BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044780
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750
PE=1 SV=1
Length = 217
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 143/202 (70%), Gaps = 7/202 (3%)
Query: 2 AQQPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMR 61
A P GG +P + +PID+AIVRK+M + GNF + D NGN+LFKVK +
Sbjct: 18 APTPQAGGVVVDPK--YCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLH 75
Query: 62 RRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVF 121
+RVLLDG+G P+ T+REK +S H RWQVFRG S+D RDL+++ K SS+ K TKL+VF
Sbjct: 76 DKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLK-TKLDVF 134
Query: 122 LANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVT 181
L +N E CDFRV SWL SC +YAG+S AIVAQM K TV+S+FLGK+NF VT
Sbjct: 135 LGHNKDEKRCDFRV--KGSWL--ERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVT 190
Query: 182 VHPNVDYAFIVALIVILDEINR 203
V+PNVDYAFI +L+VILD++NR
Sbjct: 191 VYPNVDYAFIASLVVILDDVNR 212
>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740
PE=2 SV=2
Length = 194
Score = 199 bits (507), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 129/185 (69%), Gaps = 4/185 (2%)
Query: 22 HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
+PI+L IVRKVM + GNF V D NGN+LFKVK + +R+LLD PI T+RE
Sbjct: 12 YPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAYDTPILTLRENK 71
Query: 82 MSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSW 141
+S H RW V+RG+S+D DL+++ K SS+ KL++FLA+N +CDF V SW
Sbjct: 72 VSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHV--KGSW 129
Query: 142 LFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
+ SC +YAGKS AIVAQM +K T +SI +GK+NF VTV+PNVD+AFIV+LIVILD+I
Sbjct: 130 I--DRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDI 187
Query: 202 NRAGS 206
NR S
Sbjct: 188 NREDS 192
>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840
PE=2 SV=2
Length = 224
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 131/184 (71%), Gaps = 5/184 (2%)
Query: 19 SSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIR 78
S HP+DLAIVRKV+ + GNF + + GN+LFKVK+ F + +R+L+DG G + T++
Sbjct: 33 CSLHPVDLAIVRKVLKITDGNFVITNAEGNLLFKVKDPFFSLHEKRILMDGFGTKVLTLK 92
Query: 79 EKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEG 138
K M+ H RW VFRG S++ DL+++ K S++ TTKL+VFLA+N + CD+R +EG
Sbjct: 93 GKIMTMHDRWLVFRGGSTEEVDLLYTVKRSNMVQI-TTKLDVFLADNIEQKKCDYR-LEG 150
Query: 139 SSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVIL 198
WL +SC +YAG S I+AQM EK+T++S+ GK+NF +TV+PNVDYAFI +LIVIL
Sbjct: 151 -VWL--ETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAFIASLIVIL 207
Query: 199 DEIN 202
EI
Sbjct: 208 VEIQ 211
>sp|Q9ZQR8|LURP1_ARATH Protein LURP1 OS=Arabidopsis thaliana GN=LURP1 PE=2 SV=1
Length = 207
Score = 176 bits (447), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 125/197 (63%), Gaps = 9/197 (4%)
Query: 13 NPVAVISSHH----PIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLD 68
P ++ S + P+ LAIVRKVM + GNF + +G +LFKVK+ + +R+LLD
Sbjct: 3 QPCVIVGSKYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLD 62
Query: 69 GAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTRE 128
+G + T+R K M+ H RWQVFRG S++ L+++ K SS+ KL VFLANN E
Sbjct: 63 CSGAKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQL-APKLEVFLANNVEE 121
Query: 129 DVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDY 188
+CDF+V +WL SC +YAG S I+A M KQT++ F GK++F VTV NVDY
Sbjct: 122 KICDFKV--KGAWL--DDSCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDY 177
Query: 189 AFIVALIVILDEINRAG 205
AFI +LIVIL EI +AG
Sbjct: 178 AFIASLIVILVEIEKAG 194
>sp|Q9LSQ1|LOR13_ARATH Protein LURP-one-related 13 OS=Arabidopsis thaliana GN=At3g16900
PE=3 SV=1
Length = 185
