Your job contains 1 sequence.
>044782
MLQFPERDESGPEKRNKFDLELSELPSDPRQRPPISSYNPNHVGGPNSAHNKAVGYCEDL
MKQEQHVRTFFNKHSDQDRLLLEQGLAFRGHDESDNSSNQGNYLRILRFLADHNEDIKKV
TLKNAPGNNMLTAPSIQKDIVRACSIETTNAIFRDVGDALFYVLIDESRDASMKEQMSVV
LRYVDKNEFVIERFIGLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQEKQLLSVVEAL
ENDDLPSGQGQNQEITLKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNSSEQR
FQANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQMM
RDNGWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREISNMHYFRVELFFAVLDL
QLQELNN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044782
(427 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2202165 - symbol:AT1G19260 species:3702 "Arabi... 476 1.3e-93 3
TAIR|locus:2829839 - symbol:AT3G29763 "AT3G29763" species... 452 7.2e-86 2
TAIR|locus:2093847 - symbol:AT3G29450 "AT3G29450" species... 451 1.8e-73 3
TAIR|locus:2033523 - symbol:AT1G41920 "AT1G41920" species... 448 6.0e-72 2
TAIR|locus:2829849 - symbol:AT3G29765 species:3702 "Arabi... 432 1.4e-66 2
TAIR|locus:4515102803 - symbol:AT2G06541 species:3702 "Ar... 495 2.6e-47 1
TAIR|locus:2118430 - symbol:AT4G09660 species:3702 "Arabi... 448 3.1e-46 2
TAIR|locus:2036700 - symbol:AT1G42710 "AT1G42710" species... 161 2.7e-25 2
UNIPROTKB|Q5SW02 - symbol:ZMYM1 "Zinc finger MYM-type pro... 174 7.0e-19 2
UNIPROTKB|Q5SVZ6 - symbol:ZMYM1 "Zinc finger MYM-type pro... 174 8.3e-19 2
UNIPROTKB|E1BC73 - symbol:ZMYM1 "Uncharacterized protein"... 176 6.7e-18 2
UNIPROTKB|E2R5I7 - symbol:ZMYM1 "Uncharacterized protein"... 166 2.3e-17 2
TAIR|locus:5019474775 - symbol:AT3G31402 "AT3G31402" spec... 188 1.7e-15 2
RGD|1307027 - symbol:Zmym1 "zinc finger, MYM-type 1" spec... 130 1.8e-10 2
UNIPROTKB|E2RFZ3 - symbol:PRKRIR "Uncharacterized protein... 126 5.8e-09 2
UNIPROTKB|O43422 - symbol:PRKRIR "52 kDa repressor of the... 125 3.1e-08 2
TAIR|locus:5019474771 - symbol:AT3G30235 "AT3G30235" spec... 134 3.4e-08 1
UNIPROTKB|E1C7U9 - symbol:PRKRIR "Uncharacterized protein... 104 4.4e-08 3
UNIPROTKB|F1SUL6 - symbol:PRKRIR "Uncharacterized protein... 124 5.0e-08 2
UNIPROTKB|E1BL80 - symbol:PRKRIR "Uncharacterized protein... 124 1.0e-07 2
UNIPROTKB|B4DS64 - symbol:PRKRIR "Protein-kinase, interfe... 115 1.9e-07 2
RGD|1309679 - symbol:Prkrir "protein-kinase, interferon-i... 110 4.0e-07 2
TAIR|locus:2054567 - symbol:AT2G06500 species:3702 "Arabi... 146 6.6e-07 1
MGI|MGI:1920231 - symbol:Prkrir "protein-kinase, interfer... 105 1.0e-06 3
TAIR|locus:2203289 - symbol:AT1G35150 "AT1G35150" species... 107 4.1e-05 2
ZFIN|ZDB-GENE-060526-125 - symbol:si:ch211-240b21.2 "si:c... 128 0.00012 2
>TAIR|locus:2202165 [details] [associations]
symbol:AT1G19260 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR008906 InterPro:IPR012337 Pfam:PF05699 EMBL:CP002684
GO:GO:0009506 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 InterPro:IPR006580 SMART:SM00597 IPI:IPI00526041
RefSeq:NP_173360.1 UniGene:At.70426 ProteinModelPortal:F4IE28
EnsemblPlants:AT1G19260.1 GeneID:838509 KEGG:ath:AT1G19260
OMA:ATENIAQ Uniprot:F4IE28
Length = 769
Score = 476 (172.6 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 103/204 (50%), Positives = 135/204 (66%)
Query: 42 HVG-GPNSAHNKAVGYCEDLMKQEQHV---------------RTFFNKHSDQDRLLLEQG 85
HVG NS HN A CEDLM+Q Q + R + N D R LL QG
Sbjct: 129 HVGLDVNSFHNNAKRKCEDLMRQGQSIKHALHKQTDVVKNDYRIWLNASIDVSRHLLHQG 188
Query: 86 LAFRGHDESDNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDIVRACS 145
L FRGHDES+ S+N+GN++ +L++ A NE +KKV LKNAP NN +T+P IQKDIV S
Sbjct: 189 LPFRGHDESEESTNKGNFVELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFS 248
Query: 146 IETTNAIFRDVGDALFYVLIDESRDASMKEQMSVVLRYVDKNEFVIERFIGLKHVTSTTA 205
E T +I ++ + +F +L+DES DAS KEQM+VV R+VDK V ERFIG+ HV T++
Sbjct: 249 KEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGVIHVQETSS 308
Query: 206 ISLKEALDQLFSKHGLSISRLRGQ 229
+SLK A+D LF+K+GLS+ +LRGQ
Sbjct: 309 LSLKSAIDSLFAKYGLSLKKLRGQ 332
Score = 429 (156.1 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 85/192 (44%), Positives = 133/192 (69%)
Query: 236 VVEALENDDLPSGQGQNQEITLKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSN 295
V E + N ++ +G G NQE++L+R G+T+WGSHY TLL + LF I+ VLE + +D+
Sbjct: 414 VEEKISNGEIKTGTGLNQELSLQRPGNTRWGSHYKTLLRLEELFSSIVIVLEYI-QDEGT 472
Query: 296 SSEQRFQANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKK 355
+ +R QA ++++ +FDFV L LM ++ L++ LS+ALQRKDQDILNAI LV+ K
Sbjct: 473 DTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQRKDQDILNAISLVKTTKC 532
Query: 356 NLQMMRDNGWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREISNMHYFRVELFF 415
LQ +RD+GWD+ +++ SSF K++ + M + F+ R R+K I+N+H+++V+ F+
Sbjct: 533 QLQKVRDDGWDAFMAKVSSFSEKNNTGMLKMEEEFVDSRRPRKKTG-ITNLHHYKVDCFY 591
Query: 416 AVLDLQLQELNN 427
VLD+QLQE N+
Sbjct: 592 TVLDMQLQEFND 603
Score = 76 (31.8 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 19 DLELSELPSDPRQRPPISSYNPN 41
D+ L+ELPSDP +R I SY+PN
Sbjct: 14 DINLNELPSDPAKRKSILSYHPN 36
>TAIR|locus:2829839 [details] [associations]
symbol:AT3G29763 "AT3G29763" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AB028618 InterPro:IPR025398 Pfam:PF14291 eggNOG:NOG67438
HOGENOM:HOG000238438 IPI:IPI00525782 RefSeq:NP_189620.1
UniGene:At.65185 ProteinModelPortal:Q3EAW7
EnsemblPlants:AT3G29763.1 GeneID:822665 KEGG:ath:AT3G29763
TAIR:At3g29763 InParanoid:Q3EAW7 OMA:MVEICES PhylomeDB:Q3EAW7
Genevestigator:Q3EAW7 Uniprot:Q3EAW7
Length = 505
Score = 452 (164.2 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 93/189 (49%), Positives = 131/189 (69%)
Query: 41 NHVGGPNSAHNKAVGYCEDLMKQEQHVRTFFNKHSDQDRLLLEQGLAFRGHDESDNSSNQ 100
+H G +A +K +++K + +R N D R LL QGL FRGHDES+ S+N+
Sbjct: 18 SHCSGSATALHKQT----NVVKNDYRIR--LNASIDVSRHLLHQGLPFRGHDESEESTNK 71
Query: 101 GNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDIVRACSIETTNAIFRDVGDAL 160
GN+L +L+++A NE +KKV LKNAP NN +T+P IQKDIV S E T +I ++ + +
Sbjct: 72 GNFLELLKYIAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSIIEEMDNDV 131
Query: 161 FYVLIDESRDASMKEQMSVVLRYVDKNEFVIERFIGLKHVTSTTAISLKEALDQLFSKHG 220
F +L+DES DAS KEQM+VV R+VDK V ERFIG+ HV T+++SLK A+D LF+K+G
Sbjct: 132 FGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGVIHVQETSSLSLKSAIDSLFAKYG 191
Query: 221 LSISRLRGQ 229
LS+ +LRG+
Sbjct: 192 LSLKKLRGK 200
Score = 426 (155.0 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 88/203 (43%), Positives = 137/203 (67%)
Query: 225 RLRGQEKQLLSVVEALENDDLPSGQGQNQEITLKRFGDTQWGSHYGTLLHIISLFPHIIS 284
++R ++Q V E + N ++ +G NQE++L+R G+T+WGSHY TLL + LF I+
Sbjct: 273 KIREIDRQ--KVEEKISNGEIKTGTRLNQELSLQRPGNTRWGSHYKTLLRLEELFSSIVI 330
Query: 285 VLEIVAKDKSNSSEQRFQANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDIL 344
