Query 044784
Match_columns 482
No_of_seqs 197 out of 1806
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 11:31:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w1o_A Cytokinin dehydrogenase 100.0 5.2E-59 1.8E-63 487.8 42.9 463 4-481 43-534 (534)
2 2exr_A Cytokinin dehydrogenase 100.0 6.5E-56 2.2E-60 461.8 43.3 461 4-482 36-522 (524)
3 3pm9_A Putative oxidoreductase 100.0 4.3E-53 1.5E-57 434.3 28.5 433 6-479 28-476 (476)
4 3rja_A Carbohydrate oxidase; p 100.0 1.8E-50 6.2E-55 415.3 34.4 427 7-481 13-471 (473)
5 3vte_A Tetrahydrocannabinolic 100.0 1.2E-50 4.1E-55 418.0 33.1 445 3-481 20-512 (518)
6 3fw9_A Reticuline oxidase; BI- 100.0 5.3E-50 1.8E-54 412.4 34.1 428 6-481 15-493 (495)
7 4bby_A Alkyldihydroxyacetoneph 100.0 1.3E-49 4.4E-54 425.0 31.6 431 17-479 193-658 (658)
8 2bvf_A 6-hydroxy-D-nicotine ox 100.0 2.4E-48 8.1E-53 400.0 36.7 427 4-481 12-456 (459)
9 3pop_A GILR oxidase; FAD bindi 100.0 7.9E-49 2.7E-53 404.7 30.3 440 3-481 7-501 (501)
10 3tsh_A Pollen allergen PHL P 4 100.0 2.4E-48 8.3E-53 404.2 33.9 430 8-481 24-495 (500)
11 1zr6_A Glucooligosaccharide ox 100.0 6.5E-46 2.2E-50 385.0 35.6 423 11-481 24-478 (503)
12 2uuu_A Alkyldihydroxyacetoneph 100.0 1.1E-46 3.7E-51 395.2 29.1 436 6-479 105-584 (584)
13 1wvf_A 4-cresol dehydrogenase 100.0 8.4E-46 2.9E-50 386.6 32.7 432 6-480 31-514 (520)
14 2y3s_A TAML; oxidoreductase; H 100.0 3E-45 1E-49 381.2 36.2 430 8-481 36-527 (530)
15 2wdx_A Putative hexose oxidase 100.0 1.3E-45 4.6E-50 383.7 32.3 203 6-220 32-258 (523)
16 2ipi_A Aclacinomycin oxidoredu 100.0 1.7E-44 5.8E-49 375.6 38.1 432 5-481 29-519 (521)
17 1e8g_A Vanillyl-alcohol oxidas 100.0 6.9E-46 2.4E-50 389.6 26.9 430 6-480 35-548 (560)
18 1f0x_A DLDH, D-lactate dehydro 100.0 8.6E-45 2.9E-49 378.0 19.6 423 6-481 23-562 (571)
19 4feh_A Oxidoreductase DPRE1; a 100.0 3E-36 1E-40 309.4 35.6 205 16-231 30-238 (481)
20 2vfr_A Xylitol oxidase, aldito 100.0 7.3E-38 2.5E-42 318.8 22.1 198 19-234 10-209 (422)
21 3js8_A Cholesterol oxidase; ch 100.0 2.1E-33 7.2E-38 287.7 29.3 187 14-212 14-221 (540)
22 2i0k_A Oxidoreductase; MIX alp 100.0 5.8E-33 2E-37 291.0 28.9 201 11-226 17-238 (561)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.2E-26 4E-31 225.2 10.7 175 7-210 36-217 (322)
24 1hsk_A UDP-N-acetylenolpyruvoy 99.9 5.6E-26 1.9E-30 222.1 10.5 156 26-208 45-209 (326)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 1E-24 3.4E-29 213.6 15.6 164 21-210 23-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 1.3E-23 4.5E-28 205.3 17.0 165 21-210 7-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 6.3E-22 2.1E-26 186.6 10.0 168 26-234 19-189 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.7E-21 9.3E-26 177.1 10.6 122 93-221 1-127 (219)
29 1ffv_C CUTM, flavoprotein of c 98.6 1.8E-07 6.3E-12 89.2 10.7 151 29-208 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.9 2.1E-05 7.3E-10 74.9 7.0 153 29-208 4-177 (288)
31 2w3s_A Xanthine dehydrogenase; 97.8 2.1E-05 7.2E-10 79.7 6.8 152 31-207 178-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 97.4 0.00023 7.8E-09 68.3 7.5 158 27-207 7-190 (305)
33 1t3q_C Quinoline 2-oxidoreduct 97.2 0.00052 1.8E-08 65.2 6.9 151 29-206 4-174 (288)
34 3hrd_C Nicotinate dehydrogenas 96.8 0.0025 8.5E-08 60.7 7.6 151 30-206 3-177 (296)
35 3unc_A Xanthine dehydrogenase/ 93.6 0.22 7.5E-06 56.9 10.1 151 28-205 231-411 (1332)
36 1rm6_B 4-hydroxybenzoyl-COA re 90.7 0.37 1.3E-05 46.1 6.4 101 29-143 5-117 (324)
37 3zyv_A AOH1; oxidoreductase, m 75.6 4.1 0.00014 46.7 7.0 101 31-145 241-362 (1335)
38 1xty_A PTH, peptidyl-tRNA hydr 60.1 11 0.00039 30.0 4.7 48 14-65 41-89 (120)
39 1rzw_A Protein AF2095(GR4); be 46.1 23 0.00079 28.3 4.4 45 18-66 39-84 (123)
40 1wn2_A Peptidyl-tRNA hydrolase 45.2 25 0.00084 28.0 4.4 44 18-65 46-90 (121)
41 1rlk_A Hypothetical protein TA 34.7 34 0.0012 27.0 3.7 43 19-65 43-86 (117)
42 2zv3_A PTH, peptidyl-tRNA hydr 32.7 34 0.0012 26.9 3.3 42 19-64 41-83 (115)
43 2lnd_A De novo designed protei 30.1 80 0.0027 22.7 4.5 34 32-67 30-63 (112)
44 1q7s_A BIT1, protein CGI-147; 24.1 77 0.0027 24.9 4.0 43 19-65 43-86 (117)
45 2g2c_A Putative molybdenum cof 20.1 1.3E+02 0.0044 25.1 4.9 41 31-73 47-87 (167)
No 1
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=5.2e-59 Score=487.81 Aligned_cols=463 Identities=49% Similarity=0.891 Sum_probs=361.7
Q ss_pred CCCCeecChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhcc--C-CCeEEEEcCCCCCCCCccCCCcEEEE
Q 044784 4 PTDNLRTDPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSL--F-SYTIAAKGQAHSTWGQAQANDGVVVQ 80 (482)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~--~-~~~~~~~g~g~~~~~~~~~~~~vvid 80 (482)
+.++|++|+..+..+..+|+..+...|.+|++|+|++||+++|++| ++ + ++|++++|||||+.|.+.+.+|++||
T Consensus 43 ~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a--~~~~~~~~~v~~~G~G~~~~g~~~~~~gvvi~ 120 (534)
T 1w1o_A 43 LDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAA--NSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVN 120 (534)
T ss_dssp TTTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHH--HHCTTCCCCEEEESSCCCSSSTTCCTTSEEEE
T ss_pred CCceEecCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHH--HhcCCCCceEEEECCCCCCCCCcCCCCeEEEE
Confidence 4678999999999999999987888999999999999999999999 54 6 99999999999999888777899999
Q ss_pred cCCCcCcCCCce-----EEEcCCCCCccEEEEcccccHHHHHHHHHhCCCccccCCCCCCccccccccccccCCCCCcCC
Q 044784 81 MNSLNRFRNGTG-----ILISGDRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKG 155 (482)
Q Consensus 81 l~~~~~~~~~~~-----i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G 155 (482)
|++||+ + +++|++ ..+++||||++|.+|.+++.++|+.++++++...+||||++++||.|+.+.+||
T Consensus 121 l~~m~~-----i~~~~~~~~d~~---~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG 192 (534)
T 1w1o_A 121 MASLGD-----AAAPPRINVSAD---GRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHG 192 (534)
T ss_dssp GGGGGC-----SSSSCSEEECTT---SSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHHHHC
T ss_pred Cccccc-----cccCccEEEcCC---CCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCccccccccc
Confidence 999994 6 899987 489999999999999999999999988888888899999999999999999999
Q ss_pred CccccEEEEEEEecCCeEEEecCCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHHHHHHHHHhc
Q 044784 156 PQITNVLELDVLTGKGEFVTCSPQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFSTDQETLIST 235 (482)
Q Consensus 156 ~~~d~v~~~~vv~~~G~~~~~~~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (482)
.++|+|+++|||++||+++++++.+++||||+++||+|+|||||+++||++|.|+...++.+.|.+++++.+.+..+...
T Consensus 193 ~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (534)
T 1w1o_A 193 PQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAP 272 (534)
T ss_dssp CGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHCB
T ss_pred cHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999998778888999998888888777765
Q ss_pred CCC-----CCCCCCCcccceEeecCC------CCCcCCcccchhhhccccc--cceEEEEEEEEEeCC-C---cc-hHHH
Q 044784 236 TGP-----SDKVMPDFLEGHLLMNQS------PLDFYPQSQRRKITFLVNQ--YGILYIIEVVTYYDN-K---NE-AKKV 297 (482)
Q Consensus 236 ~g~-----~~~~~~e~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~---~~-~~~~ 297 (482)
+. .+. .+|+++...+.... ....++......+..++.. +...+++++..+++. . .+ .+.+
T Consensus 273 -~~~~~~~~~~-~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ie~~~~~~g~~~~~~~~~~~~ 350 (534)
T 1w1o_A 273 -RPGGGGASFG-PMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQEL 350 (534)
T ss_dssp -C------CBC-SCSEEEEEEEEGGGHHHHHHTTSSSCHHHHHHHHHHHHHTTCSEEEEEEEEEEC-------CHHHHHH
T ss_pred -cccccccccc-chhHhhhhhhcccccccccccccccCccccccccccccccccceEEEEEEEEecCCCccchhhhHHHH
Confidence 43 343 68999887663210 0001111000111122322 456677776655532 2 11 2456
Q ss_pred HHHHhccccCCCCccccccchHHHHhhhhhHHHHHHHHccCCCCCccccccccccchhhhhhHHHHHHHhhccCCCCceE
Q 044784 298 KQMLKSLKGFLPGFVFEKDVTYLQFLNRVHDQEIELRKKGLWDIPHPWLNIFIPKSRITDFDNGVFRNILLKRNFTSSTV 377 (482)
Q Consensus 298 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~vp~~~~~~~~~~~~~~l~~~~~~~~~~i 377 (482)
+.+++.+... +...+....+|..+.+..............|..++++.++++|.+.++++++++.+.+.+. ......+
T Consensus 351 ~~~~~~l~~~-~~~~~~~~~~y~~~~~~~~~~~w~~r~~~~~~~~~~~~d~~vP~s~l~~~~~~~~~~l~~~-~~~~~~~ 428 (534)
T 1w1o_A 351 ASVLGTLSYV-EGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQG-TDIVGPL 428 (534)
T ss_dssp HHHHTTCCCC-TTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSCCCCEEEEEEGGGHHHHHHHHTTTTTTT-SCCCSCE
T ss_pred HHHHHhhccc-CCcceeccchHHHHhhhhhhhHHHHhhccccccCCccccEEecHHHHHhHHHHHHHHHhhc-cCCcccE
Confidence 6666666532 2233345677777655543322233456677776667799999999999998775545542 2222456
Q ss_pred EEEEccCCCCCcCcceeeccCCceEEEEEeeCC--CcchHHHHHHhhHHHHHHHHHcCccceecCCCCCChhhHHHhhcc
Q 044784 378 LVYPLLRSKWDERMSAVIAAEEEVFYFVGFLDA--SADNWEAFDNKNKDILQFCVNAGIKFKQYLGHHATKEEWIIHFGS 455 (482)
Q Consensus 378 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~l~~~~~~~G~~~~~y~~~~~~~~~~~~~yG~ 455 (482)
.++++.|.+++..++.+.+ ++++||++.+... .++.+++..+..+++.+.+.+.|.++..|++.++..++|+..||+
T Consensus 429 ~~~~~~gh~~~~~~s~v~~-dgn~h~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~yl~~~~~~~~w~~~~G~ 507 (534)
T 1w1o_A 429 IVYPLNKSMWDDGMSAATP-SEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGA 507 (534)
T ss_dssp EEEEEEGGGSCTTSSCCCC-SSSEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHTTCCCEESSCCCSSHHHHHHHHCH
T ss_pred EEeecccccccccccccCC-CccEEEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhCCCcEEECCCCCChHHHHHHhCH
Confidence 7778776666667788888 9999999887654 234555556778888988888887789999888788999778997
Q ss_pred -chhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 456 -KWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 456 -~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
+|++|++||++|||+|||||||.|++
T Consensus 508 ~~~~~l~~iK~~~DP~~ilnpgk~I~~ 534 (534)
T 1w1o_A 508 AKWNRFVEMKNKYDPKRLLSPGQDIFN 534 (534)
T ss_dssp HHHHHHHHHHHHHCTTCCBCGGGCSCC
T ss_pred HHHHHHHHHHHhcCchhhcCCCCcCCC
Confidence 99999999999999999999997764
No 2
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=6.5e-56 Score=461.77 Aligned_cols=461 Identities=43% Similarity=0.773 Sum_probs=352.2
Q ss_pred CCCCeecChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhcc-CCCeEEEEcCCCCCCCCccCCCcEEEEcC
Q 044784 4 PTDNLRTDPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSL-FSYTIAAKGQAHSTWGQAQANDGVVVQMN 82 (482)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~-~~~~~~~~g~g~~~~~~~~~~~~vvidl~ 82 (482)
+.++|++|+..+..+.+||+..+...|.+|++|.|++||+++|++| ++ +++|+++||||||+.|.+.+.+||+|||+
T Consensus 36 ~~~~v~~d~~~~~~~~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a--~~~~~~~v~~~GgGts~~g~~~~~~gvvidl~ 113 (524)
T 2exr_A 36 IQGEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAA--LRSDKLTVAARGNGHSINGQAMAEGGLVVDMS 113 (524)
T ss_dssp CSSEEECSHHHHHHHTCCTTCCCCCCCSEEEECSSHHHHHHHHHHH--HHSSSCCEEEESSSCCSSSTTCCTTSEEEEGG
T ss_pred CCCeEEeCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHH--HhhcCceEEEECCCcCCCCcccCCCEEEEECc
Confidence 3578999999999999999887888999999999999999999999 64 99999999999999988776689999999
Q ss_pred CCcCcCCCceEEEcC-----CCCCc--cEEEEcccccHHHHHHH-HHhCCCccccCCCCCCccccccccccccCCCCCcC
Q 044784 83 SLNRFRNGTGILISG-----DRSSG--FYADVGGEQLWIDVLNA-TLTRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQK 154 (482)
Q Consensus 83 ~~~~~~~~~~i~~~~-----~~~~~--~~~~v~aG~~~~~l~~~-l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~ 154 (482)
+||+ + +++. + . .+++||||++|.++.++ +.++|+.|+++++.+.+||||++++||+|+.+.+|
T Consensus 114 ~m~~-----i-~i~~~~~~~~---~~~~~v~v~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~y 184 (524)
T 2exr_A 114 TTAE-----N-HFEVGYLSGG---DATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRY 184 (524)
T ss_dssp GGTT-----S-CEEEEECCSS---SSSEEEEEETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHHHH
T ss_pred CCCC-----c-EEeecccCCC---CCceEEEEeCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCccccccc
Confidence 9994 5 5555 3 3 68999999999998555 55999998888888889999999999999999999
Q ss_pred CCccccEEEEEEEecCCeEEEecCCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHHHHHHHHHh
Q 044784 155 GPQITNVLELDVLTGKGEFVTCSPQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFSTDQETLIS 234 (482)
Q Consensus 155 G~~~d~v~~~~vv~~~G~~~~~~~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (482)
|.+.|+|++++||++||++++++..+++||||+++||+|+|||||+++||++|.|+...+..+.|++++++.+++..+++
T Consensus 185 G~~~d~V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~ 264 (524)
T 2exr_A 185 GPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVS 264 (524)
T ss_dssp CCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CcHhhhEEEEEEEecCCeEEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHH
Confidence 99999999999999999999999888999999999999999999999999999999888888999999999999999887
Q ss_pred cCCCCCCCCCCcccceEeecC-CCCCcC-----Ccccchhhhcccc-ccceEEEEEEEEEe-CC-Ccc--hHHHHHHHhc
Q 044784 235 TTGPSDKVMPDFLEGHLLMNQ-SPLDFY-----PQSQRRKITFLVN-QYGILYIIEVVTYY-DN-KNE--AKKVKQMLKS 303 (482)
Q Consensus 235 ~~g~~~~~~~e~l~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~-~~~--~~~~~~ll~~ 303 (482)
. +.. + ..|++|...+... ...+.. .......+..+|. .+...+++++..++ .. ..+ .+.++++++.
T Consensus 265 ~-~~~-~-~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~llve~~~~~~~g~~~~~v~~~~~~~~~~ 341 (524)
T 2exr_A 265 Q-KNE-S-SFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNSTIDKRVERLIGR 341 (524)
T ss_dssp S-CTT-S-SCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCGGGSCTTCCSEEEEEEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred c-CCc-c-hhHhhchhhhhcchhhhhhhhhcccccccccchhcCCcccccEEEEEEEEeecCCCCCHHHHHHHHHHHHHH
Confidence 6 433 2 5799998876432 111101 0000001123442 24466777776666 33 211 2234444444
Q ss_pred cccCCCCccccccchHHHHhhhhhHHHHHHHHccCCCCCccccccccccchhhhhhHHHHHHHhhccCCCCceEEEEEcc
Q 044784 304 LKGFLPGFVFEKDVTYLQFLNRVHDQEIELRKKGLWDIPHPWLNIFIPKSRITDFDNGVFRNILLKRNFTSSTVLVYPLL 383 (482)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~vp~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~ 383 (482)
+. ..+......+..+..+.+.....+...+...+|..++++.++.+|.++++++++.+.+.... ....+.+++++..
T Consensus 342 l~-~~~~~~~~~~~~~~~~~~~~~~~~W~~R~~~~~a~~~~~~Dv~VP~s~l~~~~~~v~~~~~g--dgn~h~~i~~~~~ 418 (524)
T 2exr_A 342 LR-FNEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNRTVFKELVK--NGVNGPMLVYPLL 418 (524)
T ss_dssp CC-CCTTCEEEEEEEHHHHHTTTHHHHHHHHHTTCSSSCCCCEEEEEEHHHHHHHHHHCCCCCTT--TCCSSCEEEEEEE
T ss_pred HH-hCCCeEeecccchhhhhhhhhhHHHHhhhhcccccCCCeeEEEECHHHHHHHHHHHHHHHhC--CCCcceEEEEeCC
Confidence 44 22322223334555555444333334556667877777889999999999998765322221 2223677788765
Q ss_pred CCCCCcCcceeeccC-CceEEEEEeeCCC-c----chHHHHHHhhHHHHHHHHHcCccceecCCCCCChhhHHHhhccch
Q 044784 384 RSKWDERMSAVIAAE-EEVFYFVGFLDAS-A----DNWEAFDNKNKDILQFCVNAGIKFKQYLGHHATKEEWIIHFGSKW 457 (482)
Q Consensus 384 g~~~~~~~~~~~~~~-~~~~~~i~~~~~~-~----~~~~~~~~~~~~l~~~~~~~G~~~~~y~~~~~~~~~~~~~yG~~~ 457 (482)
..++......+.+ + ..++|.+.+.... + ..++.+.+.++++.+.++..|.++..|+.++++.++|...||+.|
T Consensus 419 ~~~~~~r~~~~~~-~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~yl~~~~~~~~w~~~~G~~~ 497 (524)
T 2exr_A 419 RSRWDDRTSVVIP-EEGEIFYIVALLRFVPPCAKVSSVEKMVAQNQEIVHWCVKNGIDYKLYLPHYKSQEEWIRHFGNRW 497 (524)
T ss_dssp GGGSCTTSSCCCC-SSCSEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEESSCCCCSHHHHHHHHGGGH
T ss_pred chHHHhHHHhhCC-CCccEEEEEEEeccCCCcccchHHHHHHHHHHHHHHHHHHcCCccEEeecCCCCHHHHHHHhhhHH
Confidence 5444445666777 6 4477777764432 1 345555677888898899989889999999999999988999999
Q ss_pred hHHHHhhhcCCCCCCCCCCCcCCCC
Q 044784 458 NTFQQRKTRFDPRMILSPGQRIFNY 482 (482)
Q Consensus 458 ~~L~~iK~~~DP~nifnpgk~i~~~ 482 (482)
++|++||++|||+|||||||.|+++
T Consensus 498 ~~m~~iK~~~DP~~iLnPG~~if~~ 522 (524)
T 2exr_A 498 SRFVDRKAMFDPMAILSPGQKIFNR 522 (524)
T ss_dssp HHHHHHHHHHCTTCCBCGGGCSSCC
T ss_pred HHHHHHHhhcCchhhcCCCCccCCC
Confidence 9999999999999999999999864
No 3
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=4.3e-53 Score=434.26 Aligned_cols=433 Identities=14% Similarity=0.119 Sum_probs=313.2
Q ss_pred CCeecChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC-CCcEEEEcCCC
Q 044784 6 DNLRTDPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA-NDGVVVQMNSL 84 (482)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~-~~~vvidl~~~ 84 (482)
+.|++|+..+..|.++|+..+...|.+|++|.|++||+++|++| +++++|++++|||||+.|.+.+ .+|++|||++|
T Consensus 28 ~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a--~~~~~pv~~~GgGt~~~g~~~~~~ggvvIdl~~m 105 (476)
T 3pm9_A 28 KHALTDPLELEAYITEERNLYRGHSPLVLRPGSTEEVVAICKLA--NEARVALVPQGGNTGLVGGQTPHNGEVVISLKRM 105 (476)
T ss_dssp GGEECSHHHHHHHHBCTTCCCBCCCSCEECCCSHHHHHHHHHHH--HHHTCCEEEESSSCCSSSTTCCCSSCEEEECTTC
T ss_pred CcEecCHHHHHHHhcccccccCCCCCEEEecCCHHHHHHHHHHH--HHcCCeEEEEeCCCCCCCCccCCCCcEEEEeeCC
Confidence 56888999999999999877888999999999999999999999 7999999999999999988776 46899999999
Q ss_pred cCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCc-cccCCCCCCccccccccccccCCCCCcCCCccccEEE
Q 044784 85 NRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLS-PVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVLE 163 (482)
Q Consensus 85 ~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~-~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~ 163 (482)
| +++++|+++ .+++||||++|.+|.++|.++|+. ++.+++...+||||++++|+.|..+.+||.++|+|++
T Consensus 106 ~-----~i~~id~~~---~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~ 177 (476)
T 3pm9_A 106 D-----KIREIDTSS---NTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALG 177 (476)
T ss_dssp C-----CEEEEETTT---TEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEE
T ss_pred C-----ceEEEcCCC---CeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeE
Confidence 9 477999984 899999999999999999999998 5555566678999999999988888999999999999
Q ss_pred EEEEecCCeEEEecC-----CCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHHHHHHHHHhcCCC
Q 044784 164 LDVLTGKGEFVTCSP-----QKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFSTDQETLISTTGP 238 (482)
Q Consensus 164 ~~vv~~~G~~~~~~~-----~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 238 (482)
+++|++||++++++. ..++||+|+++|++|+|||||+++||++|.|+......+.|++++++.+.+..+.+..+.
T Consensus 178 levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~g~ 257 (476)
T 3pm9_A 178 VEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQGEAAG 257 (476)
T ss_dssp EEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHHHHGG
T ss_pred EEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999754 246899999999999999999999999999998777788999999999999888764244
Q ss_pred CCCCCCCcccceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcchHHHHHHHhccccCCCCc--ccccc
Q 044784 239 SDKVMPDFLEGHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEAKKVKQMLKSLKGFLPGF--VFEKD 316 (482)
Q Consensus 239 ~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~--~~~~~ 316 (482)
.|. ++|+||...+ .. +..+.... ..++....+.+++++.+.. ... .+.++++++.+...+... .....