Score = 124 bits (310), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 106/187 (56%), Gaps = 27/187 (14%)
Query: 22 HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
P+DL I +G+ VKD GN +FKVK + +R+L+D +PI T++ K
Sbjct: 24 QPLDLTI--------TGD-TVKDATGNKVFKVKTPLFGLHNKRILVDPNDSPIVTMKMKV 74
Query: 82 MSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANN-TREDVCDFRVVEGSS 140
S+H RWQV+RG SD D IF+ K SS K T++ VFL +N TRE CDF ++G
Sbjct: 75 TSKHDRWQVYRG--SDLDDKIFTVKRSSTVQLK-TRVEVFLKHNQTRESSCDF-TIKGR- 129
Query: 141 WLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDE 200
F +CTIY S+ I+AQ+ E G + T++PNVDYAFIV LI I D
Sbjct: 130 --FMKRACTIYVADSTKIIAQVYE---------GHERLVATIYPNVDYAFIVTLIFIFDL 178
Query: 201 INRAGSG 207
IN G+G
Sbjct: 179 IN-MGTG 184
>sp|Q9LYM3|LOR14_ARATH Protein LURP-one-related 14 OS=Arabidopsis thaliana GN=At3g56180
PE=2 SV=2
Length = 204
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 16/193 (8%)
Query: 15 VAVISSH----HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGA 70
++V+S +P+DL + RKV FS ++V D +GN+L ++ R+RV+ D A
Sbjct: 16 ISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPA 75
Query: 71 GNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNT---R 127
G I ++R+K ++ +W+V GES + DL+F+ + S S KT+ ++VFL N +
Sbjct: 76 GFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTS-VDVFLPENNNVKK 134
Query: 128 EDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVD 187
+ CDF G S+ + K+ A++A + T S GK NF V V+P VD
Sbjct: 135 TNTCDFHASGGY------SNISFKVFKADALIAGV--GFTWGSFCKGKYNFKVRVNPEVD 186
Query: 188 YAFIVALIVILDE 200
YAFI+AL+V++D+
Sbjct: 187 YAFIIALLVMVDD 199
>sp|B3H5L1|LOR9_ARATH Protein LURP-one-related 9 OS=Arabidopsis thaliana GN=At3g10986
PE=3 SV=1
Length = 197
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 17/188 (9%)
Query: 22 HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
+ +L + R+ +DV D + N++F V +RR+RVL D AG P+ ++R K
Sbjct: 13 YTTELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWNIRRKRVLRDAAGIPLLSMRTKG 72
Query: 82 MSRHR-RWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVC----DF--- 133
+ R W+V++G+S++ +L+FSA+ +L SFKT+ + + D+ DF
Sbjct: 73 LVPMRYNWEVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSSTDISSVEPDFQTF 132
Query: 134 -RVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIV 192
R + S LFEP T+ +A+++ T + G +F V V+P VD+AF+V
Sbjct: 133 GRYIGSSFKLFEPIHNTL--------LAEVVHDFTWGGLIKGSYSFKVRVNPYVDFAFVV 184
Query: 193 ALIVILDE 200
AL+VI D+
Sbjct: 185 ALLVITDD 192
>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810
PE=2 SV=1
Length = 220
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 26 LAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRR--VLLDGAGNPIATIREKAMS 83
L + + + ++ F D G+I+F+V + R VL+D G + T++ K +
Sbjct: 33 LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRPT 92
Query: 84 RHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLF 143
H+RW+ F GE S+ + IFS + SS+ T ++ V+ + T E+ +++G F
Sbjct: 93 LHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVY--DGTGEEY----IIDGD---F 143
Query: 144 EPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEIN 202
SC IY K + + ++ LG++ F + + P D AF + L+V+LD+IN
Sbjct: 144 SQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQIN 202
>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120
PE=1 SV=1
Length = 210
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 13/178 (7%)
Query: 29 VRKVMIFSSGN-FDVKDTNGNILFKVKNVFAFMRRRR---VLLDGAGNPIATIREKAMSR 84
VRK +F +G+ F V D G+++F+V + R VL+D G + T+R K S
Sbjct: 21 VRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPSL 80
Query: 85 HRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFE 144
RRW+ + GE SD + IF + SS+ + + V+ C ++EGS F