VLE + +D+ + +R QA ++++ +FDFV L LM ++ LS+ LS+A QRKDQDIL
Sbjct: 331 VLEYI-QDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLSDSLSKAWQRKDQDIL 389
Query: 345 NAIKLVEICKKNLQMMRDNGWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREIS 404
NAI LV+ K LQ +RD+GWD+ ++E SSF K +I + M + F+ R R+K I+
Sbjct: 390 NAISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKTNIGMLKMEEEFVDSRRPRKKTG-IT 448
Query: 405 NMHYFRVELFFAVLDLQLQELNN 427
N+H+++V+ F+ VLD+QLQE N+
Sbjct: 449 NLHHYKVDCFYTVLDMQLQEFND 471
>TAIR|locus:2093847 [details] [associations]
symbol:AT3G29450 "AT3G29450" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 UniGene:At.53572
IPI:IPI00527525 RefSeq:NP_189591.1 ProteinModelPortal:F4J326
EnsemblPlants:AT3G29450.1 GeneID:822606 KEGG:ath:AT3G29450
OMA:ICLRILA Uniprot:F4J326
Length = 522
Score = 451 (163.8 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 93/203 (45%), Positives = 140/203 (68%)
Query: 225 RLRGQEKQLLSVVEALENDDLPSGQGQNQEITLKRFGDTQWGSHYGTLLHIISLFPHIIS 284
R+R + ++ L E + ++ +G+G NQ+++L+R G+T+WG+HY TLL ++ LF II
Sbjct: 289 RVRDEFRKKLE--ERINQGEIKTGKGLNQKLSLQRPGNTRWGTHYTTLLRLVDLFSVIIK 346
Query: 285 VLEIVAKDKSNSSEQRFQANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDIL 344
VLE + D ++S+++R QAN L+++ +FDFV L LM IL L+N LS ALQRKDQDIL
Sbjct: 347 VLEWIEDDGTDSTKRR-QANGLLKYFNTFDFVFYLQLMLLILGLTNSLSVALQRKDQDIL 405
Query: 345 NAIKLVEICKKNLQMMRDNGWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREIS 404
NA+ LV+ K+ L +RD+GWDS L+E SFC HDI+ M+ F+ R RK ++
Sbjct: 406 NAMSLVKSTKQQLFKLRDDGWDSFLNEVFSFCKDHDIEFVIMDGEFVD-PRKPRKKSNMT 464
Query: 405 NMHYFRVELFFAVLDLQLQELNN 427
N+H+++VE F VLD+Q+QE N+
Sbjct: 465 NLHHYQVECFNTVLDMQIQEFND 487
Score = 249 (92.7 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 56/148 (37%), Positives = 86/148 (58%)
Query: 38 YNPNHVGGPNSAHNKAVGYCEDLMKQEQHV---RTFFN---KHSDQDRLLLEQGLAFRGH 91
Y N GG ++ K ++ +HV +F N K +D + QGL FRGH
Sbjct: 42 YTENK-GGSDTFVTKGFDTWKNPQSLREHVGLVNSFHNNALKRADCLMRQVRQGLPFRGH 100
Query: 92 DESDNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDIVRACSIETTNA 151
DES +S+N+ N+L ++++ A NE + K+ L+NAP NN + P IQKDIV + E +
Sbjct: 101 DESVDSANRENFLELVKYTAGQNEAVSKIVLENAPKNNQMACPKIQKDIVHCFAEEVIRS 160
Query: 152 IFRDVGDALFYVLIDESRDASMKEQMSV 179
I ++V +F++++DES D S KEQM+V
Sbjct: 161 IIQEVDHDVFWLMVDESADISDKEQMAV 188
Score = 73 (30.8 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 207 SLKEALDQLFSKHGLSISRLRGQ 229
SLK A+D LF+K GLSI +LRGQ
Sbjct: 194 SLKCAIDSLFAKLGLSIKQLRGQ 216
Score = 45 (20.9 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 11/51 (21%), Positives = 31/51 (60%)
Query: 166 DESRDASMKEQMSVVLRYVDKNEFV--IERFIGLKHVTSTTAISLKEALDQ 214
D+ D++ + Q + +L+Y + +FV ++ + + +T++ +++L+ DQ
Sbjct: 353 DDGTDSTKRRQANGLLKYFNTFDFVFYLQLMLLILGLTNSLSVALQRK-DQ 402
Score = 43 (20.2 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 19/91 (20%), Positives = 40/91 (43%)
Query: 206 ISLKEALDQLFSKHGLSISRLRGQEKQLLSVVEALENDDLPSGQGQNQEITLKRFGDTQW 265
+SL+ + + H ++ RL ++ V+E +E+D S + + LK F +
Sbjct: 317 LSLQRPGNTRWGTHYTTLLRLVDLFSVIIKVLEWIEDDGTDSTKRRQANGLLKYFNTFDF 376
Query: 266 GSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
+ +L I+ L + L+ +D N+
Sbjct: 377 VFYLQLMLLILGLTNSLSVALQRKDQDILNA 407
Score = 42 (19.8 bits), Expect = 8.4e-52, Sum P(3) = 8.4e-52
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 145 SIETTNAIFRDVGDALFYVLIDESRDASMKEQMSVVLRYV-DKNEFV 190
+++ + + R V L + DES D++ +E +++Y +NE V
Sbjct: 80 ALKRADCLMRQVRQGLPFRGHDESVDSANRENFLELVKYTAGQNEAV 126
>TAIR|locus:2033523 [details] [associations]
symbol:AT1G41920 "AT1G41920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002684 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 IPI:IPI00537363
RefSeq:NP_174954.1 UniGene:At.51289 ProteinModelPortal:F4I7X4
PRIDE:F4I7X4 EnsemblPlants:AT1G41920.1 GeneID:840805
KEGG:ath:AT1G41920 OMA:DESANRG PhylomeDB:F4I7X4 Uniprot:F4I7X4
Length = 496
Score = 448 (162.8 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 88/201 (43%), Positives = 140/201 (69%)
Query: 227 RGQEKQLLSVVEALENDDLPSGQGQNQEITLKRFGDTQWGSHYGTLLHIISLFPHIISVL 286
R +E+ L + E + ++ +G+G NQE++L+R G+T+WG+HY TL + LF II +L
Sbjct: 230 RIREEYLKEIEEGINQGEIKTGKGLNQELSLQRPGNTRWGTHYTTLHRLAHLFSVIIKLL 289
Query: 287 EIVAKDKSNSSEQRFQANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNA 346
E V ++ ++S+++R QAN L+++ +FDF L LM +L L+N LS ALQ+KDQDILN
Sbjct: 290 EFVEEEGTDSTKRR-QANGLLKYFNTFDFAFYLQLMLLLLGLTNSLSVALQKKDQDILNP 348
Query: 347 IKLVEICKKNLQMMRDNGWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREISNM 406
+ LV+ K+ L +RD+GWDSL++E SFC KHDI++ M+ F+ R+ RK ++N
Sbjct: 349 MSLVKSTKQQLCKLRDDGWDSLVNEVFSFCKKHDIELVIMDGEFVN-PRNPRKRSNMTNF 407
Query: 407 HYFRVELFFAVLDLQLQELNN 427
H+++VE F+ +LD+Q+QE N+
Sbjct: 408 HHYQVECFYTILDMQIQEFND 428
Score = 298 (110.0 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 67/154 (43%), Positives = 97/154 (62%)
Query: 79 RLLLEQGLAFRGHDESDNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQK 138
R L+ Q L FRGHDESD S+N+GN+L ++++ NE I KV L+NAP NN + + +
Sbjct: 5 RYLVRQRLPFRGHDESDESANRGNFLELVKYTVGQNEVISKVVLENAPKNNQMVFDEMSE 64
Query: 139 DIVRACSIETTNAIFRDVGDALFYVLIDESR---DASMKEQMSVVLRYVDKNEFVIERFI 195
++ + + F + L Y ++ + + S KEQM+VV R+VDK+ V ERFI
Sbjct: 65 PLIPETR-DPVPSSFLLLDLILDYPVVWQQTVQSNVSDKEQMAVVFRFVDKHGTVKERFI 123
Query: 196 GLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
GL HV T++ SLK A+D LF+K GLS+ +LRGQ
Sbjct: 124 GLIHVKETSSASLKCAIDSLFAKRGLSMKQLRGQ 157
Score = 43 (20.2 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 78 DRLLLEQGLAFR-----GHDESDNSSNQGNYLRIL 107
D L ++GL+ + G+D ++N + N+LR L
Sbjct: 141 DSLFAKRGLSMKQLRGQGYDGANNMKGEFNWLRSL 175
>TAIR|locus:2829849 [details] [associations]
symbol:AT3G29765 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AB028618 InterPro:IPR025398 Pfam:PF14291 eggNOG:NOG67438
IPI:IPI00538238 RefSeq:NP_189621.1 UniGene:At.65186
ProteinModelPortal:Q3E6V3 EnsemblPlants:AT3G29765.1 GeneID:822666
KEGG:ath:AT3G29765 TAIR:At3g29765 HOGENOM:HOG000238438
InParanoid:Q3E6V3 OMA:WKEQMAV PhylomeDB:Q3E6V3
Genevestigator:Q3E6V3 Uniprot:Q3E6V3
Length = 536
Score = 432 (157.1 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 88/203 (43%), Positives = 138/203 (67%)
Query: 225 RLRGQEKQLLSVVEALENDDLPSGQGQNQEITLKRFGDTQWGSHYGTLLHIISLFPHIIS 284
++R ++Q V E + N ++ +G G NQE++L+R G+T+WGSHY TLL + LF I+
Sbjct: 172 KIREIDRQ--KVEEKISNGEIKTGTGLNQELSLQRPGNTRWGSHYKTLLRLEELFSSIVI 229
Query: 285 VLEIVAKDKSNSSEQRFQANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDIL 344
VLE + +D+ + +R QA ++++ +FDFV L LM ++ L++ LS+ALQRKDQDIL
Sbjct: 230 VLEYI-QDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQRKDQDIL 288
