Your job contains 1 sequence.
>044790
MAVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSS
HDSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRKCHSSSGSGSESCIMTQKSTKSK
NAEGSDNNSGSNDEDDKGSIGLNIQDGSDNGSGTQLSSMGNN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044790
(162 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 462 1.1e-44 2
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 318 1.9e-30 2
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 213 2.0e-16 1
UNIPROTKB|Q4GZK8 - symbol:rr3 "Type A response regulator ... 158 1.3e-11 1
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ... 163 1.9e-11 1
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 166 2.5e-11 1
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 166 2.6e-11 1
UNIPROTKB|Q4GZL0 - symbol:rr1 "Type A response regulator ... 149 1.2e-10 1
TAIR|locus:2011286 - symbol:ARR7 "response regulator 7" s... 149 1.2e-10 1
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 158 1.3e-10 1
TAIR|locus:2025911 - symbol:ARR3 "response regulator 3" s... 148 1.5e-10 1
UNIPROTKB|Q4GZK5 - symbol:rr6 "Type A response regulator ... 147 2.0e-10 1
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 155 3.2e-10 1
UNIPROTKB|Q4GZK2 - symbol:rr9 "Type A response regulator ... 144 4.1e-10 1
TAIR|locus:2194584 - symbol:ARR4 "response regulator 4" s... 145 5.9e-10 1
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ... 148 6.4e-10 1
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re... 148 6.4e-10 1
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 151 7.0e-10 1
TAIR|locus:2080590 - symbol:ARR9 "response regulator 9" s... 142 8.1e-10 1
TAIR|locus:2102509 - symbol:RR17 "response regulator 17" ... 140 1.1e-09 1
TAIR|locus:2170723 - symbol:ARR6 "response regulator 6" s... 138 1.8e-09 1
TAIR|locus:2040282 - symbol:RR3 "response regulator 3" sp... 138 1.9e-09 1
UNIPROTKB|Q4GZK4 - symbol:rr7 "Type A response regulator ... 137 2.2e-09 1
TAIR|locus:2097870 - symbol:RR5 "response regulator 5" sp... 137 2.2e-09 1
UNIPROTKB|Q4GZK7 - symbol:rr4 "Type A response regulator ... 137 3.1e-09 1
TAIR|locus:2027237 - symbol:ARR15 "response regulator 15"... 135 3.6e-09 1
UNIPROTKB|Q4GZK9 - symbol:rr2 "Type A response regulator ... 136 5.7e-09 1
DICTYBASE|DDB_G0284331 - symbol:regA "response regulator ... 140 1.9e-08 1
TIGR_CMR|BA_0577 - symbol:BA_0577 "response regulator" sp... 108 4.8e-08 2
UNIPROTKB|Q4GZK3 - symbol:rr8 "Type A response regulator ... 123 6.8e-08 1
TIGR_CMR|GSU_1117 - symbol:GSU_1117 "response regulator" ... 120 1.4e-07 1
UNIPROTKB|E1WEB4 - symbol:cpxR "Two-component response re... 105 1.6e-07 2
TIGR_CMR|CJE_1261 - symbol:CJE_1261 "chemotaxis protein C... 119 1.8e-07 1
UNIPROTKB|P71403 - symbol:cheY "Chemotaxis protein CheY h... 118 2.3e-07 1
UNIPROTKB|Q1DF43 - symbol:MXAN_0460 "Response regulator" ... 121 3.0e-07 1
TIGR_CMR|BA_4394 - symbol:BA_4394 "stage 0 sporulation pr... 121 3.3e-07 1
TIGR_CMR|GSU_2574 - symbol:GSU_2574 "response regulator" ... 123 4.1e-07 1
UNIPROTKB|Q74AX6 - symbol:cheY40H-1 "Response receiver Ch... 114 6.1e-07 1
TIGR_CMR|GSU_2223 - symbol:GSU_2223 "chemotaxis protein C... 114 6.1e-07 1
TIGR_CMR|SPO_1953 - symbol:SPO_1953 "phosphate regulon tr... 116 8.0e-07 1
TIGR_CMR|CHY_1018 - symbol:CHY_1018 "chemotaxis response ... 112 1.0e-06 1
TIGR_CMR|CPS_1619 - symbol:CPS_1619 "DNA-binding response... 112 1.0e-06 1
TIGR_CMR|GSU_0104 - symbol:GSU_0104 "response regulator, ... 111 1.3e-06 1
UNIPROTKB|Q9KS16 - symbol:VC_1445 "Sensor histidine kinas... 121 1.4e-06 1
TIGR_CMR|VC_1445 - symbol:VC_1445 "sensor histidine kinas... 121 1.4e-06 1
TIGR_CMR|BA_0996 - symbol:BA_0996 "sensor histidine kinas... 123 1.5e-06 1
UNIPROTKB|Q9KS62 - symbol:VC_1398 "Chemotaxis protein Che... 110 1.6e-06 1
TIGR_CMR|VC_1398 - symbol:VC_1398 "chemotaxis protein Che... 110 1.6e-06 1
TIGR_CMR|BA_0994 - symbol:BA_0994 "response regulator" sp... 117 2.0e-06 1
TIGR_CMR|GSU_0008 - symbol:GSU_0008 "sensory box histidin... 118 2.5e-06 1
TIGR_CMR|GSU_1891 - symbol:GSU_1891 "response regulator" ... 116 2.5e-06 1
UNIPROTKB|Q8ECB3 - symbol:flrC "Two component signal tran... 115 4.2e-06 1
TIGR_CMR|SO_3230 - symbol:SO_3230 "flagellar regulatory p... 115 4.2e-06 1
TIGR_CMR|CPS_0681 - symbol:CPS_0681 "DNA-binding response... 109 6.1e-06 1
UNIPROTKB|Q74DM7 - symbol:cheY34H-1 "Response receiver Ch... 104 7.0e-06 1
TIGR_CMR|GSU_1289 - symbol:GSU_1289 "chemotaxis protein C... 104 7.0e-06 1
TIGR_CMR|GSU_2287 - symbol:GSU_2287 "response regulator" ... 104 7.0e-06 1
TIGR_CMR|CHY_2047 - symbol:CHY_2047 "DNA-binding response... 107 8.6e-06 1
TAIR|locus:2141020 - symbol:APRR2 species:3702 "Arabidops... 113 8.9e-06 1
UNIPROTKB|Q48P87 - symbol:pilG "Type IV pilus response re... 103 9.0e-06 1
TIGR_CMR|BA_3067 - symbol:BA_3067 "DNA-binding response r... 106 1.0e-05 1
UNIPROTKB|Q9KT55 - symbol:VC_1050 "Response regulator" sp... 110 1.1e-05 1
TIGR_CMR|VC_1050 - symbol:VC_1050 "response regulator" sp... 110 1.1e-05 1
UNIPROTKB|Q1D948 - symbol:MXAN_2606 "Sensor histidine kin... 115 1.2e-05 1
UNIPROTKB|P06534 - symbol:spo0A "Stage 0 sporulation prot... 107 1.2e-05 1
TAIR|locus:2199342 - symbol:APRR6 "pseudo-response regula... 113 1.4e-05 1
UNIPROTKB|P14375 - symbol:zraR species:83333 "Escherichia... 110 1.4e-05 1
UNIPROTKB|Q1CXR3 - symbol:difD "Fibril biogenesis regulat... 101 1.5e-05 1
UNIPROTKB|P0AE88 - symbol:cpxR "CpxR transcriptional dual... 105 1.5e-05 1
TIGR_CMR|SO_1416 - symbol:SO_1416 "DNA-binding response r... 103 1.6e-05 1
UNIPROTKB|Q485M3 - symbol:flrC "Flagellar regulatory prot... 109 1.9e-05 1
TIGR_CMR|CPS_1500 - symbol:CPS_1500 "flagellar regulatory... 109 1.9e-05 1
UNIPROTKB|Q0BZW4 - symbol:pleD "Response regulator PleD" ... 109 1.9e-05 1
TIGR_CMR|DET_0316 - symbol:DET_0316 "DNA-binding response... 103 2.3e-05 1
UNIPROTKB|Q9WYT9 - symbol:TM_0468 "Response regulator" sp... 99 2.4e-05 1
TIGR_CMR|GSU_1129 - symbol:GSU_1129 "sigma-54 dependent D... 108 2.4e-05 1
TIGR_CMR|GSU_2915 - symbol:GSU_2915 "sigma-54 dependent D... 108 2.5e-05 1
UNIPROTKB|Q4K714 - symbol:PFL_4888 "Sigma-54 dependent DN... 108 2.5e-05 1
UNIPROTKB|Q9KSH9 - symbol:VC_1277 "Transcriptional regula... 102 2.6e-05 1
TIGR_CMR|VC_1277 - symbol:VC_1277 "transcriptional regula... 102 2.6e-05 1
UNIPROTKB|Q746Z1 - symbol:GSU3376 "Response receiver-modu... 105 2.7e-05 1
TIGR_CMR|GSU_3376 - symbol:GSU_3376 "GGDEF/response regul... 105 2.7e-05 1
TIGR_CMR|CPS_4166 - symbol:CPS_4166 "response regulator" ... 108 2.9e-05 1
TIGR_CMR|GSU_0149 - symbol:GSU_0149 "sensor histidine kin... 106 2.9e-05 1
TIGR_CMR|CJE_1664 - symbol:CJE_1664 "DNA-binding response... 102 3.0e-05 1
UNIPROTKB|P0AFU4 - symbol:glrR "GlrR DNA-binding transcri... 107 3.0e-05 1
UNIPROTKB|Q48GG3 - symbol:cheY2 "Chemotaxis protein CheY"... 98 3.0e-05 1
UNIPROTKB|Q9A5I5 - symbol:pleD "Response regulator PleD" ... 107 3.1e-05 1
TIGR_CMR|DET_0170 - symbol:DET_0170 "DNA-binding response... 102 3.2e-05 1
UNIPROTKB|Q4KG39 - symbol:cheY "Chemotaxis protein CheY" ... 97 3.9e-05 1
UNIPROTKB|Q7D1A8 - symbol:cheY "Chemotaxis receiver prote... 97 3.9e-05 1
NCBI_NP|NP_353545.1 - symbol:cheY "chemotaxisreceiverprot... 97 3.9e-05 1
UNIPROTKB|Q8EEQ6 - symbol:cheY "Chemotaxis signal transdu... 96 5.0e-05 1
TIGR_CMR|CPS_4295 - symbol:CPS_4295 "putative chemotaxis ... 96 5.0e-05 1
TIGR_CMR|SO_2318 - symbol:SO_2318 "chemotaxis protein Che... 96 5.0e-05 1
TIGR_CMR|ECH_0773 - symbol:ECH_0773 "putative response re... 105 5.2e-05 1
UNIPROTKB|Q06065 - symbol:atoC "AtoC transcriptional acti... 105 5.3e-05 1
TIGR_CMR|BA_2212 - symbol:BA_2212 "DNA-binding response r... 99 6.6e-05 1
TIGR_CMR|GSU_2581 - symbol:GSU_2581 "sigma-54 dependent t... 104 6.6e-05 1
TIGR_CMR|CPS_1260 - symbol:CPS_1260 "putative nitrate/nit... 98 6.7e-05 1
WARNING: Descriptions of 47 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 462 (167.7 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 93/156 (59%), Positives = 106/156 (67%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ NG+QAWK+LEDL + ID+VLTEV+MP LSGIGLL KI+NHK+ +NIPVIMMSSHD
Sbjct: 104 VVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHD 163
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRKCHXXXXXXXXXCI-MTQKSTKSKX 121
SM +VFKCLSKGAV FLVKPIRKNEL+ LWQHVWR+C TQKS KSK
Sbjct: 164 SMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQTQKSVKSKS 223
Query: 122 XXXXXXXXXXXXXXXXXXIGLNIQDGSDNGSGTQLS 157
IGLN DGS +GSG Q S
Sbjct: 224 IKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSS 259
Score = 34 (17.0 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 146 DGSDNGSGTQLSSMGN 161
DGS +GSG S GN
Sbjct: 647 DGSGSGSG---SGSGN 659
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 318 (117.0 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 55/96 (57%), Positives = 76/96 (79%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+AV +GL AW++L++ IDL+LTE+ +P +SG LL +M H+ CKNIPVIMMSS D
Sbjct: 63 VVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQD 122
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
S+ +V KC+ +GA +L+KP+RKNEL+NLWQHVWR+
Sbjct: 123 SIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
Score = 34 (17.0 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 148 SDNGSGTQ-LSSMGNN 162
SD GSG Q ++ G+N
Sbjct: 193 SDQGSGAQAINYNGHN 208
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 213 (80.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 43/96 (44%), Positives = 58/96 (60%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V AV++ Q L ID++L E+ +P G+ +LR I K + IPVIMMS D
Sbjct: 45 VTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQD 104
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+ +V KCL GA +LVKP+R NEL NLW H+WR+
Sbjct: 105 EVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRR 140
>UNIPROTKB|Q4GZK8 [details] [associations]
symbol:rr3 "Type A response regulator 3" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000127 EMBL:AJ938072
STRING:Q4GZK8 Uniprot:Q4GZK8
Length = 131
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 32/96 (33%), Positives = 59/96 (61%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V V++G +A ++L L + +++T+ MP ++G LL+++ K IPV++MSS +
Sbjct: 37 VTTVDSGKRALEVLS-LDRNVHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSEN 95
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
S + + +CL +GA FL+KP+R +++ L V K
Sbjct: 96 SPTRIRRCLEEGAEDFLIKPVRPSDVSRLCNRVIMK 131
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 163 (62.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 12 AWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCL 71
A IL + D DLVL++V MP ++G LL+++ + ++PVIMMS + V +
Sbjct: 46 ALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEM--DLPVIMMSVDGRTTTVMTGI 103
Query: 72 SKGAVYFLVKPIRKNELQNLWQHVWR-KC 99
+ GA +L+KPIR EL+N+WQHV R KC
Sbjct: 104 NHGACDYLIKPIRPEELKNIWQHVVRRKC 132
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 166 (63.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 36/88 (40%), Positives = 57/88 (64%)
Query: 12 AWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCK-NIPVIMMSSHDSMSIVFKC 70
A +L + D+V+++V MP + G K++ H + ++PVIMMS+ DS S+V K
Sbjct: 63 ALSLLRKNKNGFDIVISDVHMPDMDGF----KLLEHVGLEMDLPVIMMSADDSKSVVLKG 118
Query: 71 LSKGAVYFLVKPIRKNELQNLWQHVWRK 98
++ GAV +L+KP+R L+N+WQHV RK
Sbjct: 119 VTHGAVDYLIKPVRIEALKNIWQHVVRK 146
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 166 (63.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCK-NIPVIMMSSHDSMSIVFKCLSKGAVYFLVKP 82
D+V+++V MP + G K++ H + ++PVIMMS+ DS S+V K ++ GAV +L+KP
Sbjct: 84 DIVISDVHMPDMDGF----KLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKP 139
Query: 83 IRKNELQNLWQHVWRK 98
+R L+N+WQHV RK
Sbjct: 140 VRMEALKNIWQHVVRK 155
>UNIPROTKB|Q4GZL0 [details] [associations]
symbol:rr1 "Type A response regulator 1" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CM000129 EMBL:AJ938070 eggNOG:NOG76823
Uniprot:Q4GZL0
Length = 231
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 39/101 (38%), Positives = 61/101 (60%)
Query: 3 VIAVENGLQAWKIL---EDLMDQ-IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMM 58
VIAV++ +A + L E+ +Q ID+VLT+ MP ++G LL+ I K IPVI+M
Sbjct: 38 VIAVDSAKKAMEFLGLKEEGKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVM 97
Query: 59 SSHDSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRKC 99
SS + + +C++ GA F+VKP++ ++Q L RKC
Sbjct: 98 SSENEPQRISRCMNAGAEDFIVKPLQSKDVQRL-----RKC 133
>TAIR|locus:2011286 [details] [associations]
symbol:ARR7 "response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=RCA] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0010200 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492
ProtClustDB:CLSN2914197 eggNOG:COG3706 EMBL:AB008490 EMBL:AC068602
IPI:IPI00536268 PIR:T50854 RefSeq:NP_173339.1 UniGene:At.238
ProteinModelPortal:Q9ZWS7 SMR:Q9ZWS7 IntAct:Q9ZWS7 STRING:Q9ZWS7
EnsemblPlants:AT1G19050.1 GeneID:838487 KEGG:ath:AT1G19050
GeneFarm:4124 TAIR:At1g19050 InParanoid:Q9ZWS7 OMA:LRISSCK
PhylomeDB:Q9ZWS7 Genevestigator:Q9ZWS7 GermOnline:AT1G19050
GO:GO:0019827 Uniprot:Q9ZWS7
Length = 206
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 31/90 (34%), Positives = 56/90 (62%)
Query: 9 GLQAWKILEDLMD-QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
GL K +L D +++L++T+ MP LSG LL+KI + +PV++MSS + + +
Sbjct: 64 GLDGGKGASNLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRI 123
Query: 68 FKCLSKGAVYFLVKPIRKNELQNLWQHVWR 97
+CL +GA FL+KP++ +++ + Q + R
Sbjct: 124 QECLKEGAEEFLLKPVKLADVKRIKQLIMR 153
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 158 (60.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 36/96 (37%), Positives = 57/96 (59%)
Query: 4 IAVENGLQ-AWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
+ N Q A ++L + ++ DLV+++V MP + G LL + ++PVIM+S+H
Sbjct: 43 VTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEM---DLPVIMLSAHS 99
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
V K + GA +L+KP+R EL+N+WQHV RK
Sbjct: 100 DPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRK 135
>TAIR|locus:2025911 [details] [associations]
symbol:ARR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IDA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IDA;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=TAS] [GO:0010114
"response to red light" evidence=IMP] [GO:0010161 "red light
signaling pathway" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0007623 GO:GO:0006351 GO:GO:0042752 EMBL:AC007258
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008486 IPI:IPI00532280
PIR:T50853 RefSeq:NP_176202.1 UniGene:At.237
ProteinModelPortal:Q9ZWS9 SMR:Q9ZWS9 IntAct:Q9ZWS9 STRING:Q9ZWS9
EnsemblPlants:AT1G59940.1 GeneID:842288 KEGG:ath:AT1G59940
GeneFarm:4120 TAIR:At1g59940 eggNOG:COG3706 InParanoid:Q9ZWS9
OMA:RSEMIGI PhylomeDB:Q9ZWS9 ProtClustDB:CLSN2912722
Genevestigator:Q9ZWS9 GermOnline:AT1G59940 GO:GO:0010161
Uniprot:Q9ZWS9
Length = 231
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 27/76 (35%), Positives = 52/76 (68%)
Query: 22 QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVK 81
++DL++T+ MP ++G LL+KI + K +PV++MSS + M+ + +CL +GA FL+K
Sbjct: 87 KVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLK 146
Query: 82 PIRKNELQNLWQHVWR 97
P++ +++ L ++ R
Sbjct: 147 PVKLADVKRLRSYLTR 162
>UNIPROTKB|Q4GZK5 [details] [associations]
symbol:rr6 "Type A response regulator 6" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AJ938075 ProteinModelPortal:Q4GZK5 KEGG:dosa:Os04t0673300-01
Gramene:Q4GZK5 Uniprot:Q4GZK5
Length = 170
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/94 (30%), Positives = 58/94 (61%)
Query: 3 VIAVENGLQAWKIL-EDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
V VE+ +A ++L L+ +++++T+ MP ++G LL+++ K IPV++MSS
Sbjct: 76 VTTVESATRALELLCLGLVPNVNMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSE 135
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHV 95
+ + + +CL +GA FL+KP+R +++ L +
Sbjct: 136 NVPNRISRCLEEGAEDFLLKPVRPSDVSRLCSRI 169
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 155 (59.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 34/95 (35%), Positives = 56/95 (58%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V +A ++L + ++ DLV+++V MP + G LL + ++PVIM+S+H
Sbjct: 43 VTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEM---DLPVIMLSAHS 99
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWR 97
V K ++ GA +L+KP+R EL+N+WQHV R
Sbjct: 100 DPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVR 134
>UNIPROTKB|Q4GZK2 [details] [associations]
symbol:rr9 "Type A response regulator 9" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009735
GO:GO:0006355 GO:GO:0035556 GO:GO:0007623 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
EMBL:CM000136 EMBL:AJ938078 STRING:Q4GZK2 Uniprot:Q4GZK2
Length = 201
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 27/78 (34%), Positives = 51/78 (65%)
Query: 23 IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKP 82
++L++T+ MP ++G LL+KI ++IPV++MSS + S + +CL +GA F +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKP 128
Query: 83 IRKNELQNLWQHVWR-KC 99
+R +++ L H+ + +C
Sbjct: 129 VRLSDMSKLKPHILKSRC 146