Sbjct: 81 RRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVYGDYQ-----CSEYLIEGS---FG 132
Query: 145 PSSCTIYAGKSSAIVAQMLEK-QTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
+CT+ ++ VA++ K ++ LGK+ F + V P D AF + L+++LD+I
Sbjct: 133 ARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190
>sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640
PE=2 SV=1
Length = 196
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 4 QPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRR 63
P F ++ S + L + +K ++F+ F V + NG ++F+V N R
Sbjct: 5 HPKFPSTCEE--SLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDN 62
Query: 64 RVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLA 123
VL+D +G P+ +IR K +S W V+ GE+ RD IF+A+ + L A
Sbjct: 63 IVLMDASGFPLLSIRRKKLSLGDCWMVYDGETE--RDPIFTARKNVSIISNRKSLAWVSA 120
Query: 124 NNTREDVCDFRVVEGSSWLFEPSSCTIY-AGKSSAIVAQMLEKQTV-KSIFLGKNNFMVT 181
T +EGS + SC I ++ A++ K+TV + GK+ + +
Sbjct: 121 KKTV-----LYEIEGS---YGQRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKLI 172
Query: 182 VHPNVDYAFIVALIVILDEINRA 204
V ++ +AL +ILD++ R+
Sbjct: 173 VESEMEPRVAMALTIILDQMFRS 195
>sp|A0MFH4|LOR16_ARATH Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640
PE=2 SV=2
Length = 215
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 19 SSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLL-DGAGNPIATI 77
SS L + R+ + + G F V ++ ++F+V + ++LL +G GN + I
Sbjct: 18 SSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGDGNDLLLI 77
Query: 78 RE-----KAMSR-HRRWQVFRGESS----------DPRD--LIFSAKISSLWSFKTTKLN 119
R+ +A++ H +W+ F ++ DP+D L+ ++ I L K K++
Sbjct: 78 RKMGGIVQALNMVHNKWEGFGYDNEGTERLVFTLKDPKDSCLVQNSSIKILVHGKPPKIS 137
Query: 120 VFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFM 179
+TR + + ++GS F +C I AI +EK+ + + K+ +
Sbjct: 138 -----STRNNYVE---IKGS---FAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYH 186
Query: 180 VTVHPNVDYAFIVALIVILDEIN 202
V V PNVD +FIV LI ILD I+
Sbjct: 187 VIVKPNVDQSFIVGLIAILDYIH 209
>sp|A0MFL4|LOR17_ARATH Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590
PE=2 SV=2
Length = 221
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 26 LAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATI-REKAMSR 84
L + RK ++ S F V D+NG+++++V N +L+D GN + + R K ++
Sbjct: 39 LTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYARTRPEELILMDKDGNSLLLMHRTKKITL 98
Query: 85 HRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDF----------- 133
W ++ E++D + K + + K K+N+ +T+ D+ +
Sbjct: 99 VDSWGIY--EANDTKGETKIPKCPTWYMRKNLKMNIL---STKSDILAYVYSGSFDKKNS 153
Query: 134 RVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQT-VKSIFLGKNNFMVTVHPNVDYAFIV 192
+++GS + SC I + V ++ K+ K + G + F + V+P D +
Sbjct: 154 YIIKGS---YRCKSCKIVHVPLNKTVVEIKRKEVRTKGVRFGSDVFDLVVNPGFDTGLAM 210
Query: 193 ALIVILDEI 201
AL+++LD++
Sbjct: 211 ALVLLLDQM 219
>sp|Q9LUM1|LOR11_ARATH Protein LURP-one-related 11 OS=Arabidopsis thaliana GN=At3g14260
PE=2 SV=1
Length = 230
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 30/192 (15%)
Query: 26 LAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRH 85
I K ++F++ V D+ GNI+++V N + R L+D +G+ + T+R +
Sbjct: 51 FTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYNSKSCREVYLMDLSGHVLFTLRRQKFGLF 110
Query: 86 RRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANN---------------TREDV 130
+ W+ +R S+ + + ++ + K NVF N E
Sbjct: 111 KTWEGYRSSSA-------TVESTTKLEYFRVKNNVFQVPNKDSSSSYRVNAGSCRNDEQY 163
Query: 131 CDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAF 190
C V GSS E + GK ++A++ KQ++ + LG + + V VD++F
Sbjct: 164 CYKMVTRGSSLAIEDN-----CGK---LLAEVKRKQSINGLKLGDDVLTMMVESQVDHSF 215
Query: 191 IVALIVILDEIN 202
I+ L++ IN
Sbjct: 216 IIGLVLAHSLIN 227