Query: 345 NAIKLVEICKKNLQMMRDNGWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREIS 404
NAI LV+ K LQ +RD+GWD+ ++E SSF K + + M + F+ R R+K I+
Sbjct: 289 NAISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKTNTGMLKMEEEFVDSRRPRKKTG-IT 347
Query: 405 NMHYFRVELFFAVLDLQLQELNN 427
N+H+++V+ F+ VLD+QLQE N+
Sbjct: 348 NLHHYKVDCFYTVLDMQLQEFND 370
Score = 263 (97.6 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 53/99 (53%), Positives = 74/99 (74%)
Query: 131 LTAPSIQKDIVRACSIETTNAIFRDVGDALFYVLIDESRDASMKEQMSVVLRYVDKNEFV 190
+T+P IQKDIV S E T +I ++ + +F +L+DES DAS KEQM+VV R+VDK V
Sbjct: 1 MTSPPIQKDIVHCFSEEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVV 60
Query: 191 IERFIGLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
ERFIG+ HV T+++SLK A+D LF+K+GLS+ +LRG+
Sbjct: 61 KERFIGVIHVQETSSLSLKSAIDSLFAKYGLSLKKLRGK 99
>TAIR|locus:4515102803 [details] [associations]
symbol:AT2G06541 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR008906 InterPro:IPR012337
Pfam:PF05699 EMBL:CP002685 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR025398 Pfam:PF14291 InterPro:IPR006580 SMART:SM00597
IPI:IPI00938992 RefSeq:NP_001154499.1 UniGene:At.53572
UniGene:At.69256 ProteinModelPortal:F4IJB0
EnsemblPlants:AT2G06541.1 GeneID:6240332 KEGG:ath:AT2G06541
OMA:YDESKES Uniprot:F4IJB0
Length = 592
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 139/369 (37%), Positives = 199/369 (53%)
Query: 42 HVGGPNSAHNKAVGYCEDLMKQEQH-VRTFF--------------NKHSDQDRLLLEQGL 86
HVG NS HN A+ + LM+Q Q V F+ N D R L+ QGL
Sbjct: 63 HVGLVNSFHNNALKRADCLMRQGQSIVHAFYKQDDIVKGEYRIRLNASIDCCRYLVRQGL 122
Query: 87 AFRGHDESDNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDIVRACSI 146
FRGHDES +S+N+GN+L ++++ A NE + KV L+NAP NN + P IQ+DIV
Sbjct: 123 TFRGHDESVDSANRGNFLELVKYTAGQNEVVSKVVLENAPKNNQMVCPKIQRDIVHCFVE 182
Query: 147 ETTNAIFRDVGDALFYVLIDESRDASMKEQMSVVLRYVDKNEFVIERFIGLKHVTSTTAI 206
E +I ++V +F +++DES D KEQM VV R+VDK+ V ERFIGL HV T +
Sbjct: 183 EVIRSIIQEVDHDVFCLMVDESADIFDKEQMVVVFRFVDKHATVKERFIGLIHVKETFSA 242
Query: 207 SLKEALDQLFSKHGLSISRLRGQEKQLLSVVEA----------LENDDLPSGQGQNQEIT 256
LK A+D LF+KHGLSI ++RGQ+ S ++ EN ++
Sbjct: 243 FLKCAIDSLFAKHGLSIKQIRGQDYDGASNMKGEFNGLRYLILRENSSAYYIHCFAHQLQ 302
Query: 257 LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNSSEQ-RFQANNLIEFMQSFDF 315
L + G +IS+ +I+V+E K K ++ R + I + F F
Sbjct: 303 LVVVAVAKKHFEIGDFFDMISV---LINVVEASCKRKDRVRDEFRKKLEEGINQVDLFSF 359
Query: 316 VLS-LYLMRDILALSNELSQA---LQRKDQDILNAIKLVEICKKNLQMMRDNGWDSLLSE 371
++ L + D S + QA LQRKDQDILNA+ LV+ K++L +RD+GWDS L+E
Sbjct: 360 IIKMLEWIEDDGTDSTKRRQANVALQRKDQDILNAMSLVKSTKQHLFNLRDDGWDSFLNE 419
Query: 372 ASSFCLKHD 380
F L+++
Sbjct: 420 V--FLLEYN 426
>TAIR|locus:2118430 [details] [associations]
symbol:AT4G09660 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012337 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AL161515 EMBL:AL049482 InterPro:IPR025398 Pfam:PF14291
eggNOG:NOG67438 InterPro:IPR006580 SMART:SM00597
HOGENOM:HOG000238438 IPI:IPI00537787 PIR:T04013 RefSeq:NP_192704.1
UniGene:At.54235 ProteinModelPortal:Q9SZ82
EnsemblPlants:AT4G09660.1 GeneID:826552 KEGG:ath:AT4G09660
TAIR:At4g09660 InParanoid:Q9SZ82 OMA:QANDANL PhylomeDB:Q9SZ82
ProtClustDB:CLSN2682451 Genevestigator:Q9SZ82 Uniprot:Q9SZ82
Length = 664
Score = 448 (162.8 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 95/192 (49%), Positives = 132/192 (68%)
Query: 44 GGPNSAHNKAVGYCE--DLMKQEQHVRTFFNK-HSDQDRL---LLEQGLAFRGHDESDNS 97
GG +S + G+C + +QHV N H++ R L+ QGL+FRGHDES+ S
Sbjct: 107 GGSDSF--LSTGFCSWNKADRLDQHVGLDVNSFHNNAKRKCEDLMRQGLSFRGHDESEES 164
Query: 98 SNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDIVRACSIETTNAIFRDVG 157
+N+GN+L +L++ A NE +KKV LKNAP NN +T+P IQKDIV S E T +I ++
Sbjct: 165 TNKGNFLELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSIIEEMD 224
Query: 158 DALFYVLIDESRDASMKEQMSVVLRYVDKNEFVIERFIGLKHVTSTTAISLKEALDQLFS 217
+ +F +L+DES DAS KEQM+VV R+VDK V ERFIG+ HV T+++SLK A+D LF+
Sbjct: 225 NDVFGLLVDESADASNKEQMTVVFRFVDKYGVVKERFIGVIHVKETSSLSLKSAIDSLFA 284
Query: 218 KHGLSISRLRGQ 229
K+GLS+ +LRGQ
Sbjct: 285 KYGLSLKKLRGQ 296
Score = 426 (155.0 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 97/246 (39%), Positives = 153/246 (62%)
Query: 186 KNEFVIERFIGLKHVTSTTAISLKEALDQ---LFSKHGLSISRL-RGQEKQLLSVVEALE 241
K EF R + LK + + + E D L + G S +R + +E V E +
Sbjct: 305 KGEFNGLRSLILKEIAKKH-VEVGEFFDMISVLLNVVGASCTRKDKIREIHRQKVEEKIS 363
Query: 242 NDDLPSGQGQNQEITLKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNSSEQRF 301
N ++ +G NQE++L+R G+T+WGSHY TLL + LF I+ VLE + +D+ + +R
Sbjct: 364 NGEIKTGTRLNQELSLQRPGNTRWGSHYKTLLRLEELFSSIVIVLEYI-QDEGTDTTKRQ 422
Query: 302 QANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQMMR 361
QA ++++ +FDFV L LM ++ L++ LS+ALQRKDQDILN I LV+ K LQ +R
Sbjct: 423 QAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQRKDQDILNVISLVKTTKCQLQKVR 482
Query: 362 DNGWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREISNMHYFRVELFFAVLDLQ 421
D+GWD+ ++E SSF K++ + M + F+ R R+K+ I+N+H+++V+ F+ VLD+Q
Sbjct: 483 DDGWDAFMAEVSSFSEKNNTAMLKMEEEFVDSRRPRKKSG-ITNLHHYKVDCFYTVLDMQ 541
Query: 422 LQELNN 427
LQE N+
Sbjct: 542 LQEFND 547
Score = 58 (25.5 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 19 DLELSELPSDPRQRPPISSYNPN 41
D+ ++LPSDP +R I SY+ N
Sbjct: 14 DINFNKLPSDPAKRKSILSYHLN 36
>TAIR|locus:2036700 [details] [associations]
symbol:AT1G42710 "AT1G42710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
InterPro:IPR025398 Pfam:PF14291 EMBL:AC035249 IPI:IPI00544217
RefSeq:NP_174994.1 UniGene:At.52002 ProteinModelPortal:Q9C842
EnsemblPlants:AT1G42710.1 GeneID:840883 KEGG:ath:AT1G42710
TAIR:At1g42710 PhylomeDB:Q9C842 Genevestigator:Q9C842
Uniprot:Q9C842
Length = 206
Score = 161 (61.7 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 42 HVGGPNSAHNKAVGYCEDLMKQEQHV------------RTF---FNKHSDQDRLLLEQGL 86
HVG PNS+HN A+ C +LM Q Q + R + N D R LL QG+
Sbjct: 29 HVGKPNSSHNYAIEKCVNLMNQGQSIVHALFKQDDVMKREYHIPLNTSIDASRYLLRQGI 88
Query: 87 AFRGHDESDNSSNQGNYLRILRFLADHNEDIKKVTL 122
AF GHDES+ S+N+GN+L ++++ + N+ +++ +
Sbjct: 89 AFHGHDESEESANKGNFLELVKYTGEQNDATEQMAV 124
Score = 156 (60.0 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 167 ESRDASMKEQMSVVLRYVDKNEFVIERFIGLKHVTSTTAISLKEALDQLFSKHGLSISRL 226
E DA+ EQM+VV R+VDK+ V ERFI + HV T++ S+K A+D LF+K+GLS+ +
Sbjct: 114 EQNDAT--EQMAVVFRFVDKSGTVKERFIEVVHVKETSSASVKSAIDDLFAKYGLSLKTV 171
Query: 227 RGQ 229
RGQ
Sbjct: 172 RGQ 174
>UNIPROTKB|Q5SW02 [details] [associations]
symbol:ZMYM1 "Zinc finger MYM-type protein 1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 InterPro:IPR011017 SMART:SM00746 EMBL:AL607089
UniGene:Hs.471243 HGNC:HGNC:26253 HOGENOM:HOG000132949