T Consensus 258 ~p~-a~El~d~~~~-~~--~~~~~~~~----~~~~~~~~~~llve~~g~~-~~~-~~~~~~~~~~~~~~g~~~~~~~a~~ 327 (476)
T 3pm9_A 258 NLT-SFELIAETPL-DF--SVRHANNR----DPLEARYPWYVLIELSSPR-DDA-RAALESILERGFEDGIVVDAAIANS 327 (476)
T ss_dssp GEE-EEEEEEHHHH-HH--HHHHTTCC----CCSSSCCSEEEEEEEEESS-SCH-HHHHHHHHHHHHHTTCCCEEEECCS
T ss_pred Cce-EEEecCHHHH-HH--HHhccCCC----CCCCccCCeEEEEEEccCc-HHH-HHHHHHHHHHHHhcCCCcceEEeCC
Confidence 454 6788887643 11 00011100 0111223466666655433 111 234455555443111110 00000
Q ss_pred c-hHHH-HhhhhhHHHHHHHHccCCCCCccccccccccchhhhhhHHHHHHHhhccCCCCceEEEEEccCCCCCcCccee
Q 044784 317 V-TYLQ-FLNRVHDQEIELRKKGLWDIPHPWLNIFIPKSRITDFDNGVFRNILLKRNFTSSTVLVYPLLRSKWDERMSAV 394 (482)
Q Consensus 317 ~-~~~~-~~~~~~~~~~~~~~~~~w~~r~~~~~~~vp~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~g~~~~~~~~~~ 394 (482)
- .... |.-+-... ......+ +....++.+|.++++++++++ +.+.++.. + +..+..+
T Consensus 328 ~~~~~~lW~~R~~~~-~~~~~~g----~~~~~Dv~vP~~~l~~~~~~~-~~~~~~~~-~--------------~~~~~~~ 386 (476)
T 3pm9_A 328 VQQQQAFWKLREEIS-PAQKPEG----GSIKHDISVPVAAVPQFIEQA-NAAVVALI-P--------------GARPVPF 386 (476)
T ss_dssp HHHHHHHHHHHHTHH-HHTGGGC----CEECCEEECCGGGHHHHHHHH-HHHHHHHS-T--------------TCEEEEE
T ss_pred HHHHHHHHHHHHHHH-HHHhhcC----CceeEEEEeeHHHHHHHHHHH-HHHHHHhc-C--------------CCeEEEE
Confidence 0 0000 10010000 0011111 122468999999999999986 66665210 0 3335567
Q ss_pred ecc-CCceEEEEEeeCC-Ccch-HHHHHHhhHHHHHHHHHcCccceecCCCCCChhhH-HHhhcc-chhHHHHhhhcCCC
Q 044784 395 IAA-EEEVFYFVGFLDA-SADN-WEAFDNKNKDILQFCVNAGIKFKQYLGHHATKEEW-IIHFGS-KWNTFQQRKTRFDP 469 (482)
Q Consensus 395 ~~~-~~~~~~~i~~~~~-~~~~-~~~~~~~~~~l~~~~~~~G~~~~~y~~~~~~~~~~-~~~yG~-~~~~L~~iK~~~DP 469 (482)
+|+ |||+|+++.+... ++++ .+.+.+...++.+.+.++|+....-......+.+| ...||+ .++.|++||+.|||
T Consensus 387 gH~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGsis~EHGiG~~k~~~l~~~~~~~~~~~m~~iK~~~DP 466 (476)
T 3pm9_A 387 GHLGDGNIHYNVSQPVGADKAEFLARWHDVSQVVFEVVLRLGGSISAEHGIGVMKRDELAEVKDKTAIELMRSIKALLDP 466 (476)
T ss_dssp EEGGGTEEEEEEECCTTCCHHHHHTTHHHHHHHHHHHHHHTTCBSCSSSCCTTTTHHHHHHHSCHHHHHHHHHHHHHHCT
T ss_pred EEeCCCceEEEEecCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEcccCchhHHHHHHHhcCHHHHHHHHHHHHHhCc
Confidence 888 9999999887542 2222 34456777888888888765522222222235666 788885 89999999999999
Q ss_pred CCCCCCCCcC
Q 044784 470 RMILSPGQRI 479 (482)
Q Consensus 470 ~nifnpgk~i 479 (482)
+|||||||.+
T Consensus 467 ~~ilNPGki~ 476 (476)
T 3pm9_A 467 HGIMNPGKVV 476 (476)
T ss_dssp TSCBSTTSCC
T ss_pred ccCCCCCCcC
Confidence 9999999985
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.8e-50 Score=415.31 Aligned_cols=427 Identities=13% Similarity=0.073 Sum_probs=288.8
Q ss_pred Ceec-ChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCcc--CCCcEEEEcCC
Q 044784 7 NLRT-DPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQ--ANDGVVVQMNS 83 (482)
Q Consensus 7 ~v~~-~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~--~~~~vvidl~~ 83 (482)
.|++ +++.|......|+..+.+.|.+|++|.|++||+++|++| +++++|+++||||||+.+.+. ..++++|||++
T Consensus 13 ~v~~p~~~~y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a--~~~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~ 90 (473)
T 3rja_A 13 PIDIPGTADYERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCA--KKLNLKVSAKSGGHSYASFGFGGENGHLMVQLDR 90 (473)
T ss_dssp CBCCTTSHHHHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHH--HHTTCCEEEESSCCCTTCGGGTSSSSCEEEECTT
T ss_pred cEECCCCCchHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHH--HHcCCeEEEEcCCCCCCCCcccCCCCeEEEECCC
Confidence 3444 778899999999988899999999999999999999999 899999999999999986443 35689999999
Q ss_pred CcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCC-CccccCCCCCCccccccccccccCCCCCcCCCccccEE
Q 044784 84 LNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRG-LSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVL 162 (482)
Q Consensus 84 ~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g-~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~ 162 (482)
||+ +.++|++ ..+++||||++|.+|.++|.++| +.++. +.++.++|||++++||+|..+++||.++|+|+
T Consensus 91 ~~~-----i~~vd~~---~~~v~v~aG~~~~~l~~~l~~~G~~~~p~-G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~ 161 (473)
T 3rja_A 91 MID-----VISYNDK---TGIAHVEPGARLGHLATVLNDKYGRAISH-GTCPGVGISGHFAHGGFGFSSHMHGLAVDSVV 161 (473)
T ss_dssp CCC-----EEEEETT---TTEEEECTTCBHHHHHHHHHHHHSEECCC-CSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEE
T ss_pred CCc-----eEEEcCC---CCEEEECCCCCHHHHHHHHHHcCCEEecc-CCCCCcEeeeeccCCCCCcccccccchHhhee
Confidence 983 5559998 48999999999999999999999 66655 45678999999999999999999999999999
Q ss_pred EEEEEecCCeEEEecCCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCC--hhhH---HHHHHHHHhcCC
Q 044784 163 ELDVLTGKGEFVTCSPQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSD--FSSF---STDQETLISTTG 237 (482)
Q Consensus 163 ~~~vv~~~G~~~~~~~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~g 237 (482)
+++||++||+++++++++++||||+++|++|+|||||+++||++|.|+....+.+.|.. .+++ ++...++...
T Consensus 162 ~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (473)
T 3rja_A 162 GVTVVLADGRIVEASATENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYARW-- 239 (473)
T ss_dssp EEEEECTTSCEEEEETTBSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHHH--
T ss_pred eEEEEecCCeEEEeCCCCCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhhh--
Confidence 99999999999999998999999999999999999999999999999877666666552 2223 3333333331
Q ss_pred CCCCCCCCcccceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcchHHHHHHHhccccCCC--Cccccc
Q 044784 238 PSDKVMPDFLEGHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEAKKVKQMLKSLKGFLP--GFVFEK 315 (482)
Q Consensus 238 ~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~~~~~ 315 (482)
. .++.+.....+. + .. .+ .....|+|+ .++++++++++.+..| ......
T Consensus 240 ~----~p~~l~~~~~~~------------------~-~~-~~--~~~~~~~G~---~~~~~~~l~pl~~~~p~~~~~~~~ 290 (473)
T 3rja_A 240 V----APREVNFRIGDY------------------G-AG-NP--GIEGLYYGT---PEQWRAAFQPLLDTLPAGYVVNPT 290 (473)
T ss_dssp T----CCTTEEEEEEES------------------S-SS-CC--EEEEEEESC---HHHHHHHHHHHHTTSCTTCEECCC
T ss_pred C----CChhHEEEEEEc------------------C-CC-cE--EEEEEecCC---HHHHHHHHHHHHHhCCCCcceeee
Confidence 0 234343222211 0 01 11 223567787 5688899998887765 333345
Q ss_pred -cchHHHHhhhhhHHHHHHHHccCC-CCCccccccc---cccchhhhhhHHHHHHHhhccCC---CCceEEEEEccCCC-
Q 044784 316 -DVTYLQFLNRVHDQEIELRKKGLW-DIPHPWLNIF---IPKSRITDFDNGVFRNILLKRNF---TSSTVLVYPLLRSK- 386 (482)
Q Consensus 316 -~~~~~~~~~~~~~~~~~~~~~~~w-~~r~~~~~~~---vp~~~~~~~~~~~~~~l~~~~~~---~~~~i~~~~~~g~~- 386 (482)
.++|.+......... ........ ..+..+.+.+ ++.+.+..+.+ .+.+..+. ....+.+.++||..
T Consensus 291 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ks~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~GG~~~ 365 (473)
T 3rja_A 291 TSLNWIESVLSYSNFD-HVDFITPQPVENFYAKSLTLKSIKGDAVKNFVD----YYFDVSNKVKDRFWFYQLDVHGGKNS 365 (473)
T ss_dssp EEECHHHHHHHTSSSS-CCCCSSCCCCBEEEEEEEEESCCTTHHHHHHHH----HHHHTGGGCCSSEEEEEEEECCSTTC
T ss_pred cccCHHHHHHhhhcCC-CcccccCCCCCcceEeccccCCCCHHHHHHHHH----HHHhcCCCCCCcceEEEEEecCCcch
Confidence 678876543221000 00000000 0011112222 33344444433 33221111 12346688998831
Q ss_pred -C---CcCcceeeccCCceEEE--EEeeCCCcchHHHHHHhhHHHHHHHHHc-----CccceecCCCCCChhhH-HHhhc
Q 044784 387 -W---DERMSAVIAAEEEVFYF--VGFLDASADNWEAFDNKNKDILQFCVNA-----GIKFKQYLGHHATKEEW-IIHFG 454 (482)
Q Consensus 387 -~---~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~l~~~~~~~-----G~~~~~y~~~~~~~~~~-~~~yG 454 (482)
. ....+.+.| ++..|.. ...+...++.-++..+..+++.+.+.+. ...|.+|.+...+.++| +.|||
T Consensus 366 ai~~v~~~~TAf~h-R~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~~~~~~~yyg 444 (473)
T 3rja_A 366 QVTKVTNAETAYPH-RDKLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMDRDYATKVYYG 444 (473)
T ss_dssp GGGGSCTTTSSCCC-TTCSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSCHHHHHHHHHG
T ss_pred hhcCCCCCCCcccc-CCccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCccccchhHHHHHHH
Confidence 1 112234445 6554422 1122111110011122233333333221 12366776655555789 99999
Q ss_pred cchhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 455 SKWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 455 ~~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
+||+||++||++|||+|+|+.+|+|+|
T Consensus 445 ~n~~RL~~vK~kyDP~n~F~~~qsI~p 471 (473)
T 3rja_A 445 ENLARLQKLKAKFDPTDRFYYPQAVRP 471 (473)
T ss_dssp GGHHHHHHHHHHHCTTCTTCCTTSCCC
T ss_pred HHHHHHHHHhhccCchhhCCCCcCCCC
Confidence 999999999999999999999999987
No 5
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.2e-50 Score=417.96 Aligned_cols=445 Identities=14% Similarity=0.114 Sum_probs=284.4
Q ss_pred CCCCCeec-ChhHHHHHhh------hcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCcc--C
Q 044784 3 EPTDNLRT-DPGAIKLASI------DYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQ--A 73 (482)
Q Consensus 3 ~~~~~v~~-~~~~~~~~~~------~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~--~ 73 (482)
.+.+.|++ +++.|+.... +|+......|.+|++|.+++||+++|++| +++++|+++||||||+.+.+. .
T Consensus 20 ~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a--~~~~~~v~vrggGh~~~g~~~~~~ 97 (518)
T 3vte_A 20 ANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCS--KKVGLQIRTRSGGHDAEGMSYISQ 97 (518)
T ss_dssp --CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHH--HHHTCEEEEESSCCCTTCTTTCCS
T ss_pred CCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHH--HHcCCcEEEECCCcCCCCCccCCC
Confidence 36778887 7778887654 58777778999999999999999999999 799999999999999998773 3
Q ss_pred CCcEEEEcCCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCC--CccccCCCCCCccccccccccccCCCC
Q 044784 74 NDGVVVQMNSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRG--LSPVSWTDYLYPTVGGTLSNAGISGHT 151 (482)
Q Consensus 74 ~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g--~~~~~~~~~~~~tvGG~~~~~g~g~~~ 151 (482)
.+|++|||++|| .|++|++ ..+++||||+++.+|.++|.++| +..+. +.++.++|||+++++|+|..+
T Consensus 98 ~~gvvIdl~~l~------~i~vd~~---~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgvgG~~~gGg~G~~s 167 (518)
T 3vte_A 98 VPFVVVDLRNMH------SIKIDVH---SQTAWVEAGATLGEVYYWINEKNENLSFPG-GYCPTVGVGGHFSGGGYGALM 167 (518)
T ss_dssp SSEEEEECTTCC------CEEEETT---TTEEEEETTCBHHHHHHHHHHHCTTEECCC-CSCTTCBHHHHHHTCCCCTTH
T ss_pred CCeEEEECCCCc------eeEEeCC---CCEEEEeCCccHHHHHHHHHHhCCCceecC-CCCCCeeeeeeeCCCCCcccc
Confidence 579999999998 5699988 48999999999999999999875 44443 345789999999999999999
Q ss_pred CcCCCccccEEEEEEEecCCeEEEecCCCCchhHHhHhcC-CCCcEEEEEEEEEEeecCCceEEEEEEeC-ChhhHHHHH
Q 044784 152 YQKGPQITNVLELDVLTGKGEFVTCSPQKDSELFYAVLGG-LGQFGIITRARIVLGPAKKRVKWLRILYS-DFSSFSTDQ 229 (482)
Q Consensus 152 ~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~dl~~~~~g~-~g~~Giit~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (482)
++||.++|+|++++||++||++++. ..+++||||+++|+ +|+|||||+++||++|.|+....+.+.+. +.+++.+.+
T Consensus 168 ~~~G~~~D~V~~~evV~adG~iv~~-~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l 246 (518)
T 3vte_A 168 RNYGLAADNIIDAHLVNVDGKVLDR-KSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLF 246 (518)
T ss_dssp HHHCCGGGGEEEEEEECTTCCEECH-HHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHH
T ss_pred CCCCchhheEEEEEEEccCCeEEEe-eccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999999999965 34579999999998 89999999999999999997666666654 223443333
Q ss_pred HHHHhcCCCCCCCCCCcccceEeecC-CCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcchHHHHHHHhcc-ccC
Q 044784 230 ETLISTTGPSDKVMPDFLEGHLLMNQ-SPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEAKKVKQMLKSL-KGF 307 (482)
Q Consensus 230 ~~~~~~~g~~~~~~~e~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~~~ 307 (482)
..+.+. . +. .++-+.....+.. ++.+. .+..+..+.+.....|+|+ .+++.++++++ ..+
T Consensus 247 ~~~~~~--~-~~-~p~~l~~~~~~~~~~~~p~-----------~~~~~~~~~~~~~~~~~G~---~~~~~~~l~~~~~~l 308 (518)
T 3vte_A 247 NKWQNI--A-YK-YDKDLVLMTHFITKNITDN-----------HGKNKTTVHGYFSSIFHGG---VDSLVDLMNKSFPEL 308 (518)
T ss_dssp HHHHHH--G-GG-SCTTEEEEEEEEEESCC------------------CEEEEEEEEEEESC---HHHHHHHHHHHCGGG
T ss_pred HHHHHH--H-Hc-CCHhHeEEEEEcccCCCCC-----------CCcCCCceEEEEEEEEeCC---HHHHhhhhhhhhhhc
Confidence 333322 0 11 2343433332221 11110 1111122233434677787 45666777664 223
Q ss_pred CCCccccccchHHHHhhhhhHHH---HH-HHHccCC----CCCccc--cccccccchhhhhhHHHHHHHhhccCCCCceE
Q 044784 308 LPGFVFEKDVTYLQFLNRVHDQE---IE-LRKKGLW----DIPHPW--LNIFIPKSRITDFDNGVFRNILLKRNFTSSTV 377 (482)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~w----~~r~~~--~~~~vp~~~~~~~~~~~~~~l~~~~~~~~~~i 377 (482)
+.......+++|.+......... .. .+...+. ..+..+ .+.++...--.+.++.+++.+.+ .+...+.+
T Consensus 309 g~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~-~~~~~~~v 387 (518)
T 3vte_A 309 GIKKTDCKEFSWIDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYE-EDVGAGMY 387 (518)
T ss_dssp CCCGGGEEEECHHHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGG-SCTTTEEE
T ss_pred CCCccceeecchhhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHh-CCCCCeEE
Confidence 33222345667764322211000 00 0000010 111111 22233221122233333333433 22235678
Q ss_pred EEEEccCCCCCc--CcceeeccCC-ceEEEEEeeC--CCcchHHHHHHhhHHHHHHHHHc-----CccceecCCCCCC--
Q 044784 378 LVYPLLRSKWDE--RMSAVIAAEE-EVFYFVGFLD--ASADNWEAFDNKNKDILQFCVNA-----GIKFKQYLGHHAT-- 445 (482)
Q Consensus 378 ~~~~~~g~~~~~--~~~~~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~~~l~~~~~~~-----G~~~~~y~~~~~~-- 445 (482)
.+.++||+.... ....+.| ++ ++| .+.+.. ..++.-++..+..+++.+.+... +..|.+|.+...+
T Consensus 388 ~~~~~GGa~~~v~~~~TAf~h-R~~~~~-~~~~~~~w~~~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~ 465 (518)
T 3vte_A 388 VLYPYGGIMEEISESAIPFPH-RAGIMY-ELWYTASWEKQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKT 465 (518)
T ss_dssp EEEECCGGGGTSCTTSSSCCC-CTTCCE-EEEEEEEECCTTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCC
T ss_pred EEeecCccccCCCCCCCcccc-cCcceE-EEEEEEecCCcchhHHHHHHHHHHHHHhccccCCCCccccccCCCcccccc
Confidence 899999974332 2234455 55 444 222222 11222222223334444333322 2236667653322
Q ss_pred ----------hhhH-HHhhccchhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 446 ----------KEEW-IIHFGSKWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 446 ----------~~~~-~~~yG~~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
...| ++|||+||+||++||++|||+|+|+..|+|+|
T Consensus 466 ~~~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p 512 (518)
T 3vte_A 466 NHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPP 512 (518)
T ss_dssp CTTSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccccccchhhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCC
Confidence 1368 89999999999999999999999999999987
No 6
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=5.3e-50 Score=412.39 Aligned_cols=428 Identities=13% Similarity=0.107 Sum_probs=283.4
Q ss_pred CCeec-ChhHHHHHh------hhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC--CCc
Q 044784 6 DNLRT-DPGAIKLAS------IDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA--NDG 76 (482)
Q Consensus 6 ~~v~~-~~~~~~~~~------~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~--~~~ 76 (482)
+.|++ +++.|.... .+|+......|.+|++|.|++||+++|++| +++++|+++||||||+.+.+.. .+|
T Consensus 15 ~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a--~~~~~~v~vrGgGh~~~g~~~~~~~gg 92 (495)
T 3fw9_A 15 TVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCI--RKGSWTIRLRSGGHSYEGLSYTSDTPF 92 (495)
T ss_dssp EECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHH--HTSSCEEEEESSCCCTTCTTSCCSSCE
T ss_pred CeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHH--HHcCCeEEEECCCcCCCCccccCCCCe
Confidence 34555 677888764 478777788999999999999999999999 8999999999999999887764 358
Q ss_pred EEEEcCCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhC--CCccccCCCCCCccccccccccccCCCCCcC
Q 044784 77 VVVQMNSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTR--GLSPVSWTDYLYPTVGGTLSNAGISGHTYQK 154 (482)
Q Consensus 77 vvidl~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~--g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~ 154 (482)
++|||++|| .|++|++ .++++||||+++.+|.++|.++ |+.++. +.++.++|||+++++|+|..+++|
T Consensus 93 vvIdl~~m~------~i~vd~~---~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgigG~~~gGg~G~~~~~~ 162 (495)
T 3fw9_A 93 ILIDLMNLN------RVSIDLE---SETAWVESGSTLGELYYAITESSSKLGFTA-GWCPTVGTGGHISGGGFGMMSRKY 162 (495)
T ss_dssp EEEECTTCC------CEEEETT---TTEEEEETTCBHHHHHHHHHHHCSSEECCC-CSCTTCBHHHHHHTCCCCTTHHHH
T ss_pred EEEECCCCC------cEEEeCC---CCEEEEcCCCCHHHHHHHHHHhcCCceecc-CCCCCCeEeeeccCCCCcccccCC
Confidence 999999998 4699988 4899999999999999999999 666554 456789999999999999999999
Q ss_pred CCccccEEEEEEEecCCeEEEecCCCCchhHHhHhc-CCCCcEEEEEEEEEEeecCCceEEEEEEeCC-hhhHHHHHHHH
Q 044784 155 GPQITNVLELDVLTGKGEFVTCSPQKDSELFYAVLG-GLGQFGIITRARIVLGPAKKRVKWLRILYSD-FSSFSTDQETL 232 (482)
Q Consensus 155 G~~~d~v~~~~vv~~~G~~~~~~~~~~~dl~~~~~g-~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 232 (482)
|.++|+|++++||++||++++ ...+++||||+++| ++|+|||||+++||++|.|+....+.+.|+. .+++.+.+..+
T Consensus 163 G~~~D~v~~~~vV~adG~i~~-~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~ 241 (495)
T 3fw9_A 163 GLAADNVVDAILIDANGAILD-RQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKW 241 (495)
T ss_dssp CCGGGGEEEEEEECTTCCEEC-HHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHH
T ss_pred CchhheEEEEEEEcCCCCEEE-cCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHH
Confidence 999999999999999999997 34468999999998 7899999999999999999987777666642 23433333333
Q ss_pred HhcCCCCCCCCCCcccceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcchHHHHHHHhcc-ccCCCCc
Q 044784 233 ISTTGPSDKVMPDFLEGHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEAKKVKQMLKSL-KGFLPGF 311 (482)
Q Consensus 233 ~~~~g~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~~~~ 311 (482)
.... +. .++.+...... .+. .+...+.....|+|+ .+++.++++++ ..+++..