>TAIR|locus:2194584 [details] [associations]
symbol:ARR4 "response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010017
"red or far-red light signaling pathway" evidence=IMP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;IMP;TAS]
[GO:0010114 "response to red light" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA;IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IGI] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009963 "positive
regulation of flavonoid biosynthetic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0007623 GO:GO:0004674
GO:GO:0046777 GO:GO:0006351 GO:GO:0042752 GO:GO:0010114
GO:GO:0009793 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC007067 GO:GO:0010017
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2912722
EMBL:AB008487 EMBL:AB010915 EMBL:AF057282 IPI:IPI00523637
PIR:T48851 RefSeq:NP_172517.1 UniGene:At.22981 UniGene:At.67259
ProteinModelPortal:O82798 SMR:O82798 IntAct:O82798 STRING:O82798
EnsemblPlants:AT1G10470.1 GeneID:837587 KEGG:ath:AT1G10470
GeneFarm:4121 TAIR:At1g10470 InParanoid:O82798 OMA:KRIRDYM
PhylomeDB:O82798 Genevestigator:O82798 GermOnline:AT1G10470
Uniprot:O82798
Length = 259
Score = 145 (56.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 25/74 (33%), Positives = 50/74 (67%)
Query: 22 QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVK 81
++DL++T+ MP ++G LL+KI + +PV++MSS + ++ + +CL +GA FL+K
Sbjct: 88 KVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLK 147
Query: 82 PIRKNELQNLWQHV 95
P++ +++ L H+
Sbjct: 148 PVKLADVKRLRSHL 161
>UNIPROTKB|Q7Y0W3 [details] [associations]
symbol:Q7Y0W3 "Two-component response regulator EHD1"
species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0048576 "positive regulation of short-day
photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
Length = 341
Score = 148 (57.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 33/97 (34%), Positives = 56/97 (57%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCK-NIPVIMMSSH 61
V +N +A + D +DLV+++ P G+ +L+++ T K IP ++M+S
Sbjct: 37 VTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEV----TSKFGIPTVIMASS 92
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+ V K ++ GA FL+KP+R EL N+WQH++RK
Sbjct: 93 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRK 129
>UNIPROTKB|Q7Y0W5 [details] [associations]
symbol:EHD1 "Two-component response regulator EHD1"
species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
Length = 341
Score = 148 (57.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 33/97 (34%), Positives = 56/97 (57%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCK-NIPVIMMSSH 61
V +N +A + D +DLV+++ P G+ +L+++ T K IP ++M+S
Sbjct: 37 VTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEV----TSKFGIPTVIMASS 92
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+ V K ++ GA FL+KP+R EL N+WQH++RK
Sbjct: 93 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRK 129
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 151 (58.2 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 11 QAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCK-NIPVIMMSSHDSMSIVFK 69
+A ++L + D D+V+++V MP + G K++ H + ++PVIMMS S V K
Sbjct: 45 EALRLLRERKDGYDIVISDVNMPDMDGF----KLLEHVGLELDLPVIMMSVDGETSRVMK 100
Query: 70 CLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+ GA +L+KPIR EL+ +WQHV RK
Sbjct: 101 GVQHGACDYLLKPIRMKELKIIWQHVLRK 129
>TAIR|locus:2080590 [details] [associations]
symbol:ARR9 "response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IPI] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;IMP;TAS] [GO:0007623 "circadian rhythm"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 GO:GO:0009536 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623 GO:GO:0006351
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
ProtClustDB:CLSN2683767 EMBL:AB010918 EMBL:AL138655 EMBL:AY090234
EMBL:AY133571 IPI:IPI00543561 PIR:T47764 RefSeq:NP_191263.1
UniGene:At.245 ProteinModelPortal:O80366 SMR:O80366 IntAct:O80366
STRING:O80366 EnsemblPlants:AT3G57040.1 GeneID:824871
KEGG:ath:AT3G57040 GeneFarm:4126 TAIR:At3g57040 InParanoid:O80366
OMA:GISTDRA PhylomeDB:O80366 Genevestigator:O80366
GermOnline:AT3G57040 Uniprot:O80366
Length = 234
Score = 142 (55.0 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 25/76 (32%), Positives = 49/76 (64%)
Query: 22 QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVK 81
+++L++T+ MP ++G LL+K+ ++IPV++MSS + + + +CL +GA F +K
Sbjct: 73 EVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLK 132
Query: 82 PIRKNELQNLWQHVWR 97
P+R +L L H+ +
Sbjct: 133 PVRLADLNKLKPHMMK 148
>TAIR|locus:2102509 [details] [associations]
symbol:RR17 "response regulator 17" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=TAS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005739 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K14492
EMBL:AF305722 EMBL:AL163972 IPI:IPI00540746 PIR:T49039
RefSeq:NP_567037.1 UniGene:At.5240 ProteinModelPortal:Q9FPR6
SMR:Q9FPR6 STRING:Q9FPR6 EnsemblPlants:AT3G56380.1 GeneID:824805
KEGG:ath:AT3G56380 GeneFarm:4130 TAIR:At3g56380 InParanoid:Q9FPR6
OMA:MEEELHV PhylomeDB:Q9FPR6 ProtClustDB:CLSN2917444
Genevestigator:Q9FPR6 GermOnline:AT3G56380 Uniprot:Q9FPR6
Length = 153
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 31/103 (30%), Positives = 61/103 (59%)
Query: 3 VIAVENGLQAWKIL--------EDLMD--QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKN 52
V ENGL+A + L + L + +++L++T+ MP ++G LL+K+ K
Sbjct: 46 VTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKE 105
Query: 53 IPVIMMSSHDSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHV 95
+PV+++SS + + + KCL+ GA F+ KP++ ++++ L H+
Sbjct: 106 VPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEKLKCHL 148
>TAIR|locus:2170723 [details] [associations]
symbol:ARR6 "response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009536 GO:GO:0006355 GO:GO:0006351 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2684027
EMBL:AB008489 EMBL:AB008491 EMBL:AB009053 EMBL:BT004799
IPI:IPI00547780 PIR:T50857 PIR:T50860 RefSeq:NP_201097.1
UniGene:At.24207 ProteinModelPortal:Q9ZWS6 SMR:Q9ZWS6 IntAct:Q9ZWS6
STRING:Q9ZWS6 EnsemblPlants:AT5G62920.1 GeneID:836412
KEGG:ath:AT5G62920 GeneFarm:4123 TAIR:At5g62920 InParanoid:Q9ZWS6
OMA:DDSQEIK PhylomeDB:Q9ZWS6 Genevestigator:Q9ZWS6
GermOnline:AT5G62920 Uniprot:Q9ZWS6
Length = 186
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 26/75 (34%), Positives = 51/75 (68%)
Query: 17 EDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAV 76
EDL +++L++T+ MP ++G LL+KI + +PV++MSS + + + +CL +GA
Sbjct: 76 EDL--KVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAE 133
Query: 77 YFLVKPIRKNELQNL 91
FL+KP++ ++++ L
Sbjct: 134 DFLLKPVKLSDVKRL 148
>TAIR|locus:2040282 [details] [associations]
symbol:RR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0007623 "circadian
rhythm" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=RCA] [GO:0048831 "regulation of shoot system
development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009536
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
EMBL:AB010917 EMBL:AC005662 EMBL:AY074643 IPI:IPI00535987
PIR:T48853 RefSeq:NP_181663.1 UniGene:At.244
ProteinModelPortal:O80365 SMR:O80365 IntAct:O80365 STRING:O80365
EnsemblPlants:AT2G41310.1 GeneID:818730 KEGG:ath:AT2G41310
GeneFarm:4125 TAIR:At2g41310 InParanoid:O80365 OMA:METESKF
PhylomeDB:O80365 ProtClustDB:CLSN2683767 Genevestigator:O80365
GermOnline:AT2G41310 Uniprot:O80365
Length = 225
Score = 138 (53.6 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 25/76 (32%), Positives = 49/76 (64%)
Query: 22 QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVK 81
+I+L++T+ MP ++G LL+K+ ++IPV++MSS + + + +CL +GA F +K
Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130
Query: 82 PIRKNELQNLWQHVWR 97
P++ +L L H+ +
Sbjct: 131 PVKLADLTKLKPHMMK 146
>UNIPROTKB|Q4GZK4 [details] [associations]
symbol:rr7 "Type A response regulator 7" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938076
ProteinModelPortal:Q4GZK4 KEGG:dosa:Os07t0449700-01 Gramene:Q4GZK4
Uniprot:Q4GZK4
Length = 206
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 28/85 (32%), Positives = 52/85 (61%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
++G +A +IL + +++T+ MP ++G LL+KI K IPV++MSS + +
Sbjct: 117 DSGKRALEILGS-EPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTR 175
Query: 67 VFKCLSKGAVYFLVKPIRKNELQNL 91
+ +CL +GA FL+KP+R ++ +
Sbjct: 176 ISRCLEEGAEDFLLKPVRPADISRI 200
>TAIR|locus:2097870 [details] [associations]
symbol:RR5 "response regulator 5" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IMP] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0010114 "response to red light"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0009536
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0010114 GO:GO:0009736 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AL049658
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008488 EMBL:AB010916
EMBL:AF057281 EMBL:AY072390 EMBL:AY114698 IPI:IPI00516847
PIR:T06673 PIR:T50855 PIR:T50856 RefSeq:NP_190393.1
UniGene:At.24915 ProteinModelPortal:Q9SB04 SMR:Q9SB04 IntAct:Q9SB04
STRING:Q9SB04 EnsemblPlants:AT3G48100.1 GeneID:823965
KEGG:ath:AT3G48100 GeneFarm:4122 TAIR:At3g48100 InParanoid:Q9SB04
OMA:LEANDIY PhylomeDB:Q9SB04 ProtClustDB:CLSN2684027
Genevestigator:Q9SB04 GermOnline:AT3G48100 Uniprot:Q9SB04
Length = 184
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 17 EDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAV 76
EDL +I+L++T+ MP ++G LL+KI + IPV++MSS + + + +CL +GA
Sbjct: 77 EDL--KINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAE 134
Query: 77 YFLVKPIRKNELQNL 91
FL+KP++ +++ L
Sbjct: 135 DFLLKPVKLADVKRL 149
>UNIPROTKB|Q4GZK7 [details] [associations]
symbol:rr4 "Type A response regulator 4" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000126
EMBL:AJ938073 Uniprot:Q4GZK7
Length = 232
Score = 137 (53.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 23/76 (30%), Positives = 50/76 (65%)
Query: 23 IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKP 82
++L++T+ MP ++G LL+++ + K+IPV++MSS + + + +CL GA F +KP
Sbjct: 74 VNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFFLKP 133
Query: 83 IRKNELQNLWQHVWRK 98
++ +++ L H+ ++
Sbjct: 134 VKLADMKKLKSHLLKR 149
>TAIR|locus:2027237 [details] [associations]
symbol:ARR15 "response regulator 15" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=IGI;RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC008263 EMBL:AC013258
EMBL:AF305720 IPI:IPI00538856 RefSeq:NP_177627.1 UniGene:At.11589
ProteinModelPortal:Q7G8V2 SMR:Q7G8V2 IntAct:Q7G8V2 STRING:Q7G8V2
EnsemblPlants:AT1G74890.1 GeneID:843828 KEGG:ath:AT1G74890
GeneFarm:4128 TAIR:At1g74890 HOGENOM:HOG000034820 InParanoid:Q7G8V2
KO:K14492 OMA:KISACKV PhylomeDB:Q7G8V2 ProtClustDB:CLSN2914197
Genevestigator:Q7G8V2 GermOnline:AT1G74890 Uniprot:Q7G8V2
Length = 206
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 28/82 (34%), Positives = 53/82 (64%)
Query: 16 LEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGA 75
L+DL +++L++T+ MP L+G LL+KI + IPV++MSS + + +C+ +GA
Sbjct: 68 LKDL--KVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGA 125
Query: 76 VYFLVKPIRKNELQNLWQHVWR 97
FL+KP++ +++ L + + R
Sbjct: 126 EEFLLKPVKLADVKRLKELIMR 147
>UNIPROTKB|Q4GZK9 [details] [associations]
symbol:rr2 "Type A response regulator 2" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938071
ProteinModelPortal:Q4GZK9 KEGG:dosa:Os02t0557800-01 Gramene:Q4GZK9
Uniprot:Q4GZK9
Length = 252
Score = 136 (52.9 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 21 DQ-IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFL 79
DQ ID+VLT+ MP ++G LL+ I + IPV++MSS + + +CL+ GA F+
Sbjct: 81 DQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENEPQRISRCLTAGAEDFI 140
Query: 80 VKPIRKNELQNLWQHVWRKC 99
+KP++ N++Q L RKC
Sbjct: 141 LKPLKMNDVQRL-----RKC 155
>DICTYBASE|DDB_G0284331 [details] [associations]
symbol:regA "response regulator receiver
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0051281
"positive regulation of release of sequestered calcium ion into
cytosol" evidence=IMP] [GO:0051279 "regulation of release of
sequestered calcium ion into cytosol" evidence=IMP] [GO:0046058
"cAMP metabolic process" evidence=IMP] [GO:0031276 "negative
regulation of lateral pseudopodium assembly" evidence=IMP]
[GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity"
evidence=IDA;IMP] [GO:0005622 "intracellular" evidence=TAS]
[GO:0006970 "response to osmotic stress" evidence=TAS] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0047555 "3',5'-cyclic-GMP phosphodiesterase
activity" evidence=IDA] [GO:0006198 "cAMP catabolic process"
evidence=IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0004114 "3',5'-cyclic-nucleotide
phosphodiesterase activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001789 InterPro:IPR002073 InterPro:IPR003607
InterPro:IPR023088 InterPro:IPR023174 Pfam:PF00072 Pfam:PF00233
PRINTS:PR00387 PROSITE:PS00126 PROSITE:PS50110 SMART:SM00448
SMART:SM00471 dictyBase:DDB_G0284331 GO:GO:0005829
GenomeReviews:CM000153_GR GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0030435 GO:GO:0030587 GO:GO:0005622 GO:GO:0006970
GO:GO:0051281 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:AAFI02000064 GO:GO:0030552 GO:GO:0031276
GO:GO:0004115 GO:GO:0006198 Gene3D:1.10.1300.10 EMBL:U60170
EMBL:AJ005398 RefSeq:XP_638612.1 ProteinModelPortal:Q23917
STRING:Q23917 EnsemblProtists:DDB0191479 GeneID:8624583
KEGG:ddi:DDB_G0284331 OMA:SHYETIC ProtClustDB:CLSZ2728943
Uniprot:Q23917
Length = 793
Score = 140 (54.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V V NG AW+ + + DLVLT+V+MP ++G LL++I +H ++IPVI+MS
Sbjct: 186 VTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTA 245
Query: 63 -SMSIVFKCLSKGAVYFLVKPIRKN----ELQNLWQHVWRK 98
+ G FL KPI K ++ + Q +W++
Sbjct: 246 VDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQR 286
>TIGR_CMR|BA_0577 [details] [associations]
symbol:BA_0577 "response regulator" species:198094
"Bacillus anthracis str. Ames" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR024187 Pfam:PF00072 PIRSF:PIRSF006171 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0003677 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0009605 GO:GO:0001071
HOGENOM:HOG000034816 RefSeq:NP_843111.2 RefSeq:YP_026824.1
ProteinModelPortal:Q81VC0 DNASU:1087932
EnsemblBacteria:EBBACT00000008382 EnsemblBacteria:EBBACT00000024391
GeneID:1087932 GeneID:2849175 KEGG:ban:BA_0577 KEGG:bat:BAS0546
PATRIC:18778756 KO:K11615 ProtClustDB:CLSK915867
BioCyc:BANT260799:GJAJ-606-MONOMER Uniprot:Q81VC0
Length = 235
Score = 108 (43.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V AV + A ++LE+ +IDLVL ++ MP +G LL I N + K I ++M+S+
Sbjct: 30 VQAVNSIKSAIEVLEE--SRIDLVLLDIFMPEETGFELLMYIRNQE--KEIDIMMISAVH 85
Query: 63 SMSIVFKCLSKGAVYFLVKP 82
M + K L G V +L+KP
Sbjct: 86 DMGSIKKALQYGVVDYLIKP 105
Score = 36 (17.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 79 LVKPIRKNELQNLWQHV 95
L K + K LQ +WQ +
Sbjct: 154 LPKGLTKQTLQLIWQKI 170
>UNIPROTKB|Q4GZK3 [details] [associations]
symbol:rr8 "Type A response regulator 8" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:AJ938077 ProteinModelPortal:Q4GZK3
STRING:Q4GZK3 KEGG:dosa:Os08t0376700-01 KEGG:dosa:Os08t0377200-01
Gramene:Q4GZK3 Uniprot:Q4GZK3
Length = 121
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 25/93 (26%), Positives = 55/93 (59%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V AVE+ +QA L+ D +D+++++ MP ++G LL ++ ++PV++ SS +
Sbjct: 30 VTAVESVMQALMFLDSEHD-VDMIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDN 88
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHV 95
+ KCL GA +++KP++ ++ + +++
Sbjct: 89 IPERIRKCLDGGAKDYILKPVKIVDVPRIMKYI 121
>TIGR_CMR|GSU_1117 [details] [associations]
symbol:GSU_1117 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P06143
RefSeq:NP_952170.1 ProteinModelPortal:Q74E47 GeneID:2686890
KEGG:gsu:GSU1117 PATRIC:22024996 OMA:ASNVIMI ProtClustDB:CLSK828188
BioCyc:GSUL243231:GH27-1119-MONOMER Uniprot:Q74E47
Length = 127
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/99 (25%), Positives = 62/99 (62%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V +V NG +A L+ ++++++T++ MP ++GI LR++ +K+ VIM++++
Sbjct: 33 VASVSNGFEALNYLQQR--EVNVIVTDINMPEMNGITFLREL--NKSFPRSNVIMITAYG 88
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK-CH 100
+ + ++ GA ++ KP++ +EL+++ ++++ CH
Sbjct: 89 GVESYIEAMNLGAFEYINKPVKLDELKSILTKIFKESCH 127
>UNIPROTKB|E1WEB4 [details] [associations]
symbol:cpxR "Two-component response regulatory protein"
species:216597 "Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 OMA:YQTPVIM EMBL:FQ312003 GenomeReviews:FQ312003_GR
RefSeq:YP_005183876.1 ProteinModelPortal:E1WEB4 IntAct:E1WEB4
PRIDE:E1WEB4 GeneID:11767742 KEGG:sey:SL1344_4008 PATRIC:43194339
Uniprot:E1WEB4
Length = 232
Score = 105 (42.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKI-MNHKTCKNIPVIMMSSH 61
V+ +G QA ++L+D IDL+L +V+MP +GI L+ + H+T PVIM+++