HOVERGEN:HBG076163 InterPro:IPR006580 SMART:SM00597 IPI:IPI00470588
SMR:Q5SW02 STRING:Q5SW02 Ensembl:ENST00000373329 Uniprot:Q5SW02
Length = 1067
Score = 174 (66.3 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 45/152 (29%), Positives = 78/152 (51%)
Query: 83 EQGLAFRGHDESDNSSNQGNYLRILRFLA-DHNEDIKKVTLKNAPGNNMLTAPSIQKDIV 141
+Q L RG+D+S +S N+GN+L +L A D E+ + L N+ + + IQ DI+
Sbjct: 491 KQCLPLRGNDQSVSSVNKGNFLELLEMRAKDKGEETFR--LMNSQVD-FYNSTQIQSDII 547
Query: 142 RACSIETTNAIFRDVGDA-LFYVLIDESRDASMKEQMSVVLRYVDKNEFVI---ERFIGL 197
E I ++ D+ F ++ DE+ +++MKEQ+S+ +RY K+ I ERF+G
Sbjct: 548 EIIKTEMLQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGF 607
Query: 198 KHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
T L + + G+ + ++ GQ
Sbjct: 608 VDTEEMTGTHLHRTIKTYLQQIGVDMDKIHGQ 639
Score = 136 (52.9 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 258 KRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNSSEQRFQANNLIEFMQSFDFVL 317
K + W H TLL +I P II LE++A SN+S + ++L+ + F+FV
Sbjct: 727 KHISQSCWTVHDRTLLSVIDSLPEIIETLEVIASHSSNTSFAD-ELSHLLTLVSKFEFVF 785
Query: 318 SLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQMMRDNG-----WDSLLSEA 372
L + +L+++ LS+ LQ K DI + +E + L R++ WD
Sbjct: 786 CLKFLYRVLSVTGILSKELQNKTIDIFSLSSKIEAILECLSSERNDVYFKTIWDGTEEIC 845
Query: 373 SSF-CLKHDIDVPNMN-----DVFLPWGRSRRKAREISNMHYFRVELFFAVLDLQLQEL 425
C ++ P++ + G S S +++ +++ LD LQ L
Sbjct: 846 QKITCKGFKVEKPSLQKRRKIQKSVDLGNSDNMFFPTSTEEQYKINIYYQGLDTILQNL 904
>UNIPROTKB|Q5SVZ6 [details] [associations]
symbol:ZMYM1 "Zinc finger MYM-type protein 1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR008906 InterPro:IPR010507
InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467 GO:GO:0005634
GO:GO:0046872 EMBL:CH471059 GO:GO:0008270 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 InterPro:IPR011017
SMART:SM00746 EMBL:BX537537 EMBL:AL607089 IPI:IPI00643628
RefSeq:NP_079048.3 UniGene:Hs.471243 ProteinModelPortal:Q5SVZ6
SMR:Q5SVZ6 IntAct:Q5SVZ6 STRING:Q5SVZ6 PhosphoSite:Q5SVZ6
DMDM:74743897 PaxDb:Q5SVZ6 PRIDE:Q5SVZ6 Ensembl:ENST00000359858
Ensembl:ENST00000373330 GeneID:79830 KEGG:hsa:79830 UCSC:uc001bym.3
CTD:79830 GeneCards:GC01P035526 H-InvDB:HIX0000408 HGNC:HGNC:26253
neXtProt:NX_Q5SVZ6 PharmGKB:PA134948969 eggNOG:NOG67438
HOGENOM:HOG000132949 HOVERGEN:HBG076163 InParanoid:Q5SVZ6
OMA:MEPERLN OrthoDB:EOG4RV2QK GenomeRNAi:79830 NextBio:69469
ArrayExpress:Q5SVZ6 Bgee:Q5SVZ6 CleanEx:HS_ZMYM1
Genevestigator:Q5SVZ6 GermOnline:ENSG00000197056 InterPro:IPR006580
SMART:SM00597 Uniprot:Q5SVZ6
Length = 1142
Score = 174 (66.3 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 45/152 (29%), Positives = 78/152 (51%)
Query: 83 EQGLAFRGHDESDNSSNQGNYLRILRFLA-DHNEDIKKVTLKNAPGNNMLTAPSIQKDIV 141
+Q L RG+D+S +S N+GN+L +L A D E+ + L N+ + + IQ DI+
Sbjct: 566 KQCLPLRGNDQSVSSVNKGNFLELLEMRAKDKGEETFR--LMNSQVD-FYNSTQIQSDII 622
Query: 142 RACSIETTNAIFRDVGDA-LFYVLIDESRDASMKEQMSVVLRYVDKNEFVI---ERFIGL 197
E I ++ D+ F ++ DE+ +++MKEQ+S+ +RY K+ I ERF+G
Sbjct: 623 EIIKTEMLQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGF 682
Query: 198 KHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
T L + + G+ + ++ GQ
Sbjct: 683 VDTEEMTGTHLHRTIKTYLQQIGVDMDKIHGQ 714
Score = 136 (52.9 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 258 KRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNSSEQRFQANNLIEFMQSFDFVL 317
K + W H TLL +I P II LE++A SN+S + ++L+ + F+FV
Sbjct: 802 KHISQSCWTVHDRTLLSVIDSLPEIIETLEVIASHSSNTSFAD-ELSHLLTLVSKFEFVF 860
Query: 318 SLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQMMRDNG-----WDSLLSEA 372
L + +L+++ LS+ LQ K DI + +E + L R++ WD
Sbjct: 861 CLKFLYRVLSVTGILSKELQNKTIDIFSLSSKIEAILECLSSERNDVYFKTIWDGTEEIC 920
Query: 373 SSF-CLKHDIDVPNMN-----DVFLPWGRSRRKAREISNMHYFRVELFFAVLDLQLQEL 425
C ++ P++ + G S S +++ +++ LD LQ L
Sbjct: 921 QKITCKGFKVEKPSLQKRRKIQKSVDLGNSDNMFFPTSTEEQYKINIYYQGLDTILQNL 979
>UNIPROTKB|E1BC73 [details] [associations]
symbol:ZMYM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR008906 InterPro:IPR010507
InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467 GO:GO:0008270
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291
GeneTree:ENSGT00550000074408 InterPro:IPR011017 SMART:SM00746
OMA:MEPERLN EMBL:DAAA02009211 IPI:IPI00688021
Ensembl:ENSBTAT00000061426 ArrayExpress:E1BC73 Uniprot:E1BC73
Length = 1130
Score = 176 (67.0 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 47/152 (30%), Positives = 78/152 (51%)
Query: 83 EQGLAFRGHDESDNSSNQGNYLRILRFLA-DHNEDIKKVTLKNAPGNNMLTAPSIQKDIV 141
+Q L +G+D+S +S N+GN+L +L A D E+I + L N+ + + IQ DI+
Sbjct: 556 KQCLFLKGNDQSISSVNKGNFLELLEIRAKDKGEEIFR--LMNSQVD-FYNSTQIQNDII 612
Query: 142 RACSIETTNAIFRDVG-DALFYVLIDESRDASMKEQMSVVLRYVDKNEFVI---ERFIGL 197
E I ++ + F V+ DE+ D + K Q SV +RY K + ERF+G
Sbjct: 613 EIIKTEILQDIVNEINVSSAFSVICDETTDGATKGQFSVCVRYPQKTSKAVLIKERFLGF 672
Query: 198 KHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
V T SL ++ + G+ ++++RGQ
Sbjct: 673 IDVEEMTGTSLHRSIKAYLQQIGVDLNKIRGQ 704
Score = 125 (49.1 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 48/182 (26%), Positives = 82/182 (45%)
Query: 258 KRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNSSEQRFQANNLIEFMQSFDFVL 317
K W H TLL +I P II LE+++ SN+S + ++L+ + F+F+
Sbjct: 790 KHISQPCWTVHDNTLLSVIEGLPEIIETLEVLSNHSSNTSLAD-ELSDLLAVVSKFEFIF 848
Query: 318 SLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQMMR-DNGWDSLLSEASSFC 376
L + IL+++ LS+ Q + DI + +E + L R D + ++ A C
Sbjct: 849 CLKFLYRILSVTGILSKEFQSETIDIFSLSSKIEAILECLSSERNDTYFKTIWDGAEEIC 908
Query: 377 LKHDIDVPNMNDVFLPWGRSRRKAREI-----SNMHYF--------RVELFFAVLDLQLQ 423
K I +V P + RRK ++I S+ +F +V +++ LD LQ
Sbjct: 909 QK--ITCKGF-EVERPSFQKRRKIQKIIDPGNSDSMFFPTSTEEQYKVNIYYQGLDTVLQ 965
Query: 424 EL 425
L
Sbjct: 966 NL 967
>UNIPROTKB|E2R5I7 [details] [associations]
symbol:ZMYM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 GeneTree:ENSGT00550000074408 InterPro:IPR011017
SMART:SM00746 OMA:MEPERLN InterPro:IPR006580 SMART:SM00597
EMBL:AAEX03009659 Ensembl:ENSCAFT00000005789 Uniprot:E2R5I7
Length = 1073
Score = 166 (63.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 44/152 (28%), Positives = 78/152 (51%)
Query: 83 EQGLAFRGHDESDNSSNQGNYLRILRFLA-DHNEDIKKVTLKNAPGNNMLTAPSIQKDIV 141
+Q L RG+D+S +S N+GN+L +L A D E+I + L N+ + + IQ DI+
Sbjct: 498 KQCLPLRGNDQSISSMNKGNFLELLEIRAKDKGEEIFR--LMNSQVD-FYNSTQIQNDII 554
Query: 142 RACSIETTNAIFRDVG-DALFYVLIDESRDASMKEQMSVVLRYVDKNEFVI---ERFIGL 197
E I ++ + F ++ DE+ D++ KEQ+++ +RY K I ERF+G
Sbjct: 555 EIIKTEMLQDIVDEINVSSAFSIICDETTDSATKEQLAIYVRYPQKMSKAILIKERFLGF 614
Query: 198 KHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
V + L + + G+ ++++ GQ
Sbjct: 615 IDVKEMSGTKLHRTIKTYLQQIGVDLNKICGQ 646
