BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044777
(513 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54944|ZTOX_STRPY Toxin zeta OS=Streptococcus pyogenes PE=1 SV=3
Length = 287
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 214 SPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHVD 273
SP +GG G+GK+++ I +E GN +VI+ D FK+ + L D
Sbjct: 32 SPTAFLLGGQPGSGKTSLRSAIFEE-----TQGNVIVIDNDTFKQQHPNFDELVKLYEKD 86
Query: 274 MLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITM--ARNVHRHRYR 331
+++ T+A S L ++G +++++GT +QT TM A+ Y
Sbjct: 87 VVKHVTPYSNRMTEAIISRLS---DQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYV 143
Query: 332 MGVGYKKAEDGTVIENY 348
M V + GT IE Y
Sbjct: 144 MAVPKINSYLGT-IERY 159
>sp|Q93CM1|ZTOX_ENTHR Toxin zeta OS=Enterococcus hirae PE=3 SV=1
Length = 286
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 214 SPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHVD 273
SP +GG G+GK+++ I +E GN +VI+ D FK+ + L D
Sbjct: 31 SPTAFLLGGQPGSGKTSLRSAIFEE-----TQGNVIVIDNDTFKQQHPNFDELVKLYEKD 85
Query: 274 MLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITM--ARNVHRHRYR 331
+++ T+A S L ++G +++++GT +QT TM A+ Y
Sbjct: 86 VVKHVTPYSNRMTEAIISRLS---DKGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYV 142
Query: 332 MGVGYKKAEDGTVIENY 348
M V + GT IE Y
Sbjct: 143 MAVPKINSYLGT-IERY 158
>sp|P0A4M2|ZTOX_STRAG Toxin zeta OS=Streptococcus agalactiae PE=3 SV=1
Length = 287
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 210 LGDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSR 269
L SP +GG G+GK+++ I +E GN V+I+ D FK+ + L
Sbjct: 28 LAVESPTAFLLGGQPGSGKTSLRSAISEE-----TQGNVVIIDNDTFKQQHPNFDELVKL 82
Query: 270 SHVDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITM--ARNVHR 327
D+++ T+A S L ++G +++++GT +QT TM A++
Sbjct: 83 YEKDVVKYVTPYSNRMTEAIISRL---RDKGYNLVIEGTGRTTDVPIQTATMLQAKDYET 139
Query: 328 HRYRMGVGYKKAEDGTVIENY 348
Y M V + GT IE Y
Sbjct: 140 KMYVMAVPKINSYLGT-IERY 159
>sp|P0A4M1|ZTOX_ENTFL Toxin zeta OS=Enterococcus faecalis PE=3 SV=1
Length = 287
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 210 LGDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSR 269
L SP +GG G+GK+++ I +E GN V+I+ D FK+ + L
Sbjct: 28 LAVESPTAFLLGGQPGSGKTSLRSAISEE-----TQGNVVIIDNDTFKQQHPNFDELVKL 82
Query: 270 SHVDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITM--ARNVHR 327
D+++ T+A S L ++G +++++GT +QT TM A++
Sbjct: 83 YEKDVVKYVTPYSNRMTEAIISRL---RDKGYNLVIEGTGRTTDVPIQTATMLQAKDYET 139
Query: 328 HRYRMGVGYKKAEDGTVIENY 348
Y M V + GT IE Y
Sbjct: 140 KMYVMAVPKINSYLGT-IERY 159
>sp|Q97QZ1|PEZT_STRPN Toxin PezT OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=pezT PE=1 SV=1
Length = 253
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 213 RSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHV 272
+ P+ + +GG GAGK+T+ + KE GN V+I+ D+F+ Y L
Sbjct: 30 KQPIAILLGGQSGAGKTTIHRIKQKE-----FQGNIVIIDGDSFRSQHPHYLELQQEYGK 84
Query: 273 DMLQTAELVHQSSTDAASSL---LVTALNEGR-DVIMDGTLSWVPFVVQTITMARN 324
D ++ + D A + LVT L+ R +++++GTL V +T + +N
Sbjct: 85 DSVEY-------TKDFAGKMVESLVTKLSSLRYNLLIEGTLRTVDVPKKTAQLLKN 133
>sp|Q9KDD8|URK_BACHD Uridine kinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM
18197 / FERM 7344 / JCM 9153 / C-125) GN=udk PE=3 SV=1
Length = 211
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 213 RSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHV 272
+ P+++ + GG G+GK+TV K+I F+ + V+IE DA+ Y+ S S