Sbjct: 28 VLVAHDGEQALELLDD---SIDLLLLDVMMPKKNGIDTLKALRQTHQT----PVIMLTAR 80
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRKCH 100
S L GA +L KP EL + + R+ H
Sbjct: 81 GSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSH 119
Score = 34 (17.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 145 QDGSDNGSGT 154
Q SDNGS T
Sbjct: 124 QQSSDNGSPT 133
>TIGR_CMR|CJE_1261 [details] [associations]
symbol:CJE_1261 "chemotaxis protein CheY" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413
OMA:DVLITDW ProtClustDB:CLSK872349 RefSeq:YP_179249.1
ProteinModelPortal:Q5HTY6 STRING:Q5HTY6 GeneID:3231768
KEGG:cjr:CJE1261 PATRIC:20044318
BioCyc:CJEJ195099:GJC0-1287-MONOMER Uniprot:Q5HTY6
Length = 130
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/93 (26%), Positives = 53/93 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ E+G++AW +L D + +++T+ MP ++G+ L++K+ K +++P+IM+++
Sbjct: 28 VLEAEHGVEAWDLLTKNED-VKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEG 86
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHV 95
+ V L G ++VKP L+ + V
Sbjct: 87 GKAEVITALKAGVNNYIVKPFTPQVLKEKLEDV 119
>UNIPROTKB|P71403 [details] [associations]
symbol:cheY "Chemotaxis protein CheY homolog" species:85962
"Helicobacter pylori 26695" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AE000511
GenomeReviews:AE000511_GR GO:GO:0001539 KO:K03413 EMBL:X81897
EMBL:U97567 EMBL:AF021090 PIR:C64653 RefSeq:NP_207858.1
RefSeq:YP_006934983.1 PDB:3GWG PDB:3H1E PDB:3H1F PDB:3H1G
PDBsum:3GWG PDBsum:3H1E PDBsum:3H1F PDBsum:3H1G
ProteinModelPortal:P71403 DIP:DIP-3256N MINT:MINT-160671
GeneID:13870261 GeneID:899603 KEGG:heo:C694_05515 KEGG:hpy:HP1067
PATRIC:20593473 OMA:DVLITDW ProtClustDB:CLSK872349
EvolutionaryTrace:P71403 Uniprot:P71403
Length = 124
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 25/87 (28%), Positives = 50/87 (57%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ E+G++AW+ L+ D +++T+ MP ++G+ L++K+ + K IP+IM+++
Sbjct: 28 VLEAEHGVEAWEKLDANADT-KVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEG 86
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQ 89
+ V L G ++VKP L+
Sbjct: 87 GKAEVITALKAGVNNYIVKPFTPQVLK 113
>UNIPROTKB|Q1DF43 [details] [associations]
symbol:MXAN_0460 "Response regulator" species:246197
"Myxococcus xanthus DK 1622" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:CP000113 GenomeReviews:CP000113_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
RefSeq:YP_628730.1 ProteinModelPortal:Q1DF43 IntAct:Q1DF43
STRING:Q1DF43 GeneID:4103270 KEGG:mxa:MXAN_0460 PATRIC:22643509
HOGENOM:HOG000025389 OMA:NLELEGH ProtClustDB:CLSK955207
BioCyc:MXAN246197:GIWU-455-MONOMER Uniprot:Q1DF43
Length = 255
Score = 121 (47.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ NG +A ++LE +D+VLT++ MP L G+ LLR+I + ++PV++M++
Sbjct: 36 VLEAANGEEALRLLEK--QSVDVVLTDIRMPGLHGVELLRRIKQERP--DMPVVLMTAFT 91
Query: 63 SMSIVFKCLSKGAVYFLVKP 82
+ +V L++GA L KP
Sbjct: 92 AEELVDDALAEGAFTVLPKP 111
>TIGR_CMR|BA_4394 [details] [associations]
symbol:BA_4394 "stage 0 sporulation protein A"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0030436 "asexual sporulation" evidence=ISS]
InterPro:IPR001789 InterPro:IPR012052 InterPro:IPR014879
InterPro:IPR016032 Pfam:PF00072 Pfam:PF08769 PIRSF:PIRSF002937
ProDom:PD010908 PROSITE:PS50110 SMART:SM00448 GO:GO:0005737
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0005509 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0030435
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
SUPFAM:SSF46894 GO:GO:0042173 GO:GO:0050906 EMBL:U09970 PIR:S60868
RefSeq:NP_846624.1 RefSeq:YP_021039.2 RefSeq:YP_030326.1
ProteinModelPortal:P52928 SMR:P52928 DNASU:1087648
EnsemblBacteria:EBBACT00000009270 EnsemblBacteria:EBBACT00000018747
EnsemblBacteria:EBBACT00000019258 GeneID:1087648 GeneID:2814788
GeneID:2852644 KEGG:ban:BA_4394 KEGG:bar:GBAA_4394 KEGG:bat:BAS4076
HOGENOM:HOG000057639 KO:K07699 OMA:RGKPTNS ProtClustDB:CLSK873420
BioCyc:BANT260799:GJAJ-4133-MONOMER
BioCyc:BANT261594:GJ7F-4276-MONOMER TIGRFAMs:TIGR02875
Uniprot:P52928
Length = 264
Score = 121 (47.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 1 MAVIAVE-NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMS 59
M VI NG + +L+D Q D+++ +++MP L G+ +L K+ + + + VIM++
Sbjct: 29 MEVIGTAYNGQECLNLLKD--KQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQPSVIMLT 86
Query: 60 SHDSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHV 95
+ + K + GA YF++KP +++NL H+
Sbjct: 87 AFGQEDVTKKAVDLGASYFILKPF---DMENLTSHI 119
>TIGR_CMR|GSU_2574 [details] [associations]
symbol:GSU_2574 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 Pfam:PF01966
PROSITE:PS50110 SMART:SM00448 SMART:SM00471 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0008152 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0008081
Gene3D:1.10.3210.10 HOGENOM:HOG000266481 RefSeq:NP_953620.1
ProteinModelPortal:Q74A17 GeneID:2686365 KEGG:gsu:GSU2574
PATRIC:22028001 KO:K07814 OMA:HTRRISE ProtClustDB:CLSK746108
BioCyc:GSUL243231:GH27-2551-MONOMER Uniprot:Q74A17
Length = 368
Score = 123 (48.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 35/96 (36%), Positives = 52/96 (54%)
Query: 4 IAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
I +NGL+A ++L D IDL+L ++ MP L+G L + H +IPVI++++ S
Sbjct: 31 ITAQNGLEALRVL-DKNSAIDLILLDLEMPELNGFATLATLKKHPLWCDIPVIVLTA--S 87
Query: 64 MSIVFKCLSKGAVYFLVKPIRKNELQ-NLWQHVWRK 98
V + L GA FL KP EL+ + HV K
Sbjct: 88 KDEVTRTLRLGANDFLAKPYDTEELRLRVMNHVRAK 123
>UNIPROTKB|Q74AX6 [details] [associations]
symbol:cheY40H-1 "Response receiver CheY associated with
MCPs of class 40H" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_953272.2 ProteinModelPortal:Q74AX6 GeneID:2685646
KEGG:gsu:GSU2223 PATRIC:22027301 OMA:GANEYLV ProtClustDB:CLSK828765
BioCyc:GSUL243231:GH27-2170-MONOMER Uniprot:Q74AX6
Length = 121
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 27/89 (30%), Positives = 52/89 (58%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ +G +A ++L +++DL++T++ MP ++G+ L+ + ++IP+ ++S+
Sbjct: 29 VVEASSGFEALRLLP--RERLDLIITDINMPDINGLELVSFVRTSDNYRHIPLFIISTEG 86
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
S K LS GA +LVKP LQ+L
Sbjct: 87 SERDREKGLSLGANEYLVKPFDPARLQDL 115
>TIGR_CMR|GSU_2223 [details] [associations]
symbol:GSU_2223 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P06143 RefSeq:NP_953272.2 ProteinModelPortal:Q74AX6
GeneID:2685646 KEGG:gsu:GSU2223 PATRIC:22027301 OMA:GANEYLV
ProtClustDB:CLSK828765 BioCyc:GSUL243231:GH27-2170-MONOMER
Uniprot:Q74AX6
Length = 121
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 27/89 (30%), Positives = 52/89 (58%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ +G +A ++L +++DL++T++ MP ++G+ L+ + ++IP+ ++S+
Sbjct: 29 VVEASSGFEALRLLP--RERLDLIITDINMPDINGLELVSFVRTSDNYRHIPLFIISTEG 86
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
S K LS GA +LVKP LQ+L
Sbjct: 87 SERDREKGLSLGANEYLVKPFDPARLQDL 115
>TIGR_CMR|SPO_1953 [details] [associations]
symbol:SPO_1953 "phosphate regulon transcriptional
regulatory protein PhoB" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0006817 "phosphate ion transport" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0006817 HOGENOM:HOG000034819 KO:K07657
TIGRFAMs:TIGR02154 RefSeq:YP_167188.1 ProteinModelPortal:Q5LS17
GeneID:3193549 KEGG:sil:SPO1953 PATRIC:23377237 OMA:STLMEKP
ProtClustDB:CLSK933701 Uniprot:Q5LS17
Length = 229
Score = 116 (45.9 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI ENG +A ++++ D D+++ + +MP LSGI + R++ ++IPVIM+S+
Sbjct: 32 VIRAENGEEAMLLVDE--DTPDIIVLDWMMPNLSGIEVCRRLKTRPETRSIPVIMLSARS 89
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
+ L GA ++VKP EL
Sbjct: 90 EEVDKVRGLETGADDYVVKPYSVVEL 115
>TIGR_CMR|CHY_1018 [details] [associations]
symbol:CHY_1018 "chemotaxis response regulator"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 OMA:PFQAPKV
RefSeq:YP_359865.1 ProteinModelPortal:Q3ADB9 SMR:Q3ADB9
STRING:Q3ADB9 GeneID:3728492 KEGG:chy:CHY_1018 PATRIC:21275169
BioCyc:CHYD246194:GJCN-1017-MONOMER Uniprot:Q3ADB9
Length = 121
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/92 (28%), Positives = 52/92 (56%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
ENG QA ++ ++L D+V ++ MP + GI +R+I K N +IM S+ ++
Sbjct: 34 ENGAQAVEMYKELKP--DVVTMDITMPEMDGIQAVREIK--KIDPNAKIIMCSAMGQQAL 89
Query: 67 VFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
V + + GA+ F+VKP +++ + ++ ++
Sbjct: 90 VMEAIQAGAIDFIVKPFQQDRILQAFEKTLKR 121
>TIGR_CMR|CPS_1619 [details] [associations]
symbol:CPS_1619 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR009061
InterPro:IPR010093 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0000166 GO:GO:0035556 GO:GO:0003677
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745 SUPFAM:SSF46955
TIGRFAMs:TIGR01764 ProtClustDB:CLSK741041 RefSeq:YP_268357.1
ProteinModelPortal:Q485A8 STRING:Q485A8 GeneID:3520728
KEGG:cps:CPS_1619 PATRIC:21466431 HOGENOM:HOG000133916 OMA:DEYEIAM
BioCyc:CPSY167879:GI48-1696-MONOMER Uniprot:Q485A8
Length = 185
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
+G +A ++E + I + +++MP + G + + I +++ KN P+I MS +
Sbjct: 97 SGFEAGSMIEKIKPSI--IFLDLVMPDIDGFAVCKHIRSNEASKNTPIIAMSGLSQQENI 154
Query: 68 FKCLSKGAVYFLVKPIRKNELQ 89
K ++ GA FL+KPIR + L+
Sbjct: 155 EKVIASGANTFLMKPIRLSVLK 176
>TIGR_CMR|GSU_0104 [details] [associations]
symbol:GSU_0104 "response regulator, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P10957 RefSeq:NP_951166.1
ProteinModelPortal:Q74GY9 GeneID:2688136 KEGG:gsu:GSU0104
PATRIC:22022954 OMA:NVAVARD ProtClustDB:CLSK309460
BioCyc:GSUL243231:GH27-65-MONOMER Uniprot:Q74GY9
Length = 129
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQID--LVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSS 60
V+ +G QA L + +D LVL ++ +P ++G+ +LR I + + ++ PVI++SS
Sbjct: 31 VVVARDGEQAVGQLFEAAPPLDPWLVLLDLKLPKMNGLEVLRTIRSEERTRHTPVIVISS 90
Query: 61 HDSMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
+ V KC G + +L KPI ++ L
Sbjct: 91 SQEETDVVKCRELGVLAYLTKPIDGEKIMAL 121
>UNIPROTKB|Q9KS16 [details] [associations]
symbol:VC_1445 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198 RefSeq:NP_231088.1
ProteinModelPortal:Q9KS16 DNASU:2614077 GeneID:2614077
KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS ProtClustDB:CLSK874379
Uniprot:Q9KS16
Length = 572
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V ENGLQA ++LE DLVL ++ MP + GI KI+ K + IP+I +++H
Sbjct: 480 VTIAENGLQAVELLEK-NHVFDLVLMDISMPIMDGIAAT-KILRDKHIE-IPIIALTAHT 536
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
+ S C+ G ++KPIR ++ +
Sbjct: 537 AGSDKQNCIDAGMNDIVLKPIRSKDIMEV 565
>TIGR_CMR|VC_1445 [details] [associations]
symbol:VC_1445 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198
RefSeq:NP_231088.1 ProteinModelPortal:Q9KS16 DNASU:2614077
GeneID:2614077 KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS
ProtClustDB:CLSK874379 Uniprot:Q9KS16
Length = 572
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V ENGLQA ++LE DLVL ++ MP + GI KI+ K + IP+I +++H
Sbjct: 480 VTIAENGLQAVELLEK-NHVFDLVLMDISMPIMDGIAAT-KILRDKHIE-IPIIALTAHT 536
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
+ S C+ G ++KPIR ++ +
Sbjct: 537 AGSDKQNCIDAGMNDIVLKPIRSKDIMEV 565
>TIGR_CMR|BA_0996 [details] [associations]
symbol:BA_0996 "sensor histidine kinase/response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR003018 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF02518 Pfam:PF13185 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00065 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 KO:K03407
HSSP:P52934 RefSeq:NP_843497.1 RefSeq:YP_017624.1
RefSeq:YP_027206.1 ProteinModelPortal:Q81U88 DNASU:1088076
EnsemblBacteria:EBBACT00000011936 EnsemblBacteria:EBBACT00000016656
EnsemblBacteria:EBBACT00000023286 GeneID:1088076 GeneID:2814798
GeneID:2849014 KEGG:ban:BA_0996 KEGG:bar:GBAA_0996 KEGG:bat:BAS0932
HOGENOM:HOG000084747 OMA:TNNVFQE ProtClustDB:CLSK916050
BioCyc:BANT260799:GJAJ-1010-MONOMER
BioCyc:BANT261594:GJ7F-1055-MONOMER InterPro:IPR007891 Pfam:PF05227
Uniprot:Q81U88
Length = 896
Score = 123 (48.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/94 (29%), Positives = 54/94 (57%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
+I +NGL+ +IL++ + IDL+L +++MP + G + I + IP+I +++
Sbjct: 802 IITAQNGLECLEILKNNTN-IDLILMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKA 860
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVW 96
+ KCLS GA ++ KP+ ++L ++ VW
Sbjct: 861 MPNDKEKCLSAGASDYISKPLNLHQLYSVMS-VW 893
>UNIPROTKB|Q9KS62 [details] [associations]
symbol:VC_1398 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413
OMA:AGANFYL HSSP:P06143 PIR:F82205 RefSeq:NP_231041.1
ProteinModelPortal:Q9KS62 DNASU:2614030 GeneID:2614030
KEGG:vch:VC1398 PATRIC:20081860 ProtClustDB:CLSK794124
Uniprot:Q9KS62
Length = 124
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 3 VIAVENGLQAWKILEDLMDQ-IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
++ NG++A LE ++ +DL L ++ MP + G L+R+I IP +M+S+
Sbjct: 29 ILEASNGVEA---LERALEMPVDLFLVDINMPKMDGFTLVREIRCRPELAGIPTVMISTE 85
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQ 89
S + + GA ++VKP+ ELQ
Sbjct: 86 SQESDRQQGIHMGANLYMVKPVNPEELQ 113
>TIGR_CMR|VC_1398 [details] [associations]
symbol:VC_1398 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413 OMA:AGANFYL
HSSP:P06143 PIR:F82205 RefSeq:NP_231041.1 ProteinModelPortal:Q9KS62
DNASU:2614030 GeneID:2614030 KEGG:vch:VC1398 PATRIC:20081860
ProtClustDB:CLSK794124 Uniprot:Q9KS62
Length = 124
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 3 VIAVENGLQAWKILEDLMDQ-IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
++ NG++A LE ++ +DL L ++ MP + G L+R+I IP +M+S+
Sbjct: 29 ILEASNGVEA---LERALEMPVDLFLVDINMPKMDGFTLVREIRCRPELAGIPTVMISTE 85
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQ 89
S + + GA ++VKP+ ELQ
Sbjct: 86 SQESDRQQGIHMGANLYMVKPVNPEELQ 113
>TIGR_CMR|BA_0994 [details] [associations]
symbol:BA_0994 "response regulator" species:198094
"Bacillus anthracis str. Ames" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR001932 Pfam:PF00072 Pfam:PF07228 PROSITE:PS50110
SMART:SM00331 SMART:SM00448 GO:GO:0003824 GO:GO:0006355
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008152 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF81606 HSSP:Q9A5I4
OMA:ERKWGDL RefSeq:NP_843495.1 RefSeq:YP_017622.1
RefSeq:YP_027204.1 ProteinModelPortal:Q81U90 DNASU:1088940
EnsemblBacteria:EBBACT00000010036 EnsemblBacteria:EBBACT00000013718
EnsemblBacteria:EBBACT00000020226 GeneID:1088940 GeneID:2814732
GeneID:2850195 KEGG:ban:BA_0994 KEGG:bar:GBAA_0994 KEGG:bat:BAS0930
HOGENOM:HOG000084736 ProtClustDB:CLSK916048
BioCyc:BANT260799:GJAJ-1008-MONOMER
BioCyc:BANT261594:GJ7F-1053-MONOMER Uniprot:Q81U90
Length = 380
Score = 117 (46.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 21/68 (30%), Positives = 45/68 (66%)
Query: 21 DQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLV 80
++IDL+L +++MP + G+ + R++ + K+IP+I +++ + + + + L GA+ ++
Sbjct: 51 NEIDLILLDIMMPEIDGLEVCRRLQKEEKFKDIPIIFVTALEDANKLAEALDIGAMDYIT 110
Query: 81 KPIRKNEL 88
KPI K EL
Sbjct: 111 KPINKVEL 118
>TIGR_CMR|GSU_0008 [details] [associations]
symbol:GSU_0008 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR013656 Pfam:PF08448
HSSP:P06143 RefSeq:NP_951070.1 ProteinModelPortal:Q74H84
GeneID:2688683 KEGG:gsu:GSU0008 PATRIC:22022753
HOGENOM:HOG000135130 OMA:HRFEAGR ProtClustDB:CLSK924354
BioCyc:GSUL243231:GH27-8-MONOMER Uniprot:Q74H84
Length = 516
Score = 118 (46.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
+G++A LE + DLVL ++ MP + GI +L +I + ++ VIMM++H S I
Sbjct: 35 DGIEALDALE--RESFDLVLLDIRMPRMDGIEVLERIRDR--WPDLVVIMMTAHGSEDIA 90
Query: 68 FKCLSKGAVYFLVKPIRKNELQ 89
+ + KGAV ++ KP ++++
Sbjct: 91 VEAMKKGAVDYISKPFSSDDMK 112
>TIGR_CMR|GSU_1891 [details] [associations]
symbol:GSU_1891 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 Pfam:PF01966
PROSITE:PS50110 SMART:SM00448 SMART:SM00471 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0008152 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0008081
Gene3D:1.10.3210.10 HOGENOM:HOG000266481 HSSP:P06143
RefSeq:NP_952940.1 ProteinModelPortal:Q74BY7 GeneID:2688472
KEGG:gsu:GSU1891 PATRIC:22026647 OMA:FATIRTH ProtClustDB:CLSK924546
BioCyc:GSUL243231:GH27-1919-MONOMER Uniprot:Q74BY7
Length = 379
Score = 116 (45.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 22/60 (36%), Positives = 42/60 (70%)
Query: 23 IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKP 82
ID+V+T++ MP ++GI +LR I K+ ++PVI+M+ + +S+ + + +GA F++KP
Sbjct: 51 IDIVITDINMPEMTGIEVLRAI--RKSNPDVPVILMTGYAELSVAVEAIKQGAFDFIIKP 108
>UNIPROTKB|Q8ECB3 [details] [associations]
symbol:flrC "Two component signal transduction system
controlling flagella biosynthesis Sigma54-dependent response
regulator FlrC" species:211586 "Shewanella oneidensis MR-1"
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0030092 "regulation of flagellum assembly" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382
SMART:SM00448 GO:GO:0005524 GO:GO:0019861 GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000058489 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00676 PROSITE:PS00688 GO:GO:0001539 GO:GO:0030092