T Consensus 242 ~~~~---~~-~~~~l~~~~~~------------------~~~-~~~~~~~~~~~~~G~---~~~~~~~l~~~~~~lg~~~ 295 (495)
T 3fw9_A 242 QFVA---EE-LEEDFTLSVLG------------------GAD-EKQVWLTMLGFHFGL---KTVAKSTFDLLFPELGLVE 295 (495)
T ss_dssp HHHH---HH-SCTTEEEEEEE------------------EEE-TTEEEEEEEEEESSC---HHHHHHHHHHHCGGGCCCG
T ss_pred HHHH---hc-CChhHeEEEEE------------------cCC-CCceEEEEEEEEeCC---HHHHHHHHHHhhhhcCCCc
Confidence 2210 00 12222211110 011 122223333566776 35666777663 3344333
Q ss_pred cccccchHHHHhhhhhHHH--H-HHHHccC-CCCCccccccc----cccchhhhhhHHHHHHHhhccCCCCceEEEEEcc
Q 044784 312 VFEKDVTYLQFLNRVHDQE--I-ELRKKGL-WDIPHPWLNIF----IPKSRITDFDNGVFRNILLKRNFTSSTVLVYPLL 383 (482)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~--~-~~~~~~~-w~~r~~~~~~~----vp~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~ 383 (482)
....+++|.+......... + .+..... ...+.++.+.+ +|.+.++.++ +.+.+ .+ ...+.+.++|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~----~~~~~-~~--~~~~~~~~~G 368 (495)
T 3fw9_A 296 EDYLEMSWGESFAYLAGLETVSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLL----ERLSK-EP--NGFIALNGFG 368 (495)
T ss_dssp GGCEEECHHHHHHHHTTCSCGGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHH----HHHHH-CT--TEEEEEEECC
T ss_pred cceEEcCHHHHHHHHhcccchhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHH----HHHhh-CC--CcEEEecccC
Confidence 4456677775433211000 0 0000000 00111122333 3334444443 33332 22 3578899999
Q ss_pred CCCCCc--CcceeeccCC-ceEEEEEeeCCC----cchHHHHHHhhHHHHHHHHHc-----CccceecCCCCCC------
Q 044784 384 RSKWDE--RMSAVIAAEE-EVFYFVGFLDAS----ADNWEAFDNKNKDILQFCVNA-----GIKFKQYLGHHAT------ 445 (482)
Q Consensus 384 g~~~~~--~~~~~~~~~~-~~~~~i~~~~~~----~~~~~~~~~~~~~l~~~~~~~-----G~~~~~y~~~~~~------ 445 (482)
|+.... ....+.| ++ .+| .+.+...+ ++.-++..+..+++.+.+... +..|.+|.+...+
T Consensus 369 Ga~~~v~~~~TAf~h-R~~~~~-~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~ 446 (495)
T 3fw9_A 369 GQMSKISSDFTPFPH-RSGTRL-MVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGN 446 (495)
T ss_dssp GGGGTSCTTTSSCCC-CTTCCE-EEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTC
T ss_pred CccccCCCCCCCccc-cCccce-EEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCcccccccccc
Confidence 974322 2234445 54 444 22222211 111222223444444444332 2347777764332
Q ss_pred ----------hhhH-HHhhccchhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 446 ----------KEEW-IIHFGSKWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 446 ----------~~~~-~~~yG~~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
...| ++|||+||+||++||++|||+|+|+.+|+|+|
T Consensus 447 ~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~yDP~n~F~~~qsI~p 493 (495)
T 3fw9_A 447 KTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 493 (495)
T ss_dssp HHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccccccccchhhhhHHHHhHhHHHHHHHHHHhhCcHhhCCCCCCCCC
Confidence 2368 89999999999999999999999999999987
No 7
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=1.3e-49 Score=425.04 Aligned_cols=431 Identities=13% Similarity=0.179 Sum_probs=283.1
Q ss_pred HHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC-----CCcEEEEcCCCcCcCCCc
Q 044784 17 LASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA-----NDGVVVQMNSLNRFRNGT 91 (482)
Q Consensus 17 ~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~-----~~~vvidl~~~~~~~~~~ 91 (482)
.....|++.+...|.+||+|.|+|||+++|++| +++++||+|+|||||+.|+..+ ..+|+|||++|| +
T Consensus 193 d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A--~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMn-----r 265 (658)
T 4bby_A 193 EIFLLREGMFERIPDIVLWPTCHDDVVKIVNLA--CKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMN-----R 265 (658)
T ss_dssp HHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHH--HHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCC-----C
T ss_pred HHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHH--HHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCC-----C
Confidence 334456677889999999999999999999999 7999999999999999876553 346999999999 4
Q ss_pred eEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCc-cccCCCCCCccccccccccccCCCCCcCCCccccEEEEEEEecC
Q 044784 92 GILISGDRSSGFYADVGGEQLWIDVLNATLTRGLS-PVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVLELDVLTGK 170 (482)
Q Consensus 92 ~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~-~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~vv~~~ 170 (482)
+++||+++ ++++|||||++.+|.++|.++|+. ++.+++...+||||++++|+.|..+.+||.+.|+|+++|||++|
T Consensus 266 IleiD~~~---~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpd 342 (658)
T 4bby_A 266 ILWVDENN---LTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPR 342 (658)
T ss_dssp EEEEETTT---TEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETT
T ss_pred cEEEcCCC---CEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCC
Confidence 89999995 999999999999999999999998 45555777899999999999999999999999999999999999
Q ss_pred CeEEEecC----CCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHHHHHHHHHhcCCCCCCCCCCc
Q 044784 171 GEFVTCSP----QKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFSTDQETLISTTGPSDKVMPDF 246 (482)
Q Consensus 171 G~~~~~~~----~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~ 246 (482)
|++++.++ ..++||+|+++||+|+|||||+++|||+|.|+......+.|++++++.+.+.++.+. +..|. ++|+
T Consensus 343 G~i~~~~~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~~~-~~~ps-a~El 420 (658)
T 4bby_A 343 GVIEKSCQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAKQ-RCAPA-SIRL 420 (658)
T ss_dssp EEEECSCCCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHHT-TCCCS-EEEE
T ss_pred CcccccccccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHHHc-CCCcc-cccc
Confidence 99998654 357899999999999999999999999999998888888999999999999999887 66666 6788
Q ss_pred ccceEeecC----CCCC----cCCcc-cc---hhhhccccccceEEEEEEEEEeCCCcc----hHHHHHHHhccccCCCC
Q 044784 247 LEGHLLMNQ----SPLD----FYPQS-QR---RKITFLVNQYGILYIIEVVTYYDNKNE----AKKVKQMLKSLKGFLPG 310 (482)
Q Consensus 247 l~~~~~~~~----~~~~----~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~ 310 (482)
+|...+-.. +... .+.+. .. .++.......... ....+.+..+. .+.+.+++.... .
T Consensus 421 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~---~~~~~eg~~~~v~~~~~~~~~~~~~~g----~ 493 (658)
T 4bby_A 421 MDNQQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSV---ATLLFEGDREKVLQHEKQVYDIAAKFG----G 493 (658)
T ss_dssp ECHHHHHHHHHTSSCCCCTTCC--------------CCCTTTCEE---EEEEEEECHHHHHHHHHHHHHHHHTTT----C
T ss_pred ccHHHHHHHHhhcccccccccccccchhhhhhhhhccCChHHHHH---HHHHhcccHHHHHHHHHHHHHHHHhhC----c
Confidence 876432100 0000 00000 00 0011111111111 11233333211 112222222222 1
Q ss_pred ccccccchHHHHhhhhhHHHHHHHHccCCCCCccccccccccchhhhhhHHHHHHHhhc--cCCCC-ceEEEEEccCCCC
Q 044784 311 FVFEKDVTYLQFLNRVHDQEIELRKKGLWDIPHPWLNIFIPKSRITDFDNGVFRNILLK--RNFTS-STVLVYPLLRSKW 387 (482)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~vp~~~~~~~~~~~~~~l~~~--~~~~~-~~i~~~~~~g~~~ 387 (482)
...........+..+.............+ ......++.+|.+++.++++.+.+.+.+. ..... ..+.
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~avP~~~l~~~~~~v~~~l~~~~~~~g~~~~~~~--------- 563 (658)
T 4bby_A 494 LAAGEDNGQRGYLLTYVIAYMRDLGLEYY-IIGESFETSAPWDRVVDLCRNVKERIRRECKEKGVQFPPLS--------- 563 (658)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHHHTT-EEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHTTCSSCCEE---------
T ss_pred chhhhhHHHHHHHHhhHHHHHHhhccccC-CccceEEEEeeHHHHHHHHHHHHHHHHHHHHhcCccccccc---------
Confidence 11011000011111111110000000000 01113467899999999988664333321 00000 0111
Q ss_pred CcCcceeecc-CCc--eEEEEEeeCCC-cchHHHHHHhhHHHHHHHHHcCccceecCCCCCChhhH-HHhhcc-chhHHH
Q 044784 388 DERMSAVIAA-EEE--VFYFVGFLDAS-ADNWEAFDNKNKDILQFCVNAGIKFKQYLGHHATKEEW-IIHFGS-KWNTFQ 461 (482)
Q Consensus 388 ~~~~~~~~~~-~~~--~~~~i~~~~~~-~~~~~~~~~~~~~l~~~~~~~G~~~~~y~~~~~~~~~~-~~~yG~-~~~~L~ 461 (482)
...+.|. +++ +|+++.+.... .+..+.+.+....+.+.+.++|+...........+.+| ..+||+ .++.|+
T Consensus 564 ---~~~~~h~~dg~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~GGsiS~EHGIG~~k~~~l~~~~g~~~l~lmr 640 (658)
T 4bby_A 564 ---TCRVTQTYDAGACIYFYFAFNYRGISDPLAVFEQTEAAAREEILANGGSLSHHHGVGKLRKQWLKESISDVGFGMLK 640 (658)
T ss_dssp ---EEEEEEECSSEEEEEEEEEEECTTCSCHHHHHHHHHHHHHHHHHHTTCCSCSSSCCTTTSGGGHHHHHCHHHHHHHH
T ss_pred ---eEEEEEEeccCceEEEEecCCcCCchhHHHHHHHHHHHHHHHHHHcCCeEEEcccchHHHHHHHHHhcCHHHHHHHH
Confidence 1234444 555 45555554433 33445555666667777777655321111111123456 778886 899999
Q ss_pred HhhhcCCCCCCCCCCCcC
Q 044784 462 QRKTRFDPRMILSPGQRI 479 (482)
Q Consensus 462 ~iK~~~DP~nifnpgk~i 479 (482)
+||+.|||+|||||||+|
T Consensus 641 ~IK~a~DP~gILNPGKll 658 (658)
T 4bby_A 641 SVKDYVDPTNIFGNRNLL 658 (658)
T ss_dssp HHHHHHSTTCSSCSCCCC
T ss_pred HHHHHhCcccCCCCCCCC
Confidence 999999999999999986
No 8
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=2.4e-48 Score=400.05 Aligned_cols=427 Identities=15% Similarity=0.149 Sum_probs=287.0
Q ss_pred CCCCeec-ChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccCCCcEEEEcC
Q 044784 4 PTDNLRT-DPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQANDGVVVQMN 82 (482)
Q Consensus 4 ~~~~v~~-~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~~~~vvidl~ 82 (482)
+.+.|++ ++..|......|+..+...|.+|++|.|++||+++|++| +++++|++++|||||+.+.+...+|++|||+
T Consensus 12 ~~~~v~~p~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a--~~~~~~~~v~ggGh~~~~~~~~~~gvvi~l~ 89 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYA--CDNGLEISVRSGGHNPNGYATNDGGIVLDLR 89 (459)
T ss_dssp CSSEEECTTSTTHHHHHCCSCTTCCCCCSEEEECCSHHHHHHHHHHH--HHHTCCEEEESSCCCTTCTTCCSSSEEEECT
T ss_pred CCceEECCCCccHHHHHHHhhhhccCCCCEEEecCCHHHHHHHHHHH--HHcCCcEEEEcCCcCCCCccccCCeEEEECC
Confidence 4677777 777899889999988889999999999999999999999 7999999999999999987755689999999
Q ss_pred CCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCccccCCCCCCccccccccccccCCCCCcCCCccccEE
Q 044784 83 SLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVL 162 (482)
Q Consensus 83 ~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~ 162 (482)
+|| .|++|++ ..+++||||++|.+|.++|.++|+.++. +.++.++|||++++||+|.++++||.++|+|+
T Consensus 90 ~l~------~i~~d~~---~~~v~v~aG~~~~~l~~~l~~~Gl~~~~-g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~ 159 (459)
T 2bvf_A 90 LMN------SIHIDTA---GSRARIGGGVISGDLVKEAAKFGLAAVT-GMHPKVGFCGLALNGGVGFLTPKYGLASDNIL 159 (459)
T ss_dssp TCC------CEEEETT---TTEEEEETTCBHHHHHHHHHTTTEEECC-CSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEE
T ss_pred CCC------CEEECCC---CCEEEECCCCCHHHHHHHHHHcCCEecC-CCCCCcccceeecCCCCccccccccCHhHhEE
Confidence 998 4689988 4899999999999999999999999766 34578999999999999999999999999999
Q ss_pred EEEEEecCCeEEEecCCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCC--hh--hHHHHHHHHHhcCCC
Q 044784 163 ELDVLTGKGEFVTCSPQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSD--FS--SFSTDQETLISTTGP 238 (482)
Q Consensus 163 ~~~vv~~~G~~~~~~~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~g~ 238 (482)
++|||++||+++++++.+++||||+++|++|+|||||+++||++|.|+......+.|+. .+ ++++.+.++....
T Consensus 160 ~~~vV~~~G~i~~~~~~~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (459)
T 2bvf_A 160 GATLVTATGDVIYCSDDERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALNEM-- 237 (459)
T ss_dssp EEEEECTTSCEEEEESSSSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHT--
T ss_pred EEEEEcCCCeEEEeCCCCChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHHhC--
Confidence 99999999999999999999999999999999999999999999996655555666764 23 3344444444331
Q ss_pred CCCCCCCcccceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcchHHHHHHHhccccCCC-Cccccccc
Q 044784 239 SDKVMPDFLEGHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEAKKVKQMLKSLKGFLP-GFVFEKDV 317 (482)
Q Consensus 239 ~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~~~~~~~ 317 (482)
++.+...... +. +..+... +.....+.+. .++++++++++.++.+ ........
T Consensus 238 -----~~~~~~~~~~--------~~---------~~~~~~~-~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (459)
T 2bvf_A 238 -----ADHIYPSVFV--------GV---------DENRAPS-VTVCVGHLGG---LDIAERDIARLRGLGRTVSDSIAVR 291 (459)
T ss_dssp -----TTTCCCEEEE--------EE---------CTTCCEE-EEEEEECCSC---HHHHHHHHHHHHTTSCCSEECCEEE
T ss_pred -----cHhhcccccc--------Cc---------ccCCCce-EEEEEEEeCC---HHHHHHHHHHHHHhCcchhcceeec
Confidence 1221000010 00 0011122 1222345454 3567788888876543 33334556
Q ss_pred hHHHHhhhhhHHHHHHHHccCCCCCccc--cccccccchhhhhhHHHHHHHhhccC-CC-CceEEEEEccCCCCCcCcce
Q 044784 318 TYLQFLNRVHDQEIELRKKGLWDIPHPW--LNIFIPKSRITDFDNGVFRNILLKRN-FT-SSTVLVYPLLRSKWDERMSA 393 (482)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~w~~r~~~--~~~~vp~~~~~~~~~~~~~~l~~~~~-~~-~~~i~~~~~~g~~~~~~~~~ 393 (482)
+|.++... . ..........+..+ ...++|.+...+.++.+++.+.+ .+ .. .+.+.++ +|.......+.
T Consensus 292 ~~~~~~~~-~----~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~--gg~~~~~~~ta 363 (459)
T 2bvf_A 292 SYDEVVAL-N----AEVGSFEDGMSNLWIDREIAMPNARFAEAIAGNLDKFVS-EPASGGSVKLEIE--GMPFGNPKRTP 363 (459)
T ss_dssp CHHHHHHH-H----HHHSCCCCSCEEEEEEEEECSCHHHHHHHHHTTGGGCEE-ETTTTEEEEEEEE--CCCCCCTTCCS
T ss_pred CHHHHHhc-c----cccccCCCCCcceEeccccccCCCCCHHHHHHHHHHHhh-CCCCCceeEEEEe--CCccCCCCCCC
Confidence 77654322 0 00001112222333 35666644334444433222221 12 11 1223333 55322222334
Q ss_pred eeccCCceEEEEEeeCCCcc-hHHHHHHhhHHHHHHHHHcCc-----cceecCCCCCChhhH-HHhhccc-hhHHHHhhh
Q 044784 394 VIAAEEEVFYFVGFLDASAD-NWEAFDNKNKDILQFCVNAGI-----KFKQYLGHHATKEEW-IIHFGSK-WNTFQQRKT 465 (482)
Q Consensus 394 ~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~l~~~~~~~G~-----~~~~y~~~~~~~~~~-~~~yG~~-~~~L~~iK~ 465 (482)
+++ ++..+..+...+..+. ..+...+..+++.+.++.... .|.+|.+.. ..+| +.+||++ |+||++||+
T Consensus 364 ~~~-R~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~--~~~~~~~~yG~~n~~rL~~iK~ 440 (459)
T 2bvf_A 364 ARH-RDAMGVLALAEWSGAAPGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEV--TAEMVAEVYKPEVYSRLAAVKR 440 (459)
T ss_dssp SCC-CSSCEEEEEEEECTTSTTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSC--CHHHHHHHHCHHHHHHHHHHHH
T ss_pred ccc-CCcceEEEEEEeCCCccchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCc--chHHHHHHhCcchHHHHHHHHH
Confidence 555 5554432222221111 111223344445555555431 244443322 3567 9999986 999999999
Q ss_pred cCCCCCCCCCCCcCCC
Q 044784 466 RFDPRMILSPGQRIFN 481 (482)
Q Consensus 466 ~~DP~nifnpgk~i~~ 481 (482)
+|||+|+|+..|+|+|
T Consensus 441 kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 441 EYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHCTTCCCCSSSCCCC
T ss_pred HhCcccccCCCCCCCC
Confidence 9999999999999975
No 9
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=7.9e-49 Score=404.69 Aligned_cols=440 Identities=14% Similarity=0.109 Sum_probs=275.0
Q ss_pred CCCCCeec-ChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC-CCcEEEE
Q 044784 3 EPTDNLRT-DPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA-NDGVVVQ 80 (482)
Q Consensus 3 ~~~~~v~~-~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~-~~~vvid 80 (482)
.+.+.|++ +++.|+.....|+..+...|.+|++|.+++||+++|++| +++++|+++||||||+.+.+.. .+|++||
T Consensus 7 s~~~~~~~p~~~~y~~~~~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a--~~~~~~v~vrggGh~~~g~~~~~~~gvvId 84 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKA--VTEGRGVACRSGGHCGQDFVGTPRRDLVLD 84 (501)
T ss_dssp --CCEEEETTSTTHHHHTCCSCTTSCCCCSEEEECSSHHHHHHHHHHH--HHTTCCEEEESSCCCSSSTTTSSCCSEEEE
T ss_pred cCCCceECCCCcchHHHHHHHhhccCCCCCEEEEeCCHHHHHHHHHHH--HHcCCeEEEEeCCccCCCccccCCCEEEEE
Confidence 35666666 778899999999988889999999999999999999999 8999999999999999987765 4699999
Q ss_pred cCCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHH-hCCCccccCCCCCCccccccccccccCCCCCcCCCccc
Q 044784 81 MNSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATL-TRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQIT 159 (482)
Q Consensus 81 l~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~-~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d 159 (482)
|++|| .|++|++ ..+++||||+++.+|.++|. ++|+.++.+ .++.++|||+++++|+|..+++||.++|
T Consensus 85 l~~l~------~i~vd~~---~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G-~~~~vgvgG~~~gGg~G~~~~~~G~~~D 154 (501)
T 3pop_A 85 LHNLH------AIGPAAD---GAGVRVGSGATVDQVQKALFRRWNAALPLG-ACSAVGMGGLVAGGGYGPLSRQLGLVVD 154 (501)
T ss_dssp CTTCC------CEEECTT---SSSEEEETTCBHHHHHHHHHHHHSBCCCCC-SBTTCBHHHHHHHCCCCTTHHHHCCGGG
T ss_pred ecccC------CeEEcCC---CCEEEEECCcCHHHHHHHHHhhcCeEeCCC-CCCCceEeeccccCCCcccccccccHHH
Confidence 99998 5799988 48999999999999999997 579986654 4578899999999999999999999999
Q ss_pred cEEEEEEEe--cCCe--EEEe---cCCCCchhHHhHhcC-CCCcEEEEEEEEEE----------eecCC-ceEEEEEEeC
Q 044784 160 NVLELDVLT--GKGE--FVTC---SPQKDSELFYAVLGG-LGQFGIITRARIVL----------GPAKK-RVKWLRILYS 220 (482)
Q Consensus 160 ~v~~~~vv~--~~G~--~~~~---~~~~~~dl~~~~~g~-~g~~Giit~~~~~~----------~~~~~-~~~~~~~~~~ 220 (482)
+|+++|||+ +||+ ++++ +..+++||||+++|+ +|+|||||+++||+ +|.++ ....+.+.|+
T Consensus 155 ~v~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~ 234 (501)
T 3pop_A 155 HLHAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFP 234 (501)
T ss_dssp GEEEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEE
T ss_pred hEEEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEc
Confidence 999999999 8999 6666 345689999999998 69999999999998 66543 3444455665
Q ss_pred C--h--hhHHHHHHHHHhcCCCCCCCCCCcccceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcchHH
Q 044784 221 D--F--SSFSTDQETLISTTGPSDKVMPDFLEGHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEAKK 296 (482)
Q Consensus 221 ~--~--~~~~~~~~~~~~~~g~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (482)
. . +.+.+.+..+.+...... .++..+...+... .+. +...+.+.+ ...+.+... +
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~----~~~----------~~~~~~~~~--~~~~~g~~~---~ 293 (501)
T 3pop_A 235 WAMIDETSFVTVMRRFFEWHERHS--EPGSPESSLFATF----FVN----------HVSSGVLQL--MVQQDADVD---P 293 (501)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHSC--CTTCGGGGEEEEE----EEE----------CGGGCEEEE--EEEEETTTC---T
T ss_pred hhhcCHHHHHHHHHHHHHHHhhcc--CCCccccceEEEE----Eec----------CCCCCeEEE--EEEEeCChH---H
Confidence 2 1 111222222211100000 1222221111100 000 001122222 234455543 2
Q ss_pred HHHHHhcccc-------CCCCccccccchHHHHhhhhhHHHHHHHHccCCCCCccccccccccchhhhhhHHHHHHHhhc
Q 044784 297 VKQMLKSLKG-------FLPGFVFEKDVTYLQFLNRVHDQEIELRKKGLWDIPHPWLNIFIPKSRITDFDNGVFRNILLK 369 (482)
Q Consensus 297 ~~~ll~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~vp~~~~~~~~~~~~~~l~~~ 369 (482)
.+++++++.+ +.|... ...++|.+......... .......+.++.+.++....-.+.++.+++.+...
T Consensus 294 ~~~~l~~~~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~ 368 (501)
T 3pop_A 294 EGEILARFVASLTEGTGVVGIPR-GGVMSWLTGTRYMSQAD----CGDVMGARSASKSAYHRAAPTDEQLSVLHRHLHAD 368 (501)
T ss_dssp TCHHHHHHHHHHHTTSSCCCEEE-EEEEEHHHHHHHTCBCS----CGGGTTCEEEEEEEEESSCCCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhhhhccCCCccce-eEEeCHHHHHhhhcCCC----CCcccccccceecccccCCCCHHHHHHHHHHHHhc
Confidence 3344444432 123333 45667765433211000 00000112223333433222233333344444431
Q ss_pred cCCCCceEEEEEccCCCCCc--CcceeeccCCceEE-EEEeeCCCcchHHHHHHhhHHHHHHHHHc-----------Ccc
Q 044784 370 RNFTSSTVLVYPLLRSKWDE--RMSAVIAAEEEVFY-FVGFLDASADNWEAFDNKNKDILQFCVNA-----------GIK 435 (482)
Q Consensus 370 ~~~~~~~i~~~~~~g~~~~~--~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------G~~ 435 (482)
.+...+.+.+.++||+.... ....+.| ++..+. .+.....+++..++..+..+++.+.+... +..