Sbjct: 3 KRPIIIGVAGGTGSGKTTVAKEI----FYQFNEKSIVLIEQDAY------YKDQSQLSLE 52
Query: 273 DMLQT 277
+ LQT
Sbjct: 53 ERLQT 57
>sp|P58281|OPA1_MOUSE Dynamin-like 120 kDa protein, mitochondrial OS=Mus musculus GN=Opa1
PE=1 SV=1
Length = 960
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 235 ILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHVDMLQTAELVH 282
+LK+ F AG+ G D ESD YR +S + +D LQ EL+H
Sbjct: 178 LLKDFFTAGSPGETAFRATDHGSESDKHYRKVSDKEKIDQLQ-EELLH 224
>sp|Q2TA68|OPA1_RAT Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus
GN=Opa1 PE=1 SV=1
Length = 960
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 235 ILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHVDMLQTAELVH 282
+LK+ F AG G D ESD YR +S + +D LQ EL+H
Sbjct: 178 LLKDFFTAGTPGETAFRATDHGSESDKHYRKVSDKEKIDQLQ-EELLH 224
>sp|Q182S8|KGUA_CLOD6 Guanylate kinase OS=Clostridium difficile (strain 630) GN=gmk PE=3
SV=1
Length = 205
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 213 RSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHV 272
+ +LL + G GAGK T+ K++LKE + +A + + V Y +S
Sbjct: 4 KKGLLLVVSGPSGAGKGTICKELLKENDTIKLSVSATTRKPRTGEVDGVNYFFISKEKFE 63
Query: 273 DMLQTAEL-----VHQSSTDAASSLLVTALNEGRDVIMD 306
+M++ E ++ + + ++ L +G+DV+++
Sbjct: 64 EMIEKGEFLEYAQIYDNFYGTPKAAIMECLEKGQDVLLE 102
>sp|Q8CC88|VWA8_MOUSE von Willebrand factor A domain-containing protein 8 OS=Mus musculus
GN=Vwa8 PE=2 SV=2
Length = 1905
Score = 33.1 bits (74), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 222 GGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHVDMLQTAELV 281
GG G GK+ + K+ +A G ++ E ++Y+ +++R D+LQ +
Sbjct: 446 GGKGCGKTVIAKN------FAALLGYSI--------EPIMLYQDMTAR---DLLQQRYTL 488
Query: 282 HQSSTDAASSLLVTALNEGRDVIMDG 307
T SS LV+A EG+ V++DG
Sbjct: 489 PNGDTAWRSSPLVSAAREGKLVLLDG 514
>sp|Q12VF9|KTHY_METBU Probable thymidylate kinase OS=Methanococcoides burtonii (strain
DSM 6242) GN=tmk PE=3 SV=1
Length = 201
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 217 LLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRSHVDMLQ 276
L+ + G G+GKST+ + + P +A A E D +Y+A+ +S D L
Sbjct: 5 LITLEGIDGSGKSTITRFLNSHPAFANAVFTK---EPTTSWIGDAVYKAI--QSDTDELA 59
Query: 277 TAELVHQSSTDAASSLLVTALNEGRDVIMD 306
L D S+L+ A+ EG+ VI D
Sbjct: 60 ELMLFTADHADHISTLIRPAIEEGKIVISD 89
>sp|Q857H2|VG50_BPMB2 Putative adenosylcobalamin-dependent ribonucleoside-triphosphate
reductase OS=Mycobacterium phage Bxz2 GN=50 PE=3 SV=1
Length = 672
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 39 RRLRDQKIIPRRRVTDSGRVEKLER--------FPHYVARQMGFSDRKECPQLCKLAAEY 90
+LR + +R V +G + K+ F Y R++ S P ++ A+Y
Sbjct: 470 HQLRIPVPVKKRTVAPTGTIAKMPGVSEGIHPIFSRYFIRRVRLSMSD--PDQTRMLADY 527
Query: 91 IRKSEGCEDDIYTFFS---SEPAADSLFIKLVEEFERCILSYFAFHWSHADLMISQVLNS 147
R+ EDD+Y F+ S P D+L +++E + + S S ADL ++++L
Sbjct: 528 GRQGYEVEDDLYAKFTGVVSIPTQDTLVAEVIEHYGQDSESLVE---SAADLSLNELLGF 584
Query: 148 DA 149
A
Sbjct: 585 QA 586
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,729,636
Number of Sequences: 539616
Number of extensions: 7398944
Number of successful extensions: 22344
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 22337
Number of HSP's gapped (non-prelim): 19
length of query: 513
length of database: 191,569,459
effective HSP length: 122
effective length of query: 391
effective length of database: 125,736,307
effective search space: 49162896037
effective search space used: 49162896037
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)