KO:K10943 ProtClustDB:CLSK874687 HSSP:P41789 RefSeq:NP_718785.1
ProteinModelPortal:Q8ECB3 GeneID:1170922 KEGG:son:SO_3230
PATRIC:23526142 OMA:NWPNLPV Uniprot:Q8ECB3
Length = 446
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 4 IAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
I V +G +A IL Q DLV+++V MP + G+GLL + H +PV++M+++ +
Sbjct: 31 IDVASGEEA--ILALKQHQFDLVISDVQMPGIGGLGLLNYLQQHHP--KLPVLLMTAYAT 86
Query: 64 MSIVFKCLSKGAVYFLVKPIRKNELQN 90
+ + GAV +L KP L N
Sbjct: 87 IGSAVSAIKLGAVDYLAKPFAPEVLLN 113
>TIGR_CMR|SO_3230 [details] [associations]
symbol:SO_3230 "flagellar regulatory protein C"
species:211586 "Shewanella oneidensis MR-1" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0030092 "regulation
of flagellum assembly" evidence=ISS] InterPro:IPR001789
InterPro:IPR002078 InterPro:IPR002197 InterPro:IPR003593
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158 Pfam:PF02954
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0019861 GO:GO:0035556 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025943 InterPro:IPR025944 PROSITE:PS00676
PROSITE:PS00688 GO:GO:0001539 GO:GO:0030092 KO:K10943
ProtClustDB:CLSK874687 HSSP:P41789 RefSeq:NP_718785.1
ProteinModelPortal:Q8ECB3 GeneID:1170922 KEGG:son:SO_3230
PATRIC:23526142 OMA:NWPNLPV Uniprot:Q8ECB3
Length = 446
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 4 IAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
I V +G +A IL Q DLV+++V MP + G+GLL + H +PV++M+++ +
Sbjct: 31 IDVASGEEA--ILALKQHQFDLVISDVQMPGIGGLGLLNYLQQHHP--KLPVLLMTAYAT 86
Query: 64 MSIVFKCLSKGAVYFLVKPIRKNELQN 90
+ + GAV +L KP L N
Sbjct: 87 IGSAVSAIKLGAVDYLAKPFAPEVLLN 113
>TIGR_CMR|CPS_0681 [details] [associations]
symbol:CPS_0681 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 RefSeq:YP_267431.1 ProteinModelPortal:Q488T3
STRING:Q488T3 GeneID:3522148 KEGG:cps:CPS_0681 PATRIC:21464685
BioCyc:CPSY167879:GI48-768-MONOMER Uniprot:Q488T3
Length = 246
Score = 109 (43.4 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH-DSMSIVFKCLSKGAVYFLVKP 82
D+VL +V++P L+GI + R I H+ K +P+IM+++ D V L GA +++KP
Sbjct: 47 DIVLLDVMLPGLNGIEVCRLIRQHEQSKQVPIIMLTARADEFDEVIG-LEAGADDYVIKP 105
Query: 83 IRKNEL 88
+R L
Sbjct: 106 VRPRAL 111
>UNIPROTKB|Q74DM7 [details] [associations]
symbol:cheY34H-1 "Response receiver CheY associated with
MCPs of class 34H" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P08402
RefSeq:NP_952342.1 ProteinModelPortal:Q74DM7 GeneID:2688101
KEGG:gsu:GSU1289 PATRIC:22025351 OMA:FDVTEAC ProtClustDB:CLSK828284
BioCyc:GSUL243231:GH27-1257-MONOMER Uniprot:Q74DM7
Length = 121
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 20/67 (29%), Positives = 42/67 (62%)
Query: 22 QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVK 81
++D+V+T++ MP L GIGL++ + + T + P++M+++ S + + GA ++VK
Sbjct: 46 RVDMVITDLNMPNLDGIGLIKGVRANPTYRFTPIVMLTTESQESRKQEGKAAGATGWIVK 105
Query: 82 PIRKNEL 88
P + +L
Sbjct: 106 PFKPEQL 112
>TIGR_CMR|GSU_1289 [details] [associations]
symbol:GSU_1289 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P08402 RefSeq:NP_952342.1 ProteinModelPortal:Q74DM7
GeneID:2688101 KEGG:gsu:GSU1289 PATRIC:22025351 OMA:FDVTEAC
ProtClustDB:CLSK828284 BioCyc:GSUL243231:GH27-1257-MONOMER
Uniprot:Q74DM7
Length = 121
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 20/67 (29%), Positives = 42/67 (62%)
Query: 22 QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVK 81
++D+V+T++ MP L GIGL++ + + T + P++M+++ S + + GA ++VK
Sbjct: 46 RVDMVITDLNMPNLDGIGLIKGVRANPTYRFTPIVMLTTESQESRKQEGKAAGATGWIVK 105
Query: 82 PIRKNEL 88
P + +L
Sbjct: 106 PFKPEQL 112
>TIGR_CMR|GSU_2287 [details] [associations]
symbol:GSU_2287 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953336.1 ProteinModelPortal:Q74AR5 GeneID:2686930
KEGG:gsu:GSU2287 PATRIC:22027433 OMA:HERDMEA
BioCyc:GSUL243231:GH27-2270-MONOMER Uniprot:Q74AR5
Length = 136
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 25/90 (27%), Positives = 53/90 (58%)
Query: 6 VENGLQAWKILEDLMDQID--LVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
V++G++A + L +++ VL ++ +P + G+ +LR++ + ++IPV++++S D
Sbjct: 38 VKDGVEALRYLTVAENRVPPRFVLLDLKLPRVDGVDVLREMRKREETRDIPVVVLTSSDH 97
Query: 64 MSIVFKCLSKGAVYFLVKPI---RKNELQN 90
+ C GA +FL KP+ R +E+ N
Sbjct: 98 ERDMEACGKLGAAHFLQKPLDAGRMSEVLN 127
>TIGR_CMR|CHY_2047 [details] [associations]
symbol:CHY_2047 "DNA-binding response regulator"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 RefSeq:YP_360866.1
ProteinModelPortal:Q3AAG8 SMR:Q3AAG8 STRING:Q3AAG8 GeneID:3727851
KEGG:chy:CHY_2047 PATRIC:21277175 KO:K07658 OMA:WGYEFSG
ProtClustDB:CLSK2772343 BioCyc:CHYD246194:GJCN-2046-MONOMER
Uniprot:Q3AAG8
Length = 231
Score = 107 (42.7 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 25/86 (29%), Positives = 49/86 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ +G++A +I++ + DLV+ ++++P +SG+ + + I N++ IP+IM+S+
Sbjct: 27 VLEAYDGIRALEIVKKELP--DLVILDIMLPGMSGLEVCKNIRNNEKTAEIPIIMLSARG 84
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
L GA ++VKP EL
Sbjct: 85 EEVDKILGLELGADDYMVKPFSPREL 110
>TAIR|locus:2141020 [details] [associations]
symbol:APRR2 species:3702 "Arabidopsis thaliana"
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA;ISS] [GO:0000160 "phosphorelay signal transduction
system" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL021889
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB041531
EMBL:AF385725 EMBL:AY143963 IPI:IPI00524902 IPI:IPI00542892
PIR:T05088 RefSeq:NP_001078405.1 RefSeq:NP_001154250.1
RefSeq:NP_001190759.1 RefSeq:NP_567548.1 RefSeq:NP_849403.1
RefSeq:NP_849404.2 UniGene:At.25394 ProteinModelPortal:Q6LA43
SMR:Q6LA43 IntAct:Q6LA43 STRING:Q6LA43 EnsemblPlants:AT4G18020.1
EnsemblPlants:AT4G18020.2 EnsemblPlants:AT4G18020.3
EnsemblPlants:AT4G18020.6 GeneID:827527 KEGG:ath:AT4G18020
GeneFarm:4314 TAIR:At4g18020 eggNOG:NOG268152 HOGENOM:HOG000005909
InParanoid:Q6LA43 OMA:TIMISTD PhylomeDB:Q6LA43
ProtClustDB:CLSN2689492 Genevestigator:Q6LA43 GermOnline:AT4G18020
Uniprot:Q6LA43
Length = 535
Score = 113 (44.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 53 IPVIMMSSHDSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+P IM+S+ ++ KC++ GAV FL KP+ +L+N+WQHV K
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHK 141
>UNIPROTKB|Q48P87 [details] [associations]
symbol:pilG "Type IV pilus response regulator PilG"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0009297 "pilus assembly" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 GO:GO:0009297
RefSeq:YP_272782.1 ProteinModelPortal:Q48P87 STRING:Q48P87
GeneID:3558225 KEGG:psp:PSPPH_0479 PATRIC:19969990 KO:K02657
OMA:CDILMPR ProtClustDB:CLSK821914 Uniprot:Q48P87
Length = 136
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI +G A + D +I + +++MP L G I N++ K+ PVIM+SS D
Sbjct: 34 VITAIDGFDALAKIADNHPRI--IFVDIMMPRLDGYQTCALIKNNRAFKSTPVIMLSSKD 91
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
+ K G+ FL KP K EL
Sbjct: 92 GLFDKAKGRIVGSDQFLTKPFSKEEL 117
>TIGR_CMR|BA_3067 [details] [associations]
symbol:BA_3067 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P06628
RefSeq:NP_845397.1 RefSeq:YP_019708.1 RefSeq:YP_029111.1
ProteinModelPortal:Q81NV5 DNASU:1088217
EnsemblBacteria:EBBACT00000009080 EnsemblBacteria:EBBACT00000017281
EnsemblBacteria:EBBACT00000021032 GeneID:1088217 GeneID:2817324
GeneID:2850761 KEGG:ban:BA_3067 KEGG:bar:GBAA_3067 KEGG:bat:BAS2853
OMA:LTKEHFF ProtClustDB:CLSK886597
BioCyc:BANT260799:GJAJ-2916-MONOMER
BioCyc:BANT261594:GJ7F-3019-MONOMER Uniprot:Q81NV5
Length = 223
Score = 106 (42.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 14 KILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSK 73
K+L D++ +IDLV+ +V++P G + +KI N NIP+I +S+ + M K L+
Sbjct: 38 KVL-DIIHEIDLVVMDVMLPGEDGYQITKKIKNLGL--NIPIIFLSARNDMDSKLKGLTI 94
Query: 74 GAVYFLVKPIRKNEL 88
G Y ++KP EL
Sbjct: 95 GEEY-MIKPFDPREL 108
>UNIPROTKB|Q9KT55 [details] [associations]
symbol:VC_1050 "Response regulator" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0035556
"intracellular signal transduction" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 OMA:MICDLAM
HSSP:Q56312 PIR:A82249 RefSeq:NP_230695.1 ProteinModelPortal:Q9KT55
DNASU:2614320 GeneID:2614320 KEGG:vch:VC1050 PATRIC:20081198
ProtClustDB:CLSK874195 Uniprot:Q9KT55
Length = 368
Score = 110 (43.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI ENGL + L D + DL+L ++ MP L+GI + ++ + + ++P++++S+ +
Sbjct: 51 VIEAENGLDGLRKLRD--HEPDLILCDLSMPVLNGIEFVEEVSS--SYPSLPLVVVSATE 106
Query: 63 SMSIVFKCLSKGAVYFLVKPI 83
M+ V K L G FL KPI
Sbjct: 107 EMADVAKALRFGIKDFLPKPI 127
>TIGR_CMR|VC_1050 [details] [associations]
symbol:VC_1050 "response regulator" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 OMA:MICDLAM HSSP:Q56312
PIR:A82249 RefSeq:NP_230695.1 ProteinModelPortal:Q9KT55
DNASU:2614320 GeneID:2614320 KEGG:vch:VC1050 PATRIC:20081198
ProtClustDB:CLSK874195 Uniprot:Q9KT55
Length = 368
Score = 110 (43.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI ENGL + L D + DL+L ++ MP L+GI + ++ + + ++P++++S+ +
Sbjct: 51 VIEAENGLDGLRKLRD--HEPDLILCDLSMPVLNGIEFVEEVSS--SYPSLPLVVVSATE 106
Query: 63 SMSIVFKCLSKGAVYFLVKPI 83
M+ V K L G FL KPI
Sbjct: 107 EMADVAKALRFGIKDFLPKPI 127
>UNIPROTKB|Q1D948 [details] [associations]
symbol:MXAN_2606 "Sensor histidine kinase/response
regulator" species:246197 "Myxococcus xanthus DK 1622" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0023014
EMBL:CP000113 GenomeReviews:CP000113_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 RefSeq:YP_630825.1
ProteinModelPortal:Q1D948 IntAct:Q1D948 STRING:Q1D948
GeneID:4101819 KEGG:mxa:MXAN_2606 PATRIC:22647741 OMA:EMEIEIY
ProtClustDB:CLSK955309 BioCyc:MXAN246197:GIWU-2583-MONOMER
Uniprot:Q1D948
Length = 970
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 19 LMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYF 78
L ++ DL+L++V+MP +SG+ +L + N +IPVI++++ ++ + L GA +
Sbjct: 637 LRERPDLILSDVMMPVMSGLQMLTALRNDPQTVDIPVILLTARQEVTAKVEGLGTGANDY 696
Query: 79 LVKPIRKNEL 88
L KP NEL
Sbjct: 697 LGKPFSPNEL 706
>UNIPROTKB|P06534 [details] [associations]
symbol:spo0A "Stage 0 sporulation protein A" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0000917 "barrier
septum assembly" evidence=IGI] [GO:0008356 "asymmetric cell
division" evidence=IGI] [GO:0045881 "positive regulation of
sporulation resulting in formation of a cellular spore"
evidence=IGI] InterPro:IPR001789 InterPro:IPR012052
InterPro:IPR014879 InterPro:IPR016032 Pfam:PF00072 Pfam:PF08769
PIRSF:PIRSF002937 ProDom:PD010908 PROSITE:PS50110 SMART:SM00448
GO:GO:0005737 GO:GO:0035556 GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0030435 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0045881
GO:GO:0000917 GO:GO:0008356 SUPFAM:SSF46894 EMBL:D84432
GO:GO:0050906 EMBL:U68235 HOGENOM:HOG000057639 KO:K07699
OMA:RGKPTNS ProtClustDB:CLSK873420 TIGRFAMs:TIGR02875 EMBL:M10082
EMBL:M23656 PIR:A94036 RefSeq:NP_390302.1 PDB:1LQ1 PDBsum:1LQ1
ProteinModelPortal:P06534 SMR:P06534
EnsemblBacteria:EBBACT00000000284 GeneID:938655 KEGG:bsu:BSU24220
PATRIC:18976676 GenoList:BSU24220 BioCyc:BSUB:BSU24220-MONOMER
EvolutionaryTrace:P06534 Uniprot:P06534
Length = 267
Score = 107 (42.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/96 (28%), Positives = 52/96 (54%)
Query: 1 MAVIAVE-NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMS 59
M VI V NG + + ++ D D+++ +++MP L G+ +L ++ K VIM++
Sbjct: 29 MEVIGVAYNGQECLSLFKE-KDP-DVLVLDIIMPHLDGLAVLERLRESDLKKQPNVIMLT 86
Query: 60 SHDSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHV 95
+ + K + GA YF++KP +++NL H+
Sbjct: 87 AFGQEDVTKKAVDLGASYFILKPF---DMENLVGHI 119
>TAIR|locus:2199342 [details] [associations]
symbol:APRR6 "pseudo-response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC016447 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557 KO:K14491
IPI:IPI00522591 IPI:IPI01020037 PIR:E96705 RefSeq:NP_176988.4
UniGene:At.52431 ProteinModelPortal:Q9C9F6 SMR:Q9C9F6 PaxDb:Q9C9F6
PRIDE:Q9C9F6 GeneID:843150 KEGG:ath:AT1G68210 GeneFarm:4346
TAIR:At1g68210 eggNOG:NOG320519 OMA:IANIEMP Genevestigator:Q9C9F6
Uniprot:Q9C9F6
Length = 755
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/96 (27%), Positives = 52/96 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V++V+ +A ++E +I L++ + MP + L ++ K+IP+I+++
Sbjct: 39 VMSVDVASKALSMIEKQKKEIGLIIANIEMPHIDSHSFLNALL----LKDIPLILINPEI 94
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
L+K A + L KPI ++++N+WQHV+ K
Sbjct: 95 KTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSK 130
>UNIPROTKB|P14375 [details] [associations]
symbol:zraR species:83333 "Escherichia coli K-12"
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;IGI;IEP;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IDA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA;IDA] InterPro:IPR001789
InterPro:IPR002078 InterPro:IPR002197 InterPro:IPR003593
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158 Pfam:PF02954
PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382
SMART:SM00448 GO:GO:0005524 GO:GO:0005737 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:U00006 GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
HOGENOM:HOG000058487 EMBL:M28369 PIR:G65207 RefSeq:NP_418432.1
RefSeq:YP_491456.1 ProteinModelPortal:P14375 SMR:P14375
DIP:DIP-9980N PRIDE:P14375 EnsemblBacteria:EBESCT00000003356
EnsemblBacteria:EBESCT00000015912 GeneID:12933469 GeneID:948505
KEGG:ecj:Y75_p3192 KEGG:eco:b4004 PATRIC:32123533 EchoBASE:EB0477
EcoGene:EG10482 KO:K07713 OMA:AEVNAGH ProtClustDB:PRK10365
BioCyc:EcoCyc:HYDG-MONOMER BioCyc:ECOL316407:JW3968-MONOMER
Genevestigator:P14375 Uniprot:P14375
Length = 441
Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 4 IAVEN-GLQAWKILEDLMDQI-DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
+A+ N G QA LE + +Q+ DLVL +V M + GI L++I IPV++M+++
Sbjct: 32 VALANSGRQA---LEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPA--IPVLIMTAY 86
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQ 89
S+ + L GA+ +L+KP+ + LQ
Sbjct: 87 SSVETAVEALKTGALDYLIKPLDFDNLQ 114
>UNIPROTKB|Q1CXR3 [details] [associations]
symbol:difD "Fibril biogenesis regulator DifD"
species:246197 "Myxococcus xanthus DK 1622" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:CP000113 GenomeReviews:CP000113_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_634810.1
ProteinModelPortal:Q1CXR3 SMR:Q1CXR3 IntAct:Q1CXR3 STRING:Q1CXR3
GeneID:4104566 KEGG:mxa:MXAN_6693 PATRIC:22655877 OMA:PFQAPKV
ProtClustDB:CLSK947176 BioCyc:MXAN246197:GIWU-6635-MONOMER
Uniprot:Q1CXR3
Length = 122
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
NGL+A + ++L DL +++MP SGI R+I+ K + VIM S+ S+V
Sbjct: 35 NGLEAVEKYKELKP--DLTTMDIVMPFKSGIEATREII--KADSSAVVIMCSALGQESLV 90
Query: 68 FKCLSKGAVYFLVKPIRKNEL 88
+ + GA F+VKP R ++
Sbjct: 91 MEAIEAGASDFIVKPFRAEDV 111
>UNIPROTKB|P0AE88 [details] [associations]
symbol:cpxR "CpxR transcriptional dual regulator"
species:83333 "Escherichia coli K-12" [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0035556 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:L19201
eggNOG:COG0745 HOGENOM:HOG000034819 EMBL:M36795 EMBL:X13307
EMBL:L14579 PIR:C65197 RefSeq:NP_418348.1 RefSeq:YP_491538.1
ProteinModelPortal:P0AE88 SMR:P0AE88 DIP:DIP-47991N IntAct:P0AE88
MINT:MINT-1292432 PaxDb:P0AE88 EnsemblBacteria:EBESCT00000002313
EnsemblBacteria:EBESCT00000017066 GeneID:12933651 GeneID:948404
KEGG:ecj:Y75_p3274 KEGG:eco:b3912 PATRIC:32123337 EchoBASE:EB0019
EcoGene:EG10020 KO:K07662 OMA:YQTPVIM ProtClustDB:PRK10955
BioCyc:EcoCyc:CPXR-MONOMER BioCyc:ECOL316407:JW3883-MONOMER
Genevestigator:P0AE88 Uniprot:P0AE88
Length = 232
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKI-MNHKTCKNIPVIMMSSH 61
VI +G QA +L+D IDL+L +V+MP +GI L+ + H+T PVIM+++
Sbjct: 28 VIVAHDGEQALDLLDD---SIDLLLLDVMMPKKNGIDTLKALRQTHQT----PVIMLTAR 80
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRKCH 100
S L GA +L KP EL + + R+ H
Sbjct: 81 GSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSH 119
>TIGR_CMR|SO_1416 [details] [associations]
symbol:SO_1416 "DNA-binding response regulator"
species:211586 "Shewanella oneidensis MR-1" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000792 InterPro:IPR001789 Pfam:PF00072 Pfam:PF00196
PRINTS:PR00038 PROSITE:PS50043 PROSITE:PS50110 SMART:SM00421
SMART:SM00448 GO:GO:0035556 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034813 HSSP:P41789
RefSeq:NP_717036.1 ProteinModelPortal:Q8EH15 GeneID:1169235
KEGG:son:SO_1416 PATRIC:23522484 OMA:WMLEGMG ProtClustDB:CLSK906253
Uniprot:Q8EH15
Length = 199
Score = 103 (41.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 25 LVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPIR 84
++L ++ MP + G+ LL + ++ I VIM++ H ++++ C+ +GA+ FL KP+
Sbjct: 48 VLLLDIKMPGMDGVALLNHLNQAQSA--ISVIMLTGHGTIAMAVDCIQQGALNFLEKPVD 105
Query: 85 KNELQNLW----QHVWRKCH 100
+L L QH +K H
Sbjct: 106 GEKLFQLLTQAQQHTEQKWH 125
>UNIPROTKB|Q485M3 [details] [associations]
symbol:flrC "Flagellar regulatory protein C" species:167879
"Colwellia psychrerythraea 34H" [GO:0001539 "ciliary or flagellar