>sp|Q8GWL2|LOR7_ARATH Protein LURP-one-related 7 OS=Arabidopsis thaliana GN=At2g30270
PE=2 SV=1
Length = 182
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 23 PIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAM 82
P+DL +K+ SSG+ D++ +++F ++ + ++ +G P+ +I +
Sbjct: 19 PVDLFASKKLPGLSSGDLGFADSSEHLVFILRKSSSSLKSLLD---SSGVPLFSI---SR 72
Query: 83 SRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWL 142
+ W++ +G+ +DL+ + K +S F T+ V A + E++ V++G +
Sbjct: 73 LHNGVWELHKGDVEKRKDLVLTVKRTS-KRFSKTESEVSFAGESSENL----VIKGVPF- 126
Query: 143 FEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHP-NVDYAFIVALIVIL 198
SCTIY+ S IVAQ ++ I++G++ F +T+ P ++D++ +VA++ I
Sbjct: 127 --QKSCTIYSQDS--IVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIF 179
>sp|Q9SH27|LOR4_ARATH Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410
PE=3 SV=1
Length = 215
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 30/177 (16%)
Query: 31 KVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQV 90
K +++ + V ++NG I ++V+N + ++D GN + TIR+K + W V
Sbjct: 27 KSLVYQTNGLTVYNSNGEITYRVEN-YDKCSNEVHIMDLHGNILFTIRKKKLWLFGSWYV 85
Query: 91 FR--GESSDPRDLIFSAKI--SSL----WSFKTTKLNVFLANNTREDVCDFRVVEGSSWL 142
+R G + ++ A+I SS+ W + VF W+
Sbjct: 86 YRECGSFTSTEEVKPCARIKRSSIRDGDWEVRDETNEVF-------------------WI 126
Query: 143 --FEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVI 197
F+P I+AQ+ KQ+ I LG++ + V P VD++ +V L+ +
Sbjct: 127 LRFDPKFAFQIIDIHGNIIAQVKPKQSSNGITLGEDVLTLEVKPRVDHSLVVTLVTV 183
>sp|Q9ZUF7|LOR6_ARATH Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910
PE=2 SV=1
Length = 191
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
Query: 26 LAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAF-MRRRRVLLDGAGNPIATIREK---- 80
+ + R+ + + G F V D I+FK+ + VL D GN + I +K
Sbjct: 17 MVVRRRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGTKGELVLRDSDGNDLLLIHKKGGVV 76
Query: 81 -AMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVF-LANNTREDV----CDFR 134
A+S H +W +G S D + +++ + K + F + ++ R V C F
Sbjct: 77 QALSIHNKW---KGYSYD-----YQGSPKPVFTLRDPKHSCFSITSSIRISVGPGNCYFD 128
Query: 135 VVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVAL 194
V F C+I K + ++AQ VK ++ + V P+VD AF+ +
Sbjct: 129 V----KGYFPDRDCSIVDSKGN-VIAQ------VKEWIGSRDIYKVVTKPSVDKAFVFGV 177
Query: 195 IVILDEI 201
I +LD I
Sbjct: 178 IAVLDYI 184
>sp|Q55058|URED_STRE5 Urease accessory protein UreD OS=Streptococcus salivarius (strain
57.I) GN=ureD PE=3 SV=1
Length = 279
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 18/135 (13%)
Query: 84 RHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLF 143
R R +Q R + LI+S +++ WS + N + D +V L
Sbjct: 118 RSRYFQTSRIDMDKSAHLIYSDGVTAGWSHEDLPFQYHYFRNLTQIYQDDELVYSDQTLL 177
Query: 144 EPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNF--MVTVHPNVDYAFIVALIVILDEI 201
EP ++ F G N+ +V V PN+D AF+ AL L+ +
Sbjct: 178 EPQKQDMFK----------------LGYFEGWRNYNSLVMVSPNIDEAFVKALQKHLENL 221
Query: 202 NRAGSGSSSSGGVAG 216
N + SS + G
Sbjct: 222 NLESDFAISSLDIPG 236
>sp|Q5M603|URED_STRT2 Urease accessory protein UreD OS=Streptococcus thermophilus (strain
ATCC BAA-250 / LMG 18311) GN=ureD PE=3 SV=1
Length = 279
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 22/137 (16%)
Query: 84 RHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLF 143
+ R +Q R + LI+S +++ WS + N + D +V L
Sbjct: 118 KSRYFQTSRIDMDKSAHLIYSDGVTAGWSHEDLPFQYHYFRNLTQIYQDNELVYSDQTLL 177
Query: 144 EPSSCTIYAGKSSAIVAQMLEKQTVKSI--FLGKNNF--MVTVHPNVDYAFIVALIVILD 199
EP EKQ + + F G N+ +V V PN+D AF+ AL L+
Sbjct: 178 EP------------------EKQDMFKLGYFEGWRNYNSLVMVSPNIDEAFVKALQKHLE 219
Query: 200 EINRAGSGSSSSGGVAG 216
+N + SS ++G
Sbjct: 220 GLNLESDFAISSLDISG 236