Score = 130 (50.8 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 42/179 (23%), Positives = 79/179 (44%)
Query: 258 KRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNSSEQRFQANNLIEFMQSFDFVL 317
K + W H LL +I P II LE+V+ SN+S + NNL+ + F+F+
Sbjct: 734 KHISQSCWTVHDHILLSVIEGLPEIIETLEVVSSHSSNTSLAD-ELNNLLILVSKFEFIF 792
Query: 318 SLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQMMRDNGW-DSLLSEASSFC 376
L + +L+++ LS+ LQ + DI + +E + L R++ + ++ A C
Sbjct: 793 CLKFLYRVLSVTGILSKELQSETIDIFSLSSKIEAILECLSSERNDAYFKTIWDGAEEIC 852
Query: 377 LK-----HDIDVPNMN-----DVFLPWGRSRRKAREISNMHYFRVELFFAVLDLQLQEL 425
K +++ P+ + +G S S +++ +++ LD L L
Sbjct: 853 QKITSKGFEVERPSFQKRRKIQKTIDFGNSDSMFFPTSTEEQYKINIYYQGLDTILDNL 911
>TAIR|locus:5019474775 [details] [associations]
symbol:AT3G31402 "AT3G31402" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 IPI:IPI00938621
RefSeq:NP_001154657.1 UniGene:At.74659 ProteinModelPortal:F4J921
EnsemblPlants:AT3G31402.1 GeneID:7922520 KEGG:ath:AT3G31402
OMA:EAMESKE Uniprot:F4J921
Length = 393
Score = 188 (71.2 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 37/79 (46%), Positives = 56/79 (70%)
Query: 151 AIFRDVGDALFYVLIDESRDASMKEQMSVVLRYVDKNEFVIERFIGLKHVTSTTAISLKE 210
++ ++ +F +L+DES D S KEQM++V R+ DK+ V ERF+ + HV T+AISLK
Sbjct: 89 SVIEEIDHNVFGLLVDESADVSDKEQMTLVFRFFDKSGIVKERFLSIIHVKETSAISLKS 148
Query: 211 ALDQLFSKHGLSISRLRGQ 229
A+D LF+K+ L+I + RGQ
Sbjct: 149 AIDDLFAKYRLNIKKGRGQ 167
Score = 74 (31.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 40 PNHVGGPNSAHNKAVGYCEDLMKQEQHVRTFFNKHSDQDR 79
P HVGG +S HN V CE+L KQ R + + ++
Sbjct: 29 PEHVGGVDSFHNNVVMKCENLTKQGLAFRGHYKSENSANK 68
>RGD|1307027 [details] [associations]
symbol:Zmym1 "zinc finger, MYM-type 1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
RGD:1307027 GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098
EMBL:CH473968 InterPro:IPR025398 Pfam:PF14291
GeneTree:ENSGT00550000074408 CTD:79830 RefSeq:NP_001101453.1
UniGene:Rn.19963 Ensembl:ENSRNOT00000064015 GeneID:313604
KEGG:rno:313604 NextBio:666535 Uniprot:G3V9X1
Length = 995
Score = 130 (50.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 34/151 (22%), Positives = 72/151 (47%)
Query: 83 EQGLAFRGHDESDNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDIVR 142
+Q L +G+D+S +S N+GN+L +L A ++ ++ + + ++ +Q++I+
Sbjct: 420 KQCLLLKGNDQSISSINKGNFLELLEIRARDKGEVSRLMSSHI---DFYSSTLVQEEIIE 476
Query: 143 ACSIETTNAIFRDVG-DALFYVLIDESRDASMKEQMSVVLRYVDKNE---FVIERFIGLK 198
E I ++ + F ++ +E + + Q+SV +RY K FV ERF+G
Sbjct: 477 IIKGEMLQDIVSEINASSAFSIICEEVAGSGAERQLSVCVRYAQKLPSAVFVKERFLGFV 536
Query: 199 HVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
T + + + G+ +++ GQ
Sbjct: 537 TAEEVTGAHVHRRIKAYLQQVGVDFNKICGQ 567
Score = 101 (40.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 31/134 (23%), Positives = 59/134 (44%)
Query: 258 KRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNSSEQRFQANNLIEFMQSFDFVL 317
K + W +H LL + P I+ +LE V++ S + + +L+ + F+F+
Sbjct: 655 KHASQSCWPAHDHLLLAVTDCLPEIVGMLESVSRHSSGTGVAA-ELEDLLAMVTKFEFIF 713
Query: 318 SLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQMMRDNG-----WDSLLSEA 372
L + IL+++ LS+ Q + DI + +E + L R++ WD +
Sbjct: 714 CLKFLYRILSITGILSREFQSETVDIFSLFSKIEAILECLSSERNDTYFKTIWDGADEIS 773
Query: 373 SSFCLK-HDIDVPN 385
K DI+ P+
Sbjct: 774 KKITSKGFDIEKPS 787
>UNIPROTKB|E2RFZ3 [details] [associations]
symbol:PRKRIR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 GO:GO:0005634 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 CTD:5612
OMA:TNVRWNN GeneTree:ENSGT00530000063516 EMBL:AAEX03012795
EMBL:AAEX03012794 RefSeq:XP_542300.2 Ensembl:ENSCAFT00000008506
GeneID:485182 KEGG:cfa:485182 Uniprot:E2RFZ3
Length = 762
Score = 126 (49.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 52/229 (22%), Positives = 98/229 (42%)
Query: 8 DESGPEKRNKFDLELSELPSDPRQRPPISSYNPNHVGGPNSAHNKAVGYCEDLMK---QE 64
DE K+ K D E SE Q P N ++ P SA ED++ +E
Sbjct: 109 DEIRTLKQKKID-ETSE------QEPKHKEINNSNAQNP-SAEEGGEEQDEDILPLTLEE 160
Query: 65 QHVRTFFNKHSDQDRLLLEQGLAFRGH--DE-SDNSSNQGNYLRILRFLADHNEDIKKVT 121
+ + + + L+ +Q + GH DE + N+ +L + E++ +
Sbjct: 161 KENKEYLKSLFEILILMGKQNIPLDGHETDEIPEGLFTPDNFQALLECRINSGEEVLRKR 220
Query: 122 LKNAPGNNMLTAPSIQKDIVRACSIETTNAIFRDVGDALFYVLI-DESRDASMKEQMSVV 180
+ N + + + QK ++ C R+V D+ F+ +I D+ D + +E + V+
Sbjct: 221 FETTAVNTLFCSKTQQKQMLEICESCIREETLREVRDSHFFSIITDDVVDIAGEEHLPVL 280
Query: 181 LRYVDKNEFVIERFIGLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
+R+VD++ + E F+G + I + + K GL++ RGQ
Sbjct: 281 VRFVDESHNLREEFLGFLPYEADAEILAVKFHTTITEKWGLNMEYCRGQ 329
Score = 88 (36.0 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 42/202 (20%), Positives = 89/202 (44%)
Query: 240 LENDDLPSGQGQNQEIT---LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
LE D++ S QN E LK +QW + ++ L ++ L+ + D +N
Sbjct: 400 LELDNVISVLFQNNEEKGKELKEICHSQWTGRHDAFEILVDLLQALVLCLDGINSD-TNI 458
Query: 297 SEQRFQANN---LIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEIC 353
+ A L + FDF++++ +++++L+ + + LQ + D+ A +
Sbjct: 459 RWNNYIAGRAFVLCSAVTDFDFIVTIVVLKNVLSFTRAFGKNLQGQTSDVFFAASSLTAV 518
Query: 354 KKNLQMMRDN---GWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAR-----EISN 405
+L + +N + EA++ K DI + LP G+ RR + ++++
Sbjct: 519 LHSLNEVMENIEVYHEFWFEEATNLATKLDIQMK------LP-GKFRRAQQGNLESQLTS 571
Query: 406 MHYFRVELFFAVLDLQLQELNN 427
Y++ L ++ +QEL +
Sbjct: 572 ESYYKETLSVPTVEHIIQELKD 593
>UNIPROTKB|O43422 [details] [associations]
symbol:PRKRIR "52 kDa repressor of the inhibitor of the
protein kinase" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006950 "response to
stress" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 GO:GO:0005634 GO:GO:0007165
GO:GO:0008285 GO:GO:0006950 GO:GO:0046872 GO:GO:0003677
EMBL:CH471076 SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291
EMBL:AF007393 EMBL:AF081567 EMBL:AK291843 EMBL:BC021992
EMBL:BC117138 EMBL:BC117140 EMBL:AL049970 IPI:IPI00012438
IPI:IPI00219175 RefSeq:NP_004696.2 UniGene:Hs.503315
ProteinModelPortal:O43422 SMR:O43422 IntAct:O43422 STRING:O43422
PhosphoSite:O43422 PaxDb:O43422 PRIDE:O43422 DNASU:5612
Ensembl:ENST00000260045 GeneID:5612 KEGG:hsa:5612 UCSC:uc001oxh.1
CTD:5612 GeneCards:GC11M076061 HGNC:HGNC:9440 HPA:HPA008758
MIM:607374 neXtProt:NX_O43422 PharmGKB:PA33781 eggNOG:NOG145047
HOGENOM:HOG000013127 HOVERGEN:HBG007908 InParanoid:O43422
OMA:TNVRWNN OrthoDB:EOG4TMR1D PhylomeDB:O43422 GenomeRNAi:5612
NextBio:21814 ArrayExpress:O43422 Bgee:O43422 CleanEx:HS_PRKRIR
Genevestigator:O43422 GermOnline:ENSG00000137492 Uniprot:O43422
Length = 761
Score = 125 (49.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 41/196 (20%), Positives = 87/196 (44%)