T Consensus 369 ~~~~~~~~~~~~~GGav~~v~~~~TAf~h-R~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~ga 447 (501)
T 3pop_A 369 HPGQASYVMFNSYGGEINRRGPSDAAVPQ-RDSVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGC 447 (501)
T ss_dssp SCCTTEEEEEEECCGGGGGSCTTTSSCCC-CSCSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCC
T ss_pred CCCCceEEEEEecCcccccCCCCCCCccC-cCccEEEEEEEEeCCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCce
Confidence 12334567899999863221 1223444 655432 11111222222222223334444433321 112
Q ss_pred ceecCCCCCChhh-------H-HHhhccchhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 436 FKQYLGHHATKEE-------W-IIHFGSKWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 436 ~~~y~~~~~~~~~-------~-~~~yG~~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
|.+|.+.....++ | +.|||+||+||++||++|||+|+|+.+|+|+|
T Consensus 448 YvNy~d~dl~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 448 YINYPDADLLDPARNRSGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp CTTSCCGGGGCTTTCCSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred eccCCCccccccccccccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 4444433222122 8 89999999999999999999999999999986
No 10
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2.4e-48 Score=404.18 Aligned_cols=430 Identities=15% Similarity=0.131 Sum_probs=267.5
Q ss_pred eec-ChhHHHHHhh------hcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCcc----CCCc
Q 044784 8 LRT-DPGAIKLASI------DYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQ----ANDG 76 (482)
Q Consensus 8 v~~-~~~~~~~~~~------~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~----~~~~ 76 (482)
|.+ +.+.|..... .|+.....+|.+||+|.+++||+++|++| +++++|+++|||||++.|.+. ..+|
T Consensus 24 v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a--~~~~~~~~~r~gGh~~~g~s~~~~~~~~~ 101 (500)
T 3tsh_A 24 LYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCG--RRHSVRIRVRSGGHDYEGLSYRSLQPETF 101 (500)
T ss_dssp EEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHH--HHTTCEEEEESSCCCTTCTTTCCSSSCCE
T ss_pred EECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHH--HHCCCcEEEEcCCcCCCCCcCCCCCcCCe
Confidence 444 5556665432 38777778999999999999999999999 899999999999999887553 2578
Q ss_pred EEEEcCCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCcc-ccCCCCCCccccccccccccCCCCCcCC
Q 044784 77 VVVQMNSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLSP-VSWTDYLYPTVGGTLSNAGISGHTYQKG 155 (482)
Q Consensus 77 vvidl~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~-~~~~~~~~~tvGG~~~~~g~g~~~~~~G 155 (482)
++|||++|| .|++|++ .++++||||++|.+|+++|.++|+.+ ...+.++.+++||+++++|+|..+++||
T Consensus 102 ~~idl~~~~------~v~~d~~---~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G 172 (500)
T 3tsh_A 102 AVVDLNKMR------AVWVDGK---ARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYG 172 (500)
T ss_dssp EEEECTTCC------CEEEETT---TTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHC
T ss_pred EEEECcCCC------CEEECCC---CCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccC
Confidence 999999998 5799999 49999999999999999999999763 2234568899999999999999999999
Q ss_pred CccccEEEEEEEecCCeEEEecCCCCchhHHhHhcC-CCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHHHHHHHHHh
Q 044784 156 PQITNVLELDVLTGKGEFVTCSPQKDSELFYAVLGG-LGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFSTDQETLIS 234 (482)
Q Consensus 156 ~~~d~v~~~~vv~~~G~~~~~~~~~~~dl~~~~~g~-~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (482)
+.+|+|+++|||++||++++.+ .+++||||+++|+ +|+|||||+++||++|.|+....+.+.+...+.+.+.+..+..
T Consensus 173 ~~~d~v~~~~vV~a~G~i~~~~-~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (500)
T 3tsh_A 173 IAAENVIDVKLVDANGKLHDKK-SMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQV 251 (500)
T ss_dssp CGGGGEEEEEEECTTSCEECHH-HHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHH
T ss_pred ChhhheeeEEEECCCceEEECC-CCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHH
Confidence 9999999999999999988654 4689999999955 5799999999999999999876666666554544444444332
Q ss_pred cCCCCCCCCCCcccceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcchHHHHHHHhcccc-CCCCccc
Q 044784 235 TTGPSDKVMPDFLEGHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEAKKVKQMLKSLKG-FLPGFVF 313 (482)
Q Consensus 235 ~~g~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~~~~~~ 313 (482)
.. +. .++.+....+. .+... .....+.+.. +....++.+... +......
T Consensus 252 ~~---~~-~~~~l~~~~~~---------------------~~~~~--~~~~~~~g~~---~~~~~~~~~~~~~l~~~~~~ 301 (500)
T 3tsh_A 252 VA---PQ-LPADLMIRIIA---------------------QGPKA--TFEAMYLGTC---KTLTPLMSSKFPELGMNPSH 301 (500)
T ss_dssp HG---GG-SCTTEEEEEEE---------------------SSSEE--EEEEEESSCH---HHHHHHHHHHCGGGCCCGGG
T ss_pred hh---hc-cChhhEEEEEe---------------------cCCCc--EEEEEEecch---hhhhhhhhhcchhccCCccc
Confidence 21 10 12222111110 11111 1124455653 344444443321 1111111
Q ss_pred cccchHHHHhh------hhhHHHHHHHHccCCCCCccccccccccchhhhhhHHHHHHHhhccCCCCceEEEEEccCCCC
Q 044784 314 EKDVTYLQFLN------RVHDQEIELRKKGLWDIPHPWLNIFIPKSRITDFDNGVFRNILLKRNFTSSTVLVYPLLRSKW 387 (482)
Q Consensus 314 ~~~~~~~~~~~------~~~~~~~~~~~~~~w~~r~~~~~~~vp~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~g~~~ 387 (482)
.....+..... ..........+...+.....+....+......+..+.+++.+.. ......+.+.++||...
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Gga~~ 379 (500)
T 3tsh_A 302 CNEMSWIQSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLV--KPGAGIMIFDPYGATIS 379 (500)
T ss_dssp CEEECHHHHHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGG--STTCCEEEEEECCHHHH
T ss_pred cchhhhhccchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhc--CCCceEEEEcccCcccc
Confidence 22223322111 11111111111111111111222222222223333333333332 22234566777776521
Q ss_pred --CcCcceeeccCCceE-EEEEeeCCCcchHHHHHHhhHHHHHHHHHc--Cc---cceecCCCCC-------------Ch
Q 044784 388 --DERMSAVIAAEEEVF-YFVGFLDASADNWEAFDNKNKDILQFCVNA--GI---KFKQYLGHHA-------------TK 446 (482)
Q Consensus 388 --~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~--G~---~~~~y~~~~~-------------~~ 446 (482)
......+.|.++.++ ..+.....+++..+...+..+++.+.+... +. .|.+|.+... ..
T Consensus 380 ~~~~~ata~~~R~~~l~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~ 459 (500)
T 3tsh_A 380 ATPESATPFPHRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASG 459 (500)
T ss_dssp HSCTTSSSCCCCTTCCEEEEEEEEECSTTCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHH
T ss_pred CCCCccCcCcccCCcEEEEEEEEecCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEecccccccccccccccccccccc
Confidence 112223444134433 222222222222222234445555555543 11 1444433211 13
Q ss_pred hhH-HHhhccchhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 447 EEW-IIHFGSKWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 447 ~~~-~~~yG~~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
++| +.|||+||+||++||++|||+|+|+..|+|+|
T Consensus 460 ~~w~~~Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI~P 495 (500)
T 3tsh_A 460 KVWGQKYFKGNFERLAITKGKVDPTDYFRNEQSIPP 495 (500)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTSCCC
T ss_pred chHHHHhhhHHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 678 89999999999999999999999999999987
No 11
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=6.5e-46 Score=384.98 Aligned_cols=423 Identities=15% Similarity=0.129 Sum_probs=271.5
Q ss_pred ChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC--CCcEEEEcCCCcCcC
Q 044784 11 DPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA--NDGVVVQMNSLNRFR 88 (482)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~--~~~vvidl~~~~~~~ 88 (482)
+...|......|+..+...|.+|++|.|++||+++|++| +++++|+++||||||+.+.+.+ .+|++|||++||
T Consensus 24 ~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a--~~~~~~~~v~ggGh~~~~~~~~~~~~gvvIdl~~l~--- 98 (503)
T 1zr6_A 24 DSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCG--LDAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMY--- 98 (503)
T ss_dssp TSHHHHHHTSCSBGGGCCCCSEEEECCSHHHHHHHHHHH--HHHTCCEEEESSCCCTTCTTTTSSSSCEEEECTTCC---
T ss_pred CccchHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHH--HHcCCeEEEECCCcCCCCCcccCCCCcEEEECccCC---
Confidence 566788888899987889999999999999999999999 7999999999999999976553 569999999998
Q ss_pred CCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCC-CccccCCCCCCccccccccccccCCCCCcCCCccccEEEEEEE
Q 044784 89 NGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRG-LSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVLELDVL 167 (482)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g-~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~vv 167 (482)
.|++| + .++++||||++|.+|.++|.++| +..+. +.++.++|||.+.+||+|.++++||.++|+|+++|||
T Consensus 99 ---~i~~d-~---~~~v~v~aG~~~~~l~~~l~~~~gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV 170 (503)
T 1zr6_A 99 ---RVSVD-D---NNVATIQGGARLGYTALELLDQGNRALSH-GTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVV 170 (503)
T ss_dssp ---CEEEC-T---TSCEEEETTCBHHHHHHHHHHTTSEECCC-CSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEE
T ss_pred ---CEEEC-C---CCeEEEecCCCHHHHHHHHHHcCCEEeCC-CCCCcCchhhhhcCCCCCcccccccChhheEEEEEEE
Confidence 46999 6 37999999999999999997665 77665 3457889999999999999999999999999999999
Q ss_pred ecCCeEEEecCCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCC-hhhH---HHHHHHHHhcCCCCCCCC
Q 044784 168 TGKGEFVTCSPQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSD-FSSF---STDQETLISTTGPSDKVM 243 (482)
Q Consensus 168 ~~~G~~~~~~~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~g~~~~~~ 243 (482)
++||+++++++.+++||||+++|++|+|||||+++||++|.|+....+.+.|.- .+++ ++...++... . .
T Consensus 171 ~a~G~i~~~~~~~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---- 244 (503)
T 1zr6_A 171 LADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQN-T-M---- 244 (503)
T ss_dssp CTTSCEEEEBTTBSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHHHH-T-C----
T ss_pred ecCCCEEEeCCCCCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHHhh-c-C----
Confidence 999999999998999999999999999999999999999999866666665532 2222 2222333221 0 1
Q ss_pred CCcccceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcchHHHHHHHhccccCCCC---ccccccchHH
Q 044784 244 PDFLEGHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEAKKVKQMLKSLKGFLPG---FVFEKDVTYL 320 (482)
Q Consensus 244 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~---~~~~~~~~~~ 320 (482)
++.+.....+. ...+ .....+++. .++.+++++++.+..+. .......+|.
T Consensus 245 p~~~~~~~~~~---------------------~~~~--~~~~~~~g~---~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~ 298 (503)
T 1zr6_A 245 PRELSMRLEIN---------------------ANAL--NWEGNFFGN---AKDLKKILQPIMKKAGGKSTISKLVETDWY 298 (503)
T ss_dssp CTTBCCEEEEE---------------------TTEE--EEEEEESSC---HHHHHHHHHHHHHHTTSCEEEEEEEEECHH
T ss_pred ChhHEEEEEEe---------------------CCeE--EEEEEEECC---HHHHHHHHHHHHHhcCcCCCcCceeeCCHH
Confidence 12222111110 0122 112456665 45677888887543333 1223344555
Q ss_pred HHhhhhhHHHHHHHHccCCCCCcc--ccccccccchhhhhhHHHHHHHh-hccCCC--CceEEEEEccC---CCC--CcC
Q 044784 321 QFLNRVHDQEIELRKKGLWDIPHP--WLNIFIPKSRITDFDNGVFRNIL-LKRNFT--SSTVLVYPLLR---SKW--DER 390 (482)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~w~~r~~--~~~~~vp~~~~~~~~~~~~~~l~-~~~~~~--~~~i~~~~~~g---~~~--~~~ 390 (482)
+......... ......+...+.. ....+++. -..+.++.+++.+. ...... ...+.+.++|| ... ...
T Consensus 299 ~~~~~~~~~~-~~~~~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~ 376 (503)
T 1zr6_A 299 GQINTYLYGA-DLNITYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSND 376 (503)
T ss_dssp HHHTTSCTTC-CSSCSSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTT
T ss_pred HHHHHHcCCC-cccccCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcc
Confidence 3322111000 0000001111111 12233332 11233343433333 211111 13456788887 311 112
Q ss_pred cceeeccCCceE-EEE-EeeC----CCcchHHHHHHhhHHHHHHHHHc-C----ccceecCCCCCChhhH-HHhhccchh
Q 044784 391 MSAVIAAEEEVF-YFV-GFLD----ASADNWEAFDNKNKDILQFCVNA-G----IKFKQYLGHHATKEEW-IIHFGSKWN 458 (482)
Q Consensus 391 ~~~~~~~~~~~~-~~i-~~~~----~~~~~~~~~~~~~~~l~~~~~~~-G----~~~~~y~~~~~~~~~~-~~~yG~~~~ 458 (482)
...+.| ++..+ +.+ ..+. ..+...+...+..+++.+.+++. . +.|.+|.+......+| +.+||+||+
T Consensus 377 ~ta~~~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~~~~~~~~~yG~n~~ 455 (503)
T 1zr6_A 377 ETAYAH-RDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEAQKLYWRGNLE 455 (503)
T ss_dssp TSSCCC-TTCSEEEEEEEEETTTTTCCTTTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCCHHHHHHHHHGGGHH
T ss_pred cCCccc-ccceeEEEEEeeeccccCCCccchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccccchHHHHHHHhHHH
Confidence 223444 55544 222 2221 11100011122333333333322 1 1255554443333478 899999999
Q ss_pred HHHHhhhcCCCCCCCCCCCcCCC
Q 044784 459 TFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 459 ~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
||++||++|||+|+|+..|.|++
T Consensus 456 RL~~iK~kyDP~~vF~~~~~i~~ 478 (503)
T 1zr6_A 456 KLQAIKAKYDPEDVFGNVVSVEP 478 (503)
T ss_dssp HHHHHHHHHCTTCTTCCTTSCCC
T ss_pred HHHHHHHHhCchhhcCCCCCCCc
Confidence 99999999999999999999864
No 12
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=1.1e-46 Score=395.22 Aligned_cols=436 Identities=14% Similarity=0.153 Sum_probs=278.3
Q ss_pred CCeecChhHHHHHhh---------hcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC---
Q 044784 6 DNLRTDPGAIKLASI---------DYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA--- 73 (482)
Q Consensus 6 ~~v~~~~~~~~~~~~---------~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~--- 73 (482)
++|++|+.....|.. .|...+...|.+|++|.|++||+++|++| +++++|++++|||||+.+.+.+
T Consensus 105 ~~v~~~~~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a--~~~~~pv~~~GgGts~~gg~~~~~~ 182 (584)
T 2uuu_A 105 DQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLA--HKYNVVIIPMGGGSNIVGAIEPVSN 182 (584)
T ss_dssp GGEECSHHHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHH--HHHTCEEEEESSCCCSSCTTSCCCC
T ss_pred CeEEECHHHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHH--HHcCCeEEEEeCCCCCCCCCcccCC
Confidence 457777766554443 22233457899999999999999999999 7999999999999999977665
Q ss_pred -CCcEEEEcCCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCccccCCC-CCCccccccccccccCCCC
Q 044784 74 -NDGVVVQMNSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWTD-YLYPTVGGTLSNAGISGHT 151 (482)
Q Consensus 74 -~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~~-~~~~tvGG~~~~~g~g~~~ 151 (482)
.++|+|||++|| +++++|+++ .+++||||+++.+|.++|.++|+..+..|+ ...+||||++++|++|..+
T Consensus 183 ~~g~vvidl~~mn-----~I~~id~~~---~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~ 254 (584)
T 2uuu_A 183 ERFTVSIDMRRMN-----KVLWVDRRE---MTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQS 254 (584)
T ss_dssp SSCEEEEECTTCC-----CEEEEETTT---TEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTH
T ss_pred CCCEEEEECCCCC-----ccEEEcCCC---CEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccc
Confidence 357899999999 477999984 899999999999999999999998655453 4668999999999999999
Q ss_pred CcCCCccccEEEEEEEecCCeEEEe---cCCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHHHH
Q 044784 152 YQKGPQITNVLELDVLTGKGEFVTC---SPQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFSTD 228 (482)
Q Consensus 152 ~~~G~~~d~v~~~~vv~~~G~~~~~---~~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (482)
.+||.++|+|++++||++||++++. ....++||+|+++|++|+|||||+++||++|.|+......+.|++++++.+.
T Consensus 255 ~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~ 334 (584)
T 2uuu_A 255 DKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSA 334 (584)
T ss_dssp HHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHH
T ss_pred cCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHH
Confidence 9999999999999999999998762 3346899999999999999999999999999999777778899999999999
Q ss_pred HHHHHhcCCCCCCCCCCcccceEeec---CCCCC-cCCc------cc-chhhhccccccceEEEEEEEEEeCCCcc----
Q 044784 229 QETLISTTGPSDKVMPDFLEGHLLMN---QSPLD-FYPQ------SQ-RRKITFLVNQYGILYIIEVVTYYDNKNE---- 293 (482)
Q Consensus 229 ~~~~~~~~g~~~~~~~e~l~~~~~~~---~~~~~-~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 293 (482)
+..+... +..|. ++|++|...+.. ..... .... .. ...+..++....+.++++ +.+..+.
T Consensus 335 ~~~~~~~-~~~p~-a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llve---~~g~~~~v~~~ 409 (584)
T 2uuu_A 335 LQQIRSS-EVIPT-MIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIG---FEGPKKVVDFH 409 (584)
T ss_dssp HHHHHHH-TCCCS-EEEEECHHHHHHHHHTCCSCCCTTCCHHHHHHHHHHHTTTSCTTTCEEEEEE---EEECHHHHHHH
T ss_pred HHHHHhc-CCCce-EEEEechhHHHHHhhccCcccccchhhhhhHHHhhhhccCCCCCccEEEEEE---EecChHHHHHH
Confidence 9998876 66666 788888753210 00000 0000 00 000112332334544444 3343221
Q ss_pred hHHHHHHHhccccCCCCccccccchHHHHh-hhhhHHHHHHHHccCCCCC--ccccccccccchhhhhhHHHHHHH----
Q 044784 294 AKKVKQMLKSLKGFLPGFVFEKDVTYLQFL-NRVHDQEIELRKKGLWDIP--HPWLNIFIPKSRITDFDNGVFRNI---- 366 (482)
Q Consensus 294 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~w~~r--~~~~~~~vp~~~~~~~~~~~~~~l---- 366 (482)
.+.+.++++... .... ..+..- -|. .+..... .. ...|... ....++.+|.++++++++++ +++
T Consensus 410 ~~~~~~~~~~~g---~~~~-~~~~~~-lW~~r~~~~~~--l~-~~~~~~g~~~~~~Dv~VP~~~l~~~~~~~-~~~l~~~ 480 (584)
T 2uuu_A 410 RTSVFDILSKNA---AFGL-GSAPGK-TWAEKRYDLPY--IR-DFLLDHNMWVDVAETTVSYANLQTLWKDA-KQTFVKH 480 (584)
T ss_dssp HHHHHHHHHTTT---CEEE-EEESTT-HHHHGGGGHHH--HH-HHHHTTTEEEEEEEEEEEHHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHCC---Cccc-hHHHHH-HHHHhhhchHH--HH-hhhcccCCccccceEEeeHHHHHHHHHHH-HHHHHhH
Confidence 122333333322 1111 110000 011 1111110 11 1111111 11347889999999999976 444
Q ss_pred hhccCCCCceEEEEEccCCCCCcCcceeecc-CCc--eEEEEEeeCCCcchHHHHHHhhHHHHHHHHHcCccceecCCCC
Q 044784 367 LLKRNFTSSTVLVYPLLRSKWDERMSAVIAA-EEE--VFYFVGFLDASADNWEAFDNKNKDILQFCVNAGIKFKQYLGHH 443 (482)
Q Consensus 367 ~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~-~~~--~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~y~~~~ 443 (482)
..+ ... ..+.+ .+++|+ |++ .|+++.+....++..+.+.+....+.+.+.++|+....-....
T Consensus 481 ~~~-~g~-~~~~~------------~h~gH~gd~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gGsiS~EHGiG 546 (584)
T 2uuu_A 481 FKD-QGI-PAWIC------------AHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVG 546 (584)
T ss_dssp HHT-TTC-CEEEE------------EEEEEEETTEEEEEEEEEEECCTTCCTHHHHHHHHHHHHHHHHTTCCCC------
T ss_pred HHh-cCC-eeEEE------------EEEEeecCCCcEEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCcEEecccCC
Confidence 220 111 11111 234454 443 3444554322233344555666777777777644321111111
Q ss_pred CChhhH-HHhhcc-chhHHHHhhhcCCCCCCCCCCCcC
Q 044784 444 ATKEEW-IIHFGS-KWNTFQQRKTRFDPRMILSPGQRI 479 (482)
Q Consensus 444 ~~~~~~-~~~yG~-~~~~L~~iK~~~DP~nifnpgk~i 479 (482)
..+.+| ...||+ .++.|++||+.|||+|||||||.+
T Consensus 547 ~~k~~~l~~~~g~~~~~lmr~iK~a~DP~gIlNPGki~ 584 (584)
T 2uuu_A 547 YEHVPWMTRYATRGWINVYRSLKETIDPKDICNPRKLI 584 (584)
T ss_dssp ------------CTHHHHHHHHHHHHCTTCCBSCCCC-
T ss_pred cccHHHHHHhcCHHHHHHHHHHHHHcCCCcCCCCCCCC
Confidence 223344 455664 799999999999999999999975
No 13
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=8.4e-46 Score=386.59 Aligned_cols=432 Identities=14% Similarity=0.132 Sum_probs=289.5
Q ss_pred CCeecChhHHHHHhhhcCCc--CCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCC-CCccC--CCcEEEE
Q 044784 6 DNLRTDPGAIKLASIDYGHI--IKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTW-GQAQA--NDGVVVQ 80 (482)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~--~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~-~~~~~--~~~vvid 80 (482)
+.|.+++..+..|..+|+.. +...|.+|++|.|++||+++|++| +++++|++++|+|||+. |.+.+ .+|++||
T Consensus 31 ~~v~~~~~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a--~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvid 108 (520)
T 1wvf_A 31 DNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKIC--NEHKIPIWTISTGRNFGYGSAAPVQRGQVILD 108 (520)
T ss_dssp GGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHH--HHHTCCEEEESSCCCTTTTTTSCSSTTCEEEE
T ss_pred CeEecCcHHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHH--HHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEE
Confidence 35888998999999999764 567899999999999999999999 79999999999999997 65443 5799999
Q ss_pred cCCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCcc-cc-CCCCCCccccccccccccCCCCCcCCCcc
Q 044784 81 MNSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLSP-VS-WTDYLYPTVGGTLSNAGISGHTYQKGPQI 158 (482)
Q Consensus 81 l~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~-~~-~~~~~~~tvGG~~~~~g~g~~~~~~G~~~ 158 (482)
|++|| +++++|+++ .+++||||++|.+|.++|.++|+.. ++ +|+...+||||+++++|.|.. +||.+.
T Consensus 109 l~~m~-----~i~~id~~~---~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~ 178 (520)
T 1wvf_A 109 LKKMN-----KIIKIDPEM---CYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHF 178 (520)
T ss_dssp CTTCC-----CEEEEETTT---TEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGG
T ss_pred CCCCC-----ceEEECCCC---CEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccchh
Confidence 99999 377999984 8999999999999999999999984 33 354457899999988876654 899999
Q ss_pred ccEEEEEEEecCCeEEEecC--CCCchhHHhHhcCCC----------CcEEEEEEEEEEeecCCceEEEEEEeCChhhHH
Q 044784 159 TNVLELDVLTGKGEFVTCSP--QKDSELFYAVLGGLG----------QFGIITRARIVLGPAKKRVKWLRILYSDFSSFS 226 (482)
Q Consensus 159 d~v~~~~vv~~~G~~~~~~~--~~~~dl~~~~~g~~g----------~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (482)
|+|++++||++||++++++. ..++|+|++.+|+.| +|||||+++||++|.|+....+.+.|++++++.
T Consensus 179 d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~ 258 (520)
T 1wvf_A 179 MMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIV 258 (520)
T ss_dssp GGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHH
T ss_pred hcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHH
Confidence 99999999999999999874 356788777766644 999999999999999997777788999988765
Q ss_pred H---HHHHHHhcCCCCCCCCCCcccceEeecC-C-C-CCcCCc--ccc-hhhhcccc---ccceEEEEEEEEEeCCCcc-
Q 044784 227 T---DQETLISTTGPSDKVMPDFLEGHLLMNQ-S-P-LDFYPQ--SQR-RKITFLVN---QYGILYIIEVVTYYDNKNE- 293 (482)
Q Consensus 227 ~---~~~~~~~~~g~~~~~~~e~l~~~~~~~~-~-~-~~~~~~--~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 293 (482)
+ .+..+... ++.|. ++|++|....... . . ...+.. ..+ ..+..+.. ...+.++. .+++++..
