)
T 1ibj_A 353 KKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS------VALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIP 425 (464)
T ss_dssp CEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC------HHHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCC
T ss_pred eEEECCCCCCCcchHHHhccCCCCceEEEEEECC------HHHHHHHHHhc-CcceEeecCCCCceeeecccccccccCC
Confidence 223332 34444443 23466677742 11123355554 35788888885 2221
Q ss_pred --------CCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 220 --------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 220 --------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
..++++||+++. |++++++++|++++++
T Consensus 426 ~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 426 AEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKT 461 (464)
T ss_dssp SSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHS
T ss_pred HHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHhh
Confidence 125789999995 8999999999998764
No 153
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.83 E-value=2.1e-20 Score=170.97 Aligned_cols=223 Identities=13% Similarity=0.052 Sum_probs=138.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCc-cC-CCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLG-TT-MSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG-~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++..+++..++++++|+||+| .+ .+++.+++|.++|+++|+++|+||+|.++ ..+.. ...+...
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~--~~~~~~~-------- 258 (429)
T 4e77_A 190 VRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA--GAQDYYH-------- 258 (429)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT--CHHHHTT--------
T ss_pred HHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc--hHHHhcC--------
Confidence 566666653344557778866554 33 34567999999999999999999999987 44432 2222211
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-----ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-----MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
....+.||||.+| +|+|+||++++ +.+.+.+.. ....+..|++.+.++.++++.... ++..++.++..+
T Consensus 259 ---~~pdi~t~sK~~~-~G~~~G~~~~~-~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~ 332 (429)
T 4e77_A 259 ---VIPDLTCLGKIIG-GGMPVGAFGGR-REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ-VGVYETLTELTD 332 (429)
T ss_dssp ---CCCSEEEEEGGGG-TTSCCEEEEEC-HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS-TTHHHHHHHHHH
T ss_pred ---CCCCeeeeccccc-CCCCeEEEEEC-HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHH
Confidence 1122459999999 89999999995 455544432 122334788888887777762211 122233333333
Q ss_pred HHHHHHHHHHHhcCCceecCCceEEEEEecCccccCCC--------hhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEE
Q 044773 155 QRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLSSNT--------FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 226 (289)
Q Consensus 155 ~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~--------~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~R 226 (289)
..++.|.+.+.+.++....+..|.++++.+........ .....+++..|+ ++||.+.|+.. ..+|
T Consensus 333 ~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~------~~~~ 405 (429)
T 4e77_A 333 SLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSAF------EAGF 405 (429)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSSTT------SCEE
T ss_pred HHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecCC------CCEE
Confidence 33333444444445544444456788888875311111 112245777776 55999998742 2467
Q ss_pred EEEecCCHHHHHHHHHHHHHHHH
Q 044773 227 VCFANMSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 227 is~~~~~~e~l~~~l~~l~~~l~ 249 (289)
+++. .+++++++++++|+++++
T Consensus 406 ~~~~-~t~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 406 MSLA-HSNEDIQKTVNAARRCFA 427 (429)
T ss_dssp CCTT-CCHHHHHHHHHHHHHHHT
T ss_pred Eecc-CCHHHHHHHHHHHHHHHH
Confidence 6655 699999999999998875
No 154
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.83 E-value=2.2e-20 Score=170.99 Aligned_cols=220 Identities=15% Similarity=0.140 Sum_probs=141.6
Q ss_pred hHHHhhhC-CCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQKRH-LKVKGVLVTNP-SNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p-~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
++++++++ +++++ ++++| +||||.++ +.+++++|.++|+++|+++|+||+|+++ ..+.. ...+..
T Consensus 193 le~~l~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~--~~~~~~-------- 260 (434)
T 2epj_A 193 LERVFAEYGDRIAG-VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE--GAQGYF-------- 260 (434)
T ss_dssp HHHHHHHHGGGEEE-EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT--HHHHHH--------
T ss_pred HHHHHHhCCCCEEE-EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc--hhhHHh--------
Confidence 45556542 24555 55566 67899866 7999999999999999999999999976 33321 111221
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-c----cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-M----SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRL 153 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 153 (289)
+....+.||||.+| +|+|+||+++++ .+.+.+.. . ...+..|++.+.++.++++.. ++ .+..+++
T Consensus 261 ---~~~~di~s~sK~l~-~G~~~G~v~~~~-~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~---~~--~~~~~~~ 330 (434)
T 2epj_A 261 ---NIEGDIIVLGKIIG-GGFPVGAVAGSR-EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKAL---EE--EPVYSVS 330 (434)
T ss_dssp ---TCCCSEEEEEGGGG-TTSSCEEEEECH-HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHH---HH--SCHHHHH
T ss_pred ---CCCCCeeeecchhc-CCcceeeeeecH-HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHH---Hh--cCHHHHH
Confidence 11122459999999 599999999964 44444333 1 122336778887777776532 11 2344556
Q ss_pred HHHHHHHHHHHHhc----CCceecCCceEEEEEecCcc-ccC------CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 044773 154 KQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHL-LSS------NTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 222 (289)
Q Consensus 154 ~~~~~~l~~~l~~~----g~~~~~~~~g~~~~i~~~~~-~~~------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 222 (289)
+++.+++.+.|+++ ++....+..|.++|+.++.. ... .......++...|+ ++||.+.|+..
T Consensus 331 ~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~------ 403 (434)
T 2epj_A 331 REAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSNL------ 403 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT------
T ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccCC------
Confidence 66666666666553 55432233445778887641 100 00122346777776 66999998742
Q ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHHH
Q 044773 223 GWFRVCFANMSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 223 ~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 251 (289)
.++|+++. ++++++++++++|++++++.
T Consensus 404 ~~~~~~~~-~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 404 EAVFTGLP-HQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp SCEECCTT-CSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecc-CCHHHHHHHHHHHHHHHHHH
Confidence 24677654 69999999999999998765
No 155
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.83 E-value=3.7e-20 Score=169.38 Aligned_cols=218 Identities=13% Similarity=0.117 Sum_probs=140.0
Q ss_pred hHHHhhhCCCccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p-~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++..+++...+++++| +|++|.+. +++++++|.++|++||+++|+||+|.++ ..+... ..+..
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~--~~~~~--------- 257 (429)
T 3k28_A 190 VKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC--GQGYY--------- 257 (429)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH--HHHHH---------
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch--HHHHh---------
Confidence 4556654433334455666 55555544 6888999999999999999999999987 544321 11221
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-----ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-----MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
+....+.||||++| +|+|+||++++ +.+.+.+.. ....+..|++.+.++.++++... ++..+.++
T Consensus 258 --~~~~di~t~sK~~~-~G~~iG~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~------~~~~~~~~ 327 (429)
T 3k28_A 258 --GVTPDLTCLGKVIG-GGLPVGAYGGK-AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT------PESYVEFE 327 (429)
T ss_dssp --TCCCSEEEECGGGG-TTSCCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC------HHHHHHHH
T ss_pred --CCCCceehhhhhhc-CCCCeEEEEEc-HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH------HHHHHHHH
Confidence 12223568999998 69999999995 445444432 12233478899998888887642 34455566
Q ss_pred HHHHHHHHHHHhc----CC-ceecCCceEEEEEecCccccC-------CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 044773 155 QRHRKLVSGLEKA----GI-SCLKSNAGLFCWVDMRHLLSS-------NTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 222 (289)
Q Consensus 155 ~~~~~l~~~l~~~----g~-~~~~~~~g~~~~i~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 222 (289)
++++++.+.|++. +. ....+.+ .++++.+...... .......+++..++ ++||.+.|+. .
T Consensus 328 ~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~ 399 (429)
T 3k28_A 328 RKAEMLEAGLRKAAEKHGIPHHINRAG-SMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVFLPPSQ------F 399 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST------T
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEeec-cEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeEEecCC------C
Confidence 6666666666553 32 2333444 4555665432110 11122345777776 6699999863 3
Q ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 223 GWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 223 ~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
+.+|+++. .+++++++++++|++++++
T Consensus 400 ~~~r~~~~-~t~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 400 EGLFLSTV-HSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp SCBCCCTT-CCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECC-CCHHHHHHHHHHHHHHHHH
Confidence 46888775 5999999999999998865
No 156
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.83 E-value=2.7e-20 Score=165.73 Aligned_cols=200 Identities=14% Similarity=0.129 Sum_probs=139.5
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
++++|+|++++|+||||.+++ ++. +++|+++|+|++|+... ...++.+ . ++++.
T Consensus 139 ~~~~k~v~~~~~~nptG~~~~--~i~------~~~~~~li~D~a~~~~~----~~~~~~~------------~--di~~~ 192 (360)
T 1w23_A 139 NENDAYLHITSNNTIYGTQYQ--NFP------EINHAPLIADMSSDILS----RPLKVNQ------------F--GMIYA 192 (360)
T ss_dssp CTTEEEEEEESEETTTTEECS--SCC------CCCSSCEEEECTTTTTS----SCCCGGG------------C--SEEEE
T ss_pred CCCCCEEEEeCCCCCcceecc--ccc------ccCCceEEEechhhcCC----CCcCccc------------C--CEEEE
Confidence 457999999999999999987 332 37999999999998532 1112211 1 37899
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhc--------------cccCCCChHHHHHHHHHhCCchHHHH-HHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKM--------------SSFGLVSSQTQYLLSALLSDKKFAQN-YISENKKRL 153 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--------------~~~~~~~~~~q~~~~~~l~~~~~~~~-~~~~~~~~~ 153 (289)
|+||.+|.+| +||++++++.+ +.+... ..++..+...+.++..+++... +. .+++.++++
T Consensus 193 s~sK~~~~~G--~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~ 267 (360)
T 1w23_A 193 GAQKNLGPSG--VTVVIVKKDLL-NTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIK--DLGGAEAIAKQN 267 (360)
T ss_dssp ETTTTTSCTT--CEEEEEEHHHH-CSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHH
T ss_pred EcccccCCCC--cEEEEEcHHHH-hhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHH--HhcCHHHHHHHH
Confidence 9999998666 89999965443 322211 1113345566666666665321 11 467888999
Q ss_pred HHHHHHHHHHHHhcC-C-cee-cC--CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 044773 154 KQRHRKLVSGLEKAG-I-SCL-KS--NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVC 228 (289)
Q Consensus 154 ~~~~~~l~~~l~~~g-~-~~~-~~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris 228 (289)
+++++++.+.|++++ + ... .+ .+++++|++++.. .+..++...|. ++||.+.||..+ ++++||+
T Consensus 268 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~-~~gi~~~~~~~~----~~~iRis 336 (360)
T 1w23_A 268 EEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------ELNQQFLAKAK-EQGFVGLNGHRS----VGGCRAS 336 (360)
T ss_dssp HHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH------HHHHHHHHHHH-HTTEESCBCCTT----TCSEEEE
T ss_pred HHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC------ccHHHHHHHHH-HCCeeeecCCCC----CCeEEEE
Confidence 999999999999875 4 433 13 3466888888642 12245666654 679999988754 4689999
Q ss_pred Eec-CCHHHHHHHHHHHHHHHHH
Q 044773 229 FAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 229 ~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
++. ++++++++++++|++++++
T Consensus 337 ~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 337 IYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHHHHhh
Confidence 974 5899999999999988764
No 157
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.83 E-value=6e-20 Score=170.38 Aligned_cols=226 Identities=11% Similarity=0.072 Sum_probs=148.5
Q ss_pred hHHHhhhC--CCccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQKRH--LKVKGVLVTNPSNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~--~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
+++++... .++++|+++.++|++|. +++++++++|.++|+++|+++|+||+|.++++.|..+ ...+...
T Consensus 210 le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~------- 281 (476)
T 3i5t_A 210 FEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFG------- 281 (476)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTC-------
T ss_pred HHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccC-------
Confidence 34455431 24566666655788885 8899999999999999999999999999886666432 2110211
Q ss_pred CCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc---------cccCCCChHHHHHHHHHhCCchHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM---------SSFGLVSSQTQYLLSALLSDKKFAQNYISE 148 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~---------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 148 (289)
. ...+.+|||++| .| +|+|+++++ +.+.+.+... ...+..|++.+.++.++|+... + +.
T Consensus 282 -v---~pdi~t~sK~l~-~G~~plg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~---~--~~ 350 (476)
T 3i5t_A 282 -V---VPDIITFAKGVT-SGYVPLGGLAIS-EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELME---R--EG 350 (476)
T ss_dssp -C---CCSEEEECGGGG-TTSSCCEEEEEC-HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHH---H--TT
T ss_pred -C---Ccchhhhhhhhc-CCCcCeEEEEEC-HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHH---h--HH
Confidence 1 111447899998 69 999999995 5555555432 1234478888888888876432 1 33
Q ss_pred HHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecCccccC-CChh----hHHHHHHHHHHhcCeEEeCCCCCCC
Q 044773 149 NKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLSS-NTFE----AEMELWKKIVYDVKLNISPGSSCHC 219 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~~~~i~~~~~~~~-~~~~----~~~~~~~~ll~~~gi~v~pg~~f~~ 219 (289)
..+.++++.+++.+.|++++ +....+.| .++++++...... ..+. ...+++..++ +.||.+.|..
T Consensus 351 ~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g---- 424 (476)
T 3i5t_A 351 IVDQAREMADYFAAALASLRDLPGVAETRSVG-LVGCVQCLLDPTRADGTAEDKAFTLKIDERCF-ELGLIVRPLG---- 424 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSTTEEEEEEET-TEEEEEECCC-----CCHHHHHHHHHHHHHHH-HTTEECEEET----
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC-ceeEEEEecCccccccccchhHHHHHHHHHHH-HCCCEEEecC----
Confidence 45566666677777776541 23334444 4556776543111 1110 1345667776 5699999831
Q ss_pred CCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHHhh
Q 044773 220 TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTTL 255 (289)
Q Consensus 220 ~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~~ 255 (289)
+++||++.. .+++++++++++|++++++....+
T Consensus 425 ---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~~ 458 (476)
T 3i5t_A 425 ---DLCVISPPLIISRAQIDEMVAIMRQAITEVSAAH 458 (476)
T ss_dssp ---TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 689999743 699999999999999999877644
No 158
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.83 E-value=7.7e-20 Score=168.13 Aligned_cols=219 Identities=12% Similarity=0.083 Sum_probs=144.8
Q ss_pred hHHHhhhC--CCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhcccccc
Q 044773 2 YQLAQKRH--LKVKGVLVTNP-SNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~~~--~~~~~i~l~~p-~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (289)
+++++++. +++++ ++++| +||||. +.+++++++|.++|+++|+++|+||+|.++.+.+..+ ..+...
T Consensus 208 le~~l~~~~~~~~~~-vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~--~~~~~~------ 278 (449)
T 3a8u_X 208 LLKLIELHDASNIAA-VFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMF--GADSFG------ 278 (449)
T ss_dssp HHHHHHHHCGGGEEE-EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS--HHHHHT------
T ss_pred HHHHHHhcCCCCEEE-EEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcch--hhhhcC------
Confidence 34555532 24555 56667 578996 6679999999999999999999999998775544321 112211
Q ss_pred CCCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc-----------cccCCCChHHHHHHHHHhCCchHHHHH
Q 044773 78 TEVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM-----------SSFGLVSSQTQYLLSALLSDKKFAQNY 145 (289)
Q Consensus 78 ~d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~-----------~~~~~~~~~~q~~~~~~l~~~~~~~~~ 145 (289)
.... +.||||.++ +| +|+||+++++ .+.+.+... ...+..|++.+.++.++++.. .+
T Consensus 279 --~~~d---i~s~sK~l~-~G~~~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~---~~- 347 (449)
T 3a8u_X 279 --VTPD---LMCIAKQVT-NGAIPMGAVIAST-EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLL---QK- 347 (449)
T ss_dssp --CCCS---EEEECGGGG-TTSSCCEEEEEEH-HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHH---HH-
T ss_pred --CCCC---EEEEccccc-CCCCceEEEEECH-HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHH---Hh-
Confidence 1111 338999998 68 9999999964 555555432 112336778887777777632 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC-Ccee--cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 044773 146 ISENKKRLKQRHRKLVSGLEKAG-ISCL--KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 222 (289)
Q Consensus 146 ~~~~~~~~~~~~~~l~~~l~~~g-~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 222 (289)
....++++++.+++.+.|++++ +... .+..|.++|++++....... .+..++...|+ ++||.+.|+.
T Consensus 348 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~-~~~~~~~~~l~-~~Gv~v~~~g------- 417 (449)
T 3a8u_X 348 -ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAI-VRPFEAGMALW-KAGFYVRFGG------- 417 (449)
T ss_dssp -TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSS-HHHHHHHHHHH-HHTEECEEET-------
T ss_pred -cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCccccc-ccHHHHHHHHH-HCCcEEecCC-------
Confidence 2345667777778888887642 3221 12345688888875321100 02235777777 5599999861
Q ss_pred CeEEEEEe-cCCHHHHHHHHHHHHHHHHH
Q 044773 223 GWFRVCFA-NMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 223 ~~~Ris~~-~~~~e~l~~~l~~l~~~l~~ 250 (289)
+++||+++ ..+++++++++++|++++++
T Consensus 418 ~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 418 DTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 68999975 37999999999999998865
No 159
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.83 E-value=1.6e-19 Score=160.31 Aligned_cols=207 Identities=19% Similarity=0.148 Sum_probs=139.8
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCc-cChhhhhhccccccCCCCCceEEEec
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGF-VSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
++++|++++| ||||.+++.+++++|+++|+++|+++|+||+|.++.++..+. .....+ .....++..|
T Consensus 145 ~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~----------~~~~d~~~~s 213 (359)
T 1svv_A 145 IPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADI----------ARLTDMFYIG 213 (359)
T ss_dssp EEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHH----------HHHCSEEEEE
T ss_pred CceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhh----------hhcCCEEEEe
Confidence 4899999999 799999999999999999999999999999995432221111 111111 0123477889
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhc---ccc-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKM---SSF-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~---~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 165 (289)
.+|..+ + ..+|+++++++.+ +.+... ... ...+......+..+++... .++.+++++++++++.+.|+
T Consensus 214 ~~K~g~-~-~~~g~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~l~~~L~ 285 (359)
T 1svv_A 214 ATKAGG-M-FGEALIILNDALK-PNARHLIKQRGALMAKGWLLGIQFEVLMKDNL-----FFELGAHSNKMAAILKAGLE 285 (359)
T ss_dssp CTTTTC-S-SCEEEEECSGGGC-TTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCC-C-CceEEEEEcccHH-HHHHHHHhcCCcccccchhhHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHhc
Confidence 999743 3 5689999865443 222221 111 1123333333455566532 36677888999999999995
Q ss_pred hcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHHHHHH
Q 044773 166 KAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRL 244 (289)
Q Consensus 166 ~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l 244 (289)
..|+++..+.+++++|++++ .++...|++++||.+.+.. ...++++||+++. ++++++++++++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l 351 (359)
T 1svv_A 286 ACGIRLAWPSASNQLFPILE-----------NTMIAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVL 351 (359)
T ss_dssp HTTCCBSSCCSSSEECBEEE-----------HHHHHHHTTTEECEEEEEE---TTTEEEEEEECCTTCCHHHHHHHHHHH
T ss_pred cCCeEEccCCccceEEEEcC-----------HHHHHHHHHhcCEEEEecc---cCCCceEEEEccCcCCHHHHHHHHHHH
Confidence 44888887888889988765 2477777766699983211 1235789999854 6999999999999
Q ss_pred HHHHHH
Q 044773 245 KAFVDS 250 (289)
Q Consensus 245 ~~~l~~ 250 (289)
++++++
T Consensus 352 ~~~~~~ 357 (359)
T 1svv_A 352 KRLVAS 357 (359)
T ss_dssp HHC---
T ss_pred HHHHhc
Confidence 988764
No 160
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.83 E-value=3.8e-19 Score=161.42 Aligned_cols=218 Identities=11% Similarity=0.060 Sum_probs=143.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++..+ ++++|++++|+||+ ..+ +++|.++|+++|+++|+||+|............. ..
T Consensus 161 l~~~i~~~-~~~~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~-------------~~ 221 (420)
T 3gbx_A 161 MAKLAKEH-KPKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNP-------------VP 221 (420)
T ss_dssp HHHHHHHH-CCSEEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCS-------------TT
T ss_pred HHHHHHhc-CCeEEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCcc-------------cc
Confidence 45556543 58999999999974 555 8999999999999999999986432221111111 11
Q ss_pred CceEEEecCccccCCCCceEEEEEecC--HHHHHHHHhcc-c--cCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSND--DTVVAAATKMS-S--FGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQR 156 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~--~~~~~~~~~~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 156 (289)
..+++++|+||+++ |.+.||+++++ +.+.+.+.... . .+..+...+.+++.++... +.+++++.+++++++
T Consensus 222 ~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~ 297 (420)
T 3gbx_A 222 HAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEA--MEPEFKVYQQQVAKN 297 (420)
T ss_dssp TSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHH
T ss_pred cCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHH--HhHhHHHHHHHHHHH
Confidence 24488999999994 33349999976 35555444321 1 1223334444444333221 134567888889999
Q ss_pred HHHHHHHHHhcCCceecC-CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC-------CCCCCCCCCCeEEEE
Q 044773 157 HRKLVSGLEKAGISCLKS-NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP-------GSSCHCTEPGWFRVC 228 (289)
Q Consensus 157 ~~~l~~~l~~~g~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-------g~~f~~~~~~~~Ris 228 (289)
++++.+.|.+.|+++..+ ..++++|+.++..... .+.+...++++||.+.| +..|+ +..+||+
T Consensus 298 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gi~v~~~~~~~~~~~~~~---~~~iRi~ 368 (420)
T 3gbx_A 298 AKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLT------GKEADAALGRANITVNKNSVPNDPKSPFV---TSGIRIG 368 (420)
T ss_dssp HHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCC------HHHHHHHHHHTTEECEEECCTTCSSCTTT---CSEEEEE
T ss_pred HHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCCC------HHHHHHHHHHCCcEeccccCCCCccccCC---CcceEEe
Confidence 999999999888887653 4567788887642211 12344455688999998 33333 3459999
Q ss_pred Eec-----CCHHHHHHHHHHHHHHHHHH
Q 044773 229 FAN-----MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 229 ~~~-----~~~e~l~~~l~~l~~~l~~~ 251 (289)
++. .+++++++++++|++++++.
T Consensus 369 ~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 369 SPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred cchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 953 34789999999999888664
No 161
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.82 E-value=7.3e-20 Score=163.37 Aligned_cols=199 Identities=15% Similarity=0.120 Sum_probs=142.5
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
++++|+|++++|+||||.+++ ++++| +|+++++|++|+.. ....++. +.++++.
T Consensus 140 ~~~t~~v~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~----~~~~~~~--------------~~d~~~~ 193 (362)
T 2c0r_A 140 QDNAAYLHLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDIL----SRPFDLN--------------QFGLVYA 193 (362)
T ss_dssp CTTEEEEEEESEETTTTEECS--SCCCC------TTSCEEEECTTTTT----SSCCCGG--------------GCSEEEE
T ss_pred CCCcCEEEEeCCcCccceecc--ccccc------CCCEEEEEChhhcc----CCccchh--------------HCcEEEE
Confidence 567999999999999999755 35555 89999999999843 1112211 1247888
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHh--------------ccccCCCChHHHHHHHHHhCCchHHHH--HHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATK--------------MSSFGLVSSQTQYLLSALLSDKKFAQN--YISENKKR 152 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~--------------~~~~~~~~~~~q~~~~~~l~~~~~~~~--~~~~~~~~ 152 (289)
|+||++|.+| +||++++++.+ +.+.. ....++.+.+.+.++..+++.. .+ .+++.+++
T Consensus 194 s~~K~~g~~G--~G~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~---~~~~~~~~~~~~ 267 (362)
T 2c0r_A 194 GAQKNLGPSG--VTVVIVREDLV-AESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWI---EERGGLEGVQQA 267 (362)
T ss_dssp ETTTTTCCSS--CEEEEEEGGGS-SSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHH---HHTTHHHHHHHH
T ss_pred eccccccCcC--cEEEEEcHHHH-hhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHH---HHhCCHHHHHHH
Confidence 9999999778 99999976543 21111 1122446778888888887642 22 47888899
Q ss_pred HHHHHHHHHHHHHhcC-C-ceecC---CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 044773 153 LKQRHRKLVSGLEKAG-I-SCLKS---NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 227 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g-~-~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ri 227 (289)
++++++++.+.|+++| + ++..+ .++.++++.++... +..+++..|. +.||.+.||..+ .+++||
T Consensus 268 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~-~~gi~~~~g~~~----~~~iRi 336 (362)
T 2c0r_A 268 NRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEE------LEKEFVKASE-QEGFVGLKGHRS----VGGLRA 336 (362)
T ss_dssp HHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHH------HHHHHHHHHH-HTTEESCBCCTT----TCSEEE
T ss_pred HHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcc------hHHHHHHHHH-HCCCeeccCCCC----CCEEEE
Confidence 9999999999999886 6 65422 23345677776421 2345777664 679999888765 357999
Q ss_pred EEec-CCHHHHHHHHHHHHHHHHH
Q 044773 228 CFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 228 s~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
|++. +++++++++++.|++++++
T Consensus 337 s~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 337 SIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHh
Confidence 9975 6899999999999988764
No 162
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.82 E-value=9e-20 Score=166.50 Aligned_cols=216 Identities=16% Similarity=0.133 Sum_probs=138.1
Q ss_pred hHHHhhhCCCccEEEEeCCCCC-CccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNP-LGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NP-tG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++.+.++...+++++|+|+ ||.++ +++++++|.++ ++||+++|+||+|.++ ..+.. ...+...
T Consensus 189 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~--~~~~~~~-------- 256 (424)
T 2e7u_A 189 LREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG--GATELLG-------- 256 (424)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT--HHHHHHT--------
T ss_pred HHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh--HHHHHhC--------
Confidence 4555553212234466778654 89755 79999999999 9999999999999976 43331 1122211
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-c----cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-M----SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
....+.||||++| +|+|+||+++++ .+.+.+.. . ...+..|++.+.++.++++.. .+ ..+..++++
T Consensus 257 ---~~~di~s~sK~l~-~G~~~G~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~---~~-~~~~~~~~~ 327 (424)
T 2e7u_A 257 ---LKPDLVTLGKILG-GGLPAAAYAGRR-EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELL---EE-NPGYYAYLE 327 (424)
T ss_dssp ---CCCSEEEECGGGG-TTSSCEEEEECH-HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHH---HH-CTHHHHHHH
T ss_pred ---CCcchhhhhhhhh-CCcceEEEEEcH-HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHH---Hh-ccHHHHHHH
Confidence 1111449999999 699999999964 45444433 1 122346778888877777632 11 134556666
Q ss_pred HHHHHHHHHHHhc----CCce-ecCCceEEEEEecCccc-cC------CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 044773 155 QRHRKLVSGLEKA----GISC-LKSNAGLFCWVDMRHLL-SS------NTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 222 (289)
Q Consensus 155 ~~~~~l~~~l~~~----g~~~-~~~~~g~~~~i~~~~~~-~~------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 222 (289)
++.+++.+.|++. ++.. ..+. |.++|++++... .. .......++...|+ ++||.+.|+..
T Consensus 328 ~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~------ 399 (424)
T 2e7u_A 328 DLGARLEAGLKEVLKEKGLPHTVNRV-GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNF------ 399 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSS------
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEee-ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCC------
Confidence 6666777766653 5532 3344 457888886410 00 00122346777777 67999998752
Q ss_pred CeEEEEEecCCHHHHHHHHHHHHHH
Q 044773 223 GWFRVCFANMSEDTLKLSMQRLKAF 247 (289)
Q Consensus 223 ~~~Ris~~~~~~e~l~~~l~~l~~~ 247 (289)
..+|+++. .+++++++++++|+++
T Consensus 400 ~~~~~~~~-~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 400 EAAFLSVA-HREEDVEKTLEALRKA 423 (424)
T ss_dssp SCEECCTT-CCHHHHHHHHHHHHHH
T ss_pred CceEeecc-CCHHHHHHHHHHHHHh
Confidence 24677754 6999999999999875
No 163
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.81 E-value=2.1e-19 Score=165.89 Aligned_cols=231 Identities=16% Similarity=0.230 Sum_probs=146.2
Q ss_pred hHHHhhhC--CCccEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEecCCCC----------CccCCCCccChhh
Q 044773 2 YQLAQKRH--LKVKGVLVTNPSNPL-GTTMSRNELNLLVNFITEKNIHLISDEIYSG----------TVFSSPGFVSIME 68 (289)
Q Consensus 2 l~~~~~~~--~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~----------~~~~~~~~~~~~~ 68 (289)
+++++..+ +++++|++++|+||+ |.+++.+++++|.++|++||+++|+|+++.. ..+.+. +...
T Consensus 172 Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~---~~~~ 248 (467)
T 2oqx_A 172 LERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDW---TIEQ 248 (467)
T ss_dssp HHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTS---CHHH
T ss_pred HHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCc---cHHH
Confidence 45666542 368999999999998 9999999999999999999999999977653 122222 3333
Q ss_pred hhhccccccCCCCCceEEEecCccccCCC-CceEEEEEecCH---HHHHHHHhc----cc---cCCCChHHHHHHHHHhC
Q 044773 69 ILKDRNCENTEVWNRVHIVYSLSKDLGLP-GFRVGAIYSNDD---TVVAAATKM----SS---FGLVSSQTQYLLSALLS 137 (289)
Q Consensus 69 ~~~~~~~~~~d~~~~~i~i~s~sK~~g~~-G~r~G~i~~~~~---~~~~~~~~~----~~---~~~~~~~~q~~~~~~l~ 137 (289)
+..+. + +..+ +++.|+||.+|++ | ||++++++ .....+... .. +...+.....++...+.
T Consensus 249 ~~~~~-~---~~~d--~~~~s~sK~~g~~~G---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~ 319 (467)
T 2oqx_A 249 ITRET-Y---KYAD--MLAMSAKKDAMVPMG---GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY 319 (467)
T ss_dssp HHHHH-G---GGCS--EEEEESSSTTCCSSC---EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH
T ss_pred Hhhhh-h---ccCC--eEEEecccccCCCCc---eEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhH
Confidence 21000 0 0112 4578999999877 6 88888766 222222221 11 11112222222222111
Q ss_pred CchHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecCc---cccCCChhhHHHHHHHHHHhcCeEEeC
Q 044773 138 DKKFAQNYIS-ENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRH---LLSSNTFEAEMELWKKIVYDVKLNISP 213 (289)
Q Consensus 138 ~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~ll~~~gi~v~p 213 (289)
.+++ +..+..+++.+++.+.|++.|+++. +.+++++|++++. ..+...+ +..+++..|+.++||.+.|
T Consensus 320 ------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~ 391 (467)
T 2oqx_A 320 ------DGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPADQF-PAQALACELYKVAGIRAVE 391 (467)
T ss_dssp ------HTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSCGGGC-HHHHHHHHHHHHHCEECEE
T ss_pred ------hhhhHHHHHHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCCcccc-cHHHHHHHHHHhcCceecc
Confidence 1111 2334456778888999988788877 7788899998853 1111111 1345677775678999998
Q ss_pred CCCC--CC---------CCCCeEEEEEec--CCHHHHHHHHHHHHHHHHHHH
Q 044773 214 GSSC--HC---------TEPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 214 g~~f--~~---------~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~ 252 (289)
+..| +. ...+++||+++. ++++++++++++|++++++..
T Consensus 392 ~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 392 IGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp ESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 5532 11 123799999973 589999999999999987643
No 164
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.81 E-value=4e-18 Score=153.63 Aligned_cols=206 Identities=17% Similarity=0.133 Sum_probs=132.8
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++. +++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+. . +. . .
T Consensus 130 l~~~i~--~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~---~~-~------------~ 187 (386)
T 1cs1_A 130 LRAALA--EKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ-N---PL-A------------L 187 (386)
T ss_dssp HHHHHH--TCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-C---GG-G------------G
T ss_pred HHHhhc--cCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-C---cc-c------------c
Confidence 445554 46899999999999999998 899999999999999999999875432 1 11 1 2
Q ss_pred CceEEEecCccccCCCCceE-EEEEecCHHHHHHHHhccc-c-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRV-GAIYSNDDTVVAAATKMSS-F-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~-G~i~~~~~~~~~~~~~~~~-~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
+.++++.|+||.++.+|.|+ ||++++++.+.+.+..... + ...+++.+.++...++. +....+.+.++.+
T Consensus 188 ~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~ 260 (386)
T 1cs1_A 188 GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LVPRMELAQRNAQ 260 (386)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-------HHHHHHHHHHHHH
T ss_pred CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-------HHHHHHHHHHHHH
Confidence 56789999999998889887 9999977555554443322 2 33566776666555543 2334445666677
Q ss_pred HHHHHHHhcC-Ccee------------------cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC-
Q 044773 159 KLVSGLEKAG-ISCL------------------KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH- 218 (289)
Q Consensus 159 ~l~~~l~~~g-~~~~------------------~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~- 218 (289)
.+.+.|++++ +... ...+++ +.+.+... . ..+.. .+++.||.+.+++ +|
T Consensus 261 ~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~------~~~~~-~l~~~gi~~~~~~-~g~ 329 (386)
T 1cs1_A 261 AIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAM-LSFELDGD--E------QTLRR-FLGGLSLFTLAES-LGG 329 (386)
T ss_dssp HHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE-EEEEESSC--H------HHHHH-HHHTCSSSEEBSC-CCS
T ss_pred HHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceE-EEEEECCC--H------HHHHH-HHHhCCcceEccc-CCC
Confidence 7777776642 1111 112444 44555431 1 22444 4567899887431 22
Q ss_pred ------------------------CCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 219 ------------------------CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 219 ------------------------~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
...++++||+++. ++.++.++++.+++++
T Consensus 330 ~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~ 382 (386)
T 1cs1_A 330 VESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRA 382 (386)
T ss_dssp SSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred cceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHH
Confidence 0125799999985 4455555555555544
No 165
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.81 E-value=6.9e-19 Score=161.91 Aligned_cols=220 Identities=12% Similarity=0.093 Sum_probs=142.8
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCC-CccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSG-TVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++... ++++|++++|+||++. ++++|.++|+++|+++|+|++|.. +.+.+.....+ +
T Consensus 177 l~~~i~~~-~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~----~--------- 237 (447)
T 3h7f_A 177 VRATALEF-RPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV----P--------- 237 (447)
T ss_dssp HHHHHHHH-CCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST----T---------
T ss_pred HHHHHHhc-CCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC----C---------
Confidence 44555443 6789999999999876 499999999999999999999853 22333221111 1
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc-ccc--CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM-SSF--GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~-~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
..++++.|+||+++ |.|.||++++++. .+.+... ..+ +..+.....+++.++.... ..++++..+.+.+++
T Consensus 238 -~~di~~~s~sK~l~--G~~gG~i~~~~~~-~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~--~~~~~~~~~~~~~~~ 311 (447)
T 3h7f_A 238 -HADVVSTTVHKTLG--GGRSGLIVGKQQY-AKAINSAVFPGQQGGPLMHVIAGKAVALKIAA--TPEFADRQRRTLSGA 311 (447)
T ss_dssp -TCSEEEEESSGGGC--CCSCEEEEECGGG-HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTT--SHHHHHHHHHHHHHH
T ss_pred -CCcEEEecCCcCCC--CCCeEEEEECHHH-HHHHhhhcCCcccCCccHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHH
Confidence 22377999999984 6788999996544 3333322 222 2223333444444443211 334677888899999
Q ss_pred HHHHHHHHhc-----CCceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe----CCCCCCCCCCCeEEE
Q 044773 158 RKLVSGLEKA-----GISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS----PGSSCHCTEPGWFRV 227 (289)
Q Consensus 158 ~~l~~~l~~~-----g~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~~~~~~~Ri 227 (289)
+++.+.|.+. |+++.. +..++++|+++...... .+.+..+++++||.+. |+..+++..+.++||
T Consensus 312 ~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRi 385 (447)
T 3h7f_A 312 RIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLD------GQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRI 385 (447)
T ss_dssp HHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCC------HHHHHHHHHHTTEECBC-------------CEEEE
T ss_pred HHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCC------HHHHHHHHHHCCeEEecccCCCCCCCCCCCCceec
Confidence 9999999887 888764 34566788887643211 2355566778899998 664334444678999
Q ss_pred EEec-----CCHHHHHHHHHHHHHHHHHHH
Q 044773 228 CFAN-----MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 228 s~~~-----~~~e~l~~~l~~l~~~l~~~~ 252 (289)
++.. .++++++++++.|.+++.+..