Query: 41 NHVGGPNSAHNKAVGYCEDLMK---QEQHVRTFFNKHSDQDRLLLEQGLAFRGH--DE-S 94
N+ N + + G ED++ +E+ + + + L+ +Q + GH DE
Sbjct: 133 NNSNAQNPSEEEGEGQDEDILPLTLEEKENKEYLKSLFEILILMGKQNIPLDGHEADEIP 192
Query: 95 DNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDIVRACSIETTNAIFR 154
+ N+ +L + E++ + + N + + + Q+ ++ C R
Sbjct: 193 EGLFTPDNFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQRQMLEICESCIREETLR 252
Query: 155 DVGDALFYVLI-DESRDASMKEQMSVVLRYVDKNEFVIERFIGLKHVTSTTAISLKEALD 213
+V D+ F+ +I D+ D + +E + V++R+VD++ + E FIG + I +
Sbjct: 253 EVRDSHFFSIITDDVVDIAGEEHLPVLVRFVDESHNLREEFIGFLPYEADAEILAVKFHT 312
Query: 214 QLFSKHGLSISRLRGQ 229
+ K GL++ RGQ
Sbjct: 313 MITEKWGLNMEYCRGQ 328
Score = 82 (33.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 41/202 (20%), Positives = 89/202 (44%)
Query: 240 LENDDLPSGQGQNQEIT---LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
LE D++ S QN + LK +QW + ++ L ++ L+ + D +N
Sbjct: 399 LELDNVISVLFQNSKERGKELKEICHSQWTGRHDAFEILVELLQALVLCLDGINSD-TNI 457
Query: 297 SEQRFQANN---LIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEIC 353
+ A L + FDF++++ +++++L+ + + LQ + D+ A +
Sbjct: 458 RWNNYIAGRAFVLCSAVSDFDFIVTIVVLKNVLSFTRAFGKNLQGQTSDVFFAAGSLTAV 517
Query: 354 KKNLQMMRDN---GWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAR-----EISN 405
+L + +N + EA++ K DI + LP G+ RR + ++++
Sbjct: 518 LHSLNEVMENIEVYHEFWFEEATNLATKLDIQMK------LP-GKFRRAHQGNLESQLTS 570
Query: 406 MHYFRVELFFAVLDLQLQELNN 427
Y++ L ++ +QEL +
Sbjct: 571 ESYYKETLSVPTVEHIIQELKD 592
>TAIR|locus:5019474771 [details] [associations]
symbol:AT3G30235 "AT3G30235" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 InterPro:IPR025398 Pfam:PF14291
IPI:IPI00938874 RefSeq:NP_001154654.1 UniGene:At.74661
ProteinModelPortal:F4J5F9 SMR:F4J5F9 EnsemblPlants:AT3G30235.1
GeneID:7922539 KEGG:ath:AT3G30235 Uniprot:F4J5F9
Length = 168
Score = 134 (52.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 355 KNLQMMRDNGWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREISNMHYFRVELF 414
+ LQ R +GW+SL+ + SSFC KHDI+ NM++ F+ R +RK I+NMH++++ F
Sbjct: 66 RKLQEFRVDGWNSLMIKISSFCEKHDIEKLNMDEDFVD-SRKQRKKTGITNMHHYKIYSF 124
>UNIPROTKB|E1C7U9 [details] [associations]
symbol:PRKRIR "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR006612
InterPro:IPR008906 InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699
PROSITE:PS50950 SMART:SM00692 SMART:SM00980 GO:GO:0005634
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291
CTD:5612 GeneTree:ENSGT00530000063516 EMBL:AADN02059359
EMBL:AADN02059360 IPI:IPI00679733 RefSeq:XP_425679.2
UniGene:Gga.56114 Ensembl:ENSGALT00000001229 GeneID:428122
KEGG:gga:428122 OMA:TRAFGRN NextBio:20829190 Uniprot:E1C7U9
Length = 767
Score = 104 (41.7 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 34/154 (22%), Positives = 69/154 (44%)
Query: 80 LLLEQGLAFRGH--DE-SDNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSI 136
L+ +Q + H DE + N+ +L + + +++ + + N + +
Sbjct: 176 LMGKQNIPLDSHNADELPEGIFTSDNFQALLEYRINAGDEVLRKRFEMTAVNLEYCSKTQ 235
Query: 137 QKDIVRACSIETTNAIFRDVGDALFYVLI-DESRDASMKEQMSVVLRYVDKNEFVIERFI 195
QK ++ C R+V D+ F+ ++ DE D + +E + V++R+VD + + E FI
Sbjct: 236 QKQMLEICESCIREETLREVRDSHFFSIVTDEVVDIAGEEHLPVLVRFVDDSHNLREEFI 295
Query: 196 GLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
G + I + + K GL++ RGQ
Sbjct: 296 GFLPYEADPEILAVKFHTTITEKWGLNMEYCRGQ 329
Score = 104 (41.7 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 45/202 (22%), Positives = 90/202 (44%)
Query: 240 LENDDLPSGQGQNQEIT---LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
+E D+ S QN E LK +QW + T ++ L ++ L+ V+ D S
Sbjct: 400 VELDNTISALFQNNEEKGNELKEICRSQWTGRHDTFEVLVDLMQALVLCLDAVSND-STV 458
Query: 297 SEQRFQANN---LIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEIC 353
F A L + FDF++++ +++++L+ + + LQ + DI A +
Sbjct: 459 RWNNFIAGRAFVLSSALTDFDFIVTIVILKNVLSFTRAFGKNLQGQTSDIFFAASSLTAV 518
Query: 354 KKNLQMMRDN---GWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAR-----EISN 405
+L + +N + EA++ K D+ + LP G+ RR + E+++
Sbjct: 519 LHSLNEVMENIEVYHEFWFEEATNLAAKLDVQIK------LP-GKFRRSQQGNLDAELTS 571
Query: 406 MHYFRVELFFAVLDLQLQELNN 427
+Y++ L ++ +QEL +
Sbjct: 572 ENYYKEILSVPTVEHIIQELKD 593
Score = 40 (19.1 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 41 NHVGGPNSAHNKAVG-YCED---LMKQEQHVRTFFNKHSDQD 78
+H+ P+S H K + ED +KQ++ F + + Q+
Sbjct: 90 SHLNNPHSRHRKRIKELSEDEIRTLKQQKINEAFEREQATQE 131
>UNIPROTKB|F1SUL6 [details] [associations]
symbol:PRKRIR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 GO:GO:0005634 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 OMA:TNVRWNN
GeneTree:ENSGT00530000063516 EMBL:CU928935 EMBL:CU942407
Ensembl:ENSSSCT00000016218 Uniprot:F1SUL6
Length = 762
Score = 124 (48.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 46/226 (20%), Positives = 95/226 (42%)
Query: 8 DESGPEKRNKFDLELSELPSDPRQRPPISSYNPNHVGGPNSAHNKAVGYCEDLMKQEQHV 67
DE K+ K D E SE ++ ++ NP G + + + ++++
Sbjct: 109 DEIRTLKQKKID-ETSEQEQKHKEINNSNAQNPGAEEGGEEQDEDVLPLTLEEKENKEYL 167
Query: 68 RTFFNKHSDQDRLLLEQGLAFRGHDESDNSSN---QGNYLRILRFLADHNEDIKKVTLKN 124
++ F L+ +Q + GH+ D N+ +L + E++ + +
Sbjct: 168 KSLFEILI----LMGKQNIPLDGHEADDIPEGLFTPDNFQALLECRINAGEEVLRKRFET 223
Query: 125 APGNNMLTAPSIQKDIVRACSIETTNAIFRDVGDALFYVLI-DESRDASMKEQMSVVLRY 183
N + + + QK ++ C R+V D+ F+ +I D+ D + +E + V++R+
Sbjct: 224 TAVNTLFCSKTQQKQMLEICESCVREETLREVRDSHFFSIITDDVVDIAGEEHLPVLVRF 283
Query: 184 VDKNEFVIERFIGLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
VD+ + E F+G + I + + K GL++ RGQ
Sbjct: 284 VDEAHNLREEFVGFLPYEADAEILAVKFHTTITEKWGLNMEYCRGQ 329
Score = 81 (33.6 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 41/201 (20%), Positives = 86/201 (42%)
Query: 240 LENDDLPSGQGQNQEIT---LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
LE D + S QN E LK +QW + ++ L ++ L+ + D +
Sbjct: 400 LELDSVISVLFQNNEERGKELKEICHSQWTGRHDAFEILVDLLQALVLCLDGINSDTNIR 459
Query: 297 SEQRF--QANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEICK 354
+A L + FDF++++ +++++L+ + + LQ + D+ A +
Sbjct: 460 WNNCIAGRAFVLCSAVTDFDFIVTIVVLKNVLSFTRAFGKNLQGQTSDVFFAASSLTAVL 519
Query: 355 KNLQMMRDN---GWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAR-----EISNM 406
+L + +N + EA++ K DI + LP G+ RR ++++
Sbjct: 520 HSLNEVMENIEVYHEFWFEEATNLATKLDIQMK------LP-GKFRRAQHSNLDSQLTSE 572
Query: 407 HYFRVELFFAVLDLQLQELNN 427
Y++ L ++ +QEL +
Sbjct: 573 SYYKETLSVPTVEHIIQELKD 593
>UNIPROTKB|E1BL80 [details] [associations]
symbol:PRKRIR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 GO:GO:0005634 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 OMA:TNVRWNN
GeneTree:ENSGT00530000063516 EMBL:DAAA02041098 IPI:IPI00722867