T Consensus 259 ~~~~~~~~~~~~-~~~p~-a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~g~~~~v 333 (520)
T 1wvf_A 259 EIVDALRPLRMS-NTIPN-SVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYA---ALYGTQEQV 333 (520)
T ss_dssp HHHHHHHHHHHT-TSSCS-CEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHHHCCCSEEEEE---EEEESHHHH
T ss_pred HHHHHHHHHHHc-CCCcc-ceEeccHHHHHHHhcccchhhccCCCCCCHHHHHHHHHhcCCCceEEEE---EEeCCHHHH
Confidence 5 55666554 55566 7899887633110 0 0 001010 000 00000110 12344333 34444321
Q ss_pred ---hHHHHHHHhccccCCCCccccccchHHHHhhhhhHHHHHH------H--HccCCCC--Ccccccccccc--chhhhh
Q 044784 294 ---AKKVKQMLKSLKGFLPGFVFEKDVTYLQFLNRVHDQEIEL------R--KKGLWDI--PHPWLNIFIPK--SRITDF 358 (482)
Q Consensus 294 ---~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~w~~--r~~~~~~~vp~--~~~~~~ 358 (482)
.+.++++++... ... .....+.+...........+ . ....|.. ...+.+..+|. +.++++
T Consensus 334 ~~~~~~i~~~~~~~~---~~~--~~~~~~~~~~~~w~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~vp~~~~~l~~~ 408 (520)
T 1wvf_A 334 DVNWKIVTDVFKKLG---KGR--IVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQ 408 (520)
T ss_dssp HHHHHHHHHHHHHHT---CCE--EEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEESCHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CeE--EEecccchhhhHHHHHHHhhccCchhhhhccccccCCCceEEeccccCCCHHHHHHH
Confidence 112233333222 110 00000000000000000000 0 0011210 01123445677 899999
Q ss_pred hHHHHHHHhhccCCCCceEEEEEccCCCCCcCcceeecc-CCceEEEE--EeeCCCcchHHHHHHhhHHHHHHHHHcCcc
Q 044784 359 DNGVFRNILLKRNFTSSTVLVYPLLRSKWDERMSAVIAA-EEEVFYFV--GFLDASADNWEAFDNKNKDILQFCVNAGIK 435 (482)
Q Consensus 359 ~~~~~~~l~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~-~~~~~~~i--~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~ 435 (482)
++.+ +.+.+ +.+.....++|+ ++++|+++ .++..+++.+++..+...++++.+.++|+|
T Consensus 409 ~~~~-~~~~~-----------------~~~~~~~~~gh~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ehG~G 470 (520)
T 1wvf_A 409 AAMA-KRVLH-----------------KYGLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRADACFNELLDEFEKEGYA 470 (520)
T ss_dssp HHHH-HHHHH-----------------HTTCCCCEEEEECSSEEEEEEEEEEETTCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHH-HHHHH-----------------HcCCCeeEeecccCcceeeeeccccCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9876 66665 233345677888 99999977 455444445556667778888888888876
Q ss_pred ceecCCCCCChhhH-HHhhcc-chhHHHHhhhcCCCCCCCCCCCcCC
Q 044784 436 FKQYLGHHATKEEW-IIHFGS-KWNTFQQRKTRFDPRMILSPGQRIF 480 (482)
Q Consensus 436 ~~~y~~~~~~~~~~-~~~yG~-~~~~L~~iK~~~DP~nifnpgk~i~ 480 (482)
... .. ....+| ..+||+ .++.|++||+.|||+|||||||.+.
T Consensus 471 ~~k--~~-~~~~~~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki~~ 514 (520)
T 1wvf_A 471 VYR--VN-TRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGI 514 (520)
T ss_dssp BSC--CC-GGGHHHHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred ccc--cC-hhHhhhhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcCCC
Confidence 211 00 001244 677885 7899999999999999999999884
No 14
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=3e-45 Score=381.23 Aligned_cols=430 Identities=12% Similarity=0.100 Sum_probs=270.7
Q ss_pred eec-ChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC-CCcEEEEcCCCc
Q 044784 8 LRT-DPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA-NDGVVVQMNSLN 85 (482)
Q Consensus 8 v~~-~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~-~~~vvidl~~~~ 85 (482)
|++ ++..|+.....|+..+...|.+|++|.+++||+++|++| +++++|+++||||||+.+.+.. .+|++|||++||
T Consensus 36 v~~p~~~~Y~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a--~~~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l~ 113 (530)
T 2y3s_A 36 SVAPGDIRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRA--VRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLS 113 (530)
T ss_dssp EECTTSTTHHHHTCCSCTTCCCCCSEEEECCSHHHHHHHHHHH--HHTTCCEEEESSCCCSSSTTTCTTCCEEEECTTCC
T ss_pred EECCCCccHHHHHhHhhhhccCCCCEEEecCCHHHHHHHHHHH--HHcCCcEEEECCCCCCCCCcccCCCeEEEEcccCC
Confidence 344 678899999999988888999999999999999999999 7999999999999999986654 579999999998
Q ss_pred CcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHh-CCCccccCCCCCCccccccccccccCCCCCcCCCccccEEEE
Q 044784 86 RFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLT-RGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVLEL 164 (482)
Q Consensus 86 ~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~-~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~ 164 (482)
.|++|++ ..+|+||||++|.+|.++|.+ +|+..+. +.++.++|||+++++|+|.++++||.++|+|+++
T Consensus 114 ------~i~~d~~---~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 114 ------AVGFDEE---RGAFAVEAGATLGAVYKTLFRVWGVTLPG-GACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp ------CEEEETT---TTEEEEETTCBHHHHHHHHHHHHSCCCCC-CSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred ------CEEEcCC---CCEEEEeCCCCHHHHHHHHHhhcCeEEeC-CCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 4699998 489999999999999999985 8998665 4567899999999999999999999999999999
Q ss_pred EEEe--cCCeEE--EecCC-CCc--hhHHhHhcC-CCCcEEEEEEEEEE------------eecCC-ceEEEEEEeCC--
Q 044784 165 DVLT--GKGEFV--TCSPQ-KDS--ELFYAVLGG-LGQFGIITRARIVL------------GPAKK-RVKWLRILYSD-- 221 (482)
Q Consensus 165 ~vv~--~~G~~~--~~~~~-~~~--dl~~~~~g~-~g~~Giit~~~~~~------------~~~~~-~~~~~~~~~~~-- 221 (482)
|||+ ++|+++ +++++ +++ ||||+++|+ +|+|||||+++||+ +|.++ ......+.|+.
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 9999 559984 44654 555 499999986 59999999999999 88875 33444555542
Q ss_pred h--hhHHHHHH---HHHhcCCCCCCCCCCccc--ceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcch
Q 044784 222 F--SSFSTDQE---TLISTTGPSDKVMPDFLE--GHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEA 294 (482)
Q Consensus 222 ~--~~~~~~~~---~~~~~~g~~~~~~~e~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (482)
. +.+.+.++ ++.... .. ++..+ ....+. ++. ...+.+.+ ...+.+...
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~-~~----p~~~~~~~~~~~~------~~~----------~~~~~~~~--~~~~~g~~~-- 318 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQN-SG----PDSPWCDLYSVLA------LTR----------SQSGALAM--TTQLDATGP-- 318 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHS-CS----TTCGGGGEEEEEE------EEC----------GGGSEEEE--EEEEECCST--
T ss_pred cCHHHHHHHHHHHHHHhhhc-CC----CCcccceeEEEEE------ecc----------CCCCcEEE--EEEEeCCHH--
Confidence 2 11222222 222211 01 22111 111100 000 01122222 233556543
Q ss_pred HHHHHHHhcccc-----CC-CCccccccchHHHHhhhhhHHHHHHHHccCCCCCccccccccccchhhhhhHHHHHHHhh
Q 044784 295 KKVKQMLKSLKG-----FL-PGFVFEKDVTYLQFLNRVHDQEIELRKKGLWDIPHPWLNIFIPKSRITDFDNGVFRNILL 368 (482)
Q Consensus 295 ~~~~~ll~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~vp~~~~~~~~~~~~~~l~~ 368 (482)
+.+++++++.+ ++ +........+|.+....... . ..+....+..+...++....-.+.++.+++.+..
T Consensus 319 -~~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~ 392 (530)
T 2y3s_A 319 -DAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGI----A-GDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLTS 392 (530)
T ss_dssp -THHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHH----H-CCCCCCSEEEEEEEEESSCCCHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcC----C-CCCcccccceeeccccccCCCHHHHHHHHHHHHh
Confidence 24455555332 12 33333455667654333211 0 1110001222333333322222344444444443
Q ss_pred cc-CCCCceEEEEEccCCC--CCcCcceeeccCCceE-EEEEeeCCCcchHHHHHHhhHHHHHHHHHc--Cc------cc
Q 044784 369 KR-NFTSSTVLVYPLLRSK--WDERMSAVIAAEEEVF-YFVGFLDASADNWEAFDNKNKDILQFCVNA--GI------KF 436 (482)
Q Consensus 369 ~~-~~~~~~i~~~~~~g~~--~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~--G~------~~ 436 (482)
.. ....+.+.+.++||.. .......+.| ++..+ ..+...+..++..+...+..+++.+.+... |. ..
T Consensus 393 ~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~-R~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~ 471 (530)
T 2y3s_A 393 TDYDNPAGVVALIAYGGKVNAVPADRTAVAQ-RDSILKIVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAAD 471 (530)
T ss_dssp SSSCCTTCEEEEEECCGGGGGSCTTSSSCCC-CSCSEEEEEEEEECCTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBC
T ss_pred cCCCCCceEEEEEecCCccccCCCCcCcccc-cccceeEEEEEecCCCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCC
Confidence 11 1223567788888842 1222234444 55533 222222222222222233344444433311 11 11
Q ss_pred eecCCCCCCh----------hhH-HHhhccchhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 437 KQYLGHHATK----------EEW-IIHFGSKWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 437 ~~y~~~~~~~----------~~~-~~~yG~~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
..|+++.... .+| +.|||+||+||++||++|||+|+|+..|+|++
T Consensus 472 g~Y~Ny~d~~~~~~~~~~s~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p 527 (530)
T 2y3s_A 472 GAYVNYPDVDLADEEWNTSGVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRV 527 (530)
T ss_dssp CCCTTSCCGGGGCTTTCCSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ceEeCCcCccccccccccchhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCC
Confidence 2455543221 128 89999999999999999999999999999976
No 15
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1.3e-45 Score=383.70 Aligned_cols=203 Identities=14% Similarity=0.125 Sum_probs=175.6
Q ss_pred CCeec-ChhHHHHHh-hhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC-CCcEEEEcC
Q 044784 6 DNLRT-DPGAIKLAS-IDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA-NDGVVVQMN 82 (482)
Q Consensus 6 ~~v~~-~~~~~~~~~-~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~-~~~vvidl~ 82 (482)
..|++ ++..|.... ..|+......|.+|++|.+++||+++|++| +++++|+++||||||+.+.+.. .+|++|||+
T Consensus 32 ~~v~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a--~~~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~ 109 (523)
T 2wdx_A 32 PVKVTPDDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVEET--VRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMS 109 (523)
T ss_dssp CEEECTTSTTHHHHHTCSSCTTCCCCCSEEEECSSHHHHHHHHHHH--HHHTCCEEEESSCCCSSSSSSSTTCCEEEECT
T ss_pred CeEECCCCcchHHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHH--HHcCCcEEEEcCCCCCCCCccCCCCeEEEEcc
Confidence 44555 677899888 899988888999999999999999999999 7999999999999999987765 579999999
Q ss_pred CCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHH-hCCCccccCCCCCCccccccccccccCCCCCcCCCccccE
Q 044784 83 SLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATL-TRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNV 161 (482)
Q Consensus 83 ~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~-~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v 161 (482)
+|| .|++|++ ..+++||||++|.+|.++|. ++|+..+. +.++.++|||+++++|+|.++++||.++|+|
T Consensus 110 ~m~------~i~~d~~---~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v 179 (523)
T 2wdx_A 110 LLT------EIAYDPS---MNAFLIEPGNTLSEVYEKLYLGWNVTIPG-GVCGGVGVGGHICGGGYGPLSRQFGSVVDYL 179 (523)
T ss_dssp TCC------CEEEETT---TTEEEECTTCBHHHHHHHHHHHHSCCCCC-CCCTTCBHHHHHHHTCCCTTHHHHCCGGGGE
T ss_pred cCC------CEEEcCC---CCEEEEcCCCCHHHHHHHHHHhcCeEEcc-CCCCCCeeCccccCCCCCcccccccChhheE
Confidence 998 4699988 48999999999999999998 59998766 4567899999999999999999999999999
Q ss_pred EEEEEEecC--CeEEEe--cCC-CCch--hHHhHhcC-CCCcEEEEEEEEEE-----------eecCCc-eEEEEEEeC
Q 044784 162 LELDVLTGK--GEFVTC--SPQ-KDSE--LFYAVLGG-LGQFGIITRARIVL-----------GPAKKR-VKWLRILYS 220 (482)
Q Consensus 162 ~~~~vv~~~--G~~~~~--~~~-~~~d--l~~~~~g~-~g~~Giit~~~~~~-----------~~~~~~-~~~~~~~~~ 220 (482)
+++|||++| |+++++ ++. +++| |||++||+ +|+|||||+++||+ +|.|+. .....+.|+
T Consensus 180 ~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (523)
T 2wdx_A 180 YAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFD 258 (523)
T ss_dssp EEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECC
T ss_pred EEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEec
Confidence 999999954 997544 553 5555 99999975 69999999999999 998863 445566775
No 16
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.7e-44 Score=375.59 Aligned_cols=432 Identities=13% Similarity=0.123 Sum_probs=269.4
Q ss_pred CCCeec-ChhHHHHHh-hhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC-CCcEEEEc
Q 044784 5 TDNLRT-DPGAIKLAS-IDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA-NDGVVVQM 81 (482)
Q Consensus 5 ~~~v~~-~~~~~~~~~-~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~-~~~vvidl 81 (482)
...|++ +++.|+... ..|+......|.+|++|.+++||+++|++| +++++|+++||||||+.+.+.. .+|++|||
T Consensus 29 ~~~v~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a--~~~~~~~~vrggGh~~~g~~~~~~~gvvIdl 106 (521)
T 2ipi_A 29 ALVKVDRVDRRYQDLVTRGFNGRFRGRPDVVYVVHTADQVVDAVNQA--MAAGQRIAVRSGGHCFEGFVDDPAVRAVIDM 106 (521)
T ss_dssp CCCEEESSSTTHHHHHTCCSCTTCCCCCSEEEECSSHHHHHHHHHHH--HHHTCCEEEESSCCCTTCGGGCTTCCEEEEC
T ss_pred CCeEECCCCcchHHHHhccccccccCCCCEEEEcCCHHHHHHHHHHH--HHcCCeEEEECCCcCCCCCcccCCCeEEEec
Confidence 345555 777899888 999988889999999999999999999999 7999999999999999987653 57999999
Q ss_pred CCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHH-hCCCccccCCCCCCccccccccccccCCCCCcCCCcccc
Q 044784 82 NSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATL-TRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITN 160 (482)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~-~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~ 160 (482)
++|| .|++|++ ..+|+||||++|.+|+++|. ++|+..+.+. ++.++|||++++||+|..+++||.++|+
T Consensus 107 ~~l~------~i~~d~~---~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~-~~~vgvgG~~~gGg~g~~s~~~G~~~D~ 176 (521)
T 2ipi_A 107 SQMR------QVFYDSG---KRAFAVEPGATLGETYRALYLDWGVTIPAGV-CPQVGVGGHVLGGGYGPLSRRDGVVADH 176 (521)
T ss_dssp TTCC------CEEEETT---TTEEEECTTSBHHHHHHHHHHHHSBCCCCCS-CTTCBHHHHTTTTCCCTTHHHHCCGGGG
T ss_pred ccCC------CeEEeCC---CCEEEEeCCcCHHHHHHHHHHhcCceeCCCC-CCCcccCCcccCCCCCccccccccHhhc
Confidence 9998 5699988 48999999999999999997 7999876644 5679999999999999999999999999
Q ss_pred EEEEEEEecC--CeEEE--ecCC-CCc--hhHHhHhcC-CCCcEEEEEEEEEE-----------eecCCc-eEEEEEEeC
Q 044784 161 VLELDVLTGK--GEFVT--CSPQ-KDS--ELFYAVLGG-LGQFGIITRARIVL-----------GPAKKR-VKWLRILYS 220 (482)
Q Consensus 161 v~~~~vv~~~--G~~~~--~~~~-~~~--dl~~~~~g~-~g~~Giit~~~~~~-----------~~~~~~-~~~~~~~~~ 220 (482)
|+++|||++| |++++ +++. +++ ||||+++|+ +|+|||||+++||+ +|.|+. .....+.|+
T Consensus 177 v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 256 (521)
T 2ipi_A 177 LYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWD 256 (521)
T ss_dssp EEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEE
T ss_pred EEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEec
Confidence 9999999977 99743 4543 445 599999985 69999999999999 898763 334445553
Q ss_pred --Ch--hhHHHHHHHHHhcCCCCCCCCCCccc--ceEeecCCCCCcCCcccchhhhccccccceEEEEEEEEEeCCCcch
Q 044784 221 --DF--SSFSTDQETLISTTGPSDKVMPDFLE--GHLLMNQSPLDFYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNEA 294 (482)
Q Consensus 221 --~~--~~~~~~~~~~~~~~g~~~~~~~e~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (482)
+. +.+.+.++.+.+...... .++... -...+. + .+...+.+.+ ...+.+...
T Consensus 257 ~~~~~~~~~~~~l~~~~~~~~~~~--~p~~~~~~l~~~~~------~----------~~~~~~~~~~--~~~~~g~~~-- 314 (521)
T 2ipi_A 257 WSALTEEAFTRIIDNHGAWHQSNS--AAGTPYASMHSVFY------L----------NSRAAGQILL--DIQIDGGLD-- 314 (521)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHSC--SSSSGGGGCEEEEE------E----------ECTTSCEEEE--EEEEETTST--
T ss_pred ccccCHHHHHHHHHHHHHHHHhcc--CCCccccceEEEEE------e----------ccCCCCceEE--EEEeccCHH--
Confidence 22 112233332222100000 112111 011100 0 0001122222 234556543
Q ss_pred HHHHHHHhcccc-----CC-CCccccccchHHHHhhhhhHHHHHHHHccCCC-CCccccccccccchhhhhhHHHHHHHh
Q 044784 295 KKVKQMLKSLKG-----FL-PGFVFEKDVTYLQFLNRVHDQEIELRKKGLWD-IPHPWLNIFIPKSRITDFDNGVFRNIL 367 (482)
Q Consensus 295 ~~~~~ll~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~r~~~~~~~vp~~~~~~~~~~~~~~l~ 367 (482)
+.+++++++.+ ++ +........+|.+....... .... .+......++....-.+.++.+++.+.
T Consensus 315 -~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~ 385 (521)
T 2ipi_A 315 -GAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKF--------DTGGFDRTKSKGAYLRKPWTAAQAATLYRHLS 385 (521)
T ss_dssp -THHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCC--------CCTTCCEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcC--------CCCCCccceeeccccccCCCHHHHHHHHHHHH
Confidence 24445554322 11 22333444566554332110 0000 011112222221111233444444444
Q ss_pred hccCCCCceEEEEEccCC--CCCcCcceeeccCCceE-EEEEeeCCCcchHHHHHHhhHHHHHHHHHc--Cc------cc
Q 044784 368 LKRNFTSSTVLVYPLLRS--KWDERMSAVIAAEEEVF-YFVGFLDASADNWEAFDNKNKDILQFCVNA--GI------KF 436 (482)
Q Consensus 368 ~~~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~--G~------~~ 436 (482)
. .+...+.+.+.++||. ......+.+.| ++..+ ..+...+..+...+...+..+++.+.+... |. ..
T Consensus 386 ~-~~~~~~~~~~~~~GG~v~~~~~~~ta~~~-R~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 463 (521)
T 2ipi_A 386 A-DSQVWGEVSLYSYGGKVNSVPETATATAQ-RDSIIKVWMSATWMDPAHDDANLAWIREIYREIFATTGGVPVPDDRTE 463 (521)
T ss_dssp S-CCSSEEEEEEEECCGGGGGSCTTTSSCCC-CSCSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBC
T ss_pred h-CCCCceEEEEEecCCcccCCCCccccccc-cchhhhcceeEecCCCCchHHHHHHHHHHHHHHHhhhcCCCcccCCCC
Confidence 3 2233356678888884 12222334444 55533 222222222222222233344444444311 11 11
Q ss_pred eecCCCCCCh---h-------hH-HHhhccchhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 437 KQYLGHHATK---E-------EW-IIHFGSKWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 437 ~~y~~~~~~~---~-------~~-~~~yG~~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
..|+++.... + +| +.|||+||+||++||++|||+|+|+..|+|+|
T Consensus 464 g~Y~Ny~d~~~~~~~~~~~~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p 519 (521)
T 2ipi_A 464 GTFINYPDVDLVDERWNTSGVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRP 519 (521)
T ss_dssp CCCTTSCCGGGGCTTTSCCSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ceEeCCCCccccccccccchhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCC
Confidence 2455442221 1 38 89999999999999999999999999999976
No 17
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=100.00 E-value=6.9e-46 Score=389.61 Aligned_cols=430 Identities=14% Similarity=0.134 Sum_probs=285.9
Q ss_pred CCeecChhHHHH----Hhhh------cCC--cCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCC-CCcc
Q 044784 6 DNLRTDPGAIKL----ASID------YGH--IIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTW-GQAQ 72 (482)
Q Consensus 6 ~~v~~~~~~~~~----~~~~------~~~--~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~-~~~~ 72 (482)
++|++|+..... |..+ |.. .+...|.+|++|.|++||+++|++| +++++|++++|+|||+. |...
T Consensus 35 ~~v~~d~~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a--~~~~~pv~~~g~Gt~~~~gg~~ 112 (560)
T 1e8g_A 35 ENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLA--NKFSFPLWPISIGRNSGYGGAA 112 (560)
T ss_dssp GGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHH--HHHTCCEEEESSCCCTTTTTTC
T ss_pred ccEecCHHHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHH--HHcCCcEEEecCCCcCCcCCCC
Confidence 468888877777 7766 543 3577899999999999999999999 79999999999999997 6555
Q ss_pred C--CCcEEEEc-CCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCc--c-ccCCCCCCccccccccccc
Q 044784 73 A--NDGVVVQM-NSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLS--P-VSWTDYLYPTVGGTLSNAG 146 (482)
Q Consensus 73 ~--~~~vvidl-~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~--~-~~~~~~~~~tvGG~~~~~g 146 (482)
+ .+||+||| ++|| +++++|+++ .+++||||+++.+|.++|.++|+. . +.+++...+||||++++||
T Consensus 113 p~~~~gvvidl~~~mn-----~il~id~~~---~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g 184 (560)
T 1e8g_A 113 PRVSGSVVLDMGKNMN-----RVLEVNVEG---AYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERG 184 (560)
T ss_dssp CSSTTCEEEECTTTCC-----CEEEEETTT---TEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTC
T ss_pred CCcCCEEEEEchHhcC-----CeEEEcCCC---CEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCC
Confidence 3 57999999 9999 477999984 899999999999999999999998 3 3333334689999999887
Q ss_pred cCCCCCcCCCccccEEEEEEEecCCeEEEecCCC--Cc---------------hhHHhHh-c----------CCCCcEEE
Q 044784 147 ISGHTYQKGPQITNVLELDVLTGKGEFVTCSPQK--DS---------------ELFYAVL-G----------GLGQFGII 198 (482)
Q Consensus 147 ~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~--~~---------------dl~~~~~-g----------~~g~~Gii 198 (482)
.|.. +||.+.|+|++++||++||++++++... ++ +.+|.++ + ++|+||||
T Consensus 185 ~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiI 262 (560)
T 1e8g_A 185 VGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIV 262 (560)
T ss_dssp BCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEE
T ss_pred CCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEE
Confidence 6653 9999999999999999999999997532 20 3444443 2 35899999
Q ss_pred EEEEEEEeecCCceEEEEEEeCChhhHHHHH---HHHHhcCCCCCCCCCCcccceE---eecCCCCCcCCc--c-cc-hh
Q 044784 199 TRARIVLGPAKKRVKWLRILYSDFSSFSTDQ---ETLISTTGPSDKVMPDFLEGHL---LMNQSPLDFYPQ--S-QR-RK 268 (482)
Q Consensus 199 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~e~l~~~~---~~~~~~~~~~~~--~-~~-~~ 268 (482)
|++|||++|.|+....+.+.|++++++.+.+ .+++.. ++.|. .+|++|... .+.. ...+.. . .+ ..