T Consensus 386 g~~~~~~~~~~~eei~~~~~~l~~~l~~~~ 415 (447)
T 3h7f_A 386 GTPALATRGFGDTEFTEVADIIATALATGS 415 (447)
T ss_dssp ECHHHHHHTCCHHHHHHHHHHHHHHHHSGG
T ss_pred cCHHHhhCCCCHHHHHHHHHHHHHHHhccC
Confidence 9843 468999999999999887653
No 166
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.81 E-value=1.9e-18 Score=156.15 Aligned_cols=219 Identities=12% Similarity=0.119 Sum_probs=146.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++... ++++|++ +|+|+ |...+ +++|.++|+++|+++|+|++|....... .... ..+ .
T Consensus 155 l~~~i~~~-~~~~v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~~~-~~~-~---------- 215 (405)
T 2vi8_A 155 VREKARLH-RPKLIVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAA-GLHP-NPV-P---------- 215 (405)
T ss_dssp HHHHHHHH-CCSEEEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHT-TSSC-CST-T----------
T ss_pred HHHHHHhc-CCeEEEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEcccccccccc-CcCC-Ccc-c----------
Confidence 34555532 5788776 56554 44445 8999999999999999999998422211 1111 111 1
Q ss_pred CceEEEecCccccC-CCCceEEEEEecCHHHHHHHHhcc-cc--CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLG-LPGFRVGAIYSNDDTVVAAATKMS-SF--GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 82 ~~~i~i~s~sK~~g-~~G~r~G~i~~~~~~~~~~~~~~~-~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
..++++.|+||.++ ..| ||++++ +.+.+.+.... .+ +..++....++..+++... ..++++.++++++++
T Consensus 216 ~~di~~~s~sK~~~g~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~ 289 (405)
T 2vi8_A 216 YAHFVTTTTHKTLRGPRG---GMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEAL--QDDFKAYAKRVVDNA 289 (405)
T ss_dssp TCSEEEEESSSTTCCCSC---EEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHH
T ss_pred cCCEEEEeccccCCCCCC---eEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHH
Confidence 22388999999997 556 999996 45555444332 22 2223444444445554321 245678888999999
Q ss_pred HHHHHHHHhcCCceecC-CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCC----CCCCCCCeEEEEEec-
Q 044773 158 RKLVSGLEKAGISCLKS-NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSS----CHCTEPGWFRVCFAN- 231 (289)
Q Consensus 158 ~~l~~~l~~~g~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~----f~~~~~~~~Ris~~~- 231 (289)
+++.+.|++.|+++..+ .+++++|+.++... .+..++...| .++||.+.||.. ++...++++||+++.
T Consensus 290 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~ 363 (405)
T 2vi8_A 290 KRLASALQNEGFTLVSGGTDNHLLLVDLRPQQ-----LTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAV 363 (405)
T ss_dssp HHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT-----CCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHH
T ss_pred HHHHHHHHhCCCeEecCCCCceEEEEEccCCC-----CCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeee
Confidence 99999999888888765 45788899887421 1123466655 577999999863 333345789999973
Q ss_pred ----CCHHHHHHHHHHHHHHHHHH
Q 044773 232 ----MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 232 ----~~~e~l~~~l~~l~~~l~~~ 251 (289)
++++++++++++|++++++.
T Consensus 364 ~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 364 TTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred eecCCCHHHHHHHHHHHHHHHhcc
Confidence 57999999999999987644
No 167
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.81 E-value=1.7e-18 Score=155.91 Aligned_cols=219 Identities=11% Similarity=0.098 Sum_probs=152.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++... ++++|++++++||||.+++.+++++|.++|+++|+++|+|++++ . + ....+..+
T Consensus 127 l~~~i~~~-~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~~~~~------------ 188 (379)
T 3ke3_A 127 AVAKIKED-KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLDMKEL------------ 188 (379)
T ss_dssp HHHHHHHH-TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCCHHHH------------
T ss_pred HHHHHhhc-CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-cccccccc------------
Confidence 34555432 68899999999999999999999999999999999999999986 2 2 22233322
Q ss_pred CceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc--cc---------------------c-CCCChHHHHHHHHHhC
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM--SS---------------------F-GLVSSQTQYLLSALLS 137 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--~~---------------------~-~~~~~~~q~~~~~~l~ 137 (289)
+.++++.|++|.++ .+..+|+++++++. .+.+... .+ + ++.+.....++..+++
T Consensus 189 ~~d~~~~s~~K~l~-~~~g~g~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~ 266 (379)
T 3ke3_A 189 GIDVLISAPQKGWS-STPCAGLVMLSAAA-IKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAIL 266 (379)
T ss_dssp TCSEEEECTTTTTC-SCCCEEEEEECHHH-HHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEecchhhcC-CCCceEEEEECHHH-HHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHH
Confidence 45688999999997 44458999996544 3333220 00 1 2345566666666665
Q ss_pred CchHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCCc---eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC
Q 044773 138 DKKFAQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSNA---GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP 213 (289)
Q Consensus 138 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p 213 (289)
.. .+. +++..++++++++++.+.|+++|+++..+.+ +....+..+.. ....... +.++||.+.+
T Consensus 267 ~~---~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~--------~~~~~~~-L~~~Gi~v~~ 334 (379)
T 3ke3_A 267 EA---KEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTERD--------DMHKGSA-FAEAGLQIAA 334 (379)
T ss_dssp HH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSCH--------HHHSSHH-HHHTTCCCEE
T ss_pred HH---HHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCCc--------chHHHHH-HHHCCeEEeC
Confidence 32 333 6778888999999999999998888765542 22232333211 1112333 4577999999
Q ss_pred CCCCCC---CCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 214 GSSCHC---TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 214 g~~f~~---~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
|..+.. ...+.+||++.. ++++++++++++|++++++..
T Consensus 335 g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 335 GVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp CCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 987643 236799999953 689999999999999987654
No 168
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.81 E-value=2e-20 Score=168.96 Aligned_cols=207 Identities=11% Similarity=0.028 Sum_probs=127.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.. ....++. .. .++++.|
T Consensus 158 ~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~----~~~~~~~------------~~-~d~~~~s 217 (400)
T 3vax_A 158 PDTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYG----KVPGDLT------------TP-IDMISIS 217 (400)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTT----TSGGGGG------------SC-CSEEEEE
T ss_pred CCceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcC----CCCcChh------------hc-CcEEEEe
Confidence 46899999999999999999 899999999999999999999832 1111111 11 4588999
Q ss_pred CccccCCCCceEEEEE-ecCHHH-------HHHHH-----hccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIY-SNDDTV-------VAAAT-----KMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQR 156 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~-~~~~~~-------~~~~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 156 (289)
+||.+|.+| +|+++ ++++.+ ..... .....+..+...+.++..+++. +.+++++.+++++++
T Consensus 218 ~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~ 292 (400)
T 3vax_A 218 GHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI---FEAEHAQWQVAAQDL 292 (400)
T ss_dssp TGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHSHHHHHHHHHHH
T ss_pred HHHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH---HHhhHHHHHHHHHHH
Confidence 999777555 67777 755211 11110 0111233455666666666653 244578889999999
Q ss_pred HHHHHHHHHhcCCceecCCc---eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-------------
Q 044773 157 HRKLVSGLEKAGISCLKSNA---GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT------------- 220 (289)
Q Consensus 157 ~~~l~~~l~~~g~~~~~~~~---g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~------------- 220 (289)
++++.+.|+..|+++..+.+ +.++++.++.. +..++...|. +||.+.+|..|...
T Consensus 293 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~--~gi~v~~g~~~~~~~~~~~~~~~~~g~ 363 (400)
T 3vax_A 293 RSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDV-------DAEAFLVTLK--DLVAVATGSASTSASFTPSHVLRAMGL 363 (400)
T ss_dssp HHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHH--HHHHHTTTTEEEEEEECCHHHHHTTTC
T ss_pred HHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHh--cCcEEEecccccCCCCCccHHHHHcCC
Confidence 99999999833788777664 23555666531 1245666665 69999998765431
Q ss_pred -C---CCeEEEEE-ec-CCHHHHHHHHHHHHHHHHH
Q 044773 221 -E---PGWFRVCF-AN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 221 -~---~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
. ++++||++ +. .+++++++++++|++++++
T Consensus 364 ~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 364 PEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp CHHHHTSEEEEEEEEC--------------------
T ss_pred CccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 1 48999999 64 5789999999999988754
No 169
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.81 E-value=2.6e-18 Score=155.87 Aligned_cols=220 Identities=10% Similarity=0.027 Sum_probs=147.5
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCC-CccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSG-TVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++.+. ++++|++++|+| |.+++ +++|.++|+++|+++|+|++|.. ..+.+..... .
T Consensus 156 l~~~i~~~-~~~~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~--------------~ 215 (417)
T 3n0l_A 156 VREIAKKE-KPKLIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSP--------------F 215 (417)
T ss_dssp HHHHHHHH-CCSEEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCC--------------T
T ss_pred HHHHHHhc-CCeEEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCc--------------c
Confidence 45555533 689999888886 78888 99999999999999999999752 2232222111 1
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcccc---CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
...+++++|+||.+ +|.|.||++++++.+.+.+...... +..+...+.++..++... +.+.+++.++++++++
T Consensus 216 ~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~ 291 (417)
T 3n0l_A 216 PYAHVVSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFN--LSDEWKVYAKQVRTNA 291 (417)
T ss_dssp TTCSEEEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHH
T ss_pred ccceEEEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHH
Confidence 13458899999988 6677899999766666655543222 223344444544444321 1344677888889999
Q ss_pred HHHHHHHHhcCCceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC----CCCCeEEEEEec-
Q 044773 158 RKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC----TEPGWFRVCFAN- 231 (289)
Q Consensus 158 ~~l~~~l~~~g~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~~~Ris~~~- 231 (289)
+++.+.|.+.|+++.. +..+.++|+.+...... . +.+..+++++||.+.++..+.. .....+|+++..
T Consensus 292 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~ 365 (417)
T 3n0l_A 292 QVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFS-----G-KDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPAL 365 (417)
T ss_dssp HHHHHHHHHTTCEEGGGSCSSSEEEEECTTSSSC-----H-HHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHH
T ss_pred HHHHHHHHhCCceeccCCCCceEEEEEcccCCCC-----H-HHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHH
Confidence 9999999988887665 23456777887642111 1 2344455688999987654332 123679999853
Q ss_pred ----CCHHHHHHHHHHHHHHHHHH
Q 044773 232 ----MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 232 ----~~~e~l~~~l~~l~~~l~~~ 251 (289)
.+++++++++++|+++++..
T Consensus 366 ~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 366 TARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred hhCCCCHHHHHHHHHHHHHHHhcc
Confidence 35799999999999998754
No 170
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.81 E-value=3.1e-19 Score=164.31 Aligned_cols=210 Identities=13% Similarity=0.110 Sum_probs=142.8
Q ss_pred hHHHhhhC-CCccEEEEeCC-CCCCc-cCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQKRH-LKVKGVLVTNP-SNPLG-TTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p-~NPtG-~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
+++++.++ +++++|+ ++| +||+| .+++++++++|.++|+++|+++|+||+|+++++.|.. ... +...
T Consensus 221 le~~i~~~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~-~~~-~~~~------- 290 (449)
T 2cjg_A 221 ARAAFETRPHDIACFV-AEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTA-WAY-QQLD------- 290 (449)
T ss_dssp HHHHHHHSTTTEEEEE-ECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-STH-HHHT-------
T ss_pred HHHHHHhcCCceEEEE-EeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcc-eee-cccC-------
Confidence 55666542 4566655 556 79999 5999999999999999999999999999987665542 122 2211
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEecCHHHHHH-----HHh--ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAA-----ATK--MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKK 151 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~-----~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 151 (289)
.. ..+.||||.+ |+||++++++ +.+. ... ....+..|++.+.++.++++... + .+..+
T Consensus 291 -~~---~di~t~sK~l-----~iG~~~~~~~-~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~---~--~~~~~ 355 (449)
T 2cjg_A 291 -VA---PDIVAFGKKT-----QVCGVMAGRR-VDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIE---A--EGLFE 355 (449)
T ss_dssp -CC---CSEEEECGGG-----SSEEEEECGG-GGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHH---H--HTHHH
T ss_pred -CC---ceEEEecCcc-----cEEEEEECHH-HhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHH---h--ccHHH
Confidence 11 1134799998 6899999654 4432 111 11233467888888888876321 1 23456
Q ss_pred HHHHHHHHHHHHHHhc----C--CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeE
Q 044773 152 RLKQRHRKLVSGLEKA----G--ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWF 225 (289)
Q Consensus 152 ~~~~~~~~l~~~l~~~----g--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~ 225 (289)
+++++.+++.+.|+++ . +....+.|. +++++++.. .+..+++..|+ ++||.+.|+. .+++
T Consensus 356 ~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~-~~~~~~~~~------~~~~~~~~~l~-~~Gv~v~~~g------~~~i 421 (449)
T 2cjg_A 356 RAVQHGKYLRARLDELAADFPAVVLDPRGRGL-MCAFSLPTT------ADRDELIRQLW-QRAVIVLPAG------ADTV 421 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTTSEEEEEETT-EEEEECSSH------HHHHHHHHHHH-HTTEECEEET------TTEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeEeeccE-EEEEEECCh------HHHHHHHHHHH-HCCeEEecCC------CCEE
Confidence 6677777777777653 2 334455554 555787642 12346888887 5799999862 4799
Q ss_pred EEEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 226 RVCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 226 Ris~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
||+++. ++++++++++++|++++++
T Consensus 422 Ri~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 422 RFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 998753 6999999999999998865
No 171
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.81 E-value=6.1e-19 Score=155.47 Aligned_cols=199 Identities=16% Similarity=0.157 Sum_probs=128.4
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITE-KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~-~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|++++|+||||.+++ +++|.++|++ +|+++|+|++|....+. . ++ + .+.++++.
T Consensus 82 ~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~-~---~~-~------------~~~d~~~~ 141 (331)
T 1pff_A 82 PNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT-N---PL-D------------LGVDIVVH 141 (331)
T ss_dssp TTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC-C---GG-G------------GTCSEEEE
T ss_pred CCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC-C---hh-h------------cCCcEEEE
Confidence 47899999999999999998 9999999999 99999999999854331 1 11 1 25679999
Q ss_pred cCccccCCCCce-EEEEEecCHHHHHHHHhcccc---CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFR-VGAIYSNDDTVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGL 164 (289)
Q Consensus 89 s~sK~~g~~G~r-~G~i~~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 164 (289)
|+||.+|.+|.| .||++++++.+.+.+...... ...+++.+.++...++. .....+...++.+.+.+.+
T Consensus 142 s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~l 214 (331)
T 1pff_A 142 SATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-------LDMRVKRAAENAQKVAEFL 214 (331)
T ss_dssp ETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
T ss_pred ECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-------HHHHHHHHHHHHHHHHHHH
Confidence 999999989999 799999653666666554333 23566666665555442 1222233334444444444
Q ss_pred Hhc---------------CCceec----CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC-------
Q 044773 165 EKA---------------GISCLK----SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH------- 218 (289)
Q Consensus 165 ~~~---------------g~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~------- 218 (289)
++. ++++.. ..++ ++.+.+.. .+....++++.||.+++++.-+
T Consensus 215 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~ 283 (331)
T 1pff_A 215 HEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGS-MIAFDVDG----------LEKAKKVLDNCHVVSLAVSLGGPESLIQH 283 (331)
T ss_dssp HHCTTCCCEECTTSTTSTTHHHHHHHCSSCCS-EEEEECSS----------HHHHHHHHHTCSSSEECSSCCSSSCEEEC
T ss_pred HcCCCeeEEECCCCCCCccHHHHHhhCCCCce-EEEEEECC----------HHHHHHHHHhCCCceeccCCCCcceeeec
Confidence 332 122211 1233 44566541 1233445568899887653211
Q ss_pred -----------------CCCCCeEEEEEec-CCHHHHHHHHHHHHH
Q 044773 219 -----------------CTEPGWFRVCFAN-MSEDTLKLSMQRLKA 246 (289)
Q Consensus 219 -----------------~~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 246 (289)
...++++||+++. +++++++.+++.|++
T Consensus 284 ~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 284 PASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp HHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred chhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 0125799999976 577788888877764
No 172
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.81 E-value=2.7e-19 Score=164.78 Aligned_cols=219 Identities=11% Similarity=0.075 Sum_probs=136.8
Q ss_pred hHHHhhhC-CCccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQKRH-LKVKGVLVTNP-SNPLGTT-MSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p-~NPtG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
+++++.++ +++++ ++++| +||||.+ .+++++++|.++|++||+++|+||+|.++ +.+.. ...+...
T Consensus 191 le~~l~~~~~~~~~-vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~--~~~~~~~------- 259 (453)
T 2cy8_A 191 MREVFANHGSDIAA-FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH--GMQALLD------- 259 (453)
T ss_dssp HHHHHHHHGGGEEE-EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT--HHHHHHT-------
T ss_pred HHHHHHhcCCCEEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch--hhhHHhC-------
Confidence 45555543 24555 55666 5789975 47999999999999999999999999976 44431 1111211
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-------ccccCCCChHHHHHHHHHhCC-chHHHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-------MSSFGLVSSQTQYLLSALLSD-KKFAQNYISENK 150 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~ 150 (289)
....+.||||+++ +|+|+||+++++ .+.+.+.. ....+..|++.+.++.++++. . . .+..
T Consensus 260 ----~~~di~s~sK~l~-~G~~~G~v~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~-----~~~~ 327 (453)
T 2cy8_A 260 ----VQPDLTCLAKASA-GGLPGGILGGRE-DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E-----DDVC 327 (453)
T ss_dssp ----CCCSEEEEEGGGG-TTSSCEEEEECH-HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H-----TTHH
T ss_pred ----CCCcEEEEChhhh-CCcceEEEechH-HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h-----hhHH
Confidence 1112448999998 699999999964 44443332 112234778888877776654 2 1 2233
Q ss_pred HHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecCc-----c-----cc---CCChhhHHHHHHHHHHhcCeEEeC
Q 044773 151 KRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRH-----L-----LS---SNTFEAEMELWKKIVYDVKLNISP 213 (289)
Q Consensus 151 ~~~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~i~~~~-----~-----~~---~~~~~~~~~~~~~ll~~~gi~v~p 213 (289)
++++++.+++.+.|++. ++....+..|.++|++++. . .. ........+++..|+ ++||.+.|
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~ 406 (453)
T 2cy8_A 328 AKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGG 406 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBT
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeC
Confidence 44555555555555443 4433223334577888874 1 00 001122346777777 56999965
Q ss_pred CCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Q 044773 214 GSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 214 g~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+ +.+|+++. .+++++++++++|++++++...
T Consensus 407 ~--------~~~~l~~~-~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 407 R--------GSVFLSAQ-HEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp T--------TEEECCTT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred C--------CCEEeecc-CCHHHHHHHHHHHHHHHHHHHh
Confidence 3 24677644 6999999999999999887643
No 173
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.80 E-value=4.3e-19 Score=163.93 Aligned_cols=213 Identities=9% Similarity=-0.006 Sum_probs=147.6
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++.++ +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+. +.....+.++
T Consensus 204 l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~----g~~~~~~~~~----------- 265 (465)
T 3e9k_A 204 ILEVIEKEGDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV----GNVELYLHDW----------- 265 (465)
T ss_dssp HHHHHHHHGGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHH-----------
T ss_pred HHHHHHhcCCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCchhhc-----------
Confidence 44555533 57899999999999999999 89999999999999999999984 3333333333
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc--------------------------ccCCCChHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS--------------------------SFGLVSSQTQYLLSA 134 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~--------------------------~~~~~~~~~q~~~~~ 134 (289)
+.+++++|++|.++.+..++|+++++++.+........ ..++.+.+...++.+
T Consensus 266 -~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~a 344 (465)
T 3e9k_A 266 -GVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHA 344 (465)
T ss_dssp -TCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHH
T ss_pred -CCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHH
Confidence 55688999999993223378999986544321110000 011344455555555
Q ss_pred HhCCchHHHHH-HHHHHHHHHHHHHHHHHHHHh-----------cCCceecCC----ceEEEEEecCccccCCChhhHHH
Q 044773 135 LLSDKKFAQNY-ISENKKRLKQRHRKLVSGLEK-----------AGISCLKSN----AGLFCWVDMRHLLSSNTFEAEME 198 (289)
Q Consensus 135 ~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~-----------~g~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~ 198 (289)
+++.. .++ +++.+++++++++++.+.|++ .|+++..|. .|.++++.++. +. .+
T Consensus 345 al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~--~~------~~ 413 (465)
T 3e9k_A 345 SLEIF---KQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV--PN------KD 413 (465)
T ss_dssp HHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC--TT------CC
T ss_pred HHHHH---HHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC--CH------HH
Confidence 55532 333 788889999999999999987 477777765 25566777762 21 23
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEE--ecCCHHHHHHHHHHHHHHHHHH
Q 044773 199 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCF--ANMSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 199 ~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~--~~~~~e~l~~~l~~l~~~l~~~ 251 (289)
+...|. ++||.+.. ..++++||++ ..+++++++++++.|++++++.
T Consensus 414 l~~~L~-~~Gi~v~~------~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 414 VFQELE-KRGVVCDK------RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp HHHHHH-TTTEECEE------ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHH-HCCEEEec------CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 667666 56999873 2357999998 3379999999999999988654
No 174
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.80 E-value=1.8e-18 Score=157.16 Aligned_cols=109 Identities=17% Similarity=0.240 Sum_probs=83.4
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKN-IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~-~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|++++|+||||.+++ +++|+++|+++| +++|+|++|....+. . ++ ..+.++++.
T Consensus 150 ~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~-~---~~-------------~~~~div~~ 209 (403)
T 3cog_A 150 PETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ-R---PL-------------ALGADISMY 209 (403)
T ss_dssp TTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC-C---TT-------------TTTCSEEEE
T ss_pred cCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC-C---cc-------------ccCCeEEEE
Confidence 47899999999999999998 999999999999 999999999875331 1 11 124669999
Q ss_pred cCccccCCCC-ceEEEEEecCHHHHHHHHhccc-c-CCCChHHHHHHHHHhCC
Q 044773 89 SLSKDLGLPG-FRVGAIYSNDDTVVAAATKMSS-F-GLVSSQTQYLLSALLSD 138 (289)
Q Consensus 89 s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~~~-~-~~~~~~~q~~~~~~l~~ 138 (289)
|+||.++.+| .++||++++++.+.+.+..... + ...+++.+.++...++.
T Consensus 210 S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~ 262 (403)
T 3cog_A 210 SATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT 262 (403)
T ss_dssp ETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred cChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH
Confidence 9999998666 5799999976666555543322 2 23567777777777765
No 175
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.80 E-value=4.3e-19 Score=164.53 Aligned_cols=212 Identities=13% Similarity=0.081 Sum_probs=147.9
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++| ||+|.+. +++++|.++|+++|+++|+|++|....+ + ..+...+ +.++++.|
T Consensus 202 ~~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~-g--~~~~~~~------------g~di~~~s 263 (474)
T 1wyu_B 202 PHVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIM-G--WARPGDM------------GFDVVHLN 263 (474)
T ss_dssp TTEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTT-T--TCCHHHH------------TCSEEECC
T ss_pred CCceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhc-c--CCCcccC------------CCcEEEEe
Confidence 46899999998 6899883 3599999999999999999999975433 2 1122222 45688999
Q ss_pred CccccCCC-C---ceEEEEEecCHHHHHHHH-hc--------------------cccCCCChHHHHHHHHHhCCchHHHH
Q 044773 90 LSKDLGLP-G---FRVGAIYSNDDTVVAAAT-KM--------------------SSFGLVSSQTQYLLSALLSDKKFAQN 144 (289)
Q Consensus 90 ~sK~~g~~-G---~r~G~i~~~~~~~~~~~~-~~--------------------~~~~~~~~~~q~~~~~~l~~~~~~~~ 144 (289)
+||+++.| | .|+||++++++.+ +.+. .. ....+.+.+.+.++..++.... .+
T Consensus 264 ~~K~~~~p~g~gG~~~G~~~~~~~l~-~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g--~~ 340 (474)
T 1wyu_B 264 LHKTFTVPHGGGGPGSGPVGVKAHLA-PYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLG--LE 340 (474)
T ss_dssp TTTTTCCCCTTSCCCCCCEEECGGGG-GGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHH--HH
T ss_pred CccccccCCCCCCCCeEEEEEcHHHH-HhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHH--HH
Confidence 99999766 4 6999999976543 3222 10 0111245566666666665422 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEE-EEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 044773 145 YISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF-CWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 223 (289)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~ 223 (289)
.+++..+++.++++++.+.|++.|+++..+...+. .|++++.. .+..+++..|++ +||.+ |+..|+....+
T Consensus 341 ~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~ 412 (474)
T 1wyu_B 341 GLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEG------FRALDLAKGLLE-LGFHP-PTVYFPLIVKE 412 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTT------CCHHHHHHHHHH-TTCCC-CEESCSTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCC------CCHHHHHHHHHH-CCccc-cccccccccCC
Confidence 57888889999999999999988777633332221 45565221 123568888874 59985 66666433467
Q ss_pred eEEEEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 224 WFRVCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 224 ~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
++||+++. ++++++++++++|++++++
T Consensus 413 ~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 413 ALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp CEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred EEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 89999974 5899999999999998876
No 176
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.80 E-value=2.6e-18 Score=159.64 Aligned_cols=218 Identities=14% Similarity=0.144 Sum_probs=148.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCC-CccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSG-TVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++... ++|+|++ +++||+ .+++ +++|.++|+++|+++|+|++|.. +...+....++ +
T Consensus 185 le~~i~~~-~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~----~--------- 245 (483)
T 1rv3_A 185 LEENARLF-HPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF----E--------- 245 (483)
T ss_dssp HHHHHHHH-CCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG----G---------
T ss_pred HHHHHhhc-CCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC----C---------
Confidence 45555533 6899888 899988 8888 99999999999999999999873 22222211111 1
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCH--------------HHHHHHHhc--cc-cCCCChHHHHHHHHHhCCchHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDD--------------TVVAAATKM--SS-FGLVSSQTQYLLSALLSDKKFAQ 143 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~--------------~~~~~~~~~--~~-~~~~~~~~q~~~~~~l~~~~~~~ 143 (289)
..++++.|+||++ .|.|.||++++++ .+...+... .. .++.+.....+++.+++... .
T Consensus 246 -~~div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~--~ 320 (483)
T 1rv3_A 246 -HCHVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAM--T 320 (483)
T ss_dssp -TCSEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHT--S
T ss_pred -CCcEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHh--C
Confidence 2347889999988 4667799999764 233333221 11 22234445555555554321 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCceecCC-ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe----CCCCCC
Q 044773 144 NYISENKKRLKQRHRKLVSGLEKAGISCLKSN-AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS----PGSSCH 218 (289)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~ 218 (289)
..+++..++++++++++.+.|.+.|+++..+. +++++|+++..... +..++ ..++++.||.+. ||..+
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~-----~~~~~-~~~L~~~gI~v~~~~~pg~~~- 393 (483)
T 1rv3_A 321 PEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGT-----DGGRA-EKVLEACSIACNKNTCPGDKS- 393 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTC-----CHHHH-HHHHHHTTEECEEECCSSCSC-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCCC-----CHHHH-HHHHHhCCcEEecCCCCCCCc-
Confidence 34577888899999999999998898877653 34677888864211 11234 445568899999 88742
Q ss_pred CCCCCeEEEEEec-CC----HHHHHHHHHHHHHHHHH
Q 044773 219 CTEPGWFRVCFAN-MS----EDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 219 ~~~~~~~Ris~~~-~~----~e~l~~~l~~l~~~l~~ 250 (289)
+.+++++||+++. ++ ++++++++++|.++++.
T Consensus 394 ~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 394 ALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp TTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 2346799999964 35 89999999999999876
No 177
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.80 E-value=3.9e-18 Score=159.56 Aligned_cols=220 Identities=12% Similarity=0.073 Sum_probs=150.2
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccC-----CCCccChhhhhhccccc
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFS-----SPGFVSIMEILKDRNCE 76 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~-----~~~~~~~~~~~~~~~~~ 76 (289)
+++++. +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.++.+. |.....+. .
T Consensus 232 Le~~i~--~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~-~------- 298 (514)
T 3mad_A 232 MREAIT--PNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD-F------- 298 (514)
T ss_dssp HHHHCC--TTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS-T-------
T ss_pred HHHHhc--cCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc-c-------
Confidence 344444 46899999999999999998 899999999999999999999976431 21111111 1
Q ss_pred cCCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhcc---------c---cCCCChHHHHHHHHHhCCchHHHH
Q 044773 77 NTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMS---------S---FGLVSSQTQYLLSALLSDKKFAQN 144 (289)
Q Consensus 77 ~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~---------~---~~~~~~~~q~~~~~~l~~~~~~~~ 144 (289)
...+.++++.|++|.++ +|.++|+++++++.+........ . .+..+.....++..++.... ..
T Consensus 299 --~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~--~~ 373 (514)
T 3mad_A 299 --RLEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLG--EE 373 (514)
T ss_dssp --TSTTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHH--HH
T ss_pred --cCCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHh--HH
Confidence 13356788999999975 77889999998776544221111 0 11122222233333333211 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 044773 145 YISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 223 (289)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~ 223 (289)
.+++..+++.++++++.+.|++. ++++..+..+ ++++.... . +..++...|. ++||.+ +|..| ++
T Consensus 374 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~-~------~~~~l~~~L~-~~Gi~v-~g~~~----~~ 439 (514)
T 3mad_A 374 GYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDE-L------NIYQVMEEMA-GRGWRL-NGLHR----PP 439 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSS-S------CHHHHHHHHH-TTTCBC-EEETT----TT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCC-C------CHHHHHHHHH-hcCCEe-ccCCC----CC
Confidence 46778888899999999999987 8888776665 55565432 1 2245777776 559988 45444 35
Q ss_pred eEEEEEec--CCHHHHHHHHHHHHHHHHHHHH
Q 044773 224 WFRVCFAN--MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 224 ~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
++|+++.. ++++++++++++|++++++...
T Consensus 440 ~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 440 AFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp EEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 89999963 3669999999999999988765
No 178
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.79 E-value=5.6e-18 Score=153.48 Aligned_cols=200 Identities=15% Similarity=0.151 Sum_probs=129.6
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. . ++ . .+.++++.|
T Consensus 149 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~-~---~~-~------------~~~d~~~~S 208 (398)
T 1gc0_A 149 PATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ-R---PL-E------------LGADLVVHS 208 (398)
T ss_dssp TTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC-C---GG-G------------GTCSEEEEE
T ss_pred CCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccC-C---ch-h------------hCceEEEEC
Confidence 47899999999999999998 999999999999999999999865332 1 11 1 245689999
Q ss_pred CccccCCCCceE-EEEEecCHHHHHHHHhccc--c-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPGFRV-GAIYSNDDTVVAAATKMSS--F-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLE 165 (289)
Q Consensus 90 ~sK~~g~~G~r~-G~i~~~~~~~~~~~~~~~~--~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 165 (289)
+||.+|.+|.|+ ||++++++.+...+..... + +..+++.+.++...++.. ....+...++.+.+.+.|.
T Consensus 209 ~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~l~~~L~ 281 (398)
T 1gc0_A 209 ATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTL-------NLRMDRHCANAQVLAEFLA 281 (398)
T ss_dssp TTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccchH-------HHHHHHHHHHHHHHHHHHh
Confidence 999999899998 9999966555434433222 2 236677777766666542 3334445556666666666
Q ss_pred hcC---------------Cceec----CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC---CCCC------
Q 044773 166 KAG---------------ISCLK----SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP---GSSC------ 217 (289)
Q Consensus 166 ~~g---------------~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p---g~~f------ 217 (289)
+++ +++.. ..++++. +++... .+.+..++++.++.+.. |+..
T Consensus 282 ~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~-~~l~~~---------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~ 351 (398)
T 1gc0_A 282 RQPQVELIHYPGLASFPQYTLARQQMSQPGGMIA-FELKGG---------IGAGRRFMNALQLFSRAVSLGDAESLAQHP 351 (398)
T ss_dssp TCTTEEEEEEC----------------CCTTEEE-EEETTH---------HHHHHHHHHHCSSSEECSCCSCSSCEEECG
T ss_pred cCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEE-EEECCC---------HHHHHHHHHhCCCceeccCCCCcceeeecc
Confidence 531 11221 2344444 455421 12455566788888765 3210
Q ss_pred ------CC---------CCCCeEEEEEec-CCHHHHHHHHHHHHH
Q 044773 218 ------HC---------TEPGWFRVCFAN-MSEDTLKLSMQRLKA 246 (289)
Q Consensus 218 ------~~---------~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 246 (289)
.. ..++.+|||++. +++++++.+.+.|++
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 352 ASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp GGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 00 124799999976 456667776666654
No 179
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.79 E-value=7.6e-19 Score=160.12 Aligned_cols=213 Identities=13% Similarity=0.204 Sum_probs=135.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++++. +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+. . ++ . .