UniGene:Bt.61650 Ensembl:ENSBTAT00000044810 NextBio:20868765
Uniprot:E1BL80
Length = 762
Score = 124 (48.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 52/229 (22%), Positives = 97/229 (42%)
Query: 8 DESGPEKRNKFDLELSELPSDPRQRPPISSYNPNHVGGPNSAHNKAVGYCEDLMK---QE 64
DE K+ K D E SE Q P N ++ P SA ED++ +E
Sbjct: 109 DEIRTLKQKKID-ETSE------QEPKHKEINNSNAQNP-SAEEVGEEQDEDILPLTLEE 160
Query: 65 QHVRTFFNKHSDQDRLLLEQGLAFRGH--DE-SDNSSNQGNYLRILRFLADHNEDIKKVT 121
+ + + + L+ +Q + GH DE + N+ +L + E++ +
Sbjct: 161 KENKEYLKSLFEILILMGKQNIPLDGHETDEIPEGLFTPDNFQALLECRINSGEEVLRKR 220
Query: 122 LKNAPGNNMLTAPSIQKDIVRACSIETTNAIFRDVGDALFYVLI-DESRDASMKEQMSVV 180
+ N + + + QK ++ C R+V D+ F+ +I D+ D + +E + V+
Sbjct: 221 FETTAVNTLFCSKTQQKQMLEICESCIREETLREVRDSHFFSIITDDVVDIAGEEHLPVL 280
Query: 181 LRYVDKNEFVIERFIGLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
+R+VD+ + E F+G + I + + K GL++ RGQ
Sbjct: 281 VRFVDEAHNLREEFVGFLPYEADAEILAVKFHTTITEKWGLNMEYCRGQ 329
Score = 78 (32.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/196 (18%), Positives = 86/196 (43%)
Query: 240 LENDDLPSGQGQNQEIT---LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
LE +++ S QN E LK +QW + ++ L ++ L+ + D +
Sbjct: 400 LELENVISLLFQNNEERGKELKEICHSQWTGRHDAFEILVDLLQALVLCLDGINSDTNVR 459
Query: 297 SEQRF--QANNLIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEICK 354
+A L + FDF++++ +++++L+ + + LQ + D+ A +
Sbjct: 460 WNNCIAGRAFVLCSAVTDFDFIVTIVVLKNVLSFTRAFGKNLQGQTSDVFFAASSLTAVL 519
Query: 355 KNLQMMRDN---GWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAREISNMHYFRV 411
+L + +N + EA++ K DI + + F S ++ ++++ Y++
Sbjct: 520 HSLNEVMENIEVYHEFWFEEATNLATKLDIQM-KLPGKFRRAQHSNLES-QLTSESYYKE 577
Query: 412 ELFFAVLDLQLQELNN 427
L ++ +QEL +
Sbjct: 578 TLSVPTVEHIIQELKD 593
>UNIPROTKB|B4DS64 [details] [associations]
symbol:PRKRIR "Protein-kinase, interferon-inducible double
stranded RNA dependent inhibitor, repressor of (P58 repressor),
isoform CRA_b" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05699 GO:GO:0005634 EMBL:CH471076
GO:GO:0003676 GO:GO:0016301 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 UniGene:Hs.503315 HGNC:HGNC:9440 HOVERGEN:HBG007908
EMBL:AP002360 EMBL:AK299594 IPI:IPI00981277 STRING:B4DS64
Ensembl:ENST00000529901 Uniprot:B4DS64
Length = 586
Score = 115 (45.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 83 EQGLAFRGH--DE-SDNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKD 139
+Q + GH DE + N+ +L + E++ + + N + + + Q+
Sbjct: 3 KQNIPLDGHEADEIPEGLFTPDNFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQRQ 62
Query: 140 IVRACSIETTNAIFRDVGDALFYVLI-DESRDASMKEQMSVVLRYVDKNEFVIERFIGLK 198
++ C R+V D+ F+ +I D+ D + +E + V++R+VD++ + E FIG
Sbjct: 63 MLEICESCIREETLREVRDSHFFSIITDDVVDIAGEEHLPVLVRFVDESHNLREEFIGFL 122
Query: 199 HVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
+ I + + K GL++ RGQ
Sbjct: 123 PYEADAEILAVKFHTMITEKWGLNMEYCRGQ 153
Score = 82 (33.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 41/202 (20%), Positives = 89/202 (44%)
Query: 240 LENDDLPSGQGQNQEIT---LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
LE D++ S QN + LK +QW + ++ L ++ L+ + D +N
Sbjct: 224 LELDNVISVLFQNSKERGKELKEICHSQWTGRHDAFEILVELLQALVLCLDGINSD-TNI 282
Query: 297 SEQRFQANN---LIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEIC 353
+ A L + FDF++++ +++++L+ + + LQ + D+ A +
Sbjct: 283 RWNNYIAGRAFVLCSAVSDFDFIVTIVVLKNVLSFTRAFGKNLQGQTSDVFFAAGSLTAV 342
Query: 354 KKNLQMMRDN---GWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAR-----EISN 405
+L + +N + EA++ K DI + LP G+ RR + ++++
Sbjct: 343 LHSLNEVMENIEVYHEFWFEEATNLATKLDIQMK------LP-GKFRRAHQGNLESQLTS 395
Query: 406 MHYFRVELFFAVLDLQLQELNN 427
Y++ L ++ +QEL +
Sbjct: 396 ESYYKETLSVPTVEHIIQELKD 417
>RGD|1309679 [details] [associations]
symbol:Prkrir "protein-kinase, interferon-inducible double
stranded RNA dependent inhibitor, repressor of (P58 repressor)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR006612 InterPro:IPR008906 InterPro:IPR012337
Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950 SMART:SM00692
SMART:SM00980 RGD:1309679 GO:GO:0005634 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 CTD:5612
OMA:TNVRWNN OrthoDB:EOG4TMR1D GeneTree:ENSGT00530000063516
IPI:IPI00368448 RefSeq:NP_001178559.1 UniGene:Rn.161856
Ensembl:ENSRNOT00000021228 GeneID:308845 KEGG:rno:308845
UCSC:RGD:1309679 NextBio:659641 Uniprot:D4AD80
Length = 757
Score = 110 (43.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 42/210 (20%), Positives = 88/210 (41%)
Query: 24 ELPSDPRQRPPISSYNPNHVGGPNSAHNKAVGYCEDLMKQEQHVRTFFNKHSDQDRLLLE 83
E S+ Q ++ NP+ G N+ G L +E+ + + + L+ +
Sbjct: 120 EETSEQEQETNSNAQNPSAEVG-----NQQDGNVLPLTLEEKENKEYLKSLFEILILMGK 174
Query: 84 QGLAFRGHDESDNSSN---QGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDI 140
Q + GH+ + N+ +L + E++ + + N + + + Q+ +
Sbjct: 175 QNIPLDGHEADEIPEGLFAPDNFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQRQM 234
Query: 141 VRACSIETTNAIFRDVGDALFYVLI-DESRDASMKEQMSVVLRYVDKNEFVIERFIGLKH 199
+ C R+V D+ F+ +I D+ D + +E + V++R+VD + E F+G
Sbjct: 235 LEICESCIREETLREVRDSHFFSIITDDVVDIAGEEHLPVLVRFVDDAHNLREEFVGFLP 294
Query: 200 VTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
+ I + + K GL++ RGQ
Sbjct: 295 YEADAEILAVKFHTTITEKWGLNMEYCRGQ 324
Score = 87 (35.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 42/202 (20%), Positives = 89/202 (44%)
Query: 240 LENDDLPSGQGQNQEIT---LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
LE D++ S QN E LK +QW + ++ L ++ L+ + D +N
Sbjct: 395 LELDNVISVLFQNSEERGKELKEICHSQWTGRHDAFEILVDLLQALVLCLDGINSD-TNI 453
Query: 297 SEQRFQANN---LIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEIC 353
+ A L + FDF++++ +++++L+ + + LQ + D+ A +
Sbjct: 454 RWNNYIAGRAFVLCSAVTDFDFIVTIVVLKNVLSFTRAFGKNLQGQTSDVFFAASSLTAV 513
Query: 354 KKNLQMMRDN---GWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAR-----EISN 405
+L + +N + EA++ K DI + LP G+ RR + ++++
Sbjct: 514 LHSLNEVMENIEVYHEFWFEEATNLATKLDIQMK------LP-GKFRRAQQGNLESQLTS 566
Query: 406 MHYFRVELFFAVLDLQLQELNN 427
Y++ L ++ +QEL +
Sbjct: 567 ESYYKDALSVPTVEHIIQELKD 588
>TAIR|locus:2054567 [details] [associations]
symbol:AT2G06500 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR008906 Pfam:PF05699
EMBL:CP002685 GenomeReviews:CT485783_GR InterPro:IPR025398
Pfam:PF14291 EMBL:AC006420 HOGENOM:HOG000239492
ProtClustDB:CLSN2679877 IPI:IPI00535597 PIR:A84478
RefSeq:NP_178689.1 UniGene:At.52658 ProteinModelPortal:Q9SKI5
PaxDb:Q9SKI5 PRIDE:Q9SKI5 EnsemblPlants:AT2G06500.1 GeneID:815208
KEGG:ath:AT2G06500 TAIR:At2g06500 eggNOG:NOG75238 InParanoid:Q9SKI5
OMA:WISFRIL PhylomeDB:Q9SKI5 ArrayExpress:Q9SKI5
Genevestigator:Q9SKI5 Uniprot:Q9SKI5
Length = 582