T Consensus 263 t~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~-~~~p~-~~el~d~~~~~~~l~~--~~~~~~~~~~~p~~~ 338 (560)
T 1e8g_A 263 TKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLRLG-MALQN-VPTIRHILLDAAVLGD--KRSYSSRTEPLSDEE 338 (560)
T ss_dssp EEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHHHT-TSSCS-CCEEEEHHHHHHHHCC--GGGTCCCSSCCCHHH
T ss_pred EEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHHHc-CCCcc-eeEEechHHHhhhhhh--hhhhccCCCCCCHHH
Confidence 9999999999998778888999988866654 445544 55565 688887662 0111 111111 0 00 00
Q ss_pred hhcccc---ccceEEEEEEEEEeCCCcc----hHHHHHHHhccccCCCCccccccch-HHHHhhhhhHH---HH-HHHHc
Q 044784 269 ITFLVN---QYGILYIIEVVTYYDNKNE----AKKVKQMLKSLKGFLPGFVFEKDVT-YLQFLNRVHDQ---EI-ELRKK 336 (482)
Q Consensus 269 ~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~-~~~~~ 336 (482)
+..+.. .+.+.++++ +++.+.. .+.+.++++.... .. ........ ...+..+.... .. ...+.
T Consensus 339 ~~~l~~~~~~~~~~l~~e---~~g~~~~v~~~~~~i~~i~~~~~~-~~-~~~~~~~~e~~~~w~R~~~~~~~p~~~~~~~ 413 (560)
T 1e8g_A 339 LDKIAKQLNLGRWNFYGA---LYGPEPIRRVLWETIKDAFSAIPG-VK-FYFPEDTPENSVLRVRDKTMQGIPTYDELKW 413 (560)
T ss_dssp HHHHHHHHTCCSEEEEEE---EESCHHHHHHHHHHHHHHHTTSTT-CE-EECGGGSCTTCHHHHHHHHTTTCCCCGGGGG
T ss_pred HHHHHhhcCCCceEEEEE---EeCCHHHHHHHHHHHHHHHHhCCC-ce-eeccccchhhhhHHHHHhhcccCchhhhhcc
Confidence 000000 123454443 4454321 1223344443321 00 00010000 00010010000 00 00001
Q ss_pred cCCCC--Ccccccccccc--chhhhhhHHHHHHHhhccCCCCceEEEEEccCCCCCcCcceeecc-CCceEEEEE--eeC
Q 044784 337 GLWDI--PHPWLNIFIPK--SRITDFDNGVFRNILLKRNFTSSTVLVYPLLRSKWDERMSAVIAA-EEEVFYFVG--FLD 409 (482)
Q Consensus 337 ~~w~~--r~~~~~~~vp~--~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~-~~~~~~~i~--~~~ 409 (482)
..|.. ...+.+..+|. ++++++++.+ +.+.+ +++..+..++|+ ||++|+++. ++.
T Consensus 414 ~~~~~~~~~~~~d~~vP~~~~~l~~~~~~~-~~~~~-----------------~~g~~~~~~gH~gdGnlH~~i~~~~~~ 475 (560)
T 1e8g_A 414 IDWLPNGAHLFFSPIAKVSGEDAMMQYAVT-KKRCQ-----------------EAGLDFIGTFTVGMREMHHIVCIVFNK 475 (560)
T ss_dssp GGGSTTEEEEEECBEECSSHHHHHHHHHHH-HHHHH-----------------HHTCCCCEEEEECSSCEEEEEEEEEET
T ss_pred ccccCCCceEEEeeecCCCHHHHHHHHHHH-HHHHH-----------------HcCCceEEEEEecCCeEEEEecccCCC
Confidence 12221 12245678888 8999999976 66765 334456678888 999999884 555
Q ss_pred CCcchHHHHHHhhHHHHHHHHHcCcc--cee--cCCCCCChhhHHHhh---cc-chhHHHHhhhcCCCCCCCCCCCcCC
Q 044784 410 ASADNWEAFDNKNKDILQFCVNAGIK--FKQ--YLGHHATKEEWIIHF---GS-KWNTFQQRKTRFDPRMILSPGQRIF 480 (482)
Q Consensus 410 ~~~~~~~~~~~~~~~l~~~~~~~G~~--~~~--y~~~~~~~~~~~~~y---G~-~~~~L~~iK~~~DP~nifnpgk~i~ 480 (482)
.+++.+++..+...++++.+.++|+| +.+ |+ +.+...| |+ .++.|++||+.|||+|||||||++.
T Consensus 476 ~~~~~~~~~~~~~~~l~~~~~eHGiG~~k~~~~~l------~~~~~~~~~~g~~~~~lm~~iK~~~DP~gILNPGk~~~ 548 (560)
T 1e8g_A 476 KDLIQKRKVQWLMRTLIDDCAANGWGEYRTHLAFM------DQIMETYNWNNSSFLRFNEVLKNAVDPNGIIAPGKSGV 548 (560)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCCBSCCCGGGH------HHHHHHTCHHHHHHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccchhHH------HHHHHHhccCCHHHHHHHHHHHHHcCccCCCCCCcccc
Confidence 55566777778889999999999887 333 44 1235556 54 7999999999999999999999983
No 18
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=100.00 E-value=8.6e-45 Score=378.01 Aligned_cols=423 Identities=11% Similarity=0.054 Sum_probs=287.9
Q ss_pred CCeecChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccCCC------cEEE
Q 044784 6 DNLRTDPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQAND------GVVV 79 (482)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~~~------~vvi 79 (482)
++|.+++.....|.++|+. +...|.+|++|.|++||+++|++| +++++|++++|||||+.|++.+.+ +++|
T Consensus 23 ~~v~~~~~~~~~y~~d~~~-~~~~p~~Vv~P~s~~eV~~iv~~a--~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvI 99 (571)
T 1f0x_A 23 SHLLTDPAKTARYRKGFRS-GQGDALAVVFPGSLLELWRVLKAC--VTADKIILMQAANTGLTEGSTPNGNDYDRDVVII 99 (571)
T ss_dssp GGEECCHHHHHHHHBCSSS-CBBCCSEEECCSSHHHHHHHHHHH--HHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEE
T ss_pred CeEEcCHHHHHHHhccccc-cCCCccEEEeeCCHHHHHHHHHHH--HHcCCCEEEECCCcCCCCCccCCCcCCcCceEEE
Confidence 5788898888999999985 788999999999999999999999 799999999999999998877643 8999
Q ss_pred EcCCCcCcCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCccccCC--CCCCccccccccccccCCCCCcCCCc
Q 044784 80 QMNSLNRFRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWT--DYLYPTVGGTLSNAGISGHTYQKGPQ 157 (482)
Q Consensus 80 dl~~~~~~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~--~~~~~tvGG~~~~~g~g~~~~~~G~~ 157 (482)
||++|| +++++|++ ++++||||+++.+|.++|.++|+.++..+ ++..+||||++++|++|..+.+||.+
T Consensus 100 dl~rmn-----~I~~id~~----~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~ 170 (571)
T 1f0x_A 100 STLRLD-----KLHVLGKG----EQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAY 170 (571)
T ss_dssp ECTTCC-----CEEEETTT----TEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSC
T ss_pred ECcccC-----CceeECCC----CeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCch
Confidence 999999 47799965 78999999999999999999999754333 23457999999999999999999999
Q ss_pred cc----------------cEEEEEEEecCCeEEEecC-----------------CCCc-----------------hhHHh
Q 044784 158 IT----------------NVLELDVLTGKGEFVTCSP-----------------QKDS-----------------ELFYA 187 (482)
Q Consensus 158 ~d----------------~v~~~~vv~~~G~~~~~~~-----------------~~~~-----------------dl~~~ 187 (482)
.| +|++++||++||++++++. ..++ ||+|+
T Consensus 171 ~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l 250 (571)
T 1f0x_A 171 TEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRL 250 (571)
T ss_dssp CSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGC
T ss_pred hhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHH
Confidence 99 9999999999999998752 2234 99998
Q ss_pred H--hcCCCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHHHHHHHHHhcCCCCCCCCCCcccceEeecC-CC-------
Q 044784 188 V--LGGLGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFSTDQETLISTTGPSDKVMPDFLEGHLLMNQ-SP------- 257 (482)
Q Consensus 188 ~--~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~l~~~~~~~~-~~------- 257 (482)
+ +||+|+||| |+++||++|.|+....+.+.|++++++.+.+..+....+..|. ++|++|...+-.. ..
T Consensus 251 ~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~-a~E~~d~~~~~~~~~~~~~~~~~ 328 (571)
T 1f0x_A 251 FESSGCAGKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPV-AGEYMHRDIYDIAEKYGKDTFLM 328 (571)
T ss_dssp CSSTTCTTSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHHHHCSSCCS-EEEEEEHHHHHHHC---------
T ss_pred HHhcCCCCceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHhCCCCce-EEEEECHHHHHHHHHhccccccc
Confidence 8 999999999 9999999999998878888999999999999998853355565 6788876533100 00
Q ss_pred --------C-----------------C----------------cCCcccchhhhccccccceEEEEEEEEEeCCCcc--h
Q 044784 258 --------L-----------------D----------------FYPQSQRRKITFLVNQYGILYIIEVVTYYDNKNE--A 294 (482)
Q Consensus 258 --------~-----------------~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 294 (482)
. . +++...+.++..+.......++++ +.+...+ .
T Consensus 329 i~~~~~~~~p~~~~~k~~~~~~~~~~p~l~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~llve---~~g~~~~~~~ 405 (571)
T 1f0x_A 329 IDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLK---MAGDGVGEAK 405 (571)
T ss_dssp ------------------------------------------------CCHHHHHHHHHCSEEEEEE---ECTTHHHHHH
T ss_pred ccccCcccccchhcccchhhhhhcccccccccchhhhhhhhhhccccccchhhhcccccCceEEEEE---EecCcHHHHH
Confidence 0 0 000100011111121122433333 3343321 2
Q ss_pred HHHHHHHhccccCCCCcccc--ccchHHHHhhhhhHHHH-HHHHccCCC-C-CccccccccccchhhhhhHHHHHHHhhc
Q 044784 295 KKVKQMLKSLKGFLPGFVFE--KDVTYLQFLNRVHDQEI-ELRKKGLWD-I-PHPWLNIFIPKSRITDFDNGVFRNILLK 369 (482)
Q Consensus 295 ~~~~~ll~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~w~-~-r~~~~~~~vp~~~~~~~~~~~~~~l~~~ 369 (482)
+.++++++... +.... ....-..+..+...... ..-+...+. . .....++.+|.++++++ +++ ....+.
T Consensus 406 ~~l~~~~~~~~----g~~~~~~~~~~~~~~~~R~~~~~~~~~~r~~~~~~~g~~~~~Dvavp~~~l~~~-~~~-~~~l~~ 479 (571)
T 1f0x_A 406 SWLVDYFKQAE----GDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWY-EHL-PPEIDS 479 (571)
T ss_dssp HHHHHHHHHSS----CEEEECCHHHHHHHHHHHTTHHHHHHHHHHHTTTTEEEEEEEEEECCTTCSCCS-CCC-CHHHHT
T ss_pred HHHHHHHHHcC----CCeeecCccHHHHHHHHhhhhhhHHHHhhhcchhhcCCceEEEEEecHHHhHHH-HHH-HHHHHh
Confidence 23344444331 11110 00001111112111100 011111111 0 11256889999999999 765 445431
Q ss_pred cCCCCceEEEEEccCCCCCcCcceeecc-CCceEEEEEeeCCCcchHHHHHHhhHHHHHHHHHcCccceecCCCCCChhh
Q 044784 370 RNFTSSTVLVYPLLRSKWDERMSAVIAA-EEEVFYFVGFLDASADNWEAFDNKNKDILQFCVNAGIKFKQYLGHHATKEE 448 (482)
Q Consensus 370 ~~~~~~~i~~~~~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~y~~~~~~~~~ 448 (482)
.......++|+ ++++|+.+.+.... . +.+...++.+.+.+.|+. ++..++.-.
T Consensus 480 -----------------~~~~~~~~GH~g~g~~H~~~~~~~~~--~---~~~i~~~~~~~v~~~GGs----isaEHGvG~ 533 (571)
T 1f0x_A 480 -----------------QLVHKLYYGHFMCYVFHQDYIVKKGV--D---VHALKEQMLELLQQRGAQ----YPAEHNVGH 533 (571)
T ss_dssp -----------------TEEEEEEEEETTTTEEEEEEEEETTC--C---HHHHHHHHHHHHHHTTCB----SCSSSCCTT
T ss_pred -----------------hCccceeEEEEcCCceEEeeecCCch--h---HHHHHHHHHHHHHHcCCe----EEeeccCCc
Confidence 11123457787 89999987774321 1 245666777777876554 223333221
Q ss_pred HHHhhccchhHHHHhhhcCCCCCCCCCCCcCCC
Q 044784 449 WIIHFGSKWNTFQQRKTRFDPRMILSPGQRIFN 481 (482)
Q Consensus 449 ~~~~yG~~~~~L~~iK~~~DP~nifnpgk~i~~ 481 (482)
. |++... |++||+.|||+|||||||.+.+
T Consensus 534 ~---~~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 534 L---YKAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp T---SCCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred c---cCCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 1 565444 9999999999999999999854
No 19
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=3e-36 Score=309.35 Aligned_cols=205 Identities=24% Similarity=0.249 Sum_probs=181.7
Q ss_pred HHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccC--CCeEEEEcCCCCCCCCccCCCcEEEEcCCCcCcCCCceE
Q 044784 16 KLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLF--SYTIAAKGQAHSTWGQAQANDGVVVQMNSLNRFRNGTGI 93 (482)
Q Consensus 16 ~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~--~~~~~~~g~g~~~~~~~~~~~~vvidl~~~~~~~~~~~i 93 (482)
....++|++ +...|..|++|.|++||+++|++| +++ ++|++++|+|||+.+.+...+|++|||++|| +++
T Consensus 30 ~~~~~~W~~-~~~~p~~vv~P~s~eev~~~v~~a--~~~~~~~~v~~~G~G~s~~~~~~~~~gvvIdl~~l~-----~i~ 101 (481)
T 4feh_A 30 ATRLTGWGR-TAPSVANVLRTPDAEMIVKAVARV--AESGGGRGAIARGLGRSYGDNAQNGGGLVIDMTPLN-----TIH 101 (481)
T ss_dssp EEEECCTTC-CSCEEEEEEECSCHHHHHHHHHHH--HTTTCTTCEEEECSSCSSSSTTCCTTSEEEECTTCC-----CEE
T ss_pred cceeecccC-CCCCCCEEEeCCCHHHHHHHHHHH--HHcCCCceEEEEeCCcCCCCCCCCcCeEEEECccCC-----Cce
Confidence 345689976 688999999999999999999999 677 7999999999999877665689999999999 477
Q ss_pred EEcCCCCCccEEEEcccccHHHHHHHHHhCCCccccCCCCCCccccccccccccCCCCCcCCCccccEEEEEEEecCCeE
Q 044784 94 LISGDRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVLELDVLTGKGEF 173 (482)
Q Consensus 94 ~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~vv~~~G~~ 173 (482)
++|++ .++|+||||+++.+|.++|.++|+.++..++...+||||++++|++|..+..||.++|+|+++++|++||++
T Consensus 102 ~~d~~---~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v 178 (481)
T 4feh_A 102 SIDAD---TKLVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEI 178 (481)
T ss_dssp EEETT---TTEEEEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCE
T ss_pred EEcCC---CCEEEEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCE
Confidence 99998 489999999999999999999999988878888899999999998887779999999999999999999999
Q ss_pred EEecCC-CCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEE-EEEeCChhhHHHHHHH
Q 044784 174 VTCSPQ-KDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWL-RILYSDFSSFSTDQET 231 (482)
Q Consensus 174 ~~~~~~-~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 231 (482)
++++++ +++||||+++|+.|++||||+++|++.|.++..... .+.+.+++++++.+++
T Consensus 179 ~~~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~ 238 (481)
T 4feh_A 179 RHLTPTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSD 238 (481)
T ss_dssp EEECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSS
T ss_pred EEeCCCCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHH
Confidence 999998 899999999999999999999999999998753322 4567777766665543
No 20
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=7.3e-38 Score=318.78 Aligned_cols=198 Identities=20% Similarity=0.288 Sum_probs=176.7
Q ss_pred hhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC-CCcEEEEcCCCcCcCCCceEEEcC
Q 044784 19 SIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA-NDGVVVQMNSLNRFRNGTGILISG 97 (482)
Q Consensus 19 ~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~-~~~vvidl~~~~~~~~~~~i~~~~ 97 (482)
.++|+..+...|..|++|+|++||+++|++| +|++++|||||+.+.+.+ .+|++|||++|| +++++|+
T Consensus 10 ~~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a------~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~-----~i~~~d~ 78 (422)
T 2vfr_A 10 VTNWAGNITYTAKELLRPHSLDALRALVADS------ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLP-----SVVDVDT 78 (422)
T ss_dssp CBCSSSSCBCSCSSCBCCSSHHHHHHHHHHC------SSEEECSSCCCCSSTTCCCTTCEEECSTTSC-----CCEEEET
T ss_pred eecCCCCccCCCCEEEeCCCHHHHHHHHHhC------CCEEEEECCCCCCCCccCCCCcEEEEhhhCC-----CcEEEcC
Confidence 5789888889999999999999999999976 699999999999987763 579999999999 4789999
Q ss_pred CCCCccEEEEcccccHHHHHHHHHhCCCccccCCCCCCccccccccccccCCCCCcCCCccccEEEEEEEecCCeEEEec
Q 044784 98 DRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVLELDVLTGKGEFVTCS 177 (482)
Q Consensus 98 ~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~ 177 (482)
+ .++++||||+++.+|.++|.++|+.++..++.+.+||||++++|++|.. .+||.++|+|+++++|++||++++++
T Consensus 79 ~---~~~v~v~aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~ 154 (422)
T 2vfr_A 79 A---ARTVRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIA 154 (422)
T ss_dssp T---TTEEEEETTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEE
T ss_pred C---CCEEEEcCCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeC
Confidence 8 4899999999999999999999999888788888999999999887754 79999999999999999999999999
Q ss_pred CCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHH-HHHHHHHh
Q 044784 178 PQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFS-TDQETLIS 234 (482)
Q Consensus 178 ~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 234 (482)
+++++ ||+++|++|++||||+++||+.|.++....... +.+++++. +.+.++..
T Consensus 155 ~~~~~--f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 209 (422)
T 2vfr_A 155 RGDER--FGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFT-ELPLAGLDPATFETVMA 209 (422)
T ss_dssp TTSTT--GGGTSSCTTTTCEEEEEEEECEECCEEEEEEEE-EECSTTCCHHHHHHHHT
T ss_pred CCCCC--cceEEecCCCCEEEEEEEEEEEecCceEEEEEe-cCCHHHHHHHHHHHHHh
Confidence 88776 899999999999999999999999986544433 66788888 87777764
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=2.1e-33 Score=287.73 Aligned_cols=187 Identities=17% Similarity=0.146 Sum_probs=159.0
Q ss_pred HHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCC-----CCccCCCcEEEEcC-CCcCc
Q 044784 14 AIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTW-----GQAQANDGVVVQMN-SLNRF 87 (482)
Q Consensus 14 ~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~-----~~~~~~~~vvidl~-~~~~~ 87 (482)
.|....++|+..+...|.+|++|.|++||+++|++| +++++|++++|+|||+. +.....+|++|||+ +||
T Consensus 14 ~y~~~~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A--~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln-- 89 (540)
T 3js8_A 14 LYKQSFKNWAGDIKVDDVWTCAPRSADEVVKVANWA--KDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLT-- 89 (540)
T ss_dssp CEEEEEECTTSCCEEEEEEEECCSSHHHHHHHHHHH--HHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCC--
T ss_pred hhcceeeccccccCCCccEEEEcCCHHHHHHHHHHH--HHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCC--
Confidence 455567899998889999999999999999999999 79999999999999996 22222478999996 698
Q ss_pred CCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCccccCCCCCCccccccccccccCCC----------CCcCCCc
Q 044784 88 RNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWTDYLYPTVGGTLSNAGISGH----------TYQKGPQ 157 (482)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~----------~~~~G~~ 157 (482)
.|++|+++ ...+|+||||+++.+|.++|.++|+.++..++.+.+||||++++|++|.. +.+||.+
T Consensus 90 ----~I~vD~~~-~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~ 164 (540)
T 3js8_A 90 ----AMSIDASG-PVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSI 164 (540)
T ss_dssp ----CEEEECSS-SSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCG
T ss_pred ----CEEECCCC-CccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccH
Confidence 35998740 02799999999999999999999999877777777999999998876664 5799999
Q ss_pred cccEEEEEEEecCCe-----EEEecCCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCce
Q 044784 158 ITNVLELDVLTGKGE-----FVTCSPQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRV 212 (482)
Q Consensus 158 ~d~v~~~~vv~~~G~-----~~~~~~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~ 212 (482)
+|+|++++||++||+ ++++++ +++||+++ +++.|+ ||||++|||++|.++..
T Consensus 165 ~D~V~~levV~adG~~~~~~i~~~s~-~~~DL~a~-r~G~G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 165 SNLVLSLTAVVYDKASGAYALRKFAR-NDPQIAPL-LAHVGR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEET-TSGGGHHH-HTCTTS-SCEEEEEEEEEECCEEE
T ss_pred HHhEEEEEEEcCCCCCceeeEEEeCC-CChhHHHH-HhcCCC-eEEEEEEEEEEECCceE
Confidence 999999999999998 888886 68998555 555577 59999999999998854
No 22
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=100.00 E-value=5.8e-33 Score=291.03 Aligned_cols=201 Identities=15% Similarity=0.123 Sum_probs=170.2
Q ss_pred ChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCcc-----CCCcEEEEc-CCC
Q 044784 11 DPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQ-----ANDGVVVQM-NSL 84 (482)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~-----~~~~vvidl-~~~ 84 (482)
+.+.|....++|+..+...|..|++|+|++||+++|++| +++++|++++|+|||+.+.+. +.+|++||| ++|
T Consensus 17 ~~~~y~~~~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a--~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l 94 (561)
T 2i0k_A 17 DIALFQQAYQNWSKEIMLDATWVCSPKTPQDVVRLANWA--HEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHL 94 (561)
T ss_dssp TSCCEEEEEECTTSSSEEEEEEEECCSSHHHHHHHHHHH--HHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTS
T ss_pred CCHhHHHHHhhhhhccCCCCCEEEecCCHHHHHHHHHHH--HHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhC
Confidence 456677788999988889999999999999999999999 789999999999999865332 235799999 899
Q ss_pred cCcCCCceEEEcC--CCCCccEEEEcccccHHHHHHHHHhCCCccccCCCCCCccccccccccccCCC----------CC
Q 044784 85 NRFRNGTGILISG--DRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWTDYLYPTVGGTLSNAGISGH----------TY 152 (482)
Q Consensus 85 ~~~~~~~~i~~~~--~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~----------~~ 152 (482)
| .|++|+ + .++|+||||+++.+|.++|.++|+.++..++.+.+||||++++|++|.. +.