>sp|Q67XV7|LOR3_ARATH Protein LURP-one-related 3 OS=Arabidopsis thaliana GN=At1g53890
PE=2 SV=2
Length = 217
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 26 LAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRV-LLDGAGNPIATIREKAMSR 84
I K ++F+S V D+ GN++++V N + V +D G + T+R+K +
Sbjct: 44 FTIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSWSNEVYFMDLNGKILFTLRQKKLGF 103
Query: 85 HRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLF- 143
+ W+ + + F+ K+ L RE ++VV GS +
Sbjct: 104 FKSWEGYNSTGT---------------RFRLRKIFKILP---RESSSSYKVVMGSRIVDG 145
Query: 144 EPSSC-------TIYAGK--SSAIVAQMLEKQT-VKSIFLGKNNFMVTVHPNVDYAFIVA 193
+ SC +++A K S ++A++ K + + + LG + + V P +D++ I+
Sbjct: 146 DQQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMG 205
Query: 194 LIV 196
+++
Sbjct: 206 IVI 208
>sp|Q8LG32|LOR2_ARATH Protein LURP-one-related 2 OS=Arabidopsis thaliana GN=At1g53870
PE=2 SV=2
Length = 217
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 26 LAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRV-LLDGAGNPIATIREKAMSR 84
I K ++F+S V D+ GN++++V N + V +D G + T+R+K +
Sbjct: 44 FTIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSWSNEVYFMDLNGKILFTLRQKKLGF 103
Query: 85 HRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLF- 143
+ W+ + + F+ K+ L RE ++VV GS +
Sbjct: 104 FKSWEGYNSTGT---------------RFRLRKIFKILP---RESSSSYKVVMGSRIVDG 145
Query: 144 EPSSC-------TIYAGK--SSAIVAQMLEKQT-VKSIFLGKNNFMVTVHPNVDYAFIVA 193
+ SC +++A K S ++A++ K + + + LG + + V P +D++ I+
Sbjct: 146 DQQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMG 205
Query: 194 LIV 196
+++
Sbjct: 206 IVI 208
>sp|Q03MD9|URED_STRTD Urease accessory protein UreD OS=Streptococcus thermophilus (strain
ATCC BAA-491 / LMD-9) GN=ureD PE=3 SV=1
Length = 279
Score = 33.9 bits (76), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 22/137 (16%)
Query: 84 RHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLF 143
+ R +Q R + LI+S +++ WS + N + D +V L
Sbjct: 118 KSRYFQKSRIDMDKSAHLIYSDGVTAGWSHEDLPFQYHYFRNLTQIYQDNELVYSDQTLL 177
Query: 144 EPSSCTIYAGKSSAIVAQMLEKQTVKSI--FLGKNNF--MVTVHPNVDYAFIVALIVILD 199
EP EKQ + + F G N+ +V V PN+D AF+ AL L+
Sbjct: 178 EP------------------EKQDMFKLGYFEGWRNYNSLVMVSPNIDEAFVKALQKHLE 219
Query: 200 EINRAGSGSSSSGGVAG 216
+N + SS ++G
Sbjct: 220 GLNLESDFAISSLDISG 236
>sp|Q5M1G2|URED_STRT1 Urease accessory protein UreD OS=Streptococcus thermophilus (strain
CNRZ 1066) GN=ureD PE=3 SV=1
Length = 279
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 22/137 (16%)
Query: 84 RHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLF 143
+ R +Q R + LI+S +++ WS + N + D +V L
Sbjct: 118 KSRYFQTSRIDMDKSAHLIYSDGVTAGWSHEDLPFQYHYFRNLTQIYQDNELVYSDQTLL 177
Query: 144 EPSSCTIYAGKSSAIVAQMLEKQTVKSI--FLGKNNF--MVTVHPNVDYAFIVALIVILD 199
EP EKQ + + F G N+ +V V PN+D F+ AL L+
Sbjct: 178 EP------------------EKQDMFKLGYFEGWRNYNSLVMVSPNIDETFVKALQKHLE 219
Query: 200 EINRAGSGSSSSGGVAG 216
+N + SS ++G
Sbjct: 220 GLNLESDFAISSLDISG 236
>sp|E0SQX5|ECR1_IGNAA Probable exosome complex RNA-binding protein 1 OS=Ignisphaera
aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1)
GN=Igag_1503 PE=3 SV=1
Length = 253
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 134 RVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVA 193
+VV+GS EP GK +++ ++E QT I +G N ++ PN + +I
Sbjct: 158 KVVDGSLIEIEPIKVARVIGKKKSMLNMLIE-QTKCDILVGNNGRIILRCPNPELEYIAI 216
Query: 194 L 194
L
Sbjct: 217 L 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,976,355
Number of Sequences: 539616
Number of extensions: 3141591
Number of successful extensions: 16358
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 16302
Number of HSP's gapped (non-prelim): 36
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)