T Consensus 159 l~~ai~--~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~-~---~~-~------------~ 216 (414)
T 3ndn_A 159 WERALS--VPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ-Q---GF-P------------L 216 (414)
T ss_dssp HHHHTS--SCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC-C---CG-G------------G
T ss_pred HHHhcC--CCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC-C---ch-h------------c
Confidence 344443 47899999999999999988 899999999999999999999843221 1 11 1 1
Q ss_pred CceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc-cccC-CCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 82 NRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM-SSFG-LVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~-~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
+.++++.|+||.+|.+| ++.|+++++++.+...+... ..++ ..++....++...++. +..+.+...++++
T Consensus 217 g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~ 289 (414)
T 3ndn_A 217 GVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET-------LAIRVQHSNASAQ 289 (414)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHH
T ss_pred CCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHH
Confidence 44688999999998778 89999999766554344322 2222 2344444333333332 3444555667778
Q ss_pred HHHHHHHhc-CCc-eecCC----------------ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC-
Q 044773 159 KLVSGLEKA-GIS-CLKSN----------------AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC- 219 (289)
Q Consensus 159 ~l~~~l~~~-g~~-~~~~~----------------~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~- 219 (289)
.+.+.|+++ ++. +..|. .|..+++.++..... ...+..++...+ +..++.+.+|..+..
T Consensus 290 ~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~-~~~~~~~~~~~l-~~~~~~~s~G~~~sl~ 367 (414)
T 3ndn_A 290 RIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDV-AKQRAFEVLDKM-RLIDISNNLGDAKSLV 367 (414)
T ss_dssp HHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGG-HHHHHHHHHHHC-SSSEECSCCSCSSCEE
T ss_pred HHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccc-cHHHHHHHHHhC-ccceEcCCCCCCCcee
Confidence 888888776 332 22221 356788888642000 002223455544 355777777765432
Q ss_pred --------------------CCCCeEEEEEecCCHHHHHHHHHHHHHHH
Q 044773 220 --------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 220 --------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 248 (289)
..++.+|||++. |+.+++++.|.+++
T Consensus 368 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al 413 (414)
T 3ndn_A 368 THPATTTHRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL 413 (414)
T ss_dssp ECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred eCccccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 235789999997 55666666666654
No 180
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.79 E-value=1.6e-18 Score=158.21 Aligned_cols=210 Identities=16% Similarity=0.124 Sum_probs=140.6
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC----------CEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKN----------IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~----------~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++|++++|+||||.+++ +++|.++|++++ +++|+|++|... ....++..+
T Consensus 174 ~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~----~~~~~~~~~---------- 236 (432)
T 3a9z_A 174 PTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALG----KRRVDVEDL---------- 236 (432)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTT----TSCCCHHHH----------
T ss_pred CCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhC----CcccChhhc----------
Confidence 46899999999999999999 678899999999 999999999742 222233333
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHH---------hccccCCCChHHHHHHHHHhCCchHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAAT---------KMSSFGLVSSQTQYLLSALLSDKKFAQNYISENK 150 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~---------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 150 (289)
+..+++.|+||.+| .|+||++++++.....+. .....++.+.+.+.++.++++.. .+++++.+
T Consensus 237 --~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~---~~~~~~~~ 308 (432)
T 3a9z_A 237 --GVDFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV---SENCETYE 308 (432)
T ss_dssp --CCSEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH---HHHHHHHH
T ss_pred --CCCEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH---HhhHHHHH
Confidence 22366899999875 459999997654111111 11112345667777776666532 44578888
Q ss_pred HHHHHHHHHHHHHHHhc-CCcee--cC-----CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC--
Q 044773 151 KRLKQRHRKLVSGLEKA-GISCL--KS-----NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-- 220 (289)
Q Consensus 151 ~~~~~~~~~l~~~l~~~-g~~~~--~~-----~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-- 220 (289)
++++++++++.+.|+++ |+++. .+ ..+..+++.+..... +..++...+ .+|.+.+|..|.+.
T Consensus 309 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l---~~i~~~~G~~~~~~~~ 380 (432)
T 3a9z_A 309 AHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL-----RGYMVLAQC---QTLLASVGASCHSDHE 380 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC-----CHHHHHHHC---SSEECBSSCGGGGGGT
T ss_pred HHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-----cHHHHHHHh---cCeEEeccccccCCCC
Confidence 99999999999999885 65443 22 112234444543110 112333332 37877777655321
Q ss_pred ----------------CCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 221 ----------------EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 221 ----------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
..+++||+++. ++++++++++++|++++++..
T Consensus 381 ~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 381 DRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp TSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 13789999975 589999999999999987654
No 181
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.78 E-value=1.1e-17 Score=151.37 Aligned_cols=210 Identities=17% Similarity=0.152 Sum_probs=130.9
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHc----CCEEEEecCCCCCccCCCCccChhhhhhcccccc
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEK----NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~----~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (289)
+++++. +++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|..+.+. ...++
T Consensus 131 l~~~i~--~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~~~~~-------- 192 (393)
T 1n8p_A 131 LPQLIK--ENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----NPLNF-------- 192 (393)
T ss_dssp HHHHSC--SSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----CGGGG--------
T ss_pred HHHhcc--cCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-----CHHHc--------
Confidence 344444 47899999999999999998 99999999999 9999999999876442 11222
Q ss_pred CCCCCceEEEecCccccCCCCceE-EEEEecCHHHHHHHHhccc-cC-CCChHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 044773 78 TEVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDTVVAAATKMSS-FG-LVSSQTQYLLSALLSDKKFAQNYISENKKRLK 154 (289)
Q Consensus 78 ~d~~~~~i~i~s~sK~~g~~G~r~-G~i~~~~~~~~~~~~~~~~-~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (289)
+.++++.|+||.+|.+|+|+ ||++++++.+.+.+..... ++ ..++....++...++. +....+...
T Consensus 193 ----~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-------~~~~~~~~~ 261 (393)
T 1n8p_A 193 ----GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-------LHLRVRQAA 261 (393)
T ss_dssp ----TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-------HHHHHHHHH
T ss_pred ----CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-------HHHHHHHHH
Confidence 46699999999999889999 9999965555555443322 22 2455555555555543 233344455
Q ss_pred HHHHHHHHHHHhcC--Cc-eecC---------------C--c-eEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC
Q 044773 155 QRHRKLVSGLEKAG--IS-CLKS---------------N--A-GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP 213 (289)
Q Consensus 155 ~~~~~l~~~l~~~g--~~-~~~~---------------~--~-g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p 213 (289)
++.+.+.+.|.+.+ +. +..| . . |..+++.++... .+...+...+ +..++.+..
T Consensus 262 ~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~-----~~~~~~l~~l-~~~~~~~s~ 335 (393)
T 1n8p_A 262 LSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA-----EAASKFASST-RLFTLAESL 335 (393)
T ss_dssp HHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH-----HHHHHHHHHC-SSSEECSCC
T ss_pred HHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH-----HHHHHHHhhC-CcceECCCC
Confidence 66666777776652 21 1111 1 1 446777776310 1222333332 233445443
Q ss_pred CC----------CCCC-----------CCCCeEEEEEec-CCHHHHHHHHHHHHH
Q 044773 214 GS----------SCHC-----------TEPGWFRVCFAN-MSEDTLKLSMQRLKA 246 (289)
Q Consensus 214 g~----------~f~~-----------~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 246 (289)
|+ .+.. ..++.+|||++. +++++++.+.++|++
T Consensus 336 G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 336 GGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp CCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 42 1110 124789999986 455666666666654
No 182
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.78 E-value=1.4e-17 Score=150.58 Aligned_cols=208 Identities=17% Similarity=0.149 Sum_probs=135.9
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCC
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWN 82 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 82 (289)
++++. +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|... +.... . ..+
T Consensus 145 ~~~i~--~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~-~~~~~----~------------~~~ 202 (392)
T 3qhx_A 145 RAAIR--PTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASP-ALQQP----L------------SLG 202 (392)
T ss_dssp HHHCC--TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCT-TTCCG----G------------GGT
T ss_pred HHhhC--CCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccc-ccCCh----H------------HhC
Confidence 44444 47999999999999999988 999999999999999999999843 21111 1 124
Q ss_pred ceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhccc-c-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 83 RVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKMSS-F-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 83 ~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~~~-~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
.++++.|+||.+|.+| ++.||++++++.+.+.+..... + ...++..+.++...++.. ....+...++.+.
T Consensus 203 ~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l-------~~~~~~~~~~~~~ 275 (392)
T 3qhx_A 203 ADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTL-------VLRMQRHSENAAA 275 (392)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH-------HHHHHHHHHHHHH
T ss_pred CcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHH-------HHHHHHHHHHHHH
Confidence 5688999999998666 8999999986666655544322 2 336677777777777652 2334455666677
Q ss_pred HHHHHHhc-CCc-eecCC----------------ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC--
Q 044773 160 LVSGLEKA-GIS-CLKSN----------------AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC-- 219 (289)
Q Consensus 160 l~~~l~~~-g~~-~~~~~----------------~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-- 219 (289)
+.+.|+++ .+. +..|. .|..+++.++... .....+...+ +..++.+..|+.++.
T Consensus 276 l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~-----~~~~~~~~~l-~~~~~~~s~G~~~sl~~ 349 (392)
T 3qhx_A 276 VAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR-----TAAEQLCAKT-NIFILAESLGSVESLIE 349 (392)
T ss_dssp HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH-----HHHHHHHHHC-SSSEECSCCCCSSCEEE
T ss_pred HHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH-----HHHHHHHHhC-CCceECCCCCCCCceee
Confidence 77777765 222 21111 1446677776421 1223344443 455777777765431
Q ss_pred ----------------CCCCeEEEEEecCCHHHHHHHHHHHHHHH
Q 044773 220 ----------------TEPGWFRVCFANMSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 220 ----------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 248 (289)
..++.+|||++. ++.++.++.+.+++
T Consensus 350 ~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al 391 (392)
T 3qhx_A 350 HPSAMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL 391 (392)
T ss_dssp CGGGTSCGGGBTTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred CcccccccccCHHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 135789999986 45555555555544
No 183
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.77 E-value=2.4e-17 Score=151.29 Aligned_cols=210 Identities=14% Similarity=0.146 Sum_probs=135.2
Q ss_pred hHHHhhhCCCc-cEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKV-KGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~-~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
++++++. ++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... . .+ . .
T Consensus 192 l~~ai~~--~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~-~---~~-~------------~ 249 (445)
T 1qgn_A 192 LELALNQ--KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN-Q---KA-L------------A 249 (445)
T ss_dssp HHHHHHH--SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT-C---CT-T------------T
T ss_pred HHHHhcc--CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCccccc-C---Cc-c------------c
Confidence 4555553 46 99999999999999998 89999999999999999999985321 1 11 1 1
Q ss_pred CCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc-cccCC-CChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM-SSFGL-VSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~-~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
.+.++++.|+||.+|..| +++||++++++ +.+.+... ..++. .+++....+...++. +..+.+.+.++.
T Consensus 250 ~g~Div~~S~sK~~gg~gd~~~G~l~~~~~-l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a 321 (445)
T 1qgn_A 250 LGADLVLHSATKFLGGHNDVLAGCISGPLK-LVSEIRNLHHILGGALNPNAAYLIIRGMKT-------LHLRVQQQNSTA 321 (445)
T ss_dssp TTCSEEEECTTTTTTCSSSCCCEEEEECHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHH
T ss_pred cCCEEEEECCcccccccccceEEEEEECHH-HHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-------HHHHHHHHHHHH
Confidence 245688999999998554 57999999654 44433332 22332 344444444444432 233344556667
Q ss_pred HHHHHHHHhc-CC-ceecC----------------CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC
Q 044773 158 RKLVSGLEKA-GI-SCLKS----------------NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC 219 (289)
Q Consensus 158 ~~l~~~l~~~-g~-~~~~~----------------~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~ 219 (289)
+.+.+.|+++ ++ .+..| ..|.++++.++... .+...+...+ +..++.+..|..+..
T Consensus 322 ~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~-----~~~~~~l~~l-~~~~i~~s~G~~~sl 395 (445)
T 1qgn_A 322 LRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL-----LTTAKFVDAL-KIPYIAPSFGGCESI 395 (445)
T ss_dssp HHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH-----HHHHHHHHHC-SSSEECSCCCSSSCE
T ss_pred HHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH-----HHHHHHHHhC-CCceEeccCCCCcee
Confidence 8888888876 34 33333 12445667776411 1122333332 234777777766531
Q ss_pred ---------------------CCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Q 044773 220 ---------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 220 ---------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 250 (289)
..++.+|||++. |+++.+++.|+++++.
T Consensus 396 ~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~---Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 396 VDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDS 444 (445)
T ss_dssp EECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred eecccccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 124799999995 6799999999888764
No 184
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.77 E-value=2.9e-17 Score=148.36 Aligned_cols=199 Identities=16% Similarity=0.162 Sum_probs=128.0
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+ +.+ + + .+.++++.|
T Consensus 143 ~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~-~~~---~-~------------~~~di~~~S 202 (389)
T 3acz_A 143 PNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCF-LKP---L-E------------LGADIALHS 202 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CCG---G-G------------TTCSEEEEE
T ss_pred CCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-cCc---c-c------------cCCeEEEEC
Confidence 46899999999999999998 89999999999999999999986532 111 1 1 245689999
Q ss_pred CccccCCCCceE-EEEEecCHHHHHHHHhccc-c-CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044773 90 LSKDLGLPGFRV-GAIYSNDDTVVAAATKMSS-F-GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEK 166 (289)
Q Consensus 90 ~sK~~g~~G~r~-G~i~~~~~~~~~~~~~~~~-~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 166 (289)
+||.++.+|.|+ ||++++++.+.+.+..... + ...++..+.++...++.. . ...+...++.+.+.+.|++
T Consensus 203 ~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l---~----~r~~~~~~~~~~l~~~l~~ 275 (389)
T 3acz_A 203 VSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTL---P----IRMQIHMENGLKVAKFLEQ 275 (389)
T ss_dssp TTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH---H----HHHHHHHHHHHHHHHHHHH
T ss_pred ChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHH---H----HHHHHHHHHHHHHHHHHHc
Confidence 999999899998 9999977344444433322 2 224556666666666542 2 2223334455556666655
Q ss_pred cC---------------Ccee----cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeC---C------CCCC
Q 044773 167 AG---------------ISCL----KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISP---G------SSCH 218 (289)
Q Consensus 167 ~g---------------~~~~----~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p---g------~~f~ 218 (289)
++ +.+. ...++ ++.+.+.. . +....++++.||.+.+ | ..+.
T Consensus 276 ~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~-~~~~~l~~---~-------~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~ 344 (389)
T 3acz_A 276 HEKIVKVNHPGLESFPGHDIAKKQMTGYGS-TFLFEMKS---F-------EAAKKLMEHLKVCTLAVSLGCVDTLIEHPA 344 (389)
T ss_dssp CTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEESS---H-------HHHHHHHTTCSSSEEBSCCCCSSCEEECTT
T ss_pred CCCeeEEECCCCCCCccHHHHHhhCCCCCe-EEEEEECC---H-------HHHHHHHHhCCCcEECcCCCCcccEeeCCc
Confidence 31 1111 11244 44466642 1 1344556678998876 3 2221
Q ss_pred C---------------CCCCeEEEEEecCCHHHHHHHHHHHHHHHH
Q 044773 219 C---------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 219 ~---------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 249 (289)
. ..++.+|||++. ++.+++++.|.++++
T Consensus 345 ~~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~ 387 (389)
T 3acz_A 345 SMTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE 387 (389)
T ss_dssp TTTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred ccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 1 125799999986 466777777777664
No 185
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.9e-18 Score=158.80 Aligned_cols=218 Identities=10% Similarity=0.046 Sum_probs=146.4
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccC-----CCCccChhhhhhccccc
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFS-----SPGFVSIMEILKDRNCE 76 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~-----~~~~~~~~~~~~~~~~~ 76 (289)
+++++. +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.++... +....+....
T Consensus 199 l~~~i~--~~~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~------- 266 (497)
T 3mc6_A 199 VKKFIN--KNTVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF------- 266 (497)
T ss_dssp TGGGCC--SSEEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST-------
T ss_pred HHHHHh--hCCEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccc-------
Confidence 344444 46899999999999999988 889999999999999999999865321 1110100111
Q ss_pred cCCCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccC------C----CC-----hHHHHHHHHHhCCchH
Q 044773 77 NTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFG------L----VS-----SQTQYLLSALLSDKKF 141 (289)
Q Consensus 77 ~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~------~----~~-----~~~q~~~~~~l~~~~~ 141 (289)
...+.++++.|++|.++ +|.++||++++++.+..........+ . .+ ...+.++...+.
T Consensus 267 --~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~---- 339 (497)
T 3mc6_A 267 --RVPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG---- 339 (497)
T ss_dssp --TSTTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH----
T ss_pred --cCCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh----
Confidence 12355788999999875 77889999998776544321111110 0 01 122333333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--CCceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC
Q 044773 142 AQNYISENKKRLKQRHRKLVSGLEKA--GISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH 218 (289)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~ 218 (289)
...+++..++..++.+++.+.|.+. |+++.. +.++++. +.... .+..++...|. +.||.+.++..
T Consensus 340 -~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~-~~~~~-------~~~~~l~~~L~-~~Gi~v~~~~~-- 407 (497)
T 3mc6_A 340 -ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVIS-FSSKT-------LNIHELSDRLS-KKGWHFNALQK-- 407 (497)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEE-EECTT-------TTHHHHHHHHH-TTTCBCEECCS--
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEE-EeCCC-------CCHHHHHHHHH-hCCEEEecCCC--
Confidence 3335777788888999999999994 888774 4555544 44332 12346777776 56998876543
Q ss_pred CCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Q 044773 219 CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 219 ~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+..+|+++..++++++++++++|++++++...
T Consensus 408 ---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 408 ---PVALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp ---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred ---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 23689999767899999999999999987654
No 186
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.76 E-value=6.5e-17 Score=147.14 Aligned_cols=205 Identities=21% Similarity=0.234 Sum_probs=130.9
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCC
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWN 82 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 82 (289)
++++. +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+... . . ..+
T Consensus 134 ~~~i~--~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~~---~-~------------~~~ 192 (412)
T 2cb1_A 134 REALS--AKTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFGAAGALCR---P-L------------AWG 192 (412)
T ss_dssp HHHCC--TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGTTTTSCC---G-G------------GGT
T ss_pred HHHhc--cCCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCccccccCC---c-c------------ccC
Confidence 44443 47899999999999999998 99999999999999999999986422111 1 1 125
Q ss_pred ceEEEecCccccCCCCceEEEEEecC-H--------------------------HHHHHHHhc--cccC-CCChHHHHHH
Q 044773 83 RVHIVYSLSKDLGLPGFRVGAIYSND-D--------------------------TVVAAATKM--SSFG-LVSSQTQYLL 132 (289)
Q Consensus 83 ~~i~i~s~sK~~g~~G~r~G~i~~~~-~--------------------------~~~~~~~~~--~~~~-~~~~~~q~~~ 132 (289)
.++++.|+||.++.+|.|+|++++.+ . .+.+.++.. ...+ ..++.....+
T Consensus 193 ~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~ 272 (412)
T 2cb1_A 193 AHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLL 272 (412)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHH
T ss_pred CeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHH
Confidence 67999999999988999999998755 2 222333322 1122 1233333333
Q ss_pred HHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee-cC----------------CceEEEEEecCccccCCChh
Q 044773 133 SALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA-GISCL-KS----------------NAGLFCWVDMRHLLSSNTFE 194 (289)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~----------------~~g~~~~i~~~~~~~~~~~~ 194 (289)
...++. +....+...++.+++.+.|.+. ++... .| ..+.++.+.+ . +.
T Consensus 273 ~~~l~~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~--~~---- 338 (412)
T 2cb1_A 273 FQGLET-------VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G--DL---- 338 (412)
T ss_dssp HHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S--SH----
T ss_pred HcCCch-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C--CH----
Confidence 333322 2333444567778888888876 66633 22 1233555666 2 21
Q ss_pred hHHHHHHHHHHhcCeEEeCCC---------CCCC---------------CCCCeEEEEEec-CCHHHHHHHHHHHHH
Q 044773 195 AEMELWKKIVYDVKLNISPGS---------SCHC---------------TEPGWFRVCFAN-MSEDTLKLSMQRLKA 246 (289)
Q Consensus 195 ~~~~~~~~ll~~~gi~v~pg~---------~f~~---------------~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 246 (289)
+....++++.||.+ .++ .+.. ..++.+|+|++. +++++++.+.+.|++
T Consensus 339 ---~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 339 ---ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp ---HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 23445566789998 764 2211 015799999976 566777777776653
No 187
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.74 E-value=3.3e-17 Score=147.45 Aligned_cols=210 Identities=14% Similarity=0.138 Sum_probs=137.1
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC-ccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGT-VFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|+.. .+.+. .+..+ + ++.+.
T Consensus 125 ~~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D~a~~~g~~~~~~---~~~~~------------~-~i~~~ 182 (388)
T 1b9h_A 125 PRTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQDAAHAHGARWQGK---RVGEL------------D-SIATF 182 (388)
T ss_dssp TTEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETTE---EGGGS------------S-SCEEE
T ss_pred cCceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEecchhcCCccCCe---ecccc------------c-ceEEE
Confidence 4677755 9999999987 899999999999999999999852 22221 11111 2 57788
Q ss_pred cCccccCCCCceEEEEEecCHHH--HHHHHhcccc--------------CCCChHHHHHHHHHhCCchHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTV--VAAATKMSSF--------------GLVSSQTQYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~--~~~~~~~~~~--------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
||||..+++|.|.||++++++.+ .+.+...... +....+.+..++.++.. .+++++..+.
T Consensus 183 S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~----~~~l~~~~~~ 258 (388)
T 1b9h_A 183 SFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQ----LARLDEQIAV 258 (388)
T ss_dssp ECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHH----HTTHHHHHHH
T ss_pred EccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHH----HHHHHHHHHH
Confidence 98866655667899999977645 3433322111 11101122222222221 2235566777
Q ss_pred HHHHHHHHHHHHHhc-CCceec------CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-----
Q 044773 153 LKQRHRKLVSGLEKA-GISCLK------SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT----- 220 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~-g~~~~~------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~----- 220 (289)
++++++++.+.|+++ |+++.. +.+++++|+.++... ..+..++...|. ++||.+.++......
T Consensus 259 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~ 333 (388)
T 1b9h_A 259 RDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT----EERRNALVDRLV-EAGLPAFAAFRAIYRTDAFW 333 (388)
T ss_dssp HHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC----HHHHHHHHHHHH-HTTCCEEECCCCGGGSHHHH
T ss_pred HHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC----cccHHHHHHHHH-HCCCCcccccCccccChHhH
Confidence 888899999999987 777665 355788999987421 012345777776 569999876532100
Q ss_pred -----C-----------------CCeEEEEEec-C-CHHHHHHHHHHHHHHHHH
Q 044773 221 -----E-----------------PGWFRVCFAN-M-SEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 221 -----~-----------------~~~~Ris~~~-~-~~e~l~~~l~~l~~~l~~ 250 (289)
. .+.+||++.. + +++|++.+++.|++++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 334 ELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp HSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred hcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0 1359999954 7 899999999999988754
No 188
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.74 E-value=2.5e-17 Score=150.68 Aligned_cols=202 Identities=15% Similarity=0.119 Sum_probs=126.0
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+ .... ..+.++++.|
T Consensus 166 ~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~-----~~~~------------~~g~div~~S 225 (430)
T 3ri6_A 166 ETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL-----LEAK------------RLGVDIEVLS 225 (430)
T ss_dssp TTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT-----CCGG------------GGTCSEEEEE
T ss_pred CCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-----CChH------------HcCCEEEEEC
Confidence 47999999999999999998 88999999999999999999985322 1111 1245689999
Q ss_pred CccccCCCCceEEEEEe--cCHHH------------------HHHHH-hc-cccCC-CChHHHHHHHHHhCCchHHHHHH
Q 044773 90 LSKDLGLPGFRVGAIYS--NDDTV------------------VAAAT-KM-SSFGL-VSSQTQYLLSALLSDKKFAQNYI 146 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~--~~~~~------------------~~~~~-~~-~~~~~-~~~~~q~~~~~~l~~~~~~~~~~ 146 (289)
+||.+|.+|..+|.+++ .+... ..... .. ..++. .++.... .++.. .+.+
T Consensus 226 ~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~---l~l~~----l~~l 298 (430)
T 3ri6_A 226 STKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAY---LQSLG----LETM 298 (430)
T ss_dssp CCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHH---HHHHH----HHHH
T ss_pred CcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHH---HHHhh----hhhH
Confidence 99999866655555554 22111 11111 11 12221 2322222 22221 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCc-eecCC----------------ceEEEEEecCccccCCChhhHHHHHHHHHHhcC
Q 044773 147 SENKKRLKQRHRKLVSGLEKA-GIS-CLKSN----------------AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVK 208 (289)
Q Consensus 147 ~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~----------------~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~g 208 (289)
..+.+...++.+.+.+.|+++ +++ +..|. ||+.+|+.++.. .+..++...+ +..+
T Consensus 299 ~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~------~~~~~~~~~l-~~~~ 371 (430)
T 3ri6_A 299 ALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK------EASYRFMDAL-KLIR 371 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH------HHHHHHHHHC-SSSE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH------HHHHHHHHhC-Ccce
Confidence 555566778888899999877 454 33343 565888888732 2223444443 3445
Q ss_pred eEEeCCCCCCC---------------------CCCCeEEEEEecCCHHHHHHHHHHHHHHH
Q 044773 209 LNISPGSSCHC---------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 209 i~v~pg~~f~~---------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 248 (289)
+.+.+|..+.. ..++.||||++. |+.+++++.|++++
T Consensus 372 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl~~dl~~al 429 (430)
T 3ri6_A 372 RATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDLKEDILQAL 429 (430)
T ss_dssp ECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred ecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence 66677766652 235789999997 55566666666554
No 189
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.73 E-value=6.8e-17 Score=149.01 Aligned_cols=216 Identities=14% Similarity=0.029 Sum_probs=140.7
Q ss_pred hHHHh-hh--CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccC
Q 044773 2 YQLAQ-KR--HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~-~~--~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (289)
+++++ .. .+++.+|++++||||||.+.+ +++|.++|+++|+++++|++|....++ ..... ...+.
T Consensus 219 l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g-~~~~~-~~~~~------- 286 (456)
T 2z67_A 219 IENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNY-YLEKL-KKAFK------- 286 (456)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHH-HHHHH-HHHHT-------
T ss_pred HHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHH-hhHHH-HHhhC-------
Confidence 45555 32 236778889999999999988 999999999999999999999865331 10011 11111
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhc-cccCCCC-hHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKM-SSFGLVS-SQTQYLLSALLSDKKFAQNYISENKKRLKQR 156 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~-~~~~~~~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 156 (289)
. +.++++.|++|.++ .+.++||++++++.+.+.+... ......+ .+.+.++...+. ...+++..+++.++
T Consensus 287 -~-~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~-----~~~~~~~~~~~~~~ 358 (456)
T 2z67_A 287 -Y-RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-----SKNYLELVKNQKNS 358 (456)
T ss_dssp -S-CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred -C-CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 1 33467899999875 5688999999766555444322 1111111 222333332222 34467888889999
Q ss_pred HHHHHHHHHhc----CCceecCCceEEEEEec--CccccCCChhhHHHHHHHHHHhcCe---EEe------CCCCCCCCC
Q 044773 157 HRKLVSGLEKA----GISCLKSNAGLFCWVDM--RHLLSSNTFEAEMELWKKIVYDVKL---NIS------PGSSCHCTE 221 (289)
Q Consensus 157 ~~~l~~~l~~~----g~~~~~~~~g~~~~i~~--~~~~~~~~~~~~~~~~~~ll~~~gi---~v~------pg~~f~~~~ 221 (289)
++++.+.|.+. |+.+.+++ + ++++++ +.. ..++...|. +.|| .+. +|..|...+
T Consensus 359 ~~~l~~~L~~~~~~~g~~v~~~~-~-~v~~~~~~~~~--------~~~l~~~L~-~~gi~~~rv~~~~g~f~G~~~~~~~ 427 (456)
T 2z67_A 359 KKLLDELLNDLSKKTGGKFLDVE-S-PIASCISVNSD--------PVEIAAKLY-NLRVTGPRGIKKTDHFGNCYLGTYT 427 (456)
T ss_dssp HHHHHHHHHHHHHHSSCCBCCCC-C-SSEEEEECSSC--------HHHHHHHHH-HTTEESCEEECTTCHHHHTCSSCCS
T ss_pred HHHHHHHHHhcccccCCEecCCC-C-eEEEEEecccH--------HHHHHHHHH-HcCCCcceEEeecCccccccccccC
Confidence 99999999887 87777776 4 344555 221 134666666 4465 343 244444444
Q ss_pred CCeEEEEEec-CCHHHHHHHHHHHHHHH
Q 044773 222 PGWFRVCFAN-MSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 222 ~~~~Ris~~~-~~~e~l~~~l~~l~~~l 248 (289)
.+++|++++. ++++++++++++|++++
T Consensus 428 ~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 428 HDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred cchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 6799999974 69999999999998754
No 190
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.72 E-value=3.9e-17 Score=151.29 Aligned_cols=203 Identities=14% Similarity=0.151 Sum_probs=131.1
Q ss_pred CccEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 11 KVKGVLVTNPSNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
++++|+++..+|++|. +.+++.+++|.++|+++|+++|+||+|.++++.|.. ..+..+ + . ...+.+.|
T Consensus 258 ~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~-~~~~~~-g--------v-~~~~Di~t 326 (472)
T 1ohv_A 258 TVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKF-WAHEHW-G--------L-DDPADVMT 326 (472)
T ss_dssp CEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGG-C--------C-SSCCSEEE
T ss_pred CEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCc-hhcccc-C--------C-CCCCCEEE
Confidence 5777666655888996 568999999999999999999999999976554431 122111 0 0 00123568
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhc--cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA 167 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 167 (289)
|||.+ ++| ||++ +++ +.. .... ...+..|++.+.++.++++.. .+ ....++++++++++.+.|+++
T Consensus 327 ~sK~~-l~G---G~~~-~~~-~~~-~~~~~~~~T~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l 394 (472)
T 1ohv_A 327 FSKKM-MTG---GFFH-KEE-FRP-NAPYRIFNTWLGDPSKNLLLAEVINII---KR--EDLLSNAAHAGKVLLTGLLDL 394 (472)
T ss_dssp ECGGG-SSE---EEEE-CGG-GSC-SSSSSSCCSSSSCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHH
T ss_pred Ecccc-ccC---CccC-chh-hcc-cccccccCccCccHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHH
Confidence 99994 245 7776 433 321 1111 122236778888777777532 11 234566666777777777654
Q ss_pred --C----CceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHH
Q 044773 168 --G----ISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLS 240 (289)
Q Consensus 168 --g----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~ 240 (289)
+ +....+.+ .+++++++.. ....+++..|+ ++||.+.|+. .+++||+++. +++++++++
T Consensus 395 ~~~~~~~v~~~~~~g-~~~~~~~~~~------~~~~~~~~~l~-~~Gv~~~~~g------~~~iRi~~~~~~t~e~i~~~ 460 (472)
T 1ohv_A 395 QARYPQFISRVRGRG-TFCSFDTPDE------SIRNKLISIAR-NKGVMLGGCG------DKSIRFRPTLVFRDHHAHLF 460 (472)
T ss_dssp HHHCTTTCEEEEEET-TEEEEECSSH------HHHHHHHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHH
T ss_pred HhhCCCcEEeecCCc-eEEEEEeCCh------hHHHHHHHHHH-HCCeEEecCC------CCEEEEECCCCCCHHHHHHH
Confidence 1 22234444 4555676532 12346888887 5699999852 4689998864 799999999
Q ss_pred HHHHHHHHHH
Q 044773 241 MQRLKAFVDS 250 (289)
Q Consensus 241 l~~l~~~l~~ 250 (289)
+++|.+++++
T Consensus 461 ~~~l~~~l~~ 470 (472)
T 1ohv_A 461 LNIFSDILAD 470 (472)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 191
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.72 E-value=1.1e-16 Score=144.94 Aligned_cols=205 Identities=13% Similarity=0.193 Sum_probs=133.0
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCc-cCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTV-FSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|.... +++.. + . . -.++++.
T Consensus 150 ~~~~~v~---~~n~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~------~-~--------~-~~di~~~ 207 (399)
T 2oga_A 150 PRTRALL---PVHLYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYRGRR------I-G--------A-GSSVAAF 207 (399)
T ss_dssp TTEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETTEE------T-T--------C-TTCEEEE
T ss_pred CCCeEEE---EeCCcCCccC---HHHHHHHHHHcCCEEEEECcccccCccCCee------c-c--------c-ccCEEEE
Confidence 3577765 5789999988 8999999999999999999998542 22111 1 0 0 1247888
Q ss_pred cC--ccccCCCCceEEEEEecCHHHHHHHHhcccc--------------CCCChHHHHHHHHHhCCchHHHHHHHHHHHH
Q 044773 89 SL--SKDLGLPGFRVGAIYSNDDTVVAAATKMSSF--------------GLVSSQTQYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 89 s~--sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~--------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
|+ ||.+|.+| |.||++++++.+.+.+...... ...+++...++...++. +++..++
T Consensus 208 S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-------~~~~~~~ 279 (399)
T 2oga_A 208 SFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-------LDSWNGR 279 (399)
T ss_dssp ECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHH
T ss_pred eCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-------HHHHHHH
Confidence 88 79999668 9999999766665555432211 12355555555555543 2233445
Q ss_pred HHHHHHHHHHHHHhc-CCcee-cCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC-----------C
Q 044773 153 LKQRHRKLVSGLEKA-GISCL-KSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH-----------C 219 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~-g~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-----------~ 219 (289)
.+++.+++.+.|.++ |+++. .++++.++|+.++-... +..++...|. ++||.+.++.... .
T Consensus 280 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~ 353 (399)
T 2oga_A 280 RSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTE-----RRDELRSHLD-ARGIDTLTHYPVPVHLSPAYAGEAP 353 (399)
T ss_dssp HHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECS-----SHHHHHHHHH-HTTBCCBCSCSSCGGGSHHHHTTSC
T ss_pred HHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECC-----CHHHHHHHHH-HCCCceecCCCCccccchhhcccCC
Confidence 556677888888876 66654 34455555533321111 1245777765 6799998753210 0
Q ss_pred C----C------CCeEEEEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 220 T----E------PGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 220 ~----~------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
. + .+.+||++.. +++++++.+++.|++++++
T Consensus 354 ~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 354 PEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp CTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0 2579999954 7999999999999988764
No 192
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.72 E-value=2.3e-17 Score=151.75 Aligned_cols=203 Identities=16% Similarity=0.098 Sum_probs=125.6
Q ss_pred hCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCC-CccCCCCccChhhhhhccccccCCCCCceEE
Q 044773 8 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSG-TVFSSPGFVSIMEILKDRNCENTEVWNRVHI 86 (289)
Q Consensus 8 ~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~ 86 (289)
.++++++|++++| |++|.+.+ +++|+++|+++|+++|+|++|+. +.|.+. ..+..++ +.+++
T Consensus 143 ~~~~~~~v~~~~~-n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~------------g~Di~ 205 (446)
T 2x3l_A 143 NNDGHKLVVLTYP-NYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNY------------QADYV 205 (446)
T ss_dssp ----CCEEEEESS-CTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGG------------TCSEE
T ss_pred cCCCceEEEEECC-CCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHc------------CCCEE
Confidence 3467899999994 55999999 89999999999999999999986 223333 2333222 23488
Q ss_pred EecCccccCCCCceEEEEEecCHHHH-HHHHh-ccc--cCCCChHHHHHHHHHhCCchHHHHHH-HHHHHHHHHHHHHHH
Q 044773 87 VYSLSKDLGLPGFRVGAIYSNDDTVV-AAATK-MSS--FGLVSSQTQYLLSALLSDKKFAQNYI-SENKKRLKQRHRKLV 161 (289)
Q Consensus 87 i~s~sK~~g~~G~r~G~i~~~~~~~~-~~~~~-~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~ 161 (289)
+.|+||+++ ++.++||++++++.+. ..+.. ... .+..+.....++..++. ++.... ++..++.++..+++.