T Consensus 95 ~------~i~vd~~~~---~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~ 165 (561)
T 2i0k_A 95 N------GITVNTGGP---VATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGH 165 (561)
T ss_dssp C------CEEEECCSS---SCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTC
T ss_pred C------ceEecCcCC---ccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCccccccc
Confidence 8 359998 6 4899999999999999999999999888888888999999998877765 77
Q ss_pred cCCCccccEEEEEEEecCCe---EEEecCCCCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCChhhHH
Q 044784 153 QKGPQITNVLELDVLTGKGE---FVTCSPQKDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSDFSSFS 226 (482)
Q Consensus 153 ~~G~~~d~v~~~~vv~~~G~---~~~~~~~~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (482)
+||.++|+|+++++|++||+ +++++++ ++||+|+++|. |. ||||++|||+.|.++........++ +++++
T Consensus 166 ~~G~~~d~V~~~evV~~dG~~~~~~~~~~~-~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~~~~~~~~~-~~~~l 238 (561)
T 2i0k_A 166 TYGSLSNLVTELTAVVWNGTTYALETYQRN-DPRITPLLTNL-GR-CFLTSVTMQAGPNFRQRCQSYTDIP-WRELF 238 (561)
T ss_dssp CSSCGGGGEEEEEEEEECSSSEEEEEEETT-SGGGHHHHSCT-TS-SCEEEEEEECEECCEEEEEEECCSC-HHHHT
T ss_pred ccccHhheEEEEEEEeCCCCEEEeeeccCC-CccHHHHHhcC-CC-EEEEEEEEEEEECCceEEEEEEccC-HHHHH
Confidence 89999999999999999999 8888765 78999988844 55 8999999999999986443333233 44433
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=1.2e-26 Score=225.24 Aligned_cols=175 Identities=16% Similarity=0.143 Sum_probs=143.1
Q ss_pred CeecChhHHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccCCCcEEEEcCCCcC
Q 044784 7 NLRTDPGAIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQANDGVVVQMNSLNR 86 (482)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~~~~vvidl~~~~~ 86 (482)
+|.+| ..+..|.+ .+ +.+.|.++++|.|++||+++|++| +++++|++++|+|||+.+.+...+|++|||++|+
T Consensus 36 ~v~~~-~~l~~~tt--~~-igg~p~~vv~P~s~eev~~~v~~a--~~~~~pv~v~GgGsnl~~~~~~~~gvvI~l~~~~- 108 (322)
T 3tx1_A 36 AIKLN-EPLSKYTY--TK-TGGAADVFVMPKTIEEAQEVVAYC--HQNKIPLTILGNGSNLIIKDGGIRGVILHLDLLQ- 108 (322)
T ss_dssp EEEEE-EEGGGGST--TS-CCCEEEEEEECSSHHHHHHHHHHH--HHTTCCEEEESCCTTEEECTTCEEEEEEECTTCC-
T ss_pred ceEcC-cchHHhcc--CC-cCceeeEEEEeCCHHHHHHHHHHH--HHcCCcEEEECCccCCCcCCCCCCeEEEECCCCC-
Confidence 45555 33444432 23 678899999999999999999999 7999999999999999866544479999999998
Q ss_pred cCCCceEEEcCCCCCccEEEEcccccHHHHHHHHHhCCCc----cccCCCCCCccccccccccccCCCCCcC-CCccccE
Q 044784 87 FRNGTGILISGDRSSGFYADVGGEQLWIDVLNATLTRGLS----PVSWTDYLYPTVGGTLSNAGISGHTYQK-GPQITNV 161 (482)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~----~~~~~~~~~~tvGG~~~~~g~g~~~~~~-G~~~d~v 161 (482)
.|.+|. .+++|+||++|.+|.++|.++|+. +...| .||||++++|+.+ | |.+.|+|
T Consensus 109 -----~I~~d~-----~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giP----gTVGGav~~NaGg-----yGg~~~d~v 169 (322)
T 3tx1_A 109 -----TIERNN-----TQIVAMSGAKLIDTAKFALNESLSGLEFACGIP----GSIGGALHMNAGA-----YGGEISDVL 169 (322)
T ss_dssp -----CEEEET-----TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCC----SBHHHHHHHTCEE-----TTEEHHHHE
T ss_pred -----cEEECC-----CEEEEecCcCHHHHHHHHHHcCCcccccCCCCc----chhHHHHHhCccC-----cccchHhhE
Confidence 456754 489999999999999999999995 44444 4999999977533 4 6899999
Q ss_pred EEEEEEecCCeEEEecCCCCchhHHhHhcCC-C-CcEEEEEEEEEEeecCC
Q 044784 162 LELDVLTGKGEFVTCSPQKDSELFYAVLGGL-G-QFGIITRARIVLGPAKK 210 (482)
Q Consensus 162 ~~~~vv~~~G~~~~~~~~~~~dl~~~~~g~~-g-~~Giit~~~~~~~~~~~ 210 (482)
+++++|++||+++++++ +|++|++|++. | ..||||+++|||.|.|+
T Consensus 170 ~~vevV~~~G~i~~~~~---~~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 170 EAATVLTQTGELKKLKR---SELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp EEEEEECTTSCEEEEEG---GGCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred EEEEEEcCCCCEEEech---HHcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 99999999999999976 68999999874 3 57899999999999875
No 24
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.93 E-value=5.6e-26 Score=222.05 Aligned_cols=156 Identities=15% Similarity=0.147 Sum_probs=136.4
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccCCCcEEEEcCCCcCcCCCceEEEcCCCCCccEE
Q 044784 26 IKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQANDGVVVQMNSLNRFRNGTGILISGDRSSGFYA 105 (482)
Q Consensus 26 ~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~ 105 (482)
+...|.+|++|.|++||+++|++| +++++|++++|||||+.+.+.+.+|++|||++|| .|++|. .++
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a--~~~~~pv~~~GgGtnl~~~~~~~~gvvI~l~~m~------~i~id~-----~~v 111 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYA--YQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLD------HIEVSD-----DAI 111 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHH--HHTTCCEEEESSCSSEEECTTCEEEEEEECTTCC------CEEEET-----TEE
T ss_pred cCCcceEEEEcCCHHHHHHHHHHH--HHcCCCEEEECCCCccccCCCCCCeEEEEeCCCC------ceEEcC-----CEE
Confidence 567899999999999999999999 7999999999999999866654469999999998 458873 489
Q ss_pred EEcccccHHHHHHHHHhCCC----ccccCCCCCCccccccccccccCCCCCcCC-CccccEEEEEEEecCCeEEEecCCC
Q 044784 106 DVGGEQLWIDVLNATLTRGL----SPVSWTDYLYPTVGGTLSNAGISGHTYQKG-PQITNVLELDVLTGKGEFVTCSPQK 180 (482)
Q Consensus 106 ~v~aG~~~~~l~~~l~~~g~----~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G-~~~d~v~~~~vv~~~G~~~~~~~~~ 180 (482)
+||||++|.+|.++|.++|+ .++..|+ ||||++++|+.+ || .++|+|+++++|++||++++++..
T Consensus 112 ~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pg----tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~~- 181 (326)
T 1hsk_A 112 IAGSGAAIIDVSRVARDYALTGLEFACGIPG----SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTTK- 181 (326)
T ss_dssp EEETTSBHHHHHHHHHHTTEESCGGGTTCCS----BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEETT-
T ss_pred EEeCCCcHHHHHHHHHHCCCccccccCCCcc----hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEEChH-
Confidence 99999999999999999999 5555554 999999987544 88 999999999999999999999874
Q ss_pred CchhHHhHhcC----CCCcEEEEEEEEEEeec
Q 044784 181 DSELFYAVLGG----LGQFGIITRARIVLGPA 208 (482)
Q Consensus 181 ~~dl~~~~~g~----~g~~Giit~~~~~~~~~ 208 (482)
+++|+++.+ +| ||||+++||++|.
T Consensus 182 --~~~~gyr~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 182 --ELELDYRNSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp --TTTCBTTBCHHHHTT--CEEEEEEEECEEC
T ss_pred --HcCCCccccccCCCC--EEEEEEEEEEEcC
Confidence 677877763 45 9999999999998
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=1e-24 Score=213.63 Aligned_cols=164 Identities=16% Similarity=0.132 Sum_probs=141.4
Q ss_pred hcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccCCCcEEEEcCCCcCcCCCceEEEcC--C
Q 044784 21 DYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQANDGVVVQMNSLNRFRNGTGILISG--D 98 (482)
Q Consensus 21 ~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~~~~vvidl~~~~~~~~~~~i~~~~--~ 98 (482)
++.+ +.+.|..+++|.|++||+++|++| +++++|++++|+|||+.+.+. .+|+||+++ |+ .|++++ +
T Consensus 23 tt~~-igg~a~~vv~p~s~eel~~~v~~a--~~~~ipv~vlGgGSNll~~d~-~~GvVI~l~-~~------~i~v~~~~~ 91 (357)
T 3i99_A 23 HTFG-IEQLAAQLVVAESIDDLKALYCSA--EWASLPKLIIGKGSNMLFTCH-YTGMIVVNR-LN------GIEHQQDDD 91 (357)
T ss_dssp STTC-CSCEEEEEEEECSHHHHHHHHSSS--TTTTSCEEEESSCTTEEECSC-EEEEEEEEC-CC------CEEEEECSS
T ss_pred ccCC-CCccceEEEEECCHHHHHHHHHHH--HHcCCCEEEECCCcCcccCCC-CCeEEEEcC-CC------ceEEeccCC
Confidence 4444 778899999999999999999999 899999999999999986665 579999998 97 456643 3
Q ss_pred CCCccEEEEcccccHHHHHHHHHhCCCc----cccCCCCCCccccccccccccCCCCCcCCC-ccccEEEEEEEec-CCe
Q 044784 99 RSSGFYADVGGEQLWIDVLNATLTRGLS----PVSWTDYLYPTVGGTLSNAGISGHTYQKGP-QITNVLELDVLTG-KGE 172 (482)
Q Consensus 99 ~~~~~~~~v~aG~~~~~l~~~l~~~g~~----~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~-~~d~v~~~~vv~~-~G~ 172 (482)
..+++|+||++|.+|.+++.++||. +..+| .||||++.+|. ..||. +.|+|+++++|++ +|+
T Consensus 92 ---~~~v~v~AG~~~~~l~~~a~~~Gl~GlE~l~gIP----GtVGGav~~Na-----GaYG~e~~d~v~~vevv~~~~G~ 159 (357)
T 3i99_A 92 ---YHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIP----GCAGSAPIQNI-----GAYGVEFKDVCDYVEYLCLETGT 159 (357)
T ss_dssp ---EEEEEEETTSBHHHHHHHHHHTTCTTCGGGTTCC----SBGGGTTTTTC-----EETTEEGGGTEEEEEEEETTTTE
T ss_pred ---ceEEEEeCCCcHHHHHHHHHHcCCcCccccCCCC----chhHHHHHhch-----hhhhhhHHhhEeEEEEEECCCCc
Confidence 4789999999999999999999997 34444 39999999763 26886 9999999999998 999
Q ss_pred EEEecCCCCchhHHhHhcCC-----CCcEEEEEEEEEEeecCC
Q 044784 173 FVTCSPQKDSELFYAVLGGL-----GQFGIITRARIVLGPAKK 210 (482)
Q Consensus 173 ~~~~~~~~~~dl~~~~~g~~-----g~~Giit~~~~~~~~~~~ 210 (482)
++++++ .|++|++|++. |++||||+++|||+|.+.
T Consensus 160 i~~~~~---~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 160 VKRLTM---EECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp EEEEET---GGGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred EEEEeH---HHcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 999986 59999999874 489999999999999875
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=1.3e-23 Score=205.29 Aligned_cols=165 Identities=12% Similarity=0.097 Sum_probs=139.3
Q ss_pred hcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccCCCcEEEEcCCCcCcCCCceEEEcCCCC
Q 044784 21 DYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQANDGVVVQMNSLNRFRNGTGILISGDRS 100 (482)
Q Consensus 21 ~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~~~~vvidl~~~~~~~~~~~i~~~~~~~ 100 (482)
++.+ +.+.|..+++|.|++||+++|++| +++++|++++|||||+.+.+. .+|+||+++ |++ +..++.+
T Consensus 7 tt~~-igg~a~~~v~p~s~eel~~~l~~a--~~~~~pv~vlGgGSnll~~d~-~~GvVI~l~-~~~-----i~~i~~~-- 74 (340)
T 1uxy_A 7 NTFG-IDHNAQHIVCAEDEQQLLNAWQYA--TAEGQPVLILGEGSNVLFLED-YRGTVIINR-IKG-----IEIHDEP-- 74 (340)
T ss_dssp STTC-CCCBEEEEEEESSHHHHHHHHHHH--HHTTCCEEEESSCTTEEECSC-EEEEEEEEC-CCC-----EEEEECS--
T ss_pred ccCC-CCccccEEEEeCCHHHHHHHHHHH--HHcCCCEEEECCCcCCcccCC-CCeEEEEcc-CCC-----cEEEecC--
Confidence 4444 667899999999999999999999 799999999999999986654 479999997 873 4556655
Q ss_pred Cc-cEEEEcccccHHHHHHHHHhCCCc----cccCCCCCCccccccccccccCCCCCcCCC-ccccEEEEEEEec-CCeE
Q 044784 101 SG-FYADVGGEQLWIDVLNATLTRGLS----PVSWTDYLYPTVGGTLSNAGISGHTYQKGP-QITNVLELDVLTG-KGEF 173 (482)
Q Consensus 101 ~~-~~~~v~aG~~~~~l~~~l~~~g~~----~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~-~~d~v~~~~vv~~-~G~~ 173 (482)
. .+++|+||++|.+|.+++.++|+. +..+| .||||++.+|. | .||. ++|+|.++++|++ +|++
T Consensus 75 -~~~~v~vgAG~~~~~l~~~~~~~Gl~Gle~~~gIP----GtVGGa~~~Na-G----ayG~ei~d~v~~v~vv~~~~G~v 144 (340)
T 1uxy_A 75 -DAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIP----GCVGSSPIQNI-G----AYGVELQRVCAYVDSVELATGKQ 144 (340)
T ss_dssp -SEEEEEEETTSBHHHHHHHHHHTTCCSCGGGTTCC----SBGGGTTTTTC-E----ETTEEGGGTEEEEEEEETTTTEE
T ss_pred -CCeEEEEecCCCHHHHHHHHHHCCCCccccccCCc----cchhHHHHhcc-c----cchhhHHhheeEEEEEECCCCcE
Confidence 3 589999999999999999999996 33333 49999999763 2 3784 9999999999996 9999
Q ss_pred EEecCCCCchhHHhHhcCC-----CCcEEEEEEEEEEeecCC
Q 044784 174 VTCSPQKDSELFYAVLGGL-----GQFGIITRARIVLGPAKK 210 (482)
Q Consensus 174 ~~~~~~~~~dl~~~~~g~~-----g~~Giit~~~~~~~~~~~ 210 (482)
++++. .|++|++|.+. +++||||+++|++.|.+.
T Consensus 145 ~~~~~---~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 145 VRLTA---KECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp EEEET---GGGTCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred EEEeH---HHhccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 99986 69999999874 369999999999999874
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.86 E-value=6.3e-22 Score=186.64 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=132.1
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccCCC-cEEEEcCCCcCcCCCceEEEcCCCCCccE
Q 044784 26 IKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQAND-GVVVQMNSLNRFRNGTGILISGDRSSGFY 104 (482)
Q Consensus 26 ~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~~~-~vvidl~~~~~~~~~~~i~~~~~~~~~~~ 104 (482)
+.+.|. +++|+|++||+++| ++|++++|+|||+.+.+.+.+ |+||++++|+ .|++ + .
T Consensus 19 igg~a~-vv~p~s~edv~~~v--------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~------~I~v--d----~- 76 (268)
T 2gqt_A 19 VGGPAE-LWTVETREELKRAT--------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQ------TYDL--K----G- 76 (268)
T ss_dssp CCCEEE-EEEECSHHHHHHHT--------TSCEEECSSSSSEEECTTCCSSEEEEECGGGG------CBCT--T----S-
T ss_pred cCcceE-EEEeCCHHHHHHHh--------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCC------CcEE--c----C-
Confidence 566778 99999999999988 589999999999997776544 9999999998 3444 3 2
Q ss_pred EEEcccccHHHHHHHHHhCCCccccCCCCCCccccccccccccCCCCCcCC-CccccEEEEEEEecCCeEEEecCCCCch
Q 044784 105 ADVGGEQLWIDVLNATLTRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKG-PQITNVLELDVLTGKGEFVTCSPQKDSE 183 (482)
Q Consensus 105 ~~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G-~~~d~v~~~~vv~~~G~~~~~~~~~~~d 183 (482)
+|+||++|.+|.+++.++|+.+....+....||||++.+|+. .|| .+.|+|+++++| +||+++++++ .|
T Consensus 77 -~v~aG~~~~~l~~~~~~~Gl~Gle~~~giPGtvGGav~~NaG-----ayG~e~~d~v~~v~vv-~~G~v~~~~~---~~ 146 (268)
T 2gqt_A 77 -WVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAG-----TRFGEMADALEAVEVF-HDGAFHVYCP---EE 146 (268)
T ss_dssp -EEETTSBHHHHHHHHHHTTEESCGGGTTCCCBHHHHHHTTCE-----ETTEEGGGGEEEEEEE-ETTEEEEECG---GG
T ss_pred -EEECCCCHHHHHHHHHHcCCcCCccccCccchhHHHHHhccc-----cCchhHHhheeEEEEE-CCCcEEEEch---HH
Confidence 899999999999999999996222221122399999998732 488 699999999999 9999999986 58
Q ss_pred hHHhHhcCCCC-cEEEEEEEEEEeecCCceEEEEEEeCChhhHHHHHHHHHh
Q 044784 184 LFYAVLGGLGQ-FGIITRARIVLGPAKKRVKWLRILYSDFSSFSTDQETLIS 234 (482)
Q Consensus 184 l~~~~~g~~g~-~Giit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (482)
++|++|++.-. -||||+++|||+|.+ +.++++.++.+.++++
T Consensus 147 l~~~YR~s~~~~~gIVt~~~~~L~~~~---------~~~i~~~~~~v~~~R~ 189 (268)
T 2gqt_A 147 LGFGYRKSHLPPGGIVTRVRLKLKERP---------KEEILRRMAEVDRARK 189 (268)
T ss_dssp SCCBTTBCCCSTTCEEEEEEECCEECC---------HHHHHHHHHHHHHHTT
T ss_pred cccccCCCCcCCCceEEEEEEEEEeCC---------HHHHHHHHHHHHHHHH
Confidence 99999998511 149999999999984 3345444454444443
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.85 E-value=2.7e-21 Score=177.13 Aligned_cols=122 Identities=21% Similarity=0.212 Sum_probs=105.1
Q ss_pred EEEcCCCCCccEEEEcccccHHHHHHHHHhCCCccccCCCCCCccccccccccccCCCCCcCCCccccEEEEEEEecCCe
Q 044784 93 ILISGDRSSGFYADVGGEQLWIDVLNATLTRGLSPVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVLELDVLTGKGE 172 (482)
Q Consensus 93 i~~~~~~~~~~~~~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~vv~~~G~ 172 (482)
|++|++ ..+++||||+++.+|.++|.++|+.++..|+....||||++++|++| .+||.. |+|+++++|++||+
T Consensus 1 l~vd~~---~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAA---DQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETT---TTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCC---CCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 467888 48999999999999999999999997776653333999999998766 899999 99999999999999
Q ss_pred EEEecCC-----CCchhHHhHhcCCCCcEEEEEEEEEEeecCCceEEEEEEeCC
Q 044784 173 FVTCSPQ-----KDSELFYAVLGGLGQFGIITRARIVLGPAKKRVKWLRILYSD 221 (482)
Q Consensus 173 ~~~~~~~-----~~~dl~~~~~g~~g~~Giit~~~~~~~~~~~~~~~~~~~~~~ 221 (482)
+++++.+ .++|+||+++|++|+|||||+++||++|.++......+.+.+
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~~~~~ 127 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGS 127 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEECCSS
T ss_pred EEEECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEEecCC
Confidence 9999864 358999999999999999999999999999876555555543
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.59 E-value=1.8e-07 Score=89.24 Aligned_cols=151 Identities=16% Similarity=0.142 Sum_probs=103.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCC--cc-CCCcEEEEcCC---CcCcCCCceEEEcCCCCCc
Q 044784 29 KPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQ--AQ-ANDGVVVQMNS---LNRFRNGTGILISGDRSSG 102 (482)
Q Consensus 29 ~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~--~~-~~~~vvidl~~---~~~~~~~~~i~~~~~~~~~ 102 (482)
.+..+++|.|.+|+.++++.. +.+.++.||||++... .. ...+++||+++ |+ .|+.+.+
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~-----~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~------~i~~~~~---- 68 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL-----GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELR------GIREEGS---- 68 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH-----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGC------CEEEETT----
T ss_pred CcceEECCCCHHHHHHHHHhc-----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhc------ceEecCC----
Confidence 456789999999999998854 2579999999997532 21 23589999985 54 5776554
Q ss_pred cEEEEcccccHHHHHHH-HHhCCCc--------cccCCCCCCccccccccccccCCCCCcCCCccccEE-------EEEE
Q 044784 103 FYADVGGEQLWIDVLNA-TLTRGLS--------PVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVL-------ELDV 166 (482)
Q Consensus 103 ~~~~v~aG~~~~~l~~~-l~~~g~~--------~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~-------~~~v 166 (482)
.++++||+++.+|.+. +.+.++. ..+.+--+..||||++.++.. ..|.+. .+++
T Consensus 69 -~l~iGA~~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~ 138 (287)
T 1ffv_C 69 -TVVIGAMTVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVL 138 (287)
T ss_dssp -EEEEETTCBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEE
T ss_pred -EEEEccCCcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEE
Confidence 6999999999999962 3333332 122221124699999998731 345544 6899
Q ss_pred EecCCeEEEecCCCCchhHHhHhcC-CCCcEEEEEEEEEEeec
Q 044784 167 LTGKGEFVTCSPQKDSELFYAVLGG-LGQFGIITRARIVLGPA 208 (482)
Q Consensus 167 v~~~G~~~~~~~~~~~dl~~~~~g~-~g~~Giit~~~~~~~~~ 208 (482)
..++| ..+... .|+|...+-+ ...-.|||+++|.+.+.
T Consensus 139 ~~~~G-~r~i~~---~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 139 EGPNG-RRTVPA---DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EETTE-EEEEES---TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EcCCc-eEEEEH---HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 99999 455544 4777666532 12235999999987664
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.85 E-value=2.1e-05 Score=74.92 Aligned_cols=153 Identities=16% Similarity=0.199 Sum_probs=98.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCC---ccCCCcEEEEcCCCcCcCCCceEEEcCCCCCccEE
Q 044784 29 KPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQ---AQANDGVVVQMNSLNRFRNGTGILISGDRSSGFYA 105 (482)
Q Consensus 29 ~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~---~~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~ 105 (482)
.+..+++|.|.+|+.++++.. +-+.++.+|||++... .....+++||++++..+ +.|+.+.+ .+
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~-----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~~~-----~l 70 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL-----GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDL---VGIREEGT-----DV 70 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH-----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGG---SCEEEETT-----EE
T ss_pred CceEEECcCCHHHHHHHHHhc-----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhh---cceEecCC-----EE
Confidence 455789999999999998643 2358899999997531 11235899999874211 25676544 69
Q ss_pred EEcccccHHHHHH--HHHhCCCc-----cccCCC---CCCccccccccccccCCCCCcCCCccccEE-------EEEEEe
Q 044784 106 DVGGEQLWIDVLN--ATLTRGLS-----PVSWTD---YLYPTVGGTLSNAGISGHTYQKGPQITNVL-------ELDVLT 168 (482)
Q Consensus 106 ~v~aG~~~~~l~~--~l~~~g~~-----~~~~~~---~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~-------~~~vv~ 168 (482)
+++|++++.+|.+ .+.++ +. .....+ -+..||||++.++. ..+|.+. .+++..
T Consensus 71 ~IGA~~t~~~l~~~~~~~~~-~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~ 140 (288)
T 1n62_C 71 VIGAMTTQHALIGSDFLAAK-LPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTG 140 (288)
T ss_dssp EEETTCBHHHHHHCHHHHHH-CHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEE
T ss_pred EEccCCcHHHHhcChHHHHH-HHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEe
Confidence 9999999999994 44432 21 111111 11359999999862 2456655 777888
Q ss_pred cCCeEEEecCCCCchhHHhHhc-CCCCcEEEEEEEEEEeec
Q 044784 169 GKGEFVTCSPQKDSELFYAVLG-GLGQFGIITRARIVLGPA 208 (482)
Q Consensus 169 ~~G~~~~~~~~~~~dl~~~~~g-~~g~~Giit~~~~~~~~~ 208 (482)
++|+ .+..- .|+|...+- ....--|||++.|...+.
