BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044777
MYILNLSSDNNNSKPTFTQILVASSLGLVIAAAMHYRIRRLRDQKIIPRRRVTDSGRVEK
LERFPHYVARQMGFSDRKECPQLCKLAAEYIRKSEGCEDDIYTFFSSEPAADSLFIKLVE
EFERCILSYFAFHWSHADLMISQVLNSDAEPKKKLKHIVMQATREQRFERVTKNLKVARV
FTTLVEEMKAMGLAPNDDSQCTEVMAPVALGDRSPVLLFMGGGMGAGKSTVLKDILKEPF
WAGAAGNAVVIEADAFKESDVIYRALSSRSHVDMLQTAELVHQSSTDAASSLLVTALNEG
RDVIMDGTLSWVPFVVQTITMARNVHRHRYRMGVGYKKAEDGTVIENYWDRIGEREQAQD
GKMRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVKSQLKSHKRFANAFLTYCQLVD
SARLYSTNALEGPPKLIGWKERDRTLLVDPDEIDCLKIIGKLNEDAESIYELYKSPNPAS
EAGSVWKDIVLSPSRINIQQELKYSIQQVERSR

High Scoring Gene Products

Symbol, full name Information P value
AT2G30630 protein from Arabidopsis thaliana 3.6e-220
AT1G04280 protein from Arabidopsis thaliana 3.3e-157

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044777
        (513 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2054497 - symbol:AT2G30630 species:3702 "Arabi...  1633  3.6e-220  2
TAIR|locus:2018304 - symbol:AT1G04280 species:3702 "Arabi...  1532  3.3e-157  1


>TAIR|locus:2054497 [details] [associations]
            symbol:AT2G30630 species:3702 "Arabidopsis thaliana"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0016301 "kinase activity" evidence=IEA]
            InterPro:IPR010488 Pfam:PF06414 GO:GO:0005524 EMBL:CP002685
            GO:GO:0016301 IPI:IPI00522740 RefSeq:NP_973567.1 UniGene:At.38338
            ProteinModelPortal:F4INW4 PRIDE:F4INW4 EnsemblPlants:AT2G30630.2
            GeneID:817613 KEGG:ath:AT2G30630 OMA:EENIFAF Uniprot:F4INW4
        Length = 552

 Score = 1633 (579.9 bits), Expect = 3.6e-220, Sum P(2) = 3.6e-220
 Identities = 316/370 (85%), Positives = 345/370 (93%)

Query:   143 QVLNSDAEPKKKLKHIVMQATREQRFERVTKNLKVARVFTTLVEEMKAMGLAPNDDSQCT 202
             Q+L++D EPKKKLKHIVM ATREQRFERVTKNLKVARVF TLVEEMKAMG+A  DDS+CT
Sbjct:   175 QILSADVEPKKKLKHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGIASVDDSECT 234

Query:   203 EVMAPVALGDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVI 262
             EVMAPVA  DRSPVLL MGGGMGAGKSTVLKDILKEPFWAGA  +AVVIEADAFKESDVI
Sbjct:   235 EVMAPVAHKDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGA--DAVVIEADAFKESDVI 292

Query:   263 YRALSSRSHVDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMA 322
             YRALS+R HVDM++TAE VHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMA
Sbjct:   293 YRALSARGHVDMIKTAEFVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMA 352

Query:   323 RNVHRHRYRMGVGYKKAEDGTVIENYWDRIGEREQAQ-DGKMRKPYRIELVGVVCDAYLA 381
             RNVHRHRYRMG GYK  E+G VIENYW+RIGER+Q Q DG+ RKPYRIELVGVVCDAYLA
Sbjct:   353 RNVHRHRYRMGAGYKVGENGDVIENYWERIGERQQLQEDGRERKPYRIELVGVVCDAYLA 412

Query:   382 VVRGIRRAIMCRRAVRVKSQLKSHKRFANAFLTYCQLVDSARLYSTNALEGPPKLIGWKE 441
             V+RGIRRAIMCRRAVRV+SQL+SHKRFANAFLTYC LVD+ARLY TNALEG PKLIGWKE
Sbjct:   413 VIRGIRRAIMCRRAVRVRSQLRSHKRFANAFLTYCNLVDNARLYCTNALEGSPKLIGWKE 472

Query:   442 RDRTLLVDPDEIDCLKIIGKLNEDAESIYELYKSPNPASEAGSVWKDIVLSPSRINIQQE 501
             +++TLLVDP+EIDCLK +G+LNE+A+SIYELY++PNPA EAGS+WKDIVLSPSR NIQQE
Sbjct:   473 KEKTLLVDPEEIDCLKNVGRLNENADSIYELYRNPNPACEAGSIWKDIVLSPSRFNIQQE 532

Query:   502 LKYSIQQVER 511
             LKYSIQ+VER
Sbjct:   533 LKYSIQKVER 542

 Score = 516 (186.7 bits), Expect = 3.6e-220, Sum P(2) = 3.6e-220
 Identities = 98/139 (70%), Positives = 114/139 (82%)

Query:     9 DNNNSKPTFTQILVASSLGLVIAAAMHYRIRRLRDQKIIPRRRVTDSGRV-EKLERFPHY 67
             ++NN+  TF QILV SS+GL++A A+H+R+R+LR  K IPR R +   +  EKLERF HY
Sbjct:    19 NSNNNTTTFAQILVISSIGLLLALALHFRLRKLRHSKNIPRLRSSQKHKGHEKLERFSHY 78