T Consensus 206 ~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~---~l~~~g~~~~~~~~~~l~~~l~ 281 (446)
T 2x3l_A 206 VQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQ---FYKTYDSTLFFAKRAQLIECLE 281 (446)
T ss_dssp EECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHH---HHHHCCCHHHHHHHHHHHHHHH
T ss_pred EECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHH---HHHHhCHHHHHHHHHHHHHHHH
Confidence 999999765 4445799999765432 12221 111 22233333333332222 112111 113344444444444
Q ss_pred HHHHhcCCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe-CCCCCCCCCCCeEEEEEec-CCHHHHHH
Q 044773 162 SGLEKAGISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS-PGSSCHCTEPGWFRVCFAN-MSEDTLKL 239 (289)
Q Consensus 162 ~~l~~~g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-pg~~f~~~~~~~~Ris~~~-~~~e~l~~ 239 (289)
+. |+++..+.++.++|+.++. . +..++...|.++ ||.+. +| .+++|++++. ++++++ +
T Consensus 282 ~~----g~~~~~~~~~~~l~i~~~~-~------~~~~l~~~L~~~-GI~v~~~g-------~~~iRi~~~~~~t~e~i-~ 341 (446)
T 2x3l_A 282 NK----GFEMLQVDDPLKLLIKYEG-F------TGHDIQNWFMNA-HIYLELAD-------DYQALAILPLWHHDDTY-L 341 (446)
T ss_dssp HH----TCEEEECSSTTEEEEECTT-S------CHHHHHHHHHHT-TEEESEEC-------SSCEEEECCCCCTTCCC-C
T ss_pred Hc----CCEECcCCCCeEEEEEeCC-c------CHHHHHHHHHHC-CCEEEecC-------CCEEEEEeecCCCHHHH-H
Confidence 44 7887766555578888762 1 124577777655 99997 43 2579999964 588899 9
Q ss_pred HHHHHHHHHHHH
Q 044773 240 SMQRLKAFVDSI 251 (289)
Q Consensus 240 ~l~~l~~~l~~~ 251 (289)
++++|+++++..
T Consensus 342 l~~aL~~~~~~~ 353 (446)
T 2x3l_A 342 FDSLLRKIEDMI 353 (446)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHHHhh
Confidence 999999987655
No 193
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.56 E-value=4.4e-19 Score=163.50 Aligned_cols=219 Identities=16% Similarity=0.116 Sum_probs=139.1
Q ss_pred hHHHhhhC-CCccEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRH-LKVKGVLVTNPSNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~-~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
++++++++ +++++|+++..+|++|.++ +.+.+++|.++|+++|+++|+||+|. + ..+... . .+
T Consensus 223 l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~-a-~~----------- 287 (465)
T 2yky_A 223 TADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGG-A-QE----------- 287 (465)
Confidence 45555542 3677766654466699654 68899999999999999999999999 6 333211 1 11
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-------ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-------MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
..+....+.||||++| +|+|+||++++++. .+.+.. ....+..|++.+.++.+.|+... + ....++
T Consensus 288 ~~gv~pDi~t~sK~lg-~G~piG~v~~~~~i-~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~---~--~~~~~~ 360 (465)
T 2yky_A 288 MLGISADLTTLGKYIG-GGMSFGAFGGRRDL-MERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIY---T--RQAASD 360 (465)
Confidence 1233344679999999 69999999996554 443332 11233477788887777766432 1 123445
Q ss_pred HHHHHHHHHHHHHhc----CCceecCCceEEEEEecCc-cccC------CChhhHHHHHHHHHHhcCeEEeCCCCCCCCC
Q 044773 153 LKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRH-LLSS------NTFEAEMELWKKIVYDVKLNISPGSSCHCTE 221 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~i~~~~-~~~~------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~ 221 (289)
++++.+++.+.|++. ++....+..|.++++.+.+ .... .......+++..|+ +.||.+.|+. |.
T Consensus 361 ~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~~--- 435 (465)
T 2yky_A 361 LSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRG-MY--- 435 (465)
Confidence 555555555555543 3333344556777787764 1100 00011245777777 6699999875 32
Q ss_pred CCeEEEEEecCCHHHHHHHHHHHHHHHHHHH
Q 044773 222 PGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 222 ~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 252 (289)
. +++. +++++++++++++.+++++..
T Consensus 436 ---~-~s~~-~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 436 ---A-LSLE-IADAGRDAFAEALADFIGEQR 461 (465)
Confidence 1 6665 689999999999999887653
No 194
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.71 E-value=2.1e-16 Score=143.38 Aligned_cols=209 Identities=14% Similarity=0.136 Sum_probs=131.7
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCC
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWN 82 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 82 (289)
++++. +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. .+ . ..+
T Consensus 146 ~~~i~--~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~-~~----~------------~~g 203 (400)
T 3nmy_A 146 KAAIR--ADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ-RP----L------------SLG 203 (400)
T ss_dssp HHHCC--TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC-CG----G------------GGT
T ss_pred HHHhc--cCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC-Ch----h------------hcC
Confidence 44443 47899999999999999998 999999999999999999999743221 11 1 124
Q ss_pred ceEEEecCccccCCCCceEEE--EEecCHHHHHHHHhcccc--CCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 83 RVHIVYSLSKDLGLPGFRVGA--IYSNDDTVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 83 ~~i~i~s~sK~~g~~G~r~G~--i~~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
.++++.|+||.++.+|.++|. +++.++.+.+.+...... ...++.....+...++. +..+.+...++.+
T Consensus 204 ~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-------l~~r~~~~~~~a~ 276 (400)
T 3nmy_A 204 ADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-------LPLRMRAHCENAL 276 (400)
T ss_dssp CSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-------HHHHHHHHHHHHH
T ss_pred CcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-------HHHHHHHHHHHHH
Confidence 568999999999878777755 566666666655443322 22556665555555554 2344555677777
Q ss_pred HHHHHHHhc-CCc-eecC----------------CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC-
Q 044773 159 KLVSGLEKA-GIS-CLKS----------------NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC- 219 (289)
Q Consensus 159 ~l~~~l~~~-g~~-~~~~----------------~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~- 219 (289)
.+.+.|+++ .+. +..| ..|..+++++.... ....++...+ +-.++.+..|..++.
T Consensus 277 ~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~-----~~~~~~~~~l-~~~~~~~s~G~~~sl~ 350 (400)
T 3nmy_A 277 ALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF-----DAAKRFCEKT-ELFTLAESLGGVESLV 350 (400)
T ss_dssp HHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH-----HHHHHHHHHC-SSSEECSCCCSSSCEE
T ss_pred HHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH-----HHHHHHHHcC-CcceEecCCCCCccee
Confidence 888888776 222 2222 13557778876421 1112333332 233334444433220
Q ss_pred --------------------CCCCeEEEEEecCCHHHHHHHHHHHHHHHH
Q 044773 220 --------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 220 --------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 249 (289)
..++.+|+|++. |+.+++++.|.++++
T Consensus 351 ~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 351 NHPAVMTHASIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV 397 (400)
T ss_dssp ECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred eCccccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 135789999997 555566667777665
No 195
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.70 E-value=4.5e-16 Score=143.21 Aligned_cols=224 Identities=13% Similarity=-0.000 Sum_probs=142.9
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHc------CCEEEEecCCCCCcc---CCCCccChhhhhhcc
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEK------NIHLISDEIYSGTVF---SSPGFVSIMEILKDR 73 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~------~~~li~Dea~~~~~~---~~~~~~~~~~~~~~~ 73 (289)
++++. +++++|++++|+||||.+.+ +++|.++|+++ ++++++|++|.++.. .......+
T Consensus 181 ~~~i~--~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~------- 248 (452)
T 2dgk_A 181 IEACD--ENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF------- 248 (452)
T ss_dssp HHHCC--TTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-------
T ss_pred HHHHh--hCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc-------
Confidence 44443 46899999999999999987 88999999995 999999999987532 11111111
Q ss_pred ccccCCCCCceEEEecCccccCCCCceEEEEEecCHH-HHHHHHhccccC-----------CC---ChHHHHHHHHHhCC
Q 044773 74 NCENTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDT-VVAAATKMSSFG-----------LV---SSQTQYLLSALLSD 138 (289)
Q Consensus 74 ~~~~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~-~~~~~~~~~~~~-----------~~---~~~~q~~~~~~l~~ 138 (289)
...+.+.++.|++|.+ +.|.++||++++++. +.+.+.....+. .. ..+.+.++...+.
T Consensus 249 -----~~~~~d~~~~~~hK~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg- 321 (452)
T 2dgk_A 249 -----RLPRVKSISASGHKFG-LAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG- 321 (452)
T ss_dssp -----TSTTEEEEEEETTTTT-CCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-
T ss_pred -----CCCCCcEEEECccccc-CCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh-
Confidence 0124456788999954 588999999997653 223221111111 01 1233333333332
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC-----CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe
Q 044773 139 KKFAQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS-----NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS 212 (289)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 212 (289)
.+.+++..+++.++++++.+.|++. ++++..+ ..+ ++.+.++..... . .+..++...|. +.||.+.
T Consensus 322 ----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~-~v~f~~~~~~~~-~-~~~~~l~~~L~-~~Gi~v~ 393 (452)
T 2dgk_A 322 ----REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIP-AVCFKLKDGEDP-G-YTLYDLSERLR-LRGWQVP 393 (452)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSS-EEEEEECTTCCC-S-CCHHHHHHHHH-HTTCBCC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeE-EEEEEecCcccc-c-CCHHHHHHHHH-hcCCeee
Confidence 3446778888999999999999988 5777643 334 444555532100 0 11235777776 5698654
Q ss_pred CCCCCC-CCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 213 PGSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 213 pg~~f~-~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
...... ..+.+++|++++. +++++++.+++.|+++++....
T Consensus 394 ~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 394 AFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp EEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 321111 1235689999975 6899999999999999887665
No 196
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.70 E-value=4.6e-16 Score=140.04 Aligned_cols=207 Identities=10% Similarity=0.093 Sum_probs=132.2
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC-ccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGT-VFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|+++ ||||.+.+ +++|.++|+++|+++|+|++|+.. .+.+.. + + . .++++.
T Consensus 126 ~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~------~-~--------~--~d~~~~ 182 (393)
T 1mdo_A 126 PQTKAIIPV---HYAGAPAD---LDAIYALGERYGIPVIEDAAHATGTSYKGRH------I-G--------A--RGTAIF 182 (393)
T ss_dssp TTEEEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETTEE------T-T--------S--SSEEEE
T ss_pred CCceEEEEe---CCCCCcCC---HHHHHHHHHHcCCeEEEECccccCCeECCee------c-C--------C--CCeEEE
Confidence 368887776 47999877 899999999999999999999852 232211 1 0 1 558899
Q ss_pred cCc--cccCCCCceEEEEEecCHHHHHHHHhccccC--------------------------CCChHHHHHHHHHhCCch
Q 044773 89 SLS--KDLGLPGFRVGAIYSNDDTVVAAATKMSSFG--------------------------LVSSQTQYLLSALLSDKK 140 (289)
Q Consensus 89 s~s--K~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~--------------------------~~~~~~q~~~~~~l~~~~ 140 (289)
|+| |.++ |.+.||++++++.+.+.+......+ ..+.+...+....++
T Consensus 183 S~~k~K~l~--~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~--- 257 (393)
T 1mdo_A 183 SFHAIKNIT--CAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ--- 257 (393)
T ss_dssp ECCTTSSSC--SSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH---
T ss_pred eCCCCCccc--cccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH---
Confidence 999 6664 4589999997566655544321110 023333222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCceec-C-----CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCC
Q 044773 141 FAQNYISENKKRLKQRHRKLVSGLEKAGISCLK-S-----NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPG 214 (289)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~-----~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg 214 (289)
.+++..+..+++.+++.+.|.+.++++.. + .+++++|+.++..... .+..++...|. ++||.+.+|
T Consensus 258 ----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~~~l~-~~gi~v~~~ 329 (393)
T 1mdo_A 258 ----KLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCG---ITRDALMASLK-TKGIGTGLH 329 (393)
T ss_dssp ----THHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHS---SCHHHHHHHHH-HTTBCCBCC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEecccccc---cCHHHHHHHHH-hCCCCcccc
Confidence 13444555566778888899887766542 2 3456788888641000 11245777766 579999988
Q ss_pred CCCC--------------CC-----CCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 215 SSCH--------------CT-----EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 215 ~~f~--------------~~-----~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
..+. .+ ....+||++.. +++++++.++++|+++++...
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 330 FRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQGS 387 (393)
T ss_dssp CCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred cCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 7541 01 13479999963 799999999999998876554
No 197
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.69 E-value=2.7e-15 Score=138.98 Aligned_cols=220 Identities=14% Similarity=0.127 Sum_probs=144.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCC-CccCCCCccChhhhhhccccccCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSG-TVFSSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++... ++|+|++++|+||+ .++ +++|.++|+++|+++++|++|.. +...+....++ .
T Consensus 195 le~~l~~~-~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~-~------------ 255 (490)
T 2a7v_A 195 LALTARLF-RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-K------------ 255 (490)
T ss_dssp HHHHHHHH-CCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG-G------------
T ss_pred HHHHHhhc-CCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCC-C------------
Confidence 45555543 57898888888875 445 99999999999999999999862 22223222111 1
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCH--------------HHHHHHHhcc-cc--CCCChHHHHHHHHHhCCchHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDD--------------TVVAAATKMS-SF--GLVSSQTQYLLSALLSDKKFAQ 143 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~--------------~~~~~~~~~~-~~--~~~~~~~q~~~~~~l~~~~~~~ 143 (289)
..++++.|+||+++ |.+.|+++++++ .+.+.++... .. +.++.....+++.++.... .
T Consensus 256 -~aDiv~~S~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~--~ 330 (490)
T 2a7v_A 256 -HADIVTTTTHKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQAC--T 330 (490)
T ss_dssp -TCSEEEEESSGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHH--S
T ss_pred -CCCEEEECCcccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHh--h
Confidence 23488999999984 345599999764 2344444321 11 2233344444444444321 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC---C
Q 044773 144 NYISENKKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH---C 219 (289)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---~ 219 (289)
...++..+++.++++++.+.|.+.|+++.. +....++|+++...... ..+ +...+++.||.+.++..++ +
T Consensus 331 ~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~~-----~~~-~~~~L~~~GI~v~~~~~p~d~~p 404 (490)
T 2a7v_A 331 PMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLD-----GAR-AERVLELVSITANKNTCPGDRSA 404 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCC-----HHH-HHHHHHHTTEECEEECCTTCCCS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCCC-----HHH-HHHHHHhCCeEEecCccCCCCCC
Confidence 334777888999999999999999998864 33457788888643111 123 4445568899998543333 2
Q ss_pred CCCCeEEEEEec-----CCHHHHHHHHHHHHHHHHHH
Q 044773 220 TEPGWFRVCFAN-----MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 220 ~~~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~~~ 251 (289)
..++.+||+... .++++++++.+.|.+++...
T Consensus 405 ~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 405 ITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp SSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 345789997732 47899999999999988754
No 198
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.68 E-value=6.9e-16 Score=140.70 Aligned_cols=212 Identities=13% Similarity=0.164 Sum_probs=131.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCC-CCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYS-GTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|++++ |||...+ +++|.++|+++|+++|+|++|+ ++.+++.. +..+ .+ +++.
T Consensus 137 ~~~~~v~~~~---~tG~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~-----------~d--i~~~ 194 (424)
T 2po3_A 137 PRTSAVVGVH---LWGRPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGRP---AGSL-----------GD--AEVF 194 (424)
T ss_dssp TTEEEEEEEC---GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSS-----------SS--EEEE
T ss_pred cCCcEEEEEC---CCCCcCC---HHHHHHHHHHcCCEEEEECccccCCeECCee---cccc-----------cC--EEEE
Confidence 4688888764 7998766 9999999999999999999998 45444321 1111 12 8899
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhccccCC----------CC-hHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGL----------VS-SQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~----------~~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
||||..+++|.|.||++++++.+.+.+......+. .+ .+.+.+++.++.. .+.+++..++.+++.
T Consensus 195 S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~ 270 (424)
T 2po3_A 195 SFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNH 270 (424)
T ss_dssp ECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred eCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 99955555668999999975665555443221110 00 1122222232321 233556667777788
Q ss_pred HHHHHHHHhc-CCceec-CCce----EEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC-----------
Q 044773 158 RKLVSGLEKA-GISCLK-SNAG----LFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT----------- 220 (289)
Q Consensus 158 ~~l~~~l~~~-g~~~~~-~~~g----~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~----------- 220 (289)
+++.+.|.++ |+++.. ++++ +++++.++..... .+..++...| .++||.+.+ .|++.
T Consensus 271 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~L-~~~gI~v~~--~~~~~~~~~~~~~~~g 344 (424)
T 2po3_A 271 AAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTG---IHRDLVMEVL-KAEGVHTRA--YFSPGCHELEPYRGQP 344 (424)
T ss_dssp HHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHS---SCHHHHHHHH-HHTTEECBC--TTCSCGGGSTTTTTSC
T ss_pred HHHHHHhccCCCccccCCCCCCccccEEEEEEECCccch---hhHHHHHHHH-HHCCCceec--ccCCccccchhhhhcC
Confidence 8888888876 777665 4443 2333666531000 1123566655 577999987 22211
Q ss_pred ---CCCe-------EEEEE-ecCCHHHHHHHHHHHHHHHHHHHH
Q 044773 221 ---EPGW-------FRVCF-ANMSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 221 ---~~~~-------~Ris~-~~~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
.+.. +|+++ ..++++++++++++|+++++....
T Consensus 345 ~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~~ 388 (424)
T 2po3_A 345 HAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRGRE 388 (424)
T ss_dssp CCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 0112 66764 337999999999999999876543
No 199
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.68 E-value=1e-15 Score=142.52 Aligned_cols=213 Identities=9% Similarity=0.124 Sum_probs=136.0
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCc
Q 044773 12 VKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLS 91 (289)
Q Consensus 12 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~s 91 (289)
+.+|++++|+||||..-+ +++|.++|+++|+++++|++|++..+... .. ..+. +....++++.|++
T Consensus 259 ~~~vv~~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~---~~~~-------gi~~~D~i~~s~h 324 (497)
T 2qma_A 259 PFAIVGTAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-HK---SRLK-------GVERAHSISVDFH 324 (497)
T ss_dssp EEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-TG---GGGT-------TGGGCSEEEEETT
T ss_pred ceEEEEcCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-ch---Hhhc-------CcccCCEEEEcch
Confidence 348888999999999877 99999999999999999999987654322 11 1111 0113347788999
Q ss_pred cccCCCCceEEEEEecCHHHHHHHHhccccCC------C-------------ChHHHHHHHHHhCCchHHHHHHHHHHHH
Q 044773 92 KDLGLPGFRVGAIYSNDDTVVAAATKMSSFGL------V-------------SSQTQYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 92 K~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~------~-------------~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
|.++.| .++|+++++++...+.+.....+.. . ..+.+.++...+. .+.+++..++
T Consensus 325 K~l~~p-~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg-----~~g~~~~~~~ 398 (497)
T 2qma_A 325 KLFYQT-ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVG-----PKALGDMYDH 398 (497)
T ss_dssp TTTCCC-SSCEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHTC-----HHHHHHHHHH
T ss_pred hccCCC-cceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhC-----HHHHHHHHHH
Confidence 999855 6999999976653322211111110 0 1122222233332 3346677788
Q ss_pred HHHHHHHHHHHHHhc-CCcee-cCCceEEEEEecCccccCCChhh-HHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEE
Q 044773 153 LKQRHRKLVSGLEKA-GISCL-KSNAGLFCWVDMRHLLSSNTFEA-EMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 229 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~-g~~~~-~~~~g~~~~i~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~ 229 (289)
+.++++++.+.|++. ++++. ++..+ ++++++...... ... ..++...+. +.|+.+.++..+ .+.+++|+++
T Consensus 399 ~~~~a~~l~~~L~~~~~~~~~~~~~~~-~v~f~~~~~~~~--~~~l~~~l~~~l~-~~G~~~~~~~~~--~g~~~lRis~ 472 (497)
T 2qma_A 399 LLAQTLEVADMIRTNDQFELLAEPSLS-TVLFRATHETAD--LDELNKALRLEAL-TRGIAVLGETIV--DGKTALKFTI 472 (497)
T ss_dssp HHHHHHHHHHHHHTCTTEEECSCCSSS-EEEEEECCSSSC--HHHHHHHHHHHHH-HHTSCBCEEEEE--TTEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCeEEEcCCCce-EEEEEEcCCccC--HHHHHHHHHHHHH-hCCCEEEEeeEE--CCEEEEEEEe
Confidence 889999999999987 78774 45565 444555432111 010 123555565 558887654333 2346899998
Q ss_pred -e-cCCHHHHHHHHHHHHHHHHH
Q 044773 230 -A-NMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 230 -~-~~~~e~l~~~l~~l~~~l~~ 250 (289)
. .+++++++.++++|++++++
T Consensus 473 ~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 473 LNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Confidence 3 36999999999999988765
No 200
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.68 E-value=1.4e-15 Score=138.31 Aligned_cols=211 Identities=12% Similarity=0.113 Sum_probs=131.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCc-cCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTV-FSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|+++ ||||...+ +++|.++|+++|+++|+|++|+.+. +++... .. . . .+.+.
T Consensus 129 ~~~~~v~~~---~~~G~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~-----------~-~-~~~~~ 186 (418)
T 2c81_A 129 DKTKAIIPV---HLFGSMAN---MDEINEIAQEHNLFVIEDCAQSHGSVWNNQRA---GT-----------I-G-DIGAF 186 (418)
T ss_dssp TTEEEECCB---CCTTCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TS-----------S-S-SEEEE
T ss_pred CCCeEEEEe---CCcCCccc---HHHHHHHHHHCCCEEEEECcccccCccCCEec---cc-----------c-c-ceEEE
Confidence 468887765 57998766 9999999999999999999999764 332211 11 1 1 26667
Q ss_pred cC--ccccCCCCceEEEEEecCHHHHHHHHhccccC-------------CC------C--------hHHHHHHHHHhCCc
Q 044773 89 SL--SKDLGLPGFRVGAIYSNDDTVVAAATKMSSFG-------------LV------S--------SQTQYLLSALLSDK 139 (289)
Q Consensus 89 s~--sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~-------------~~------~--------~~~q~~~~~~l~~~ 139 (289)
|| ||.+|. | |.||++++++.+.+.+......+ .. + ...+.++... .
T Consensus 187 s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~--~- 261 (418)
T 2c81_A 187 SCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLD--Q- 261 (418)
T ss_dssp ECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHH--H-
T ss_pred eccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHH--H-
Confidence 77 999985 8 99999997666555443221110 00 0 1112211111 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee-cCCc-eEEEE----EecCccccCCChhhHHHHHHHHHHhcCeE--
Q 044773 140 KFAQNYISENKKRLKQRHRKLVSGLEKA-GISCL-KSNA-GLFCW----VDMRHLLSSNTFEAEMELWKKIVYDVKLN-- 210 (289)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~-g~~~~----i~~~~~~~~~~~~~~~~~~~~ll~~~gi~-- 210 (289)
.+.+++..++.+++.+++.+.|.++ |+++. ++++ +...| +.+++.... . .+..++...|.+++||.
T Consensus 262 ---l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~~L~~~~gI~~~ 336 (418)
T 2c81_A 262 ---LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFG-G-LNADQFCEILREKLNMGTF 336 (418)
T ss_dssp ---HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTT-T-CCHHHHHHHHHHHHTCCTT
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccccc-c-cCHHHHHHHHHHcCCCCcc
Confidence 1124455566667788888999887 77776 4555 33222 566531000 0 12246778777555999
Q ss_pred -EeCCCCCCC---------------------------C-C------CCeEEEEEec-C-CHHHHHHHHHHHHHHHHHHH
Q 044773 211 -ISPGSSCHC---------------------------T-E------PGWFRVCFAN-M-SEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 211 -v~pg~~f~~---------------------------~-~------~~~~Ris~~~-~-~~e~l~~~l~~l~~~l~~~~ 252 (289)
+.++..... . + .+.+||++.. + +++|++.+++.|++++++..
T Consensus 337 ~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 337 YLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp TEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred cccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhc
Confidence 887752210 0 0 1589999954 7 89999999999999887543
No 201
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.67 E-value=1.9e-15 Score=140.97 Aligned_cols=218 Identities=9% Similarity=0.127 Sum_probs=142.3
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecC
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSL 90 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~ 90 (289)
++++|++++|+||||.+.+ +++|.++|+++|+++++|++|.+..+....... .+. +....++++.++
T Consensus 245 ~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~---~~~-------g~~~~D~i~~~~ 311 (504)
T 2okj_A 245 VPFYVNATAGTTVYGAFDP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRH---KLN-------GIERANSVTWNP 311 (504)
T ss_dssp EEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG---GGT-------TGGGCSEEEECT
T ss_pred CceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHh---hcC-------CcccCCEEEECc
Confidence 5889999999999999977 999999999999999999999876553322211 111 011334778899
Q ss_pred ccccCCCCceEEEEEecCHHH-HHHHHhccccCC----------------------CChHHHHHHHHHhCCchHHHHHHH
Q 044773 91 SKDLGLPGFRVGAIYSNDDTV-VAAATKMSSFGL----------------------VSSQTQYLLSALLSDKKFAQNYIS 147 (289)
Q Consensus 91 sK~~g~~G~r~G~i~~~~~~~-~~~~~~~~~~~~----------------------~~~~~q~~~~~~l~~~~~~~~~~~ 147 (289)
+|.++.| .++|+++++++.+ .........+.. .+.+.+.++..++. .+.++
T Consensus 312 hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg-----~~g~~ 385 (504)
T 2okj_A 312 HKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFE 385 (504)
T ss_dssp TSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH-----HHHHH
T ss_pred hhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh-----HHHHH
Confidence 9999845 6899999977543 332222221110 12455555544443 23467
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCceec---CCceEEEEEecCccccC--CC--h-----hhHHHHHHHHHHhcCe-EEeC
Q 044773 148 ENKKRLKQRHRKLVSGLEKA-GISCLK---SNAGLFCWVDMRHLLSS--NT--F-----EAEMELWKKIVYDVKL-NISP 213 (289)
Q Consensus 148 ~~~~~~~~~~~~l~~~l~~~-g~~~~~---~~~g~~~~i~~~~~~~~--~~--~-----~~~~~~~~~ll~~~gi-~v~p 213 (289)
+..++..++++++.+.|++. |+++.. |..+++++...+..... .. . ....++...|.++ |+ .+.+
T Consensus 386 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~ 464 (504)
T 2okj_A 386 NQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGY 464 (504)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEe
Confidence 77788889999999999887 788764 67777765544432100 00 0 0123466777655 75 4433
Q ss_pred CCCCCCCCCCeEEEEEe-c-CCHHHHHHHHHHHHHHHHH
Q 044773 214 GSSCHCTEPGWFRVCFA-N-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 214 g~~f~~~~~~~~Ris~~-~-~~~e~l~~~l~~l~~~l~~ 250 (289)
+. +. ...+++|++++ . +++++++.++++|++++++
T Consensus 465 ~~-~~-~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 465 QP-QG-DKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp EE-ET-TEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred eE-EC-CceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 22 21 11258999996 3 6899999999999887654
No 202
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.67 E-value=1.6e-15 Score=138.10 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=90.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITE--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
++++++ +++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|..... .. ++ ++
T Consensus 160 le~ai~--~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~~---p~-~~---------- 219 (415)
T 2fq6_A 160 IVKHLQ--PNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-FK---AL-DF---------- 219 (415)
T ss_dssp GGGGCC--TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-SC---GG-GG----------
T ss_pred HHHhhc--cCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-CC---cc-cc----------
Confidence 344444 46899999999999999998 8999999999 9999999999985311 11 11 12
Q ss_pred CCCceEEEecCccccCCCCce-EEEEEecCHHHHHHHHhccc-cCC-CChHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFR-VGAIYSNDDTVVAAATKMSS-FGL-VSSQTQYLLSALLSDKKFAQNYISENKKRLKQR 156 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r-~G~i~~~~~~~~~~~~~~~~-~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 156 (289)
+.++++.|+||.+|.+|.+ .||++++++. .+.+..... ++. .++.....+...+ +.+..+.+...++
T Consensus 220 --g~Div~~S~sK~lg~~g~~~~G~l~~~~~~-~~~l~~~~~~~G~~~~~~~a~~~~~~l-------~~l~~r~~~~~~n 289 (415)
T 2fq6_A 220 --GIDVSIQAATKYLVGHSDAMIGTAVCNARC-WEQLRENAYLMGQMVDADTAYITSRGL-------RTLGVRLRQHHES 289 (415)
T ss_dssp --TCSEEEEETTTTTTCSSSCCCEEEEECTTT-HHHHHHHHHHTTCCCCHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred --CCeEEEEeCccccCCCCCceEEEEEeCHHH-HHHHHHHHHhcCCCCCHHHHHHHHhhh-------hHHHHHHHHHHHH
Confidence 4568999999999877754 5999997654 333332222 222 2333232222222 2234445556677
Q ss_pred HHHHHHHHHhc
Q 044773 157 HRKLVSGLEKA 167 (289)
Q Consensus 157 ~~~l~~~l~~~ 167 (289)
.+.+.+.|++.
T Consensus 290 ~~~l~~~L~~~ 300 (415)
T 2fq6_A 290 SLKVAEWLAEH 300 (415)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHcC
Confidence 77788888765
No 203
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.67 E-value=2.4e-15 Score=139.61 Aligned_cols=212 Identities=14% Similarity=0.170 Sum_probs=138.3
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCcc
Q 044773 13 KGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLSK 92 (289)
Q Consensus 13 ~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~sK 92 (289)
.+|++++|+||||.+-+ +++|+++|+++|+++++|++|++..+..+.......- ..+.+.++.+++|
T Consensus 237 ~~vv~~~~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g----------~~~adsi~~~~hK 303 (486)
T 1js3_A 237 FFVVATLGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNG----------VEFADSFNFNPHK 303 (486)
T ss_dssp EEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTT----------GGGCSEEEECHHH
T ss_pred eEEEEeCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcC----------ccccCeeEEchhh
Confidence 48899999999998866 9999999999999999999998754432222221110 1122356788999
Q ss_pred ccCCCCceEEEEEecCHHH-HHHHHhcccc---------------------C-CCChHHHHHHHHHhCCchHHHHHHHHH
Q 044773 93 DLGLPGFRVGAIYSNDDTV-VAAATKMSSF---------------------G-LVSSQTQYLLSALLSDKKFAQNYISEN 149 (289)
Q Consensus 93 ~~g~~G~r~G~i~~~~~~~-~~~~~~~~~~---------------------~-~~~~~~q~~~~~~l~~~~~~~~~~~~~ 149 (289)
.++.| .++|+++++++.. .+.+.....+ + ....+.+.++...+. .+.+++.
T Consensus 304 ~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-----~~g~~~~ 377 (486)
T 1js3_A 304 WLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-----VKGLQAY 377 (486)
T ss_dssp HSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-----HHHHHHH
T ss_pred hcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-----HHHHHHH
Confidence 99855 8899999987653 3222100000 0 012344444444332 3446777
Q ss_pred HHHHHHHHHHHHHHHHhc-CCceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeE-EeCCCCCCCCCCCeEE
Q 044773 150 KKRLKQRHRKLVSGLEKA-GISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLN-ISPGSSCHCTEPGWFR 226 (289)
Q Consensus 150 ~~~~~~~~~~l~~~l~~~-g~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~-v~pg~~f~~~~~~~~R 226 (289)
.++..++++++.+.|.+. |+++.. |..+++.+ .+... + ....++...|.++ |+. +.++. + .+.+++|
T Consensus 378 ~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~-~----~~~~~l~~~L~~~-g~~~~~~~~-~--~~~~~lR 447 (486)
T 1js3_A 378 IRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCF-RLKGS-D----GLNEALLERINSA-RKIHLVPCR-L--RGQFVLR 447 (486)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEE-EESSC-H----HHHHHHHHHHHHH-TSCBCEEEE-E--TTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEE-EecCh-H----HHHHHHHHHHHhc-CCEEEEEEE-E--CCEEEEE
Confidence 888888999999999987 788764 66666554 44321 0 0114577777755 654 33332 2 2357899
Q ss_pred EEEec--CCHHHHHHHHHHHHHHHHHHHH
Q 044773 227 VCFAN--MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 227 is~~~--~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
+++.. +++++++.++++|++++++...
T Consensus 448 i~~~~~~~t~~di~~~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 448 FAICSRKVESGHVRLAWEHIRGLAAELLA 476 (486)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99843 5889999999999999887653
No 204
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.66 E-value=3.2e-15 Score=139.44 Aligned_cols=221 Identities=11% Similarity=-0.010 Sum_probs=142.3
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHc------CCEEEEecCCCCCcc---CCCCccChhhhhhccccccCCC
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEK------NIHLISDEIYSGTVF---SSPGFVSIMEILKDRNCENTEV 80 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~------~~~li~Dea~~~~~~---~~~~~~~~~~~~~~~~~~~~d~ 80 (289)
+++++|++++|+||||.+.+ +++|.++|+++ ++++++|++|.++.. .+.....+ ..