Score = 146 (56.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 56/249 (22%), Positives = 108/249 (43%)
Query: 58 EDLMKQEQHVRTFFNKHSDQDRLLLEQGLAFRGHDESDNSSNQGNYLRILRFLADHNEDI 117
+++ K++ H R + + L + LAFRG ++ GN+L + +A+ + +
Sbjct: 130 QEINKEKIHWREVLVRIIALVKTLAKNNLAFRGENKKIGEDRNGNFLSFIEMIAEFDVVM 189
Query: 118 KKVTLKNAPGN--NMLTAPSIQKDIVRACSIETTNAIFRDV-GDALFYVLIDESRDASMK 174
++ K G + +P IQ +++ + E I + + F +++D + D S K
Sbjct: 190 REHIRKIGAGEIYSHYLSPKIQNELISMLAQEIRLMIMKTIRASKYFSIILDCTPDISHK 249
Query: 175 EQMSVVLRYVDKNEFVI---ERFIGLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQEK 231
EQM++++R VD + I E F+ V T L + ++ L I +RG
Sbjct: 250 EQMTILIRCVDISSTPIKVEEFFLKFLEVNDKTGEGLFSTIQEVLIDMELEIDDVRGHGW 309
Query: 232 QLLSVVEALENDDLPSGQGQNQEITLKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAK 291
+ ++ G +TLK T+W SH ++ I P I L +A
Sbjct: 310 DIFK--------EMVKG------LTLKSLSQTRWESHLESVKAIRFQTPEIRDALLYLA- 354
Query: 292 DKSNSSEQR 300
+K++ + R
Sbjct: 355 EKTDDPKTR 363
>MGI|MGI:1920231 [details] [associations]
symbol:Prkrir "protein-kinase, interferon-inducible double
stranded RNA dependent inhibitor, repressor of (P58 repressor)"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 MGI:MGI:1920231 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 CTD:5612 eggNOG:NOG145047 HOGENOM:HOG000013127
HOVERGEN:HBG007908 OMA:TNVRWNN OrthoDB:EOG4TMR1D EMBL:BC049103
EMBL:AK013663 IPI:IPI00137952 RefSeq:NP_082686.1 UniGene:Mm.4428
ProteinModelPortal:Q9CUX1 SMR:Q9CUX1 STRING:Q9CUX1
PhosphoSite:Q9CUX1 PRIDE:Q9CUX1 Ensembl:ENSMUST00000033009
GeneID:72981 KEGG:mmu:72981 UCSC:uc009ikt.1
GeneTree:ENSGT00530000063516 InParanoid:Q9CUX1 ChiTaRS:PRKRIR
NextBio:337269 Bgee:Q9CUX1 Genevestigator:Q9CUX1
GermOnline:ENSMUSG00000030753 Uniprot:Q9CUX1
Length = 758
Score = 105 (42.0 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 32/154 (20%), Positives = 68/154 (44%)
Query: 80 LLLEQGLAFRGHDESDNSSN---QGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSI 136
L+ +Q + GH+ + N+ +L + E++ + + N + + +
Sbjct: 171 LMGKQNIPLDGHEADEVPEGLFAPDNFQALLECRINSGEEVLRKRFEATAVNTLFCSKTQ 230
Query: 137 QKDIVRACSIETTNAIFRDVGDALFYVLI-DESRDASMKEQMSVVLRYVDKNEFVIERFI 195
Q+ ++ C R+V D+ F+ +I D+ D + +E + V++R+VD + E F+
Sbjct: 231 QRHMLEICESCIREETLREVRDSHFFSIITDDVVDIAGEEHLPVLVRFVDDAHNLREEFV 290
Query: 196 GLKHVTSTTAISLKEALDQLFSKHGLSISRLRGQ 229
G + I + + K GL++ RGQ
Sbjct: 291 GFLPYEADAEILAVKFHTTITEKWGLNMEYCRGQ 324
Score = 89 (36.4 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 41/202 (20%), Positives = 87/202 (43%)
Query: 240 LENDDLPSGQGQNQEIT---LKRFGDTQWGSHYGTLLHIISLFPHIISVLEIVAKDKSNS 296
LE D + S QN E LK +QW + ++ L ++ L+ + +N
Sbjct: 395 LELDSVISVLFQNSEERAKELKEICHSQWTGRHDAFEILVDLLQALVLCLDGIINSDTNV 454
Query: 297 SEQRFQANN---LIEFMQSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEIC 353
+ A L + FDF++++ +++++L+ + + LQ + D+ A +
Sbjct: 455 RWNNYIAGRAFVLCSAVTDFDFIVTIVVLKNVLSFTRAFGKNLQGQTSDVFFAASSLTAV 514
Query: 354 KKNLQMMRDN---GWDSLLSEASSFCLKHDIDVPNMNDVFLPWGRSRRKAR-----EISN 405
+L + +N + EA++ K DI + LP G+ RR + ++++
Sbjct: 515 LHSLNEVMENIEVYHEFWFEEATNLATKLDIQMK------LP-GKFRRAQQGNLESQLTS 567
Query: 406 MHYFRVELFFAVLDLQLQELNN 427
Y++ L ++ +QEL +
Sbjct: 568 ESYYKDTLSVPTVEHIIQELKD 589
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 41 NHVGGPNSAHNKAVGYCEDLMKQEQHVRTFFNKHSDQ 77
+H+ P+S H K + ++L + E +RT K ++
Sbjct: 90 SHLNNPHSRHRKRI---KELSEDE--IRTLKQKKIEE 121
>TAIR|locus:2203289 [details] [associations]
symbol:AT1G35150 "AT1G35150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
InterPro:IPR025398 Pfam:PF14291 EMBL:AC079605 HOGENOM:HOG000239492
IPI:IPI00547857 PIR:B86472 RefSeq:NP_174748.1 UniGene:At.51946
ProteinModelPortal:Q9C6E6 EnsemblPlants:AT1G35150.1 GeneID:840402
KEGG:ath:AT1G35150 TAIR:At1g35150 eggNOG:euNOG17754
InParanoid:Q9C6E6 OMA:HENTSTA PhylomeDB:Q9C6E6
ProtClustDB:CLSN2679877 Genevestigator:Q9C6E6 Uniprot:Q9C6E6
Length = 459
Score = 107 (42.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 43/172 (25%), Positives = 84/172 (48%)
Query: 83 EQGLAFRGHDESDNSSNQGNYLRILRFLADHN----EDIKKVTLKNAPGNNMLTAPSIQK 138
+ LAFRG +E GN+L + +A+ + E I+++ + + + IQ
Sbjct: 172 KNNLAFRGKNEKVGQDRNGNFLSFIEMIAEFDVVMREHIRRIGAAEIYSHYL--SHKIQN 229
Query: 139 DIVRACSIETTNAIFRDVGDALFY-VLIDESRDASMKEQMSVVLRYVDKNEFV--IERF- 194
+++ + E I + + + + +++D + D S KEQM++++R V+ + + +E F
Sbjct: 230 ELIGILTGEIRLMIMKTIHASKYCSIILDCTPDISHKEQMTMIIRCVNISSTLTKVEEFY 289
Query: 195 ---IGLKHVTSTTAIS-LKEALDQLFSKHGLSISRLRGQEKQL--LSVVEAL 240
+ +K +S S +KEAL + L I +RGQE + + V E L
Sbjct: 290 LTFLEVKDKSSEGLFSKIKEALVDM----ELEIDDVRGQESETHGIGVFEIL 337
Score = 65 (27.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 313 FDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQMMRDNGWDSLLSEA 372
F+ + + L D+LA+ N +S+ LQ D DI + ++E+ K L M D + L+ +
Sbjct: 334 FEILFGMILWYDLLAVVNRVSKTLQSADIDI--DVAIIEL--KGLDM--DIEAEFLVKKK 387
Query: 373 SSFCLKHDID-VPNMNDVFLPWGRSRRKAREISNMHYFRVELFFAVLDLQLQ 423
+ K D V D + ++S FR+ FF ++D L+
Sbjct: 388 RTIRRKKHFDEVSEKGD----------ENMDLSPEEDFRINYFFTLIDQALK 429
>ZFIN|ZDB-GENE-060526-125 [details] [associations]
symbol:si:ch211-240b21.2 "si:ch211-240b21.2"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR008906 InterPro:IPR012337 Pfam:PF05699
ZFIN:ZDB-GENE-060526-125 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR025398 Pfam:PF14291 EMBL:BX510312 IPI:IPI00898685
Ensembl:ENSDART00000098684 GeneTree:ENSGT00660000096826
Uniprot:F1QIK1
Length = 643
Score = 128 (50.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 50/165 (30%), Positives = 83/165 (50%)
Query: 86 LAFRGHDESDNSSNQGNYLRILRFLADHNEDIKKVTLKNAPGNNMLTAPSIQKDIVRACS 145
LA RGHDES++S N G + ++ F+A + + K L NA T+ ++Q +++ C
Sbjct: 110 LALRGHDESESSDNPGIFRGLVDFVASL-DGVLKEHLDNATVFKG-TSKTVQNELLD-CM 166
Query: 146 IETTNA-IFRDVGDALFY-VLIDESRDASMKEQMSVVLRYVDKNEFVIERFIGLKHVTST 203
+ I + + F + DE+ D S + Q+ +VLRY+D V +FI L+ S+
Sbjct: 167 LSVVREHIIEEAQSSKFLSIQADETTDISTQCQLVLVLRYIDSKNNV--QFIPLR---SS 221
Query: 204 TAISLKEALDQLFSKHGLSISRLRGQEKQLLSVVEALENDDLPSG 248
TA S+ L K LS+ L G +K L + +A + + G
Sbjct: 222 TADSISTVL-----KERLSVI-LPGDQKNKL-ISQAYDGTSVMRG 259
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 311 QSFDFVLSLYLMRDILALSNELSQALQRKDQDILNAIKLVEICKKNLQ 358
Q F+F L L+ +I+ + L LQ+KD D ++ ++ ++++Q
Sbjct: 379 QDFNFFLRLF--HNIMPHVDILYAKLQKKDIDSVHIRGSIQQFQQDIQ 424
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 427 427 0.00085 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 610 (65 KB)
Total size of DFA: 251 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.42u 0.12s 39.54t Elapsed: 00:00:02
Total cpu time: 39.42u 0.12s 39.54t Elapsed: 00:00:02
Start: Fri May 10 09:38:44 2013 End: Fri May 10 09:38:46 2013