Query:    68 VARQMGFSDRKECPQLCKLAAEYIRKSEGCEDDIYTFFSSEPAADSLFIKLVEEFERCIL 127
             V RQMGF DR+ECP LCKLA EYIRKS  CE+DIY+FFS EP ADSLFIKLVEEFERCIL
Sbjct:    79 VVRQMGFKDRRECPHLCKLANEYIRKSGSCEEDIYSFFSEEPGADSLFIKLVEEFERCIL 138

Query:   128 SYFAFHWSHADLMISQVLN 146
             SYFA+HWSHADLMISQV N
Sbjct:   139 SYFAYHWSHADLMISQVTN 157


>TAIR|locus:2018304 [details] [associations]
            symbol:AT1G04280 species:3702 "Arabidopsis thaliana"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0016301 "kinase activity" evidence=IEA]
            [GO:0016020 "membrane" evidence=IDA] InterPro:IPR010488
            Pfam:PF06414 EMBL:CP002684 GO:GO:0005524 GO:GO:0016020
            GO:GO:0016310 GO:GO:0016301 EMBL:AK227002 IPI:IPI00549100
            RefSeq:NP_171924.2 UniGene:At.42464 ProteinModelPortal:Q0WUY1
            SMR:Q0WUY1 STRING:Q0WUY1 PRIDE:Q0WUY1 EnsemblPlants:AT1G04280.1
            GeneID:839555 KEGG:ath:AT1G04280 TAIR:At1g04280
            HOGENOM:HOG000238325 InParanoid:Q0WUY1 OMA:RAISSMG PhylomeDB:Q0WUY1
            ProtClustDB:CLSN2683120 Genevestigator:Q0WUY1 Uniprot:Q0WUY1
        Length = 534

 Score = 1532 (544.3 bits), Expect = 3.3e-157, P = 3.3e-157
 Identities = 313/512 (61%), Positives = 386/512 (75%)

Query:    20 ILVASSLGLVIAAAMHY------RIRRL--------RDQKIIPRRRVTDSGRVEKLERFP 65
             +L+AS  GL  A A  Y      R R+L        +D KI P     DSGR   LERF 
Sbjct:    22 LLLASLGGLAAAVAAAYAGELLLRRRKLDQGASMGYKDVKIAPLIERKDSGRRSNLERFS 81

Query:    66 HYVARQMGFSDRKECPQLCKLAAEYIRKSEGCEDDIYTFFSSEPAADSLFIKLVEEFERC 125
             HYVARQ+GF D  E PQLCKLA  Y+ K++G ++++  +  +E   DSL++ L+EEF+RC
Sbjct:    82 HYVARQLGFEDPNEYPQLCKLANGYLLKTKGYDENVDEYLENEAERDSLYVHLLEEFDRC 141

Query:   126 ILSYFAFHWSHADLMISQVLNSDAEPK-KKLKHIVMQATREQRFERVTKNLKVARVFTTL 184
             IL+YF+F+W+ +  +ISQ L+ +++ K  KLK  VM ATR+QRFERVTK+LKV RV +TL
Sbjct:   142 ILTYFSFNWTQSSNLISQALSDESDQKVPKLKDFVMAATRKQRFERVTKDLKVKRVISTL 201

Query:   185 VEEMKAMGLAPNDDSQCTEVMAPVALGDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGA 244
             VEEM+ +G + + +  CTEVM+PVA   RSPVLL MGGGMGAGKSTVLKDI  E FW+ A
Sbjct:   202 VEEMRVIG-SGSSEPHCTEVMSPVAHNKRSPVLLLMGGGMGAGKSTVLKDIFLESFWSEA 260

Query:   245 AGNAVVIEADAFKESDVIYRALSSRSHVD-MLQTAELVHQSSTDAASSLLVTALNEGRDV 303
               +AVVIEADAFKE+DVIYRALSSR H D MLQTAELVHQSSTDAASSLLVTALN+GRDV
Sbjct:   261 QADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTALNDGRDV 320

Query:   304 IMDGTLSWVPFVVQTITMARNVHRHRYRMGVGYKKAEDGTVIENYWDRIGEREQAQDGKM 363
             IMDGTLSW PFV Q I MARNVH+ +YRMG GYK +E+GT+ E YW+   E E  ++GK 
Sbjct:   321 IMDGTLSWEPFVEQMIEMARNVHKQKYRMGEGYKVSEEGTITEKYWEE-EEEETKENGKQ 379

Query:   364 R--KPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVKSQLKSHKRFANAFLTYCQLVDS 421
             +  KPYRIELVGVVCDAYLAV RGIRRA+M +RAVRVK QL SHKRFANAF  YC+LVD+
Sbjct:   380 QNLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKPQLNSHKRFANAFPKYCELVDN 439

Query:   422 ARLYSTNALEGPPKLIGWKERDRTLLVDPDEIDCLKIIGKLNEDAESIYELYKSPNPASE 481
             ARLY TNA+ GPP+LI WK+ +  LLVDP++IDCLK +  LN DAESIYELY  P+  S+
Sbjct:   440 ARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDIDCLKRVSSLNPDAESIYELYPDPSQLSK 499

Query:   482 AGSVWKDIVLSPSRINIQQELKYSIQQVERSR 513
              GSVW D+VL PSR  +Q+EL  +I+++E+++
Sbjct:   500 PGSVWNDVVLVPSRPKVQKELSDAIRRIEKAQ 531


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      513       513   0.00088  119 3  11 22  0.37    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  292 KB (2153 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.18u 0.21s 41.39t   Elapsed:  00:00:02
  Total cpu time:  41.18u 0.21s 41.39t   Elapsed:  00:00:02
  Start:  Fri May 10 09:32:56 2013   End:  Fri May 10 09:32:58 2013

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