T Consensus 201 ~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~------------~~ 265 (502)
T 3hbx_A 201 ENTICVAAILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF------------RL 265 (502)
T ss_dssp TTEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST------------TS
T ss_pred hCCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc------------CC
Confidence 46889999999999999988 88899999998 999999999986531 11111111 12
Q ss_pred CCceEEEecCccccCCCCceEEEEEecCHHHH-HHHHhccccC-----------CCChHHHHHHHHHhCCchHHHHHHHH
Q 044773 81 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVV-AAATKMSSFG-----------LVSSQTQYLLSALLSDKKFAQNYISE 148 (289)
Q Consensus 81 ~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~-~~~~~~~~~~-----------~~~~~~q~~~~~~l~~~~~~~~~~~~ 148 (289)
.+.+++..|.+|.++ .+.++||++++++... ..+.....+. ..+.....++..++.... .+.+.+
T Consensus 266 ~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg--~~g~~~ 342 (502)
T 3hbx_A 266 PLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--HEGYRN 342 (502)
T ss_dssp TTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH--HHHHHH
T ss_pred CCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH--HHHHHH
Confidence 245677889999885 6677899988665432 2221111111 011112222222222111 233567
Q ss_pred HHHHHHHHHHHHHHHHHhcC-CceecC-CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeE
Q 044773 149 NKKRLKQRHRKLVSGLEKAG-ISCLKS-NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWF 225 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~g-~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~~ 225 (289)
..++..++.+++.+.|.+++ +++..+ ....++.++++.... .+..++...|. +.||.+....... ..+..++
T Consensus 343 ~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~----~~~~~l~~~L~-~~Gi~v~~~~~p~~~~~~~~l 417 (502)
T 3hbx_A 343 VMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSC----HTEFEISDMLR-RYGWIVPAYTMPPNAQHITVL 417 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSS----CCHHHHHHHHH-TTTCBCCEEECCTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCc----CCHHHHHHHHH-hCCcEEeeccCCcccCCceEE
Confidence 77888888899999999984 887765 333455566654211 12235777765 6799875332221 1234689
Q ss_pred EEEEec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 226 RVCFAN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 226 Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
||++.. ++.++++.+++.|+++++...+
T Consensus 418 Risv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 418 RVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999964 7899999999999999987654
No 205
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.66 E-value=2.2e-15 Score=138.06 Aligned_cols=204 Identities=14% Similarity=0.088 Sum_probs=129.7
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecC-CCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEI-YSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
++++++|++++| ||||.+.+ +++|.++|+++|+++++|-. ++ ++... ...++ +.++++
T Consensus 194 ~~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a---~g~~~--~~~~~------------g~D~~~ 252 (438)
T 1wyu_A 194 GEEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLS---LGVLK--PPGAY------------GADIAV 252 (438)
T ss_dssp CTTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTG---GGTBC--CHHHH------------TCSEEE
T ss_pred CCCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhh---ccCcC--CCccC------------CCCEEE
Confidence 357899999999 99999997 99999999999999997632 32 11111 11122 334666
Q ss_pred ecCccccC----CCCceEEEEEecCHHHHHHHH----------------------------hccccCCC---ChHHHHHH
Q 044773 88 YSLSKDLG----LPGFRVGAIYSNDDTVVAAAT----------------------------KMSSFGLV---SSQTQYLL 132 (289)
Q Consensus 88 ~s~sK~~g----~~G~r~G~i~~~~~~~~~~~~----------------------------~~~~~~~~---~~~~q~~~ 132 (289)
+| +|.|| +.|.++||++++++.+ +.+. ........ +.+....+
T Consensus 253 ~s-~kk~~~~~~~~Gp~~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~a 330 (438)
T 1wyu_A 253 GD-GQSLGLPMGFGGPHFGFLATKKAFV-RQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMG 330 (438)
T ss_dssp EE-CTTTTCCCGGGCSCCEEEEECGGGG-GGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHH
T ss_pred EC-CcccCCCccCCCCCeeEEEEcHHHH-HhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHH
Confidence 66 66543 3456899999965433 2221 00111111 11222111
Q ss_pred HHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEE
Q 044773 133 SALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNI 211 (289)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 211 (289)
+.++.... ...+++..++++++++++.+.|++. |+++..+.. ++.++.+.... +..++...|. ++||.+
T Consensus 331 a~~l~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~~~~~~~~~~~------~~~~~~~~L~-~~gi~v 400 (438)
T 1wyu_A 331 AMYLAALG--PEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKP-FFNEFALALPK------DPEAVRRALA-ERGFHG 400 (438)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSS-BCSEEEEECSS------CHHHHHHHHH-HTTCCC
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCC-eEEEEEEeCCC------CHHHHHHHHH-HCCcee
Confidence 21132211 3346778888999999999999998 888876543 33222222111 2246888877 559998
Q ss_pred --eCCCCCCCCCCCeEEEEEec-CCHHHHHHHHHHHHHHH
Q 044773 212 --SPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 212 --~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 248 (289)
.++..|+ ++++||++.. ++++++++++++|++++
T Consensus 401 ~~~~~~~~~---~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 401 ATPVPREYG---ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CEECCTTSC---SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred ccccccccC---CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 7777664 5799999964 68999999999998764
No 206
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.64 E-value=1.2e-14 Score=129.79 Aligned_cols=204 Identities=8% Similarity=0.041 Sum_probs=130.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|++++| ||.+.+ +++|.++|+++|+++|+|++|+....... . .+. ... ++.+.|
T Consensus 120 ~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~----~~~--------~~~-~i~~~s 178 (375)
T 2fnu_A 120 ERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLSDSSHALGSEYQN--K----KVG--------GFA-LASVFS 178 (375)
T ss_dssp TTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEETT--E----ETT--------SSS-SEEEEE
T ss_pred cCceEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEEECccccCCeECC--e----ecc--------ccC-CeEEEe
Confidence 46888888876 999988 89999999999999999999985322111 0 111 112 377788
Q ss_pred Cc--cccCCCCceEEEEEe-cCHHHHHHHHhcccc---------------C---CCChHHHHHHHHHhCCchHHHHHHHH
Q 044773 90 LS--KDLGLPGFRVGAIYS-NDDTVVAAATKMSSF---------------G---LVSSQTQYLLSALLSDKKFAQNYISE 148 (289)
Q Consensus 90 ~s--K~~g~~G~r~G~i~~-~~~~~~~~~~~~~~~---------------~---~~~~~~q~~~~~~l~~~~~~~~~~~~ 148 (289)
+| |.+| +| +|++++ +++.+.+.+...... . ..+++...+....+ +.+++
T Consensus 179 ~s~~K~~~-~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-------~~~~~ 248 (375)
T 2fnu_A 179 FHAIKPIT-TA--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQL-------KKAPF 248 (375)
T ss_dssp CCTTSSSC-CS--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHH-------TTHHH
T ss_pred CCCCCCcc-cc--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHH-------HHHHH
Confidence 88 9997 46 688887 446565544433211 1 12222222211111 22456
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCceecC----C-ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCC--
Q 044773 149 NKKRLKQRHRKLVSGLEKA-GISCLKS----N-AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-- 220 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~-g~~~~~~----~-~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-- 220 (289)
..++.+++++++.+.|+++ |+++..+ . .+++.++.++.... .+..++...|. ++||.+..+ |.+.
T Consensus 249 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~-~~gi~v~~~--~~p~~~ 321 (375)
T 2fnu_A 249 LMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFF----TCKKLILESLH-KRGILAQVH--YKPIYQ 321 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGG----GGHHHHHHHHH-HTTEECBCC--CCCGGG
T ss_pred HHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcccc----chHHHHHHHHH-HCCCCcccc--cccccc
Confidence 6777888899999999987 7776554 1 23445666653200 02345777775 679998832 2110
Q ss_pred -------------------CCCeEEEEEec-CCHHHHHHHHHHHHHHHHHH
Q 044773 221 -------------------EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 221 -------------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 251 (289)
..+++||+++. +++++++.++++|++++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 322 YQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp SHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 02579999964 68999999999999988754
No 207
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.64 E-value=2.9e-15 Score=133.91 Aligned_cols=205 Identities=11% Similarity=0.119 Sum_probs=125.5
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCcc-CCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVF-SSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|+.... .+.... ...++++.
T Consensus 124 ~~~~~v~---~~n~~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~----------------~~~d~~~~ 181 (374)
T 3uwc_A 124 DKTKAIM---PVHYTGNIAD---MPALAKIAKKHNLHIVEDACQTILGRINDKFVG----------------SWGQFACF 181 (374)
T ss_dssp TTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEETT----------------SSSSEEEE
T ss_pred CCceEEE---EeCCcCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCCeecc----------------ccccEEEE
Confidence 3577765 8999999988 89999999999999999999985322 111110 01246677
Q ss_pred cCc--cccCCCCceEEEEEecCHHHHHHHHhcccc-----------C---CCChHHHHHHHHHhCCchHHHHHHHHHHHH
Q 044773 89 SLS--KDLGLPGFRVGAIYSNDDTVVAAATKMSSF-----------G---LVSSQTQYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 89 s~s--K~~g~~G~r~G~i~~~~~~~~~~~~~~~~~-----------~---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
|+| |.++.+|. .|+++++++.+.+.+...... . ..+.+...+....+. . +++..++
T Consensus 182 s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~--~-----~~~~~~~ 253 (374)
T 3uwc_A 182 SLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMN--Q-----LETITEK 253 (374)
T ss_dssp ECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGG--G-----HHHHHHH
T ss_pred eCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHH--H-----HHHHHHH
Confidence 766 99984365 799999877776655543211 0 012222222211111 1 3445566
Q ss_pred HHHHHHHHHHHHHhcC--Cceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC----------
Q 044773 153 LKQRHRKLVSGLEKAG--ISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC---------- 219 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g--~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---------- 219 (289)
.+++.+++.+.|.+.+ +++.. +.++...|..+.-... +..++...|. ++||.+.++.....
T Consensus 254 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~~~~~~ 327 (374)
T 3uwc_A 254 RRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK-----YRDQLFQYLK-DNGIEVKIHYPIAMHLQPAAKSLG 327 (374)
T ss_dssp HHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET-----THHHHHHHHH-HTTBCCBCSCSSCGGGSGGGGGGC
T ss_pred HHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC-----CHHHHHHHHH-HCCCccccCCCCccccChhhhhcC
Confidence 6677778888888774 54432 2322222211111111 1245666665 66999998752110
Q ss_pred -C----------CCCeEEEEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 220 -T----------EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 220 -~----------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
. ..+.+||++.. ++++|++.+++.|++++++
T Consensus 328 ~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 328 YQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp CCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 0 01679999954 7999999999999998865
No 208
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.64 E-value=3.8e-15 Score=135.87 Aligned_cols=84 Identities=19% Similarity=0.160 Sum_probs=66.8
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCC
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWN 82 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 82 (289)
++++. +++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|..+.+.+.. ..+ +
T Consensus 138 ~~~i~--~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~~~----~~~------------~ 196 (421)
T 2ctz_A 138 LALTD--EKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLLRP----LAW------------G 196 (421)
T ss_dssp HHHCC--TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSCCG----GGG------------T
T ss_pred HHhhc--cCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccccccCCc----ccc------------C
Confidence 44443 47899999999999999999 999999999999999999999323232221 112 3
Q ss_pred ceEEEecCccccCCCCceEEEEEec
Q 044773 83 RVHIVYSLSKDLGLPGFRVGAIYSN 107 (289)
Q Consensus 83 ~~i~i~s~sK~~g~~G~r~G~i~~~ 107 (289)
.++++.|+||.++.+|.++|++++.
T Consensus 197 ~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 197 AALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred CeEEEECCcccccCCCCcEEEEEEe
Confidence 4588999999999889999998885
No 209
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.63 E-value=2.6e-15 Score=135.27 Aligned_cols=204 Identities=13% Similarity=0.097 Sum_probs=125.0
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|+........ .... ..+ +.+.|
T Consensus 143 ~~~~~v~---~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~--~~~~-----------~~d--i~~~S 201 (391)
T 3dr4_A 143 PRTKAIM---PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRGK--KSGS-----------LGD--CATFS 201 (391)
T ss_dssp TTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE--ETTS-----------SSS--EEEEE
T ss_pred CCceEEE---EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECCe--eecc-----------cCC--EEEEE
Confidence 4677766 5689999887 899999999999999999999843221111 0000 112 55666
Q ss_pred Cc--cccCCCCceEEEEEecCHHHHHHHHhccccC----------------CCChHHHHHHHHHhCCchHHHHHHHHHHH
Q 044773 90 LS--KDLGLPGFRVGAIYSNDDTVVAAATKMSSFG----------------LVSSQTQYLLSALLSDKKFAQNYISENKK 151 (289)
Q Consensus 90 ~s--K~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~----------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 151 (289)
|| |.++ |.+.|+++++++.+.+.+......+ ..+.+... ..+.. ...+++..+
T Consensus 202 ~s~~K~l~--~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa--~~~~~-----~~~~~~~~~ 272 (391)
T 3dr4_A 202 FFGNAIIT--TGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAA--IGLAQ-----LERVDEHLA 272 (391)
T ss_dssp CBTTSSSC--CBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHH--HHHHH-----HHTHHHHHH
T ss_pred CCCCCcCC--cCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHH--HHHHH-----HHHHHHHHH
Confidence 55 8775 3568999998777766554332111 11222221 12111 122345556
Q ss_pred HHHHHHHHHHHHHHhcCCceecC------Cce-EEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCC---CCC-
Q 044773 152 RLKQRHRKLVSGLEKAGISCLKS------NAG-LFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSC---HCT- 220 (289)
Q Consensus 152 ~~~~~~~~l~~~l~~~g~~~~~~------~~g-~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f---~~~- 220 (289)
+.+++.+++.+.|.+.|+++..+ ..+ +.+++.++... . .+..++...|. ++||.+.++... .+.
T Consensus 273 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-~---~~~~~l~~~L~-~~GI~v~~~~~p~~~~~~~ 347 (391)
T 3dr4_A 273 ARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGL-S---TTRDQVIKDLD-ALGIESRPVFHPMHIMPPY 347 (391)
T ss_dssp HHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSC-S---SCHHHHHHHHH-HTTCCCEECCCCGGGSGGG
T ss_pred HHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCcc-c---hhHHHHHHHHH-HCCCceeecCCccccChhh
Confidence 66777778888888777776554 122 23456665411 1 12245777766 569999987521 000
Q ss_pred --------------CCCeEEEEEec-CCHHHHHHHHHHHHHHH
Q 044773 221 --------------EPGWFRVCFAN-MSEDTLKLSMQRLKAFV 248 (289)
Q Consensus 221 --------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 248 (289)
....+||++.. ++++|++.++++|++++
T Consensus 348 ~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 348 AHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp GGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred hhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 13579999954 79999999999998753
No 210
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.62 E-value=3.2e-14 Score=133.08 Aligned_cols=218 Identities=16% Similarity=0.181 Sum_probs=135.7
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecC
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSL 90 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~ 90 (289)
++++|++++|+||||.+.+ +++|.++|+++|+++++|++|++..+..+.... .+. +..+.++++.|+
T Consensus 259 ~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~---~~~-------g~~~aD~v~~s~ 325 (515)
T 2jis_A 259 VPFLVSATSGTTVLGAFDP---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH---LLD-------GIQRADSVAWNP 325 (515)
T ss_dssp EEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG---GGT-------TGGGCSEEEECT
T ss_pred CcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHh---hcC-------CCccCCEEEECc
Confidence 5889999999999999988 999999999999999999999876554332211 111 011345888999
Q ss_pred ccccCCCCceEEEEEecCH--HHHHHHHhccccC------------------C----CChHHHHHHHHHhCCchHHHHHH
Q 044773 91 SKDLGLPGFRVGAIYSNDD--TVVAAATKMSSFG------------------L----VSSQTQYLLSALLSDKKFAQNYI 146 (289)
Q Consensus 91 sK~~g~~G~r~G~i~~~~~--~~~~~~~~~~~~~------------------~----~~~~~q~~~~~~l~~~~~~~~~~ 146 (289)
+|.++ .+.++|+++++++ .+.........+. . ...+.+.++..++. ...+
T Consensus 326 hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg-----~~g~ 399 (515)
T 2jis_A 326 HKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG-----DQGL 399 (515)
T ss_dssp TSTTC-CCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH-----HHHH
T ss_pred ccccC-CCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh-----HHHH
Confidence 99997 3467999999876 3333211010000 0 11333444433442 2336
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCceec-CCceEEEEEecCcccc----CCChhhH-----HHHHHHHHHhcCeEEeCCC
Q 044773 147 SENKKRLKQRHRKLVSGLEKA-GISCLK-SNAGLFCWVDMRHLLS----SNTFEAE-----MELWKKIVYDVKLNISPGS 215 (289)
Q Consensus 147 ~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~g~~~~i~~~~~~~----~~~~~~~-----~~~~~~ll~~~gi~v~pg~ 215 (289)
++..++..++++++.+.|++. |+++.. +..+.+.+...+.... ...+... ..+...+. +.|+.+....
T Consensus 400 ~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~-~~G~~~~~~~ 478 (515)
T 2jis_A 400 ERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV-KEGSMMIGYQ 478 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH-HHTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEE
Confidence 677788889999999999987 787765 4445555433333211 1111111 12455555 4476542110
Q ss_pred CCCCCCCCeEEEEEe-c-CCHHHHHHHHHHHHHHHH
Q 044773 216 SCHCTEPGWFRVCFA-N-MSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 216 ~f~~~~~~~~Ris~~-~-~~~e~l~~~l~~l~~~l~ 249 (289)
.. ....+++|++++ . +++++++.++++|+++++
T Consensus 479 ~~-~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 479 PH-GTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp EE-TTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EE-CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 00 011358999994 3 699999999999988764
No 211
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.61 E-value=2e-14 Score=134.25 Aligned_cols=219 Identities=10% Similarity=0.142 Sum_probs=137.6
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCc
Q 044773 12 VKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLS 91 (289)
Q Consensus 12 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~s 91 (289)
+++|++++|+||+|.+-+ +++|+++|+++|+++++|++|++..+..+.... .+. +...-+.++.+++
T Consensus 249 ~~~vv~~~~~~~~G~vd~---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~---~~~-------g~~~aDsv~~~~h 315 (511)
T 3vp6_A 249 PFYVNATAGTTVYGAFDP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRH---KLN-------GIERANSVTWNPH 315 (511)
T ss_dssp EEEEEEEBSCSSSCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG---GGT-------TGGGCSEEEECTT
T ss_pred cEEEEEecCCCCCccccc---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhh---hcc-------CCccCCEEEECcc
Confidence 789999999999999966 999999999999999999999875443322111 111 0113357788999
Q ss_pred cccCCCCceEEEEEecCHHHHHHH-HhccccCC----------------------CChHHHHHHHHHhCCchHHHHHHHH
Q 044773 92 KDLGLPGFRVGAIYSNDDTVVAAA-TKMSSFGL----------------------VSSQTQYLLSALLSDKKFAQNYISE 148 (289)
Q Consensus 92 K~~g~~G~r~G~i~~~~~~~~~~~-~~~~~~~~----------------------~~~~~q~~~~~~l~~~~~~~~~~~~ 148 (289)
|.++.| ..+|+++++++.+.... .....+.. ...+...++..++. .+.+++
T Consensus 316 K~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g-----~~gl~~ 389 (511)
T 3vp6_A 316 KMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFEN 389 (511)
T ss_dssp STTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHH-----HHHHHH
T ss_pred cccCCC-cCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHh-----HHHHHH
Confidence 999845 67899998776544332 21111110 11222333333331 455788
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCceec---CCceEEEEEecCccccCC--Chh-------hHHHHHHHHHHhcCeEEeCCC
Q 044773 149 NKKRLKQRHRKLVSGLEKA-GISCLK---SNAGLFCWVDMRHLLSSN--TFE-------AEMELWKKIVYDVKLNISPGS 215 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~-g~~~~~---~~~g~~~~i~~~~~~~~~--~~~-------~~~~~~~~ll~~~gi~v~pg~ 215 (289)
+.++..++.+++.+.|++. |+++.. |..+++.|.-.+...... ... ...++...|.++ |+.+.. .
T Consensus 390 ~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~-~ 467 (511)
T 3vp6_A 390 QINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVG-Y 467 (511)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEE-E
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEE-E
Confidence 8889999999999999987 888765 566665543333322110 000 012466777755 654432 1
Q ss_pred CCCCCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHHH
Q 044773 216 SCHCTEPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 216 ~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~ 251 (289)
.+...+.+++|+++++ ++.++++.+++.|+++-+..
T Consensus 468 ~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 468 QPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp EEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1111223579999942 68999999999887765543
No 212
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.61 E-value=1.2e-14 Score=134.58 Aligned_cols=214 Identities=13% Similarity=0.115 Sum_probs=139.6
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCc
Q 044773 12 VKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLS 91 (289)
Q Consensus 12 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~s 91 (289)
+.+|+++.++|+||.+-+ +++|+++|+++|+++++|.+|....+....... .+. +....+.+..+++
T Consensus 235 ~~~v~~~~~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~---~~~-------gi~~~Ds~~~~~h 301 (475)
T 3k40_A 235 PFYAVVTLGTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRH---LMK-------GIESADSFNFNPH 301 (475)
T ss_dssp EEEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGG---GGT-------TGGGCSEEEECHH
T ss_pred cEEEEEEecCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHH---Hhc-------CcccCCEEEECch
Confidence 677899999999999877 999999999999999999999864332222111 111 0112357789999
Q ss_pred cccCCCCceEEEEEecCHHH-HHHHHhccccC----------------CCC----hHHHHHHHHHhCCchHHHHHHHHHH
Q 044773 92 KDLGLPGFRVGAIYSNDDTV-VAAATKMSSFG----------------LVS----SQTQYLLSALLSDKKFAQNYISENK 150 (289)
Q Consensus 92 K~~g~~G~r~G~i~~~~~~~-~~~~~~~~~~~----------------~~~----~~~q~~~~~~l~~~~~~~~~~~~~~ 150 (289)
|.++.| ..+|++++++... .+.+.....+. ..+ .+.+.++...+. .+.+++..
T Consensus 302 K~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g-----~~g~~~~~ 375 (475)
T 3k40_A 302 KWMLVN-FDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG-----VENLQAHI 375 (475)
T ss_dssp HHSSCC-SSCEEEEESSGGGC---------------------------CCCGGGTHHHHHHHHHHHH-----HHHHHHHH
T ss_pred hccCCC-CceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh-----HHHHHHHH
Confidence 998733 5678888876543 22221111110 011 122222222222 33467778
Q ss_pred HHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEE
Q 044773 151 KRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 229 (289)
Q Consensus 151 ~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~ 229 (289)
++..++.+++.+.|++. |+++..+....++++++.... ....++...|.++.++.+.|+..++ ..++|+++
T Consensus 376 ~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~-----~~~~~l~~~L~~~g~~~~~~~~~~g---~~~lR~~~ 447 (475)
T 3k40_A 376 RRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSN-----ERNEALLKRINGRGHIHLVPAKIKD---VYFLRMAI 447 (475)
T ss_dssp HHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCH-----HHHHHHHHHHHHHTSCBCEEEEETT---EEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCch-----HHHHHHHHHHHhCCcEEEEeeEECC---EEEEEEEe
Confidence 88999999999999988 888876554445566664311 1235688888877666666654433 57899998
Q ss_pred ec--CCHHHHHHHHHHHHHHHHHHH
Q 044773 230 AN--MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 230 ~~--~~~e~l~~~l~~l~~~l~~~~ 252 (289)
.+ +++++++.++++|+++.++..
T Consensus 448 ~~~~tt~~di~~~~~~i~~~~~~~~ 472 (475)
T 3k40_A 448 CSRFTQSEDMEYSWKEVSAAADEME 472 (475)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 64 489999999999999987654
No 213
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.59 E-value=3.4e-14 Score=130.19 Aligned_cols=222 Identities=17% Similarity=0.139 Sum_probs=128.9
Q ss_pred hHHHhhhCCCccEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHLKVKGVLVTNP-SNPLGT-TMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p-~NPtG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++.++.+--+.++..| ....|. ..+++.+++|.++|++||+++|+||++.+ ..|..+. .+..
T Consensus 210 l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a--~e~~--------- 276 (454)
T 4ao9_A 210 ARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGL--ANKL--------- 276 (454)
T ss_dssp HHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCH--HHHH---------
T ss_pred HHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccc--hhcc---------
Confidence 4566666533333455567 544564 45688999999999999999999999984 4444322 2221
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh------ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK------MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRL 153 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 153 (289)
+....+.+++|.+| .|+++|.++++ +.+.+.+.. ..+.+..|++...+..+.|+...- ++ ..+++
T Consensus 277 --gv~PDi~t~gK~lg-gG~Piga~~~~-~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~-~~----~~~~~ 347 (454)
T 4ao9_A 277 --GIRSDLTTLGKYIG-GGMSFGAFGGR-ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT-PE----AAGAL 347 (454)
T ss_dssp --TCCCSEEEEEGGGG-TTSSCEEEEEC-HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC-HH----HHHHH
T ss_pred --CCCCcEEEeccccC-CCCcceeeeeH-HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc-cC----hhHHH
Confidence 12223567899998 88999999995 455544421 112233678777776666542211 12 22333
Q ss_pred HHHHHHHHHHHH----hcCCceecCCceEEEEEecCccc-c------CCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 044773 154 KQRHRKLVSGLE----KAGISCLKSNAGLFCWVDMRHLL-S------SNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 222 (289)
Q Consensus 154 ~~~~~~l~~~l~----~~g~~~~~~~~g~~~~i~~~~~~-~------~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 222 (289)
+++.++|.+.|+ +.++......-|..+.+.+.+.. . .....-...+...|+ +.||.+.|.
T Consensus 348 ~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~-------- 418 (454)
T 4ao9_A 348 AERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPR-------- 418 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTT--------
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCC--------
Confidence 333344444443 33432221111233334443210 0 001111234566666 569998763
Q ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHHHHHhh
Q 044773 223 GWFRVCFANMSEDTLKLSMQRLKAFVDSITTTL 255 (289)
Q Consensus 223 ~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~~~ 255 (289)
+++.+++. ++++|+|++++++.+++.+....+
T Consensus 419 ~~~~~s~~-~T~~dId~~l~al~~~l~~~~a~l 450 (454)
T 4ao9_A 419 GFVVLSLP-LTDADIDRYVAAIGSFIGGHGALL 450 (454)
T ss_dssp CEEECCTT-CCHHHHHHHHHHHHHHHHHSGGGS
T ss_pred CCEEEeCC-CCHHHHHHHHHHHHHHHHhccccC
Confidence 34455555 699999999999999999876543
No 214
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.58 E-value=1.4e-13 Score=124.22 Aligned_cols=218 Identities=13% Similarity=0.073 Sum_probs=127.9
Q ss_pred hHHHhhhCC-CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCC-CCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHL-KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYS-GTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~-~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
+++++...+ ++++|++++ |||...+ +++|.++|+++|+++|+|++|+ +..+.+....+
T Consensus 112 l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~-------------- 171 (394)
T 1o69_A 112 LKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKENDIVLIEDAAEALGSFYKNKALGT-------------- 171 (394)
T ss_dssp HHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS--------------
T ss_pred HHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCEEEEECcCcccceeCCccccc--------------
Confidence 345555432 589988885 7997666 9999999999999999999998 44443221111
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccCC----------------CChHHHHHHHHHhCCchHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGL----------------VSSQTQYLLSALLSDKKFAQ 143 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~----------------~~~~~q~~~~~~l~~~~~~~ 143 (289)
..+.++...|.+|.+ +|.++||++++++.+.+.+......+. .+++...+....++
T Consensus 172 ~~~~~~~s~s~~K~l--~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~------ 243 (394)
T 1o69_A 172 FGEFGVYSYNGNKII--TTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQME------ 243 (394)
T ss_dssp SSSEEEEECCTTSSS--CCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHT------
T ss_pred ccCcEEEEEeCCccC--CCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHH------
Confidence 113334444446766 456899999976666555544322210 11122211111122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCceecCC----ceE-EEEEecCccc---------------cCCChhhHHHHHHHH
Q 044773 144 NYISENKKRLKQRHRKLVSGLEKAGISCLKSN----AGL-FCWVDMRHLL---------------SSNTFEAEMELWKKI 203 (289)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~-~~~i~~~~~~---------------~~~~~~~~~~~~~~l 203 (289)
++++..++++++++++.+.|.+. +++.++. +++ .+++.++... ....-.+..++...|
T Consensus 244 -~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 321 (394)
T 1o69_A 244 -VLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDL 321 (394)
T ss_dssp -THHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHH
Confidence 24456677888888899999876 5554432 233 3556665311 000001334577776
Q ss_pred HHhcCeEEeCCCCCC---CCCC---------------CeEEEEE-ecCCHHHHHHHHHHHHHHHHH
Q 044773 204 VYDVKLNISPGSSCH---CTEP---------------GWFRVCF-ANMSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 204 l~~~gi~v~pg~~f~---~~~~---------------~~~Ris~-~~~~~e~l~~~l~~l~~~l~~ 250 (289)
. ++||.+.++..+. +.-. ..+|+.+ ..++++|++.+++.|+++++.
T Consensus 322 ~-~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 322 K-NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp H-HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred H-HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 5 6799999985431 1000 2344444 337999999999999887654
No 215
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.57 E-value=4.3e-14 Score=131.08 Aligned_cols=214 Identities=12% Similarity=0.091 Sum_probs=141.5
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCc
Q 044773 12 VKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLS 91 (289)
Q Consensus 12 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~s 91 (289)
+.+|+++.++|+||.+-+ +++|+++|+++|+++++|.+|.+..+..........- ....+.+..+++
T Consensus 242 ~~~vv~~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~g----------i~~aDsi~~~~h 308 (481)
T 4e1o_A 242 PVFVCATLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKG----------IEYADSFTFNPS 308 (481)
T ss_dssp EEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTT----------GGGCSEEEECHH
T ss_pred cEEEEEecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcC----------cccCCEEEEChH
Confidence 677899999999998866 9999999999999999999998654332222111111 112246778999
Q ss_pred cccCCCCceEEEEEecCHHHHH-HHHhccccC-----------------C---CChHHHHHHHHHhCCchHHHHHHHHHH
Q 044773 92 KDLGLPGFRVGAIYSNDDTVVA-AATKMSSFG-----------------L---VSSQTQYLLSALLSDKKFAQNYISENK 150 (289)
Q Consensus 92 K~~g~~G~r~G~i~~~~~~~~~-~~~~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~ 150 (289)
|.++.| ..+|+++++++.... .+.....+. . ...+.+.++...+. .+.+++..
T Consensus 309 K~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g-----~~g~~~~~ 382 (481)
T 4e1o_A 309 KWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG-----VKNLQAHV 382 (481)
T ss_dssp HHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH-----HHHHHHHH
T ss_pred HhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH-----HHHHHHHH
Confidence 999855 557888887765432 111111110 0 11233343333332 34467778
Q ss_pred HHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEE
Q 044773 151 KRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 229 (289)
Q Consensus 151 ~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~ 229 (289)
++..++++++.+.|++. |+++..+....++++++.... ....++...+.++..+.+.|+... +..++|+++
T Consensus 383 ~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-----~~~~~l~~~L~~~g~~~~~~~~~~---g~~~lR~~~ 454 (481)
T 4e1o_A 383 RHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPN-----SLTENVLKEIAKAGRLFLIPATIQ---DKLIIRFTV 454 (481)
T ss_dssp HHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCH-----HHHHHHHHHHHHHCSSBCEEEEET---TEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCch-----HHHHHHHHHHHhCCeEEEEeeEEC---CEEEEEEEe
Confidence 88999999999999987 888876555456667765311 122467888876644555554432 346899998
Q ss_pred ec--CCHHHHHHHHHHHHHHHHHHH
Q 044773 230 AN--MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 230 ~~--~~~e~l~~~l~~l~~~l~~~~ 252 (289)
.. +++++++.++++|+++.++..
T Consensus 455 ~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 455 TSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 54 478999999999999887653
No 216
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.57 E-value=2.8e-14 Score=127.66 Aligned_cols=205 Identities=14% Similarity=0.199 Sum_probs=120.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCc-cCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTV-FSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|+ |+||||...+ +++|.++|+++|+++|+|++|+... +++.. + ....++.+.
T Consensus 123 ~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~------~----------~~~~d~~~~ 180 (373)
T 3frk_A 123 EKTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIEDAAQAHGSLYKGMK------V----------GSLGDAAGF 180 (373)
T ss_dssp TTEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEETTEE------T----------TSSSSEEEE
T ss_pred CCCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEECCcccCCEECCEe------c----------cccccEEEE
Confidence 3677766 6789999888 8899999999999999999998432 21111 1 001236778
Q ss_pred cCc--cccCCCCceEEEEEecCHHHHHHHHhccccC--------------CCChHHHHHHHHHhCCchHHHHHHHHHHHH
Q 044773 89 SLS--KDLGLPGFRVGAIYSNDDTVVAAATKMSSFG--------------LVSSQTQYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 89 s~s--K~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~--------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
||+ |.+|..|. .|+++++++.+.+.+......+ ..+.+...+....++ .+++..++
T Consensus 181 S~~~~K~l~~~g~-gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~-------~~~~~~~~ 252 (373)
T 3frk_A 181 SFYPAKNLGSLGD-GGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLK-------YLDKWNEE 252 (373)
T ss_dssp ECCTTSSSCCSSS-CEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHH-------THHHHHHH
T ss_pred eCcCCCccCccce-eEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHH-------HHHHHHHH
Confidence 876 99973253 6999998776665554332211 012222222222121 23445566
Q ss_pred HHHHHHHHHHHHHhcCCceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC--C---------
Q 044773 153 LKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC--T--------- 220 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~--------- 220 (289)
.+++.+++.+.|.+.++.+.. +.++...|..+.-... +..++...|. +.||.+.++..... .
T Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~ 326 (373)
T 3frk_A 253 RRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE-----KRDELQKYLN-NNGIGTLIHYPIPIHLQQAYKDLGFK 326 (373)
T ss_dssp HHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES-----SHHHHHHHHH-HTTBCCBCSCSSCGGGSGGGGGGCCC
T ss_pred HHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC-----CHHHHHHHHH-HCCCCcccCcCCccccChHHHhcCCC
Confidence 667777788888776533321 1222221111111111 1245666665 66999987652111 0
Q ss_pred ----C------CCeEEEEEec-CCHHHHHHHHHHHHHHHHH
Q 044773 221 ----E------PGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 221 ----~------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
+ .+.+|+++.. ++++|++.+++.|+++..+
T Consensus 327 ~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 327 TGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp TTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred CCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 0 1579999954 8999999999999876544
No 217
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.56 E-value=8.3e-14 Score=134.62 Aligned_cols=219 Identities=11% Similarity=-0.025 Sum_probs=128.5
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC-ccCCCCc-cChhhhhhccccccCCCCCceEEEecC
Q 044773 13 KGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGT-VFSSPGF-VSIMEILKDRNCENTEVWNRVHIVYSL 90 (289)
Q Consensus 13 ~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~-~~~~~~~~~~~~~~~d~~~~~i~i~s~ 90 (289)
|++++++| ||+|.+.+ +++|+++|+++++++++|++|... .+.+... .+.... .+. +. ...+++++.|+
T Consensus 283 klviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~-~~~---g~-D~~~~iv~~S~ 353 (730)
T 1c4k_A 283 RLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLI-DDL---GP-EDPGIIVVQSV 353 (730)
T ss_dssp SEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSC-CCC---CT-TSCEEEEEECH
T ss_pred eEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccc-ccc---CC-CCCCEEEEECC
Confidence 89999999 58999988 999999999999999999999753 2321110 011110 000 00 12467999999
Q ss_pred ccccCCCCce-EEEEEecCHHH--------HHHHHhc---cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Q 044773 91 SKDLGLPGFR-VGAIYSNDDTV--------VAAATKM---SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHR 158 (289)
Q Consensus 91 sK~~g~~G~r-~G~i~~~~~~~--------~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (289)
||+++ |++ .|+++++++.+ ...+... .....++.....++..++.... .....+..+.+.++.+
T Consensus 354 hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~--~~~g~~~~~~~~~~a~ 429 (730)
T 1c4k_A 354 HKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQE--GEAGRKLWHDLLITTI 429 (730)
T ss_dssp HHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHH
T ss_pred CCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHH
Confidence 99985 332 36675654432 1122211 1112234343333333333111 1123445566777778
Q ss_pred HHHHHHHh-c-CCceecCCc-------------------------------------e-EE-----EEEecCcc------
Q 044773 159 KLVSGLEK-A-GISCLKSNA-------------------------------------G-LF-----CWVDMRHL------ 187 (289)
Q Consensus 159 ~l~~~l~~-~-g~~~~~~~~-------------------------------------g-~~-----~~i~~~~~------ 187 (289)
++++.|.+ . |+++..+.. + ++ +.+.++..