T Consensus 141 ~~G~-r~v~~---~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 141 PEGA-RIVAA---RDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp TTEE-EEEEH---HHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred CCcc-EEEEH---HHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 8884 44432 366555432 122335999999976553
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.82 E-value=2.1e-05 Score=79.69 Aligned_cols=152 Identities=10% Similarity=0.032 Sum_probs=101.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCC--c-cCCCcEEEEcCCCcCcCCCceEEEcCCCCCccEEEE
Q 044784 31 FAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQ--A-QANDGVVVQMNSLNRFRNGTGILISGDRSSGFYADV 107 (482)
Q Consensus 31 ~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~--~-~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~~v 107 (482)
...++|.|.+|+.++++.. . +.++.||||++... . ....+++||++++..+ +.|+.+.+ .+++
T Consensus 178 ~~y~~P~sl~ea~~ll~~~--~----~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~~~-----~l~I 243 (462)
T 2w3s_A 178 APAFLPETSDALADWYLAH--P----EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDL---AQIRETPD-----GYGI 243 (462)
T ss_dssp -CCBCCSSHHHHHHHHHHC--T----TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGG---SCEEEETT-----EEEE
T ss_pred cEEEecCCHHHHHHHHhhC--C----CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhh---CcEEEcCC-----EEEE
Confidence 3578999999999998743 1 57889999998743 1 2245799999984211 26777644 6999
Q ss_pred cccccHHHHHHHHHhCCCc--------cccCCCCCCccccccccccccCCCCCcCCCccccEE----EEEEEecCCeEEE
Q 044784 108 GGEQLWIDVLNATLTRGLS--------PVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVL----ELDVLTGKGEFVT 175 (482)
Q Consensus 108 ~aG~~~~~l~~~l~~~g~~--------~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~----~~~vv~~~G~~~~ 175 (482)
+||+++.+|.+.+. ..+. ..+.+--+..||||++.++. ..+.+...++ .+++..++|+ .+
T Consensus 244 GA~vtl~~l~~~l~-~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~s------p~sD~~~~L~ALdA~v~l~~~~G~-R~ 315 (462)
T 2w3s_A 244 GAGVTIAALRAFAE-GPHPALAGLLRRFASEQVRQVATIGGNIANGS------PIGDGPPALIAMGASLTLRRGQER-RR 315 (462)
T ss_dssp ETTCBHHHHHHHHT-TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTC------TTCSHHHHHHHTTCEEEEEBTTBC-CC
T ss_pred ccCCcHHHHHHHHH-HHhHHHHHHHHHhCChhheeeEEcccccccCC------CcchHHHHHHHcCCEEEEEeCCce-EE
Confidence 99999999998843 3332 11222122369999999864 2355666677 8888888883 33
Q ss_pred ecCCCCchhHHhHhcC-CCCcEEEEEEEEEEee
Q 044784 176 CSPQKDSELFYAVLGG-LGQFGIITRARIVLGP 207 (482)
Q Consensus 176 ~~~~~~~dl~~~~~g~-~g~~Giit~~~~~~~~ 207 (482)
... .|+|...+-. ...-.||++++|...+
T Consensus 316 vp~---~dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 316 MPL---EDFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp CBG---GGGEEETTEESCCTTCEEEEEEEESCC
T ss_pred EEH---HHhhcccccccCCCCcEEEEEEEecCC
Confidence 332 4666655432 1223499999987655
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=97.44 E-value=0.00023 Score=68.30 Aligned_cols=158 Identities=9% Similarity=0.022 Sum_probs=97.2
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCC---ccCCCcEEEEcCCCcCcCCCceEEEcCCCCCcc
Q 044784 27 KEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQ---AQANDGVVVQMNSLNRFRNGTGILISGDRSSGF 103 (482)
Q Consensus 27 ~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~---~~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~ 103 (482)
.+.+...++|.|.+|+.++++.. . ..++.+|||++... ......++||++++..+ +.|+.+.+
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~~----~--~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~~~----- 72 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQH----P--EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPEL---NAVEHGPE----- 72 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHHC----T--TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGG---GCEEECSS-----
T ss_pred cCCCeEEEccCCHHHHHHHHHhC----C--CCEEEECccHHHHHHhcCCCCCCEEEECCCChhh---cceEECCC-----
Confidence 45677899999999999987532 1 25788999998632 12235789999975321 25776543
Q ss_pred EEEEcccccHHHHHHHHHhC-------------CCc-----cccCCCCCCccccccccccccCCCCCcCCCccccEE---
Q 044784 104 YADVGGEQLWIDVLNATLTR-------------GLS-----PVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVL--- 162 (482)
Q Consensus 104 ~~~v~aG~~~~~l~~~l~~~-------------g~~-----~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~--- 162 (482)
.++++|++++.+|.+.+.++ .+. ..+..--+..||||++.++.. .+.+.--++
T Consensus 73 ~l~IGA~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~Ald 146 (305)
T 3nvz_B 73 GISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASG 146 (305)
T ss_dssp EEEEETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHT
T ss_pred eEEEccCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcC
Confidence 79999999999999876531 111 111111124699999998631 122222233
Q ss_pred -EEEEEecCCeEEEecCCCCchhHHhHhcC-CCCcEEEEEEEEEEee
Q 044784 163 -ELDVLTGKGEFVTCSPQKDSELFYAVLGG-LGQFGIITRARIVLGP 207 (482)
Q Consensus 163 -~~~vv~~~G~~~~~~~~~~~dl~~~~~g~-~g~~Giit~~~~~~~~ 207 (482)
.+++..++|+ .+..-. .|+|...+-. ...--|||++.+...+
T Consensus 147 A~v~l~~~~G~-R~vp~~--~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 147 TKLTIVSRGTR-RTVPMD--HTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp CEEEEEETTEE-EEEECC--GGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred CEEEEEcCCCc-EEEEee--hHhhcCcccccCCCCcEEEEEEecCCC
Confidence 6778888884 333321 1455433221 1222499999986543
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=97.20 E-value=0.00052 Score=65.19 Aligned_cols=151 Identities=13% Similarity=0.109 Sum_probs=94.9
Q ss_pred CccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCC---ccCCCcEEEEcCCCcCcCCCceEEEcCCCCCccEE
Q 044784 29 KPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQ---AQANDGVVVQMNSLNRFRNGTGILISGDRSSGFYA 105 (482)
Q Consensus 29 ~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~---~~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~ 105 (482)
.+..+++|.|.+|+.++++.- -...+.+|||++... .......+||++++..+ +.|+.+.+ .+
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~~------~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~~~-----~l 69 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLADD------PDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSEL---FEISQSAG-----IL 69 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHC------TTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGG---GCEEEETT-----EE
T ss_pred CCceEECCCCHHHHHHHHhhC------CCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhh---cCeEEcCC-----EE
Confidence 456789999999999988631 235778999996422 11234789999985311 25676544 69
Q ss_pred EEcccccHHHHHH--HHHhCC--Cc-----cccCCCCCCccccccccccccCCCCCcCCCccccEE-------EEEEEec
Q 044784 106 DVGGEQLWIDVLN--ATLTRG--LS-----PVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNVL-------ELDVLTG 169 (482)
Q Consensus 106 ~v~aG~~~~~l~~--~l~~~g--~~-----~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~-------~~~vv~~ 169 (482)
+++|++++.+|.+ .+.++- +. ..+..--+..|+||++.++. ..+|... .+++..+
T Consensus 70 ~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~ 140 (288)
T 1t3q_C 70 SVGAMVTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASS 140 (288)
T ss_dssp EEETTCBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEET
T ss_pred EEcCCCcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcC
Confidence 9999999999986 343221 11 11111223459999999752 2456665 7888888
Q ss_pred CCeEEEecCCCCchhHHhHhc-CCCCcEEEEEEEEEEe
Q 044784 170 KGEFVTCSPQKDSELFYAVLG-GLGQFGIITRARIVLG 206 (482)
Q Consensus 170 ~G~~~~~~~~~~~dl~~~~~g-~~g~~Giit~~~~~~~ 206 (482)
+|+ .+..- .|+|....- ....--|||++.|...
T Consensus 141 ~g~-R~vp~---~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 141 AGV-RSVSA---TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp TEE-EEEEH---HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred Cce-EEEEH---HHHhcCcccccCCCCCEEEEEEecCC
Confidence 885 33322 355544321 1223358999998654
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=96.79 E-value=0.0025 Score=60.74 Aligned_cols=151 Identities=16% Similarity=0.118 Sum_probs=89.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhccCCC-eEEEEcCCCCCCCCc---cCCCcEEEEcCCCcCcCCCceEEEcCCCCCccEE
Q 044784 30 PFAVLYPTSVDDIRTLIYLSYNSLFSY-TIAAKGQAHSTWGQA---QANDGVVVQMNSLNRFRNGTGILISGDRSSGFYA 105 (482)
Q Consensus 30 p~~vv~p~~~~ev~~~v~~a~~~~~~~-~~~~~g~g~~~~~~~---~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~ 105 (482)
+...++|.|.+|..++++.. +- .-.+.+|||++...- ......+||++++..+ +.|+.+. ..+
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~-----~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~~-----~~l 69 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQY-----KDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKEL---EYIRVEE-----NTI 69 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHT-----TTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGG---CCEEECS-----SEE
T ss_pred ceeEeCCCCHHHHHHHHHhC-----CCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhh---cceEEcC-----CeE
Confidence 45689999999999887632 22 467789999985311 1235789999986422 2566654 479
Q ss_pred EEcccccHHHHHHH--HHhC--CCc-----cccCCCCCCccccccccccccCCCCCcCCCccccE-------EEEEEEec
Q 044784 106 DVGGEQLWIDVLNA--TLTR--GLS-----PVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITNV-------LELDVLTG 169 (482)
Q Consensus 106 ~v~aG~~~~~l~~~--l~~~--g~~-----~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v-------~~~~vv~~ 169 (482)
+++|++++.+|.+. +.++ .+. ..+..--+..||||++.++. + .+|.. ..+++..+
T Consensus 70 ~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~--p-------~sD~~~~LlAldA~v~l~~~ 140 (296)
T 3hrd_C 70 HIGALSTFTQIENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSS--V-------AGDGVSAMTTLDATVVLESV 140 (296)
T ss_dssp EEETTCBHHHHHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTC--T-------TCHHHHHHHHTTCEEEEEET
T ss_pred EEccCCcHHHHHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCC--C-------chHHHHHHHHhCcEEEEEcC
Confidence 99999999999742 1111 000 11111112459999999752 1 33331 14556667
Q ss_pred CCeEEEecCCCCchhHHhHh----cCCCCcEEEEEEEEEEe
Q 044784 170 KGEFVTCSPQKDSELFYAVL----GGLGQFGIITRARIVLG 206 (482)
Q Consensus 170 ~G~~~~~~~~~~~dl~~~~~----g~~g~~Giit~~~~~~~ 206 (482)
+|+ .+..- .|+|.... -....--|||++.+...
T Consensus 141 ~g~-R~vp~---~dF~~g~~~~~~t~L~~~Eil~~I~iP~~ 177 (296)
T 3hrd_C 141 RGT-RQMKL---TDFFDGEGFKRRNALEADEIMTEVIIDRP 177 (296)
T ss_dssp TEE-EEEEH---HHHHHCCSSSSSSSCCTTCEEEEEEEECC
T ss_pred Cce-EEEEH---HHHhcccccccccCCCCCcEEEEEEecCC
Confidence 773 33322 25554332 11223349999998543
No 35
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=93.60 E-value=0.22 Score=56.87 Aligned_cols=151 Identities=10% Similarity=0.023 Sum_probs=90.2
Q ss_pred CCccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCc---cCCCcEEEEcCCCcCcCCCceEEEcCCCCCccE
Q 044784 28 EKPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQA---QANDGVVVQMNSLNRFRNGTGILISGDRSSGFY 104 (482)
Q Consensus 28 ~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~---~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~ 104 (482)
+.+...++|.|.+|+.++++.- . .-.+.+|||++.... .....++||++++..+ +.|+.+.+ .
T Consensus 231 ~~~~~~~~P~sl~ea~~ll~~~----~--~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL---~~I~~~~~-----~ 296 (1332)
T 3unc_A 231 GERVTWIQASTLKELLDLKAQH----P--EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPEL---NAVEHGPE-----G 296 (1332)
T ss_dssp CSSCEEEECCSHHHHHHHHHHC----T--TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGG---GCEEECSS-----E
T ss_pred CCceEEEccCCHHHHHHHHhhC----C--CCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHh---CceEEeCC-----E
Confidence 3456799999999999987632 1 236789999875221 1234689999985422 25777654 6
Q ss_pred EEEcccccHHHHHHHHHhC-------------CCc-----cccCCCCCCccccccccccccCCCCCcCCCcccc---EE-
Q 044784 105 ADVGGEQLWIDVLNATLTR-------------GLS-----PVSWTDYLYPTVGGTLSNAGISGHTYQKGPQITN---VL- 162 (482)
Q Consensus 105 ~~v~aG~~~~~l~~~l~~~-------------g~~-----~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~---v~- 162 (482)
++++|++++.+|.+.+.+. .+. ..+..--+..||||+|.++.. .+|. ++
T Consensus 297 l~IGA~vtl~~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp---------~sD~~~~LlA 367 (1332)
T 3unc_A 297 ISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP---------ISDLNPVFMA 367 (1332)
T ss_dssp EEEETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCT---------TCSSHHHHHH
T ss_pred EEEEecChHHHHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCC---------chhHHHHHHH
Confidence 9999999999999876422 010 111111123599999998531 3333 11
Q ss_pred ---EEEEEecCCeEEEecCCCCch-hHHhHhcC-CCCcEEEEEEEEEE
Q 044784 163 ---ELDVLTGKGEFVTCSPQKDSE-LFYAVLGG-LGQFGIITRARIVL 205 (482)
Q Consensus 163 ---~~~vv~~~G~~~~~~~~~~~d-l~~~~~g~-~g~~Giit~~~~~~ 205 (482)
.+++..++|+. +..- .| +|...+-. ...--||+++.|..
T Consensus 368 l~A~v~l~~~~G~R-~ipl---~d~Ff~g~~~t~L~~~Eil~~I~iP~ 411 (1332)
T 3unc_A 368 SGTKLTIVSRGTRR-TVPM---DHTFFPSYRKTLLGPEEILLSIEIPY 411 (1332)
T ss_dssp TTCEEEEEETTEEE-EEEC---CGGGCCSTTCCSCCTTCEEEEEEEEC
T ss_pred cCCEEEEEeCCCcE-EEEh---HHhhhhccccccCCCCcEEEEEEecC
Confidence 56677778862 2322 24 44433211 12223777777654
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=90.71 E-value=0.37 Score=46.09 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=66.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCC---ccCCCcEEEEcCCCcCcCCCceEEEcCCCCCccEE
Q 044784 29 KPFAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQ---AQANDGVVVQMNSLNRFRNGTGILISGDRSSGFYA 105 (482)
Q Consensus 29 ~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~---~~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~ 105 (482)
.|...++|.|.+|..++++ + -.-.+.+||+++... .......+||++++..+ +.|+.+++ ..+
T Consensus 5 ~~f~y~~P~sl~ea~~ll~----~---~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL---~~I~~~~~----~~l 70 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA----A---EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGL---ATISTLAD----GSL 70 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT----S---TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTT---TCEEECTT----SCE
T ss_pred CceEEEccCCHHHHHHHHh----C---CCCEEEECchhHHHHHhccCCCCCEEEECCCChhh---cceEECCC----CeE
Confidence 3456899999999988765 1 146788999998421 11235799999987322 36777665 469
Q ss_pred EEcccccHHHHHHH--HHhC-C-Cc-----cccCCCCCCcccccccc
Q 044784 106 DVGGEQLWIDVLNA--TLTR-G-LS-----PVSWTDYLYPTVGGTLS 143 (482)
Q Consensus 106 ~v~aG~~~~~l~~~--l~~~-g-~~-----~~~~~~~~~~tvGG~~~ 143 (482)
+++|++++.+|.+. +.++ . +. ..+..--+..||||++.
T Consensus 71 ~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~ 117 (324)
T 1rm6_B 71 RIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLC 117 (324)
T ss_dssp EEETTCBHHHHHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHT
T ss_pred EEccCCcHHHHHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeecc
Confidence 99999999999864 2111 0 00 11111123459999996
No 37
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=75.59 E-value=4.1 Score=46.71 Aligned_cols=101 Identities=9% Similarity=-0.038 Sum_probs=62.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCC---CccCCCcEEEEcCCCcCcCCCceEEEcCCCCCccEEEE
Q 044784 31 FAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWG---QAQANDGVVVQMNSLNRFRNGTGILISGDRSSGFYADV 107 (482)
Q Consensus 31 ~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~---~~~~~~~vvidl~~~~~~~~~~~i~~~~~~~~~~~~~v 107 (482)
...++|.|.+|+.++...- -+-+ +..|+|.+.- .-...-.++|++.+...+ +.|+.+.+ .+++
T Consensus 241 ~~w~~P~tl~el~~l~~~~----p~a~--lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL---~~i~~~~~-----~l~I 306 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMKH----PSAP--LVIGNTYLGLHMKFTDVSYPIIISPARILEL---FVVTNTKQ-----GLTL 306 (1335)
T ss_dssp CEEEECSSHHHHHHHHHHC----TTSC--BCSSCTTHHHHHC--CCCCSEEECCTTCGGG---SCEECCTT-----EEEE
T ss_pred ceEecCCCHHHHHHHHHHC----CCCe--EEEecccceeeEeecCCCCCeEEEcCcchhH---heEEecCC-----EEEE
Confidence 3468999999999985532 2223 4567776531 111134689998874321 25666554 6999
Q ss_pred cccccHHHHHHHHHhC----C-----Cc---------cccCCCCCCcccccccccc
Q 044784 108 GGEQLWIDVLNATLTR----G-----LS---------PVSWTDYLYPTVGGTLSNA 145 (482)
Q Consensus 108 ~aG~~~~~l~~~l~~~----g-----~~---------~~~~~~~~~~tvGG~~~~~ 145 (482)
+|+|++.++.+.|.+. + .. ..+.+--+..||||+|.++
T Consensus 307 GA~vtls~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~a 362 (1335)
T 3zyv_A 307 GTGLSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISR 362 (1335)
T ss_dssp ETTCBHHHHHHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTC
T ss_pred cccCcHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceecc
Confidence 9999999999888631 1 00 1111112346999999975
No 38
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=60.07 E-value=11 Score=29.97 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=38.1
Q ss_pred HHHHHhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeE-EEEcCCC
Q 044784 14 AIKLASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTI-AAKGQAH 65 (482)
Q Consensus 14 ~~~~~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~-~~~g~g~ 65 (482)
++..+...|. ..+.|.+|+++.+++|+.++.+.| ++.++|. .++=.|+
T Consensus 41 ~~~~~~~~W~--~~g~~KiVlk~~~e~el~~l~~~a--~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 41 RWKEWLNEWL--HQGQPKIIVKVNSLDEIISRAKKA--ETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHHHHHHHH--HTTCCEEEEEESSHHHHHHHHHHH--HHTTCCEEEEECCSS
T ss_pred chHHHHHHHH--HCCCcEEEEecCCHHHHHHHHHHH--HHCCCCEEEEEcCCc
Confidence 4466667774 467899999999999999999999 7899996 4555554
No 39
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=46.10 E-value=23 Score=28.28 Aligned_cols=45 Identities=7% Similarity=0.010 Sum_probs=35.1
Q ss_pred HhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeE-EEEcCCCC
Q 044784 18 ASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTI-AAKGQAHS 66 (482)
Q Consensus 18 ~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~-~~~g~g~~ 66 (482)
+...|. ..+.+.+|+++.|++|+.++.+.| ++.++|. .++-.|..
T Consensus 39 ~l~~W~--~~G~~Kvvlk~~~e~el~~L~~~a--~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 39 LRRKWL--DEGQKKVVLKVKSLEELLGIKHKA--ESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HHHHTG--GGCSSEEEEECSCHHHHHHHHHHH--HHTTCCEEEECCTTCC
T ss_pred HHHHHH--HCCCcEEEEecCCHHHHHHHHHHH--HHCCCCEEEEECCCCc
Confidence 345563 356789999999999999999999 7899996 55566653
No 40
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=45.15 E-value=25 Score=28.02 Aligned_cols=44 Identities=7% Similarity=-0.097 Sum_probs=34.8
Q ss_pred HhhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeE-EEEcCCC
Q 044784 18 ASIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTI-AAKGQAH 65 (482)
Q Consensus 18 ~~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~-~~~g~g~ 65 (482)
+...|. ..+.|.+|++..+++|+.++.+.| ++.++|. .++-.|+
T Consensus 46 ~~~~W~--~~g~~Kvvlk~~~e~el~~l~~~a--~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 46 WFEAWF--REGQKKVVVKVESEEELFKLKAEA--EKLGLPNALIRDAGL 90 (121)
T ss_dssp HHHHHH--HTTCCEEEEEESSHHHHHHHHHHH--HHTTCCEEEEECTTC
T ss_pred HHHHHH--HCCCcEEEEecCCHHHHHHHHHHH--HHCCCCEEEEEcCCc
Confidence 445564 467899999999999999999999 7899986 4555555
No 41
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=34.69 E-value=34 Score=26.98 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=33.5
Q ss_pred hhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeE-EEEcCCC
Q 044784 19 SIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTI-AAKGQAH 65 (482)
Q Consensus 19 ~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~-~~~g~g~ 65 (482)
...|. ..+.|.+|++..+++|+.++.+.| ++.++|. .++-.|+
T Consensus 43 ~~~W~--~~g~~kiVlk~~~e~~l~~l~~~a--~~~gl~~~~v~DAG~ 86 (117)
T 1rlk_A 43 FNEWY--DEGQRKIVVKVNDLDEIMEIKRMA--DSMGIVNEIVQDRGY 86 (117)
T ss_dssp HHHHH--HTTCCEEEEEESSHHHHHHHHHHH--HHHTCCEEEEECCCS
T ss_pred HHHHH--HCCCeEEEEecCCHHHHHHHHHHH--HHCCCCEEEEEeCCc
Confidence 34453 467899999999999999999999 7889886 4455544
No 42
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=32.70 E-value=34 Score=26.90 Aligned_cols=42 Identities=5% Similarity=-0.050 Sum_probs=32.1
Q ss_pred hhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeE-EEEcCC
Q 044784 19 SIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTI-AAKGQA 64 (482)
Q Consensus 19 ~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~-~~~g~g 64 (482)
...|. ..+.|.+|++..+++|+.++.+.| ++.++|. .++-.|
T Consensus 41 ~~~W~--~~g~~kivlk~~~e~~l~~l~~~a--~~~gl~~~~i~DAG 83 (115)
T 2zv3_A 41 VDEWL--REGQKKVVVKVNSEKELIDIYNKA--RSEGLPCSIIRDAG 83 (115)
T ss_dssp HHHHH--HTTCCEEEEEESSHHHHHHHHHHH--HHHTCCEEEEEECC
T ss_pred HHHHH--HCCCeEEEEecCCHHHHHHHHHHH--HHcCCCEEEEEeCC
Confidence 34553 467899999999999999999999 7888885 333343
No 43
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=30.05 E-value=80 Score=22.72 Aligned_cols=34 Identities=21% Similarity=0.068 Sum_probs=28.2
Q ss_pred EEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCC
Q 044784 32 AVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHST 67 (482)
Q Consensus 32 ~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~ 67 (482)
.+-...+.+|+..+++-. +.+|-|+++.-.|.+.
T Consensus 30 yirtatssqdirdiiksm--kdngkplvvfvngasq 63 (112)
T 2lnd_A 30 YIRTATSSQDIRDIIKSM--KDNGKPLVVFVNGASQ 63 (112)
T ss_dssp TEEEECSHHHHHHHHHHH--TTCCSCEEEEECSCCH
T ss_pred eeeeccchhhHHHHHHHH--HhcCCeEEEEecCccc
Confidence 466678999999999999 8999999988766553
No 44
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=24.11 E-value=77 Score=24.85 Aligned_cols=43 Identities=9% Similarity=0.166 Sum_probs=32.3
Q ss_pred hhhcCCcCCCCccEEEECCCHHHHHHHHHHHHhccCCCeE-EEEcCCC
Q 044784 19 SIDYGHIIKEKPFAVLYPTSVDDIRTLIYLSYNSLFSYTI-AAKGQAH 65 (482)
Q Consensus 19 ~~~~~~~~~~~p~~vv~p~~~~ev~~~v~~a~~~~~~~~~-~~~g~g~ 65 (482)
...|.. .+.|.+|++..|++|+.++.+.| ++.++|. .++=.|+
T Consensus 43 ~~~W~~--~g~~KVvlk~~~e~~l~~l~~~a--~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 43 LKQWEY--CGQPKVVVKAPDEETLIALLAHA--KMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHHHH--TTCCEEEEEESSHHHHHHHHHHH--HHTTCCEEEEEECSS
T ss_pred HHHHHh--CCCeeEEEEcCCHHHHHHHHHHH--HHCCCCEEEEEECCC
Confidence 345532 45699999999999999999999 7889885 3444443
No 45
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=20.08 E-value=1.3e+02 Score=25.06 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=32.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhccCCCeEEEEcCCCCCCCCccC
Q 044784 31 FAVLYPTSVDDIRTLIYLSYNSLFSYTIAAKGQAHSTWGQAQA 73 (482)
Q Consensus 31 ~~vv~p~~~~ev~~~v~~a~~~~~~~~~~~~g~g~~~~~~~~~ 73 (482)
...+.|.+.++|++.++.+ .+.+.-+++..||.+....+..
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a--~~~~~DlVittGG~g~~~~D~t 87 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATA--LKQGARFIITAGGTGIRAKNQT 87 (167)
T ss_dssp EEEEECSSHHHHHHHHHHH--HHTTCSEEEEESCCSSSTTCCH
T ss_pred EEEEeCCCHHHHHHHHHHH--HhCCCCEEEECCCCCCCCCcCh
Confidence 4578899999999999988 4445789999999998755543
Done!