motility" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0030092 "regulation of flagellum assembly"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0019861 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG2204 HOGENOM:HOG000058489 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00676 PROSITE:PS00688 GO:GO:0001539
GO:GO:0030092 RefSeq:YP_268242.1 ProteinModelPortal:Q485M3
STRING:Q485M3 GeneID:3520612 KEGG:cps:CPS_1500 PATRIC:21466207
KO:K10943 OMA:FRETRND ProtClustDB:CLSK874687
BioCyc:CPSY167879:GI48-1581-MONOMER Uniprot:Q485M3
Length = 446
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 23 IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKP 82
+D+V+++V M +SG+ LL+ I NH N+PV++M++ ++ + + GA ++ KP
Sbjct: 48 VDIVISDVQMGGMSGLSLLKSIKNHHA--NLPVLLMTAFGTIDDAVQAMKDGACNYIAKP 105
Query: 83 IRKNELQNL 91
L N+
Sbjct: 106 FAPQVLLNM 114
>TIGR_CMR|CPS_1500 [details] [associations]
symbol:CPS_1500 "flagellar regulatory protein C"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0030092 "regulation
of flagellum assembly" evidence=ISS] InterPro:IPR001789
InterPro:IPR002078 InterPro:IPR002197 InterPro:IPR003593
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158 Pfam:PF02954
PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382
SMART:SM00448 GO:GO:0005524 GO:GO:0019861 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
HOGENOM:HOG000058489 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00676 PROSITE:PS00688 GO:GO:0001539 GO:GO:0030092
RefSeq:YP_268242.1 ProteinModelPortal:Q485M3 STRING:Q485M3
GeneID:3520612 KEGG:cps:CPS_1500 PATRIC:21466207 KO:K10943
OMA:FRETRND ProtClustDB:CLSK874687
BioCyc:CPSY167879:GI48-1581-MONOMER Uniprot:Q485M3
Length = 446
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 23 IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKP 82
+D+V+++V M +SG+ LL+ I NH N+PV++M++ ++ + + GA ++ KP
Sbjct: 48 VDIVISDVQMGGMSGLSLLKSIKNHHA--NLPVLLMTAFGTIDDAVQAMKDGACNYIAKP 105
Query: 83 IRKNELQNL 91
L N+
Sbjct: 106 FAPQVLLNM 114
>UNIPROTKB|Q0BZW4 [details] [associations]
symbol:pleD "Response regulator PleD" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 GO:GO:0004871 SUPFAM:SSF55073 GO:GO:0016849
GO:GO:0009190 InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254
PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:CP000158 GenomeReviews:CP000158_GR KO:K02488
HOGENOM:HOG000167204 RefSeq:YP_760979.1 ProteinModelPortal:Q0BZW4
STRING:Q0BZW4 GeneID:4287816 KEGG:hne:HNE_2284 PATRIC:32217411
OMA:APRTINA BioCyc:HNEP228405:GI69-2306-MONOMER Uniprot:Q0BZW4
Length = 455
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ ENG QA ++ + + +++L +V+MP + G + +++ T IPV+M+++
Sbjct: 29 VLMAENGPQALEVAQ--RENPEIILLDVMMPGMDGYEVCQRLKADPTTSYIPVVMVTALS 86
Query: 63 SMSIVFKCLSKGAVYFLVKPI 83
M K L+ GA FL KP+
Sbjct: 87 EMEDRVKGLAAGAEDFLTKPV 107
>TIGR_CMR|DET_0316 [details] [associations]
symbol:DET_0316 "DNA-binding response regulator"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0005622 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 RefSeq:YP_181064.1
ProteinModelPortal:Q3Z9N5 STRING:Q3Z9N5 GeneID:3230308
KEGG:det:DET0316 PATRIC:21607703 OMA:RQMELIS ProtClustDB:CLSK741612
BioCyc:DETH243164:GJNF-316-MONOMER Uniprot:Q3Z9N5
Length = 225
Score = 103 (41.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/78 (32%), Positives = 49/78 (62%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMS-SHDSMSIVFKCLSKGAVYFLVKP 82
D ++ ++ +P +SGI +L++I ++ +PV++++ D M +V LSKGA F+ KP
Sbjct: 48 DFIILDLGLPDMSGIEVLQEI---RSFSKVPVLVLTVKKDEMDVVV-ALSKGADEFISKP 103
Query: 83 IRKNELQNLWQHVWRKCH 100
R+ EL + ++V ++ H
Sbjct: 104 FRQMELISRVKNVLKRSH 121
>UNIPROTKB|Q9WYT9 [details] [associations]
symbol:TM_0468 "Response regulator" species:243274
"Thermotoga maritima MSB8" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AE000512 GenomeReviews:AE000512_GR KO:K02485 EMBL:AGIJ01000001
PIR:D72374 RefSeq:NP_228278.1 PDB:3DGE PDB:3DGF PDB:3GL9
PDBsum:3DGE PDBsum:3DGF PDBsum:3GL9 IntAct:Q9WYT9 GeneID:897499
KEGG:tma:TM0468 PATRIC:23935833 OMA:WKRIPVI ProtClustDB:CLSK875163
EvolutionaryTrace:Q9WYT9 Uniprot:Q9WYT9
Length = 122
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI ENG A + L + DL++ +++MP + G +L+K+ + K IPVI++++
Sbjct: 29 VIEAENGQIALEKLSEFTP--DLIVLDIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHV 95
LS GA + KP ++ +H+
Sbjct: 87 GEEDESLALSLGARKVMRKPFSPSQFIEEVKHL 119
>TIGR_CMR|GSU_1129 [details] [associations]
symbol:GSU_1129 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_952182.1 ProteinModelPortal:Q74E35 GeneID:2687644
KEGG:gsu:GSU1129 PATRIC:22025020 OMA:YEFANII ProtClustDB:CLSK828199
BioCyc:GSUL243231:GH27-1139-MONOMER Uniprot:Q74E35
Length = 453
Score = 108 (43.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 2 AVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
AV + G +A++ L D D+V+T++ +P SGI +L+K+ VI+++ H
Sbjct: 30 AVKSAGAGSEAFQTLT--RDTFDIVITDLFLPDASGIDILKKVKEDAPLTE--VILITGH 85
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQ 89
S K + +GA ++ KP+ +EL+
Sbjct: 86 ASAETAVKAMKEGAFDYITKPLNFDELK 113
>TIGR_CMR|GSU_2915 [details] [associations]
symbol:GSU_2915 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 RefSeq:NP_953957.1
ProteinModelPortal:Q748T6 GeneID:2688534 KEGG:gsu:GSU2915
PATRIC:22028689 OMA:AFRYRMK ProtClustDB:CLSK829000
BioCyc:GSUL243231:GH27-2910-MONOMER Uniprot:Q748T6
Length = 457
Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V++ NG A +I+ + +Q DLVL ++ +P +SG+ L KI + + I VIM+++H
Sbjct: 30 VVSAGNGEDALRIVRE--EQPDLVLLDIQLPGISGLEALEKIKEYD--EEILVIMVTAHG 85
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
++ + GA ++ KP +E+
Sbjct: 86 ALETAVHAMRLGAYDYINKPFNLDEM 111
>UNIPROTKB|Q4K714 [details] [associations]
symbol:PFL_4888 "Sigma-54 dependent DNA-binding response
regulator" species:220664 "Pseudomonas protegens Pf-5" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0035556
"intracellular signal transduction" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
HOGENOM:HOG000058489 InterPro:IPR025662 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
KO:K02481 RefSeq:YP_261969.1 ProteinModelPortal:Q4K714
STRING:Q4K714 GeneID:3479299 KEGG:pfl:PFL_4888 PATRIC:19879244
OMA:CVERATI ProtClustDB:CLSK937927
BioCyc:PFLU220664:GIX8-4929-MONOMER Uniprot:Q4K714
Length = 465
Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V NGL A K+LE + IDLV+++ MP + G LL +I +PVI+M+++
Sbjct: 29 VFTAGNGLHALKVLEQ--EDIDLVISDWRMPGMDGPQLLGEIKQRYP--QLPVIVMTAYS 84
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
++ + + GA ++ KP +EL
Sbjct: 85 TVKNAVQSMRNGAYDYIAKPFDIDEL 110
>UNIPROTKB|Q9KSH9 [details] [associations]
symbol:VC_1277 "Transcriptional regulator, LuxR family"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000792 InterPro:IPR001789
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00196 PRINTS:PR00038
PROSITE:PS00622 PROSITE:PS50043 PROSITE:PS50110 SMART:SM00421
SMART:SM00448 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 SUPFAM:SSF46894 KO:K07684 HSSP:P10957 PIR:H82218
RefSeq:NP_230922.1 ProteinModelPortal:Q9KSH9 DNASU:2614731
GeneID:2614731 KEGG:vch:VC1277 PATRIC:20081634 OMA:VIRVVIA
ProtClustDB:CLSK874291 Uniprot:Q9KSH9
Length = 216
Score = 102 (41.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V NGL+A ++++ + Q D+VL +V MP ++GI R I + V+M++ HD
Sbjct: 37 VATASNGLEALELVK--LHQPDVVLMDVSMPIMNGIEATRLIKEE--VPHTKVLMLTMHD 92
Query: 63 SMSIVFKCLSKGAVYFLVKPI 83
+ + + + GA+ +++K I
Sbjct: 93 NREYIMQVMQAGAMGYMLKEI 113
>TIGR_CMR|VC_1277 [details] [associations]
symbol:VC_1277 "transcriptional regulator, LuxR family"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000792 InterPro:IPR001789
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00196 PRINTS:PR00038
PROSITE:PS00622 PROSITE:PS50043 PROSITE:PS50110 SMART:SM00421
SMART:SM00448 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 SUPFAM:SSF46894 KO:K07684 HSSP:P10957 PIR:H82218
RefSeq:NP_230922.1 ProteinModelPortal:Q9KSH9 DNASU:2614731
GeneID:2614731 KEGG:vch:VC1277 PATRIC:20081634 OMA:VIRVVIA
ProtClustDB:CLSK874291 Uniprot:Q9KSH9
Length = 216
Score = 102 (41.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V NGL+A ++++ + Q D+VL +V MP ++GI R I + V+M++ HD
Sbjct: 37 VATASNGLEALELVK--LHQPDVVLMDVSMPIMNGIEATRLIKEE--VPHTKVLMLTMHD 92
Query: 63 SMSIVFKCLSKGAVYFLVKPI 83
+ + + + GA+ +++K I
Sbjct: 93 NREYIMQVMQAGAMGYMLKEI 113
>UNIPROTKB|Q746Z1 [details] [associations]
symbol:GSU3376 "Response receiver-modulated diguanylate
cyclase" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_954416.1 HSSP:P06143
ProteinModelPortal:Q746Z1 GeneID:2686891 KEGG:gsu:GSU3376
PATRIC:22029607 HOGENOM:HOG000167205 OMA:LTHLHNR
ProtClustDB:CLSK829255 BioCyc:GSUL243231:GH27-3335-MONOMER
Uniprot:Q746Z1
Length = 308
Score = 105 (42.0 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 4 IAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
+ +GL+ +K L L +++DLVL ++ MP + G L + +++P+I+++S +
Sbjct: 32 LEARDGLEGFKTL--LNNKVDLVLCDLEMPRMDGFRFLSMTRSRGELQDLPIILLTSRED 89
Query: 64 MSIVFKCLSKGAVYFLVKPIRKNEL 88
+ L +GA ++ KP EL
Sbjct: 90 RDTKIRGLEQGASDYVTKPFDSGEL 114
>TIGR_CMR|GSU_3376 [details] [associations]
symbol:GSU_3376 "GGDEF/response regulator receiver domain
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_954416.1 HSSP:P06143
ProteinModelPortal:Q746Z1 GeneID:2686891 KEGG:gsu:GSU3376
PATRIC:22029607 HOGENOM:HOG000167205 OMA:LTHLHNR
ProtClustDB:CLSK829255 BioCyc:GSUL243231:GH27-3335-MONOMER
Uniprot:Q746Z1
Length = 308
Score = 105 (42.0 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 4 IAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
+ +GL+ +K L L +++DLVL ++ MP + G L + +++P+I+++S +
Sbjct: 32 LEARDGLEGFKTL--LNNKVDLVLCDLEMPRMDGFRFLSMTRSRGELQDLPIILLTSRED 89
Query: 64 MSIVFKCLSKGAVYFLVKPIRKNEL 88
+ L +GA ++ KP EL
Sbjct: 90 RDTKIRGLEQGASDYVTKPFDSGEL 114
>TIGR_CMR|CPS_4166 [details] [associations]
symbol:CPS_4166 "response regulator" species:167879
"Colwellia psychrerythraea 34H" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003594 Pfam:PF00072 Pfam:PF02518 PROSITE:PS50110
SMART:SM00387 SMART:SM00448 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
Gene3D:3.30.565.10 SUPFAM:SSF55874 RefSeq:YP_270818.1
ProteinModelPortal:Q47WK4 STRING:Q47WK4 GeneID:3522071
KEGG:cps:CPS_4166 PATRIC:21471193
BioCyc:CPSY167879:GI48-4176-MONOMER Uniprot:Q47WK4
Length = 508
Score = 108 (43.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 3 VIAVENGLQAWKI-LEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
V A N A KI L DL DL+L +++MP + G+ L +++ + +NI VI +++
Sbjct: 180 VKAALNAKTAMKICLSDLPP--DLILLDIMMPEVDGLTLCKQLKENPLTQNIVVIFLTAL 237
Query: 62 DSMSIVFKCLSKGAVYFLVKPI 83
V K LS GAV ++ KPI
Sbjct: 238 SETEDVVKGLSLGAVDYITKPI 259
>TIGR_CMR|GSU_0149 [details] [associations]
symbol:GSU_0149 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 HSSP:P06143 RefSeq:NP_951211.1
ProteinModelPortal:Q74GU5 GeneID:2687911 KEGG:gsu:GSU0149
PATRIC:22023046 HOGENOM:HOG000135524 OMA:ISHKFRT
ProtClustDB:CLSK827668 BioCyc:GSUL243231:GH27-183-MONOMER
Uniprot:Q74GU5
Length = 371
Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ +G +A ++ E ID++LT+V+MP L+GI LLR++ + + VI+M+ +
Sbjct: 38 VLQAGDGEEALRLFE--RGGIDVILTDVMMPKLNGIELLRRLKEMEP--TLVVIVMTGYA 93
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQ 89
I+ L A F+ KP+ +L+
Sbjct: 94 EKDIILNALKADADDFITKPLNLLQLK 120
>TIGR_CMR|CJE_1664 [details] [associations]
symbol:CJE_1664 "DNA-binding response regulator"
species:195099 "Campylobacter jejuni RM1221" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 RefSeq:YP_179645.1 ProteinModelPortal:Q5HSU0
STRING:Q5HSU0 GeneID:3232292 KEGG:cjr:CJE1664 PATRIC:20045123
OMA:KRNICEL ProtClustDB:CLSK879286
BioCyc:CJEJ195099:GJC0-1694-MONOMER Uniprot:Q5HSU0
Length = 226
Score = 102 (41.0 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/86 (25%), Positives = 47/86 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI +NG + K + DLV+T++ MP + G+ + R+I + ++P++++S++
Sbjct: 34 VIGAQNGDEGLKKFKKFKP--DLVITDIAMPIMDGLDMAREIK--EISDDVPIVVLSAYS 89
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
+ + + G +L+KP+ EL
Sbjct: 90 EKERLLRSIDIGIDKYLIKPVDIEEL 115
>UNIPROTKB|P0AFU4 [details] [associations]
symbol:glrR "GlrR DNA-binding transcriptional activator"
species:83333 "Escherichia coli K-12" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IEP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;IMP] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS;IDA] InterPro:IPR001789
InterPro:IPR002078 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0005737
GO:GO:0006355 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:U36841 GO:GO:0017111
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
HOGENOM:HOG000058489 InterPro:IPR025662 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
EMBL:M16778 EMBL:S67014 EMBL:Z21843 PIR:A65033 RefSeq:NP_417049.1
RefSeq:YP_490782.1 ProteinModelPortal:P0AFU4 SMR:P0AFU4
IntAct:P0AFU4 MINT:MINT-1317436 PRIDE:P0AFU4
EnsemblBacteria:EBESCT00000000551 EnsemblBacteria:EBESCT00000014286
GeneID:12930208 GeneID:947042 KEGG:ecj:Y75_p2507 KEGG:eco:b2554
PATRIC:32120507 EchoBASE:EB1262 EcoGene:EG11285 KO:K07715
OMA:FAEIQKH ProtClustDB:PRK15115 BioCyc:EcoCyc:EG11285-MONOMER
BioCyc:ECOL316407:JW2538-MONOMER Genevestigator:P0AFU4
Uniprot:P0AFU4
Length = 444
Score = 107 (42.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/87 (27%), Positives = 49/87 (56%)
Query: 2 AVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
+V+ E+G + ++L +++DLV++++ M + G+ L +I K +PVI++++H
Sbjct: 31 SVVTAESGAEGLRVLN--REKVDLVISDLRMDEMDGMQLFAEIQ--KVQPGMPVIILTAH 86
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNEL 88
S+ +G FL KP+ K+ L
Sbjct: 87 GSIPDAVAATQQGVFSFLTKPVDKDAL 113
>UNIPROTKB|Q48GG3 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_275520.1
ProteinModelPortal:Q48GG3 SMR:Q48GG3 STRING:Q48GG3 GeneID:3558182
KEGG:psp:PSPPH_3362 PATRIC:19976130 OMA:GHYDFLV
ProtClustDB:CLSK642753 Uniprot:Q48GG3
Length = 124
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/92 (23%), Positives = 49/92 (53%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
++GL A +L+ D ++T+ MP ++GI LLR++ + K++PV+M+++
Sbjct: 32 DDGLTALPMLQS--GAFDFLVTDWNMPGMTGIDLLRQVRADERLKSLPVLMVTAEAKREQ 89
Query: 67 VFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+ + G ++VKP L+ + ++ +
Sbjct: 90 IIEAAQAGVNGYVVKPFTAQALKEKIEKIFER 121
>UNIPROTKB|Q9A5I5 [details] [associations]
symbol:pleD "Response regulator PleD" species:190650
"Caulobacter crescentus CB15" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0005525
GO:GO:0005737 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0007049 SUPFAM:SSF55073 UniPathway:UPA00599 GO:GO:0052621
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 EMBL:AE005673
GenomeReviews:AE005673_GR KO:K02488 EMBL:L42554 PIR:E87554
RefSeq:NP_421265.1 ProteinModelPortal:Q9A5I5 SMR:Q9A5I5
DIP:DIP-29503N IntAct:Q9A5I5 GeneID:943650 KEGG:ccr:CC_2462
PATRIC:21301956 HOGENOM:HOG000167204 OMA:LAICERN
ProtClustDB:PRK09581 Uniprot:Q9A5I5
Length = 454
Score = 107 (42.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 21 DQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLV 80
D D++L +V+MP + G + RK+ + T ++IPV+++++ D + L GA FL
Sbjct: 45 DLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLT 104
Query: 81 KPI 83
KPI
Sbjct: 105 KPI 107
>TIGR_CMR|DET_0170 [details] [associations]
symbol:DET_0170 "DNA-binding response regulator"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034819
RefSeq:YP_180918.1 ProteinModelPortal:Q3ZA31 STRING:Q3ZA31
GeneID:3230558 KEGG:det:DET0170 PATRIC:21607423 OMA:RIRVNIR
ProtClustDB:CLSK741609 BioCyc:DETH243164:GJNF-170-MONOMER
Uniprot:Q3ZA31
Length = 232
Score = 102 (41.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPI 83
D ++ ++ +P +SG +LR+I + +PVI+++ + S + K LS GA +LVKP
Sbjct: 48 DAIILDIGLPDISGYEVLRQI---RLFSELPVIILTIRNEESDIVKALSLGADDYLVKPF 104
Query: 84 RKNELQNLWQHVWRKCH 100
R+ EL + + R+ H
Sbjct: 105 RQMELLARIKAISRRLH 121
>UNIPROTKB|Q4KG39 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:220664
"Pseudomonas protegens Pf-5" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0005622 GO:GO:0006935
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 OMA:FGFVISD RefSeq:YP_258794.1
ProteinModelPortal:Q4KG39 SMR:Q4KG39 STRING:Q4KG39 GeneID:3477601
KEGG:pfl:PFL_1668 PATRIC:19872565 ProtClustDB:CLSK715044
BioCyc:PFLU220664:GIX8-1676-MONOMER Uniprot:Q4KG39
Length = 123
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 22/95 (23%), Positives = 48/95 (50%)
Query: 4 IAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
+ ++G A +L ID ++T+ MP ++GI LLR + + K++PV+M+++
Sbjct: 29 VEADDGTTAIPVLNS--GSIDFLVTDWNMPGMTGIDLLRHVRADEKLKHLPVLMVTAEAK 86
Query: 64 MSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+ + G ++VKP L+ + ++ +
Sbjct: 87 REQIIEAAQAGVNGYVVKPFTAQALKEKIEKIFER 121
>UNIPROTKB|Q7D1A8 [details] [associations]
symbol:cheY "Chemotaxis receiver protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0006928 "cellular component
movement" evidence=IGC] [GO:0052143 "chemotaxis on or near host