T Consensus 430 ~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~ 509 (730)
T 1c4k_A 430 EARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGD 509 (730)
T ss_dssp HHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTE
T ss_pred HHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCccccccc
Confidence 88888887 3 777654421 1 11 34444320
Q ss_pred ccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHH
Q 044773 188 LSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 188 ~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 252 (289)
..... .+...+...|. ++||.+.+. +...+|+++.. +++++++.+++.|+++.+.+.
T Consensus 510 ~~~~g-~~~~~l~~~L~-e~GI~v~~~------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 510 YEDFG-VPATIVANYLR-DHGIIPEKS------DLNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp ECSSC-CCHHHHHHHHH-HTTCCCSEE------CSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccC-CCHHHHHHHHH-HCCcEEEEC------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 00001 12345666665 559988653 24678999954 799999999999999987764
No 218
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.54 E-value=2.2e-13 Score=121.66 Aligned_cols=198 Identities=15% Similarity=0.143 Sum_probs=123.9
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC-ccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGT-VFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|+ |+||+|...+ +++|.++|+++|+++|+|++|+.. .+.+.... ..+ ++++.
T Consensus 122 ~~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~---------------~~~-di~~~ 179 (367)
T 3nyt_A 122 PRTKAII---PVSLYGQCAD---FDAINAIASKYGIPVIEDAAQSFGASYKGKRSC---------------NLS-TVACT 179 (367)
T ss_dssp TTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEEECTTTTTCEETTEETT---------------SSS-SEEEE
T ss_pred cCCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEEEECccccCCeECCeecc---------------CCC-CEEEE
Confidence 4677766 7889998877 999999999999999999999842 22221111 111 47788
Q ss_pred cC--ccccCCCCceEEEEEecCHHHHHHHHhcccc--------------CCCChHHHHHHHHHhCCchHHHHHHHHHHHH
Q 044773 89 SL--SKDLGLPGFRVGAIYSNDDTVVAAATKMSSF--------------GLVSSQTQYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 89 s~--sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~--------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
|| +|.+|.+|. .|+++++++.+.+.+...... ...+++...+....++. +++..++
T Consensus 180 Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~-------~~~~~~~ 251 (367)
T 3nyt_A 180 SFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEI-------FEEEIAL 251 (367)
T ss_dssp ECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHH
T ss_pred ECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHH-------HHHHHHH
Confidence 87 899985476 899999877776665543221 22444444444444432 2334445
Q ss_pred HHHHHHHHHHHHHhcCCceecC-Cce---E-EEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCC--------
Q 044773 153 LKQRHRKLVSGLEKAGISCLKS-NAG---L-FCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHC-------- 219 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g~~~~~~-~~g---~-~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------- 219 (289)
.+++.+++.+.|.+.++.+... .++ + ...+.++ +..++...|. ++||.+.++.....
T Consensus 252 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~-~~GI~~~~~~~~~~~~~~~~~~ 321 (367)
T 3nyt_A 252 RQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---------NRESVQASLK-AAGVPTAVHYPIPLNKQPAVAD 321 (367)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---------SHHHHHHHHH-HHTCCCBCSCSSCGGGSGGGCC
T ss_pred HHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---------CHHHHHHHHH-HCCCceeccCCCccccChhhhc
Confidence 5666677888888776544322 221 1 1223333 1234666665 66999887643110
Q ss_pred C-C---------CCeEEEEEec-CCHHHHHHHHHHHHHH
Q 044773 220 T-E---------PGWFRVCFAN-MSEDTLKLSMQRLKAF 247 (289)
Q Consensus 220 ~-~---------~~~~Ris~~~-~~~e~l~~~l~~l~~~ 247 (289)
. . ...+|+++.. ++++|++.+++.+++.
T Consensus 322 ~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 322 EKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp TTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred cCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 0 0 2468999954 7999999999988764
No 219
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.53 E-value=2.6e-13 Score=124.68 Aligned_cols=220 Identities=16% Similarity=0.122 Sum_probs=132.7
Q ss_pred CccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 11 KVKGVLVTNP-SNPLGTT-MSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 11 ~~~~i~l~~p-~NPtG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
++-+ ++..| +.-.|.+ .+++.+++|.++|++||+++|+||++.+++.+|..+.. +. ++...-+.
T Consensus 226 ~iAA-vivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~--e~-----------~gv~PDiv 291 (456)
T 4atq_A 226 QVAA-IIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAV--DH-----------EGVVPDII 291 (456)
T ss_dssp GEEE-EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGG--GG-----------TTCCCSEE
T ss_pred ceEE-EEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccc--cc-----------cCCCCchh
Confidence 3445 55556 5545654 56789999999999999999999999998777764321 11 12223366
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhc--cccCCCChHHHHHHHHHhCCchH--HHHHHHHHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKM--SSFGLVSSQTQYLLSALLSDKKF--AQNYISENKKRLKQRHRKLVSGL 164 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~l~~~l 164 (289)
+++|.+| .|+++|.+++++ .+.+.+... .+.+..|++...++.+.|+...- +.+..++.-+++.+..+.+.+.+
T Consensus 292 t~gK~lg-gg~P~~av~~~~-~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~ 369 (456)
T 4atq_A 292 TMAKGIA-GGLPLSAITGRA-DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAEL 369 (456)
T ss_dssp EECGGGG-TTSSCEEEEEEH-HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhccc-CcCCceeeEecH-HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7899998 899999999954 444433222 22344788888887777663221 12223333333333322222222
Q ss_pred HhcCCceec--CCceEEEEEecCccccC-CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHH
Q 044773 165 EKAGISCLK--SNAGLFCWVDMRHLLSS-NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLS 240 (289)
Q Consensus 165 ~~~g~~~~~--~~~g~~~~i~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~ 240 (289)
...+..+.. ..-|+++.+++..+... ....-..++...++ ++|+.+.++... ...+||.+.. .++++++++
T Consensus 370 ~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~-~~Gvl~~~~g~~----~~~irl~PpL~it~~~id~~ 444 (456)
T 4atq_A 370 SAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACL-KEGVIILTCGTY----GNVIRLLPPLVISDELLIDG 444 (456)
T ss_dssp C-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECEEECTT----SCEEEECCCTTCCHHHHHHH
T ss_pred ccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHH-HCCCEEEecCCC----CCEEEEECCCCCCHHHHHHH
Confidence 111111111 11245666776543221 12222345666666 669998875433 3479999864 699999999
Q ss_pred HHHHHHHHHHH
Q 044773 241 MQRLKAFVDSI 251 (289)
Q Consensus 241 l~~l~~~l~~~ 251 (289)
+++|.++++..
T Consensus 445 l~~l~~al~a~ 455 (456)
T 4atq_A 445 LEVLAAAIKAH 455 (456)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999998753
No 220
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.52 E-value=4.4e-14 Score=128.84 Aligned_cols=173 Identities=12% Similarity=0.059 Sum_probs=110.8
Q ss_pred hHHHhhhCCCccEEEEeC----CCCCCccCCCHHHHHHHHHHHHH--cCCEEEEecCCCCCccCCCCccChhhhhhcccc
Q 044773 2 YQLAQKRHLKVKGVLVTN----PSNPLGTTMSRNELNLLVNFITE--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 75 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~----p~NPtG~~~~~~~l~~l~~~~~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 75 (289)
+++++++++++|+|++++ |+||||.+ .++++|+++|++ +|+++++|++|..+.+...+ .
T Consensus 167 l~~~l~~~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p----~-------- 231 (427)
T 3i16_A 167 IEKVLKEDESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP----T-------- 231 (427)
T ss_dssp HHHHHHTCTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG----G--------
T ss_pred HHHHhhCCCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCCc----c--------
Confidence 455555435799999999 99999866 569999999999 99999999999865332211 1
Q ss_pred ccCCCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc-c--ccCC-CCh-HHHHHHHHHhCCchHHHHHHHHH
Q 044773 76 ENTEVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM-S--SFGL-VSS-QTQYLLSALLSDKKFAQNYISEN 149 (289)
Q Consensus 76 ~~~d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~-~--~~~~-~~~-~~q~~~~~~l~~~~~~~~~~~~~ 149 (289)
..+.+++++|+||.+|.+| .+.||++++ +.+.+.+... . ..+. .++ .. ++..++.. ...+..+
T Consensus 232 ----~~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~--~a~~~l~g----l~~~~~r 300 (427)
T 3i16_A 232 ----DVGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGGECGSTFG--VVRSMYQG----LFLAPHI 300 (427)
T ss_dssp ----GGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTT--CHHHHHHH----HHHHHHH
T ss_pred ----ccCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCccCCccHH--HHHHHHHH----HHHHHHH
Confidence 1144589999999998555 566999995 4555544431 1 1111 111 21 11122221 2224566
Q ss_pred HHHHHHHHHHHHHHHHhcCCceecCCce----EEEEEecCccccCCChhhHHHHHHHHHHh
Q 044773 150 KKRLKQRHRKLVSGLEKAGISCLKSNAG----LFCWVDMRHLLSSNTFEAEMELWKKIVYD 206 (289)
Q Consensus 150 ~~~~~~~~~~l~~~l~~~g~~~~~~~~g----~~~~i~~~~~~~~~~~~~~~~~~~~ll~~ 206 (289)
.+...+++.++.+.|+++|+++.+..+. ..+.+.+... ....++++.|...
T Consensus 301 ~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~~i~~i~l~~~------~~~~~f~~~l~~~ 355 (427)
T 3i16_A 301 SMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFNDK------DKLIEFCKGIQTG 355 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECSSH------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCCeecCCCCCCCccEEEEEEECCH------HHHHHHHHHHhhc
Confidence 7788888899999999999888654332 1444666532 2334577766533
No 221
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.51 E-value=4.3e-13 Score=122.67 Aligned_cols=204 Identities=13% Similarity=0.084 Sum_probs=122.3
Q ss_pred CCccEEEEeC-CCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 10 LKVKGVLVTN-PSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 10 ~~~~~i~l~~-p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
+++++|++++ |+|| .+ +++|.++|+++|+++|+|++|+..... ....+ . . ...+++.
T Consensus 157 ~~~~~v~~~~~~g~~----~~---~~~i~~l~~~~~~~li~D~a~~~g~~~-----~~~~~-~--------~-~~d~~~~ 214 (437)
T 3bb8_A 157 DKTKAIMIAHTLGNL----FD---LAEVRRVADKYNLWLIEDCCDALGSTY-----DGKMA-G--------T-FGDIGTV 214 (437)
T ss_dssp TTEEEEEEECGGGCC----CC---HHHHHHHHHHHTCEEEEECTTCTTCEE-----TTEET-T--------S-SSSEEEE
T ss_pred CCCeEEEEeCCCCCh----hc---HHHHHHHHHHcCCEEEEECccccCceE-----CCeec-c--------c-ccCEEEE
Confidence 4689998874 5555 44 999999999999999999999842111 11111 0 0 0126678
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHHHhccccC-----------------------------------------CCChH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFG-----------------------------------------LVSSQ 127 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~ 127 (289)
||+|..+++|.+.|+++++++.+...+.....++ ..+.+
T Consensus 215 s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 294 (437)
T 3bb8_A 215 SFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDM 294 (437)
T ss_dssp ECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHH
T ss_pred ECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHH
Confidence 8888888888899999997776655433211000 01223
Q ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC---c--e---EEEEEecCccccCCChhhHHH
Q 044773 128 TQYLLSALLSDKKFAQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN---A--G---LFCWVDMRHLLSSNTFEAEME 198 (289)
Q Consensus 128 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~---~--g---~~~~i~~~~~~~~~~~~~~~~ 198 (289)
...+....++. +.+..+..+++.+++.+.|.+. |+...+.. . + +.+.++.+... +..+
T Consensus 295 ~aa~~l~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 361 (437)
T 3bb8_A 295 QAACGLAQLER-------IEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGV------SRID 361 (437)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSS------CHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcC------cHHH
Confidence 33322222221 1233333466677888888887 65544321 0 2 22324432111 1245
Q ss_pred HHHHHHHhcCeEEeCCCCCCC--CC--------------------CCeEEEEEec-CCHHHHHHHHHHHHHHHH
Q 044773 199 LWKKIVYDVKLNISPGSSCHC--TE--------------------PGWFRVCFAN-MSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 199 ~~~~ll~~~gi~v~pg~~f~~--~~--------------------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 249 (289)
+...|. ++||.+.++..... .+ .+.+||++.. ++++|++.+++.|+++++
T Consensus 362 l~~~L~-~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 362 LVKFLD-EAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHHH-HTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHH-HCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 677665 66999988764210 00 1249999954 799999999999988753
No 222
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.51 E-value=9.9e-14 Score=134.97 Aligned_cols=225 Identities=9% Similarity=-0.033 Sum_probs=126.6
Q ss_pred hHHHhhhCCCcc--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCc-cCCC--CccChhhhh
Q 044773 2 YQLAQKRHLKVK--------GVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTV-FSSP--GFVSIMEIL 70 (289)
Q Consensus 2 l~~~~~~~~~~~--------~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~-~~~~--~~~~~~~~~ 70 (289)
++++++.+++++ +++++|| ||+|.+.+ +++|+++|+++++++++|++|.... +... +...+ ..
T Consensus 295 le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~--~g 368 (755)
T 2vyc_A 295 LQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAM--RG 368 (755)
T ss_dssp HHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSS--CS
T ss_pred HHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchh--cC
Confidence 456665544444 8999999 79999988 9999999999999999999997542 2211 11111 11
Q ss_pred hccccccCC-CCCceEEEecCccccCCCCce-EEEEEecCH--HH-HHHHH-hc--cccCCCChHHHHHHHHHhC---Cc
Q 044773 71 KDRNCENTE-VWNRVHIVYSLSKDLGLPGFR-VGAIYSNDD--TV-VAAAT-KM--SSFGLVSSQTQYLLSALLS---DK 139 (289)
Q Consensus 71 ~~~~~~~~d-~~~~~i~i~s~sK~~g~~G~r-~G~i~~~~~--~~-~~~~~-~~--~~~~~~~~~~q~~~~~~l~---~~ 139 (289)
. ..| ..++++++.|+||+++ |++ .|+++++++ .+ ...+. .. .....++.+...++..+++ ..
T Consensus 369 ~-----~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~ 441 (755)
T 2vyc_A 369 E-----PGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGN 441 (755)
T ss_dssp C-----CCCCSSBEEEEEEETTTSSS--CCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTH
T ss_pred C-----cCCccCCCeEEEECcccccc--CcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhh
Confidence 0 002 2457789999999975 333 577777554 11 11111 11 1122244444444333333 21
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc-C---------CceecCC----------------------------------
Q 044773 140 KFAQNYISENKKRLKQRHRKLVSGLEKA-G---------ISCLKSN---------------------------------- 175 (289)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g---------~~~~~~~---------------------------------- 175 (289)
. .++..+.+.++.+++++.|.++ | +++..+.
T Consensus 442 g-----g~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (755)
T 2vyc_A 442 S-----GLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGE 516 (755)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTC
T ss_pred h-----HHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccc
Confidence 1 2233344444445555555443 3 3333221
Q ss_pred ---------ce------EEEEEecCccccC-----CChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCH
Q 044773 176 ---------AG------LFCWVDMRHLLSS-----NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSE 234 (289)
Q Consensus 176 ---------~g------~~~~i~~~~~~~~-----~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~ 234 (289)
.| ..+.+.++..... .. .+...+...| +++||.+... +.+.+|+.++. +++
T Consensus 517 ~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g-~~~~~l~~~L-~~~gI~~e~~------~~~~v~~~~~~g~t~ 588 (755)
T 2vyc_A 517 SWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETG-VPAALVTAWL-GRHGIVPTRT------TDFQIMFLFSMGVTR 588 (755)
T ss_dssp TTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSC-CCHHHHHHHH-HTTTCCCSEE------CSSEEEEECCTTCCT
T ss_pred ccccccccCCCccccCCeEEEEEcCCCCCCCCccccC-CcHHHHHHHH-HHCCCEEeec------CCCeEEEEECCCCCH
Confidence 11 1233444421000 01 1123455555 5689887542 35689999954 699
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 044773 235 DTLKLSMQRLKAFVDSIT 252 (289)
Q Consensus 235 e~l~~~l~~l~~~l~~~~ 252 (289)
++++.++++|.++.+.+.
T Consensus 589 ~~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 589 GKWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp TTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999999999977653
No 223
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.50 E-value=1.6e-14 Score=141.58 Aligned_cols=216 Identities=13% Similarity=0.100 Sum_probs=131.1
Q ss_pred CccEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 11 KVKGVLVTNP-SNPLGTTM-SRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 11 ~~~~i~l~~p-~NPtG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
++.+|++... ++..|..+ +.+.+++|.++|++||+++|+||++.+++.+|..+ . .+..+ . ...+.
T Consensus 594 ~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a-~e~~g--------v---~PDii 660 (831)
T 4a0g_A 594 HVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-T-TELLG--------C---KPDIA 660 (831)
T ss_dssp EEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-T-HHHHS--------S---CCSEE
T ss_pred cEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-h-hHhcC--------C---CCcEE
Confidence 4555444432 67777765 88899999999999999999999999987777654 2 22221 1 11145
Q ss_pred cCccccCCCC-ceEEEEEecCHHHHHHHHhc--------cccCCCChHHHHHHHHHhCC---chHHHHHHHHHHHHHHHH
Q 044773 89 SLSKDLGLPG-FRVGAIYSNDDTVVAAATKM--------SSFGLVSSQTQYLLSALLSD---KKFAQNYISENKKRLKQR 156 (289)
Q Consensus 89 s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~--------~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~ 156 (289)
++||.++ +| +++|+++++ +.+.+.+... ...+..|++.+.++.+.|+. ..+ .+.+.+..+.+++.
T Consensus 661 tlsK~L~-gG~~Plgav~~~-~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l-~~~~~~~~~~l~~~ 737 (831)
T 4a0g_A 661 CFAKLLT-GGMVPLAVTLAT-DAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPET-NHNITSQGKTLREL 737 (831)
T ss_dssp EECGGGG-TTSSCCEEEEEC-HHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTT-CTTBCTTSSBBCCC
T ss_pred EEecccc-cCccCcEEEEEC-HHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHH
Confidence 8999998 67 899999995 5555544321 12233678887776666652 221 11111111222110
Q ss_pred -HHHHHHHHHhcC-CceecCCceEEEEEecCccccCC--ChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-c
Q 044773 157 -HRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLSSN--TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-N 231 (289)
Q Consensus 157 -~~~l~~~l~~~g-~~~~~~~~g~~~~i~~~~~~~~~--~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~ 231 (289)
.+.+.+.+.++. +....+. |.++.+++....... ......++...++ +.||.+.|+ ...+||++. .
T Consensus 738 l~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gv~v~p~-------g~~lrl~pp~~ 808 (831)
T 4a0g_A 738 WDEELVQQISSHSAVQRVVVI-GTLFALELKADASNSGYASLYAKSLLIMLR-EDGIFTRPL-------GNVIYLMCGPC 808 (831)
T ss_dssp SCHHHHHHHHHSTTEEEEEEE-TTEEEEEEC---------CHHHHHHHHHHH-HTTEECCCB-------TTEEEEECCTT
T ss_pred HHHHHHHHHhhCCCceeEeec-ccEEEEEEecCccccccchHHHHHHHHHHH-HCCcEEEec-------CCEEEEECCCC
Confidence 123445555553 2223333 455556664321110 0122345677766 679999875 258999974 3
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 044773 232 MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 232 ~~~e~l~~~l~~l~~~l~~~ 251 (289)
++++++++++++|.+++++.
T Consensus 809 ~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 809 TSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp CCHHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 79999999999999887643
No 224
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.50 E-value=6.4e-13 Score=122.55 Aligned_cols=213 Identities=12% Similarity=0.135 Sum_probs=132.4
Q ss_pred ccEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 12 VKGVLVTNP-SNPLGTT-MSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 12 ~~~i~l~~p-~NPtG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
.-+.++..| +.-.|.+ .+++.+++|.++|++||+++|.||++.+++.+|..+.. +. .+....+.+
T Consensus 236 ~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~--e~-----------~gv~PDi~t 302 (473)
T 4e3q_A 236 TIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGC--VT-----------YDFTPDAII 302 (473)
T ss_dssp GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHH--HH-----------TTCCCSEEE
T ss_pred ceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHH--Hh-----------cCCCCChHH
Confidence 334466667 5555654 56779999999999999999999999998777665321 11 122233567
Q ss_pred CccccCCCC-ceEEEEEecCHHHHHHHHh----c-----cccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 90 LSKDLGLPG-FRVGAIYSNDDTVVAAATK----M-----SSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 90 ~sK~~g~~G-~r~G~i~~~~~~~~~~~~~----~-----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
++|.++ .| +++|.+++++ .+.+.+.. . ...+..|++...++.+.|+...- +...++.++..++
T Consensus 303 ~~K~l~-gG~~Pl~av~~~~-~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~-----~~l~~~~~~~g~~ 375 (473)
T 4e3q_A 303 SSKNLT-AGFFPMGAVILGP-ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN-----EGLAENVRRLAPR 375 (473)
T ss_dssp ECGGGG-TTSSCCEEEEECH-HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH-----SSHHHHHHHHHHH
T ss_pred hccccc-CCCCCcccccccH-HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc-----ccHHHHHHHHHHH
Confidence 899998 66 9999999954 44443321 1 12334788887777776653221 1223334444455
Q ss_pred HHHHHHhc----CCceecCCceEEEEEecCccccC-C----ChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe
Q 044773 160 LVSGLEKA----GISCLKSNAGLFCWVDMRHLLSS-N----TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 230 (289)
Q Consensus 160 l~~~l~~~----g~~~~~~~~g~~~~i~~~~~~~~-~----~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~ 230 (289)
|.+.|+++ .+.-.... |+++.+++...... . ...-...+...++ +.||.+.|.. ..+||+++
T Consensus 376 l~~~L~~l~~~~~v~~vRG~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g-------~~i~l~PP 446 (473)
T 4e3q_A 376 FEERLKHIAERPNIGEYRGI-GFMWALEAVKDKASKTPFDGNLSVSERIANTCT-DLGLICRPLG-------QSVVLCPP 446 (473)
T ss_dssp HHHHHHHHTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEEET-------TEEEECCC
T ss_pred HHHHHHHHhcCCCeeEEeec-ceEEEEEEecCccccccccccHHHHHHHHHHHH-HCCcEEEecC-------CEEEEeCC
Confidence 55555543 22111122 34555665332111 0 1111234666666 6799988742 47899885
Q ss_pred c-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 231 N-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 231 ~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
. .++++++++++++.+++++...
T Consensus 447 L~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 447 FILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4 7999999999999999988654
No 225
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.48 E-value=1.2e-13 Score=125.85 Aligned_cols=170 Identities=17% Similarity=0.056 Sum_probs=108.4
Q ss_pred hHHHhhhCCCccEEEEeC----CCCCCccCCCHHHHHHHHHHHHH--cCCEEEEecCCCCCccCCCCccChhhhhhcccc
Q 044773 2 YQLAQKRHLKVKGVLVTN----PSNPLGTTMSRNELNLLVNFITE--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 75 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~----p~NPtG~~~~~~~l~~l~~~~~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 75 (289)
+++++++++++|+|++++ |+||||.+ .++++|+++|++ +|+++++|++|..+.+...+ .
T Consensus 167 l~~~i~~~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p----~-------- 231 (427)
T 3hvy_A 167 VKEELKKDDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP----T-------- 231 (427)
T ss_dssp HHHHHHHCTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG----G--------
T ss_pred HHHHhhCCCCCEEEEEECCCCCCCCccccH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCCC----c--------
Confidence 455565445899999999 99999766 569999999999 89999999999865332211 1
Q ss_pred ccCCCCCceEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc---cccCC--CChHH-HHHHHHHhCCchHHHHHHHH
Q 044773 76 ENTEVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM---SSFGL--VSSQT-QYLLSALLSDKKFAQNYISE 148 (289)
Q Consensus 76 ~~~d~~~~~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~---~~~~~--~~~~~-q~~~~~~l~~~~~~~~~~~~ 148 (289)
..+.+++++|+||.+|.+| .+.||++++ +.+.+.+... ...+. .+++. ...+...+ .....
T Consensus 232 ----~~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-------~~~~~ 299 (427)
T 3hvy_A 232 ----DVGADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-------FMAPH 299 (427)
T ss_dssp ----GGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHH
T ss_pred ----ccCCeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-------hHHHH
Confidence 1244589999999998544 455999995 5555544432 11211 11122 12222211 22345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCce----EEEEEecCccccCCChhhHHHHHHHHH
Q 044773 149 NKKRLKQRHRKLVSGLEKAGISCLKSNAG----LFCWVDMRHLLSSNTFEAEMELWKKIV 204 (289)
Q Consensus 149 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~g----~~~~i~~~~~~~~~~~~~~~~~~~~ll 204 (289)
+.+...++.+++.+.|+++|+++.+..+. ..+.+.+... ....+++..+.
T Consensus 300 r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l~~~------~~~~~f~~~l~ 353 (427)
T 3hvy_A 300 VTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFNDE------KKLIDFIKGIQ 353 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECSSH------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeecCCCCCCCceEEEEEeCCCH------HHHHHHHHHhc
Confidence 66678888999999999999888654332 1455666532 22345666664
No 226
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.48 E-value=1.9e-13 Score=124.91 Aligned_cols=172 Identities=15% Similarity=0.110 Sum_probs=109.5
Q ss_pred HHHhhhCCCccEEEEe-CCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 3 QLAQKRHLKVKGVLVT-NPSNPLGTTMSRNELNLLVNFITE--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~~~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
++++. +++++|+++ +||||+|..++.+++++|+++|++ +|+++|+|++|..+.++..+ ..+
T Consensus 159 ~~~l~--~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~----~~~---------- 222 (431)
T 3ht4_A 159 AAAIH--SNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP----CHV---------- 222 (431)
T ss_dssp HHHCC--TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG----GGT----------
T ss_pred HhhcC--CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc----ccc----------
Confidence 44443 479999999 489999999999999999999999 99999999999976543221 111
Q ss_pred CCCceEEEecCccccCC-CCceEEEEEecCHHHHHHHHh-ccc--cCC--CChHH-HHHHHHHhCCchHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGL-PGFRVGAIYSNDDTVVAAATK-MSS--FGL--VSSQT-QYLLSALLSDKKFAQNYISENKKR 152 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~-~G~r~G~i~~~~~~~~~~~~~-~~~--~~~--~~~~~-q~~~~~~l~~~~~~~~~~~~~~~~ 152 (289)
+.+++++|+||.+|. .+...||++++ +.+.+.+.. ... .+. .+++. ...+...+ ..+..+.+.
T Consensus 223 --g~Di~~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-------~~~~~~~~~ 292 (431)
T 3ht4_A 223 --GADLMAGSLIKNPGGGIVKTGGYIVGK-EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF-------FLAPHVAGQ 292 (431)
T ss_dssp --TCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-------HHHHHHHHH
T ss_pred --CCeEEEcCccccCCCCCCCceEEEEec-HHHHHHHHHHhccCCcccccCccHHHHHHHHhHh-------hhHHHHHHH
Confidence 345899999999752 11333999996 444444433 211 111 11111 12222211 223455667
Q ss_pred HHHHHHHHHHHHHhcCCceecCCc----eEEEEEecCccccCCChhhHHHHHHHHHHh
Q 044773 153 LKQRHRKLVSGLEKAGISCLKSNA----GLFCWVDMRHLLSSNTFEAEMELWKKIVYD 206 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~ 206 (289)
..++.+++.+.|+++|+++.+..+ +....+.+.+. ....+++..+...
T Consensus 293 ~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~i~l~~~------~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 293 ALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDDK------DRMIAFCQAIQYA 344 (431)
T ss_dssp HHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCEEECCCH------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCcCEecCCCCCCCccEEEEEEeCCH------HHHHHHHHHHHhc
Confidence 788889999999998887754332 22444566532 2334577776544
No 227
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.45 E-value=2.2e-13 Score=123.65 Aligned_cols=164 Identities=15% Similarity=0.038 Sum_probs=105.5
Q ss_pred CCccEEEEeC----CCCCCccCCCHHHHHHHHHHHHH--cCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCc
Q 044773 10 LKVKGVLVTN----PSNPLGTTMSRNELNLLVNFITE--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNR 83 (289)
Q Consensus 10 ~~~~~i~l~~----p~NPtG~~~~~~~l~~l~~~~~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 83 (289)
+++++|++++ |+||||.+. ++++|+++|++ +|+++++|++|..+.+...+ . ..+.
T Consensus 158 ~~tklV~i~~s~g~p~nptg~v~---~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p----~------------~~g~ 218 (409)
T 3jzl_A 158 PKTKMIGIQRSRGYADRPSFTIE---KIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP----P------------EVGA 218 (409)
T ss_dssp TTEEEEEEECSCTTSSSCCCCHH---HHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS----G------------GGTC
T ss_pred CCCeEEEEECCCCCCCCCcCccc---cHHHHHHHHHhhCCCCEEEEeCCcccccccCCc----c------------ccCC
Confidence 4799999999 999998764 59999999999 99999999999865332111 1 1245
Q ss_pred eEEEecCccccCCCC-ceEEEEEecCHHHHHHHHhc-cc--c--CCCChHH-HHHHHHHhCCchHHHHHHHHHHHHHHHH
Q 044773 84 VHIVYSLSKDLGLPG-FRVGAIYSNDDTVVAAATKM-SS--F--GLVSSQT-QYLLSALLSDKKFAQNYISENKKRLKQR 156 (289)
Q Consensus 84 ~i~i~s~sK~~g~~G-~r~G~i~~~~~~~~~~~~~~-~~--~--~~~~~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 156 (289)
+++++|+||.+|.+| ...||++++ +.+.+.+... .. . ...+.+. ..++...+ .....+.+...++
T Consensus 219 Div~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl-------~~~~~r~~~~~~~ 290 (409)
T 3jzl_A 219 DIIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF-------FLAPHVTAQAIKG 290 (409)
T ss_dssp SEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred eEEEECccccCCccCCceEEEEEeC-HHHHHHHHHHhccccccccccccHHHHHHHHHHH-------hhHHHHHHHHHHH
Confidence 689999999998554 345999996 5555544432 11 1 1122221 22222222 2234566678888
Q ss_pred HHHHHHHHHhcCCceecCCce----EEEEEecCccccCCChhhHHHHHHHHHHh
Q 044773 157 HRKLVSGLEKAGISCLKSNAG----LFCWVDMRHLLSSNTFEAEMELWKKIVYD 206 (289)
Q Consensus 157 ~~~l~~~l~~~g~~~~~~~~g----~~~~i~~~~~~~~~~~~~~~~~~~~ll~~ 206 (289)
.+++.+.|+++|+++.+..+. ..+.+.+.+. ....+++..|...
T Consensus 291 a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~~~------~~~~~~~~~L~~~ 338 (409)
T 3jzl_A 291 ARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHNK------EKMVAFAQAIQAA 338 (409)
T ss_dssp HHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSCH------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCcccCCCCCCCccEEEEEEeCCH------HHHHHHHHHHHhc
Confidence 999999999999887554332 1444555532 2335677776543
No 228
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.39 E-value=1.3e-12 Score=125.59 Aligned_cols=225 Identities=11% Similarity=0.020 Sum_probs=122.9
Q ss_pred hHHHhhhCCCcc---EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCc-cCCCCccChhhhhhcccccc
Q 044773 2 YQLAQKRHLKVK---GVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTV-FSSPGFVSIMEILKDRNCEN 77 (289)
Q Consensus 2 l~~~~~~~~~~~---~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~-~~~~~~~~~~~~~~~~~~~~ 77 (289)
+++++++++++| ++++++| ||+|.+++ +++|.++|++++ +++||+|.... ++ +..+....+..
T Consensus 285 Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~-~~~~~~~al~~------ 351 (715)
T 3n75_A 285 IAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFS-PIYEGKCGMSG------ 351 (715)
T ss_dssp HHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGS-GGGTTSSTTSS------
T ss_pred HHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccccC-Ccccccccccc------
Confidence 567777665555 8999999 99999998 778888887653 79999998653 32 21111111100
Q ss_pred CCCCCce-EEEecCccccCCCCceEEEEEecCHHHHHHHHhccccCC---CChHHHHHHHHHhCCchHHH-HHHHHHHHH
Q 044773 78 TEVWNRV-HIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGL---VSSQTQYLLSALLSDKKFAQ-NYISENKKR 152 (289)
Q Consensus 78 ~d~~~~~-i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~---~~~~~q~~~~~~l~~~~~~~-~~~~~~~~~ 152 (289)
.+..+.+ ++++|+||+++.. ...|++.++++.....++....... ++.+...++..++. ++. ....+.+++
T Consensus 352 g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~---~~~~~~g~~~~~~ 427 (715)
T 3n75_A 352 GRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAA---MMKGNAGKRLING 427 (715)
T ss_dssp SCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHH---HHSHHHHHHHHHH
T ss_pred CcCCCEEEEEEecccccccCC-CCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHH---HHHhhccHHHHHH
Confidence 0012443 5699999998632 1248998866532333333322222 33344333333332 222 134455666
Q ss_pred HHHHHHHHHHHHHhc-----C--CceecCC------------------------ceE-----EEEEecCccccC-----C
Q 044773 153 LKQRHRKLVSGLEKA-----G--ISCLKSN------------------------AGL-----FCWVDMRHLLSS-----N 191 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~-----g--~~~~~~~------------------------~g~-----~~~i~~~~~~~~-----~ 191 (289)
+.++.+++++.|.++ | +++..++ +.+ -+.+.++..... .
T Consensus 428 l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~ 507 (715)
T 3n75_A 428 SIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDF 507 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSS
T ss_pred HHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccC
Confidence 677777777777654 1 2332221 111 133333321100 0
Q ss_pred ChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHH
Q 044773 192 TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 192 ~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 251 (289)
. .....+.+.| +++||.+.-+..+ ++-+-++- .+.++++.++++|.++.+.+
T Consensus 508 G-i~g~~~~~~L-~~~~I~~E~~d~~------~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 508 G-IPASIVAKYL-DEHGIVVEKTGPY------NLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp C-CCHHHHHHHH-HHTTCCCSEEETT------EEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred C-CcHHHHHHHH-HHCCCEEEecCCC------cEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1 1223445544 6789987654432 33333321 58899999999998876644
No 229
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.39 E-value=1.1e-11 Score=111.10 Aligned_cols=204 Identities=13% Similarity=0.137 Sum_probs=136.2
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
.+++++|.+++..|.||.+.+. +|+++++++++|.+++. +..+.++.++ + +++.
T Consensus 150 ~~~t~lV~~~h~et~tG~~~pi--------i~~~~~~~~~vD~~q~~----g~~~id~~~~------------~--~~~~ 203 (377)
T 3e77_A 150 NPDASYVYYCANETVHGVEFDF--------IPDVKGAVLVCDMSSNF----LSKPVDVSKF------------G--VIFA 203 (377)
T ss_dssp CTTCSCEEEESEETTTTEECSS--------CCCCTTCCEEEECTTTT----TSSCCCGGGC------------S--EEEE
T ss_pred CCCccEEEEeCccCchheEchh--------hhccCCCEEEEEccccc----CCCCCchhhc------------C--EEEE
Confidence 4689999999888899999984 36788999999999983 3433444333 3 4678
Q ss_pred cCccccCCCCceEEEEEecCHHH-------------HHHHHhccccCCCChHHHHHHHHHhCCchHHHHH--HHHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTV-------------VAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNY--ISENKKRL 153 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~-------------~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~--~~~~~~~~ 153 (289)
|..|.+|.+| +|+++++++.+ ....+....+++++.....++..+++.. .+. ++...++.
T Consensus 204 s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l---~~~GG~~~i~~~~ 278 (377)
T 3e77_A 204 GAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWI---KNNGGAAAMEKLS 278 (377)
T ss_dssp EGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHH---HHTTHHHHHHHHH
T ss_pred ecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHH---HHccCHHHHHHHH
Confidence 9999999778 67777754432 1111122233445556666666665532 333 67788889
Q ss_pred HHHHHHHHHHHHhc-CCceecC----CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 044773 154 KQRHRKLVSGLEKA-GISCLKS----NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVC 228 (289)
Q Consensus 154 ~~~~~~l~~~l~~~-g~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris 228 (289)
++..+++++.|++. |+.+.+. .++..+.+.++....... .+ ..+...+. ++||.+.+|... .+.+|+|
T Consensus 279 ~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~-~~-~~~l~~l~-~~Gi~~~~g~~~----~g~iRiS 351 (377)
T 3e77_A 279 SIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA-LE-KRFLDKAL-ELNMLSLKGHRS----VGGIRAS 351 (377)
T ss_dssp HHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHH-HH-HHHHHHHH-HTTEESCBCCTT----TCSEEEE
T ss_pred HHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchh-HH-HHHHHHHH-HCCcEEeCCCCc----CCEEEEE
Confidence 99999999999988 7764331 123345566664211100 01 13455544 679999887532 3569999
Q ss_pred Eec-CCHHHHHHHHHHHHHHHHH
Q 044773 229 FAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 229 ~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
+.. +++++++.+++.|++++++
T Consensus 352 ~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 352 LYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 965 7999999999999998875
No 230
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.37 E-value=1.2e-11 Score=110.99 Aligned_cols=205 Identities=16% Similarity=0.158 Sum_probs=117.7
Q ss_pred ccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCc
Q 044773 12 VKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLS 91 (289)
Q Consensus 12 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~s 91 (289)
+|+|+ |+||+|.+.+ +++|.++|+ +|++||+|++|+....... ...... ..+.+++..+.+
T Consensus 130 tk~v~---~~~~~G~~~~---~~~i~~la~-~~~~vi~D~a~a~g~~~~~--~~~g~~----------~~d~~~~S~~~~ 190 (377)
T 3ju7_A 130 VAIVV---PYATFGSWMN---LEEYEELEK-KGVPVVVDAAPGFGLMNGG--MHYGQD----------FSGMIIYSFHAT 190 (377)
T ss_dssp EEEEC---CBCGGGBCCC---CHHHHHHHH-TTCCBEEECTTCTTCEETT--EETTTT----------CSSEEEEECBTT
T ss_pred ceEEE---EECCCCCccC---HHHHHHHHh-cCCEEEEECCCccCCeECC--EeccCC----------CCcEEEEECCCC
Confidence 78766 6788999988 888899999 9999999999984321111 010000 113333344457
Q ss_pred cccCCCCceEEEEEecCHHHHHHHHhccccC--------------CCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 92 KDLGLPGFRVGAIYSNDDTVVAAATKMSSFG--------------LVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 92 K~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~--------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
|.++ +| +.|+++++++.+.+.++.....+ ..+.+........++. +....++.+++.
T Consensus 191 K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~-------l~~~~~~~~~~~ 261 (377)
T 3ju7_A 191 KPFG-IG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKK-------WDDKLKERTRIS 261 (377)
T ss_dssp SSSC-CB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHH
T ss_pred CcCC-CC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 9998 45 57899998887776665443211 1333433333333332 334444555556
Q ss_pred HHHHHHHHhcC---CceecCCc--eE--EEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCC--CCCC--------
Q 044773 158 RKLVSGLEKAG---ISCLKSNA--GL--FCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSS--CHCT-------- 220 (289)
Q Consensus 158 ~~l~~~l~~~g---~~~~~~~~--g~--~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~--f~~~-------- 220 (289)
+++.+.|.+++ ..+.+..+ .+ ++.+.+++.. +..++...|. +.||.+..+.. +...
T Consensus 262 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~ 334 (377)
T 3ju7_A 262 EWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV------RNKQVIEDLK-KQKIEARLYFSPSCHQQVLFRNYKS 334 (377)
T ss_dssp HHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS------CHHHHHHHHH-TTTBCCBCTTSSCGGGSGGGTTSCB
T ss_pred HHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh------hHHHHHHHHH-HCCCceecccCCccccchhhhcCCC
Confidence 66677777663 22322221 11 2234444321 1245666665 67999877652 1100
Q ss_pred C---------CCeEEEEEec-CCHHHHHHHHHHHHHHHHHH
Q 044773 221 E---------PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 251 (289)
Q Consensus 221 ~---------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 251 (289)
. .+.+||.+.. +++++++..++.|+++++..
T Consensus 335 ~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 335 TDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp SCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred CCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 0 2469999954 79999999999998887653
No 231
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.31 E-value=4e-11 Score=107.89 Aligned_cols=200 Identities=11% Similarity=0.056 Sum_probs=130.1
Q ss_pred CCCccEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEE
Q 044773 9 HLKVKGVLVTNPSNPLGTT-MSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIV 87 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i 87 (289)
.+++++|++++..|.||.+ .+ +++|. +|+++++|.+++- |..+.++.++ + +++
T Consensus 164 ~~~t~lV~~~h~et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~------------~--~~~ 217 (386)
T 3qm2_A 164 SDNAAYLHYCPNETIDGIAIDE---TPDFG-----PEVVVTADFSSTI----LSAPLDVSRY------------G--VIY 217 (386)
T ss_dssp CTTCSCEEECSEETTTTEECCC---CCCCC-----TTCCEEEECTTTT----TSSCCCGGGC------------S--EEE
T ss_pred CCCCcEEEEECCcCCcCEecCc---hhhhc-----CCCEEEEEccccc----CCCCCCcccc------------C--EEE
Confidence 3678999999888889996 66 55553 7999999999983 3444444433 3 466
Q ss_pred ecCccccCCCCceEEEEEecCHHHH-------------HHHHhccccCCCChHHHHHHHHHhCCchHHHHH--HHHHHHH
Q 044773 88 YSLSKDLGLPGFRVGAIYSNDDTVV-------------AAATKMSSFGLVSSQTQYLLSALLSDKKFAQNY--ISENKKR 152 (289)
Q Consensus 88 ~s~sK~~g~~G~r~G~i~~~~~~~~-------------~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~--~~~~~~~ 152 (289)
.|..|.+|.+| +|+++++++.+. ...+....++++|.....++..+++. +.+. +++..++
T Consensus 218 ~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~---~~~~gG~~~i~~~ 292 (386)
T 3qm2_A 218 AGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKW---LKAQGGVAAMHKI 292 (386)
T ss_dssp EETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHH---HHHHTHHHHHHHH
T ss_pred EecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHH---HHHhcCHHHHHHH
Confidence 89999998667 888888654311 11111222334555556666666553 2333 6778888
Q ss_pred HHHHHHHHHHHHHhcCCcee--cC--CceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 044773 153 LKQRHRKLVSGLEKAGISCL--KS--NAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVC 228 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g~~~~--~~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris 228 (289)
.++..+++++.|++.++... .+ .+...+.+.++.. . .+ ..+... ++++||.+.+|..+. +.+|+|
T Consensus 293 ~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~--~---~~-~~~~~~-L~~~gI~~~~g~~~~----~~iRiS 361 (386)
T 3qm2_A 293 NQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADN--T---LD-KVFLEE-SFAAGLHALKGHRVV----GGMRAS 361 (386)
T ss_dssp HHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSG--G---GH-HHHHHH-HHHTTEECCBCCTTT----CSEEEE
T ss_pred HHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCc--c---cc-HHHHHH-HHHCCCEEeCCCCCc----CeEEEE
Confidence 99999999999998765211 11 1223445566531 1 11 245555 457899998875442 459999
Q ss_pred Eec-CCHHHHHHHHHHHHHHHHH
Q 044773 229 FAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 229 ~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
+.. ++++|++.+++.|+++.++
T Consensus 362 ~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 362 IYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Confidence 965 7999999999999998765
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.28 E-value=1.3e-10 Score=103.57 Aligned_cols=200 Identities=14% Similarity=0.124 Sum_probs=131.1
Q ss_pred CCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEe
Q 044773 9 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVY 88 (289)
Q Consensus 9 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~ 88 (289)
.+++++|.+++..|.||.+.+. +++ +++++++|.+++. +..+.++. +.++++.
T Consensus 138 ~~~t~lv~~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~--------------~~d~~~~ 190 (361)
T 3m5u_A 138 SDNADYAYICSNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFS--------------NIALFYG 190 (361)
T ss_dssp CTTSSEEEEESEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCT--------------TEEEEEE
T ss_pred CCCCCEEEEeCCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcc--------------cCCEEEE
Confidence 3578999999888899998762 233 4999999999983 33323322 3347889
Q ss_pred cCccccCCCCceEEEEEecCHHHHHHH--------------HhccccCCCChHHHHHHHHHhCCchHHHHH--HHHHHHH
Q 044773 89 SLSKDLGLPGFRVGAIYSNDDTVVAAA--------------TKMSSFGLVSSQTQYLLSALLSDKKFAQNY--ISENKKR 152 (289)
Q Consensus 89 s~sK~~g~~G~r~G~i~~~~~~~~~~~--------------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~--~~~~~~~ 152 (289)
|.+|.+|.+| +|+++++++.+.... +....++++|.....++..+++. +.+. ++...++
T Consensus 191 s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~---l~~~gG~~~i~~~ 265 (361)
T 3m5u_A 191 GVQKNAGISG--LSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDW---LLNQGGLDKVHEK 265 (361)
T ss_dssp ETTTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHTTTCHHHHHHH
T ss_pred echhccCCCc--cEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHH---HHHccCHHHHHHH
Confidence 9999999667 788888655442221 11122344555555555555542 2333 5777888
Q ss_pred HHHHHHHHHHHHHhcC-C-ceecCC---ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 044773 153 LKQRHRKLVSGLEKAG-I-SCLKSN---AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 227 (289)
Q Consensus 153 ~~~~~~~l~~~l~~~g-~-~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ri 227 (289)
.++..+++++.|++++ + ....+. ....+.+.++.. .. .+ .++... ++++||.+.+|... .+.+|+
T Consensus 266 ~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~---~~-~~-~~~~~~-L~~~gI~~~~g~~~----~g~iRi 335 (361)
T 3m5u_A 266 NSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKN---KD-LE-PLFVKE-AEEAGMIGLKGHRI----LGGIRA 335 (361)
T ss_dssp HHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSC---TT-HH-HHHHHH-HHHTTEECCBCCTT----TCSEEE
T ss_pred HHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCc---hh-hh-HHHHHH-HHHCCCEEecCCCc----cCeEEE
Confidence 8999999999999885 5 433221 122444555531 01 11 235544 45779999877542 246999
Q ss_pred EEec-CCHHHHHHHHHHHHHHHHH
Q 044773 228 CFAN-MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 228 s~~~-~~~e~l~~~l~~l~~~l~~ 250 (289)
|+.. ++++|++.+++.|+++.++
T Consensus 336 S~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 336 SIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EccCCCCHHHHHHHHHHHHHHHHh
Confidence 9965 7999999999999998765
No 233
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.27 E-value=3.6e-10 Score=102.24 Aligned_cols=232 Identities=15% Similarity=0.091 Sum_probs=135.3
Q ss_pred hHHHhhhCC-CccEEEEeCCC-CCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCC-ccChhhhhhccccccC
Q 044773 2 YQLAQKRHL-KVKGVLVTNPS-NPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPG-FVSIMEILKDRNCENT 78 (289)
Q Consensus 2 l~~~~~~~~-~~~~i~l~~p~-NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (289)
+|+++.+++ +..++++++|+ |..|.+-+ +++|+++|++||+.+++|+||......... +.+..++
T Consensus 205 le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~--------- 272 (501)
T 3hl2_A 205 VEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV--------- 272 (501)
T ss_dssp HHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhc---------
Confidence 677777763 45555666664 43344445 999999999999999999999864211111 1111111
Q ss_pred CCCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHh-ccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Q 044773 79 EVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATK-MSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRH 157 (289)
Q Consensus 79 d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (289)
..-++++.|.+|.+-++ +.-|.+..+++.+.+.+.. +.+.. .+++...+...++.-+ .+.++++.+...++.
T Consensus 273 --GrAD~vVqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~yPGr~-S~Spsldl~~tLL~lG---r~Gy~~ll~e~~ela 345 (501)
T 3hl2_A 273 --GRIDAFVQSLDKNFMVP-VGGAIIAGFNDSFIQEISKMYPGRA-SASPSLDVLITLLSLG---SNGYKKLLKERKEMF 345 (501)
T ss_dssp --SCCCEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHHTSCSCB-CSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred --CCCcEEEecccccceee-cCceEEEeCCHHHHHHHHHhCCCCC-CCcHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 12457899999998644 2224555666655544433 32222 3444544555554433 333466666666666
Q ss_pred HHHHHHHHhc----CCceecCC-ceEEEEEecCccccCCChhhHHHHHHHHHHhcCeE----EeCCC----------CCC
Q 044773 158 RKLVSGLEKA----GISCLKSN-AGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLN----ISPGS----------SCH 218 (289)
Q Consensus 158 ~~l~~~l~~~----g~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~----v~pg~----------~f~ 218 (289)
++|.+.|+++ |-++.... ..+.+.+.+....... ..+...+...|. ..+|- |.+|. +||
T Consensus 346 ~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~-~~~~t~~gs~Lf-~r~vsG~Rvv~~~~~~~i~g~~f~~~g 423 (501)
T 3hl2_A 346 SYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHR-DKAVTQLGSMLF-TRQVSGARVVPLGSMQTVSGYTFRGFM 423 (501)
T ss_dssp HHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTT-SCHHHHHHHHHH-HTTCCSCEEECTTCCEEETTEEESSTT
T ss_pred HHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccc-cccHHHHHHHHH-hcCCCcceeecCCCceEECCeeecCcc
Confidence 6777777664 54544333 3344445555432111 112233444444 44662 44555 555
Q ss_pred C----CCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHHh
Q 044773 219 C----TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 254 (289)
Q Consensus 219 ~----~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~ 254 (289)
. .+..|+-++.+- .+.+|++.++++|.+++.++.+.
T Consensus 424 ~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 424 SHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp TTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4 234688888854 79999999999999999987653
No 234
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.26 E-value=3.8e-10 Score=101.34 Aligned_cols=202 Identities=10% Similarity=-0.007 Sum_probs=114.7
Q ss_pred CCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEec
Q 044773 10 LKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYS 89 (289)
Q Consensus 10 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s 89 (289)
+++++|+++| ++|...+ +++|.++|+++|+++|+|++|+...... ...+ +. ..+...+...
T Consensus 127 ~~~~~v~~~~---~~g~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~-----~~~~-g~-------~~~~~~~s~~ 187 (390)
T 3b8x_A 127 DSTKAILTVN---LLGNPNN---FDEINKIIGGRDIILLEDNCESMGATFN-----NKCA-GT-------FGLMGTFSSF 187 (390)
T ss_dssp TTEEEEEEEC---GGGCCCC---HHHHHHHHTTSCCEEEEECTTCTTCEET-----TEET-TS-------SSSEEEEECC
T ss_pred cCCeEEEEEC---CccChhh---HHHHHHHHHHcCCEEEEECcCcccCEEC-----Cccc-cc-------ccceEEEEcc
Confidence 4689988875 3454445 9999999999999999999998421111 1111 00 0011111223
Q ss_pred CccccCCCCceEEEEEecCHHHHHHHHhcccc-----------------------------CC----CChHHHHHHHHHh
Q 044773 90 LSKDLGLPGFRVGAIYSNDDTVVAAATKMSSF-----------------------------GL----VSSQTQYLLSALL 136 (289)
Q Consensus 90 ~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~-----------------------------~~----~~~~~q~~~~~~l 136 (289)
.+|.++ +|. .|+++++++.+.+.+...... .. .+.+...+....+
T Consensus 188 ~~k~~~-~g~-gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l 265 (390)
T 3b8x_A 188 YSNHIA-TME-GGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL 265 (390)
T ss_dssp TTSSSC-SSS-CEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH
T ss_pred CCCCCc-cCC-ceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH
Confidence 355554 332 399999775554433321100 00 2233333222222
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC--CceE-EEEEecCccccCCChhhHHHHHHHHHHhcCeEEe
Q 044773 137 SDKKFAQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS--NAGL-FCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS 212 (289)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~--~~g~-~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 212 (289)
+.+++..++.+++++++.+.|.++ |+++..+ ..++ .+++.++.... .+..++...|. +.||.+.
T Consensus 266 -------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~L~-~~gI~v~ 333 (390)
T 3b8x_A 266 -------KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSG----VIRKQLVENLN-SAGIECR 333 (390)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSC----CCHHHHHHHHH-HTTBCCB
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCc----ccHHHHHHHHH-HCCCCee
Confidence 235567777888889999999887 6666543 2333 24455542110 11245666665 6799988
Q ss_pred CC---CCCCC-C---------C----------CCeEEEEEec-CCHHHHHHHHHHH
Q 044773 213 PG---SSCHC-T---------E----------PGWFRVCFAN-MSEDTLKLSMQRL 244 (289)
Q Consensus 213 pg---~~f~~-~---------~----------~~~~Ris~~~-~~~e~l~~~l~~l 244 (289)
+. ..+.. + . .+.+||++.. ++++|++.+++.|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 334 PIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp CSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred eecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 62 21111 0 0 1359999954 8999999998876
No 235
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.12 E-value=8.5e-09 Score=92.97 Aligned_cols=219 Identities=14% Similarity=0.143 Sum_probs=141.0
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVW 81 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (289)
+++..... +||+|++--..+|- .++ .+++.++|.+-|+++++|-+|......+...++....
T Consensus 195 ~~~~A~~~-kPklIi~G~SaY~r--~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~------------ 256 (490)
T 3ou5_A 195 LALTARLF-RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH------------ 256 (490)
T ss_dssp HHHHHHHH-CCSEEEECCSSCCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT------------
T ss_pred HHHHHhhc-CCCeEEECCccCcc--ccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc------------
Confidence 45555665 89997776555542 455 8888888999999999999995332323333333222
Q ss_pred CceEEEecCccccCCCCceEEEEEecCH--------------HHHHHHHhc-cccCCCChH--HHHHHHHHhCCchHHHH
Q 044773 82 NRVHIVYSLSKDLGLPGFRVGAIYSNDD--------------TVVAAATKM-SSFGLVSSQ--TQYLLSALLSDKKFAQN 144 (289)
Q Consensus 82 ~~~i~i~s~sK~~g~~G~r~G~i~~~~~--------------~~~~~~~~~-~~~~~~~~~--~q~~~~~~l~~~~~~~~ 144 (289)
-.++.+|.+|+| .|-|-|.|+++++ .+.+.+... -+....+++ ...+.+.++.+ .+..
T Consensus 257 -ADvVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~E--a~~p 331 (490)
T 3ou5_A 257 -ADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ--ACTP 331 (490)
T ss_dssp -CSEEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH--HHSH
T ss_pred -ceEEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHH--HHhH
Confidence 237899999998 5556699998653 234444432 111223333 22333333332 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEecCccccCCChhhHHHHHHHHHHhcCeEEe----CCCCCCC
Q 044773 145 YISENKKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLSSNTFEAEMELWKKIVYDVKLNIS----PGSSCHC 219 (289)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~ 219 (289)
..++-.++...+.+.|.+.|.+.|+++.. ...+..+++++...--. -+.++.+|++.||.+. |+. -.+
T Consensus 332 ~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~t------G~~ae~~Le~agItvNkN~iP~D-~sp 404 (490)
T 3ou5_A 332 MFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLD------GARAERVLELVSITANKNTCPGD-RSA 404 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCC------HHHHHHHHHHTTEECEEECCTTC-CCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCC------HHHHHHHHHHcCcEECCCCCCCC-CCC
Confidence 56777778888999999999999998764 33345667887653211 2467778889999874 544 122
Q ss_pred CCCCeEEEEEec-----CCHHHHHHHHHHHHHHHHH
Q 044773 220 TEPGWFRVCFAN-----MSEDTLKLSMQRLKAFVDS 250 (289)
Q Consensus 220 ~~~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~~ 250 (289)
..++.|||+... ..++|+++..+-|.+++..
T Consensus 405 ~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~~ 440 (490)
T 3ou5_A 405 ITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp SSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHHh
Confidence 335679999842 4678999999988888764
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.07 E-value=1.4e-08 Score=92.32 Aligned_cols=233 Identities=15% Similarity=0.066 Sum_probs=126.1
Q ss_pred hHHHhhhCC-CccEEEEeCCC-CCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCC
Q 044773 2 YQLAQKRHL-KVKGVLVTNPS-NPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTE 79 (289)
Q Consensus 2 l~~~~~~~~-~~~~i~l~~p~-NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d 79 (289)
|++++.+++ +.+++++.+|+ +.+|.+-+ +++|+++|++||+++++|+||..+... ...+..+. + +
T Consensus 187 le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~------~~~l~~~a-~---~ 253 (450)
T 3bc8_A 187 VEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSK------CMHLIQQG-A---R 253 (450)
T ss_dssp HHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHH------HHHHHHHH-H---H
T ss_pred HHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhh------hHhHHHHH-h---c
Confidence 677787764 46677888884 45567666 999999999999999999999854211 11111100 0 0
Q ss_pred CCCceEEEecCccccCCCCceEEEEEecCHHHHHHHHhccccCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Q 044773 80 VWNRVHIVYSLSKDLGLPGFRVGAIYSNDDTVVAAATKMSSFGLVSSQTQYLLSALLSDKKFAQNYISENKKRLKQRHRK 159 (289)
Q Consensus 80 ~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
...-+.++.|.+|.++ .....|++..++....+.+.........++++......++..+ .+-+++..+...+..++
T Consensus 254 ~~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G---~~g~~~~i~~~~~~a~~ 329 (450)
T 3bc8_A 254 VGRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLG---CSGYRKLLKERKEMFVY 329 (450)
T ss_dssp HSCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 0133567899999997 4445677777665554444322111123444444444433322 22233343333444455
Q ss_pred HHHHHHh----cCCceecCCc-eEEEEEecCccccCCChhhHHHHHHHHHHhcC---eEEeC---------------CCC
Q 044773 160 LVSGLEK----AGISCLKSNA-GLFCWVDMRHLLSSNTFEAEMELWKKIVYDVK---LNISP---------------GSS 216 (289)
Q Consensus 160 l~~~l~~----~g~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~g---i~v~p---------------g~~ 216 (289)
+.+.+++ +|.++...+. +.-..+.+...... .-.|..++.-.+. ..| ..+.+ |..
T Consensus 330 l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~-~~~D~tkl~i~~~-~~g~sG~~v~~~~~~~~~~~~~l~~~gi~ 407 (450)
T 3bc8_A 330 LSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGH-HDKAVTQLGSMLF-TRQVSGARAVPLGNVQTVSGHTFRGFMSH 407 (450)
T ss_dssp HHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSS-SSCHHHHHHHHHH-HTTCCSCEEECSCCEEEETTEEEETTTTT
T ss_pred HHHHHHhhHHhcCceecCCccCCCcceeeccccccc-ccCCCceeEEEec-CCCCccceeeecccccchhHHHHHHcCCe
Confidence 5555543 3666654331 11111223221111 0123345555543 223 33331 111
Q ss_pred CCCCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Q 044773 217 CHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 253 (289)
Q Consensus 217 f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 253 (289)
.-..+..++-+.++. .++++++.++++|.++.++..+
T Consensus 408 ~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 408 ADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp SSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 112334666666643 7999999999999998876654
No 237
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=49.65 E-value=13 Score=33.34 Aligned_cols=28 Identities=11% Similarity=0.236 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 6889999999999999999999998764
No 238
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=46.85 E-value=15 Score=35.21 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
.++++++++-|++.|+.||.|-++.+.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~ 280 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHT 280 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcc
Confidence 689999999999999999999999754
No 239
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=41.60 E-value=22 Score=31.92 Aligned_cols=28 Identities=32% Similarity=0.644 Sum_probs=24.9
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 044773 22 NPLGTTMSRNELNLLVNFITEKNIHLIS 49 (289)
Q Consensus 22 NPtG~~~~~~~l~~l~~~~~~~~~~li~ 49 (289)
+|.|..++.+++++|++.|++.++-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 4567789999999999999999998885
No 240
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=40.93 E-value=19 Score=32.13 Aligned_cols=46 Identities=17% Similarity=0.233 Sum_probs=34.8
Q ss_pred CccEEEEeCC-CCCCcc----------------CCCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 11 KVKGVLVTNP-SNPLGT----------------TMSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 11 ~~~~i~l~~p-~NPtG~----------------~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
++.+|.++.+ .+|.|. .=+.++++++++-|++.|+.||.|-++.+.
T Consensus 28 Gv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~ 90 (448)
T 1g94_A 28 GYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHM 90 (448)
T ss_dssp TCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEECSEE
T ss_pred CCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeeccc
Confidence 5778777654 344431 125789999999999999999999998754
No 241
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=40.55 E-value=75 Score=27.06 Aligned_cols=46 Identities=17% Similarity=0.044 Sum_probs=34.5
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+...|=+.--.||.|-..+.+++.++++.|+++|+.|++|--|++.
T Consensus 40 G~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~ 85 (332)
T 1hjs_A 40 GVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDT 85 (332)
T ss_dssp TCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred CCCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 4444433223677888889899999999999999999999666544
No 242
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=40.09 E-value=25 Score=31.20 Aligned_cols=28 Identities=18% Similarity=0.261 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||.|-++.+.
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 95 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHT 95 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCcc
Confidence 5789999999999999999999998754
No 243
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=40.05 E-value=26 Score=30.79 Aligned_cols=29 Identities=21% Similarity=0.291 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 28 MSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 28 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
=+.++++++++-|++.|+.||.|-++.+.
T Consensus 66 Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~ 94 (405)
T 1ht6_A 66 GNAAELKSLIGALHGKGVQAIADIVINHR 94 (405)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcCcc
Confidence 35789999999999999999999998765
No 244
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=39.25 E-value=30 Score=31.62 Aligned_cols=30 Identities=10% Similarity=0.081 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCcc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTVF 58 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~ 58 (289)
+.++++++++-|++.|+.||.|-++.+..-
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 588999999999999999999999876533
No 245
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=38.96 E-value=21 Score=31.98 Aligned_cols=28 Identities=29% Similarity=0.629 Sum_probs=24.7
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 044773 22 NPLGTTMSRNELNLLVNFITEKNIHLIS 49 (289)
Q Consensus 22 NPtG~~~~~~~l~~l~~~~~~~~~~li~ 49 (289)
+|.|..++.+++++|++.|++.++-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3567789999999999999999998885
No 246
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=38.63 E-value=22 Score=35.58 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
.++++++++.|++.|+-||.|-+|.+.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt 587 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHT 587 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEecccc
Confidence 689999999999999999999999764
No 247
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=37.98 E-value=30 Score=31.12 Aligned_cols=28 Identities=21% Similarity=0.274 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||.|-++.+.
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 107 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHT 107 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 5789999999999999999999998754
No 248
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=37.89 E-value=29 Score=30.84 Aligned_cols=28 Identities=25% Similarity=0.332 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~ 112 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHR 112 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccc
Confidence 5889999999999999999999998654
No 249
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=37.69 E-value=25 Score=31.65 Aligned_cols=28 Identities=14% Similarity=0.351 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 104 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHK 104 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 5789999999999999999999998754
No 250
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=37.66 E-value=28 Score=31.64 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.+++++|++-|++.|+.||.|-++.+.
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 5789999999999999999999998754
No 251
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=37.49 E-value=25 Score=31.58 Aligned_cols=28 Identities=11% Similarity=0.310 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 106 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHK 106 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 5789999999999999999999998754
No 252
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=37.29 E-value=32 Score=30.92 Aligned_cols=30 Identities=13% Similarity=0.269 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCcc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTVF 58 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~ 58 (289)
+.++++++++-|++.|+.||.|-++.+...
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 578999999999999999999999876543
No 253
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=37.26 E-value=29 Score=31.04 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.++++++++-|++.|+.||.|-++.+..
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 57899999999999999999999987653
No 254
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=37.16 E-value=30 Score=31.08 Aligned_cols=29 Identities=17% Similarity=0.292 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.++++++++-|++.|+.||+|-++.+..
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 58899999999999999999999987553
No 255
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=37.03 E-value=33 Score=30.37 Aligned_cols=29 Identities=21% Similarity=0.218 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.+++++|++-|++.|+.||.|-++.+..
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 47899999999999999999999997654
No 256
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=36.85 E-value=91 Score=23.15 Aligned_cols=53 Identities=19% Similarity=0.188 Sum_probs=32.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccCCCHH-HHHHHHH-HHHHcCC-EEEEecCCCC
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRN-ELNLLVN-FITEKNI-HLISDEIYSG 55 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~~~~~-~l~~l~~-~~~~~~~-~li~Dea~~~ 55 (289)
+.+++.++ ++..|++-.|-|..|..-... ..+.+++ ++++.++ +.++||.|+.
T Consensus 47 l~~li~~~-~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 47 LSELIKDY-TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp HHHHHTTS-EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHc-CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 45566666 788899999966666652222 2244443 3444565 4567998875
No 257
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=36.59 E-value=26 Score=31.87 Aligned_cols=28 Identities=4% Similarity=0.196 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++.|++.|+.||+|-++.+.
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~ 107 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHK 107 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 5789999999999999999999998754
No 258
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=36.51 E-value=27 Score=31.47 Aligned_cols=28 Identities=18% Similarity=0.349 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 5789999999999999999999998754
No 259
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=36.40 E-value=58 Score=27.76 Aligned_cols=36 Identities=19% Similarity=0.099 Sum_probs=30.4
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 21 SNPLGTTMSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 21 ~NPtG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
.||.|-..+.++..++++.|++.|+.+++|--|++.
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~ 85 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDT 85 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 567777788889999999999999999999776654
No 260
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=35.79 E-value=32 Score=30.33 Aligned_cols=29 Identities=21% Similarity=0.299 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.++++++++-|++.|+.||+|-++.+..
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 57899999999999999999999987653
No 261
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=35.09 E-value=28 Score=31.25 Aligned_cols=29 Identities=3% Similarity=0.153 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.++++++++-|++.|+.||+|-++.+..
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMT 101 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 57899999999999999999999987553
No 262
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=33.27 E-value=36 Score=31.56 Aligned_cols=29 Identities=21% Similarity=0.401 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.++++++++-|++.|+.||.|-++.+..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 57899999999999999999999987653
No 263
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=33.12 E-value=29 Score=31.24 Aligned_cols=28 Identities=14% Similarity=0.417 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||.|-++.+.
T Consensus 101 t~~df~~Lv~~aH~~Gi~VilD~V~NH~ 128 (488)
T 2wc7_A 101 GNEAFKELLDAAHQRNIKVVLDGVFNHS 128 (488)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCcC
Confidence 4689999999999999999999998754
No 264
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=32.84 E-value=46 Score=29.20 Aligned_cols=27 Identities=19% Similarity=0.231 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
.+++++|.++|+++|.-+++|=.-..+
T Consensus 73 ~~~~~~l~~~a~~~g~~vi~DVsp~~~ 99 (385)
T 1x7f_A 73 VAEFKEIINHAKDNNMEVILDVAPAVF 99 (385)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHH
Confidence 468999999999999999999776544
No 265
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=32.84 E-value=99 Score=27.20 Aligned_cols=44 Identities=16% Similarity=0.166 Sum_probs=31.4
Q ss_pred cEEEEeCCCCCCccC-----CCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 13 KGVLVTNPSNPLGTT-----MSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 13 ~~i~l~~p~NPtG~~-----~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
|+-+..+|.++.|.. .+.+++.++++.|+++|+.|++|--|++.
T Consensus 66 Rlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~ 114 (399)
T 1ur4_A 66 RVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDF 114 (399)
T ss_dssp EEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSS
T ss_pred EEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCc
Confidence 333445665433322 57888899999999999999999777654
No 266
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=32.77 E-value=35 Score=31.66 Aligned_cols=30 Identities=17% Similarity=0.235 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 28 MSRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 28 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
-+.++++++++-|++.|+.||.|-++.+..
T Consensus 217 Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 217 GDLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 358999999999999999999999987653
No 267
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=31.93 E-value=41 Score=27.14 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=26.6
Q ss_pred cEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 044773 13 KGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLIS 49 (289)
Q Consensus 13 ~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~ 49 (289)
.+.++|.--|+.|.+++ ++++.+++++||+.+|.
T Consensus 179 Pa~VicEi~~ddG~mar---~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 179 PITTICEMMGDDGNAMS---KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp SEEEEEEEBCTTSSBCC---HHHHHHHHHHHTCCEEE
T ss_pred ceEEEEEEeCCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 34466666788899999 78888888999887764
No 268
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=31.81 E-value=36 Score=30.23 Aligned_cols=28 Identities=18% Similarity=0.326 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-+....
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~ 109 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHT 109 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 5689999999999999999999998654
No 269
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=31.79 E-value=1.9e+02 Score=22.87 Aligned_cols=49 Identities=14% Similarity=0.390 Sum_probs=36.1
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHhh
Q 044773 202 KIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTL 255 (289)
Q Consensus 202 ~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~~~ 255 (289)
..+.+-++.+.|. .....+|+.+..+|+|.-++++..++...++..-.+
T Consensus 104 kAI~~S~LglnP~-----~dG~~Iri~iP~LTeErRkelvK~ak~~~E~aKvaI 152 (209)
T 4gfq_A 104 KAILKADLGLNPS-----NDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 152 (209)
T ss_dssp HHHHHHTSSCCCE-----ECSSCEEEECCBCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCC-----cCCCceeeeCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334557766663 234579999987899999999999998888765544
No 270
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=31.45 E-value=41 Score=30.95 Aligned_cols=28 Identities=11% Similarity=0.344 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.+++++|++.|++.|+.||.|-++.+.