involved in symbiotic interaction" evidence=IGC] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0006928 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 EMBL:AE007869 GenomeReviews:AE007869_GR
GO:GO:0052143 KO:K03413 ProtClustDB:CLSK881447 HSSP:P06143
RefSeq:NP_353545.1 ProteinModelPortal:Q7D1A8 STRING:Q7D1A8
GeneID:1132554 KEGG:atu:Atu0516 PATRIC:20810735 OMA:KNDRYRA
Uniprot:Q7D1A8
Length = 121
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 19/79 (24%), Positives = 43/79 (54%)
Query: 4 IAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
I E+G++ ++LE D+++T++ MP L G G + + ++ + IP++++++
Sbjct: 30 IQAEDGIEGLEVLEQ--SNPDVIVTDINMPRLDGFGFIEGVRRNEKYRAIPILVLTTESD 87
Query: 64 MSIVFKCLSKGAVYFLVKP 82
+ GA ++VKP
Sbjct: 88 AEKKNRARQAGATGWIVKP 106
>NCBI_NP|NP_353545.1 [details] [associations]
symbol:cheY "chemotaxisreceiverprotein" species:176299
"Agrobacterium fabrum str. C58" [GO:0052143 "chemotaxis on or near
host involved in symbiotic interaction" evidence=IGC] [GO:0006928
"cellular component movement" evidence=IGC] REFSEQ:NC_003062
Ncbi:NP_353545
Length = 121
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 19/79 (24%), Positives = 43/79 (54%)
Query: 4 IAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDS 63
I E+G++ ++LE D+++T++ MP L G G + + ++ + IP++++++
Sbjct: 30 IQAEDGIEGLEVLEQ--SNPDVIVTDINMPRLDGFGFIEGVRRNEKYRAIPILVLTTESD 87
Query: 64 MSIVFKCLSKGAVYFLVKP 82
+ GA ++VKP
Sbjct: 88 AEKKNRARQAGATGWIVKP 106
>UNIPROTKB|Q8EEQ6 [details] [associations]
symbol:cheY "Chemotaxis signal transduction system response
regulator CheY" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 OMA:KLANYKF
HSSP:P06143 RefSeq:NP_717910.1 ProteinModelPortal:Q8EEQ6
GeneID:1170042 KEGG:son:SO_2318 PATRIC:23524259 Uniprot:Q8EEQ6
Length = 121
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 21 DQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLV 80
D+I+L++++V MP + GI L+++ H K PVIM+++ + + GA ++V
Sbjct: 44 DKINLIISDVNMPNMDGISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVV 103
Query: 81 KPIRKNEL 88
KP + ++
Sbjct: 104 KPFQPPQM 111
>TIGR_CMR|CPS_4295 [details] [associations]
symbol:CPS_4295 "putative chemotaxis response regulator
CheY" species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 RefSeq:YP_270945.1 ProteinModelPortal:Q47W77
STRING:Q47W77 GeneID:3521289 KEGG:cps:CPS_4295 PATRIC:21471447
OMA:QHEDLNT BioCyc:CPSY167879:GI48-4305-MONOMER Uniprot:Q47W77
Length = 117
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
NG +A IL D + I+++ ++ MP + GIG+L+ I K N V ++S+ +
Sbjct: 31 NGAEALTILRD--NSIEILFLDLTMPGIDGIGVLQGIK--KLNLNCSVFVISADIQPEMQ 86
Query: 68 FKCLSKGAVYFLVKPIRKNEL-QNLWQH 94
K + GA F+ KP++ + L NL QH
Sbjct: 87 NKVKALGAKEFMRKPVKADLLLNNLRQH 114
>TIGR_CMR|SO_2318 [details] [associations]
symbol:SO_2318 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
OMA:KLANYKF HSSP:P06143 RefSeq:NP_717910.1
ProteinModelPortal:Q8EEQ6 GeneID:1170042 KEGG:son:SO_2318
PATRIC:23524259 Uniprot:Q8EEQ6
Length = 121
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 21 DQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLV 80
D+I+L++++V MP + GI L+++ H K PVIM+++ + + GA ++V
Sbjct: 44 DKINLIISDVNMPNMDGISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVV 103
Query: 81 KPIRKNEL 88
KP + ++
Sbjct: 104 KPFQPPQM 111
>TIGR_CMR|ECH_0773 [details] [associations]
symbol:ECH_0773 "putative response regulator/diguanylate
cyclase" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0005622 SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 KO:K02488 HOGENOM:HOG000167204
ProtClustDB:PRK09581 RefSeq:YP_507571.1 ProteinModelPortal:Q2GG62
STRING:Q2GG62 GeneID:3927207 KEGG:ech:ECH_0773 PATRIC:20576976
OMA:PDICARY BioCyc:ECHA205920:GJNR-776-MONOMER Uniprot:Q2GG62
Length = 458
Score = 105 (42.0 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ NG+ A KI E+ D++L +V+MP + G +++ ++ IP++M+++ D
Sbjct: 29 VLTATNGMDAIKIAEE--KHPDIILLDVMMPEMDGYETCKRLKSNPETTYIPIVMVTALD 86
Query: 63 SMSIV-FKCLSKGAVYFLVKPIRKNEL 88
+ S LS GA FL KPI L
Sbjct: 87 NTSDNRVSGLSYGADDFLTKPINDTAL 113
>UNIPROTKB|Q06065 [details] [associations]
symbol:atoC "AtoC transcriptional activator; Az protein
inhibitor of ODC" species:83333 "Escherichia coli K-12" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0005737 GO:GO:0045893 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG2204 EMBL:U17902 EMBL:L13078 PIR:B64992
RefSeq:NP_416724.1 RefSeq:YP_490461.1 ProteinModelPortal:Q06065
SMR:Q06065 DIP:DIP-9190N IntAct:Q06065 PRIDE:Q06065
EnsemblBacteria:EBESCT00000003393 EnsemblBacteria:EBESCT00000015461
GeneID:12932980 GeneID:947444 KEGG:ecj:Y75_p2183 KEGG:eco:b2220
PATRIC:32119799 EchoBASE:EB1619 EcoGene:EG11668
HOGENOM:HOG000058489 KO:K07714 OMA:EERRIIM ProtClustDB:PRK11361
BioCyc:EcoCyc:ATOC-MONOMER BioCyc:ECOL316407:JW2214-MONOMER
Genevestigator:Q06065 InterPro:IPR025662 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
Uniprot:Q06065
Length = 461
Score = 105 (42.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
NG A + D+ D+VL ++ MP + GI L+++ +H+T PVI+M+++ +
Sbjct: 36 NGRTALHLFADIHP--DVVLMDIRMPEMDGIKALKEMRSHET--RTPVILMTAYAEVETA 91
Query: 68 FKCLSKGAVYFLVKPIRKNELQNL 91
+ L GA +++KP +EL NL
Sbjct: 92 VEALRCGAFDYVIKPFDLDEL-NL 114
>TIGR_CMR|BA_2212 [details] [associations]
symbol:BA_2212 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034815 HSSP:Q9WYN0
RefSeq:NP_844604.1 RefSeq:YP_018854.1 RefSeq:YP_028319.1
ProteinModelPortal:Q81R46 DNASU:1085543
EnsemblBacteria:EBBACT00000012844 EnsemblBacteria:EBBACT00000018535
EnsemblBacteria:EBBACT00000022147 GeneID:1085543 GeneID:2815122
GeneID:2848498 KEGG:ban:BA_2212 KEGG:bar:GBAA_2212 KEGG:bat:BAS2056
OMA:IRATESK ProtClustDB:CLSK918052
BioCyc:BANT260799:GJAJ-2124-MONOMER
BioCyc:BANT261594:GJ7F-2201-MONOMER Uniprot:Q81R46
Length = 227
Score = 99 (39.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPI 83
DL+L +V++P +SG+ +LR+I IP+I++++ DS+ L +GA ++ KP
Sbjct: 48 DLILLDVMLPNISGLEVLRRIRLKNAV--IPIILLTARDSVVDKVSGLDQGASDYITKPF 105
Query: 84 RKNEL 88
+ EL
Sbjct: 106 QIEEL 110
>TIGR_CMR|GSU_2581 [details] [associations]
symbol:GSU_2581 "sigma-54 dependent transcriptional
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025944 PROSITE:PS00688 HSSP:P06143 RefSeq:NP_953627.1
ProteinModelPortal:Q74A10 GeneID:2687775 KEGG:gsu:GSU2581
PATRIC:22028017 OMA:LTERIMA ProtClustDB:CLSK763211
BioCyc:GSUL243231:GH27-2558-MONOMER Uniprot:Q74A10
Length = 456
Score = 104 (41.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 23/88 (26%), Positives = 51/88 (57%)
Query: 2 AVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
A + +G QA +LE + +DL++++++M ++G+ LL ++ + N+PVI++++
Sbjct: 29 APLTAVSGAQALALLE--REHVDLLISDLIMEGMNGLELLDRV--RERYPNVPVIVVTAR 84
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQ 89
S+ + + +GA +L KP L+
Sbjct: 85 GSVESAVEAMRRGAYDYLAKPFNPEVLR 112
>TIGR_CMR|CPS_1260 [details] [associations]
symbol:CPS_1260 "putative nitrate/nitrite DNA-binding
response regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000792 InterPro:IPR001789 InterPro:IPR016032
Pfam:PF00072 Pfam:PF00196 PRINTS:PR00038 PROSITE:PS00622
PROSITE:PS50043 PROSITE:PS50110 SMART:SM00421 SMART:SM00448
GO:GO:0035556 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 SUPFAM:SSF46894 eggNOG:COG2197 HOGENOM:HOG000034813
KO:K07684 RefSeq:YP_268003.1 ProteinModelPortal:Q486L2
STRING:Q486L2 GeneID:3521261 KEGG:cps:CPS_1260 PATRIC:21465757
OMA:THKRNIK ProtClustDB:CLSK938262
BioCyc:CPSY167879:GI48-1341-MONOMER Uniprot:Q486L2
Length = 206
Score = 98 (39.6 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKT-CKNIPVIMMSSHDSMS 65
ENG QA ++++ L D+VL ++ MP + G+ +L I CK V+M+S HD+
Sbjct: 34 ENGKQALELIKSL--DFDIVLMDINMPEMDGMYVLELIKEQDLDCK---VLMLSMHDNKE 88
Query: 66 IVFKCLSKGAVYFLVKPIRKNEL 88
+ + GA +++K + EL
Sbjct: 89 YILGAMRHGADGYILKDVPGAEL 111
>TIGR_CMR|GSU_1658 [details] [associations]
symbol:GSU_1658 "response regulator/GGDEF domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 KO:K02488 HSSP:P06143 RefSeq:NP_952709.1
ProteinModelPortal:Q74CL4 GeneID:2685291 KEGG:gsu:GSU1658
PATRIC:22026165 HOGENOM:HOG000131459 OMA:NINFLEE
ProtClustDB:CLSK924527 BioCyc:GSUL243231:GH27-1650-MONOMER
Uniprot:Q74CL4
Length = 458
Score = 104 (41.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V V +G + K LE + LV+T+++MP +SGI +L ++ + N+ VI+++ H
Sbjct: 28 VDTVASGTEGLKRLEK--QEYHLVITDLVMPGMSGIEVLSRVK--QKAPNVDVILVTGHA 83
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQN 90
++ L GA +++KP +E ++
Sbjct: 84 NLESAVYALKNGARDYILKPFNHDEFKH 111
>UNIPROTKB|Q9KQ67 [details] [associations]
symbol:VC_2135 "Sigma-54 dependent response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0030092 "regulation of flagellum assembly" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382
SMART:SM00448 GO:GO:0005524 GO:GO:0035556 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0017111
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00676 PROSITE:PS00688 GO:GO:0001539
GO:GO:0030092 KO:K10943 ProtClustDB:CLSK874687 HSSP:P41789
OMA:NWPNLPV PIR:G82114 RefSeq:NP_231766.1 ProteinModelPortal:Q9KQ67
DNASU:2613391 GeneID:2613391 KEGG:vch:VC2135 PATRIC:20083297
Uniprot:Q9KQ67
Length = 479
Score = 104 (41.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 23 IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKP 82
+D+V+++V M + G+ LLR I H N+PV++M+++ ++ + GA+ ++ KP
Sbjct: 50 VDIVVSDVQMAGMGGLALLRSIKQH--WPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKP 107
Query: 83 IRKNELQNL 91
L N+
Sbjct: 108 FAPEVLLNM 116
>TIGR_CMR|VC_2135 [details] [associations]
symbol:VC_2135 "flagellar regulatory protein C" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0001539 "ciliary or
flagellar motility" evidence=ISS] [GO:0030092 "regulation of
flagellum assembly" evidence=ISS] InterPro:IPR001789
InterPro:IPR002078 InterPro:IPR002197 InterPro:IPR003593
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158 Pfam:PF02954
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00676 PROSITE:PS00688 GO:GO:0001539
GO:GO:0030092 KO:K10943 ProtClustDB:CLSK874687 HSSP:P41789
OMA:NWPNLPV PIR:G82114 RefSeq:NP_231766.1 ProteinModelPortal:Q9KQ67
DNASU:2613391 GeneID:2613391 KEGG:vch:VC2135 PATRIC:20083297
Uniprot:Q9KQ67
Length = 479
Score = 104 (41.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 23 IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKP 82
+D+V+++V M + G+ LLR I H N+PV++M+++ ++ + GA+ ++ KP
Sbjct: 50 VDIVVSDVQMAGMGGLALLRSIKQH--WPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKP 107
Query: 83 IRKNELQNL 91
L N+
Sbjct: 108 FAPEVLLNM 116
>TIGR_CMR|BA_3153 [details] [associations]
symbol:BA_3153 "response regulator" species:198094
"Bacillus anthracis str. Ames" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P52934
RefSeq:NP_845471.1 RefSeq:YP_022633.1 RefSeq:YP_029187.1
ProteinModelPortal:Q81NN1 DNASU:1086758
EnsemblBacteria:EBBACT00000008356 EnsemblBacteria:EBBACT00000018539
EnsemblBacteria:EBBACT00000020271 GeneID:1086758 GeneID:2820732
GeneID:2852622 KEGG:ban:BA_3153 KEGG:bar:GBAA_3153 KEGG:bat:BAS2929
HOGENOM:HOG000087762 OMA:KEIFMNL ProtClustDB:CLSK2485170
BioCyc:BANT260799:GJAJ-2992-MONOMER
BioCyc:BANT261594:GJ7F-3097-MONOMER InterPro:IPR013972 Pfam:PF08664
Uniprot:Q81NN1
Length = 314
Score = 101 (40.6 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
ENGL + + ++ ID++ ++LMP GI +R+I K +IM+S +S +
Sbjct: 33 ENGLSLEQQML-ILKNIDILFIDLLMPIQDGIKTIRQI---KPSFKGKIIMVSQVESKEL 88
Query: 67 VFKCLSKGAVYFLVKPIRKNEL 88
+ + S G Y+++KPI + E+
Sbjct: 89 IAEAYSLGVEYYIIKPINRIEV 110
>TIGR_CMR|GSU_1038 [details] [associations]
symbol:GSU_1038 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR013656 Pfam:PF08448
RefSeq:NP_952091.1 ProteinModelPortal:Q74EC5 GeneID:2688721
KEGG:gsu:GSU1038 PATRIC:22024844 OMA:ECALENA
BioCyc:GSUL243231:GH27-1025-MONOMER Uniprot:Q74EC5
Length = 513
Score = 104 (41.7 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V E+G +A ++ +L DLVL +++MP + G G I +++P+I+M++ D
Sbjct: 47 VADAEDGARAVEMFRELSP--DLVLLDIMMPVMDGYGACAAIRGLPGGEHVPIIIMTALD 104
Query: 63 SMSIVFKCLSKGAVYFLVKPI 83
+ + + GA F+ KP+
Sbjct: 105 DANSIGRAFDAGATDFIEKPV 125
>UNIPROTKB|Q9KQD5 [details] [associations]
symbol:VC_2065 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413
OMA:GHYDFLV HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1
ProteinModelPortal:Q9KQD5 SMR:Q9KQD5 DNASU:2613445 GeneID:2613445
KEGG:vch:VC2065 PATRIC:20083164 ProtClustDB:CLSK874661
Uniprot:Q9KQD5
Length = 130
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
++GL A +L+ D V+T+ MP + GI LL+ I + K++PV+M+++
Sbjct: 40 DDGLTALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQ 97
Query: 67 VFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+ + G ++VKP L+ ++ +
Sbjct: 98 IIEAAQAGVNGYIVKPFTAATLKEKLDKIFER 129
>TIGR_CMR|VC_2065 [details] [associations]
symbol:VC_2065 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413 OMA:GHYDFLV
HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1 ProteinModelPortal:Q9KQD5
SMR:Q9KQD5 DNASU:2613445 GeneID:2613445 KEGG:vch:VC2065
PATRIC:20083164 ProtClustDB:CLSK874661 Uniprot:Q9KQD5
Length = 130
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
++GL A +L+ D V+T+ MP + GI LL+ I + K++PV+M+++
Sbjct: 40 DDGLTALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQ 97
Query: 67 VFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
+ + G ++VKP L+ ++ +
Sbjct: 98 IIEAAQAGVNGYIVKPFTAATLKEKLDKIFER 129
>TIGR_CMR|GSU_1671 [details] [associations]
symbol:GSU_1671 "response regulator/GGDEF domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P06143 HOGENOM:HOG000167205 RefSeq:NP_952722.1
ProteinModelPortal:Q74CK2 GeneID:2687445 KEGG:gsu:GSU1671
PATRIC:22026193 OMA:IADWLMP ProtClustDB:CLSK740862
BioCyc:GSUL243231:GH27-1671-MONOMER Uniprot:Q74CK2
Length = 322
Score = 101 (40.6 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ ENG +A +I +V+T+ +MP + G+ L R I + + +I+++S D
Sbjct: 42 VVMAENGKEALEIFNK--GYYPIVMTDWVMPEMDGLELCRAIRADCSGRYTYIILLTSQD 99
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
S + V L GA +LVKP + EL
Sbjct: 100 SKNDVIAGLEAGADEYLVKPAHQVEL 125
>UNIPROTKB|Q3AAN7 [details] [associations]
symbol:spo0A "Stage 0 sporulation protein A" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0030436 "asexual
sporulation" evidence=ISS] InterPro:IPR001789 InterPro:IPR012052
InterPro:IPR014879 InterPro:IPR016032 Pfam:PF00072 Pfam:PF08769
PIRSF:PIRSF002937 ProDom:PD010908 PROSITE:PS50110 SMART:SM00448
GO:GO:0005737 GO:GO:0035556 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0005509 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 SUPFAM:SSF46894
GO:GO:0030436 GO:GO:0042173 GO:GO:0050906 HOGENOM:HOG000057639
KO:K07699 OMA:RGKPTNS TIGRFAMs:TIGR02875 RefSeq:YP_360797.1
ProteinModelPortal:Q3AAN7 SMR:Q3AAN7 STRING:Q3AAN7 GeneID:3726731
KEGG:chy:CHY_1978 PATRIC:21277043
BioCyc:CHYD246194:GJCN-1977-MONOMER Uniprot:Q3AAN7
Length = 263
Score = 99 (39.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 1 MAVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSS 60
+A IA NG+ +++ + D+V+ +++MP L GIG+L K+ + VI++++
Sbjct: 31 LAGIA-HNGVDGLEVIAQ--QKPDIVVLDIIMPHLDGIGVLEKLTEFEDRPK--VILLTA 85
Query: 61 HDSMSIVFKCLSKGAVYFLVKP 82
SI K + GA Y+++KP
Sbjct: 86 FGQESITQKAVELGADYYILKP 107
>TIGR_CMR|CHY_1978 [details] [associations]
symbol:CHY_1978 "stage 0 sporulation protein A"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0030436 "asexual sporulation" evidence=ISS]
InterPro:IPR001789 InterPro:IPR012052 InterPro:IPR014879
InterPro:IPR016032 Pfam:PF00072 Pfam:PF08769 PIRSF:PIRSF002937
ProDom:PD010908 PROSITE:PS50110 SMART:SM00448 GO:GO:0005737
GO:GO:0035556 GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0005509 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 SUPFAM:SSF46894 GO:GO:0030436 GO:GO:0042173
GO:GO:0050906 HOGENOM:HOG000057639 KO:K07699 OMA:RGKPTNS
TIGRFAMs:TIGR02875 RefSeq:YP_360797.1 ProteinModelPortal:Q3AAN7
SMR:Q3AAN7 STRING:Q3AAN7 GeneID:3726731 KEGG:chy:CHY_1978
PATRIC:21277043 BioCyc:CHYD246194:GJCN-1977-MONOMER Uniprot:Q3AAN7
Length = 263
Score = 99 (39.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 1 MAVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSS 60
+A IA NG+ +++ + D+V+ +++MP L GIG+L K+ + VI++++
Sbjct: 31 LAGIA-HNGVDGLEVIAQ--QKPDIVVLDIIMPHLDGIGVLEKLTEFEDRPK--VILLTA 85
Query: 61 HDSMSIVFKCLSKGAVYFLVKP 82
SI K + GA Y+++KP
Sbjct: 86 FGQESITQKAVELGADYYILKP 107
>TIGR_CMR|GSU_2212 [details] [associations]
symbol:GSU_2212 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_953261.1 ProteinModelPortal:Q74AY7 GeneID:2687085
KEGG:gsu:GSU2212 PATRIC:22027279 OMA:SSAMRRQ ProtClustDB:CLSK924580
BioCyc:GSUL243231:GH27-2150-MONOMER Uniprot:Q74AY7
Length = 128
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 19/84 (22%), Positives = 48/84 (57%)
Query: 1 MAVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSS 60
++++ +G+ K L IDL+LT++ MP + G+ L+ + + + +++P+ ++++
Sbjct: 29 ISIVEASDGVDGLKKLS--AHAIDLILTDINMPVMDGLKLVSLVRSDPSHRHLPIAIITT 86
Query: 61 HDSMSIVFKCLSKGAVYFLVKPIR 84
+ + L+ GA ++ KPI+
Sbjct: 87 EGAAEDRERALALGANAYITKPIQ 110
>UNIPROTKB|Q0PBM2 [details] [associations]
symbol:cheA "Chemotaxis histidine kinase" species:192222
"Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560 SUPFAM:SSF50341
EMBL:AL111168 GenomeReviews:AL111168_GR OMA:CDHGIED
ProtClustDB:CLSK872488 PIR:B81447 RefSeq:YP_002343725.1
ProteinModelPortal:Q0PBM2 IntAct:Q0PBM2 GeneID:904608
KEGG:cje:Cj0284c PATRIC:20057487 HOGENOM:HOG000255264
BioCyc:CJEJ192222:GJTS-263-MONOMER Uniprot:Q0PBM2
Length = 769
Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
Identities = 23/91 (25%), Positives = 48/91 (52%)
Query: 1 MAVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSS 60
+++I NG++A I++ ID +L ++ MP + G L +I + +N+P+I ++S
Sbjct: 671 VSLIEATNGVEALNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTS 730
Query: 61 HDSMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
S + + + G ++ KP L+N+
Sbjct: 731 RTSKTDRLRGVEVGMTEYITKPYSPEYLENV 761
>UNIPROTKB|Q5HWI3 [details] [associations]
symbol:cheA "Chemotaxis protein CheA" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0016301 GO:GO:0004871
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560
SUPFAM:SSF50341 OMA:CDHGIED ProtClustDB:CLSK872488
HOGENOM:HOG000255264 RefSeq:YP_178352.1 ProteinModelPortal:Q5HWI3
STRING:Q5HWI3 GeneID:3231094 KEGG:cjr:CJE0332 PATRIC:20042366
BioCyc:CJEJ195099:GJC0-337-MONOMER Uniprot:Q5HWI3
Length = 769
Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
Identities = 23/91 (25%), Positives = 48/91 (52%)
Query: 1 MAVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSS 60
+++I NG++A I++ ID +L ++ MP + G L +I + +N+P+I ++S
Sbjct: 671 VSLIEATNGVEALNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTS 730
Query: 61 HDSMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
S + + + G ++ KP L+N+
Sbjct: 731 RTSKTDRLRGVEVGMTEYITKPYSPEYLENV 761
>TIGR_CMR|CJE_0332 [details] [associations]
symbol:CJE_0332 "chemotaxis protein CheA" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0016301 GO:GO:0004871
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560
SUPFAM:SSF50341 OMA:CDHGIED ProtClustDB:CLSK872488
HOGENOM:HOG000255264 RefSeq:YP_178352.1 ProteinModelPortal:Q5HWI3
STRING:Q5HWI3 GeneID:3231094 KEGG:cjr:CJE0332 PATRIC:20042366
BioCyc:CJEJ195099:GJC0-337-MONOMER Uniprot:Q5HWI3
Length = 769
Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
Identities = 23/91 (25%), Positives = 48/91 (52%)
Query: 1 MAVIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSS 60
+++I NG++A I++ ID +L ++ MP + G L +I + +N+P+I ++S
Sbjct: 671 VSLIEATNGVEALNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTS 730
Query: 61 HDSMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
S + + + G ++ KP L+N+
Sbjct: 731 RTSKTDRLRGVEVGMTEYITKPYSPEYLENV 761
>UNIPROTKB|Q8ECD7 [details] [associations]
symbol:cheB1 "Chemotaxis response regulator
protein-glutamate methylesterase of group 1 operon" species:211586
"Shewanella oneidensis MR-1" [GO:0006935 "chemotaxis" evidence=ISS]
[GO:0008984 "protein-glutamate methylesterase activity"
evidence=ISS] HAMAP:MF_00099 InterPro:IPR000673 InterPro:IPR001789
InterPro:IPR008248 Pfam:PF00072 Pfam:PF01339 PIRSF:PIRSF000876
PROSITE:PS50110 PROSITE:PS50122 SMART:SM00448 GO:GO:0005737
GO:GO:0006355 GO:GO:0035556 GO:GO:0006935 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG2201 HOGENOM:HOG000151424 KO:K03412
ProtClustDB:PRK00742 GO:GO:0008984 Gene3D:3.40.50.180
SUPFAM:SSF52738 RefSeq:NP_718761.1 ProteinModelPortal:Q8ECD7
GeneID:1170899 KEGG:son:SO_3206 PATRIC:23526096 OMA:IATNKDD
Uniprot:Q8ECD7
Length = 374
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 1 MAVIAV-ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMS 59
+ VIA NG +A K+ DL Q+ + ++ MP + GI +R+IM C P++M S
Sbjct: 28 LEVIATASNGAEAVKMTADLNPQV--ITMDIEMPVMDGITAVREIM--AKCPT-PILMFS 82
Query: 60 S--HDSMSIVFKCLSKGAVYFLVK 81
S HD L GA+ FL K
Sbjct: 83 SLTHDGAKATLDALDAGALDFLPK 106
>TIGR_CMR|SO_3206 [details] [associations]
symbol:SO_3206 "protein-glutamate methylesterase CheB"
species:211586 "Shewanella oneidensis MR-1" [GO:0006935
"chemotaxis" evidence=ISS] [GO:0008984 "protein-glutamate
methylesterase activity" evidence=ISS] HAMAP:MF_00099
InterPro:IPR000673 InterPro:IPR001789 InterPro:IPR008248
Pfam:PF00072 Pfam:PF01339 PIRSF:PIRSF000876 PROSITE:PS50110
PROSITE:PS50122 SMART:SM00448 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2201
HOGENOM:HOG000151424 KO:K03412 ProtClustDB:PRK00742 GO:GO:0008984
Gene3D:3.40.50.180 SUPFAM:SSF52738 RefSeq:NP_718761.1
ProteinModelPortal:Q8ECD7 GeneID:1170899 KEGG:son:SO_3206
PATRIC:23526096 OMA:IATNKDD Uniprot:Q8ECD7
Length = 374
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 1 MAVIAV-ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMS 59
+ VIA NG +A K+ DL Q+ + ++ MP + GI +R+IM C P++M S
Sbjct: 28 LEVIATASNGAEAVKMTADLNPQV--ITMDIEMPVMDGITAVREIM--AKCPT-PILMFS 82
Query: 60 S--HDSMSIVFKCLSKGAVYFLVK 81
S HD L GA+ FL K
Sbjct: 83 SLTHDGAKATLDALDAGALDFLPK 106
>UNIPROTKB|Q9KNI9 [details] [associations]
symbol:VC_2749 "Nitrogen regulation protein NR(I)"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0006808 "regulation of nitrogen utilization"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
InterPro:IPR010114 Pfam:PF00072 Pfam:PF00158 Pfam:PF02954
PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382
SMART:SM00448 GO:GO:0005524 GO:GO:0009399 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0017111
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0006808
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 KO:K07712
OMA:ARGQSNL GO:GO:0050906 TIGRFAMs:TIGR01818 HSSP:P41789 PIR:D82038
RefSeq:NP_232375.1 ProteinModelPortal:Q9KNI9 SMR:Q9KNI9
DNASU:2614912 GeneID:2614912 KEGG:vch:VC2749 PATRIC:20084518
ProtClustDB:CLSK874911 Uniprot:Q9KNI9
Length = 468
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPI 83
D++++++ MP + GI LL ++ H+ +PVI+M++H + +GA +L KP
Sbjct: 51 DVLVSDIRMPGMDGIALLNQV--HQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPF 108
Query: 84 RKNELQNL 91
+E L
Sbjct: 109 DVDETLTL 116
>TIGR_CMR|VC_2749 [details] [associations]
symbol:VC_2749 "nitrogen regulation protein NR(I)"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006808 "regulation of nitrogen utilization" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 InterPro:IPR010114
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0009399 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0006808 InterPro:IPR025662
InterPro:IPR025943 InterPro:IPR025944 PROSITE:PS00675
PROSITE:PS00676 PROSITE:PS00688 KO:K07712 OMA:ARGQSNL GO:GO:0050906
TIGRFAMs:TIGR01818 HSSP:P41789 PIR:D82038 RefSeq:NP_232375.1
ProteinModelPortal:Q9KNI9 SMR:Q9KNI9 DNASU:2614912 GeneID:2614912
KEGG:vch:VC2749 PATRIC:20084518 ProtClustDB:CLSK874911
Uniprot:Q9KNI9
Length = 468
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPI 83
D++++++ MP + GI LL ++ H+ +PVI+M++H + +GA +L KP
Sbjct: 51 DVLVSDIRMPGMDGIALLNQV--HQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPF 108
Query: 84 RKNELQNL 91
+E L
Sbjct: 109 DVDETLTL 116
>UNIPROTKB|P0AFB8 [details] [associations]
symbol:glnG "NtrC transcriptional dual regulator"
species:83333 "Escherichia coli K-12" [GO:0050906 "detection of
stimulus involved in sensory perception" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0009399 "nitrogen fixation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000160 "phosphorelay signal transduction system" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 InterPro:IPR010114
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0009399 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:L19201 eggNOG:COG2204 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 EMBL:X05173
EMBL:D16509 PIR:B30377 RefSeq:NP_418304.1 RefSeq:YP_491582.1
ProteinModelPortal:P0AFB8 SMR:P0AFB8 IntAct:P0AFB8
EnsemblBacteria:EBESCT00000001207 EnsemblBacteria:EBESCT00000001208
EnsemblBacteria:EBESCT00000001209 EnsemblBacteria:EBESCT00000015316
GeneID:12933634 GeneID:948361 KEGG:ecj:Y75_p3318 KEGG:eco:b3868
PATRIC:32123239 EchoBASE:EB0380 EcoGene:EG10385 KO:K07712
OMA:ARGQSNL ProtClustDB:PRK10923 BioCyc:EcoCyc:PROTEIN-NRI
BioCyc:ECOL316407:JW3839-MONOMER BindingDB:P0AFB8 ChEMBL:CHEMBL3552
Genevestigator:P0AFB8 GO:GO:0050906 TIGRFAMs:TIGR01818
Uniprot:P0AFB8
Length = 469
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 7 ENGLQAWKILEDLMDQI-DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMS 65
ENG + +LE L + D++L+++ MP + G+ LL++I +PVI+M++H +
Sbjct: 34 ENGAE---VLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPM--LPVIIMTAHSDLD 88
Query: 66 IVFKCLSKGAVYFLVKPIRKNE 87
+GA +L KP +E
Sbjct: 89 AAVSAYQQGAFDYLPKPFDIDE 110
>UNIPROTKB|Q3ADA5 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_359879.1
ProteinModelPortal:Q3ADA5 STRING:Q3ADA5 GeneID:3726250
KEGG:chy:CHY_1032 PATRIC:21275199 OMA:AGANFYL
BioCyc:CHYD246194:GJCN-1031-MONOMER Uniprot:Q3ADA5
Length = 118
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 8 NGLQAWKILEDLMD-QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
NGL+A LE +++ + DL+ +V MP + G + K+ ++PVI++S+
Sbjct: 32 NGLEA---LEKVLNGEFDLMTVDVNMPKMDGYTFVYKVREMGV--SLPVILISTESKEHD 86
Query: 67 VFKCLSKGAVYFLVKPIRKNEL 88
K L GA +LVKP+ ++
Sbjct: 87 KLKGLQAGATLYLVKPVLPEQI 108
>TIGR_CMR|CHY_1032 [details] [associations]
symbol:CHY_1032 "chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0005622
GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_359879.1
ProteinModelPortal:Q3ADA5 STRING:Q3ADA5 GeneID:3726250
KEGG:chy:CHY_1032 PATRIC:21275199 OMA:AGANFYL
BioCyc:CHYD246194:GJCN-1031-MONOMER Uniprot:Q3ADA5
Length = 118
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 8 NGLQAWKILEDLMD-QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
NGL+A LE +++ + DL+ +V MP + G + K+ ++PVI++S+
Sbjct: 32 NGLEA---LEKVLNGEFDLMTVDVNMPKMDGYTFVYKVREMGV--SLPVILISTESKEHD 86
Query: 67 VFKCLSKGAVYFLVKPIRKNEL 88
K L GA +LVKP+ ++
Sbjct: 87 KLKGLQAGATLYLVKPVLPEQI 108
>TIGR_CMR|APH_0551 [details] [associations]
symbol:APH_0551 "response regulator/GGDEF domain protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:CP000235 GenomeReviews:CP000235_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 KO:K02488 HOGENOM:HOG000167204
ProtClustDB:PRK09581 RefSeq:YP_505143.1 ProteinModelPortal:Q2GKF8
STRING:Q2GKF8 GeneID:3930248 KEGG:aph:APH_0551 PATRIC:20949762
OMA:VERENDF BioCyc:APHA212042:GHPM-575-MONOMER Uniprot:Q2GKF8
Length = 456
Score = 100 (40.3 bits), Expect = 0.00018, P = 0.00018
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI +G +A ++ E+ Q DL+L +V+MP + G + + + IP++M+++ D
Sbjct: 29 VITATSGPEAIRMAEE--HQPDLILLDVMMPGMDGYETCKNMRTNPAIAYIPIVMVTALD 86
Query: 63 SM-SIVFKCLSKGAVYFLVKPI 83
+ S LS GA FL+KPI
Sbjct: 87 NTTSNRVNGLSAGADDFLIKPI 108
>TIGR_CMR|GSU_1250 [details] [associations]
symbol:GSU_1250 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR025662
InterPro:IPR025943 InterPro:IPR025944 PROSITE:PS00675
PROSITE:PS00676 PROSITE:PS00688 HOGENOM:HOG000058487
RefSeq:NP_952303.1 ProteinModelPortal:Q74DR5 GeneID:2688151
KEGG:gsu:GSU1250 PATRIC:22025271 OMA:LQEQEYY ProtClustDB:CLSK828266
BioCyc:GSUL243231:GH27-1278-MONOMER Uniprot:Q74DR5
Length = 469
Score = 100 (40.3 bits), Expect = 0.00019, P = 0.00019
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
V+ +++ Q +LE + V+ ++ MP LSG LL I+ +IP I+M++ D
Sbjct: 34 VVTLQDSRQLMPLLEQ--GGVAAVVLDLFMPHLSGTELLPLIVER--FPHIPAIVMTAVD 89
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
C+ GA +LVKP+ L
Sbjct: 90 ETETAVTCMKSGAFDYLVKPVESGRL 115
>TIGR_CMR|CPS_1932 [details] [associations]
symbol:CPS_1932 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000792 InterPro:IPR001789
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00196 PRINTS:PR00038
PROSITE:PS00622 PROSITE:PS50043 PROSITE:PS50110 SMART:SM00421
SMART:SM00448 GO:GO:0035556 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF46894 eggNOG:COG2197
HOGENOM:HOG000034813 RefSeq:YP_268662.1 ProteinModelPortal:Q483V4
STRING:Q483V4 GeneID:3518655 KEGG:cps:CPS_1932 PATRIC:21467001
OMA:KGEANKQ ProtClustDB:CLSK866931
BioCyc:CPSY167879:GI48-2002-MONOMER Uniprot:Q483V4
Length = 219
Score = 97 (39.2 bits), Expect = 0.00020, P = 0.00020
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 21 DQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLV 80
D+IDL+L ++ MP +S + L + N C PV+++S+ + + LS GAV F+
Sbjct: 47 DEIDLILLDLNMPGMSNLSGLLDLRNQ--CPTTPVVIVSAEQEKQKILQTLSYGAVGFIA 104
Query: 81 KPIRKN 86
K K+
Sbjct: 105 KSSSKD 110
>UNIPROTKB|P06628 [details] [associations]
symbol:spo0F "Sporulation initiation phosphotransferase F"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0005737
GO:GO:0006355 GO:GO:0035556 GO:GO:0046872 GO:GO:0030435
GO:GO:0016301 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 EMBL:Z49782 EMBL:X03497 EMBL:M11081
EMBL:M22039 PIR:A24737 RefSeq:NP_391594.1 PDB:1F51 PDB:1FSP
PDB:1NAT PDB:1PEY PDB:1PUX PDB:1SRR PDB:2FSP PDB:2FTK PDB:2JVI
PDB:2JVJ PDB:2JVK PDB:3Q15 PDBsum:1F51 PDBsum:1FSP PDBsum:1NAT
PDBsum:1PEY PDBsum:1PUX PDBsum:1SRR PDBsum:2FSP PDBsum:2FTK
PDBsum:2JVI PDBsum:2JVJ PDBsum:2JVK PDBsum:3Q15
ProteinModelPortal:P06628 SMR:P06628 DIP:DIP-58965N IntAct:P06628
EnsemblBacteria:EBBACT00000000330 GeneID:937041 KEGG:bsu:BSU37130
PATRIC:18979462 GenoList:BSU37130 KO:K02490 OMA:IRVIIMT
ProtClustDB:CLSK873695 BioCyc:BSUB:BSU37130-MONOMER
BindingDB:P06628 ChEMBL:CHEMBL3857 EvolutionaryTrace:P06628
Uniprot:P06628
Length = 124
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 24/83 (28%), Positives = 49/83 (59%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
NGLQA I+ ++ DLVL ++ +P + GI +L+++ +NI VI+M+++ + ++
Sbjct: 35 NGLQALDIVTK--ERPDLVLLDMKIPGMDGIEILKRMK--VIDENIRVIIMTAYGELDMI 90
Query: 68 FKCLSKGAVYFLVKPIRKNELQN 90
+ GA+ KP +E+++
Sbjct: 91 QESKELGALTHFAKPFDIDEIRD 113
>TIGR_CMR|GSU_2041 [details] [associations]
symbol:GSU_2041 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489 KO:K07714
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_953090.1 ProteinModelPortal:Q74BK0 GeneID:2687998
KEGG:gsu:GSU2041 PATRIC:22026943 OMA:HMLQVML ProtClustDB:CLSK828703
BioCyc:GSUL243231:GH27-1944-MONOMER Uniprot:Q74BK0
Length = 455
Score = 99 (39.9 bits), Expect = 0.00023, P = 0.00023
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPI 83
D +L ++ MP + G+G LR + VIMMS++ ++ C+ +GA ++ KP
Sbjct: 48 DFILCDIRMPIMDGVGFLRTFQKAELPGT--VIMMSAYGTVDAAIACMKEGAYDYVSKPF 105
Query: 84 RKNEL 88
+ +E+
Sbjct: 106 KNDEI 110
>TIGR_CMR|CPS_0397 [details] [associations]
symbol:CPS_0397 "nitrogen regulation protein NR(I)"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006808 "regulation of
nitrogen utilization" evidence=ISS] InterPro:IPR001789
InterPro:IPR002078 InterPro:IPR002197 InterPro:IPR003593
InterPro:IPR009057 InterPro:IPR010114 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0035556
GO:GO:0009399 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
HOGENOM:HOG000058489 InterPro:IPR025662 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
KO:K07712 GO:GO:0050906 TIGRFAMs:TIGR01818 RefSeq:YP_267155.1
ProteinModelPortal:Q489V9 SMR:Q489V9 STRING:Q489V9 GeneID:3520592
KEGG:cps:CPS_0397 PATRIC:21464159 OMA:KELAVEP
BioCyc:CPSY167879:GI48-492-MONOMER Uniprot:Q489V9
Length = 466
Score = 99 (39.9 bits), Expect = 0.00024, P = 0.00024
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 22 QIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVK 81
Q +++++++ MP + G+ LL+++ +K +IPVI+M++H + GA +L K
Sbjct: 47 QPEIIISDIRMPNIDGMELLKRL--NKQHSHIPVIIMTAHSDLDSAVNAYQGGAFEYLPK 104
Query: 82 PIRKNELQNL 91
P +E NL
Sbjct: 105 PFDIDEAINL 114
>TIGR_CMR|GSU_3418 [details] [associations]
symbol:GSU_3418 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR025662
InterPro:IPR025943 InterPro:IPR025944 PROSITE:PS00675
PROSITE:PS00676 PROSITE:PS00688 HOGENOM:HOG000058487
RefSeq:NP_954458.1 ProteinModelPortal:Q746V0 GeneID:2686607
KEGG:gsu:GSU3418 PATRIC:22029693 OMA:LSIYSFP
ProtClustDB:CLSK2522262 BioCyc:GSUL243231:GH27-3392-MONOMER
Uniprot:Q746V0
Length = 490
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
+I + Q IL + ++ L+L ++ MP SG LL+ I + +IPVI++S +
Sbjct: 37 IIKCSDSRQVMDILRET--EVSLILLDLTMPYFSGTDLLQMI--GQEYPDIPVIVLSGLN 92
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNEL 88
+ +C+ GA + VK + K L
Sbjct: 93 QVETAVRCMQLGAFDYYVKTVEKERL 118
>TIGR_CMR|BA_1660 [details] [associations]
symbol:BA_1660 "chemotaxis response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
OMA:PFQAPKV RefSeq:NP_844107.1 RefSeq:YP_018295.1
RefSeq:YP_027808.1 HSSP:Q56312 ProteinModelPortal:Q81SI8 SMR:Q81SI8
DNASU:1083740 EnsemblBacteria:EBBACT00000009828
EnsemblBacteria:EBBACT00000015597 EnsemblBacteria:EBBACT00000020958
GeneID:1083740 GeneID:2817294 GeneID:2851539 KEGG:ban:BA_1660
KEGG:bar:GBAA_1660 KEGG:bat:BAS1541 ProtClustDB:CLSK916318
BioCyc:BANT260799:GJAJ-1613-MONOMER
BioCyc:BANT261594:GJ7F-1681-MONOMER Uniprot:Q81SI8
Length = 122
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 23/82 (28%), Positives = 46/82 (56%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
ENG++A + ++L Q D+V ++ MP + G+ L++I+ K + V++ S+ +
Sbjct: 35 ENGVEAIQKYKEL--QPDIVTLDITMPEMDGLEALKEII--KIDASAKVVICSAMGQQGM 90
Query: 67 VFKCLSKGAVYFLVKPIRKNEL 88
V + GA F+VKP + + +