T Consensus 78 t~~df~~Lv~~aH~~Gi~VilD~V~NHt 105 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGMRLMVDVVINHS 105 (557)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 5789999999999999999999998765
No 271
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=31.30 E-value=41 Score=31.05 Aligned_cols=28 Identities=21% Similarity=0.406 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 118 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVINHT 118 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 5789999999999999999999998754
No 272
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=30.90 E-value=41 Score=31.56 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 28 MSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 28 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
=+.+++++|++-|++.|+.||.|-++.+.
T Consensus 283 Gt~~df~~LV~~aH~~GI~VIlD~V~NHt 311 (645)
T 4aef_A 283 GGDRAFVDLLSELKRFDIKVILDGVFHHT 311 (645)
T ss_dssp TCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CCHHHHHHHHHHhhhcCCEEEEEeccccc
Confidence 36889999999999999999999998754
No 273
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=30.69 E-value=33 Score=29.18 Aligned_cols=24 Identities=25% Similarity=0.180 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCC
Q 044773 30 RNELNLLVNFITEKNIHLISDEIY 53 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~ 53 (289)
.+.+++++++|.++|++||+|--.
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~H~ 127 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDWHI 127 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 468899999999999999998643
No 274
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=30.62 E-value=44 Score=31.12 Aligned_cols=28 Identities=21% Similarity=0.263 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~NH~ 224 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVLSHI 224 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECCccc
Confidence 6789999999999999999999998754
No 275
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=30.60 E-value=33 Score=28.66 Aligned_cols=25 Identities=16% Similarity=0.109 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCC
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
.+.++++++.|.++|+.||+|--..
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H~~ 103 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWHIL 103 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccc
Confidence 4678999999999999999987654
No 276
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=30.08 E-value=52 Score=30.65 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.++++++++-|++.|+.||.|-++.+..
T Consensus 191 t~~d~~~lv~~~H~~Gi~VilD~V~NH~~ 219 (602)
T 2bhu_A 191 RPEDLMALVDAAHRLGLGVFLDVVYNHFG 219 (602)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 57899999999999999999999998653
No 277
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=30.03 E-value=45 Score=30.69 Aligned_cols=28 Identities=21% Similarity=0.377 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH~ 104 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLVVNHT 104 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 5789999999999999999999998754
No 278
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=29.47 E-value=40 Score=27.92 Aligned_cols=25 Identities=0% Similarity=0.108 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIY 53 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~ 53 (289)
..+.++++++.|.++|+.||+|--.
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H~ 86 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVHD 86 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4678999999999999999998543
No 279
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=28.80 E-value=37 Score=29.27 Aligned_cols=26 Identities=0% Similarity=0.105 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
..+.+++++++|.++|++||+|--..
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 46789999999999999999987654
No 280
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=28.71 E-value=45 Score=27.68 Aligned_cols=24 Identities=0% Similarity=0.131 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEI 52 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea 52 (289)
+.+.++++++.|.++|+.||+|--
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild~h 86 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred CHHHHHHHHHHHHHCCCEEEEEec
Confidence 467899999999999999999943
No 281
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=28.69 E-value=40 Score=27.82 Aligned_cols=24 Identities=21% Similarity=0.220 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHcCCEEEEecCCC
Q 044773 31 NELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 31 ~~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
+.++++++.|.++|+.||+|--..
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~h~~ 102 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDFHSH 102 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC
Confidence 578899999999999999986543
No 282
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=28.53 E-value=58 Score=30.13 Aligned_cols=30 Identities=20% Similarity=0.435 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 28 MSRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 28 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
-+.++++++++-|++.|+.||.|-++.+..
T Consensus 216 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 216 GDKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CCHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 368899999999999999999999987653
No 283
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=28.47 E-value=1.2e+02 Score=23.59 Aligned_cols=47 Identities=4% Similarity=-0.003 Sum_probs=27.2
Q ss_pred hHHHhhhCCCccEEEEeCCCC-CCc----cCCC-------HHHHHHHHHHHHHcCCEEE
Q 044773 2 YQLAQKRHLKVKGVLVTNPSN-PLG----TTMS-------RNELNLLVNFITEKNIHLI 48 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~N-PtG----~~~~-------~~~l~~l~~~~~~~~~~li 48 (289)
++.+....|++++++++.|.. +.. .... .+.-+.+.++|+++++.+|
T Consensus 120 i~~l~~~~P~~~iil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~~v~~i 178 (232)
T 3dc7_A 120 LTGLQTNWPTVPKLFISAIHIGSDFGGSFSAVTNGLGYRQSDYEAAIAQMTADYGVPHL 178 (232)
T ss_dssp HHHHHHHCTTSCEEEEECCCCCSCSBTTBCSSCCTTSCCHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHhCCCCeEEEEeCcccCCccCCcccccccccchHHHHHHHHHHHHHHHcCCcEE
Confidence 345566777888877665532 211 0001 3455667778888876654
No 284
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=28.34 E-value=49 Score=30.69 Aligned_cols=28 Identities=11% Similarity=0.202 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||.|-++.+.
T Consensus 86 t~~df~~lv~~~h~~Gi~VilD~V~NH~ 113 (589)
T 3aj7_A 86 TNEDCFALIEKTHKLGMKFITDLVINHC 113 (589)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 5789999999999999999999998764
No 285
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=27.87 E-value=38 Score=22.60 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCEEEEecCCC
Q 044773 33 LNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 33 l~~l~~~~~~~~~~li~Dea~~ 54 (289)
=++|.++++++|+.++.|-.-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 4789999999999999997643
No 286
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=27.84 E-value=45 Score=31.12 Aligned_cols=28 Identities=14% Similarity=0.338 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||+|-++.+.
T Consensus 207 t~~dfk~Lv~~aH~~GI~VilD~V~NH~ 234 (599)
T 3bc9_A 207 TKGELENAIDALHNNDIKVYFDAVLNHR 234 (599)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCC
Confidence 5789999999999999999999998654
No 287
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=27.64 E-value=77 Score=29.57 Aligned_cols=29 Identities=10% Similarity=0.217 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 28 MSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 28 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
-+.++++++++-|++.|+.||.|-++.+.
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~ 230 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILDWVPGHF 230 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 35789999999999999999999999865
No 288
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=27.64 E-value=44 Score=31.65 Aligned_cols=28 Identities=25% Similarity=0.229 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.+++++|++-|++.|+.||+|-++.+.
T Consensus 114 t~~dfk~Lv~~aH~~GI~VilD~V~NHt 141 (686)
T 1d3c_A 114 TIADFQNLIAAAHAKNIKVIIDFAPNHT 141 (686)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCcCcc
Confidence 5889999999999999999999998654
No 289
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=27.54 E-value=45 Score=31.59 Aligned_cols=28 Identities=25% Similarity=0.248 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.+++++|++-|++.|+.||+|-++.+.
T Consensus 110 t~~df~~Lv~~aH~~GIkVilD~V~NHt 137 (680)
T 1cyg_A 110 TLSDFQRLVDAAHAKGIKVIIDFAPNHT 137 (680)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 5889999999999999999999998654
No 290
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=27.49 E-value=42 Score=29.54 Aligned_cols=24 Identities=17% Similarity=0.154 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEI 52 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea 52 (289)
..+.++++++.|+++|+.||+|--
T Consensus 111 ~~~~ld~vV~~a~~~Gl~VILDlH 134 (399)
T 3n9k_A 111 QVQYLEKALGWARKNNIRVWIDLH 134 (399)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 367999999999999999999964
No 291
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=27.43 E-value=45 Score=31.59 Aligned_cols=28 Identities=29% Similarity=0.256 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.+++++|++-|++.|+.||.|-++.+.
T Consensus 115 t~~dfk~Lv~~aH~~GikVilD~V~NHt 142 (683)
T 3bmv_A 115 SFTDFQNLINTAHAHNIKVIIDFAPNHT 142 (683)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccc
Confidence 5889999999999999999999998654
No 292
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=27.35 E-value=49 Score=30.28 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||.|-++.+.
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH~ 104 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLVVNHT 104 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 5789999999999999999999998754
No 293
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=27.28 E-value=43 Score=28.82 Aligned_cols=23 Identities=13% Similarity=0.063 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHcCCEEEEecCC
Q 044773 31 NELNLLVNFITEKNIHLISDEIY 53 (289)
Q Consensus 31 ~~l~~l~~~~~~~~~~li~Dea~ 53 (289)
+.++++++.|.++|+.||+|--.
T Consensus 90 ~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 90 DLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 57899999999999999998776
No 294
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=27.28 E-value=81 Score=27.04 Aligned_cols=24 Identities=8% Similarity=0.206 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEec
Q 044773 28 MSRNELNLLVNFITEKNIHLISDE 51 (289)
Q Consensus 28 ~~~~~l~~l~~~~~~~~~~li~De 51 (289)
.+.+.+.++++.|++.|+.|++|=
T Consensus 94 ~~~~~v~~~~~~Ak~~GL~V~l~p 117 (343)
T 3civ_A 94 VSDDEIASMAELAHALGLKVCLKP 117 (343)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEE
Confidence 478999999999999999998853
No 295
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=27.20 E-value=46 Score=31.56 Aligned_cols=28 Identities=21% Similarity=0.267 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.+++++|++-|++.|+.||.|-++.+.
T Consensus 106 t~~df~~Lv~~aH~~GikVilD~V~NHt 133 (686)
T 1qho_A 106 NWTTFDTLVNDAHQNGIKVIVDFVPNHS 133 (686)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 5789999999999999999999998644
No 296
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=26.91 E-value=70 Score=29.95 Aligned_cols=29 Identities=3% Similarity=0.151 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.++++++++-|++.|+.||.|-++....
T Consensus 201 ~~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 229 (618)
T 3m07_A 201 TPDDFKAFIDAAHGYGLSVVLDIVLNHFG 229 (618)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeecCccCC
Confidence 67899999999999999999999998653
No 297
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=26.80 E-value=50 Score=30.33 Aligned_cols=28 Identities=14% Similarity=0.297 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++.|++.|+.||+|-+..+.
T Consensus 77 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 104 (555)
T 2ze0_A 77 TMDDFDELLAQAHRRGLKVILDLVINHT 104 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 5789999999999999999999998754
No 298
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=26.37 E-value=46 Score=27.36 Aligned_cols=22 Identities=14% Similarity=0.154 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHcCCEEEEecC
Q 044773 31 NELNLLVNFITEKNIHLISDEI 52 (289)
Q Consensus 31 ~~l~~l~~~~~~~~~~li~Dea 52 (289)
+.+++++++|.++|+.||.|--
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEec
Confidence 4679999999999999998864
No 299
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=26.22 E-value=51 Score=30.41 Aligned_cols=28 Identities=25% Similarity=0.568 Sum_probs=24.5
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 044773 22 NPLGTTMSRNELNLLVNFITEKNIHLIS 49 (289)
Q Consensus 22 NPtG~~~~~~~l~~l~~~~~~~~~~li~ 49 (289)
.|.|-.++.+++++|++.|++.++-||=
T Consensus 215 ~~~~g~YT~~di~eIv~YA~~rgI~VIP 242 (543)
T 3rcn_A 215 RPHGGFYTQDDLREIVAFAADRHITVIP 242 (543)
T ss_dssp CCEECCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHcCCEEee
Confidence 3457789999999999999999998875
No 300
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=26.13 E-value=46 Score=29.32 Aligned_cols=26 Identities=8% Similarity=0.132 Sum_probs=22.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
..+.++++++.|+++|+.||+|--+.
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDlH~~ 137 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDLHGA 137 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45689999999999999999997654
No 301
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=25.96 E-value=48 Score=27.26 Aligned_cols=22 Identities=9% Similarity=0.048 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHcCCEEEEecC
Q 044773 31 NELNLLVNFITEKNIHLISDEI 52 (289)
Q Consensus 31 ~~l~~l~~~~~~~~~~li~Dea 52 (289)
+.++++++.|.++|+.||+|--
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~h 98 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGWH 98 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcC
Confidence 4788999999999999999863
No 302
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=25.66 E-value=60 Score=31.89 Aligned_cols=27 Identities=30% Similarity=0.450 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
.++++++++-|++.|+-||.|-++...
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~ 395 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHT 395 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccc
Confidence 589999999999999999999999754
No 303
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=25.65 E-value=50 Score=28.67 Aligned_cols=25 Identities=24% Similarity=0.345 Sum_probs=22.4
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEE
Q 044773 25 GTTMSRNELNLLVNFITEKNIHLIS 49 (289)
Q Consensus 25 G~~~~~~~l~~l~~~~~~~~~~li~ 49 (289)
+-.++.+++++|++.|++.++-||-
T Consensus 89 ~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 89 KPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp CEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 4569999999999999999998885
No 304
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=25.60 E-value=49 Score=31.43 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.+++++|++-|++.|+.||+|-++.+.
T Consensus 310 t~~df~~Lv~~aH~~GikVilD~V~NHt 337 (696)
T 4aee_A 310 TMEDFEKLVQVLHSRKIKIVLDITMHHT 337 (696)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 5889999999999999999999998754
No 305
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=25.57 E-value=68 Score=29.52 Aligned_cols=29 Identities=21% Similarity=0.280 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
+.++++++++-|+++|+.||.|-++....
T Consensus 166 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 194 (558)
T 3vgf_A 166 GPEGFRKLVDEAHKKGLGVILDVVYNHVG 194 (558)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEeecccc
Confidence 46899999999999999999999997653
No 306
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=25.43 E-value=64 Score=30.22 Aligned_cols=29 Identities=28% Similarity=0.312 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHcC--C--EEEEecCCCCCc
Q 044773 29 SRNELNLLVNFITEKN--I--HLISDEIYSGTV 57 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~--~--~li~Dea~~~~~ 57 (289)
+.++++++++-|++.| + .||.|-++.+..
T Consensus 237 t~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~ 269 (637)
T 1ji1_A 237 DNSTLQTLINDIHSTANGPKGYLILDGVFNHTG 269 (637)
T ss_dssp CHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHhCCCCccceEEEEECcccCC
Confidence 5799999999999999 9 999999997653
No 307
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=25.38 E-value=46 Score=27.71 Aligned_cols=23 Identities=17% Similarity=0.344 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHcCCEEEEecCC
Q 044773 31 NELNLLVNFITEKNIHLISDEIY 53 (289)
Q Consensus 31 ~~l~~l~~~~~~~~~~li~Dea~ 53 (289)
+.++++++.|.++|+.||+|--.
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~h~ 102 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDWHI 102 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecC
Confidence 57899999999999999999543
No 308
>2a1v_A Conserved hypothetical protein; structural genomics, PSI, protein structure initiative; 2.15A {Deinococcus radiodurans} SCOP: d.198.3.1
Probab=25.26 E-value=1.7e+02 Score=21.53 Aligned_cols=50 Identities=16% Similarity=0.237 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-cCCHHHHHHHHHHHHHHHH
Q 044773 198 ELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NMSEDTLKLSMQRLKAFVD 249 (289)
Q Consensus 198 ~~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~~~~e~l~~~l~~l~~~l~ 249 (289)
+.+..|.+.++=.+.||..++ ..+|+-+.+. ..++++|.++++.--+...
T Consensus 66 e~~~~L~~~~~~~i~Payhmn--K~hWvsV~Ld~~v~~~el~elI~~Sy~Lv~ 116 (144)
T 2a1v_A 66 ERGEELRQAHPQSIAPGYHLN--KKHWVTVTLDGTVPAELLGELLRGSYLLVT 116 (144)
T ss_dssp HHHHHHHHHSTTTEEECTTSC--TTTEEEEECSSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEecCCccC--CCeEEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 356667777761125776654 4689999885 4789999998877655543
No 309
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=25.11 E-value=69 Score=25.61 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=25.5
Q ss_pred CccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 044773 11 KVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLIS 49 (289)
Q Consensus 11 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~ 49 (289)
.+-+ ++|.--|+.|.... ++++.+++++|++.+|.
T Consensus 167 ~Pa~-vicEi~~~dG~mar---~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAG-VLCELTNDDGTMAR---APECIEFANKHNMALVT 201 (217)
T ss_dssp CSCE-EEEEBBCTTSSBCC---HHHHHHHHHHTTCEEEE
T ss_pred CceE-EEEEEeCCCCCccC---HHHHHHHHHHcCCCEEE
Confidence 3444 45545577799888 78888889999987764
No 310
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=24.92 E-value=50 Score=28.32 Aligned_cols=24 Identities=25% Similarity=0.104 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCC
Q 044773 30 RNELNLLVNFITEKNIHLISDEIY 53 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~ 53 (289)
.+.++++++.|.++|+.||+|--.
T Consensus 120 l~~ld~~v~~a~~~Gi~Vild~H~ 143 (359)
T 4hty_A 120 LELLDQVVAWNNELGIYTILDWHS 143 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCC
Confidence 346799999999999999999543
No 311
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=24.10 E-value=54 Score=28.09 Aligned_cols=25 Identities=16% Similarity=-0.035 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHcCCEEEEecCCCC
Q 044773 31 NELNLLVNFITEKNIHLISDEIYSG 55 (289)
Q Consensus 31 ~~l~~l~~~~~~~~~~li~Dea~~~ 55 (289)
+.++++++.|.++|+.+|+|--+.+
T Consensus 84 ~~ld~vV~~a~~~Gi~vIlDlH~~~ 108 (340)
T 3qr3_A 84 SKYDQLVQGCLSLGAYCIVDIHNYA 108 (340)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTT
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4688999999999999999987654
No 312
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=24.05 E-value=64 Score=29.41 Aligned_cols=27 Identities=7% Similarity=0.394 Sum_probs=23.6
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEE
Q 044773 23 PLGTTMSRNELNLLVNFITEKNIHLIS 49 (289)
Q Consensus 23 PtG~~~~~~~l~~l~~~~~~~~~~li~ 49 (289)
|.|..++.+++++|++.|++.++-||-
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 335679999999999999999998885
No 313
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=23.61 E-value=50 Score=22.57 Aligned_cols=22 Identities=14% Similarity=0.132 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCEEEEecCCC
Q 044773 33 LNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 33 l~~l~~~~~~~~~~li~Dea~~ 54 (289)
=++|.++++++|+.++.|-.-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEECHHHH
Confidence 4789999999999999997643
No 314
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=23.43 E-value=57 Score=27.13 Aligned_cols=23 Identities=30% Similarity=0.215 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHcCCEEEEecCCC
Q 044773 32 ELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 32 ~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
.++++++.|+++|+.+|+|--+.
T Consensus 73 ~~~~~v~~~~~~gi~vild~h~~ 95 (305)
T 1h1n_A 73 DLIATVNAITQKGAYAVVDPHNY 95 (305)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHCCCEEEEecccc
Confidence 58899999999999999997654
No 315
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=23.33 E-value=76 Score=29.91 Aligned_cols=30 Identities=13% Similarity=0.196 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCCcc
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGTVF 58 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~ 58 (289)
+.++++++++-|++.|+.||.|-++.+..-
T Consensus 240 ~~~d~~~lv~~~H~~Gi~VilD~V~NH~~~ 269 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVILDIVLNHSAE 269 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSCCTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccc
Confidence 368999999999999999999999986543
No 316
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=23.09 E-value=66 Score=30.68 Aligned_cols=27 Identities=19% Similarity=0.498 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
.++++++++-|++.|+.||.|-++.+.
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt 341 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHV 341 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 589999999999999999999999765
No 317
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=22.94 E-value=43 Score=29.25 Aligned_cols=85 Identities=16% Similarity=0.117 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCccChhhhhhccccccCCCCCceEEEecCccccCCCCceEEEEEecCH
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTEVWNRVHIVYSLSKDLGLPGFRVGAIYSNDD 109 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~i~s~sK~~g~~G~r~G~i~~~~~ 109 (289)
.+++++|.++|+++|.-+++|=.-..+..-|.....+ ++=|-+|+.|+|+=+=... +
T Consensus 49 ~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl----------------------~~~~~lGi~glRLD~Gf~~-~ 105 (372)
T 2p0o_A 49 RQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDEL----------------------EPLIELGVTGLRMDYGITI-E 105 (372)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBC----------------------HHHHHHTCCEEEECSSCCH-H
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHH----------------------HHHHHcCCCEEEEcCCCCH-H
Confidence 4689999999999999999997654331112221111 1225678888888665553 3
Q ss_pred HHHHHHHhccccCCCChHHHHHHHHHhC
Q 044773 110 TVVAAATKMSSFGLVSSQTQYLLSALLS 137 (289)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 137 (289)
.....-..+.--.+.|.+...-+..++.
T Consensus 106 eia~ls~nlkIeLNASti~~~~l~~l~~ 133 (372)
T 2p0o_A 106 QMAHASHKIDIGLNASTITLEEVAELKA 133 (372)
T ss_dssp HHHHHHTTSEEEEETTTCCHHHHHHHHH
T ss_pred HHHHHhcCCEEEEECccCCHHHHHHHHH
Confidence 3333333332222244444444444443
No 318
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=22.93 E-value=62 Score=30.32 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||.|-++.+.
T Consensus 161 t~~d~~~Lv~~ah~~GI~VilD~V~NH~ 188 (628)
T 1g5a_A 161 TIGDLREVIAALHEAGISAVVDFIFNHT 188 (628)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 5789999999999999999999998654
No 319
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=22.78 E-value=59 Score=27.42 Aligned_cols=24 Identities=13% Similarity=0.189 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHcCCEEEEecCCC
Q 044773 31 NELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 31 ~~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
+.++++++.|+++|+.||+|-.+.
T Consensus 69 ~~l~~~v~~a~~~Gi~vildlh~~ 92 (343)
T 1ceo_A 69 SYIDRCLEWCKKYNLGLVLDMHHA 92 (343)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecCC
Confidence 477999999999999999997664
No 320
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=22.73 E-value=63 Score=30.38 Aligned_cols=28 Identities=29% Similarity=0.354 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
+.++++++++-|++.|+.||.|-++.+.
T Consensus 154 t~~df~~Lv~~aH~~GI~VilD~V~NH~ 181 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLCADFVLNHT 181 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 5789999999999999999999998754
No 321
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=22.51 E-value=1.7e+02 Score=19.06 Aligned_cols=40 Identities=25% Similarity=0.219 Sum_probs=28.8
Q ss_pred HHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEec
Q 044773 4 LAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLISDE 51 (289)
Q Consensus 4 ~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li~De 51 (289)
+++++. +.+++++.+= .+++..+.+..+|.++++.++.-.
T Consensus 21 kai~~g-kaklViiA~D-------~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 21 KALKRG-SVKEVVVAKD-------ADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHTTT-CEEEEEEETT-------SCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHcC-CeeEEEEeCC-------CCHHHHHHHHHHHHHcCCCEEEEC
Confidence 455554 7888877742 344568899999999998887654
No 322
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=22.40 E-value=1.4e+02 Score=25.76 Aligned_cols=27 Identities=11% Similarity=0.288 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCC
Q 044773 28 MSRNELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 28 ~~~~~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
++.++.++++++|+++|+.+.+..-|.
T Consensus 103 l~~~ea~~l~~~A~~~g~~~~v~~~yr 129 (372)
T 4gmf_A 103 LHPDDISSLQTLAQEQGCCYWINTFYP 129 (372)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSGG
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcCccc
Confidence 467899999999999999999887665
No 323
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=22.33 E-value=2.2e+02 Score=20.39 Aligned_cols=42 Identities=14% Similarity=0.268 Sum_probs=20.3
Q ss_pred hHHHhhhCCCccEEEEeCCCCCCccC-CCHHHH---HHHHHHHHHcCCE
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNEL---NLLVNFITEKNIH 46 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPtG~~-~~~~~l---~~l~~~~~~~~~~ 46 (289)
+++++..+ ...+++.+ |.|+|.. .|.+++ ++|.+.++--|+.
T Consensus 60 ~~~Al~~~--A~~vIl~H-NHPSG~~~PS~~D~~~T~~l~~a~~ll~I~ 105 (126)
T 2qlc_A 60 FKAAIRES--AHSIILVH-NHPSGDVQPSNADKQVTSILKKAGDLLQIE 105 (126)
T ss_dssp HHHHHHTT--CSEEEEEE-ECSSSCCSCCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHcC--CcEEEEEe-cCCCCCCCCCHHHHHHHHHHHHHHHHCCCe
Confidence 35566655 44444432 2344444 355555 3455555544543
No 324
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=22.33 E-value=57 Score=27.40 Aligned_cols=23 Identities=22% Similarity=0.306 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEecC
Q 044773 30 RNELNLLVNFITEKNIHLISDEI 52 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea 52 (289)
.+.++++++.|+++|+.||+|-.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 56889999999999999999864
No 325
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=21.87 E-value=1.4e+02 Score=21.35 Aligned_cols=43 Identities=12% Similarity=0.183 Sum_probs=30.0
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEEe-cCCHHHHHHHHHHHH
Q 044773 199 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NMSEDTLKLSMQRLK 245 (289)
Q Consensus 199 ~~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~-~~~~e~l~~~l~~l~ 245 (289)
.+..|.+..| +.||..++ ..+|+-+.+. ..+++++.++++.--
T Consensus 70 ~~~~Lr~~~~--i~Payhmn--K~hWisv~Ld~~v~d~~i~~lI~~Sy 113 (125)
T 2kfp_A 70 LVGSLRKKPG--IYPAYHMN--KEHWITVLLNGPLGAKEIHSLIEDSF 113 (125)
T ss_dssp THHHHHHSTT--EEECSSSC--SSSEEEEETTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCC--CCccccCC--CCCeEEEEcCCCCCHHHHHHHHHHHH
Confidence 4455666667 55877654 4689999884 478888888886543
No 326
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=21.68 E-value=68 Score=30.55 Aligned_cols=26 Identities=8% Similarity=0.123 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
+.++++++++-|++.|+.||.|-++.
T Consensus 319 t~edfk~LV~~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 319 TLDDFDHFVTEAGKLGLEIALDFALQ 344 (695)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 46899999999999999999999885
No 327
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=21.44 E-value=61 Score=27.90 Aligned_cols=25 Identities=8% Similarity=0.122 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHcCCEEEEecCCCC
Q 044773 31 NELNLLVNFITEKNIHLISDEIYSG 55 (289)
Q Consensus 31 ~~l~~l~~~~~~~~~~li~Dea~~~ 55 (289)
+.++++++.|.++|+.+|+|--+.+
T Consensus 91 ~~ld~vVd~a~~~Gi~vIldlH~~~ 115 (353)
T 3l55_A 91 MRVKAIVEYAMNAGLYAIVNVHHDT 115 (353)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCTTB
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 4679999999999999999987764
No 328
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=21.44 E-value=1.2e+02 Score=25.91 Aligned_cols=65 Identities=14% Similarity=0.076 Sum_probs=40.4
Q ss_pred hHHHhhhCCCccEEEEeCCCCCC----------c--------cCCCHHHHHHHHHHHHHcCCEEEEecCCCCCccCCCCc
Q 044773 2 YQLAQKRHLKVKGVLVTNPSNPL----------G--------TTMSRNELNLLVNFITEKNIHLISDEIYSGTVFSSPGF 63 (289)
Q Consensus 2 l~~~~~~~~~~~~i~l~~p~NPt----------G--------~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~ 63 (289)
+++++.. +++.+|+++.|+... | ...+.++.++|.+.++++++.+.+-..+. | .+..
T Consensus 75 ~~~ll~~-~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r---~-~p~~ 149 (383)
T 3oqb_A 75 LDAALAD-KNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTVQDKL---F-LPGL 149 (383)
T ss_dssp HHHHHHC-SSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGG---G-SHHH
T ss_pred HHHHhcC-CCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccc---c-CHHH
Confidence 4555554 467778887774321 1 13577889999999999998877765543 2 2333
Q ss_pred cChhhhhh
Q 044773 64 VSIMEILK 71 (289)
Q Consensus 64 ~~~~~~~~ 71 (289)
..+.+++.
T Consensus 150 ~~~~~~i~ 157 (383)
T 3oqb_A 150 KKIAFLRD 157 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44555554
No 329
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=21.41 E-value=80 Score=30.25 Aligned_cols=30 Identities=17% Similarity=0.199 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 27 TMSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 27 ~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
.-+.++++++++-|++.|+-||.|-++...
T Consensus 309 yGt~~dfk~lV~~~H~~GI~VilD~V~NH~ 338 (722)
T 3k1d_A 309 FGTPDDFRALVDALHQAGIGVIVDWVPAHF 338 (722)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEEEeecc
Confidence 346799999999999999999999998765
No 330
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=21.35 E-value=53 Score=22.65 Aligned_cols=22 Identities=9% Similarity=0.093 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCEEEEecCCC
Q 044773 33 LNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 33 l~~l~~~~~~~~~~li~Dea~~ 54 (289)
=++|.++++++|+.++.|-.-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCeecCHHHH
Confidence 4789999999999999997643
No 331
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=21.29 E-value=54 Score=22.59 Aligned_cols=22 Identities=0% Similarity=0.057 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCEEEEecCCC
Q 044773 33 LNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 33 l~~l~~~~~~~~~~li~Dea~~ 54 (289)
=++|.++++++|+.++.|..-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCeEEECHHHH
Confidence 4789999999999999998743
No 332
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=21.22 E-value=1e+02 Score=29.40 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCCcc
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGTVF 58 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~~~ 58 (289)
.++++++++-|++.|+.||.|-++.+..-
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~NH~~~ 294 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYNHTAE 294 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 58999999999999999999999986543
No 333
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=21.21 E-value=64 Score=28.93 Aligned_cols=25 Identities=8% Similarity=0.143 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIY 53 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~ 53 (289)
..+.+++++++|.++|+.||+|--.
T Consensus 70 ~l~~ld~vv~~a~~~Gl~VIlDlH~ 94 (464)
T 1wky_A 70 DIQTVRNLISLAEDNNLVAVLEVHD 94 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecC
Confidence 4678999999999999999998543
No 334
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=21.16 E-value=2.9e+02 Score=21.32 Aligned_cols=51 Identities=16% Similarity=0.322 Sum_probs=37.2
Q ss_pred HHHHHHhcCeEEeCCCCCCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHhhh
Q 044773 200 WKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTLH 256 (289)
Q Consensus 200 ~~~ll~~~gi~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~~~~ 256 (289)
.+..... ++.+.|. .....+|+.+..+|+|.-++++..++...++..-.+.
T Consensus 81 IekAI~~-dLglnP~-----~dG~~Iri~iP~lTeErRkelvK~~k~~~E~aKvaiR 131 (184)
T 1ge9_A 81 IEKAIRE-ELNLNPT-----VQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVR 131 (184)
T ss_dssp HHHHHHH-HHCSCCE-----EETTEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-CCCCCcc-----cCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445 7766664 2346899999778999999999999998887665443
No 335
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=20.75 E-value=84 Score=30.24 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 044773 28 MSRNELNLLVNFITEKNIHLISDEIYSGT 56 (289)
Q Consensus 28 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 56 (289)
-+.++++++++-|++.|+.||.|-++.+.
T Consensus 248 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~ 276 (755)
T 3aml_A 248 GTPEDLKYLVDKAHSLGLRVLMDVVHSHA 276 (755)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSCB
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 36899999999999999999999999865
No 336
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=20.75 E-value=98 Score=29.70 Aligned_cols=28 Identities=21% Similarity=0.369 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
.++++++++.|++.|+.||.|-++.+..
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 299 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYNHTA 299 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 7999999999999999999999998653
No 337
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=20.55 E-value=2e+02 Score=19.85 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=26.3
Q ss_pred HHHhhhCCCccEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 044773 3 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNFITEKNIHLI 48 (289)
Q Consensus 3 ~~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~~li 48 (289)
.+++++. +.+++++-+ | .|.+....|..+|+++++.++
T Consensus 30 ~kai~~g-ka~lViiA~--D-----~~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 30 IKFVKHG-EGKLVVLAG--N-----IPKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHTT-CCSEEEECT--T-----CBHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHcC-CceEEEEeC--C-----CCHHHHHHHHHHHHHcCCCEE
Confidence 3455554 778877663 2 256778899999999887654
No 338
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=20.44 E-value=70 Score=27.10 Aligned_cols=25 Identities=16% Similarity=0.268 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIY 53 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~ 53 (289)
..+.++++++.|.++|+.||+|-.+
T Consensus 93 ~~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 93 SLQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEecCC
Confidence 3567899999999999999999765
No 339
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=20.30 E-value=1e+02 Score=29.81 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCCcc
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGTVF 58 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~~~ 58 (289)
.++++++++-|++.|+.||.|-++.+..-
T Consensus 378 ~~efk~LV~~aH~~GIkVIlDvV~NHts~ 406 (884)
T 4aio_A 378 IIEYRQMVQALNRIGLRVVMDVVYNHLDS 406 (884)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCSC
T ss_pred HHHHHHHHHHHHhcCCceeeeeccccccC
Confidence 46799999999999999999999986543
No 340
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=20.27 E-value=67 Score=27.10 Aligned_cols=26 Identities=8% Similarity=0.052 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEecCCC
Q 044773 29 SRNELNLLVNFITEKNIHLISDEIYS 54 (289)
Q Consensus 29 ~~~~l~~l~~~~~~~~~~li~Dea~~ 54 (289)
..+.++++++.|+++|+.||+|--+.
T Consensus 75 ~~~~ld~~v~~a~~~Gi~vildlh~~ 100 (341)
T 1vjz_A 75 FFEKIDRVIFWGEKYGIHICISLHRA 100 (341)
T ss_dssp GHHHHHHHHHHHHHHTCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 34578999999999999999997553
No 341
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=20.22 E-value=71 Score=26.88 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEec
Q 044773 30 RNELNLLVNFITEKNIHLISDE 51 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~De 51 (289)
.+.+++++++|.++|+.||+|-
T Consensus 90 ~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 90 ISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEc
Confidence 4578999999999999999976
No 342
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=20.20 E-value=89 Score=30.83 Aligned_cols=28 Identities=25% Similarity=0.381 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCCc
Q 044773 30 RNELNLLVNFITEKNIHLISDEIYSGTV 57 (289)
Q Consensus 30 ~~~l~~l~~~~~~~~~~li~Dea~~~~~ 57 (289)
.++++++++-|++.|+.||.|-++.+..
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~NHt~ 558 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVYNHTF 558 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEcccccc
Confidence 5899999999999999999999998653
No 343
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=20.09 E-value=86 Score=28.60 Aligned_cols=25 Identities=12% Similarity=0.440 Sum_probs=22.9
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEE
Q 044773 25 GTTMSRNELNLLVNFITEKNIHLIS 49 (289)
Q Consensus 25 G~~~~~~~l~~l~~~~~~~~~~li~ 49 (289)
|-.++.+++++|++.|++.++-||-
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5679999999999999999999885
Done!