Sbjct: 91 VLDAIKGGAKDFIVKPFQADRV 112
>TIGR_CMR|SPO_1892 [details] [associations]
symbol:SPO_1892 "C4-dicarboxylate transport
transcriptional regulatory protein DctD" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0015740 "C4-dicarboxylate transport"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000058489 InterPro:IPR025662
InterPro:IPR025944 PROSITE:PS00675 PROSITE:PS00688
RefSeq:YP_167129.1 ProteinModelPortal:Q5LS76 DNASU:3193394
GeneID:3193394 KEGG:sil:SPO1892 PATRIC:23377117 OMA:IDNTMRR
ProtClustDB:CLSK933667 Uniprot:Q5LS76
Length = 444
Score = 98 (39.6 bits), Expect = 0.00028, P = 0.00028
Identities = 19/67 (28%), Positives = 40/67 (59%)
Query: 25 LVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPIR 84
+V++++ MP + G+ L+K+M + ++PVIM++ H + + + + GA FL KP
Sbjct: 51 IVISDIKMPGMDGMQFLKKLMGADS--SLPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
Query: 85 KNELQNL 91
+ + +L
Sbjct: 109 PDRMSDL 115
>TIGR_CMR|GSU_0372 [details] [associations]
symbol:GSU_0372 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 PROSITE:PS00675
PROSITE:PS00676 HSSP:P10957 RefSeq:NP_951431.2 GeneID:2686674
KEGG:gsu:GSU0372 PATRIC:22023488 ProtClustDB:CLSK827784
BioCyc:GSUL243231:GH27-388-MONOMER Uniprot:Q74G75
Length = 455
Score = 98 (39.6 bits), Expect = 0.00029, P = 0.00029
Identities = 23/82 (28%), Positives = 50/82 (60%)
Query: 9 GLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIM--NHKTCKNIPVIMMSSHDSMSI 66
G +A +L++ + D++LT++ M +SG+ LL +++ + + C +IMM++H ++
Sbjct: 35 GQEALALLDER--EFDVILTDLKMQGMSGMELLERLLAADPQQC----IIMMTAHGTVDS 88
Query: 67 VFKCLSKGAVYFLVKPIRKNEL 88
+ + KGA +L KP+ ++ L
Sbjct: 89 AVEAMKKGAFDYLEKPLERDTL 110
>TIGR_CMR|NSE_0512 [details] [associations]
symbol:NSE_0512 "response regulator/GGDEF domain protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG3706 EMBL:CP000237
GenomeReviews:CP000237_GR KO:K02488 HOGENOM:HOG000167204
ProtClustDB:PRK09581 RefSeq:YP_506396.1 ProteinModelPortal:Q2GDQ0
STRING:Q2GDQ0 GeneID:3931788 KEGG:nse:NSE_0512 PATRIC:22681073
OMA:TELGIND BioCyc:NSEN222891:GHFU-532-MONOMER Uniprot:Q2GDQ0
Length = 456
Score = 98 (39.6 bits), Expect = 0.00029, P = 0.00029
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI +G+ A ++ + Q D++L +V+MP + G R++ + +IPVI++++ +
Sbjct: 29 VITASSGIAAIELAKQ--HQPDVILLDVMMPEMDGFETCRRLKSDYATMHIPVIIVTALN 86
Query: 63 SMSIVFKCLSKGAVYFLVKPIR 84
+ + L+ GA FLVKP +
Sbjct: 87 DIENKVEGLNSGADDFLVKPAK 108
>TIGR_CMR|SPO_0132 [details] [associations]
symbol:SPO_0132 "sensor histidine kinase/response
regulator" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936 RefSeq:YP_165404.1
ProteinModelPortal:Q5LWT5 GeneID:3196450 KEGG:sil:SPO0132
PATRIC:23373509 HOGENOM:HOG000250541 OMA:RRLWHSI
ProtClustDB:CLSK933165 Uniprot:Q5LWT5
Length = 739
Score = 100 (40.3 bits), Expect = 0.00034, P = 0.00034
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSG---IGLLRKIMNHKTCKNIPVIMMSSHDSM 64
NGL+A +I +D Q DL+ ++ MP + G G +R++ T +++P++ +++H
Sbjct: 638 NGLEAVEIWQDF--QPDLIFMDISMPKMDGKQATGEIRRL-EAGTGRHVPIVALTAHAMA 694
Query: 65 SIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRKC 99
L+ G +L KP+RK + QH+ C
Sbjct: 695 GDAEGILAAGLDQYLTKPLRKALIH---QHIAEAC 726
>TIGR_CMR|BA_5581 [details] [associations]
symbol:BA_5581 "stage 0 sporulation protein F"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0030436 "asexual sporulation" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016740 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K02490
ProtClustDB:CLSK873695 RefSeq:NP_847737.1 RefSeq:YP_022251.1
RefSeq:YP_031424.1 HSSP:P06628 ProteinModelPortal:Q81JW3 SMR:Q81JW3
DNASU:1085276 EnsemblBacteria:EBBACT00000010293
EnsemblBacteria:EBBACT00000016210 EnsemblBacteria:EBBACT00000023627
GeneID:1085276 GeneID:2814845 GeneID:2853145 KEGG:ban:BA_5581
KEGG:bar:GBAA_5581 KEGG:bat:BAS5185 OMA:EADGAMD
BioCyc:BANT260799:GJAJ-5260-MONOMER
BioCyc:BANT261594:GJ7F-5440-MONOMER Uniprot:Q81JW3
Length = 122
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 22/82 (26%), Positives = 47/82 (57%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
NG QA I++ D DLV+ ++ +P + GI +L+ + + ++I VI+M+++ + ++
Sbjct: 34 NGFQALDIVKK--DNPDLVVLDMKIPGMDGIEILKHVK--EIDESIKVILMTAYGELDMI 89
Query: 68 FKCLSKGAVYFLVKPIRKNELQ 89
+ GA+ KP +E++
Sbjct: 90 QEAKDLGALMHFAKPFDIDEIR 111
>TIGR_CMR|GSU_1293 [details] [associations]
symbol:GSU_1293 "DNA-binding response regulator, LuxR
family" species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000792 InterPro:IPR001789
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00196 PRINTS:PR00038
PROSITE:PS50043 PROSITE:PS50110 SMART:SM00421 SMART:SM00448
GO:GO:0035556 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 SUPFAM:SSF46894 HOGENOM:HOG000034813 HSSP:P10957
RefSeq:NP_952346.1 ProteinModelPortal:Q74DM3 GeneID:2686529
KEGG:gsu:GSU1293 PATRIC:22025359 ProtClustDB:CLSK828286
BioCyc:GSUL243231:GH27-1269-MONOMER Uniprot:Q74DM3
Length = 216
Score = 96 (38.9 bits), Expect = 0.00038, P = 0.00038
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
+NG A + ++DL D D+VL ++ MP ++GI R+I ++ V+ +S H
Sbjct: 35 DNGRAATQCVKDL-DP-DIVLMDLTMPEMNGIDATRRIA--ADYPSVRVLALSMHSDRRF 90
Query: 67 VFKCLSKGAVYFLVKPIRKNELQN 90
+ + LS GA FL+K +EL N
Sbjct: 91 IEEALSAGAQGFLLKDCAFDELVN 114
>TIGR_CMR|SO_4637 [details] [associations]
symbol:SO_4637 "DNA-binding response regulator"
species:211586 "Shewanella oneidensis MR-1" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034815 HSSP:Q9WYN0
RefSeq:NP_720153.1 ProteinModelPortal:Q8E8M6 GeneID:1172218
KEGG:son:SO_4637 PATRIC:23528935 OMA:DCAYHGE ProtClustDB:CLSK907746
Uniprot:Q8E8M6
Length = 222
Score = 96 (38.9 bits), Expect = 0.00041, P = 0.00041
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPI 83
D+++ +++MP L GI ++K+ C N P++ +++ DS+ + G FL KP
Sbjct: 46 DVIIMDIMMPKLDGIRTVKKLREELFC-NTPILFLTARDSLQDKIDSFTSGGDDFLNKPF 104
Query: 84 RKNEL 88
EL
Sbjct: 105 AMEEL 109
>ASPGD|ASPL0000049453 [details] [associations]
symbol:tcsB species:162425 "Emericella nidulans"
[GO:0004673 "protein histidine kinase activity" evidence=IGI;ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IGI;ISS] [GO:0007234 "osmosensory signaling via
phosphorelay pathway" evidence=IGI;ISS] [GO:0006468 "protein
phosphorylation" evidence=IGI;ISS] [GO:0005886 "plasma membrane"
evidence=IGI;ISS] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0005034 "osmosensor activity" evidence=IEA]
[GO:0009927 "histidine phosphotransfer kinase activity"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0006469 "negative regulation of protein kinase
activity" evidence=IEA] [GO:0070795 "positive regulation of
conidiophore development" evidence=IEA] [GO:0070787 "conidiophore
development" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0005887
GO:GO:0006355 EMBL:BN001307 EMBL:AACD01000029 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000161 KO:K11231
OrthoDB:EOG4N8VCT EMBL:AB036054 RefSeq:XP_659404.1
ProteinModelPortal:Q9P4U6 STRING:Q9P4U6
EnsemblFungi:CADANIAT00008448 GeneID:2874961 KEGG:ani:AN1800.2
HOGENOM:HOG000185666 OMA:DQHRILQ Uniprot:Q9P4U6
Length = 1065
Score = 101 (40.6 bits), Expect = 0.00041, P = 0.00041
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQ---IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMS 59
V V++G +A+ ++ M++ DL+ ++ MP L GI R ++ C + P++ +S
Sbjct: 960 VTVVKDGQEAYDTVKANMEEGKVFDLIFMDIQMPNLDGIESTR-LIRQMGC-SAPIVALS 1017
Query: 60 SHDSMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
+ S + C++ G F+ KPIR+ L+ +
Sbjct: 1018 AFSEDSNIKDCMNSGMDMFISKPIRRPALKQV 1049
>UNIPROTKB|Q9P4U6 [details] [associations]
symbol:tcsB "Two-component system protein B" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=IGI] [GO:0000156 "phosphorelay response
regulator activity" evidence=IGI] [GO:0000161 "MAPK cascade
involved in osmosensory signaling pathway" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS] [GO:0023014
"signal transduction by phosphorylation" evidence=IGI]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005887 GO:GO:0006355 EMBL:BN001307 EMBL:AACD01000029
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000161
KO:K11231 OrthoDB:EOG4N8VCT EMBL:AB036054 RefSeq:XP_659404.1
ProteinModelPortal:Q9P4U6 STRING:Q9P4U6
EnsemblFungi:CADANIAT00008448 GeneID:2874961 KEGG:ani:AN1800.2
HOGENOM:HOG000185666 OMA:DQHRILQ Uniprot:Q9P4U6
Length = 1065
Score = 101 (40.6 bits), Expect = 0.00041, P = 0.00041
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQ---IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMS 59
V V++G +A+ ++ M++ DL+ ++ MP L GI R ++ C + P++ +S
Sbjct: 960 VTVVKDGQEAYDTVKANMEEGKVFDLIFMDIQMPNLDGIESTR-LIRQMGC-SAPIVALS 1017
Query: 60 SHDSMSIVFKCLSKGAVYFLVKPIRKNELQNL 91
+ S + C++ G F+ KPIR+ L+ +
Sbjct: 1018 AFSEDSNIKDCMNSGMDMFISKPIRRPALKQV 1049
>TIGR_CMR|CPS_1750 [details] [associations]
symbol:CPS_1750 "transcriptional regulatory protein CpxR"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0009636 "response to
toxic substance" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 KO:K07662 RefSeq:YP_268481.1
ProteinModelPortal:Q484N4 STRING:Q484N4 GeneID:3518457
KEGG:cps:CPS_1750 PATRIC:21466667
BioCyc:CPSY167879:GI48-1820-MONOMER Uniprot:Q484N4
Length = 242
Score = 96 (38.9 bits), Expect = 0.00049, P = 0.00049
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 21 DQIDLVLTEVLMPCLSGIGLLRKIM-NHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFL 79
D DL+L +V+MP L+G +L+ + NHKT P++M+++ + L GA +L
Sbjct: 51 DSFDLILLDVMMPILNGFEVLKALGGNHKT----PILMLTAKGDDNDRILGLELGADDYL 106
Query: 80 VKPIRKNEL 88
KP + EL
Sbjct: 107 AKPFKHREL 115
>TIGR_CMR|SPO_0022 [details] [associations]
symbol:SPO_0022 "response regulator" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR001932 Pfam:PF00072 Pfam:PF07228 PROSITE:PS50110
SMART:SM00331 SMART:SM00448 GO:GO:0003824 GO:GO:0006355
GO:GO:0035556 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008152
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
SUPFAM:SSF81606 RefSeq:YP_165295.1 ProteinModelPortal:Q5LWH9
GeneID:3194721 KEGG:sil:SPO0022 PATRIC:23373275
HOGENOM:HOG000291805 OMA:ERKWGDL ProtClustDB:CLSK933114
Uniprot:Q5LWH9
Length = 445
Score = 97 (39.2 bits), Expect = 0.00073, P = 0.00073
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 3 VIAVENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHD 62
VI E+G +A +I M DLVL++ +MP +SG+ + + I+++S
Sbjct: 67 VIEAESGEEAMEICARAMP--DLVLSDWVMPGMSGVDFCEAFRQLNSDRYCYFILLTSKS 124
Query: 63 SMSIVFKCLSKGAVYFLVKPIRKNELQ 89
+ V + L GA FL+KP+ +EL+
Sbjct: 125 EKNEVAQGLDAGADDFLIKPVSSDELR 151
>TIGR_CMR|GSU_0811 [details] [associations]
symbol:GSU_0811 "nitrogen regulation protein NtrX"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0019740 "nitrogen utilization" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025943 InterPro:IPR025944 PROSITE:PS00676
PROSITE:PS00688 KO:K13599 RefSeq:NP_951868.1
ProteinModelPortal:Q74EZ8 GeneID:2685237 KEGG:gsu:GSU0811
PATRIC:22024383 OMA:DIWMPRL BioCyc:GSUL243231:GH27-761-MONOMER
Uniprot:Q74EZ8
Length = 456
Score = 97 (39.2 bits), Expect = 0.00075, P = 0.00075
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCK-NIPVIMMSSHDSMSI 66
+G++A + ++ D+ DLVL ++ MP L G+ L+++ KT + V+MMS H ++
Sbjct: 34 DGVEALETVQK--DRPDLVLLDIWMPRLDGMETLQRL---KTADPGLTVVMMSGHGTIET 88
Query: 67 VFKCLSKGAVYFLVKPI 83
K GA F+ KP+
Sbjct: 89 AVKSTKMGAFDFIEKPL 105
>DICTYBASE|DDB_G0277883 [details] [associations]
symbol:dhkJ "histidine kinase J" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0004673 "protein histidine kinase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0277883
GO:GO:0016021 GO:GO:0005524 GO:GO:0005615 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0005622 GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P39928 eggNOG:COG0784 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 EMBL:AF362372 RefSeq:XP_642053.2
ProteinModelPortal:Q54YZ9 EnsemblProtists:DDB0215385 GeneID:8621265
KEGG:ddi:DDB_G0277883 OMA:ACGDLSK Uniprot:Q54YZ9
Length = 2062
Score = 101 (40.6 bits), Expect = 0.00084, P = 0.00084
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMN--HKTCKNIPVIMMSSHDSM 64
ENGLQA + + + DL+L +V MP G +I H+ + P+I M++H
Sbjct: 1759 ENGLQA--VASSQLRKFDLILMDVQMPHCGGFEATAQIRKREHEQGIHTPIIAMTAHALA 1816
Query: 65 SIVFKCLSKGAVYFLVKPIRKNELQ 89
KCL G ++ KPI ++L+
Sbjct: 1817 RDRVKCLEAGMDDYISKPINPDQLK 1841
>TIGR_CMR|BA_0585 [details] [associations]
symbol:BA_0585 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034819 SUPFAM:SSF46894 HSSP:P08402 RefSeq:NP_843119.1
RefSeq:YP_017209.1 RefSeq:YP_026832.1 ProteinModelPortal:Q81VB2
DNASU:1087912 EnsemblBacteria:EBBACT00000008912
EnsemblBacteria:EBBACT00000015521 EnsemblBacteria:EBBACT00000021979
GeneID:1087912 GeneID:2818661 GeneID:2851974 KEGG:ban:BA_0585
KEGG:bar:GBAA_0585 KEGG:bat:BAS0554 OMA:YQTDIEY
ProtClustDB:CLSK2305400 BioCyc:BANT260799:GJAJ-614-MONOMER
BioCyc:BANT261594:GJ7F-640-MONOMER Uniprot:Q81VB2
Length = 223
Score = 95 (38.5 bits), Expect = 0.00089, P = 0.00089
Identities = 23/81 (28%), Positives = 46/81 (56%)
Query: 8 NGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIV 67
+GL+A K++E D++L +V+MP + G +I + N+P+IM+++ + +
Sbjct: 33 SGLEALKLIEQ--KDFDIILLDVMMPNMDGWDTCYQI---RQISNVPIIMLTARNQNYDM 87
Query: 68 FKCLSKGAVYFLVKPIRKNEL 88
K L+ GA ++ KP ++ L
Sbjct: 88 VKGLTMGADDYITKPFDEHVL 108
>TIGR_CMR|BA_1312 [details] [associations]
symbol:BA_1312 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_843778.1 RefSeq:YP_017926.1 RefSeq:YP_027483.1
ProteinModelPortal:Q81TG5 DNASU:1086011
EnsemblBacteria:EBBACT00000008055 EnsemblBacteria:EBBACT00000016708
EnsemblBacteria:EBBACT00000023489 GeneID:1086011 GeneID:2814757
GeneID:2850086 KEGG:ban:BA_1312 KEGG:bar:GBAA_1312 KEGG:bat:BAS1213
OMA:WDEAENG ProtClustDB:CLSK916176
BioCyc:BANT260799:GJAJ-1288-MONOMER
BioCyc:BANT261594:GJ7F-1346-MONOMER Uniprot:Q81TG5
Length = 223
Score = 95 (38.5 bits), Expect = 0.00089, P = 0.00089
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 7 ENGLQAWKILEDLMDQIDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSI 66
ENG +A K LE D D V+ +++MP + G+ + ++I KT ++P+I +++
Sbjct: 34 ENGKEALKKLET--DHYDFVVLDIMMPEMDGLSVCKEI--RKT-SDVPIIFLTAKGEEWN 88
Query: 67 VFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
L GA ++VKP EL + V R+
Sbjct: 89 RVNGLRMGADDYIVKPFSPGELIARMEAVLRR 120
>UNIPROTKB|Q3JZR1 [details] [associations]
symbol:csrR "DNA-binding response regulator CsrR"
species:205921 "Streptococcus agalactiae A909" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034815
EMBL:CP000114 RefSeq:YP_330242.1 ProteinModelPortal:Q3JZR1
EnsemblBacteria:EBSTRT00000004344 GeneID:3685998
GenomeReviews:CP000114_GR KEGG:sak:SAK_1639 PATRIC:19634591
OMA:LASVWRY ProtClustDB:CLSK634230
BioCyc:SAGA205921:GHD7-1647-MONOMER Uniprot:Q3JZR1
Length = 229
Score = 95 (38.5 bits), Expect = 0.00095, P = 0.00095
Identities = 25/97 (25%), Positives = 53/97 (54%)
Query: 3 VIAVENGLQAWKILEDLMDQ-IDLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSH 61
V+ NG + L+ +++ DL+L ++++P + G + R++ KT ++MM++
Sbjct: 29 VVVETNGREG---LDTALEKDFDLILLDLMLPEMDGFEITRRLQAEKTTY---IMMMTAR 82
Query: 62 DSMSIVFKCLSKGAVYFLVKPIRKNELQNLWQHVWRK 98
DS+ + L +GA ++VKP EL + ++R+
Sbjct: 83 DSVMDIVAGLDRGADDYIVKPFAIEELLARVRAIFRR 119
>UNIPROTKB|Q9KU11 [details] [associations]
symbol:VC_0719 "DNA-binding response regulator PhoB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR011879 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0006817 HSSP:P08402 KO:K07657 OMA:QVLEMGP
TIGRFAMs:TIGR02154 PIR:H82288 RefSeq:NP_230368.1
ProteinModelPortal:Q9KU11 SMR:Q9KU11 DNASU:2615728 GeneID:2615728
KEGG:vch:VC0719 PATRIC:20080557 ProtClustDB:CLSK874084
Uniprot:Q9KU11
Length = 229
Score = 95 (38.5 bits), Expect = 0.00095, P = 0.00095
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPI 83
DLVL + ++P SGI L++ + + +NIPV+M+++ + L GA ++ KP
Sbjct: 48 DLVLLDWMLPGGSGINLIKHMKREEMTRNIPVVMLTARGEEEDKVRGLEVGADDYITKPF 107
Query: 84 RKNEL 88
EL
Sbjct: 108 SPKEL 112
>TIGR_CMR|VC_0719 [details] [associations]
symbol:VC_0719 "DNA-binding response regulator PhoB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0006817 HSSP:P08402 KO:K07657 OMA:QVLEMGP TIGRFAMs:TIGR02154
PIR:H82288 RefSeq:NP_230368.1 ProteinModelPortal:Q9KU11 SMR:Q9KU11
DNASU:2615728 GeneID:2615728 KEGG:vch:VC0719 PATRIC:20080557
ProtClustDB:CLSK874084 Uniprot:Q9KU11
Length = 229
Score = 95 (38.5 bits), Expect = 0.00095, P = 0.00095
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 24 DLVLTEVLMPCLSGIGLLRKIMNHKTCKNIPVIMMSSHDSMSIVFKCLSKGAVYFLVKPI 83
DLVL + ++P SGI L++ + + +NIPV+M+++ + L GA ++ KP
Sbjct: 48 DLVLLDWMLPGGSGINLIKHMKREEMTRNIPVVMLTARGEEEDKVRGLEVGADDYITKPF 107
Query: 84 RKNEL 88
EL
Sbjct: 108 SPKEL 112
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 162 134 0.00091 102 3 11 22 0.38 31
30 0.44 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 147
No. of states in DFA: 582 (62 KB)
Total size of DFA: 141 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.65u 0.18s 10.83t Elapsed: 00:00:01
Total cpu time: 10.66u 0.18s 10.84t Elapsed: 00:00:01
Start: Fri May 10 10:07:51 2013 End: Fri May 10 10:07:52 2013
WARNINGS ISSUED: 1